Query 018919
Match_columns 349
No_of_seqs 296 out of 2244
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 08:05:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018919.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018919hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 4.4E-77 1.5E-81 569.2 36.1 333 4-336 2-349 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 3.2E-70 1.1E-74 532.6 37.4 336 3-338 26-386 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 6.1E-70 2.1E-74 527.1 36.4 335 2-338 11-363 (368)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 3.3E-68 1.1E-72 516.3 39.5 347 3-349 3-370 (370)
5 1kbi_A Cytochrome B2, L-LCR; f 100.0 1.6E-66 5.6E-71 521.7 38.6 339 2-340 120-484 (511)
6 1p4c_A L(+)-mandelate dehydrog 100.0 7.5E-65 2.6E-69 494.0 37.6 335 3-340 4-359 (380)
7 3sr7_A Isopentenyl-diphosphate 100.0 1.8E-43 6.3E-48 340.0 27.5 272 41-337 54-356 (365)
8 1vcf_A Isopentenyl-diphosphate 100.0 4.7E-42 1.6E-46 328.5 23.3 282 23-334 8-330 (332)
9 1p0k_A Isopentenyl-diphosphate 100.0 3.5E-40 1.2E-44 317.6 27.8 273 40-337 22-329 (349)
10 3vkj_A Isopentenyl-diphosphate 100.0 1.1E-39 3.9E-44 314.6 25.4 274 41-337 27-344 (368)
11 2qr6_A IMP dehydrogenase/GMP r 100.0 7.2E-42 2.4E-46 334.4 6.8 308 15-336 13-392 (393)
12 1ypf_A GMP reductase; GUAC, pu 100.0 3.3E-37 1.1E-41 295.3 24.8 264 35-337 8-325 (336)
13 2c6q_A GMP reductase 2; TIM ba 100.0 1.5E-36 5.3E-41 291.7 18.9 261 36-335 15-343 (351)
14 3r2g_A Inosine 5'-monophosphat 100.0 3.4E-35 1.2E-39 281.4 21.7 253 41-332 8-317 (361)
15 1eep_A Inosine 5'-monophosphat 100.0 4E-32 1.4E-36 266.3 23.7 258 41-337 10-386 (404)
16 3khj_A Inosine-5-monophosphate 100.0 8.5E-27 2.9E-31 224.5 26.2 251 41-332 13-331 (361)
17 3ffs_A Inosine-5-monophosphate 99.9 3E-26 1E-30 222.4 24.5 256 41-332 10-370 (400)
18 4fo4_A Inosine 5'-monophosphat 99.9 2E-26 6.8E-31 221.7 21.2 255 41-332 14-335 (366)
19 2e6f_A Dihydroorotate dehydrog 99.9 2.1E-25 7E-30 211.4 21.9 241 59-333 2-310 (314)
20 4ef8_A Dihydroorotate dehydrog 99.9 4.9E-25 1.7E-29 211.2 23.2 250 50-333 26-343 (354)
21 1jub_A Dihydroorotate dehydrog 99.9 3.9E-25 1.3E-29 209.2 22.2 240 61-333 2-308 (311)
22 4af0_A Inosine-5'-monophosphat 99.9 9.5E-25 3.3E-29 215.3 23.8 140 193-332 310-523 (556)
23 1ea0_A Glutamate synthase [NAD 99.9 5.1E-25 1.7E-29 238.1 23.1 279 39-330 821-1162(1479)
24 1gte_A Dihydropyrimidine dehyd 99.9 1.2E-24 4.2E-29 235.3 24.7 249 54-331 526-851 (1025)
25 3i65_A Dihydroorotate dehydrog 99.9 9.1E-24 3.1E-28 205.1 25.0 244 56-334 79-412 (415)
26 1ofd_A Ferredoxin-dependent gl 99.9 6.2E-24 2.1E-28 230.1 24.0 282 40-334 839-1202(1520)
27 3zwt_A Dihydroorotate dehydrog 99.9 3.1E-23 1.1E-27 199.9 24.5 251 48-333 38-364 (367)
28 3oix_A Putative dihydroorotate 99.9 3.3E-23 1.1E-27 198.0 23.7 242 58-332 35-340 (345)
29 3usb_A Inosine-5'-monophosphat 99.9 6.9E-23 2.4E-27 205.9 26.9 140 193-332 285-481 (511)
30 1ep3_A Dihydroorotate dehydrog 99.9 1.9E-23 6.6E-28 197.2 20.5 241 57-333 3-306 (311)
31 4avf_A Inosine-5'-monophosphat 99.9 1.4E-22 4.7E-27 202.8 27.8 140 193-332 258-459 (490)
32 1vhn_A Putative flavin oxidore 99.9 2E-24 6.9E-29 205.1 13.5 241 69-336 2-274 (318)
33 4fxs_A Inosine-5'-monophosphat 99.9 1.6E-22 5.4E-27 202.5 23.4 166 139-332 233-458 (496)
34 1tv5_A Dhodehase, dihydroorota 99.9 4.8E-22 1.6E-26 195.4 25.8 253 46-334 68-440 (443)
35 1me8_A Inosine-5'-monophosphat 99.9 1.8E-22 6.3E-27 202.7 23.1 139 193-331 271-471 (503)
36 1f76_A Dihydroorotate dehydrog 99.9 8.6E-22 2.9E-26 188.3 22.9 209 58-293 42-323 (336)
37 1vrd_A Inosine-5'-monophosphat 99.9 5E-21 1.7E-25 192.0 26.1 144 190-333 262-463 (494)
38 3b0p_A TRNA-dihydrouridine syn 99.9 1.1E-20 3.8E-25 181.5 25.3 243 70-336 2-282 (350)
39 3tjx_A Dihydroorotate dehydrog 99.9 9E-21 3.1E-25 182.5 23.6 245 55-333 31-343 (354)
40 1jcn_A Inosine monophosphate d 99.9 1.2E-20 4.2E-25 190.1 25.4 142 189-332 279-482 (514)
41 1zfj_A Inosine monophosphate d 99.9 1.1E-20 3.8E-25 189.3 23.6 146 190-335 258-464 (491)
42 2cu0_A Inosine-5'-monophosphat 99.8 7.3E-20 2.5E-24 183.2 21.0 139 193-334 257-455 (486)
43 2gjl_A Hypothetical protein PA 99.8 5E-18 1.7E-22 161.6 23.6 195 63-302 9-215 (328)
44 3bo9_A Putative nitroalkan dio 99.8 8.2E-18 2.8E-22 160.0 22.8 186 69-301 24-218 (326)
45 2z6i_A Trans-2-enoyl-ACP reduc 99.8 6.1E-18 2.1E-22 161.3 20.5 183 64-295 7-198 (332)
46 3bw2_A 2-nitropropane dioxygen 99.7 1.6E-16 5.6E-21 153.6 23.5 183 71-294 10-243 (369)
47 1z41_A YQJM, probable NADH-dep 99.7 2.5E-15 8.5E-20 143.6 21.6 221 62-293 8-312 (338)
48 3gr7_A NADPH dehydrogenase; fl 99.6 3.5E-13 1.2E-17 128.7 24.2 223 61-293 7-312 (340)
49 2gou_A Oxidoreductase, FMN-bin 99.6 6.9E-14 2.3E-18 134.8 19.0 218 62-293 8-327 (365)
50 1vyr_A Pentaerythritol tetrani 99.6 1.6E-13 5.4E-18 132.3 20.7 219 62-293 8-328 (364)
51 2r14_A Morphinone reductase; H 99.6 5.3E-14 1.8E-18 136.1 17.3 218 62-293 14-333 (377)
52 2uva_G Fatty acid synthase bet 99.6 2.3E-14 7.9E-19 162.2 15.3 210 48-297 558-804 (2060)
53 3q58_A N-acetylmannosamine-6-p 99.5 2.1E-13 7E-18 123.2 16.1 178 83-293 31-215 (229)
54 2hsa_B 12-oxophytodienoate red 99.5 8.2E-13 2.8E-17 128.8 21.3 146 137-293 172-353 (402)
55 3hgj_A Chromate reductase; TIM 99.5 3.4E-12 1.2E-16 122.3 24.0 145 139-293 155-323 (349)
56 3igs_A N-acetylmannosamine-6-p 99.5 7.7E-13 2.6E-17 119.7 18.4 178 83-293 31-215 (232)
57 1icp_A OPR1, 12-oxophytodienoa 99.5 6.1E-13 2.1E-17 128.6 17.8 146 137-293 168-335 (376)
58 3kru_A NADH:flavin oxidoreduct 99.5 7.5E-12 2.6E-16 119.4 22.0 213 62-293 7-312 (343)
59 1y0e_A Putative N-acetylmannos 99.5 5.5E-12 1.9E-16 112.9 19.4 173 88-292 23-208 (223)
60 1ps9_A 2,4-dienoyl-COA reducta 99.4 5.8E-12 2E-16 130.5 19.5 222 62-293 8-315 (671)
61 3l5a_A NADH/flavin oxidoreduct 99.4 9.7E-12 3.3E-16 121.7 18.9 146 139-293 173-351 (419)
62 3l5l_A Xenobiotic reductase A; 99.4 3.6E-11 1.2E-15 115.7 21.9 145 139-293 161-330 (363)
63 1o94_A Tmadh, trimethylamine d 99.4 1.1E-11 3.7E-16 129.7 19.4 221 62-293 12-326 (729)
64 3k30_A Histamine dehydrogenase 99.4 2.4E-11 8.2E-16 126.3 20.3 221 62-293 17-329 (690)
65 3gka_A N-ethylmaleimide reduct 99.3 9E-11 3.1E-15 112.7 20.2 136 139-293 164-321 (361)
66 4ab4_A Xenobiotic reductase B; 99.3 9.6E-11 3.3E-15 112.5 19.7 136 139-293 156-313 (362)
67 1xm3_A Thiazole biosynthesis p 99.3 6E-10 2E-14 102.6 24.3 198 62-293 3-212 (264)
68 3nav_A Tryptophan synthase alp 99.3 3.3E-10 1.1E-14 104.5 19.1 170 133-316 31-267 (271)
69 3vnd_A TSA, tryptophan synthas 99.2 2.1E-10 7.1E-15 105.6 16.5 169 134-316 30-265 (267)
70 1mzh_A Deoxyribose-phosphate a 99.2 8.2E-11 2.8E-15 105.9 13.0 124 139-290 73-206 (225)
71 1yxy_A Putative N-acetylmannos 99.2 7.3E-10 2.5E-14 99.9 19.3 177 85-292 31-219 (234)
72 2uv8_G Fatty acid synthase sub 99.2 1E-10 3.5E-15 132.1 15.6 206 48-295 565-809 (2051)
73 1rd5_A Tryptophan synthase alp 99.2 2E-09 6.8E-14 98.8 20.3 173 135-316 31-259 (262)
74 1qop_A Tryptophan synthase alp 99.2 2.2E-09 7.5E-14 99.0 20.0 168 132-316 25-264 (268)
75 1wv2_A Thiazole moeity, thiazo 99.1 9.1E-09 3.1E-13 92.9 22.2 197 62-293 10-221 (265)
76 1wa3_A 2-keto-3-deoxy-6-phosph 99.1 2E-09 6.7E-14 95.0 16.3 129 132-293 18-183 (205)
77 4adt_A Pyridoxine biosynthetic 99.1 4E-10 1.4E-14 105.1 10.7 107 203-318 124-262 (297)
78 1geq_A Tryptophan synthase alp 99.1 4.6E-09 1.6E-13 95.4 17.2 163 133-314 14-245 (248)
79 2zbt_A Pyridoxal biosynthesis 99.1 3.2E-10 1.1E-14 106.1 9.0 198 91-333 31-277 (297)
80 3tsm_A IGPS, indole-3-glycerol 99.1 1.1E-08 3.6E-13 94.3 18.6 165 91-293 82-254 (272)
81 3qja_A IGPS, indole-3-glycerol 99.1 2.8E-09 9.4E-14 98.5 14.7 165 91-293 75-247 (272)
82 3zen_D Fatty acid synthase; tr 99.0 3.3E-10 1.1E-14 132.1 10.4 210 47-296 402-654 (3089)
83 2nv1_A Pyridoxal biosynthesis 99.0 4.4E-10 1.5E-14 105.6 7.7 78 245-330 195-274 (305)
84 2ekc_A AQ_1548, tryptophan syn 99.0 1.8E-08 6E-13 92.6 18.2 145 134-296 29-242 (262)
85 3o07_A Pyridoxine biosynthesis 99.0 1.2E-08 4.2E-13 92.8 16.6 166 90-293 20-234 (291)
86 3aty_A Tcoye, prostaglandin F2 99.0 3.8E-09 1.3E-13 102.1 13.3 139 140-293 178-341 (379)
87 2qjg_A Putative aldolase MJ040 98.9 8.5E-09 2.9E-13 95.0 13.2 180 69-293 31-242 (273)
88 3oa3_A Aldolase; structural ge 98.9 7.9E-08 2.7E-12 88.6 18.8 172 91-289 77-264 (288)
89 2v82_A 2-dehydro-3-deoxy-6-pho 98.9 2.6E-08 8.8E-13 88.3 15.1 115 194-320 92-206 (212)
90 1yad_A Regulatory protein TENI 98.9 6E-08 2E-12 86.5 15.9 94 194-293 102-197 (221)
91 2htm_A Thiazole biosynthesis p 98.9 2.4E-07 8.1E-12 83.9 19.4 197 63-293 4-212 (268)
92 3tha_A Tryptophan synthase alp 98.9 9E-09 3.1E-13 93.6 10.2 152 133-301 25-240 (252)
93 1thf_D HISF protein; thermophI 98.9 5.4E-08 1.8E-12 88.4 15.3 76 215-293 154-229 (253)
94 1pii_A N-(5'phosphoribosyl)ant 98.8 4.9E-08 1.7E-12 95.9 15.7 190 91-330 71-269 (452)
95 3tdn_A FLR symmetric alpha-bet 98.8 6.8E-09 2.3E-13 94.3 8.8 130 137-293 36-234 (247)
96 1vc4_A Indole-3-glycerol phosp 98.8 2.9E-08 1E-12 90.7 12.8 128 138-293 67-241 (254)
97 1i4n_A Indole-3-glycerol phosp 98.8 1.1E-07 3.6E-12 86.6 16.0 162 91-293 64-235 (251)
98 4e38_A Keto-hydroxyglutarate-a 98.8 8.5E-08 2.9E-12 86.2 14.5 153 129-292 39-206 (232)
99 2yzr_A Pyridoxal biosynthesis 98.8 1E-07 3.6E-12 89.0 15.1 45 247-293 230-276 (330)
100 2y88_A Phosphoribosyl isomeras 98.8 3E-08 1E-12 89.6 11.2 76 215-293 152-230 (244)
101 4a3u_A NCR, NADH\:flavin oxido 98.8 3.2E-07 1.1E-11 88.0 18.6 145 138-293 154-320 (358)
102 3f4w_A Putative hexulose 6 pho 98.8 2E-07 6.7E-12 82.4 15.7 185 88-315 13-208 (211)
103 3ngj_A Deoxyribose-phosphate a 98.8 7.5E-08 2.6E-12 86.6 12.9 169 91-289 46-230 (239)
104 1ka9_F Imidazole glycerol phos 98.8 5.2E-08 1.8E-12 88.4 12.1 76 215-293 155-230 (252)
105 1h5y_A HISF; histidine biosynt 98.8 9.5E-08 3.2E-12 86.2 13.7 76 215-293 157-232 (253)
106 1ujp_A Tryptophan synthase alp 98.8 1.3E-07 4.4E-12 87.3 14.7 159 134-318 28-253 (271)
107 2w6r_A Imidazole glycerol phos 98.8 2.2E-07 7.4E-12 85.1 16.1 76 215-293 159-234 (266)
108 3ovp_A Ribulose-phosphate 3-ep 98.7 5.6E-07 1.9E-11 80.9 17.6 157 133-321 14-224 (228)
109 1vzw_A Phosphoribosyl isomeras 98.7 5.1E-08 1.7E-12 88.2 10.8 74 215-293 149-227 (244)
110 1jvn_A Glutamine, bifunctional 98.7 9.3E-08 3.2E-12 96.8 12.4 76 215-293 455-531 (555)
111 1qo2_A Molecule: N-((5-phospho 98.7 1E-07 3.5E-12 86.1 10.8 75 216-293 148-228 (241)
112 3tjl_A NADPH dehydrogenase; OL 98.7 2.8E-08 9.7E-13 96.4 7.4 147 138-293 170-351 (407)
113 2yw3_A 4-hydroxy-2-oxoglutarat 98.7 1.1E-06 3.9E-11 77.7 17.1 89 195-293 96-184 (207)
114 3ndo_A Deoxyribose-phosphate a 98.7 2.5E-07 8.7E-12 82.9 12.9 170 91-289 32-220 (231)
115 3r12_A Deoxyribose-phosphate a 98.6 3.1E-07 1.1E-11 83.5 13.2 169 91-289 62-246 (260)
116 2tps_A Protein (thiamin phosph 98.6 4.4E-07 1.5E-11 80.9 13.5 95 196-293 107-205 (227)
117 3inp_A D-ribulose-phosphate 3- 98.6 1.3E-06 4.5E-11 79.2 16.5 151 133-314 37-243 (246)
118 2fli_A Ribulose-phosphate 3-ep 98.6 1.2E-06 4.1E-11 77.7 15.5 151 132-314 12-218 (220)
119 1ub3_A Aldolase protein; schif 98.6 5.4E-07 1.8E-11 80.4 13.0 167 91-287 22-204 (220)
120 1xi3_A Thiamine phosphate pyro 98.6 1.2E-06 4.2E-11 77.1 15.2 79 212-293 115-195 (215)
121 2p10_A MLL9387 protein; putati 98.6 4.9E-06 1.7E-10 76.1 18.9 213 71-315 27-279 (286)
122 3jr2_A Hexulose-6-phosphate sy 98.6 3.5E-07 1.2E-11 81.5 11.3 183 88-315 19-214 (218)
123 4a29_A Engineered retro-aldol 98.6 1.2E-06 4.2E-11 79.1 14.6 121 141-293 118-238 (258)
124 1rpx_A Protein (ribulose-phosp 98.6 2E-06 6.7E-11 77.1 16.0 169 90-293 25-212 (230)
125 1vhc_A Putative KHG/KDPG aldol 98.5 1.1E-06 3.9E-11 78.6 13.9 90 193-293 100-190 (224)
126 3o63_A Probable thiamine-phosp 98.5 8E-07 2.7E-11 80.6 12.6 82 211-293 141-224 (243)
127 1tqj_A Ribulose-phosphate 3-ep 98.5 9.7E-07 3.3E-11 79.4 12.0 135 133-293 14-206 (230)
128 3lab_A Putative KDPG (2-keto-3 98.5 3.3E-06 1.1E-10 74.8 14.6 116 127-287 16-138 (217)
129 1w8s_A FBP aldolase, fructose- 98.5 1E-05 3.5E-10 74.1 18.4 164 91-293 44-236 (263)
130 1h1y_A D-ribulose-5-phosphate 98.5 9.7E-06 3.3E-10 72.6 17.9 183 91-315 22-222 (228)
131 4gj1_A 1-(5-phosphoribosyl)-5- 98.5 1.2E-06 4E-11 79.5 11.7 128 139-293 34-229 (243)
132 1wbh_A KHG/KDPG aldolase; lyas 98.4 4.5E-06 1.5E-10 74.2 14.0 89 195-293 100-189 (214)
133 2agk_A 1-(5-phosphoribosyl)-5- 98.4 5.1E-07 1.8E-11 82.7 7.9 170 91-291 41-239 (260)
134 1mxs_A KDPG aldolase; 2-keto-3 98.4 2.8E-06 9.6E-11 76.1 12.1 88 195-293 110-199 (225)
135 3lab_A Putative KDPG (2-keto-3 98.4 1E-05 3.4E-10 71.7 15.1 159 86-292 23-191 (217)
136 4gbu_A NADPH dehydrogenase 1; 98.4 1.1E-05 3.7E-10 78.4 16.7 146 138-293 174-353 (400)
137 1n7k_A Deoxyribose-phosphate a 98.3 6.3E-06 2.2E-10 74.0 12.3 164 91-288 39-221 (234)
138 3ctl_A D-allulose-6-phosphate 98.3 1.5E-05 5E-10 71.7 14.6 151 133-315 10-218 (231)
139 3tdn_A FLR symmetric alpha-bet 98.3 3.7E-06 1.3E-10 76.1 10.7 76 214-292 37-112 (247)
140 1vcv_A Probable deoxyribose-ph 98.3 5.6E-05 1.9E-09 67.5 18.0 171 91-288 20-220 (226)
141 2f6u_A GGGPS, (S)-3-O-geranylg 98.3 6.4E-06 2.2E-10 74.0 11.6 72 214-293 147-223 (234)
142 3ajx_A 3-hexulose-6-phosphate 98.2 1.4E-05 4.9E-10 70.0 12.6 166 88-293 13-191 (207)
143 3glc_A Aldolase LSRF; TIM barr 98.2 6E-05 2.1E-09 70.0 16.9 115 141-293 130-262 (295)
144 3s1x_A Probable transaldolase; 98.2 0.00016 5.3E-09 64.3 18.3 186 90-310 9-212 (223)
145 3r8r_A Transaldolase; pentose 98.2 0.00037 1.3E-08 61.4 20.2 186 90-310 9-210 (212)
146 1wv2_A Thiazole moeity, thiazo 98.1 1.2E-05 4.2E-10 72.5 10.5 138 93-233 65-217 (265)
147 3exr_A RMPD (hexulose-6-phosph 98.1 3.5E-05 1.2E-09 68.8 12.5 165 113-316 48-218 (221)
148 1q6o_A Humps, 3-keto-L-gulonat 98.1 0.00014 4.9E-09 64.2 16.5 158 113-315 46-212 (216)
149 2czd_A Orotidine 5'-phosphate 98.1 5E-05 1.7E-09 66.9 13.3 154 111-314 40-205 (208)
150 1ka9_F Imidazole glycerol phos 98.0 2.8E-05 9.7E-10 70.2 11.4 76 215-293 34-109 (252)
151 1p1x_A Deoxyribose-phosphate a 98.0 2.8E-05 9.5E-10 70.9 11.2 122 135-283 84-222 (260)
152 1thf_D HISF protein; thermophI 98.0 3.3E-05 1.1E-09 69.8 11.4 76 215-293 33-108 (253)
153 2a4a_A Deoxyribose-phosphate a 98.0 2.8E-05 9.6E-10 71.5 10.7 124 135-283 105-249 (281)
154 1xg4_A Probable methylisocitra 98.0 0.00033 1.1E-08 65.0 17.7 178 90-294 26-241 (295)
155 3vk5_A MOEO5; TIM barrel, tran 98.0 2.1E-05 7E-10 72.1 8.7 70 218-293 192-261 (286)
156 1h5y_A HISF; histidine biosynt 97.9 8.2E-05 2.8E-09 66.6 12.4 77 214-293 35-111 (253)
157 1qap_A Quinolinic acid phospho 97.9 9.2E-05 3.1E-09 68.8 12.3 86 194-291 197-283 (296)
158 2b7n_A Probable nicotinate-nuc 97.9 3.7E-05 1.3E-09 70.8 9.0 87 194-292 170-261 (273)
159 3vzx_A Heptaprenylglyceryl pho 97.9 0.00011 3.9E-09 65.5 11.6 67 219-293 147-213 (228)
160 1tqx_A D-ribulose-5-phosphate 97.9 0.00054 1.9E-08 61.2 16.0 159 114-315 55-222 (227)
161 2yw3_A 4-hydroxy-2-oxoglutarat 97.9 0.00024 8.3E-09 62.6 13.5 109 133-287 22-130 (207)
162 3iv3_A Tagatose 1,6-diphosphat 97.8 0.00032 1.1E-08 66.0 14.5 165 141-333 115-318 (332)
163 1to3_A Putative aldolase YIHT; 97.8 0.00038 1.3E-08 65.0 15.0 124 140-293 112-259 (304)
164 2h6r_A Triosephosphate isomera 97.8 0.00019 6.4E-09 63.8 12.1 96 196-293 104-204 (219)
165 2y88_A Phosphoribosyl isomeras 97.8 0.00013 4.3E-09 65.5 11.0 76 214-293 33-108 (244)
166 1qo2_A Molecule: N-((5-phospho 97.8 2.2E-05 7.6E-10 70.6 5.8 75 215-293 33-107 (241)
167 3ceu_A Thiamine phosphate pyro 97.8 4.9E-05 1.7E-09 67.1 7.8 81 211-293 94-177 (210)
168 2qr6_A IMP dehydrogenase/GMP r 97.8 9.2E-05 3.2E-09 71.6 9.9 97 189-289 140-240 (393)
169 2w6r_A Imidazole glycerol phos 97.8 4.6E-05 1.6E-09 69.4 7.3 76 214-292 32-107 (266)
170 1vzw_A Phosphoribosyl isomeras 97.7 0.00014 4.8E-09 65.3 10.4 75 215-293 35-109 (244)
171 3cu2_A Ribulose-5-phosphate 3- 97.7 9.8E-05 3.4E-09 66.5 9.2 125 139-293 82-222 (237)
172 3qja_A IGPS, indole-3-glycerol 97.7 0.00071 2.4E-08 62.1 15.1 115 139-289 75-190 (272)
173 1x1o_A Nicotinate-nucleotide p 97.7 0.00036 1.2E-08 64.4 12.7 86 195-292 185-272 (286)
174 2jbm_A Nicotinate-nucleotide p 97.7 7.5E-05 2.6E-09 69.6 8.1 86 194-291 185-275 (299)
175 3cwo_X Beta/alpha-barrel prote 97.7 0.00014 4.8E-09 63.9 9.6 76 215-293 133-208 (237)
176 1vpx_A Protein (transaldolase 97.7 0.004 1.4E-07 55.5 18.8 164 114-312 55-223 (230)
177 3q58_A N-acetylmannosamine-6-p 97.7 0.00083 2.8E-08 60.1 14.3 110 134-287 34-155 (229)
178 3igs_A N-acetylmannosamine-6-p 97.6 0.00096 3.3E-08 59.8 14.2 110 134-287 34-155 (232)
179 3tqv_A Nicotinate-nucleotide p 97.6 0.00035 1.2E-08 64.3 10.6 87 194-292 187-274 (287)
180 1y0e_A Putative N-acetylmannos 97.6 0.0017 5.9E-08 57.2 14.8 118 134-291 21-149 (223)
181 4eiv_A Deoxyribose-phosphate a 97.6 0.0019 6.5E-08 59.3 15.1 124 135-283 99-256 (297)
182 3tsm_A IGPS, indole-3-glycerol 97.6 0.0017 5.8E-08 59.5 14.8 116 138-289 81-197 (272)
183 3l0g_A Nicotinate-nucleotide p 97.5 0.00051 1.7E-08 63.5 10.6 86 194-291 196-282 (300)
184 1viz_A PCRB protein homolog; s 97.5 0.00023 7.9E-09 64.1 8.0 72 214-293 140-215 (240)
185 3c2e_A Nicotinate-nucleotide p 97.5 9.8E-05 3.3E-09 68.6 5.4 86 194-291 187-280 (294)
186 1l6w_A Fructose-6-phosphate al 97.5 0.0067 2.3E-07 53.8 16.8 148 115-297 44-196 (220)
187 3paj_A Nicotinate-nucleotide p 97.5 0.001 3.5E-08 62.1 11.9 86 194-291 220-306 (320)
188 3gnn_A Nicotinate-nucleotide p 97.4 0.00051 1.7E-08 63.6 9.6 85 194-290 198-283 (298)
189 3kts_A Glycerol uptake operon 97.4 0.00019 6.6E-09 62.2 6.3 89 194-294 92-185 (192)
190 3ih1_A Methylisocitrate lyase; 97.4 0.007 2.4E-07 56.3 17.3 178 90-294 38-249 (305)
191 4e38_A Keto-hydroxyglutarate-a 97.4 0.00081 2.8E-08 60.2 10.5 80 193-287 73-153 (232)
192 1ypf_A GMP reductase; GUAC, pu 97.4 0.0012 4.1E-08 62.4 12.1 129 102-288 47-177 (336)
193 2pgw_A Muconate cycloisomerase 97.4 0.0045 1.5E-07 59.4 16.1 120 133-291 146-274 (384)
194 3nl6_A Thiamine biosynthetic b 97.4 0.0014 4.9E-08 65.8 12.9 81 212-293 115-214 (540)
195 1hg3_A Triosephosphate isomera 97.4 0.0011 3.7E-08 59.1 10.7 40 254-293 171-210 (225)
196 1o4u_A Type II quinolic acid p 97.4 0.00025 8.7E-09 65.4 6.6 86 194-291 181-271 (285)
197 1wx0_A Transaldolase; structur 97.3 0.006 2E-07 54.2 14.8 147 116-297 54-203 (223)
198 1qpo_A Quinolinate acid phosph 97.3 0.00093 3.2E-08 61.6 9.5 86 194-291 183-272 (284)
199 3khj_A Inosine-5-monophosphate 97.3 0.0017 6E-08 61.9 11.5 89 193-288 84-173 (361)
200 4gj1_A 1-(5-phosphoribosyl)-5- 97.2 0.00075 2.6E-08 60.9 8.1 74 216-292 35-108 (243)
201 3kts_A Glycerol uptake operon 97.2 0.0036 1.2E-07 54.2 11.7 102 97-234 78-181 (192)
202 2ovl_A Putative racemase; stru 97.2 0.0051 1.8E-07 58.7 13.8 118 134-289 146-273 (371)
203 3ve9_A Orotidine-5'-phosphate 97.2 0.00084 2.9E-08 59.4 7.5 86 216-319 119-205 (215)
204 1yxy_A Putative N-acetylmannos 97.2 0.0068 2.3E-07 53.8 13.5 110 137-285 37-157 (234)
205 1mdl_A Mandelate racemase; iso 97.2 0.0026 8.7E-08 60.5 11.3 119 133-289 143-271 (359)
206 3o07_A Pyridoxine biosynthesis 97.1 0.00056 1.9E-08 62.3 6.2 120 139-287 21-141 (291)
207 3iwp_A Copper homeostasis prot 97.1 0.0049 1.7E-07 56.5 12.3 122 134-288 109-238 (287)
208 3m47_A Orotidine 5'-phosphate 97.1 0.02 6.8E-07 51.0 15.7 82 217-316 142-224 (228)
209 3w01_A Heptaprenylglyceryl pho 97.1 0.0017 5.9E-08 58.0 8.5 62 224-293 158-219 (235)
210 4dbe_A Orotidine 5'-phosphate 97.0 0.0024 8.3E-08 56.7 8.9 88 215-320 125-213 (222)
211 1s2w_A Phosphoenolpyruvate pho 97.0 0.039 1.3E-06 51.0 17.3 182 90-294 28-244 (295)
212 2bdq_A Copper homeostasis prot 97.0 0.017 5.7E-07 51.1 13.9 128 130-288 70-207 (224)
213 1w0m_A TIM, triosephosphate is 96.9 0.03 1E-06 49.8 15.4 88 203-293 113-207 (226)
214 3eb2_A Putative dihydrodipicol 96.9 0.21 7.1E-06 46.1 21.9 180 72-291 9-211 (300)
215 4a29_A Engineered retro-aldol 96.9 0.019 6.4E-07 51.8 14.1 87 193-288 93-180 (258)
216 3si9_A DHDPS, dihydrodipicolin 96.9 0.26 8.9E-06 45.8 23.2 180 72-291 27-230 (315)
217 2vc6_A MOSA, dihydrodipicolina 96.9 0.25 8.5E-06 45.4 22.7 178 73-291 7-208 (292)
218 1vhc_A Putative KHG/KDPG aldol 96.9 0.0055 1.9E-07 54.5 10.3 111 132-287 25-136 (224)
219 1xky_A Dihydrodipicolinate syn 96.9 0.23 7.8E-06 45.9 21.8 181 73-293 18-221 (301)
220 3eoo_A Methylisocitrate lyase; 96.9 0.087 3E-06 48.7 18.7 179 90-294 31-245 (298)
221 1zlp_A PSR132, petal death pro 96.9 0.057 1.9E-06 50.4 17.5 179 90-294 48-263 (318)
222 3nvt_A 3-deoxy-D-arabino-heptu 96.9 0.03 1E-06 53.7 16.1 206 56-291 124-349 (385)
223 4adt_A Pyridoxine biosynthetic 96.9 0.0029 9.9E-08 58.7 8.6 119 140-288 32-152 (297)
224 3lye_A Oxaloacetate acetyl hyd 96.9 0.026 9E-07 52.4 15.0 189 73-294 25-253 (307)
225 3nav_A Tryptophan synthase alp 96.9 0.0046 1.6E-07 56.6 9.8 40 193-232 197-237 (271)
226 3na8_A Putative dihydrodipicol 96.9 0.29 1E-05 45.5 24.0 179 72-290 29-231 (315)
227 1jvn_A Glutamine, bifunctional 96.9 0.0014 4.8E-08 66.2 6.8 76 216-293 284-372 (555)
228 1wbh_A KHG/KDPG aldolase; lyas 96.9 0.0056 1.9E-07 54.0 9.9 114 129-287 21-135 (214)
229 3flu_A DHDPS, dihydrodipicolin 96.8 0.14 4.8E-06 47.2 19.6 179 73-291 13-214 (297)
230 1nu5_A Chloromuconate cycloiso 96.8 0.043 1.5E-06 52.1 16.6 121 133-291 141-272 (370)
231 3h5d_A DHDPS, dihydrodipicolin 96.8 0.23 8E-06 46.1 21.2 180 73-292 13-215 (311)
232 2rdx_A Mandelate racemase/muco 96.8 0.0071 2.4E-07 57.9 11.1 115 133-289 144-268 (379)
233 4fo4_A Inosine 5'-monophosphat 96.8 0.0078 2.7E-07 57.5 10.9 90 193-288 85-177 (366)
234 2yyu_A Orotidine 5'-phosphate 96.8 0.055 1.9E-06 48.6 16.0 75 221-315 152-236 (246)
235 2ehh_A DHDPS, dihydrodipicolin 96.7 0.16 5.6E-06 46.7 19.4 178 73-291 7-208 (294)
236 2hzg_A Mandelate racemase/muco 96.7 0.066 2.2E-06 51.5 17.3 123 133-291 144-280 (401)
237 3tak_A DHDPS, dihydrodipicolin 96.7 0.2 6.7E-06 46.1 19.8 179 73-291 7-208 (291)
238 2og9_A Mandelate racemase/muco 96.7 0.032 1.1E-06 53.6 14.9 119 134-290 162-290 (393)
239 2qgy_A Enolase from the enviro 96.7 0.012 4.2E-07 56.5 12.0 118 133-288 148-275 (391)
240 1rvk_A Isomerase/lactonizing e 96.7 0.055 1.9E-06 51.6 16.5 127 133-291 148-285 (382)
241 3qze_A DHDPS, dihydrodipicolin 96.7 0.39 1.3E-05 44.6 23.6 180 72-291 28-230 (314)
242 1i4n_A Indole-3-glycerol phosp 96.7 0.033 1.1E-06 50.3 13.8 88 193-289 90-179 (251)
243 1mxs_A KDPG aldolase; 2-keto-3 96.6 0.0044 1.5E-07 55.2 7.7 111 132-287 34-145 (225)
244 3ru6_A Orotidine 5'-phosphate 96.6 0.066 2.3E-06 49.6 15.8 64 216-293 162-235 (303)
245 2p8b_A Mandelate racemase/muco 96.6 0.032 1.1E-06 53.0 14.0 120 133-291 140-270 (369)
246 2nql_A AGR_PAT_674P, isomerase 96.6 0.013 4.5E-07 56.2 11.3 120 133-290 163-291 (388)
247 3daq_A DHDPS, dihydrodipicolin 96.6 0.13 4.3E-06 47.4 17.4 177 73-290 9-209 (292)
248 1zco_A 2-dehydro-3-deoxyphosph 96.6 0.09 3.1E-06 47.7 16.0 202 60-291 10-230 (262)
249 1vkf_A Glycerol uptake operon 96.5 0.0023 7.9E-08 55.1 4.7 36 258-294 148-183 (188)
250 3vnd_A TSA, tryptophan synthas 96.5 0.0096 3.3E-07 54.4 9.1 40 193-232 195-235 (267)
251 3fa4_A 2,3-dimethylmalate lyas 96.5 0.073 2.5E-06 49.3 14.9 180 90-294 27-245 (302)
252 1jub_A Dihydroorotate dehydrog 96.5 0.073 2.5E-06 49.2 15.2 157 71-232 93-271 (311)
253 2ze3_A DFA0005; organic waste 96.5 0.15 5E-06 46.7 16.8 169 90-294 25-238 (275)
254 2qdd_A Mandelate racemase/muco 96.4 0.1 3.4E-06 49.8 16.3 118 133-291 144-270 (378)
255 2hjp_A Phosphonopyruvate hydro 96.4 0.14 4.8E-06 47.1 16.5 182 90-294 24-241 (290)
256 2r8w_A AGR_C_1641P; APC7498, d 96.4 0.54 1.8E-05 44.0 20.9 182 73-291 40-245 (332)
257 2wkj_A N-acetylneuraminate lya 96.4 0.59 2E-05 43.1 21.2 180 73-293 17-220 (303)
258 2agk_A 1-(5-phosphoribosyl)-5- 96.4 0.0047 1.6E-07 56.2 6.4 68 215-293 41-108 (260)
259 3m5v_A DHDPS, dihydrodipicolin 96.4 0.58 2E-05 43.1 22.9 177 73-291 14-215 (301)
260 1tkk_A Similar to chloromucona 96.4 0.1 3.4E-06 49.4 15.9 121 133-291 139-271 (366)
261 2pp0_A L-talarate/galactarate 96.4 0.072 2.4E-06 51.2 14.9 119 134-290 175-303 (398)
262 1vc4_A Indole-3-glycerol phosp 96.4 0.021 7E-07 51.7 10.3 72 215-292 68-139 (254)
263 3ozy_A Putative mandelate race 96.3 0.022 7.4E-07 54.8 11.1 119 132-289 149-278 (389)
264 1rpx_A Protein (ribulose-phosp 96.3 0.047 1.6E-06 48.2 12.4 130 128-289 15-148 (230)
265 2oz8_A MLL7089 protein; struct 96.3 0.12 4.3E-06 49.3 16.2 117 134-288 145-273 (389)
266 3r2g_A Inosine 5'-monophosphat 96.3 0.014 4.8E-07 55.5 9.3 68 215-288 102-169 (361)
267 1o5k_A DHDPS, dihydrodipicolin 96.3 0.67 2.3E-05 42.8 21.5 178 73-291 19-223 (306)
268 1o66_A 3-methyl-2-oxobutanoate 96.3 0.36 1.2E-05 43.9 17.9 133 90-266 26-203 (275)
269 3b8i_A PA4872 oxaloacetate dec 96.3 0.12 4.3E-06 47.4 15.1 179 90-295 30-241 (287)
270 2qde_A Mandelate racemase/muco 96.2 0.088 3E-06 50.5 14.6 118 133-289 144-271 (397)
271 1twd_A Copper homeostasis prot 96.2 0.038 1.3E-06 49.8 11.1 125 130-288 67-198 (256)
272 1nsj_A PRAI, phosphoribosyl an 96.2 0.13 4.3E-06 45.0 14.3 155 92-291 13-183 (205)
273 3a5f_A Dihydrodipicolinate syn 96.2 0.18 6E-06 46.4 16.0 178 73-291 8-208 (291)
274 2rfg_A Dihydrodipicolinate syn 96.2 0.22 7.5E-06 45.9 16.6 178 73-291 7-207 (297)
275 1zfj_A Inosine monophosphate d 96.2 0.014 4.7E-07 57.8 8.9 233 41-288 12-302 (491)
276 3q94_A Fructose-bisphosphate a 96.2 0.66 2.3E-05 42.5 19.5 108 213-324 159-285 (288)
277 1pii_A N-(5'phosphoribosyl)ant 96.2 0.1 3.5E-06 51.1 14.8 88 193-289 97-185 (452)
278 3cpr_A Dihydrodipicolinate syn 96.2 0.71 2.4E-05 42.6 20.0 178 72-291 21-221 (304)
279 2v9d_A YAGE; dihydrodipicolini 96.2 0.35 1.2E-05 45.5 18.1 179 72-290 36-241 (343)
280 3eez_A Putative mandelate race 96.1 0.058 2E-06 51.6 12.8 117 133-291 144-270 (378)
281 1h1y_A D-ribulose-5-phosphate 96.1 0.044 1.5E-06 48.4 11.1 125 132-290 15-147 (228)
282 2ojp_A DHDPS, dihydrodipicolin 96.1 0.64 2.2E-05 42.6 19.4 180 73-291 7-208 (292)
283 1eix_A Orotidine 5'-monophosph 96.1 0.13 4.3E-06 46.1 14.2 59 221-293 158-226 (245)
284 1tzz_A Hypothetical protein L1 96.1 0.029 9.9E-07 53.8 10.5 118 134-289 165-296 (392)
285 3i4k_A Muconate lactonizing en 96.1 0.094 3.2E-06 50.1 14.0 119 133-289 147-276 (383)
286 2ps2_A Putative mandelate race 96.1 0.074 2.5E-06 50.5 13.2 117 133-291 145-272 (371)
287 1vs1_A 3-deoxy-7-phosphoheptul 96.0 0.28 9.5E-06 44.8 16.3 205 58-291 22-245 (276)
288 1gvf_A Tagatose-bisphosphate a 96.0 0.88 3E-05 41.7 20.3 107 213-324 155-281 (286)
289 2yxg_A DHDPS, dihydrodipicolin 96.0 0.53 1.8E-05 43.1 18.4 176 73-291 7-206 (289)
290 3stp_A Galactonate dehydratase 96.0 0.11 3.9E-06 50.1 14.5 128 133-292 178-315 (412)
291 3ajx_A 3-hexulose-6-phosphate 96.0 0.082 2.8E-06 45.6 12.2 118 134-289 11-135 (207)
292 2v82_A 2-dehydro-3-deoxy-6-pho 96.0 0.035 1.2E-06 48.3 9.7 112 131-287 14-127 (212)
293 3vav_A 3-methyl-2-oxobutanoate 96.0 0.46 1.6E-05 43.2 17.2 132 90-266 38-215 (275)
294 3pm6_A Putative fructose-bisph 95.9 0.75 2.6E-05 42.4 18.6 114 213-326 172-298 (306)
295 3l21_A DHDPS, dihydrodipicolin 95.9 1 3.5E-05 41.5 20.6 180 72-293 20-222 (304)
296 1xm3_A Thiazole biosynthesis p 95.9 0.022 7.5E-07 51.8 8.2 41 193-233 167-208 (264)
297 1m3u_A 3-methyl-2-oxobutanoate 95.9 0.7 2.4E-05 41.8 17.9 133 90-266 26-203 (264)
298 3d0c_A Dihydrodipicolinate syn 95.9 0.39 1.3E-05 44.6 16.8 177 73-290 17-216 (314)
299 2gdq_A YITF; mandelate racemas 95.9 0.05 1.7E-06 52.0 10.9 118 133-288 135-266 (382)
300 1v5x_A PRA isomerase, phosphor 95.8 0.13 4.3E-06 44.9 12.5 154 92-291 12-177 (203)
301 4dwd_A Mandelate racemase/muco 95.8 0.12 4.3E-06 49.5 13.7 125 133-289 138-272 (393)
302 3s5o_A 4-hydroxy-2-oxoglutarat 95.8 0.64 2.2E-05 42.9 18.0 182 72-291 19-224 (307)
303 3gr7_A NADPH dehydrogenase; fl 95.8 0.11 3.9E-06 48.8 13.0 89 122-231 209-306 (340)
304 3jva_A Dipeptide epimerase; en 95.7 0.21 7.3E-06 47.1 14.5 120 133-291 138-267 (354)
305 4avf_A Inosine-5'-monophosphat 95.7 0.037 1.3E-06 54.9 9.3 232 42-288 11-298 (490)
306 3f4w_A Putative hexulose 6 pho 95.6 0.2 7E-06 43.2 13.2 118 134-288 11-134 (211)
307 3ffs_A Inosine-5-monophosphate 95.6 0.026 9E-07 54.4 8.0 67 215-288 146-212 (400)
308 3rcy_A Mandelate racemase/muco 95.6 0.081 2.8E-06 51.5 11.5 133 133-291 145-287 (433)
309 3bjs_A Mandelate racemase/muco 95.6 0.044 1.5E-06 53.3 9.4 117 133-288 183-311 (428)
310 3sjn_A Mandelate racemase/muco 95.5 0.077 2.6E-06 50.6 10.8 119 135-289 147-276 (374)
311 3b4u_A Dihydrodipicolinate syn 95.5 1.4 4.9E-05 40.2 20.4 179 73-292 9-216 (294)
312 3tfx_A Orotidine 5'-phosphate 95.5 0.05 1.7E-06 49.3 8.9 80 216-315 148-237 (259)
313 3daq_A DHDPS, dihydrodipicolin 95.5 0.045 1.6E-06 50.4 8.8 92 218-312 29-125 (292)
314 4fxs_A Inosine-5'-monophosphat 95.5 0.047 1.6E-06 54.2 9.4 233 42-288 12-300 (496)
315 1z41_A YQJM, probable NADH-dep 95.5 0.13 4.6E-06 48.2 12.0 89 122-231 209-306 (338)
316 3cpr_A Dihydrodipicolinate syn 95.4 0.077 2.6E-06 49.2 10.2 92 218-312 43-139 (304)
317 2wqp_A Polysialic acid capsule 95.4 0.33 1.1E-05 45.8 14.5 137 133-287 32-180 (349)
318 1vqt_A Orotidine 5'-phosphate 95.4 0.044 1.5E-06 48.2 8.0 58 217-293 131-197 (213)
319 3tak_A DHDPS, dihydrodipicolin 95.4 0.054 1.8E-06 49.9 8.8 92 218-312 28-124 (291)
320 3fkr_A L-2-keto-3-deoxyarabona 95.4 1.7 5.8E-05 40.1 21.1 181 72-289 13-219 (309)
321 3ro6_B Putative chloromuconate 95.3 0.18 6.3E-06 47.6 12.6 120 133-291 139-269 (356)
322 3flu_A DHDPS, dihydrodipicolin 95.3 0.07 2.4E-06 49.3 9.3 92 218-312 34-130 (297)
323 3dg3_A Muconate cycloisomerase 95.3 0.18 6.3E-06 47.8 12.5 121 133-292 138-270 (367)
324 2wqp_A Polysialic acid capsule 95.3 0.44 1.5E-05 44.9 14.8 241 63-323 7-273 (349)
325 4aaj_A N-(5'-phosphoribosyl)an 95.3 0.3 1E-05 43.3 13.0 111 140-291 83-205 (228)
326 1vr6_A Phospho-2-dehydro-3-deo 95.3 0.65 2.2E-05 43.8 16.0 270 24-322 48-346 (350)
327 1xky_A Dihydrodipicolinate syn 95.3 0.069 2.4E-06 49.4 9.2 90 218-310 39-133 (301)
328 1f6k_A N-acetylneuraminate lya 95.2 0.07 2.4E-06 49.2 9.2 92 218-312 30-127 (293)
329 1sjd_A N-acylamino acid racema 95.2 0.18 6.1E-06 47.7 12.3 114 134-288 141-263 (368)
330 3tr2_A Orotidine 5'-phosphate 95.2 0.054 1.8E-06 48.5 8.1 80 216-315 148-237 (239)
331 2wkj_A N-acetylneuraminate lya 95.2 0.079 2.7E-06 49.1 9.5 93 218-313 38-135 (303)
332 1f6k_A N-acetylneuraminate lya 95.2 1.8 6.1E-05 39.6 23.3 179 73-292 9-211 (293)
333 1vli_A Spore coat polysacchari 95.2 1.4 4.9E-05 41.9 18.3 234 63-318 16-280 (385)
334 3ldv_A Orotidine 5'-phosphate 95.2 0.055 1.9E-06 48.9 8.1 79 216-314 166-254 (255)
335 1ujp_A Tryptophan synthase alp 95.2 0.029 9.8E-07 51.3 6.3 39 193-233 191-230 (271)
336 3zwt_A Dihydroorotate dehydrog 95.2 0.13 4.3E-06 49.1 11.1 99 123-232 221-327 (367)
337 3si9_A DHDPS, dihydrodipicolin 95.2 0.047 1.6E-06 50.9 7.9 92 218-312 49-145 (315)
338 3dz1_A Dihydrodipicolinate syn 95.2 1.9 6.5E-05 39.8 20.0 178 72-289 13-220 (313)
339 1f76_A Dihydroorotate dehydrog 95.2 0.12 4.2E-06 48.3 10.8 100 123-232 212-318 (336)
340 2hxt_A L-fuconate dehydratase; 95.2 0.11 3.9E-06 50.5 10.9 117 134-288 198-324 (441)
341 1vyr_A Pentaerythritol tetrani 95.2 0.15 5.2E-06 48.4 11.5 71 137-232 252-323 (364)
342 2yxg_A DHDPS, dihydrodipicolin 95.2 0.082 2.8E-06 48.6 9.3 91 218-311 27-122 (289)
343 3l21_A DHDPS, dihydrodipicolin 95.1 0.059 2E-06 50.0 8.4 90 218-310 42-136 (304)
344 2zad_A Muconate cycloisomerase 95.1 0.36 1.2E-05 45.2 14.0 116 133-287 138-264 (345)
345 3fok_A Uncharacterized protein 95.1 0.16 5.5E-06 46.8 11.0 161 92-293 75-278 (307)
346 3hgj_A Chromate reductase; TIM 95.1 0.21 7.3E-06 47.1 12.3 88 124-231 221-317 (349)
347 3qze_A DHDPS, dihydrodipicolin 95.1 0.062 2.1E-06 50.1 8.4 92 218-312 50-146 (314)
348 2htm_A Thiazole biosynthesis p 95.1 0.029 1E-06 50.7 5.9 40 193-232 165-207 (268)
349 3b0p_A TRNA-dihydrouridine syn 95.1 0.18 6.2E-06 47.6 11.8 78 137-232 145-225 (350)
350 2r8w_A AGR_C_1641P; APC7498, d 95.1 0.079 2.7E-06 49.8 9.2 92 218-312 61-157 (332)
351 3qfe_A Putative dihydrodipicol 95.1 1.2 4E-05 41.4 17.2 181 73-291 16-223 (318)
352 1vli_A Spore coat polysacchari 95.1 0.34 1.1E-05 46.3 13.5 138 133-287 41-190 (385)
353 3toy_A Mandelate racemase/muco 95.1 0.17 5.9E-06 48.3 11.7 119 133-289 166-295 (383)
354 3na8_A Putative dihydrodipicol 95.1 0.052 1.8E-06 50.6 7.7 91 218-311 51-146 (315)
355 4e5t_A Mandelate racemase / mu 95.0 0.12 4.2E-06 49.7 10.6 130 134-289 151-290 (404)
356 1oy0_A Ketopantoate hydroxymet 95.0 1.1 3.6E-05 41.0 16.1 133 90-266 43-221 (281)
357 3ugv_A Enolase; enzyme functio 95.0 0.22 7.4E-06 47.8 12.2 121 133-291 170-303 (390)
358 2poz_A Putative dehydratase; o 95.0 0.059 2E-06 51.6 8.1 135 133-288 136-280 (392)
359 2ehh_A DHDPS, dihydrodipicolin 95.0 0.078 2.7E-06 48.8 8.7 91 217-310 26-121 (294)
360 3b4u_A Dihydrodipicolinate syn 95.0 0.1 3.5E-06 48.1 9.4 94 218-313 30-128 (294)
361 2v9d_A YAGE; dihydrodipicolini 95.0 0.074 2.5E-06 50.2 8.6 90 218-310 58-152 (343)
362 1jcn_A Inosine monophosphate d 95.0 0.077 2.6E-06 52.8 9.2 68 215-288 257-324 (514)
363 3tj4_A Mandelate racemase; eno 95.0 0.15 5.1E-06 48.5 10.8 118 134-289 151-279 (372)
364 3fkr_A L-2-keto-3-deoxyarabona 95.0 0.075 2.6E-06 49.4 8.5 95 218-312 35-134 (309)
365 3hjz_A Transaldolase B; parach 94.9 0.28 9.6E-06 45.9 12.3 143 121-296 93-257 (334)
366 2rfg_A Dihydrodipicolinate syn 94.9 0.081 2.8E-06 48.9 8.6 93 217-312 26-123 (297)
367 2ojp_A DHDPS, dihydrodipicolin 94.9 0.078 2.7E-06 48.8 8.4 89 218-309 28-121 (292)
368 1vkf_A Glycerol uptake operon 94.9 0.14 4.9E-06 43.9 9.4 121 71-233 56-178 (188)
369 3ddm_A Putative mandelate race 94.9 0.12 4.1E-06 49.6 10.1 116 134-288 155-281 (392)
370 3q45_A Mandelate racemase/muco 94.9 0.21 7.1E-06 47.5 11.6 118 133-289 139-266 (368)
371 2o56_A Putative mandelate race 94.9 0.1 3.5E-06 50.1 9.7 130 134-288 152-296 (407)
372 2r91_A 2-keto-3-deoxy-(6-phosp 94.9 2.2 7.5E-05 38.8 22.5 173 73-290 5-198 (286)
373 2gl5_A Putative dehydratase pr 94.9 0.1 3.4E-06 50.3 9.5 136 134-288 150-299 (410)
374 3tha_A Tryptophan synthase alp 94.8 0.062 2.1E-06 48.5 7.3 40 193-233 188-228 (252)
375 2gou_A Oxidoreductase, FMN-bin 94.8 0.14 4.9E-06 48.6 10.2 70 136-231 250-321 (365)
376 3e96_A Dihydrodipicolinate syn 94.8 2.5 8.7E-05 39.0 20.0 181 72-291 16-217 (316)
377 3my9_A Muconate cycloisomerase 94.8 0.7 2.4E-05 43.8 15.0 121 133-291 145-275 (377)
378 2tps_A Protein (thiamin phosph 94.7 0.33 1.1E-05 42.3 11.8 110 138-289 33-144 (227)
379 1o5k_A DHDPS, dihydrodipicolin 94.7 0.076 2.6E-06 49.2 7.9 89 218-309 39-132 (306)
380 2e6f_A Dihydroorotate dehydrog 94.7 0.11 3.9E-06 47.9 9.2 109 123-232 161-273 (314)
381 3s5o_A 4-hydroxy-2-oxoglutarat 94.7 0.092 3.1E-06 48.7 8.4 94 218-312 41-139 (307)
382 3m5v_A DHDPS, dihydrodipicolin 94.7 0.089 3.1E-06 48.6 8.4 91 218-311 34-130 (301)
383 1vrd_A Inosine-5'-monophosphat 94.7 0.1 3.4E-06 51.6 9.2 232 41-288 17-306 (494)
384 3l5l_A Xenobiotic reductase A; 94.7 0.18 6.1E-06 47.9 10.5 77 135-231 245-324 (363)
385 3e96_A Dihydrodipicolinate syn 94.7 0.052 1.8E-06 50.6 6.6 92 218-313 39-135 (316)
386 3mwc_A Mandelate racemase/muco 94.6 1.3 4.5E-05 42.4 16.7 117 135-291 164-288 (400)
387 2vc6_A MOSA, dihydrodipicolina 94.6 0.074 2.5E-06 48.9 7.4 91 217-310 26-121 (292)
388 3qfe_A Putative dihydrodipicol 94.6 0.15 5.1E-06 47.5 9.6 93 218-311 38-135 (318)
389 3jr2_A Hexulose-6-phosphate sy 94.5 0.43 1.5E-05 41.6 11.9 116 134-288 17-139 (218)
390 2ox4_A Putative mandelate race 94.5 0.1 3.5E-06 50.1 8.5 136 134-290 146-292 (403)
391 1r0m_A N-acylamino acid racema 94.5 0.37 1.3E-05 45.7 12.3 114 134-288 148-269 (375)
392 1vhn_A Putative flavin oxidore 94.5 0.15 5.2E-06 47.4 9.3 86 122-232 126-213 (318)
393 3vk5_A MOEO5; TIM barrel, tran 94.5 0.17 5.7E-06 46.2 9.2 41 193-233 214-257 (286)
394 4ef8_A Dihydroorotate dehydrog 94.5 0.096 3.3E-06 49.7 8.0 101 121-232 192-306 (354)
395 2zc8_A N-acylamino acid racema 94.5 0.41 1.4E-05 45.3 12.5 115 134-289 141-263 (369)
396 3usb_A Inosine-5'-monophosphat 94.4 0.13 4.5E-06 51.1 9.3 234 41-288 35-325 (511)
397 4e4u_A Mandalate racemase/muco 94.4 0.21 7.2E-06 48.2 10.4 131 133-289 143-283 (412)
398 3d0c_A Dihydrodipicolinate syn 94.4 0.08 2.7E-06 49.3 7.2 91 218-312 39-134 (314)
399 2ekc_A AQ_1548, tryptophan syn 94.4 0.1 3.5E-06 47.3 7.7 40 193-233 195-235 (262)
400 3sbf_A Mandelate racemase / mu 94.3 0.2 6.8E-06 48.2 10.1 138 133-289 132-283 (401)
401 2gjl_A Hypothetical protein PA 94.3 0.2 7E-06 46.6 9.9 81 193-287 56-144 (328)
402 1mzh_A Deoxyribose-phosphate a 94.3 0.34 1.2E-05 42.7 10.8 81 124-232 117-204 (225)
403 1dbt_A Orotidine 5'-phosphate 94.3 0.074 2.5E-06 47.4 6.5 77 219-315 149-235 (239)
404 3h5d_A DHDPS, dihydrodipicolin 94.3 0.13 4.4E-06 47.8 8.3 90 218-310 34-129 (311)
405 3m16_A Transaldolase; dimer, m 94.3 2.8 9.6E-05 39.0 17.4 144 121-296 97-261 (329)
406 2qq6_A Mandelate racemase/muco 94.3 0.17 5.7E-06 48.8 9.4 130 134-289 149-292 (410)
407 3gd6_A Muconate cycloisomerase 94.2 0.82 2.8E-05 43.6 14.2 118 133-291 141-271 (391)
408 1chr_A Chloromuconate cycloiso 94.2 0.47 1.6E-05 44.9 12.4 112 140-289 149-270 (370)
409 2hmc_A AGR_L_411P, dihydrodipi 94.2 2.7 9.2E-05 39.4 17.4 181 73-290 32-234 (344)
410 3tkf_A Transaldolase; structur 94.2 3.1 0.00011 39.0 17.5 144 121-297 116-282 (345)
411 2yci_X 5-methyltetrahydrofolat 94.2 1.2 4.2E-05 40.3 14.5 72 133-230 31-105 (271)
412 3bo9_A Putative nitroalkan dio 94.1 0.59 2E-05 43.5 12.5 81 193-287 66-150 (326)
413 3tji_A Mandelate racemase/muco 94.1 0.26 8.9E-06 47.7 10.3 138 133-289 153-304 (422)
414 1eep_A Inosine 5'-monophosphat 94.0 0.16 5.4E-06 48.9 8.7 68 215-288 155-222 (404)
415 1tqj_A Ribulose-phosphate 3-ep 94.0 0.4 1.4E-05 42.3 10.8 40 193-232 157-201 (230)
416 3r4e_A Mandelate racemase/muco 94.0 0.19 6.6E-06 48.6 9.3 145 133-289 142-302 (418)
417 1w3i_A EDA, 2-keto-3-deoxy glu 94.0 3.5 0.00012 37.6 23.1 174 73-290 5-199 (293)
418 1ep3_A Dihydroorotate dehydrog 94.0 0.27 9.2E-06 45.1 9.9 40 193-232 230-270 (311)
419 3rr1_A GALD, putative D-galact 94.0 0.28 9.6E-06 47.2 10.4 127 133-289 124-260 (405)
420 3g8r_A Probable spore coat pol 94.0 2.7 9.1E-05 39.5 16.7 234 71-324 4-262 (350)
421 3dz1_A Dihydrodipicolinate syn 94.0 0.25 8.6E-06 45.9 9.7 91 218-313 35-130 (313)
422 2c6q_A GMP reductase 2; TIM ba 93.9 0.2 6.7E-06 47.4 8.9 67 216-288 121-189 (351)
423 3noy_A 4-hydroxy-3-methylbut-2 93.9 0.33 1.1E-05 45.7 10.1 79 124-232 31-112 (366)
424 1tv5_A Dhodehase, dihydroorota 93.8 0.32 1.1E-05 47.5 10.4 98 123-232 297-402 (443)
425 3eb2_A Putative dihydrodipicol 93.8 0.054 1.9E-06 50.1 4.7 91 218-311 31-126 (300)
426 3mqt_A Mandelate racemase/muco 93.8 0.36 1.2E-05 46.2 10.7 117 137-289 155-283 (394)
427 3g8r_A Probable spore coat pol 93.8 1.4 4.9E-05 41.4 14.4 83 193-287 80-166 (350)
428 1qop_A Tryptophan synthase alp 93.8 0.29 9.9E-06 44.3 9.5 41 193-233 194-235 (268)
429 3ngj_A Deoxyribose-phosphate a 93.8 0.74 2.5E-05 41.0 11.9 125 133-291 40-180 (239)
430 3iwp_A Copper homeostasis prot 93.8 0.21 7.1E-06 45.8 8.4 70 212-288 46-131 (287)
431 3vcn_A Mannonate dehydratase; 93.8 0.29 9.9E-06 47.4 10.0 141 133-289 149-309 (425)
432 3i6e_A Muconate cycloisomerase 93.7 1.8 6.2E-05 41.1 15.6 121 133-291 147-276 (385)
433 2hmc_A AGR_L_411P, dihydrodipi 93.7 0.19 6.5E-06 47.4 8.5 90 218-312 53-147 (344)
434 1yad_A Regulatory protein TENI 93.7 0.73 2.5E-05 40.0 11.8 111 95-233 82-193 (221)
435 2qiw_A PEP phosphonomutase; st 93.7 1.2 4E-05 40.1 13.3 188 75-313 22-253 (255)
436 2zbt_A Pyridoxal biosynthesis 93.7 0.23 7.9E-06 45.5 8.8 78 202-285 19-104 (297)
437 3i65_A Dihydroorotate dehydrog 93.7 0.24 8.1E-06 47.9 9.1 101 123-232 269-374 (415)
438 4dpp_A DHDPS 2, dihydrodipicol 93.6 0.14 4.9E-06 48.5 7.4 90 218-310 86-180 (360)
439 3a5f_A Dihydrodipicolinate syn 93.6 0.1 3.4E-06 48.1 6.2 76 218-293 28-108 (291)
440 3r0u_A Enzyme of enolase super 93.6 2.2 7.4E-05 40.5 15.7 120 133-291 141-272 (379)
441 3v3w_A Starvation sensing prot 93.6 0.3 1E-05 47.3 9.8 143 133-289 148-308 (424)
442 3oa3_A Aldolase; structural ge 93.5 0.59 2E-05 42.8 11.0 125 133-291 71-211 (288)
443 2z6i_A Trans-2-enoyl-ACP reduc 93.5 0.75 2.6E-05 42.9 12.1 111 91-232 78-191 (332)
444 3mkc_A Racemase; metabolic pro 93.4 0.59 2E-05 44.7 11.6 117 137-289 160-288 (394)
445 2isw_A Putative fructose-1,6-b 93.4 1.3 4.5E-05 41.2 13.3 108 213-324 153-304 (323)
446 4af0_A Inosine-5'-monophosphat 93.4 0.26 9E-06 48.9 9.0 236 40-289 59-351 (556)
447 1zco_A 2-dehydro-3-deoxyphosph 93.3 0.92 3.2E-05 40.9 11.9 117 132-279 33-151 (262)
448 1xi3_A Thiamine phosphate pyro 93.3 0.83 2.8E-05 39.2 11.3 41 193-233 151-191 (215)
449 3go2_A Putative L-alanine-DL-g 93.2 0.75 2.6E-05 44.2 12.0 139 134-290 143-294 (409)
450 2nv1_A Pyridoxal biosynthesis 93.2 0.69 2.4E-05 42.6 11.2 85 194-286 11-105 (305)
451 3bw2_A 2-nitropropane dioxygen 93.1 0.68 2.3E-05 43.8 11.4 60 215-287 112-171 (369)
452 2fli_A Ribulose-phosphate 3-ep 93.1 0.74 2.5E-05 39.8 10.8 40 193-232 154-198 (220)
453 3sgz_A Hydroxyacid oxidase 2; 93.0 0.59 2E-05 44.1 10.5 88 116-232 211-301 (352)
454 1nvm_A HOA, 4-hydroxy-2-oxoval 93.0 3.7 0.00013 38.3 16.2 151 134-314 28-191 (345)
455 3inp_A D-ribulose-phosphate 3- 93.0 0.27 9.3E-06 44.1 7.8 40 193-232 179-223 (246)
456 1twd_A Copper homeostasis prot 92.9 0.49 1.7E-05 42.5 9.3 71 212-289 8-94 (256)
457 3tr9_A Dihydropteroate synthas 92.9 0.51 1.7E-05 43.8 9.6 84 133-230 46-130 (314)
458 1m5w_A Pyridoxal phosphate bio 92.8 4.8 0.00016 35.6 19.5 122 139-293 28-160 (243)
459 3t6c_A RSPA, putative MAND fam 92.8 0.63 2.1E-05 45.3 10.7 147 133-289 154-322 (440)
460 3gk0_A PNP synthase, pyridoxin 92.8 5.3 0.00018 35.9 20.6 122 139-292 56-187 (278)
461 4ab4_A Xenobiotic reductase B; 92.8 0.51 1.8E-05 44.7 9.8 65 136-231 242-307 (362)
462 3o1n_A 3-dehydroquinate dehydr 92.7 3.2 0.00011 37.6 14.7 131 125-289 42-197 (276)
463 3aty_A Tcoye, prostaglandin F2 92.6 0.45 1.5E-05 45.4 9.2 69 136-231 266-335 (379)
464 1p0k_A Isopentenyl-diphosphate 92.4 1 3.5E-05 42.2 11.4 40 193-232 239-280 (349)
465 3ovp_A Ribulose-phosphate 3-ep 92.4 0.62 2.1E-05 41.1 9.4 40 193-232 157-197 (228)
466 2nli_A Lactate oxidase; flavoe 92.4 0.69 2.3E-05 43.9 10.2 89 115-232 222-313 (368)
467 1vs1_A 3-deoxy-7-phosphoheptul 92.2 3 0.0001 37.9 13.9 125 132-287 48-178 (276)
468 3gka_A N-ethylmaleimide reduct 92.2 0.65 2.2E-05 44.0 9.8 65 136-231 250-315 (361)
469 2vef_A Dihydropteroate synthas 92.2 0.49 1.7E-05 44.0 8.7 79 134-230 31-110 (314)
470 3o63_A Probable thiamine-phosp 92.1 1.2 4.2E-05 39.6 10.9 40 193-232 178-219 (243)
471 3vav_A 3-methyl-2-oxobutanoate 92.0 2 6.7E-05 39.0 12.2 94 193-288 18-126 (275)
472 2r14_A Morphinone reductase; H 91.9 0.39 1.3E-05 45.8 7.9 72 136-231 255-327 (377)
473 3oix_A Putative dihydroorotate 91.9 0.42 1.4E-05 45.0 8.0 40 193-232 262-304 (345)
474 2nuw_A 2-keto-3-deoxygluconate 91.8 7.2 0.00025 35.4 20.4 172 73-290 5-197 (288)
475 1xg4_A Probable methylisocitra 91.8 2.6 8.8E-05 38.7 13.0 91 194-287 7-113 (295)
476 3cq0_A Putative transaldolase 91.8 3.6 0.00012 38.5 14.2 97 194-296 153-265 (339)
477 2bdq_A Copper homeostasis prot 91.7 1.3 4.4E-05 39.0 10.3 116 142-287 14-152 (224)
478 1vr6_A Phospho-2-dehydro-3-deo 91.7 3.5 0.00012 38.8 14.0 126 132-288 116-247 (350)
479 3kru_A NADH:flavin oxidoreduct 91.7 1.6 5.4E-05 41.0 11.7 86 124-231 212-306 (343)
480 3ctl_A D-allulose-6-phosphate 91.6 1.7 6E-05 38.3 11.3 40 193-232 151-195 (231)
481 1aj0_A DHPS, dihydropteroate s 91.5 0.92 3.1E-05 41.5 9.6 75 134-230 36-115 (282)
482 1gox_A (S)-2-hydroxy-acid oxid 91.4 1.5 5.2E-05 41.5 11.5 42 245-289 213-254 (370)
483 2nzl_A Hydroxyacid oxidase 1; 91.4 0.89 3.1E-05 43.5 9.8 91 113-232 240-336 (392)
484 3vkj_A Isopentenyl-diphosphate 91.4 1.3 4.4E-05 42.1 10.8 87 199-287 113-217 (368)
485 3n9r_A Fructose-bisphosphate a 91.4 3.2 0.00011 38.2 13.1 110 213-324 155-304 (307)
486 1ub3_A Aldolase protein; schif 91.3 1.4 4.9E-05 38.6 10.3 73 216-289 75-154 (220)
487 1kbi_A Cytochrome B2, L-LCR; f 91.2 1.3 4.5E-05 43.9 11.2 87 117-232 338-432 (511)
488 3ble_A Citramalate synthase fr 91.2 1.9 6.5E-05 40.3 11.7 149 134-314 39-211 (337)
489 4dye_A Isomerase; enolase fami 91.2 4.4 0.00015 38.6 14.6 115 136-291 170-294 (398)
490 2h9a_B CO dehydrogenase/acetyl 91.1 1.2 4E-05 41.3 9.9 70 137-227 75-149 (310)
491 3dgb_A Muconate cycloisomerase 91.0 7.1 0.00024 36.9 15.7 120 134-291 148-278 (382)
492 1tx2_A DHPS, dihydropteroate s 91.0 0.54 1.8E-05 43.3 7.4 75 134-230 61-140 (297)
493 1vcf_A Isopentenyl-diphosphate 90.9 0.56 1.9E-05 43.7 7.8 40 193-232 244-285 (332)
494 1rvg_A Fructose-1,6-bisphospha 90.9 6.1 0.00021 36.4 14.5 110 213-324 153-302 (305)
495 3vzx_A Heptaprenylglyceryl pho 90.8 0.31 1.1E-05 43.2 5.5 40 193-233 168-209 (228)
496 2vp8_A Dihydropteroate synthas 90.8 0.61 2.1E-05 43.4 7.7 73 134-229 63-141 (318)
497 3nvt_A 3-deoxy-D-arabino-heptu 90.8 3.5 0.00012 39.3 13.2 123 133-287 153-282 (385)
498 3p3b_A Mandelate racemase/muco 90.7 0.41 1.4E-05 45.7 6.8 124 136-289 150-286 (392)
499 3k13_A 5-methyltetrahydrofolat 90.7 4.4 0.00015 37.2 13.4 75 133-229 34-110 (300)
500 1ea0_A Glutamate synthase [NAD 90.7 2.5 8.4E-05 46.9 13.4 120 216-335 591-725 (1479)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=4.4e-77 Score=569.15 Aligned_cols=333 Identities=46% Similarity=0.748 Sum_probs=317.7
Q ss_pred CCChHHHHHHHHHhCCccccccccCCCcchHHHHHHHhhcccccccccccCCCCCCCcceeEcCeecCcceeeccccccc
Q 018919 4 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQK 83 (349)
Q Consensus 4 ~~~~~d~~~~a~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~p~~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~~~ 83 (349)
++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|.|+||+|++++++||+|++||++++.||++||+++++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 84 MAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (349)
Q Consensus 84 l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~ 162 (349)
+.||++|.++|++|+++|+++++|+++++++|||.+..+ ++.|||||.++|++.+.+++++++++|+++|++|+|+|+.
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999887 7899999999999999999999999999999999999999
Q ss_pred CchhHHhhhhcCCCCcCcccccC-------------CCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCE
Q 018919 163 GRREADIKNRFTLPPFLTLKNFQ-------------GLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAG 228 (349)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~-------------~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~ 228 (349)
|+|++|+|++|..|++++.+++. ...|+.+ |++|+++|+.+++||++|++.+.++|+.+.++|+|+
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~GaD~ 241 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQG 241 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTTCSE
T ss_pred CcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCE
Confidence 99999999999888655444321 2457888 999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHH
Q 018919 229 IIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLE 308 (349)
Q Consensus 229 I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~ 308 (349)
|+++||||+++++++++++.|+++++.+++++|||++|||+++.|++|+|++||++|+|||+|+|++++.|++|+.++++
T Consensus 242 I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~gv~~~l~ 321 (352)
T 3sgz_A 242 IVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLD 321 (352)
T ss_dssp EEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcHHHHHHHH
Confidence 99999999999999999999999999987789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCChhhhcccceec
Q 018919 309 MLREEFELAMALSGCRSLKEITRDHIVT 336 (349)
Q Consensus 309 ~l~~el~~~m~~~G~~~i~~l~~~~l~~ 336 (349)
.+++||+.+|.++|+++++|++++.++.
T Consensus 322 ~l~~el~~~m~~~G~~~i~el~~~~~~y 349 (352)
T 3sgz_A 322 ILTAELHRCMTLSGCQSVAEISPDLIQF 349 (352)
T ss_dssp HHHHHHHHHHHHHTCSBGGGCCGGGBSS
T ss_pred HHHHHHHHHHHHhCCCcHHHHhhhcchh
Confidence 9999999999999999999999998864
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=3.2e-70 Score=532.62 Aligned_cols=336 Identities=56% Similarity=0.902 Sum_probs=312.4
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCCcchHHHHHHHhhcccccccccccCCCCCCCcceeEcCeecCcceeecccccc
Q 018919 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (349)
Q Consensus 3 ~~~~~~d~~~~a~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~p~~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~~ 82 (349)
.++|++|||+.||++||+.+|+|+.||+++|.|+++|+.+|++|.|+||+|++++++||+|+|+|++++.||++|||+++
T Consensus 26 ~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~~ 105 (392)
T 2nzl_A 26 RLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQ 105 (392)
T ss_dssp CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEecccccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCC
Q 018919 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (349)
Q Consensus 83 ~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~ 161 (349)
.+.||++|.+++++|+++|+++++|++++.++|++.+..+ ++.|||||.++|++.+.+.+++++++|++++.+|+|||+
T Consensus 106 ~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~ 185 (392)
T 2nzl_A 106 RMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPY 185 (392)
T ss_dssp GGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSS
T ss_pred ccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 9999999999999999999999999999899999987755 789999999999999999999999999999999999999
Q ss_pred CCchhHHhhhhcCCCCcCcccccC--------------C---------CCCCch-HHHHHHHHHhcCCcEEEEEecCHHH
Q 018919 162 LGRREADIKNRFTLPPFLTLKNFQ--------------G---------LDLGKM-DEDVKWLQTITKLPILVKGVLTAED 217 (349)
Q Consensus 162 ~g~r~~d~~~~~~~p~~~~~~~~~--------------~---------~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~ 217 (349)
.|+|++|+++++.+|.+++.++.. + ..++++ |++|+++++.+++||++|++.++++
T Consensus 186 ~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e~ 265 (392)
T 2nzl_A 186 LGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDD 265 (392)
T ss_dssp CCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECCHHH
T ss_pred ccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCCHHH
Confidence 999999999999888766433311 1 127777 9999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhh
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 297 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~ 297 (349)
|+.+.++|+|+|+|+||||++.++++++++.+.++++++++++|||++|||+++.|++|+|++|||+|++||||++++++
T Consensus 266 A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~ 345 (392)
T 2nzl_A 266 AREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAF 345 (392)
T ss_dssp HHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHh
Confidence 99999999999999999999999999999999999999876899999999999999999999999999999999999998
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccceeccc
Q 018919 298 EGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEW 338 (349)
Q Consensus 298 ~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 338 (349)
.|+++++++++.+.+||+.+|.++|+.+++|+++..+....
T Consensus 346 ~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~ 386 (392)
T 2nzl_A 346 QGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKNP 386 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBC---
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhCc
Confidence 89999999999999999999999999999999999886543
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=6.1e-70 Score=527.14 Aligned_cols=335 Identities=35% Similarity=0.577 Sum_probs=302.6
Q ss_pred CCCCChHHHHHHHHHhCCccccccccCCCcchHHHHHHHhhcccccccccccCCCCCCCcceeEcCeecCcceeeccccc
Q 018919 2 GEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAM 81 (349)
Q Consensus 2 ~~~~~~~d~~~~a~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~p~~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~ 81 (349)
..++|++|||+.||++||+.+|+|+.||++||.|+++|+.+|++|.|+||+|++++++||+|+|+|++++.||++|||++
T Consensus 11 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma~ 90 (368)
T 2nli_A 11 IDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIAA 90 (368)
T ss_dssp CCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCSC
T ss_pred ccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchhh
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCC
Q 018919 82 QKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (349)
Q Consensus 82 ~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p 160 (349)
+++.||++|.+++++|+++|+++++|++++.++|++.+..+ ++.|||||.++|++.+.+.+++++++|++++.||+|||
T Consensus 91 ~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p 170 (368)
T 2nli_A 91 HGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADST 170 (368)
T ss_dssp GGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC
T ss_pred ccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 88999999999999999999999999999889999977644 78999999999999999999999999999999999999
Q ss_pred CCCchhHHhhhhcCCCCcCcccc----------cCC------CCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHH
Q 018919 161 RLGRREADIKNRFTLPPFLTLKN----------FQG------LDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQ 223 (349)
Q Consensus 161 ~~g~r~~d~~~~~~~p~~~~~~~----------~~~------~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~ 223 (349)
..|+|++|+++++.+| ++.++ ..+ ..++.+ |++|+++|+.+++||++|++.++++|+.+.+
T Consensus 171 ~~g~r~~d~~~~~~~p--~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~ 248 (368)
T 2nli_A 171 VSGNRDRDVKNKFVYP--FGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDADMAIK 248 (368)
T ss_dssp ---CBC--------CC--SCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHHHHHHH
T ss_pred cccchhHHHhhcccCc--chhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHH
Confidence 9999999999998777 11010 111 236778 9999999999999999999999999999999
Q ss_pred cCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHH
Q 018919 224 AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGV 303 (349)
Q Consensus 224 ~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv 303 (349)
+|+|+|+|+||||+++++++++++.+.++++++++++|||++|||+++.|++|+|++|||+|+|||||++++++.|++|+
T Consensus 249 ~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G~~gv 328 (368)
T 2nli_A 249 RGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQGA 328 (368)
T ss_dssp TTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHH
Confidence 99999999999999999999999999999999876899999999999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChhhhcccceeccc
Q 018919 304 RRVLEMLREEFELAMALSGCRSLKEITRDHIVTEW 338 (349)
Q Consensus 304 ~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 338 (349)
.++++.+++||+.+|.++|+++++|+++..++...
T Consensus 329 ~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 363 (368)
T 2nli_A 329 YSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLFDNP 363 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSHHHHHTCCEEECT
T ss_pred HHHHHHHHHHHHHHHHHhCCcCHHHhccccEeecc
Confidence 99999999999999999999999999999887654
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=3.3e-68 Score=516.32 Aligned_cols=347 Identities=87% Similarity=1.286 Sum_probs=317.5
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCCcchHHHHHHHhhcccccccccccCCCCCCCcceeEcCeecCcceeecccccc
Q 018919 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (349)
Q Consensus 3 ~~~~~~d~~~~a~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~p~~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~~ 82 (349)
+++|++|||+.||++||+.+|+|++||+++|.|+++|+.+|++|.|+||+|++++++||+|+|+|++++.||++|||+++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (349)
Q Consensus 83 ~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~ 162 (349)
.+.||++|.+++++|+++|+++++|++++.++|++.+..+++.|||||.++|++.+.+.++++++.|+++++||+|+|..
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 89899999999999999999999999999999999887678899999998999999999999999999999999999999
Q ss_pred CchhHHhhhhcCCCCcCcccccCC--------------------CCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHH
Q 018919 163 GRREADIKNRFTLPPFLTLKNFQG--------------------LDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIA 221 (349)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~--------------------~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a 221 (349)
|+|++|+++++..|..++..++.. ..++.+ |+.++++++.+++||++|++.++++++.+
T Consensus 163 g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a 242 (370)
T 1gox_A 163 GRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLA 242 (370)
T ss_dssp CCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHH
T ss_pred cccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHH
Confidence 999999999998776653322211 346777 99999999999999999999999999999
Q ss_pred HHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHH
Q 018919 222 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 301 (349)
Q Consensus 222 ~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~ 301 (349)
.++|+|+|+|+||||+++++++++++.+.++++.+++++|||++|||++++|+.|++++|||+|+|||+|++++++.|++
T Consensus 243 ~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~~ 322 (370)
T 1gox_A 243 VQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEA 322 (370)
T ss_dssp HHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHH
T ss_pred HHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccHH
Confidence 99999999999999999999999999999999988768999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCChhhhcccceecccCCCCCCCCCCC
Q 018919 302 GVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 349 (349)
Q Consensus 302 gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~~~~~~~~~~~~ 349 (349)
|+.++++.+.+||+.+|.++|+.+++|++++.+..+.+.+.++.|-+|
T Consensus 323 gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~~~~~~~~~~ 370 (370)
T 1gox_A 323 GVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVARL 370 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC----------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHhhhcceeccccccccchhhcC
Confidence 999999999999999999999999999999999888887777777654
No 5
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=1.6e-66 Score=521.73 Aligned_cols=339 Identities=39% Similarity=0.660 Sum_probs=312.7
Q ss_pred CCCCChHHHHHHHHHhCCccccccccCCCcchHHHHHHHhhcccccccccccCCCCCCCcceeEcCeecCcceeeccccc
Q 018919 2 GEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAM 81 (349)
Q Consensus 2 ~~~~~~~d~~~~a~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~p~~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~ 81 (349)
.+++|++|||+.||++||+.+|+|+.||+++|.|+++|+.+|++|.|+||+|++++++||+|+|+|++++.||++|||++
T Consensus 120 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~ 199 (511)
T 1kbi_A 120 DNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATAL 199 (511)
T ss_dssp GGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSC
T ss_pred cccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEeccchh
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC-hhhHHHHHHHHH--cCCeEEecCCCCCCHHHHHhhC--C-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEE
Q 018919 82 QKMAHP-EGEYATARAASA--AGTIMTLSSWSTSSVEEVASTG--P-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIAL 155 (349)
Q Consensus 82 ~~l~~~-~~~~~la~aa~~--~G~~~~~~~~~~~~~e~i~~~~--~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i 155 (349)
+++.|| +++.+++++|++ +|+++++|++++.++|++.+.. + ++.|||||.+.|++.+.+++++++++|+++|+|
T Consensus 200 ~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~i 279 (511)
T 1kbi_A 200 CKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFV 279 (511)
T ss_dssp GGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEE
T ss_pred ccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 999999 999999999999 9999999999888999998765 2 789999998899999999999999999999999
Q ss_pred ecCCCCCCchhHHhhhhcCCCCc-Ccc------ccc-------CCCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHH
Q 018919 156 TVDTPRLGRREADIKNRFTLPPF-LTL------KNF-------QGLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARI 220 (349)
Q Consensus 156 ~~d~p~~g~r~~d~~~~~~~p~~-~~~------~~~-------~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~ 220 (349)
|+|+|+.|+|+++++++|..|.. +.. ... ....++.+ |+.|+++|+.+++||++|++.++++|+.
T Consensus 280 tvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e~A~~ 359 (511)
T 1kbi_A 280 TVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIK 359 (511)
T ss_dssp ECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEECSHHHHHH
T ss_pred eCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCCCHHHHHH
Confidence 99999999999999999876631 110 001 11257788 9999999999999999999999999999
Q ss_pred HHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHh-----cCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHH
Q 018919 221 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSL 295 (349)
Q Consensus 221 a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~-----~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~ 295 (349)
+.++|+|+|+|+||||++++.++++++.++++++++ .+++|||++|||+++.|++|+|++|||+|+|||+|++++
T Consensus 360 a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~~ 439 (511)
T 1kbi_A 360 AAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYAN 439 (511)
T ss_dssp HHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHH
Confidence 999999999999999999999999999999999988 347999999999999999999999999999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccceecccCC
Q 018919 296 AAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 340 (349)
Q Consensus 296 ~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~~~ 340 (349)
++.|++|+.++++.+++||+.+|.++|+.+++|++++.+..+...
T Consensus 440 ~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~ 484 (511)
T 1kbi_A 440 SCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTLK 484 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTTTT
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHHhhhhhhh
Confidence 888999999999999999999999999999999999988766554
No 6
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=7.5e-65 Score=493.95 Aligned_cols=335 Identities=41% Similarity=0.700 Sum_probs=309.0
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCCcchHHHHHHHhhcccccccccccCCCCCCCcceeEcCeecCcceeecccccc
Q 018919 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (349)
Q Consensus 3 ~~~~~~d~~~~a~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~p~~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~~ 82 (349)
+++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|.|+||+|++++++||+|+|+|++++.||++|||+++
T Consensus 4 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~~ 83 (380)
T 1p4c_A 4 NLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLN 83 (380)
T ss_dssp CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCcccc
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (349)
Q Consensus 83 ~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~ 162 (349)
++.||++|.+++++|+++|+++++|+.+++++|++.....++.|||+|.++ ++...+.+++++++|+++++||+|.|..
T Consensus 84 ~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~~ 162 (380)
T 1p4c_A 84 GALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVN 162 (380)
T ss_dssp GGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred ccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCccc
Confidence 899999999999999999999999999888999988764578999999987 8889999999999999999999999999
Q ss_pred CchhHHhhhhcCCCCcCcccc--------c------------CCCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHH
Q 018919 163 GRREADIKNRFTLPPFLTLKN--------F------------QGLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIA 221 (349)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~--------~------------~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a 221 (349)
|+|++|+++++..|..+...+ . ....+|.+ |+.|+++++.+++||++|++.++++|+.+
T Consensus 163 g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a 242 (380)
T 1p4c_A 163 GYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADRC 242 (380)
T ss_dssp CCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEECCHHHHHHH
T ss_pred cchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEecCcHHHHHHH
Confidence 999999999997664322211 0 11347888 99999999999999999999999999999
Q ss_pred HHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHH
Q 018919 222 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 301 (349)
Q Consensus 222 ~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~ 301 (349)
.++|+|+|+++||||++.++++++++.+.++++.+ ++|||++|||++++|+.|+|++||++|++||++++++.+.|++
T Consensus 243 ~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~--~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~~g~~ 320 (380)
T 1p4c_A 243 IAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT--GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGET 320 (380)
T ss_dssp HHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH--CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc--CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHhcCHH
Confidence 99999999999999999999999999999999988 5699999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCChhhhcccceecccCC
Q 018919 302 GVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 340 (349)
Q Consensus 302 gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~~~ 340 (349)
++.++++.+.+||+.+|.++|+.+++|++++.++..+..
T Consensus 321 ~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~g~~ 359 (380)
T 1p4c_A 321 GVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEGVT 359 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEEEC---
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHhccCeEEecccc
Confidence 999999999999999999999999999999998765544
No 7
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=100.00 E-value=1.8e-43 Score=339.96 Aligned_cols=272 Identities=18% Similarity=0.280 Sum_probs=213.9
Q ss_pred hhccccccccccc--CCCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHH--
Q 018919 41 NAFSRILFRPRIL--IDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE-- 116 (349)
Q Consensus 41 ~~~~~~~l~p~~l--~~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~-- 116 (349)
..||+|+|+|+.| .+.+++||+|+|+|++++.||++|||++++..+++.|.++|++|+++|+++++|+++.. +|+
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~-le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA-LKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc-ccCcc
Confidence 5899999999999 57789999999999999999999999999988889999999999999999999988642 222
Q ss_pred -----HHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCC
Q 018919 117 -----VASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (349)
Q Consensus 117 -----i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~ 190 (349)
+.+..| .+.+..|-..... .+..+.++..|++++.+|++.. ++ ...|.+ ++
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~~---e~~~~~ve~~~adal~ihln~~---------qe-~~~p~G----------d~ 189 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKPY---QAGLQAVRDLQPLFLQVHINLM---------QE-LLMPEG----------ER 189 (365)
T ss_dssp ------------CCEEEEEETTSCH---HHHHHHHHHHCCSCEEEEECHH---------HH-HTSSSS----------CC
T ss_pred ccceEehhhCCCCcEEEEeCCCCCH---HHHHHHHHhcCCCEEEEecccc---------cc-ccCCCC----------CC
Confidence 222234 3444444332222 2455666778999999999852 11 122331 34
Q ss_pred ch--H-HHHHHHHHhcCCcEEEEEe---cCHHHHHHHHHcCCCEEEEecCCCCCC---------------CCchhhHHHH
Q 018919 191 KM--D-EDVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGARQL---------------DYVPATIMAL 249 (349)
Q Consensus 191 ~~--~-~~i~~i~~~~~~pv~vK~v---~~~~~a~~a~~~G~d~I~v~~~gg~~~---------------~~~~~~~~~l 249 (349)
++ | +.|+++++.+++||++|++ .++++|+.+.++|+|+|+|+||||+++ ++|.++...|
T Consensus 190 ~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L 269 (365)
T 3sr7_A 190 EFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVL 269 (365)
T ss_dssp CCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHH
T ss_pred cHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHH
Confidence 44 5 6799999999999999998 799999999999999999999999864 5788888888
Q ss_pred HHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhh
Q 018919 250 EEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEI 329 (349)
Q Consensus 250 ~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l 329 (349)
.++. .+.+++|||++|||+++.|++|+|++|||+|++||+|++++.+.|++++.++++.+.+||+.+|.++|+++++||
T Consensus 270 ~~v~-~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~si~eL 348 (365)
T 3sr7_A 270 LNAQ-PLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIAEL 348 (365)
T ss_dssp HHHG-GGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCSSTGGG
T ss_pred HHHH-HhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHHHh
Confidence 8764 444579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceecc
Q 018919 330 TRDHIVTE 337 (349)
Q Consensus 330 ~~~~l~~~ 337 (349)
++..+...
T Consensus 349 ~~~~~~~~ 356 (365)
T 3sr7_A 349 RNVDYLLY 356 (365)
T ss_dssp GGCCEEEC
T ss_pred ccCCEEEc
Confidence 99887754
No 8
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=100.00 E-value=4.7e-42 Score=328.51 Aligned_cols=282 Identities=26% Similarity=0.279 Sum_probs=213.6
Q ss_pred cccccCCCcchHHHHHHHhhcccccccccccC--CCCCCCcceeEcCeecCcceeecccccccccCChh---hHHHHHHH
Q 018919 23 FDYYASGAEDQWTLQENRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAA 97 (349)
Q Consensus 23 ~~y~~~g~~~~~t~~~n~~~~~~~~l~p~~l~--~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~---~~~la~aa 97 (349)
.+|+....+++.|+++|+.+|++|.|+|++|+ +++++||+|+|+|++++.||++|||+++ ++.+ +.+++++|
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g~---~~~~~~~~~~la~~a 84 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTGG---EENGERINLALAEAA 84 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEeccccC---CcchhHHHHHHHHHH
Confidence 48899999999999999999999999999998 7789999999999999999999999874 4444 47999999
Q ss_pred HHcCCeEEecCCCCCCHHHH--------HhhCC-CceE-----EEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 018919 98 SAAGTIMTLSSWSTSSVEEV--------ASTGP-GIRF-----FQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG 163 (349)
Q Consensus 98 ~~~G~~~~~~~~~~~~~e~i--------~~~~~-~~~~-----~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g 163 (349)
+++|+++++|++++. +++. ....+ .+.+ .|++. .+++...+. ++..+++++.++++..
T Consensus 85 ~~~G~~~~~~~~~~~-le~~~~~~~~ql~~~~~d~pv~~~~~~~q~~~-~~~~~~~~a---~~~~~~~a~~i~~n~~--- 156 (332)
T 1vcf_A 85 EALGVGMMLGSGRIL-LERPEALRSFRVRKVAPKALLIANLGLAQLRR-YGRDDLLRL---VEMLEADALAFHVNPL--- 156 (332)
T ss_dssp HHHTCEEEEEECHHH-HHCTTTHHHHCCTTTCSSSCEEEEEEGGGGGT-CCHHHHHHH---HHHHTCSEEEEECCHH---
T ss_pred HHcCCCEEeCCchhc-ccCCCccceEEeeccCCCceeecccChhhhhc-cChHHHHHH---HhhcCCCceeeccchH---
Confidence 999999999988653 4431 11111 2222 23322 233333333 3445889999988642
Q ss_pred chhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe---cCHHHHHHHHHcCCCEEEEecCCC---
Q 018919 164 RREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGA--- 236 (349)
Q Consensus 164 ~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---~~~~~a~~a~~~G~d~I~v~~~gg--- 236 (349)
+..+. .. ..+.. .|+.++++|+ +++||++|++ .++++|+.+.++|+|+|+++||||
T Consensus 157 ------~~~~~-~~---------~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~ 219 (332)
T 1vcf_A 157 ------QEAVQ-RG---------DTDFRGLVERLAELLP-LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSW 219 (332)
T ss_dssp ------HHHHT-TS---------CCCCTTHHHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCH
T ss_pred ------HHHhc-CC---------CccHHHHHHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcc
Confidence 11111 00 01111 3789999999 9999999988 899999999999999999999987
Q ss_pred ------CC---------CCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHH
Q 018919 237 ------RQ---------LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 301 (349)
Q Consensus 237 ------~~---------~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~ 301 (349)
++ .++++++++.+.++++.++ ++|||++|||+++.|++|+|++|||+|++||+|++++ +.|++
T Consensus 220 ~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~-~~G~~ 297 (332)
T 1vcf_A 220 ARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA-LEGAE 297 (332)
T ss_dssp HHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH-TTCHH
T ss_pred hhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH-hccHH
Confidence 54 6788899999999998874 6999999999999999999999999999999999988 78999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCChhhhcccce
Q 018919 302 GVRRVLEMLREEFELAMALSGCRSLKEITRDHI 334 (349)
Q Consensus 302 gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l 334 (349)
++.++++.+.+||+.+|.++|+++++|++++.-
T Consensus 298 gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~~ 330 (332)
T 1vcf_A 298 RVAAWIGDYLEELRTALFAIGARNPKEARGRVE 330 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSGGGGTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHhhhhc
Confidence 999999999999999999999999999987643
No 9
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=100.00 E-value=3.5e-40 Score=317.64 Aligned_cols=273 Identities=23% Similarity=0.322 Sum_probs=222.2
Q ss_pred HhhcccccccccccC--CCCCCCcceeEcCeecCcceeeccccccc-ccCChhhHHHHHHHHHcCCeEEecCCCCCCHHH
Q 018919 40 RNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQK-MAHPEGEYATARAASAAGTIMTLSSWSTSSVEE 116 (349)
Q Consensus 40 ~~~~~~~~l~p~~l~--~~~~~d~s~~l~g~~~~~Pi~iApm~~~~-l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~ 116 (349)
..+|++|.|+|++|+ +++++|++|+|+|.++++||++|||++.. ..+++++.+++++|.++|++++++++++. +++
T Consensus 22 ~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~~ 100 (349)
T 1p0k_A 22 ETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LKD 100 (349)
T ss_dssp CCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TTC
T ss_pred cCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-ccC
Confidence 568999999999998 77899999999999999999999996644 34456688999999999999999988653 322
Q ss_pred ---------HHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCC
Q 018919 117 ---------VASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG 186 (349)
Q Consensus 117 ---------i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~ 186 (349)
+....+ .+.+.|+....+.+.. .+.+++.|+++|++|++||... ..|.
T Consensus 101 ~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~~---~~~~~~~gad~i~i~~~~~~~~----------~~~~--------- 158 (349)
T 1p0k_A 101 PSERLSYEIVRKENPNGLIFANLGSEATAAQA---KEAVEMIGANALQIHLNVIQEI----------VMPE--------- 158 (349)
T ss_dssp HHHHHHHHHHHHHCSSSCEEEEEETTCCHHHH---HHHHHHTTCSEEEEEECTTTTC-----------------------
T ss_pred cccccceehhhhhCCCceeEEeecCCCCHHHH---HHHHHhcCCCeEEecccchhhh----------cCCC---------
Confidence 232333 5678888743455433 3445678999999999997421 1111
Q ss_pred CCCCc---hHHHHHHHHHhcCCcEEEEEe---cCHHHHHHHHHcCCCEEEEecCCC---------CC-------CCCchh
Q 018919 187 LDLGK---MDEDVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGA---------RQ-------LDYVPA 244 (349)
Q Consensus 187 ~~~~~---~~~~i~~i~~~~~~pv~vK~v---~~~~~a~~a~~~G~d~I~v~~~gg---------~~-------~~~~~~ 244 (349)
.++. .++.++++|+.+++||++|++ .++++++.+.++|+|+|+++|||| ++ .+++++
T Consensus 159 -~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~ 237 (349)
T 1p0k_A 159 -GDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGIS 237 (349)
T ss_dssp -----CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCC
T ss_pred -CCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCcc
Confidence 1232 267899999999999999997 789999999999999999999988 43 467888
Q ss_pred hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 018919 245 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCR 324 (349)
Q Consensus 245 ~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 324 (349)
+++.|.++++.+ .++|||++|||++++|+.|++++|||+|+|||+|++.+.+.|++++.++++.+.+||+.+|.++|+.
T Consensus 238 ~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~ 316 (349)
T 1p0k_A 238 TAASLAEIRSEF-PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGAR 316 (349)
T ss_dssp HHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999998876 4799999999999999999999999999999999998877788999999999999999999999999
Q ss_pred Chhhhcccceecc
Q 018919 325 SLKEITRDHIVTE 337 (349)
Q Consensus 325 ~i~~l~~~~l~~~ 337 (349)
+++|++++.+...
T Consensus 317 ~i~el~~~~~~~~ 329 (349)
T 1p0k_A 317 TIADLQKAPLVIK 329 (349)
T ss_dssp BHHHHTTCCEEEC
T ss_pred CHHHHhhCCeecc
Confidence 9999999987753
No 10
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=100.00 E-value=1.1e-39 Score=314.57 Aligned_cols=274 Identities=22% Similarity=0.248 Sum_probs=219.7
Q ss_pred hhcccccccccccC--CCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCC------
Q 018919 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS------ 112 (349)
Q Consensus 41 ~~~~~~~l~p~~l~--~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~------ 112 (349)
..||+|+|+|+.|+ +.+++||+|+|+|++++.||++|||+|++....+.+..++++|+++|+++++|+++..
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 47999999999998 7889999999999999999999999987754456677899999999999999998421
Q ss_pred --CHHHHHhhCC-CceEEEEeec-----CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccccc
Q 018919 113 --SVEEVASTGP-GIRFFQLYVY-----KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNF 184 (349)
Q Consensus 113 --~~e~i~~~~~-~~~~~Ql~~~-----~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~ 184 (349)
+.+-+++..| .+.+-++... .+.+... +.++..+++++.||++. .+..++ |.+
T Consensus 107 ~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~---~av~~~~a~al~Ihln~---------~~~~~~-p~g------ 167 (368)
T 3vkj_A 107 RESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQ---DAIQMIEADAIAVHLNP---------AQEVFQ-PEG------ 167 (368)
T ss_dssp SHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHH---HHHHHTTCSEEEEECCH---------HHHHHS-SSC------
T ss_pred HhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHH---HHHHHhcCCCeEEEecc---------hhhhhC-CCC------
Confidence 1112444566 4444444431 2333322 22344588999999863 122221 321
Q ss_pred CCCCCCc--hHHHHHHHHHhcCCcEEEEEe---cCHHHHHHHHHcCCCEEEEecCCC---------CC------------
Q 018919 185 QGLDLGK--MDEDVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGA---------RQ------------ 238 (349)
Q Consensus 185 ~~~~~~~--~~~~i~~i~~~~~~pv~vK~v---~~~~~a~~a~~~G~d~I~v~~~gg---------~~------------ 238 (349)
..+-. .++.|+++++.+++||++|++ .++++|+.+.++|+|+|+|+|||| |+
T Consensus 168 --~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~ 245 (368)
T 3vkj_A 168 --EPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAK 245 (368)
T ss_dssp --CCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHH
T ss_pred --CchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhcc
Confidence 01122 378899999999999999987 799999999999999999999999 43
Q ss_pred --CCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 018919 239 --LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFEL 316 (349)
Q Consensus 239 --~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~ 316 (349)
.++|.|+...|.+++++++ ++|||++|||+++.|++|+|++|||+|++||||++++. .|++++.++++.+.+||+.
T Consensus 246 ~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~-~G~~~v~~~l~~l~~eL~~ 323 (368)
T 3vkj_A 246 NFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAI-EGKESLEQFFRKIIFELKA 323 (368)
T ss_dssp HTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH-HCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHHHcC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHh-cChHHHHHHHHHHHHHHHH
Confidence 2347788889999998874 69999999999999999999999999999999999876 6899999999999999999
Q ss_pred HHHHcCCCChhhhcccceecc
Q 018919 317 AMALSGCRSLKEITRDHIVTE 337 (349)
Q Consensus 317 ~m~~~G~~~i~~l~~~~l~~~ 337 (349)
+|.++|+++++|+++..+...
T Consensus 324 ~m~~~G~~~i~el~~~~l~~~ 344 (368)
T 3vkj_A 324 AMMLTGSKDVDALKKTSIVIL 344 (368)
T ss_dssp HHHHTTCCBHHHHHTCCEEEC
T ss_pred HHHHhCCCCHHHhccCCEEec
Confidence 999999999999998887754
No 11
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=7.2e-42 Score=334.37 Aligned_cols=308 Identities=18% Similarity=0.241 Sum_probs=232.5
Q ss_pred HHhCCccccccccCCCcchHHHHHHHhhccccccccc-ccCCCCCCCcceeEcCeecCcceeecccccccccCChhhHHH
Q 018919 15 KEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPR-ILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYAT 93 (349)
Q Consensus 15 ~~~l~~~~~~y~~~g~~~~~t~~~n~~~~~~~~l~p~-~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~l 93 (349)
..+||++.|+|+.+|++++ ++|..+||+|.|+|+ .+.+++++|++|+|+|++++.||++|||++. .++ ++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~g~--~~~----~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSDAL--ASP----EF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCTTT--CCH----HH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCCCc--ccH----HH
Confidence 4678999999999999999 468999999999998 7889999999999999999999999999853 344 79
Q ss_pred HHHHHHcCCeEEecCC--------CCCCHHHHHhhCC-------CceEEEEeecC-ChhHHHHHHHHHHHcCCCEEEEec
Q 018919 94 ARAASAAGTIMTLSSW--------STSSVEEVASTGP-------GIRFFQLYVYK-DRNVVAQLVRRAERAGFKAIALTV 157 (349)
Q Consensus 94 a~aa~~~G~~~~~~~~--------~~~~~e~i~~~~~-------~~~~~Ql~~~~-~~~~~~~~~~~~~~~G~~~i~i~~ 157 (349)
+++++++|+++++++. ...+++++++..+ .+.|+|+|... +++...+.+++++++|+.++. .+
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~-~v 162 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAV-RV 162 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEE-EE
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEE-Ee
Confidence 9999999999999862 2234566654422 34688988644 888888999999998887754 23
Q ss_pred CCCCCCchhHHhhhhcC-C-CCcCcc--cc-cCCCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEE
Q 018919 158 DTPRLGRREADIKNRFT-L-PPFLTL--KN-FQGLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIV 231 (349)
Q Consensus 158 d~p~~g~r~~d~~~~~~-~-p~~~~~--~~-~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v 231 (349)
.. .+..+....+. . .+.+.. .. ......+.. |+.++++++.+++||++|++.++++|+.+.++|+|+|++
T Consensus 163 ~~----~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad~i~v 238 (393)
T 2qr6_A 163 SP----QNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAGGVNDYTTALHMMRTGAVGIIV 238 (393)
T ss_dssp CT----TTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEECCCSHHHHHHHHTTTCSEEEE
T ss_pred CC----ccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 21 23322222220 0 000000 00 011234544 888999999999999999999999999999999999999
Q ss_pred ec--CCCCCCC-CchhhHHHHHHHHHH-------hcCC-CcEEEecCCCCHHHHHHHHHhCCCEEEEchHH---------
Q 018919 232 SN--HGARQLD-YVPATIMALEEVVKA-------TQGR-IPVFLDGGVRRGTDVFKALALGASGIFIGRPV--------- 291 (349)
Q Consensus 232 ~~--~gg~~~~-~~~~~~~~l~~i~~~-------~~~~-ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~--------- 291 (349)
++ |++++++ .++++++.+.+++++ ++++ +|||++|||+++.|++|+|++||++|++||+|
T Consensus 239 g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~es~~~ 318 (393)
T 2qr6_A 239 GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGK 318 (393)
T ss_dssp SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTTCTTT
T ss_pred CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCCCCCc
Confidence 77 5555544 468899999998887 5333 99999999999999999999999999999996
Q ss_pred --HHHHhhcCH---HHH--------------HHHH----------HHHHHHHHHHHHHcCCCChhhhcccceec
Q 018919 292 --VYSLAAEGE---KGV--------------RRVL----------EMLREEFELAMALSGCRSLKEITRDHIVT 336 (349)
Q Consensus 292 --l~~~~~~G~---~gv--------------~~~l----------~~l~~el~~~m~~~G~~~i~~l~~~~l~~ 336 (349)
+|++++.|. +|+ .+++ +.+.+||+..|.++|+++++||++..+..
T Consensus 319 ~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~ 392 (393)
T 2qr6_A 319 GYFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYTDLKSFQKVSLHV 392 (393)
T ss_dssp TEECCGGGGCSSSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHHHHTTCCEEE
T ss_pred eEEEecccCcccCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHHHHHHhCCCCHHHHhhccEec
Confidence 455544332 232 3333 36689999999999999999999887753
No 12
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=100.00 E-value=3.3e-37 Score=295.28 Aligned_cols=264 Identities=18% Similarity=0.224 Sum_probs=197.2
Q ss_pred HHHHHHhhcccccccccc--cCCCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCC
Q 018919 35 TLQENRNAFSRILFRPRI--LIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS 112 (349)
Q Consensus 35 t~~~n~~~~~~~~l~p~~--l~~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~ 112 (349)
-.-.|..+||+|.|+|++ +.+++++|++|+|+|++++.||++|||++.+ +..+++++.+.|...++......
T Consensus 8 ~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s------~~~la~a~~~~gg~g~~~~~~~~ 81 (336)
T 1ypf_A 8 HHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTII------DERIATYLAENNYFYIMHRFQPE 81 (336)
T ss_dssp ----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTC------CHHHHHHHHHTTCCCCCCCSSGG
T ss_pred ccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCCC------hHHHHHHHHhCCCEEEecCCCCH
Confidence 345689999999999999 5788999999999999999999999999764 35777765666554443322211
Q ss_pred CHHH-HHhhC-CC-ceEEEEeecCChhHHHHHHHHHHHcC--CCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCC
Q 018919 113 SVEE-VASTG-PG-IRFFQLYVYKDRNVVAQLVRRAERAG--FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL 187 (349)
Q Consensus 113 ~~e~-i~~~~-~~-~~~~Ql~~~~~~~~~~~~~~~~~~~G--~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~ 187 (349)
..++ +.+.. .+ +..+|+ . .+++ ..+.++.+.+.| ++++.+|+..
T Consensus 82 ~~~~~i~~~~~~g~~v~v~~-g-~~~~-~~~~a~~~~~~g~~~~~i~i~~~~---------------------------- 130 (336)
T 1ypf_A 82 KRISFIRDMQSRGLIASISV-G-VKED-EYEFVQQLAAEHLTPEYITIDIAH---------------------------- 130 (336)
T ss_dssp GHHHHHHHHHHTTCCCEEEE-C-CSHH-HHHHHHHHHHTTCCCSEEEEECSS----------------------------
T ss_pred HHHHHHHHHHhcCCeEEEeC-C-CCHH-HHHHHHHHHhcCCCCCEEEEECCC----------------------------
Confidence 2222 22221 12 456663 2 2333 345677888888 8888876521
Q ss_pred CCCch-HHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEecCCCCCCC------Cchh--hHHHHHHHHHHhc
Q 018919 188 DLGKM-DEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSNHGARQLD------YVPA--TIMALEEVVKATQ 257 (349)
Q Consensus 188 ~~~~~-~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~~~gg~~~~------~~~~--~~~~l~~i~~~~~ 257 (349)
.++.. |+.|+++++.++.|+++|+ +.++++|+.+.++|||+|+++||||++.+ ++.+ +++.+.++++++
T Consensus 131 G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~- 209 (336)
T 1ypf_A 131 GHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA- 209 (336)
T ss_dssp CCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC-
T ss_pred CCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc-
Confidence 02344 8899999999976766777 89999999999999999999999998754 2334 789999999887
Q ss_pred CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH--------------------HHHhhcCHHHHH-------------
Q 018919 258 GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEGEKGVR------------- 304 (349)
Q Consensus 258 ~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l--------------------~~~~~~G~~gv~------------- 304 (349)
++|||++|||+++.|++|+|++|||+|++||+|+ |++++.|++++.
T Consensus 210 -~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~g~~~~~~g~~~~~~~~ 288 (336)
T 1ypf_A 210 -SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQKGEKKNVEGKKMFVEHK 288 (336)
T ss_dssp -SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC-----------------------CTTSCCSSSSCC
T ss_pred -CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhccCccccccceeeeccc
Confidence 8999999999999999999999999999999999 888887777665
Q ss_pred ----HHHHHHHHHHHHHHHHcCCCChhhhcccceecc
Q 018919 305 ----RVLEMLREEFELAMALSGCRSLKEITRDHIVTE 337 (349)
Q Consensus 305 ----~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~ 337 (349)
++++.+++||+..|.++|+++++||++..+...
T Consensus 289 g~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~~ 325 (336)
T 1ypf_A 289 GSLEDTLIEMEQDLQSSISYAGGTKLDSIRTVDYVVV 325 (336)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTSSBGGGGGGCCEEEC
T ss_pred ccHHHHHHHHHHHHHHHHHHhCcccHHHhCcCCEEEE
Confidence 899999999999999999999999998876654
No 13
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=100.00 E-value=1.5e-36 Score=291.67 Aligned_cols=261 Identities=20% Similarity=0.217 Sum_probs=205.2
Q ss_pred HHHHHhhcccccccccccC-CC-CCCCcceeEc-----CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecC
Q 018919 36 LQENRNAFSRILFRPRILI-DV-SKIDMNTTVL-----GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSS 108 (349)
Q Consensus 36 ~~~n~~~~~~~~l~p~~l~-~~-~~~d~s~~l~-----g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~ 108 (349)
+++|..+||+|.|+|+.+. +. +++||+|+|+ +++++.||++|||++.+ +.++|++++++|..++++.
T Consensus 15 ~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~~------~~~lA~Ava~~Gglg~i~~ 88 (351)
T 2c6q_A 15 VPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVG------TFEMAKVLCKFSLFTAVHK 88 (351)
T ss_dssp ----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTTS------CHHHHHHHHHTTCEEECCT
T ss_pred cccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCCC------cHHHHHHHHHCCCEEEEcC
Confidence 5778999999999999986 67 7999999999 99999999999998643 6789999999999988864
Q ss_pred CCCCCHHHHHhh---CCC---ceEEEEeecCChhHHHHHHHHHHHc--CCCEEEEecCCCCCCchhHHhhhhcCCCCcCc
Q 018919 109 WSTSSVEEVAST---GPG---IRFFQLYVYKDRNVVAQLVRRAERA--GFKAIALTVDTPRLGRREADIKNRFTLPPFLT 180 (349)
Q Consensus 109 ~~~~~~e~i~~~---~~~---~~~~Ql~~~~~~~~~~~~~~~~~~~--G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~ 180 (349)
+.+++++.+. .|. .....+ ..+.+. .+.++.+.+. |++++.+++..
T Consensus 89 --~~s~e~~~~~i~~~p~~l~~v~~~~--g~~~~~-~~~~~~l~~~~~g~~~i~i~~~~--------------------- 142 (351)
T 2c6q_A 89 --HYSLVQWQEFAGQNPDCLEHLAASS--GTGSSD-FEQLEQILEAIPQVKYICLDVAN--------------------- 142 (351)
T ss_dssp --TCCHHHHHHHHHHCGGGCTTEEEEE--CSSHHH-HHHHHHHHHHCTTCCEEEEECSC---------------------
T ss_pred --CCCHHHHHHHHhhCchhhheeEeec--CCChHH-HHHHHHHHhccCCCCEEEEEecC---------------------
Confidence 4567765443 231 122222 122332 3445555555 89998876532
Q ss_pred ccccCCCCCCch-HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCC-----CCC-CchhhHHHHHHH
Q 018919 181 LKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR-----QLD-YVPATIMALEEV 252 (349)
Q Consensus 181 ~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~-----~~~-~~~~~~~~l~~i 252 (349)
.++.. |+.++++|+.+ ++||++|.+.++++|+.+.++|+|+|++++++|. +++ ++.+++..+.++
T Consensus 143 -------g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v 215 (351)
T 2c6q_A 143 -------GYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMEC 215 (351)
T ss_dssp -------TTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHH
T ss_pred -------CCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHH
Confidence 02233 88999999999 8999999999999999999999999999987763 222 356788888888
Q ss_pred HHHhcC-CCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH--------------------HHHhhcC------------
Q 018919 253 VKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEG------------ 299 (349)
Q Consensus 253 ~~~~~~-~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l--------------------~~~~~~G------------ 299 (349)
.+.++. ++|||++|||+++.|++|||++||++|++||+|+ |++++.|
T Consensus 216 ~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~~~g~~~~~ 295 (351)
T 2c6q_A 216 ADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEY 295 (351)
T ss_dssp HHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHHHSSSCCTT
T ss_pred HHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhccccccccc
Confidence 776532 7999999999999999999999999999999997 6665433
Q ss_pred --HHH----------HHHHHHHHHHHHHHHHHHcCCCChhhhccccee
Q 018919 300 --EKG----------VRRVLEMLREEFELAMALSGCRSLKEITRDHIV 335 (349)
Q Consensus 300 --~~g----------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~ 335 (349)
++| +.++++.|..||+..|.++|+++++||++....
T Consensus 296 ~~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~~~~ 343 (351)
T 2c6q_A 296 RASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTF 343 (351)
T ss_dssp CCCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHHCCE
T ss_pred ccccceEEEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhCCcE
Confidence 366 999999999999999999999999999876543
No 14
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=100.00 E-value=3.4e-35 Score=281.39 Aligned_cols=253 Identities=19% Similarity=0.240 Sum_probs=207.0
Q ss_pred hhcccccccccccCCCC--CCCc--ceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHH
Q 018919 41 NAFSRILFRPRILIDVS--KIDM--NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE 116 (349)
Q Consensus 41 ~~~~~~~l~p~~l~~~~--~~d~--s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~ 116 (349)
.+||+|.|+|+.+.+.. ++|+ +|+|+|++++.||++|||. +.+|.+||++++++|++++++++ .++|+
T Consensus 8 ~~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM~------~vte~~lA~A~a~~Gg~gvi~~~--~s~ee 79 (361)
T 3r2g_A 8 ITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANMD------TITESNMANFMHSKGAMGALHRF--MTIEE 79 (361)
T ss_dssp CCGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCST------TTCSHHHHHHHHHTTCEEBCCSC--SCHHH
T ss_pred cccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCCC------CchHHHHHHHHHHcCCCEEEeCC--CCHHH
Confidence 47999999999998765 7654 5599999999999999994 34588999999999999999864 68898
Q ss_pred HHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHH
Q 018919 117 VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DED 195 (349)
Q Consensus 117 i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~ 195 (349)
+.+..+...|+|.|...+++...+.++++.++|++.|+++.... .+.. |+.
T Consensus 80 ~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G----------------------------~~~~~~e~ 131 (361)
T 3r2g_A 80 NIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAHA----------------------------HAKYVGKT 131 (361)
T ss_dssp HHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCC----------------------------SSHHHHHH
T ss_pred HHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCC----------------------------CcHhHHHH
Confidence 87654444567777766777788899999999999877654321 1223 789
Q ss_pred HHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCC------CchhhHHHHHHHHHHhcCCCcEEEecCC
Q 018919 196 VKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLD------YVPATIMALEEVVKATQGRIPVFLDGGV 268 (349)
Q Consensus 196 i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~------~~~~~~~~l~~i~~~~~~~ipvia~GGI 268 (349)
|+++|+.+ ++||++|.+.++++|+.+.++|||+|+|++++|++.+ .+.+++..+.++++.+ . |||++|||
T Consensus 132 I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~--~-PVIAdGGI 208 (361)
T 3r2g_A 132 LKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRAD--R-SIVADGGI 208 (361)
T ss_dssp HHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSS--S-EEEEESCC
T ss_pred HHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhC--C-CEEEECCC
Confidence 99999988 7999999999999999999999999999988886532 2456778887776654 2 99999999
Q ss_pred CCHHHHHHHHHhCCCEEEEchHHHHHHh---------------------h-----------------cCH-------HHH
Q 018919 269 RRGTDVFKALALGASGIFIGRPVVYSLA---------------------A-----------------EGE-------KGV 303 (349)
Q Consensus 269 ~~~~dv~kal~~GA~~V~ig~~~l~~~~---------------------~-----------------~G~-------~gv 303 (349)
+++.|+.|+|++|||+|++||+|+.... + .|. -.+
T Consensus 209 ~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~ 288 (361)
T 3r2g_A 209 KTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQMHEWKTAEGVATEVPFKENP 288 (361)
T ss_dssp CSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHHHHHHHHTTCCSTTCCSCCCCEEEECBCCH
T ss_pred CCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCcchhhhhhccccccccCCcceeecCCCCCH
Confidence 9999999999999999999999863211 0 010 137
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 018919 304 RRVLEMLREEFELAMALSGCRSLKEITRD 332 (349)
Q Consensus 304 ~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 332 (349)
.+++..+...|+..|.++|+.+|+||+..
T Consensus 289 ~~~~~~~~~glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 289 DGIIADIIGGLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhcCcccHHHHHhC
Confidence 88999999999999999999999999644
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=100.00 E-value=4e-32 Score=266.26 Aligned_cols=258 Identities=20% Similarity=0.238 Sum_probs=194.4
Q ss_pred hhcccccccccccC-CCCCCCcceeEc-CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH
Q 018919 41 NAFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (349)
Q Consensus 41 ~~~~~~~l~p~~l~-~~~~~d~s~~l~-g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~ 118 (349)
.+||+|.|+|+.+. +++++|++|+|+ |++++.||++|||++++ +..++.+++++|..++++ ++.++|++.
T Consensus 10 ~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~~~------~~ela~a~a~aGglg~i~--~~~s~e~~~ 81 (404)
T 1eep_A 10 LTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVT------ESQMAIAIAKEGGIGIIH--KNMSIEAQR 81 (404)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTC------SHHHHHHHHHHTSEEEEC--SSSCHHHHH
T ss_pred CCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCCCC------CHHHHHHHHHCCCEEEEC--CCCCHHHHH
Confidence 57999999999987 789999999999 99999999999998743 456777788889888886 345676653
Q ss_pred hhCC-----C----------------------------------------c-----------eEEEEeecCChhHHHHHH
Q 018919 119 STGP-----G----------------------------------------I-----------RFFQLYVYKDRNVVAQLV 142 (349)
Q Consensus 119 ~~~~-----~----------------------------------------~-----------~~~Ql~~~~~~~~~~~~~ 142 (349)
+..+ . + ....+. .+. ...+.+
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~--~~~-~~~~~a 158 (404)
T 1eep_A 82 KEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVS--IDI-DTIERV 158 (404)
T ss_dssp HHHHHHHTCC--------------------------------------CCTTCCBCTTSCBCCEEEEC--SCT-THHHHH
T ss_pred HHHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcchhhhhcccCceEEEEeC--CCh-hHHHHH
Confidence 3211 0 0 011111 011 234566
Q ss_pred HHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEEEecCHHHHHH
Q 018919 143 RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKGVLTAEDARI 220 (349)
Q Consensus 143 ~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~v~~~~~a~~ 220 (349)
+.+.++|+++++++..+ .++.. |+.++++|+.+ ++||+++.+.+.++|+.
T Consensus 159 ~~~~~~G~d~i~i~~~~----------------------------g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~ 210 (404)
T 1eep_A 159 EELVKAHVDILVIDSAH----------------------------GHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALD 210 (404)
T ss_dssp HHHHHTTCSEEEECCSC----------------------------CSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHH
T ss_pred HHHHHCCCCEEEEeCCC----------------------------CChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHH
Confidence 67777888888764321 13455 88999999999 89999999999999999
Q ss_pred HHHcCCCEEEEecCCCCC------CCCchhhHHHHHHHHHHhc-CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH-
Q 018919 221 AVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV- 292 (349)
Q Consensus 221 a~~~G~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~-~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l- 292 (349)
+.++|+|+|+++.++|.. ...+.+.++.+.++.+.++ .++|||++|||++++|+.|++++|||+|++||+|+
T Consensus 211 a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~ 290 (404)
T 1eep_A 211 LISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAG 290 (404)
T ss_dssp HHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHT
T ss_pred HHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhc
Confidence 999999999996544431 1234557788888887654 37999999999999999999999999999999994
Q ss_pred -------------------HHHhh-------------------------cCHHH-------HHHHHHHHHHHHHHHHHHc
Q 018919 293 -------------------YSLAA-------------------------EGEKG-------VRRVLEMLREEFELAMALS 321 (349)
Q Consensus 293 -------------------~~~~~-------------------------~G~~g-------v~~~l~~l~~el~~~m~~~ 321 (349)
++++. .|.++ |.++++.+.+||+..|.++
T Consensus 291 ~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~g~~~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~ 370 (404)
T 1eep_A 291 TKESPSEEIIYNGKKFKSYVGMGSISAMKRGSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYL 370 (404)
T ss_dssp BTTSSSCEEEETTEEEEC------------------------------------CEECCBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcchhhhCCeEEeecCCCCCHHHHhhccccchhcccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHh
Confidence 44432 22333 8899999999999999999
Q ss_pred CCCChhhhcccceecc
Q 018919 322 GCRSLKEITRDHIVTE 337 (349)
Q Consensus 322 G~~~i~~l~~~~l~~~ 337 (349)
|+++++||++..+..+
T Consensus 371 G~~~i~~l~~~~~~~~ 386 (404)
T 1eep_A 371 GAATISDLKINSKFVK 386 (404)
T ss_dssp TCSSHHHHHHSCCEEE
T ss_pred CCCCHHHHhhcCcEEE
Confidence 9999999998766543
No 16
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.95 E-value=8.5e-27 Score=224.48 Aligned_cols=251 Identities=20% Similarity=0.261 Sum_probs=189.6
Q ss_pred hhccccccccccc-CCCCCCCcceeEc-CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH
Q 018919 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (349)
Q Consensus 41 ~~~~~~~l~p~~l-~~~~~~d~s~~l~-g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~ 118 (349)
.+||++.|+|+.- ...+++|++|+|. ++.+..||++|||++.+ +..||.++++.|...++.. ..+++++.
T Consensus 13 ~~fddv~l~p~~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt------~~~lA~avA~~GGlgii~~--~~s~e~~~ 84 (361)
T 3khj_A 13 LTFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK--NMDMESQV 84 (361)
T ss_dssp CCGGGEEECCCCBCCCGGGCCCCEESSSSCEESSSEEECSSTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CCcceEEEECCCCCCCHHHccCceecccccccCCCEEeecCCCCC------cHHHHHHHHHcCCCeEEec--CCCHHHHH
Confidence 4799999999832 2456899999997 78999999999998764 5589998787777767753 34555432
Q ss_pred ----hh--CC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc
Q 018919 119 ----ST--GP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK 191 (349)
Q Consensus 119 ----~~--~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~ 191 (349)
+. .+ .+..+++... + .+.++.+.++|++.|.|+... .++.
T Consensus 85 ~~I~~vk~~~~~pvga~ig~~-~----~e~a~~l~eaGad~I~ld~a~----------------------------G~~~ 131 (361)
T 3khj_A 85 NEVLKVKNSGGLRVGAAIGVN-E----IERAKLLVEAGVDVIVLDSAH----------------------------GHSL 131 (361)
T ss_dssp HHHHHHHHTTCCCCEEEECTT-C----HHHHHHHHHTTCSEEEECCSC----------------------------CSBH
T ss_pred HHHHHHHhccCceEEEEeCCC-H----HHHHHHHHHcCcCeEEEeCCC----------------------------CCcH
Confidence 22 12 3456666542 2 567888899999988765421 1233
Q ss_pred h-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC------CCCchhhHHHHHHHHHHhcC-CCcEE
Q 018919 192 M-DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVF 263 (349)
Q Consensus 192 ~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~~-~ipvi 263 (349)
. .+.++++++.+++||+++.+.+++.++.+.++|+|+|+++.++|.. ...+.+++..+.++++.++. ++|||
T Consensus 132 ~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVI 211 (361)
T 3khj_A 132 NIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPII 211 (361)
T ss_dssp HHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEE
Confidence 3 5779999998899999999999999999999999999996544421 12356778888888665422 79999
Q ss_pred EecCCCCHHHHHHHHHhCCCEEEEchHHH--------------------HHHhhc--------------C-------HH-
Q 018919 264 LDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAE--------------G-------EK- 301 (349)
Q Consensus 264 a~GGI~~~~dv~kal~~GA~~V~ig~~~l--------------------~~~~~~--------------G-------~~- 301 (349)
++|||++++|+.|++++|||+|++||+|+ |++++. + ++
T Consensus 212 A~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~~~~~~~y~~~~~~~~~~~~eg 291 (361)
T 3khj_A 212 ADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEG 291 (361)
T ss_dssp EESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEEEEETTEEEEEC-------------------------------
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcchhhcCCeEEEEeeccchHHHHhccchhhhhcccccccccCCCc
Confidence 99999999999999999999999999884 333210 1 12
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 018919 302 ---------GVRRVLEMLREEFELAMALSGCRSLKEITRD 332 (349)
Q Consensus 302 ---------gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 332 (349)
.+++++..+...|+..|.++|+.+|+||+..
T Consensus 292 ~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~ 331 (361)
T 3khj_A 292 IEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 331 (361)
T ss_dssp --CEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred cEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCccHHHHHhC
Confidence 2678899999999999999999999999754
No 17
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.95 E-value=3e-26 Score=222.37 Aligned_cols=256 Identities=20% Similarity=0.277 Sum_probs=185.2
Q ss_pred hhccccccccccc-CCCCCCCcceeEc-CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH
Q 018919 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (349)
Q Consensus 41 ~~~~~~~l~p~~l-~~~~~~d~s~~l~-g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~ 118 (349)
.+||++.|+|... ...+++|++|.|. .+.+..||+.|||++.+ . ..||.+.+++|..++++. ..++|+++
T Consensus 10 ~t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~Vs--~----~~lA~Ava~aGGlGvi~~--~~~~e~~~ 81 (400)
T 3ffs_A 10 LTFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT--E----HLMAVGMARLGGIGIIHK--NMDMESQV 81 (400)
T ss_dssp CCGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTTC--S----SHHHHHHHTTTCEEEECS--SSCHHHHH
T ss_pred CCceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCcC--c----HHHHHHHHHCCCEEEeCC--CCCHHHHH
Confidence 3699999999754 3457899999996 57889999999998654 3 489999999999999975 45666543
Q ss_pred hh----C---C----CceE--EEEe------------------ecC--Chh-----------HHHHHHHHHHHcCCCEEE
Q 018919 119 ST----G---P----GIRF--FQLY------------------VYK--DRN-----------VVAQLVRRAERAGFKAIA 154 (349)
Q Consensus 119 ~~----~---~----~~~~--~Ql~------------------~~~--~~~-----------~~~~~~~~~~~~G~~~i~ 154 (349)
+. . . .|+- .+|+ +.. |.. ...+.++.+.++|++.|+
T Consensus 82 ~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~~e~~~~lveaGvdvIv 161 (400)
T 3ffs_A 82 NEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIV 161 (400)
T ss_dssp HHHHHHHCCC-------------------------------CCTTCCBCTTSSBCCEEEECCC-CHHHHHHHHHTCSEEE
T ss_pred HHHHHHHhhccCcccCCCCccccccCCCCCHHHHHHHHHhhhCcchhhccccceeEEeecCCCHHHHHHHHHHcCCCEEE
Confidence 21 1 1 1111 1221 100 000 004667777888988887
Q ss_pred EecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEec
Q 018919 155 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 155 i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
++... .++.. .+.++++++.+++||+++.+.+.++|+.+.++|+|+|++++
T Consensus 162 ldta~----------------------------G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~ 213 (400)
T 3ffs_A 162 LDSAH----------------------------GHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGI 213 (400)
T ss_dssp ECCSC----------------------------CSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC
T ss_pred EeCCC----------------------------CCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeC
Confidence 64321 12323 57899999988999999999999999999999999999954
Q ss_pred CCCC-----CC-CCchhhHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH--------------
Q 018919 234 HGAR-----QL-DYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV-------------- 292 (349)
Q Consensus 234 ~gg~-----~~-~~~~~~~~~l~~i~~~~~~-~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l-------------- 292 (349)
.+|. .. ..+.+++..+.++++.++. ++|||++|||+++.|+.|+|++||++||+|++|+
T Consensus 214 g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es~~~~~~~~g 293 (400)
T 3ffs_A 214 GPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGD 293 (400)
T ss_dssp ---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTSSCCEEESSS
T ss_pred CCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCCCchhhhcCC
Confidence 3331 11 2356788999999887643 7999999999999999999999999999999884
Q ss_pred ------HHHhhc--------------C-------HHH----------HHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 018919 293 ------YSLAAE--------------G-------EKG----------VRRVLEMLREEFELAMALSGCRSLKEITRD 332 (349)
Q Consensus 293 ------~~~~~~--------------G-------~~g----------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 332 (349)
|++++. + ++| +.+++..+...|+..|.++|+.+|+||+..
T Consensus 294 ~~~k~y~Gm~s~~am~~~~~~ry~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~~~y~G~~~i~el~~~ 370 (400)
T 3ffs_A 294 TVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 370 (400)
T ss_dssp SEEEC-----------------------------------CEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred eeeeeecCcchHHHHhccccchhhcccccccccCCCCcEEecCCCCCHHHHHHHHHHHHHHhhhhcCcccHHHHHhC
Confidence 444310 0 122 678899999999999999999999999754
No 18
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.95 E-value=2e-26 Score=221.74 Aligned_cols=255 Identities=20% Similarity=0.252 Sum_probs=190.7
Q ss_pred hhccccccccccc-CCCCCCCcceeEc-CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH
Q 018919 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (349)
Q Consensus 41 ~~~~~~~l~p~~l-~~~~~~d~s~~l~-g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~ 118 (349)
.+||++.|+|..- .+.+++|++|+|. .+.+..||+.|||++.+ +..||.++++.|...++.. +.++++..
T Consensus 14 ~~fddv~lvp~~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs------~~~lA~avA~aGGlg~i~~--~~s~e~~~ 85 (366)
T 4fo4_A 14 LTFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQA 85 (366)
T ss_dssp CCGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CCcceEEEECCCCCCChhhcccceecccccccCCCEEeCCCCCCC------hHHHHHHHHHcCCceEeec--CCCHHHHH
Confidence 3699999999733 2456899999997 68899999999998754 5689999888888888763 34565532
Q ss_pred h----hCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-
Q 018919 119 S----TGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM- 192 (349)
Q Consensus 119 ~----~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~- 192 (349)
+ ... +++.+.+-...++ ...+.++.+.++|++.|+|+... .++..
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~~-~~~~~~~~lieaGvd~I~idta~----------------------------G~~~~~ 136 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAAP-GNEERVKALVEAGVDVLLIDSSH----------------------------GHSEGV 136 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSCT-TCHHHHHHHHHTTCSEEEEECSC----------------------------TTSHHH
T ss_pred HHHHHHHhcCceeEEEEeccCh-hHHHHHHHHHhCCCCEEEEeCCC----------------------------CCCHHH
Confidence 2 111 2222333221222 24567888899999998875421 01223
Q ss_pred HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC------CCCchhhHHHHHHHHHHhc-CCCcEEE
Q 018919 193 DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRIPVFL 264 (349)
Q Consensus 193 ~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~-~~ipvia 264 (349)
.+.++++++.+ ++||+++.+.++++|+.+.++|+|+|+++..+|.. ...+.+++..+.++++.++ .++|||+
T Consensus 137 ~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA 216 (366)
T 4fo4_A 137 LQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIA 216 (366)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEE
Confidence 56799999988 89999999999999999999999999995333321 1245678888888887643 2799999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchHHHH--------------------HHhh-----c---------C-------HH--
Q 018919 265 DGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAA-----E---------G-------EK-- 301 (349)
Q Consensus 265 ~GGI~~~~dv~kal~~GA~~V~ig~~~l~--------------------~~~~-----~---------G-------~~-- 301 (349)
+|||+++.|+.|+|++||++|++|++|+. ++++ + + ++
T Consensus 217 ~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~~~~ry~~~~~~~~~~~~eg~ 296 (366)
T 4fo4_A 217 DGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGI 296 (366)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC---------------CCCSBC
T ss_pred eCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhhhCCceeEEeeccccHHHHhcccccchhccccccccccCCCc
Confidence 99999999999999999999999998852 2210 0 0 01
Q ss_pred --------HHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 018919 302 --------GVRRVLEMLREEFELAMALSGCRSLKEITRD 332 (349)
Q Consensus 302 --------gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 332 (349)
.+++++..+...|+..|.++|+.+|+||++.
T Consensus 297 ~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~ 335 (366)
T 4fo4_A 297 EGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 335 (366)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHHhhhccCcccHHHHHhC
Confidence 2778999999999999999999999999854
No 19
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.94 E-value=2.1e-25 Score=211.43 Aligned_cols=241 Identities=18% Similarity=0.180 Sum_probs=183.6
Q ss_pred CCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCC-C--------------------------C
Q 018919 59 IDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW-S--------------------------T 111 (349)
Q Consensus 59 ~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~-~--------------------------~ 111 (349)
+|++++++|+++++||++|++.. +. +..+.+.+.+.|+.+++..+ + +
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~~----~~--~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGVL----CS--TEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTSS----CS--SHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCCC----CC--CHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 58999999999999999998542 12 33556778999988765422 1 1
Q ss_pred CCHH----HHHhh-C-C-CceEEEEeecCChhHHHHHHHHHHHcCCC---EEEEecCCCCCCchhHHhhhhcCCCCcCcc
Q 018919 112 SSVE----EVAST-G-P-GIRFFQLYVYKDRNVVAQLVRRAERAGFK---AIALTVDTPRLGRREADIKNRFTLPPFLTL 181 (349)
Q Consensus 112 ~~~e----~i~~~-~-~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~---~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~ 181 (349)
...+ ++... . + .+.++|+.. .+.+...+.+++++++|++ ++++|+.||.. .+.+
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~g-~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g~~-------------- 139 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSISG-LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PGKP-------------- 139 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TTCC--------------
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeCC-CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CCch--------------
Confidence 1122 23322 2 2 578889875 5778888999999999999 99999999864 1110
Q ss_pred cccCCCCCCch-HHHHHHHHHhcCCcEEEEEec--CHHH----HHHHHHcC-CCEEEEecCCCC--CCC-----------
Q 018919 182 KNFQGLDLGKM-DEDVKWLQTITKLPILVKGVL--TAED----ARIAVQAG-AAGIIVSNHGAR--QLD----------- 240 (349)
Q Consensus 182 ~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~--~~~~----a~~a~~~G-~d~I~v~~~gg~--~~~----------- 240 (349)
.+ ..+++. ++.++++|+.+++||++|... +.++ ++.+.++| +|+|+++|+.++ ..+
T Consensus 140 -~~--g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~ 216 (314)
T 2e6f_A 140 -QV--AYDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPK 216 (314)
T ss_dssp -CG--GGSHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGG
T ss_pred -hh--cCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccC
Confidence 00 124555 788999999999999999874 4444 78889999 999999886521 000
Q ss_pred ------Cc----hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHH
Q 018919 241 ------YV----PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEML 310 (349)
Q Consensus 241 ------~~----~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l 310 (349)
.| +..++.+.++++.+ .++|||++|||++++|+.++|++|||+|++||++++ +|+ .+++.+
T Consensus 217 ~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~----~~p----~~~~~i 287 (314)
T 2e6f_A 217 QGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQE----EGP----GIFTRL 287 (314)
T ss_dssp GGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHH----HCT----THHHHH
T ss_pred cCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHh----cCc----HHHHHH
Confidence 12 23468888888887 579999999999999999999999999999999996 245 378899
Q ss_pred HHHHHHHHHHcCCCChhhhcccc
Q 018919 311 REEFELAMALSGCRSLKEITRDH 333 (349)
Q Consensus 311 ~~el~~~m~~~G~~~i~~l~~~~ 333 (349)
.++++.+|...|+++++|+++..
T Consensus 288 ~~~l~~~~~~~g~~~i~~~~g~~ 310 (314)
T 2e6f_A 288 EDELLEIMARKGYRTLEEFRGRV 310 (314)
T ss_dssp HHHHHHHHHHHTCCSSTTTTTCC
T ss_pred HHHHHHHHHHcCCCCHHHHhchH
Confidence 99999999999999999998764
No 20
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.94 E-value=4.9e-25 Score=211.18 Aligned_cols=250 Identities=16% Similarity=0.101 Sum_probs=180.9
Q ss_pred ccccCCCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEe-cCCCC-----------------
Q 018919 50 PRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWST----------------- 111 (349)
Q Consensus 50 p~~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~-~~~~~----------------- 111 (349)
|+.-..+++.|++++++|++|++||++|+= ..+ .+....+.+...|..+++ .+.+.
T Consensus 26 ~~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG-~~~-----~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~ 99 (354)
T 4ef8_A 26 GGQQMGRGSMSLQVNLLNNTFANPFMNAAG-VMC-----TTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLG 99 (354)
T ss_dssp --------CCCCCEEETTEEESSSEEECTT-SSC-----SSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTE
T ss_pred chhhcCCCCCCcceEECCEECCCCCEeccC-CCC-----CCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchh
Confidence 444456788999999999999999999982 211 245677888888877654 22110
Q ss_pred ---------CCHH----HHHhhC--C-CceEEEEeecCChhHHHHHHHHHH---HcCCCEEEEecCCCCCCchhHHhhhh
Q 018919 112 ---------SSVE----EVASTG--P-GIRFFQLYVYKDRNVVAQLVRRAE---RAGFKAIALTVDTPRLGRREADIKNR 172 (349)
Q Consensus 112 ---------~~~e----~i~~~~--~-~~~~~Ql~~~~~~~~~~~~~~~~~---~~G~~~i~i~~d~p~~g~r~~d~~~~ 172 (349)
..++ ++.+.. + .+.++||+. .+++...+.+++++ +.|+++|+||+.||..
T Consensus 100 ~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~G-~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~---------- 168 (354)
T 4ef8_A 100 SINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG-LSMRENVEMCKRLAAVATEKGVILELNLSCPNV---------- 168 (354)
T ss_dssp EEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS----------
T ss_pred hhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEecc-CCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC----------
Confidence 1222 333322 2 578899976 57888888888888 5799999999999963
Q ss_pred cCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecC--HHH----HHHHHHcC-CCEEEEecCC---------
Q 018919 173 FTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLT--AED----ARIAVQAG-AAGIIVSNHG--------- 235 (349)
Q Consensus 173 ~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~--~~~----a~~a~~~G-~d~I~v~~~g--------- 235 (349)
| + .+.+ ..+++. .+.++++++.+++||++|+... .++ ++.+.++| +|+|+++|+.
T Consensus 169 ---~-g--g~~l--~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~ 240 (354)
T 4ef8_A 169 ---P-G--KPQV--AYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAE 240 (354)
T ss_dssp ---T-T--SCCG--GGSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETT
T ss_pred ---C-C--chhh--ccCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeecc
Confidence 1 1 0111 135566 7889999999999999999854 222 34455887 9999987753
Q ss_pred -CC------CCCC---c----hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHH
Q 018919 236 -AR------QLDY---V----PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 301 (349)
Q Consensus 236 -g~------~~~~---~----~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~ 301 (349)
.+ +..+ | +.+++.+.++++.. .++|||++|||++++|+.+++++|||+||+||++++ +|+
T Consensus 241 ~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~-~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~----~GP- 314 (354)
T 4ef8_A 241 TESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE----EGP- 314 (354)
T ss_dssp TTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHH----HCT-
T ss_pred CCccccccccccCCCCCCCCchHHHHHHHHHHHhC-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHH----hCH-
Confidence 11 0111 2 34678899988873 479999999999999999999999999999999987 355
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 018919 302 GVRRVLEMLREEFELAMALSGCRSLKEITRDH 333 (349)
Q Consensus 302 gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 333 (349)
.+++.+.++|+.+|...|+.+++|+++..
T Consensus 315 ---~~~~~i~~~l~~~m~~~G~~si~el~G~~ 343 (354)
T 4ef8_A 315 ---SIFERLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp ---THHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred ---HHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 36788999999999999999999999764
No 21
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.94 E-value=3.9e-25 Score=209.24 Aligned_cols=240 Identities=19% Similarity=0.182 Sum_probs=182.0
Q ss_pred cceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCC-CC------C--------------------
Q 018919 61 MNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWS-TS------S-------------------- 113 (349)
Q Consensus 61 ~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~-~~------~-------------------- 113 (349)
++++++|+++++||++|+... +. +..+.+.+.+.|+.+++..+. .. .
T Consensus 2 l~~~i~g~~l~npv~~Aag~~----~~--~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVH----CM--TIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTTSS----CS--SHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCCCC----CC--CHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 689999999999999997321 22 457778899999888764331 11 0
Q ss_pred HH----HHHh---hC--CCceEEEEeecCChhHHHHHHHHHHHcCCC-EEEEecCCCCCCchhHHhhhhcCCCCcCcccc
Q 018919 114 VE----EVAS---TG--PGIRFFQLYVYKDRNVVAQLVRRAERAGFK-AIALTVDTPRLGRREADIKNRFTLPPFLTLKN 183 (349)
Q Consensus 114 ~e----~i~~---~~--~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~-~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~ 183 (349)
.+ ++.. .. ..+.++|+.. .+.+...+.+++++++|++ +|++|++||.. .+.+ .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~g-~~~~~~~~~a~~~~~~g~d~~iein~~~P~~-~g~~---------------~ 138 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIAG-MSAAENIAMLKKIQESDFSGITELNLSCPNV-PGEP---------------Q 138 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEECC-SSHHHHHHHHHHHHHSCCCSEEEEESCCCCS-SSCC---------------C
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcCC-CCHHHHHHHHHHHHhcCCCeEEEEeccCCCC-CCcc---------------c
Confidence 22 2222 22 3567889875 5778888999999999999 99999999864 1110 0
Q ss_pred cCCCCCCch-HHHHHHHHHhcCCcEEEEEecC--HH----HHHHHHHcCCCEEEEecCCC--CCCC--------------
Q 018919 184 FQGLDLGKM-DEDVKWLQTITKLPILVKGVLT--AE----DARIAVQAGAAGIIVSNHGA--RQLD-------------- 240 (349)
Q Consensus 184 ~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~--~~----~a~~a~~~G~d~I~v~~~gg--~~~~-------------- 240 (349)
+ ..+++. ++.++++|+.+++||++|...+ .+ .|+.+.++|+|+|+++|+.+ .+.+
T Consensus 139 ~--g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~ 216 (311)
T 1jub_A 139 L--AYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGF 216 (311)
T ss_dssp G--GGCHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGE
T ss_pred c--cCCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCC
Confidence 0 124555 7889999998899999998753 32 27888999999999988641 1111
Q ss_pred ---Cch----hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHH
Q 018919 241 ---YVP----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREE 313 (349)
Q Consensus 241 ---~~~----~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~e 313 (349)
.|+ .+++.+.++++.+++++|||++|||++++|+.+++++|||+|++||++++ .|+ .+++.+.++
T Consensus 217 gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~----~~p----~~~~~i~~~ 288 (311)
T 1jub_A 217 GGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK----EGP----AIFDRIIKE 288 (311)
T ss_dssp EEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH----HCT----HHHHHHHHH
T ss_pred CccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh----cCc----HHHHHHHHH
Confidence 122 24678888887776589999999999999999999999999999999996 245 478899999
Q ss_pred HHHHHHHcCCCChhhhcccc
Q 018919 314 FELAMALSGCRSLKEITRDH 333 (349)
Q Consensus 314 l~~~m~~~G~~~i~~l~~~~ 333 (349)
++.+|...|+++++|+++..
T Consensus 289 l~~~l~~~g~~si~e~~g~~ 308 (311)
T 1jub_A 289 LEEIMNQKGYQSIADFHGKL 308 (311)
T ss_dssp HHHHHHHHTCCSGGGTTTCC
T ss_pred HHHHHHHcCCCCHHHHhChh
Confidence 99999999999999998764
No 22
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.93 E-value=9.5e-25 Score=215.26 Aligned_cols=140 Identities=23% Similarity=0.351 Sum_probs=117.8
Q ss_pred HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC------CCCchhhHHHHHHHHHHhcC-CCcEEE
Q 018919 193 DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFL 264 (349)
Q Consensus 193 ~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~~-~ipvia 264 (349)
.+.++++|+.+ ++||++..+.+.+.++.++++|||+|.|.-.+|.- ...|.|++.++.+++++.++ .+|||+
T Consensus 310 ~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIA 389 (556)
T 4af0_A 310 IEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIA 389 (556)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEe
Confidence 78899999988 79999999999999999999999999997655531 23477899999999887643 699999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchHHH--------------------HHHhh-----c---------------------
Q 018919 265 DGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAA-----E--------------------- 298 (349)
Q Consensus 265 ~GGI~~~~dv~kal~~GA~~V~ig~~~l--------------------~~~~~-----~--------------------- 298 (349)
||||+++.|++|||++|||+||+|+.|- |++++ +
T Consensus 390 DGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~~~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~~~~~s~d 469 (556)
T 4af0_A 390 DGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRGSASGKRSILGLDNAATA 469 (556)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHTTC------------CCSCSSEE
T ss_pred cCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCcEEEECCEEEEeecccccHHHHHhcccCCcccccccccccccchh
Confidence 9999999999999999999999999772 22211 0
Q ss_pred -------------CH-------HHHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 018919 299 -------------GE-------KGVRRVLEMLREEFELAMALSGCRSLKEITRD 332 (349)
Q Consensus 299 -------------G~-------~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 332 (349)
|. -.+.+++..+...|+..|.++|+.+|+||+..
T Consensus 470 Ryfq~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~~ 523 (556)
T 4af0_A 470 RYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSC 523 (556)
T ss_dssp ECCCBSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred hhcccccccccCCccEEeccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHHh
Confidence 00 02788999999999999999999999999864
No 23
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.93 E-value=5.1e-25 Score=238.12 Aligned_cols=279 Identities=19% Similarity=0.149 Sum_probs=198.7
Q ss_pred HHhhcccccccccccC--CCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHH
Q 018919 39 NRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE 116 (349)
Q Consensus 39 n~~~~~~~~l~p~~l~--~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~ 116 (349)
...+|+++.+.+..+. +++++++++ ++..||+++||+++.+ +++.+.+||++|++.|+.+.+++.+ .+.++
T Consensus 821 ~~~~~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~Gal-S~ea~~aLA~Aa~~aGg~~~tGeGg-~~pe~ 893 (1479)
T 1ea0_A 821 PPMQLRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGAL-SPEAHGTLNVAMNRIGAKSDSGEGG-EDPAR 893 (1479)
T ss_dssp CCCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTTB-CHHHHHHHHHHHHHTTCEEECCTTC-CCGGG
T ss_pred CCCchhhhhhccCCCCCCCcccccccc-----cccCCeEecCcccccc-CHHHHHHHHHHHHHcCCeeEcCCCc-cCHHH
Confidence 3456888888877664 345677666 5688999999998755 5678889999999999998888754 34444
Q ss_pred HHhh--C--CCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCC--------Cchh-HHhhhhcCCCCcCcccc
Q 018919 117 VAST--G--PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL--------GRRE-ADIKNRFTLPPFLTLKN 183 (349)
Q Consensus 117 i~~~--~--~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~--------g~r~-~d~~~~~~~p~~~~~~~ 183 (349)
.... . ....+.|+.. .........+ ..++.+++.+..-.. +.+. ..+......+.++..-.
T Consensus 894 ~~~~~~g~~~~~~IrQ~as-g~FGVn~~~l-----~~a~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv~lis 967 (1479)
T 1ea0_A 894 FRPDKNGDNWNSAIKQVAS-GRFGVTAEYL-----NQCRELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLIS 967 (1479)
T ss_dssp SSBCTTSCBCCCSEEEECS-SCTTCCHHHH-----TSCSEEEEECCCTTSTTTCCEECGGGCCHHHHHHHTCCTTCCEEC
T ss_pred hhhccccchhhhhhhhhcC-CCCCcChHHc-----cccchHHHHHhccCCCCcCCCCCHHHHHHHHHHHcCCCCCCCccC
Confidence 3211 1 1224677753 2222222222 467889988843111 1111 11111112233322111
Q ss_pred cC---CCCCCch-HHHHHHHHHhc-CCcEEEEEecC---HHHHHHHHHcCCCEEEEecCC-CCC-------CCCchhhHH
Q 018919 184 FQ---GLDLGKM-DEDVKWLQTIT-KLPILVKGVLT---AEDARIAVQAGAAGIIVSNHG-ARQ-------LDYVPATIM 247 (349)
Q Consensus 184 ~~---~~~~~~~-~~~i~~i~~~~-~~pv~vK~v~~---~~~a~~a~~~G~d~I~v~~~g-g~~-------~~~~~~~~~ 247 (349)
.. .+.+++. .+.|+++|+.+ ++||++|++.+ .++|+.+.++|||+|+++|++ |+. .++|.|+..
T Consensus 968 P~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~ 1047 (1479)
T 1ea0_A 968 PPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEM 1047 (1479)
T ss_dssp CSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHH
T ss_pred CCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHH
Confidence 00 1112222 45699999988 89999999863 678999999999999999984 431 235678889
Q ss_pred HHHHHHHHh-----cCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhh-------------------------
Q 018919 248 ALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA------------------------- 297 (349)
Q Consensus 248 ~l~~i~~~~-----~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~------------------------- 297 (349)
.|+++.+.+ ++++|||++|||+++.|++|+|++||++|++||+|+++++|
T Consensus 1048 aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~ 1127 (1479)
T 1ea0_A 1048 GLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQK 1127 (1479)
T ss_dssp HHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGS
T ss_pred HHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhh
Confidence 999998875 34799999999999999999999999999999999998753
Q ss_pred --cCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhc
Q 018919 298 --EGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 330 (349)
Q Consensus 298 --~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~ 330 (349)
.|+++|.++++.+.+||+.+|..+|+++++||.
T Consensus 1128 ~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~ 1162 (1479)
T 1ea0_A 1128 FVGTPEKVVNLFTFLAEEVREILAGLGFRSLNEVI 1162 (1479)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCSCSGGGT
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHhCCCCHHHHh
Confidence 367899999999999999999999999999994
No 24
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.93 E-value=1.2e-24 Score=235.35 Aligned_cols=249 Identities=21% Similarity=0.279 Sum_probs=190.9
Q ss_pred CCCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEe-cCCC-------CC-------------
Q 018919 54 IDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWS-------TS------------- 112 (349)
Q Consensus 54 ~~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~-~~~~-------~~------------- 112 (349)
..++++|++++++|+++++||++|||++.. +.++++.+.+.|..+++ .+.+ +.
T Consensus 526 ~ev~~v~ls~~~~G~~~~nPv~lAa~~~~~------~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~ 599 (1025)
T 1gte_A 526 TPVDLVDISVEMAGLKFINPFGLASAAPTT------SSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPM 599 (1025)
T ss_dssp CGGGGCCCCEEETTEEESSSEEECSSGGGS------SHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSC
T ss_pred cccccccceeeeccccccCcccccCCCCCC------CHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccc
Confidence 456889999999999999999999997643 55778888888888776 1111 00
Q ss_pred -----------------C-------HHHHHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhH
Q 018919 113 -----------------S-------VEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA 167 (349)
Q Consensus 113 -----------------~-------~e~i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~ 167 (349)
. ++++++..| .+.++|++...+.+...+.+++++++|+++|+||++||.. .+.+
T Consensus 600 ~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~ 678 (1025)
T 1gte_A 600 YGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGER 678 (1025)
T ss_dssp CSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC--
T ss_pred cCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCC
Confidence 1 123344454 6788888766788888999999999999999999999863 2211
Q ss_pred HhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecC----HHHHHHHHHcCCCEEEEecC--------
Q 018919 168 DIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLT----AEDARIAVQAGAAGIIVSNH-------- 234 (349)
Q Consensus 168 d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~----~~~a~~a~~~G~d~I~v~~~-------- 234 (349)
.. +... ..++++ ++.++++++.+++||++|+..+ .+.|+.+.++|+|+|+++|+
T Consensus 679 ~~----------G~~~---~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~ 745 (1025)
T 1gte_A 679 GM----------GLAC---GQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLK 745 (1025)
T ss_dssp -------------SBG---GGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBC
T ss_pred Cc----------cccc---ccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEecccccccccc
Confidence 10 0000 135666 7889999999999999999864 35689999999999999873
Q ss_pred ------------CCCCCC--Cchhh----HHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHh
Q 018919 235 ------------GARQLD--YVPAT----IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 296 (349)
Q Consensus 235 ------------gg~~~~--~~~~~----~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~ 296 (349)
|++... .+++. ++.+.++++.+ .++|||++|||++++|+.++|++|||+|+|||++++
T Consensus 746 ~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~-~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~--- 821 (1025)
T 1gte_A 746 ADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL-PGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQN--- 821 (1025)
T ss_dssp TTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS-TTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT---
T ss_pred ccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc-CCCCEEEecCcCCHHHHHHHHHcCCCEEEEeecccc---
Confidence 222111 13332 47888888877 469999999999999999999999999999999985
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcc
Q 018919 297 AEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 331 (349)
Q Consensus 297 ~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~ 331 (349)
.+. .+++.+.+||+.+|...|+.+++++..
T Consensus 822 -~~~----~~~~~~~~~l~~~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 822 -QDF----TVIQDYCTGLKALLYLKSIEELQGWDG 851 (1025)
T ss_dssp -SCT----THHHHHHHHHHHHHHHTTCGGGTTSBT
T ss_pred -CCc----cHHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 244 467889999999999999999999986
No 25
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.92 E-value=9.1e-24 Score=205.14 Aligned_cols=244 Identities=19% Similarity=0.202 Sum_probs=173.3
Q ss_pred CCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEE-ecCCCCC----------------------
Q 018919 56 VSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSSWSTS---------------------- 112 (349)
Q Consensus 56 ~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~-~~~~~~~---------------------- 112 (349)
.+.+.++++++|+++++||++|+ |.. ..+ .......+.|..++ +++.+..
T Consensus 79 ~~~~~l~v~~~Gl~f~NPvglAA-G~d----k~~--~~~~~l~~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~ 151 (415)
T 3i65_A 79 NDSIYACTNIKHLDFINPFGVAA-GFD----KNG--VCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINS 151 (415)
T ss_dssp CCCGGGCEEETTEEESSSEEECT-TSS----TTC--SSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEEC
T ss_pred cccccccEEECCEECCCCCEECC-CCC----CCH--HHHHHHHHcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeec
Confidence 34566899999999999999998 332 222 33466678887655 3322210
Q ss_pred ------CH----HHHHhh---C-------CCceEEEEeecCC----hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHH
Q 018919 113 ------SV----EEVAST---G-------PGIRFFQLYVYKD----RNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD 168 (349)
Q Consensus 113 ------~~----e~i~~~---~-------~~~~~~Ql~~~~~----~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d 168 (349)
.+ +++.+. . ..+..+||..+++ .+...+.++++.+. +++|+||++||...
T Consensus 152 ~GfnN~G~d~~~~~l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~----- 225 (415)
T 3i65_A 152 CGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTP----- 225 (415)
T ss_dssp CCSCBCCHHHHHHHHHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC-------
T ss_pred CCCCchhHHHHHHHHHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCC-----
Confidence 12 222211 0 1346789876542 34445555565555 89999999999631
Q ss_pred hhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHh--------------------cCCc-EEEEEecCH------HHHHH
Q 018919 169 IKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTI--------------------TKLP-ILVKGVLTA------EDARI 220 (349)
Q Consensus 169 ~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~--------------------~~~p-v~vK~v~~~------~~a~~ 220 (349)
+ .+. +.+++. .+.++++++. .++| |++|+..+. +.|+.
T Consensus 226 ---------G--l~~---lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~ 291 (415)
T 3i65_A 226 ---------G--LRD---NQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADV 291 (415)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHH
T ss_pred ---------C--ccc---ccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 1 111 246666 5667777765 2689 999998532 45888
Q ss_pred HHHcCCCEEEEecCCCCCCC--------C---c----hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEE
Q 018919 221 AVQAGAAGIIVSNHGARQLD--------Y---V----PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGI 285 (349)
Q Consensus 221 a~~~G~d~I~v~~~gg~~~~--------~---~----~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V 285 (349)
+.++|+|+|+++|+...+.+ + | +.+++.+.++++.+++++|||++|||+|++|+.+++++|||+|
T Consensus 292 a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~V 371 (415)
T 3i65_A 292 LLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVC 371 (415)
T ss_dssp HHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEE
T ss_pred HHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 99999999999998654322 2 3 2356889999998877899999999999999999999999999
Q ss_pred EEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccce
Q 018919 286 FIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 334 (349)
Q Consensus 286 ~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l 334 (349)
+|||++++. |+. +++.+.++|+.+|...|+++++|+++...
T Consensus 372 qIgra~l~~----GP~----~~~~i~~~L~~~l~~~G~~si~e~~G~~~ 412 (415)
T 3i65_A 372 QLYSCLVFN----GMK----SAVQIKRELNHLLYQRGYYNLKEAIGRKH 412 (415)
T ss_dssp EESHHHHHH----GGG----HHHHHHHHHHHHHHHTTCSSSTTTTTTTC
T ss_pred EEcHHHHhc----CHH----HHHHHHHHHHHHHHHcCCCCHHHHhChhc
Confidence 999999973 553 67889999999999999999999987643
No 26
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.92 E-value=6.2e-24 Score=230.10 Aligned_cols=282 Identities=18% Similarity=0.126 Sum_probs=196.3
Q ss_pred HhhcccccccccccC--CCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHH
Q 018919 40 RNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV 117 (349)
Q Consensus 40 ~~~~~~~~l~p~~l~--~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i 117 (349)
.-.|+++.+.+..+. ++++++.++ .+..||+++||+++.+ .++.+.+||.+|+++|+.+.+++.+. +.+..
T Consensus 839 ~~~~r~l~~~~~~~~~i~~~ev~~~~-----~I~~Pfii~aMS~Gsl-S~ea~~aLA~Aas~aGg~~~tGeGg~-~pe~~ 911 (1520)
T 1ofd_A 839 VTALRDLLDFNADQPAISLEEVESVE-----SIVKRFCTGGMSLGAL-SREAHETLAIAMNRLGAKSNSGEGGE-DVVRY 911 (1520)
T ss_dssp SCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEECCCBCTTTS-CHHHHHHHHHHHHHHTCBCEECTTCC-CGGGG
T ss_pred CcchhhhccccCCCCCCCchhhcccc-----cccCceEecCcCcccc-cHHHHHHHHHHHHHcCCceEeCCCCC-CHHHH
Confidence 446788887776554 345666655 5678999999998764 45678899999999999999987643 44443
Q ss_pred H-----------hhCC-----------CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCC--------CchhH
Q 018919 118 A-----------STGP-----------GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL--------GRREA 167 (349)
Q Consensus 118 ~-----------~~~~-----------~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~--------g~r~~ 167 (349)
. ...| ...+.|+-. .......+... .++.+++.+..-.. +.+..
T Consensus 912 ~~eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Ql~s-g~FGVn~~~l~-----~ad~IeIKi~QGAKpG~GG~Lp~~kV~ 985 (1520)
T 1ofd_A 912 LTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIAS-GRFGVTPEYLM-----SGKQLEIKMAQGAKPGEGGQLPGKKVS 985 (1520)
T ss_dssp SCCCCCCTTSCCTTSTTCCSCCTTCCCCCSEEEECT-TCTTCCHHHHH-----HCSEEEEECCCTTSTTSCCEECGGGCC
T ss_pred HhhhccccccccccccccccccCcchHHHHHHHhcC-CCCccChhhcc-----chHHHHHHHhccCCCCCCCCCCHHHHH
Confidence 2 0111 125678722 11122222221 27888888743211 11110
Q ss_pred -HhhhhcCCCCcCcccccC---CCCCCch-HHHHHHHHHhc-CCcEEEEEecC---HHHHHHHHHcCCCEEEEecCCC-C
Q 018919 168 -DIKNRFTLPPFLTLKNFQ---GLDLGKM-DEDVKWLQTIT-KLPILVKGVLT---AEDARIAVQAGAAGIIVSNHGA-R 237 (349)
Q Consensus 168 -d~~~~~~~p~~~~~~~~~---~~~~~~~-~~~i~~i~~~~-~~pv~vK~v~~---~~~a~~a~~~G~d~I~v~~~gg-~ 237 (349)
.+......++++..-... .+.+++. .+.|+++|+.+ ++||++|++.+ .++|+.+.++|||+|+++|++| +
T Consensus 986 ~~iA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGT 1065 (1520)
T 1ofd_A 986 EYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGT 1065 (1520)
T ss_dssp HHHHHHHTSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCC
T ss_pred HHHHHHcCCCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCcc
Confidence 111111223332221110 1122222 45699999988 89999999963 5789999999999999999954 3
Q ss_pred C-------CCCchhhHHHHHHHHHHh-----cCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhh--------
Q 018919 238 Q-------LDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA-------- 297 (349)
Q Consensus 238 ~-------~~~~~~~~~~l~~i~~~~-----~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~-------- 297 (349)
. .++|.|+...|+++.+++ ++++|||++|||+++.|++|||++||++|++||+|+++++|
T Consensus 1066 gasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~~r~Ch~ 1145 (1520)
T 1ofd_A 1066 GASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHT 1145 (1520)
T ss_dssp SSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCCCCCGGG
T ss_pred CCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHHHHhccC
Confidence 1 235677888999998875 34799999999999999999999999999999999998754
Q ss_pred -------------------cCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhc-ccce
Q 018919 298 -------------------EGEKGVRRVLEMLREEFELAMALSGCRSLKEIT-RDHI 334 (349)
Q Consensus 298 -------------------~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~-~~~l 334 (349)
.|+++|.++++.+.+||+.+|..+|+++++||. +..+
T Consensus 1146 ~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~dl 1202 (1520)
T 1ofd_A 1146 NNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDL 1202 (1520)
T ss_dssp TCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCGGG
T ss_pred CCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCcceE
Confidence 267899999999999999999999999999994 4443
No 27
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.92 E-value=3.1e-23 Score=199.95 Aligned_cols=251 Identities=19% Similarity=0.205 Sum_probs=172.0
Q ss_pred ccccccCCCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEe-cCCCC---------------
Q 018919 48 FRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWST--------------- 111 (349)
Q Consensus 48 l~p~~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~-~~~~~--------------- 111 (349)
+.|+. ...++.+++++++|+++++||++|+ |.. ..+ ...+...+.|..++. ++.+.
T Consensus 38 ~~~~~-~~~~~~~L~~~~~Gl~~~NPvglAa-G~~----~~~--~~~~~~~~~g~G~v~~ktvt~~pq~GNp~PR~~~~~ 109 (367)
T 3zwt_A 38 LLPRA-RFQDSDMLEVRVLGHKFRNPVGIAA-GFD----KHG--EAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLP 109 (367)
T ss_dssp CC----CCCCCGGGCEEETTEEESSSEEECT-TSS----TTS--SSHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEEG
T ss_pred ccccc-ccCCCCCCcEEECCEEcCCCCEeCC-CcC----CCH--HHHHHHHhcCcCeEEeCCccCCCCCCCCCCeEEEec
Confidence 44542 2356789999999999999999996 322 222 223444456776653 22211
Q ss_pred -------------CCH----HHHHhh---------CCCceEEEEeecCC-hhHHHHHHHHHHHc--CCCEEEEecCCCCC
Q 018919 112 -------------SSV----EEVAST---------GPGIRFFQLYVYKD-RNVVAQLVRRAERA--GFKAIALTVDTPRL 162 (349)
Q Consensus 112 -------------~~~----e~i~~~---------~~~~~~~Ql~~~~~-~~~~~~~~~~~~~~--G~~~i~i~~d~p~~ 162 (349)
..+ +++.+. ...+.++||..+.+ .+...+.++.++.. ++++|+||++||..
T Consensus 110 ~~~~~iN~~G~~N~G~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~ 189 (367)
T 3zwt_A 110 EDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNT 189 (367)
T ss_dssp GGTEEEECCCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTS
T ss_pred CccceeeccCCCCccHHHHHHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCC
Confidence 011 222221 12468899976432 12334444444333 58999999999964
Q ss_pred CchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHh-------cCCcEEEEEecCH------HHHHHHHHcCCCE
Q 018919 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTI-------TKLPILVKGVLTA------EDARIAVQAGAAG 228 (349)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~-------~~~pv~vK~v~~~------~~a~~a~~~G~d~ 228 (349)
. + .+. +.+++. .+.++.+++. +++||++|+..+. +.|+.+.++|+|+
T Consensus 190 ~--------------G--~~~---l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadg 250 (367)
T 3zwt_A 190 A--------------G--LRS---LQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDG 250 (367)
T ss_dssp T--------------T--GGG---GGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCE
T ss_pred C--------------C--ccc---cCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCE
Confidence 1 1 111 234444 4556766653 6899999998532 4578899999999
Q ss_pred EEEecCC-CCC---------CCC---ch----hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHH
Q 018919 229 IIVSNHG-ARQ---------LDY---VP----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 291 (349)
Q Consensus 229 I~v~~~g-g~~---------~~~---~~----~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~ 291 (349)
|+++|+. ++. ..+ |+ .+++.+.++++.+++++|||++|||+|++|+.+++++|||+||+||++
T Consensus 251 i~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~ 330 (367)
T 3zwt_A 251 LIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTAL 330 (367)
T ss_dssp EEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred EEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 9999874 221 112 22 256889999998877899999999999999999999999999999999
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 018919 292 VYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 333 (349)
Q Consensus 292 l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 333 (349)
++. |+ .++..+.++|+.+|...|+++++|+.+..
T Consensus 331 l~~----gP----~~~~~i~~~l~~~m~~~G~~~i~e~~G~~ 364 (367)
T 3zwt_A 331 TFW----GP----PVVGKVKRELEALLKEQGFGGVTDAIGAD 364 (367)
T ss_dssp HHH----CT----HHHHHHHHHHHHHHHHTTCSSHHHHTTGG
T ss_pred Hhc----Cc----HHHHHHHHHHHHHHHHcCCCCHHHhhCcc
Confidence 873 55 36788999999999999999999998764
No 28
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.92 E-value=3.3e-23 Score=197.99 Aligned_cols=242 Identities=15% Similarity=0.153 Sum_probs=179.7
Q ss_pred CCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEec-CCCCC------------------------
Q 018919 58 KIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SWSTS------------------------ 112 (349)
Q Consensus 58 ~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~-~~~~~------------------------ 112 (349)
..|++++++|+++++||++|+ +..+ .+....+.+...|..+++. +.+..
T Consensus 35 m~~L~~~~~Gl~~~NPv~lAa-G~~~-----~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~ 108 (345)
T 3oix_A 35 MVSTHTTIGSFDFDNCLMNAA-GVYC-----MTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLP 108 (345)
T ss_dssp -CCCCEEETTEEESCSEEECT-TSSC-----SSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCC
T ss_pred cCCcCeEECCEECCCCCEEcC-CCCC-----CCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCC
Confidence 468999999999999999996 2211 1346778888999877653 22110
Q ss_pred --CH----HHHHhh---C-CCceEEEEeecCChhHHHHHHHHHHHcCCC-EEEEecCCCCCCchhHHhhhhcCCCCcCcc
Q 018919 113 --SV----EEVAST---G-PGIRFFQLYVYKDRNVVAQLVRRAERAGFK-AIALTVDTPRLGRREADIKNRFTLPPFLTL 181 (349)
Q Consensus 113 --~~----e~i~~~---~-~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~-~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~ 181 (349)
.+ +++.+. . ..+.++||.. .+++...+.+++++++|++ +|+||+.||.. | + .
T Consensus 109 n~G~~~~~~~l~~~~~~~~~~pvivsI~g-~~~~d~~~~a~~l~~~g~~d~ielNisCPn~-------------~-G--~ 171 (345)
T 3oix_A 109 NLGINYYLDYVTELQKQPDSKNHFLSLVG-MSPEETHTILXMVEASKYQGLVELNLSCPNV-------------P-G--X 171 (345)
T ss_dssp BSCHHHHHHHHHHHHHSTTCCCCEEEECC-SSHHHHHHHHHHHHHSSCCSEEEEECSCCCS-------------T-T--C
T ss_pred ChhHHHHHHHHHHHhhccCCCCEEEEecC-CCHHHHHHHHHHHhccCCCcEEEEecCCCCc-------------C-C--c
Confidence 12 233331 2 2678899986 6788888999999989988 99999999963 1 1 1
Q ss_pred cccCCCCCCch-HHHHHHHHHhcCCcEEEEEecC---HHHHHHHHHcCCCEEEEecC-----------CCC-CC------
Q 018919 182 KNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLT---AEDARIAVQAGAAGIIVSNH-----------GAR-QL------ 239 (349)
Q Consensus 182 ~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~---~~~a~~a~~~G~d~I~v~~~-----------gg~-~~------ 239 (349)
..+ ..+++. .+.++++++.+++||++|+..+ .+.++.+.++|+++|.+.|. ..+ .+
T Consensus 172 ~~l--~~~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~ 249 (345)
T 3oix_A 172 PQI--AYDFETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGF 249 (345)
T ss_dssp CCG--GGCHHHHHHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGE
T ss_pred hhh--cCCHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCcccccccccc
Confidence 111 135566 6779999999999999999853 35577888888877754321 111 11
Q ss_pred --CCchh----hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHH
Q 018919 240 --DYVPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREE 313 (349)
Q Consensus 240 --~~~~~----~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~e 313 (349)
.+|++ +++.+.++++.+++++|||++|||++++|+.+++++|||+|||||+|++. |+ .+++.+.++
T Consensus 250 gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~----gP----~~~~~i~~~ 321 (345)
T 3oix_A 250 GGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQE----GP----QIFKRITKE 321 (345)
T ss_dssp EEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH----CT----HHHHHHHHH
T ss_pred CCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhc----Ch----HHHHHHHHH
Confidence 12333 36788888888766899999999999999999999999999999997763 56 367889999
Q ss_pred HHHHHHHcCCCChhhhccc
Q 018919 314 FELAMALSGCRSLKEITRD 332 (349)
Q Consensus 314 l~~~m~~~G~~~i~~l~~~ 332 (349)
|+.+|...|+++++|+++.
T Consensus 322 L~~~l~~~G~~si~e~~G~ 340 (345)
T 3oix_A 322 LXAIMTEKGYETLEDFRGK 340 (345)
T ss_dssp HHHHHHHHTCCSGGGTTTC
T ss_pred HHHHHHHcCCCCHHHHHhH
Confidence 9999999999999999875
No 29
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.91 E-value=6.9e-23 Score=205.88 Aligned_cols=140 Identities=24% Similarity=0.332 Sum_probs=113.8
Q ss_pred HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC------CCCchhhHHHHHHHHHHhcC-CCcEEE
Q 018919 193 DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFL 264 (349)
Q Consensus 193 ~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~~-~ipvia 264 (349)
++.++++++.+ ++||++|.+.+.+.|+.+.++|+|+|+++.++|.- ...+.+++..+.++++.++. ++|||+
T Consensus 285 ~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa 364 (511)
T 3usb_A 285 IDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIA 364 (511)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEE
T ss_pred hhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEE
Confidence 67899999998 48999999999999999999999999996555431 13457788888888776643 699999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchHH--------------------HHHHhhc----------------------CHHH
Q 018919 265 DGGVRRGTDVFKALALGASGIFIGRPV--------------------VYSLAAE----------------------GEKG 302 (349)
Q Consensus 265 ~GGI~~~~dv~kal~~GA~~V~ig~~~--------------------l~~~~~~----------------------G~~g 302 (349)
+|||+++.|+.|+|++||++|++||+| +|++++. |.++
T Consensus 365 ~GGI~~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~~ 444 (511)
T 3usb_A 365 DGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIEG 444 (511)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC---------------------------------
T ss_pred eCCCCCHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcEE
Confidence 999999999999999999999999997 3444331 2222
Q ss_pred -------HHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 018919 303 -------VRRVLEMLREEFELAMALSGCRSLKEITRD 332 (349)
Q Consensus 303 -------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 332 (349)
+.++++.+..+|+..|.++|+.+++||+..
T Consensus 445 ~~~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~~ 481 (511)
T 3usb_A 445 RVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLREN 481 (511)
T ss_dssp -CBCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHhC
Confidence 678899999999999999999999999864
No 30
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.91 E-value=1.9e-23 Score=197.25 Aligned_cols=241 Identities=17% Similarity=0.167 Sum_probs=174.0
Q ss_pred CCCCcceeEcCeecCcceeecc-cccccccCChhhHHHHHHHHHcCCeEEe-------------------------cCC-
Q 018919 57 SKIDMNTTVLGFKISMPIMIAP-TAMQKMAHPEGEYATARAASAAGTIMTL-------------------------SSW- 109 (349)
Q Consensus 57 ~~~d~s~~l~g~~~~~Pi~iAp-m~~~~l~~~~~~~~la~aa~~~G~~~~~-------------------------~~~- 109 (349)
+++|++++++|+++++||++|| |.+.+ . .+.+.+.+.|..+++ +..
T Consensus 3 ~~~~l~~~~~g~~l~npi~~aag~~~~~--~-----~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g 75 (311)
T 1ep3_A 3 ENNRLSVKLPGLDLKNPIIPASGCFGFG--E-----EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIG 75 (311)
T ss_dssp CCTTTCEEETTEEESSSEEECTTSSTTS--T-----TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCC
T ss_pred CCCccceEECCEECCCCcEECCCCCCCC--H-----HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccC
Confidence 6889999999999999999999 64432 1 123443333433332 111
Q ss_pred -CCCCHHHH--------HhhC-CCceEEEEeecCChhHHHHHHHHHHH-cCCCEEEEecCCCCCCchhHHhhhhcCCCCc
Q 018919 110 -STSSVEEV--------ASTG-PGIRFFQLYVYKDRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPPF 178 (349)
Q Consensus 110 -~~~~~e~i--------~~~~-~~~~~~Ql~~~~~~~~~~~~~~~~~~-~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~ 178 (349)
.+...++. .+.. ..+.++|++. .+.+...+.++++++ +|+++|+||+.||....+ +
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~-~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g------~------ 142 (311)
T 1ep3_A 76 LQNPGLEVIMTEKLPWLNENFPELPIIANVAG-SEEADYVAVCAKIGDAANVKAIELNISCPNVKHG------G------ 142 (311)
T ss_dssp CCBCCHHHHHHTHHHHHHHHCTTSCEEEEECC-SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT------T------
T ss_pred CCCcCHHHHHHHHHHHHHhcCCCCcEEEEEcC-CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc------h------
Confidence 12233332 2213 3678899986 467777888888888 999999999999852100 0
Q ss_pred CcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEec---C-HHHHHHHHHcCCCEEEEec-------CCCCCC-------
Q 018919 179 LTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVL---T-AEDARIAVQAGAAGIIVSN-------HGARQL------- 239 (349)
Q Consensus 179 ~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~---~-~~~a~~a~~~G~d~I~v~~-------~gg~~~------- 239 (349)
... ..++++ .+.++++++.+++||++|... + .+.++.+.++|+|+|+++| |+.+..
T Consensus 143 --~~~---g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~ 217 (311)
T 1ep3_A 143 --QAF---GTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANIT 217 (311)
T ss_dssp --EEG---GGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSC
T ss_pred --hhh---cCCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCC
Confidence 000 124555 788999999889999999863 3 4568999999999999987 221110
Q ss_pred --CCchh----hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHH
Q 018919 240 --DYVPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREE 313 (349)
Q Consensus 240 --~~~~~----~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~e 313 (349)
..++. .++.+.++++.+ ++|||++|||++++|+.+++++|||+|++||+++. +++ .++.+.++
T Consensus 218 ~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~-----~p~----~~~~i~~~ 286 (311)
T 1ep3_A 218 GGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA-----DPF----VCPKIIDK 286 (311)
T ss_dssp EEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHH-----CTT----HHHHHHHH
T ss_pred CcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHc-----CcH----HHHHHHHH
Confidence 12232 246677777665 79999999999999999999999999999999986 443 67788999
Q ss_pred HHHHHHHcCCCChhhhcccc
Q 018919 314 FELAMALSGCRSLKEITRDH 333 (349)
Q Consensus 314 l~~~m~~~G~~~i~~l~~~~ 333 (349)
++.+|...|+.+++|+++..
T Consensus 287 l~~~~~~~g~~~~~~~~g~~ 306 (311)
T 1ep3_A 287 LPELMDQYRIESLESLIQEV 306 (311)
T ss_dssp HHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHhChh
Confidence 99999999999999998754
No 31
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.91 E-value=1.4e-22 Score=202.81 Aligned_cols=140 Identities=23% Similarity=0.390 Sum_probs=115.6
Q ss_pred HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC------CCCchhhHHHHHHHHHHhcC-CCcEEE
Q 018919 193 DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFL 264 (349)
Q Consensus 193 ~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~~-~ipvia 264 (349)
++.++++++.+ ++||+++.+.+.+.|+.+.++|||+|+++..+|.. ...+.+++..+.+++++++. ++|||+
T Consensus 258 ~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa 337 (490)
T 4avf_A 258 IERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIA 337 (490)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEE
T ss_pred HHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEE
Confidence 68899999998 78999999999999999999999999996544431 23467889999999987743 799999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchHHH--------------------HHHhhcC------------------------H
Q 018919 265 DGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEG------------------------E 300 (349)
Q Consensus 265 ~GGI~~~~dv~kal~~GA~~V~ig~~~l--------------------~~~~~~G------------------------~ 300 (349)
+|||++++|+.|++++||++||+|++|+ |++++.| +
T Consensus 338 ~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~~~ 417 (490)
T 4avf_A 338 DGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLVP 417 (490)
T ss_dssp ESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC---------------------------------
T ss_pred eCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhcccccccccccC
Confidence 9999999999999999999999999883 4433200 1
Q ss_pred H----------HHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 018919 301 K----------GVRRVLEMLREEFELAMALSGCRSLKEITRD 332 (349)
Q Consensus 301 ~----------gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 332 (349)
+ .+.+++..+..+|+..|.++|+.+|+||+..
T Consensus 418 eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 418 EGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp ------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred CCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 2 3568999999999999999999999999865
No 32
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.91 E-value=2e-24 Score=205.09 Aligned_cols=241 Identities=20% Similarity=0.211 Sum_probs=178.7
Q ss_pred ecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCC------CHHHHHh-hC--CCceEEEEeecCChhHHH
Q 018919 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS------SVEEVAS-TG--PGIRFFQLYVYKDRNVVA 139 (349)
Q Consensus 69 ~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~------~~e~i~~-~~--~~~~~~Ql~~~~~~~~~~ 139 (349)
++++||++|||++.+ +.+++..+++.|..++++++.+. ..+.... .. ..+.++||+. ++++...
T Consensus 2 ~l~nri~~APM~~~t------~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~g-~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGYT------DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIFG-SEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTTC------SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEEC-SCHHHHH
T ss_pred ccCCCEEECCCCCCC------cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeCC-CCHHHHH
Confidence 567899999998643 46899999999998888877431 1111111 12 2679999994 6888899
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEec-----
Q 018919 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVL----- 213 (349)
Q Consensus 140 ~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~----- 213 (349)
+.+++++++ +++|+||++||....|. .++. -.+ ..++++ ++.++++++.+++||++|...
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r~----~~~G----~~l-----~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~ 140 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVVK----EGAG----GAL-----LKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKN 140 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHHH----TTCG----GGG-----GSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSC
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcCC----CCcc----cch-----hhCHHHHHHHHHHHHHhhCCCEEEEecCCCChH
Confidence 999999999 99999999999642221 1110 000 235677 899999999999999999652
Q ss_pred -CHHHHHHHHHcCCCEEEEecCCCCCC--CCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-hCCCEEEEch
Q 018919 214 -TAEDARIAVQAGAAGIIVSNHGARQL--DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGR 289 (349)
Q Consensus 214 -~~~~a~~a~~~G~d~I~v~~~gg~~~--~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~-~GA~~V~ig~ 289 (349)
..+.++.+.++|+|+|+|+ |++.. ..+++.++.+.++++ ++|||++|||++++|+.++++ .|||+|++||
T Consensus 141 ~~~~~a~~l~~~G~d~i~v~--g~~~~~~~~~~~~~~~i~~i~~----~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR 214 (318)
T 1vhn_A 141 EVEEIYRILVEEGVDEVFIH--TRTVVQSFTGRAEWKALSVLEK----RIPTFVSGDIFTPEDAKRALEESGCDGLLVAR 214 (318)
T ss_dssp CHHHHHHHHHHTTCCEEEEE--SSCTTTTTSSCCCGGGGGGSCC----SSCEEEESSCCSHHHHHHHHHHHCCSEEEESG
T ss_pred HHHHHHHHHHHhCCCEEEEc--CCCccccCCCCcCHHHHHHHHc----CCeEEEECCcCCHHHHHHHHHcCCCCEEEECH
Confidence 1378999999999999994 44432 235556666655543 799999999999999999999 7999999999
Q ss_pred HHH-----HHHhhc----CH---HHHHHHHHHHHHHHHHHHHHcCCC-Chhhhcccceec
Q 018919 290 PVV-----YSLAAE----GE---KGVRRVLEMLREEFELAMALSGCR-SLKEITRDHIVT 336 (349)
Q Consensus 290 ~~l-----~~~~~~----G~---~gv~~~l~~l~~el~~~m~~~G~~-~i~~l~~~~l~~ 336 (349)
+++ +..... |. .++.++++.+.++++..|.+.|.. .+.+++++..+.
T Consensus 215 ~~l~~P~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 274 (318)
T 1vhn_A 215 GAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAGY 274 (318)
T ss_dssp GGTTCTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHH
T ss_pred HHHhCcchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 764 333222 43 467889999999999999999975 788888876554
No 33
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.90 E-value=1.6e-22 Score=202.54 Aligned_cols=166 Identities=21% Similarity=0.311 Sum_probs=132.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEEEecCHH
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKGVLTAE 216 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~v~~~~ 216 (349)
.+.++.+.++|++.++++..++ +... ++.++++++.+ ++||+++.+.+.+
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g----------------------------~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e 284 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG----------------------------HSEGVLQRIRETRAAYPHLEIIGGNVATAE 284 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT----------------------------TSHHHHHHHHHHHHHCTTCCEEEEEECSHH
T ss_pred HHHHHHHHhccCceEEeccccc----------------------------cchHHHHHHHHHHHHCCCceEEEcccCcHH
Confidence 4566667777888877766543 1223 67899999998 8999999999999
Q ss_pred HHHHHHHcCCCEEEEecCCCCC------CCCchhhHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 217 DARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~~-~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
.|+.+.++|||+|++++.+|.. ...+.+++..+.+++++++. ++|||++|||++++|+.|++++|||+||+||
T Consensus 285 ~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iGs 364 (496)
T 4fxs_A 285 GARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGS 364 (496)
T ss_dssp HHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEecH
Confidence 9999999999999997544421 12356788999999887642 6999999999999999999999999999999
Q ss_pred HHHH--------------------HHhh-----cC-------------------H-------HHHHHHHHHHHHHHHHHH
Q 018919 290 PVVY--------------------SLAA-----EG-------------------E-------KGVRRVLEMLREEFELAM 318 (349)
Q Consensus 290 ~~l~--------------------~~~~-----~G-------------------~-------~gv~~~l~~l~~el~~~m 318 (349)
+|+. ++++ +| . ..+.+++..+..+|+..|
T Consensus 365 ~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~~l~~~~ 444 (496)
T 4fxs_A 365 MFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCM 444 (496)
T ss_dssp TTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCCSBCEEEEECCBCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccCCccEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 8853 2211 00 0 136789999999999999
Q ss_pred HHcCCCChhhhccc
Q 018919 319 ALSGCRSLKEITRD 332 (349)
Q Consensus 319 ~~~G~~~i~~l~~~ 332 (349)
.++|+.+|+||+..
T Consensus 445 ~~~g~~~i~~l~~~ 458 (496)
T 4fxs_A 445 GLTGSATVEDLRTK 458 (496)
T ss_dssp HHHTCSBHHHHHHH
T ss_pred HhcCcCcHHHHHhC
Confidence 99999999999854
No 34
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.90 E-value=4.8e-22 Score=195.41 Aligned_cols=253 Identities=19% Similarity=0.180 Sum_probs=171.2
Q ss_pred ccccccccCCCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEec-CCCC-------------
Q 018919 46 ILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SWST------------- 111 (349)
Q Consensus 46 ~~l~p~~l~~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~-~~~~------------- 111 (349)
+.+.|... ..+++.++++++|+++.+||++|+... ..+ ...+...+.|..+++. +.+.
T Consensus 68 ~~~~~~~~-~~~~~~l~~~i~Gl~~~NPvglAAG~d-----k~~--~~~~~l~~~GfG~v~~gtvT~~pq~GNp~PR~~r 139 (443)
T 1tv5_A 68 YNILPYDT-SNDSIYACTNIKHLDFINPFGVAAGFD-----KNG--VCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFR 139 (443)
T ss_dssp TTCSCCCC-SCCCGGGCEEETTEEESSSEEECTTTT-----TTC--SSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEE
T ss_pred ccCCcccc-cCCCccCCeEECCEEeCCCcEECCccc-----Ccc--HHHHHHHhcCCCEEEEeeeecCCCCCCCCccEEe
Confidence 34555422 234567799999999999999998431 111 2233467788666542 1111
Q ss_pred ---------------CCHHH----HHh---h-------CCCceEEEEeecCC-hhHHHHHHHHHHHc--CCCEEEEecCC
Q 018919 112 ---------------SSVEE----VAS---T-------GPGIRFFQLYVYKD-RNVVAQLVRRAERA--GFKAIALTVDT 159 (349)
Q Consensus 112 ---------------~~~e~----i~~---~-------~~~~~~~Ql~~~~~-~~~~~~~~~~~~~~--G~~~i~i~~d~ 159 (349)
..++. +.+ . .+.+..+|+..+++ ++...+.++.++.. ++++|+||+.|
T Consensus 140 l~e~~~iiN~~GfnN~G~~~~~~~l~~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNisc 219 (443)
T 1tv5_A 140 DVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSS 219 (443)
T ss_dssp ETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCC
T ss_pred ccccceeeeccccCChhHHHHHHHHHHHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccC
Confidence 01111 111 1 02457789987542 22344444444433 69999999999
Q ss_pred CCCC-chhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHh-----------------------------------
Q 018919 160 PRLG-RREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTI----------------------------------- 202 (349)
Q Consensus 160 p~~g-~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~----------------------------------- 202 (349)
|... .| ++ .+++. .+.++.+++.
T Consensus 220 Pnt~Glr--~l------------------q~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~ 279 (443)
T 1tv5_A 220 PNTPGLR--DN------------------QEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSH 279 (443)
T ss_dssp TTSTTGG--GG------------------GSHHHHHHHHHHHHHHHHHHC------------------------------
T ss_pred CCCcccc--cc------------------cCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchh
Confidence 9641 11 11 12233 3344444432
Q ss_pred ---------------cCCc-EEEEEecC--H----HHHHHHHHcCCCEEEEecCCCCCCC--------C---chh----h
Q 018919 203 ---------------TKLP-ILVKGVLT--A----EDARIAVQAGAAGIIVSNHGARQLD--------Y---VPA----T 245 (349)
Q Consensus 203 ---------------~~~p-v~vK~v~~--~----~~a~~a~~~G~d~I~v~~~gg~~~~--------~---~~~----~ 245 (349)
.++| |++|+..+ . +.|+.+.++|+|+|+++|+...+.+ + |++ +
T Consensus 280 ~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~s 359 (443)
T 1tv5_A 280 MMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDIS 359 (443)
T ss_dssp --------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHH
T ss_pred hhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHH
Confidence 3689 99999754 2 3388999999999999997653221 1 222 4
Q ss_pred HHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 018919 246 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRS 325 (349)
Q Consensus 246 ~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~ 325 (349)
++.+.++++.+++++|||++|||++++|+.++|++|||+||+||++++. |+ .+++.++++++.+|...|+++
T Consensus 360 l~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~----gP----~l~~~i~~~l~~~l~~~G~~s 431 (443)
T 1tv5_A 360 TKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GM----KSAVQIKRELNHLLYQRGYYN 431 (443)
T ss_dssp HHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHH----GG----GHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----Ch----HHHHHHHHHHHHHHHHhCCCC
Confidence 6788999988866899999999999999999999999999999999973 44 367888999999999999999
Q ss_pred hhhhcccce
Q 018919 326 LKEITRDHI 334 (349)
Q Consensus 326 i~~l~~~~l 334 (349)
++|+++...
T Consensus 432 i~e~~G~~~ 440 (443)
T 1tv5_A 432 LKEAIGRKH 440 (443)
T ss_dssp SGGGTTTTC
T ss_pred HHHHhhhhc
Confidence 999998753
No 35
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.90 E-value=1.8e-22 Score=202.72 Aligned_cols=139 Identities=20% Similarity=0.286 Sum_probs=118.1
Q ss_pred HHHHHHHHHhc-C-CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCC-----CC-CCchhhHHHHHHHHHHhcC------
Q 018919 193 DEDVKWLQTIT-K-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR-----QL-DYVPATIMALEEVVKATQG------ 258 (349)
Q Consensus 193 ~~~i~~i~~~~-~-~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~-----~~-~~~~~~~~~l~~i~~~~~~------ 258 (349)
++.++++++.+ + +|++++.+.+.++++.+.++|+|+|+++.+||. .. .+|.|++.++.++.++++.
T Consensus 271 ~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~ 350 (503)
T 1me8_A 271 KITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETG 350 (503)
T ss_dssp HHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcC
Confidence 77899999987 5 899999999999999999999999999655542 22 3477889999999876532
Q ss_pred -CCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH--------------------HHHhhcCH-----------------
Q 018919 259 -RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEGE----------------- 300 (349)
Q Consensus 259 -~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l--------------------~~~~~~G~----------------- 300 (349)
++|||++|||+++.|++|||++||++|++|++|+ |++++.|+
T Consensus 351 ~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~ 430 (503)
T 1me8_A 351 IYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFE 430 (503)
T ss_dssp EECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC--------------
T ss_pred CCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccccccceecc
Confidence 5999999999999999999999999999999995 33332211
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHcCCCChhhhcc
Q 018919 301 ----------KGVRRVLEMLREEFELAMALSGCRSLKEITR 331 (349)
Q Consensus 301 ----------~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~ 331 (349)
.++.++++.|..||+..|.++|+.+++||++
T Consensus 431 eg~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~ 471 (503)
T 1me8_A 431 EGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQS 471 (503)
T ss_dssp CCCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHH
T ss_pred cceeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHh
Confidence 2578999999999999999999999999986
No 36
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.89 E-value=8.6e-22 Score=188.28 Aligned_cols=209 Identities=18% Similarity=0.203 Sum_probs=150.7
Q ss_pred CCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEec-CCCCC------------------------
Q 018919 58 KIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SWSTS------------------------ 112 (349)
Q Consensus 58 ~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~-~~~~~------------------------ 112 (349)
.+|++++++|+++++||++|++ . ++++ .+++++++.|+.+++. +.+..
T Consensus 42 ~~~l~~~i~g~~l~npi~~aag-~----~~~~--~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g 114 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAAG-L----DKDG--ECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMG 114 (336)
T ss_dssp CCCCCEEETTEEESSSEEECTT-S----STTC--CCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCC
T ss_pred CCCCCeEECCEEcCCCcEeCcc-c----CCcH--HHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCC
Confidence 4899999999999999999963 2 3333 3788899999887643 21110
Q ss_pred ----CHHH----HHhhCC-CceEEEEeecCC------hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCC
Q 018919 113 ----SVEE----VASTGP-GIRFFQLYVYKD------RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP 177 (349)
Q Consensus 113 ----~~e~----i~~~~~-~~~~~Ql~~~~~------~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~ 177 (349)
..+. +.+... .+.++|+..+.+ .+...+.++++.+ |+|++++|+.||.... .+
T Consensus 115 ~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g-~~---------- 182 (336)
T 1f76_A 115 FNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTPG-LR---------- 182 (336)
T ss_dssp CCBCCHHHHHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSSTT-GG----------
T ss_pred CCCcCHHHHHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCCC-cc----------
Confidence 1122 222222 467889876431 3444555556554 8999999999986310 00
Q ss_pred cCcccccCCCCCCch-HHHHHHHHHhc---------CCcEEEEEecC------HHHHHHHHHcCCCEEEEecCC-CCC--
Q 018919 178 FLTLKNFQGLDLGKM-DEDVKWLQTIT---------KLPILVKGVLT------AEDARIAVQAGAAGIIVSNHG-ARQ-- 238 (349)
Q Consensus 178 ~~~~~~~~~~~~~~~-~~~i~~i~~~~---------~~pv~vK~v~~------~~~a~~a~~~G~d~I~v~~~g-g~~-- 238 (349)
. ..++++ ++.++++|+.+ ++||++|.... .+.|+.+.++|+|+|+++|++ +++
T Consensus 183 -----~---~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~ 254 (336)
T 1f76_A 183 -----T---LQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLV 254 (336)
T ss_dssp -----G---GGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTS
T ss_pred -----c---ccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCccccccc
Confidence 0 124556 88999999988 89999998743 344789999999999999874 222
Q ss_pred -------CC---Cch----hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 239 -------LD---YVP----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 239 -------~~---~~~----~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.. .|+ .+++.+.++++.+++++|||++|||++++|+.++|++|||+|++||++++
T Consensus 255 ~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 255 QGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp TTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred ccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 01 122 24578888888886689999999999999999999999999999999997
No 37
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.88 E-value=5e-21 Score=192.03 Aligned_cols=144 Identities=24% Similarity=0.413 Sum_probs=119.1
Q ss_pred Cch-HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC-----C-CCchhhHHHHHHHHHHhcC-CC
Q 018919 190 GKM-DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ-----L-DYVPATIMALEEVVKATQG-RI 260 (349)
Q Consensus 190 ~~~-~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~-----~-~~~~~~~~~l~~i~~~~~~-~i 260 (349)
+.. |+.++++++.+ ++||+++.+.+.++++.+.++|+|+|+++++||.. . ..+.++...+.++.+.++. ++
T Consensus 262 ~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~i 341 (494)
T 1vrd_A 262 SRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDV 341 (494)
T ss_dssp SHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCC
Confidence 444 88999999998 79999999999999999999999999998887631 1 2356778888888877543 79
Q ss_pred cEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH--------------------HHhh-----cC--------------HH
Q 018919 261 PVFLDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAA-----EG--------------EK 301 (349)
Q Consensus 261 pvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~--------------------~~~~-----~G--------------~~ 301 (349)
|||++|||+++.|+.|+|++|||+|++||+|+. ++++ .| ++
T Consensus 342 pvia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~ 421 (494)
T 1vrd_A 342 PIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPE 421 (494)
T ss_dssp CEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC------------------------
T ss_pred CEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCC
Confidence 999999999999999999999999999999962 2211 00 23
Q ss_pred H----------HHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 018919 302 G----------VRRVLEMLREEFELAMALSGCRSLKEITRDH 333 (349)
Q Consensus 302 g----------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 333 (349)
| +.++++.+..+|+..|.++|+.++++|++..
T Consensus 422 g~~~~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~ 463 (494)
T 1vrd_A 422 GIEGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQEKA 463 (494)
T ss_dssp -CBCCEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHC
T ss_pred cceEccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHHHHHhhC
Confidence 3 6799999999999999999999999998653
No 38
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.88 E-value=1.1e-20 Score=181.50 Aligned_cols=243 Identities=18% Similarity=0.181 Sum_probs=173.8
Q ss_pred cCcceeecccccccccCChhhHHHHHHHHHcCC-eEEecCCCCC------CHHHHHhhCC--CceEEEEeecCChhHHHH
Q 018919 70 ISMPIMIAPTAMQKMAHPEGEYATARAASAAGT-IMTLSSWSTS------SVEEVASTGP--GIRFFQLYVYKDRNVVAQ 140 (349)
Q Consensus 70 ~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~-~~~~~~~~~~------~~e~i~~~~~--~~~~~Ql~~~~~~~~~~~ 140 (349)
+++||++|||.+.+ +..++..+++.|. .++++++.+. ..+++.+..+ .+.++||+. .+++...+
T Consensus 2 l~nriv~APM~g~t------d~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g-~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVDRT------DRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAG-SDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTTTS------SHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEEC-SCHHHHHH
T ss_pred CCCCEEECCCCCCC------HHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeCC-CCHHHHHH
Confidence 57899999998643 6678888888886 5667776431 1123333333 678999986 68888899
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecC-----
Q 018919 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLT----- 214 (349)
Q Consensus 141 ~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~----- 214 (349)
.+++++++|++.|+||++||..-.|. .++. -.+ ..++++ .+.++.+++.+++||++|....
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~~----d~~G----~~l-----~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~ 141 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQE----GGYG----ACL-----LLDLARVREILKAMGEAVRVPVTVKMRLGLEGKE 141 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHHH----TTCG----GGG-----GGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCC
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCcC----CCcc----hhH-----HhCHHHHHHHHHHHHHHhCCceEEEEecCcCccc
Confidence 99999999999999999999642221 1111 000 135666 7889999998999999998631
Q ss_pred -----HHHHHHHHHcCCCEEEEecCCCCCCCC-------chhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCC
Q 018919 215 -----AEDARIAVQAGAAGIIVSNHGARQLDY-------VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 282 (349)
Q Consensus 215 -----~~~a~~a~~~G~d~I~v~~~gg~~~~~-------~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA 282 (349)
.+.++.+.++|+|+|++++....+... .+..++.+.++++.++ ++|||++|||++++|+.++++ ||
T Consensus 142 ~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~-~iPVianGgI~s~eda~~~l~-Ga 219 (350)
T 3b0p_A 142 TYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP-QLTFVTNGGIRSLEEALFHLK-RV 219 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHHT-TS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC-CCeEEEECCcCCHHHHHHHHh-CC
Confidence 356789999999999996421101011 1236888888888763 699999999999999999998 99
Q ss_pred CEEEEchHHHHHHh--------hcC---HHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccceec
Q 018919 283 SGIFIGRPVVYSLA--------AEG---EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 336 (349)
Q Consensus 283 ~~V~ig~~~l~~~~--------~~G---~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~ 336 (349)
|+||+||+++..-. ..| .....++++.+.+.++..+.. |. .+.+++++.++.
T Consensus 220 D~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~kh~~~~ 282 (350)
T 3b0p_A 220 DGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLK-GT-PPWAVLRHMLNL 282 (350)
T ss_dssp SEEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHHH-TC-CHHHHHTTSTTT
T ss_pred CEEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHc-Cc-cHHHHHHHHHHH
Confidence 99999998864210 112 113456677788888877774 65 688888887654
No 39
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.87 E-value=9e-21 Score=182.50 Aligned_cols=245 Identities=16% Similarity=0.093 Sum_probs=160.9
Q ss_pred CCCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEe-cCCCC----------------------
Q 018919 55 DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWST---------------------- 111 (349)
Q Consensus 55 ~~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~-~~~~~---------------------- 111 (349)
...+.|++|+++|++|++||++|+-.+ ++ +....+++.+.|..++. ++.+.
T Consensus 31 g~~~~~L~v~~~Gl~f~NPvglAaG~~----~~--~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~ 104 (354)
T 3tjx_A 31 GRGSMSLQVNLLNNTFANPFMNAAGVM----CT--TTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSM 104 (354)
T ss_dssp --CCCCCCEEETTEEESSSEEECTTSS----CS--SHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECC
T ss_pred CCCCCceeEEECCEEcCCCcEEccCCC----CC--CHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEccccccccc
Confidence 356889999999999999999997212 23 45677788888877653 22211
Q ss_pred ----CCHH----HHHhhCC---CceEEEEeecCChhHHHHHHHHHHH---cCCCEEEEecCCCCCCchhHHhhhhcCCCC
Q 018919 112 ----SSVE----EVASTGP---GIRFFQLYVYKDRNVVAQLVRRAER---AGFKAIALTVDTPRLGRREADIKNRFTLPP 177 (349)
Q Consensus 112 ----~~~e----~i~~~~~---~~~~~Ql~~~~~~~~~~~~~~~~~~---~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~ 177 (349)
..++ ++.+... .+.++++.. .+.+...+..+++.+ .++++++||+.||.. |.
T Consensus 105 G~~n~G~~~~~~~~~~~~~~~~~pvivsi~g-~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~-------------~g 170 (354)
T 3tjx_A 105 GLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG-LSMRENVEMCKRLAAVATEKGVILELNLSCPNV-------------PG 170 (354)
T ss_dssp CCCBCCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECC-------------------
T ss_pred ccCCHHHHHHHHHHHHhhccCCceEEEEEec-CChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCC-------------cc
Confidence 1122 2222221 457788866 455555555555543 489999999999853 10
Q ss_pred cCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecCH------HHHHHHHHcC-CCEEEEecCCC-------------
Q 018919 178 FLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLTA------EDARIAVQAG-AAGIIVSNHGA------------- 236 (349)
Q Consensus 178 ~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~------~~a~~a~~~G-~d~I~v~~~gg------------- 236 (349)
.+.+ ..+++. .+.++++++.++.|+.+|..... ..+..+.+.+ ++.+...|+-.
T Consensus 171 ---~~~l--~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~ 245 (354)
T 3tjx_A 171 ---KPQV--AYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVV 245 (354)
T ss_dssp ------C--TTSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEES
T ss_pred ---hhhh--ccCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhheeccccccccccccccccc
Confidence 0110 124444 56789999999999999997532 1233344443 44444333210
Q ss_pred ------CCCCCchhhH----HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHH
Q 018919 237 ------RQLDYVPATI----MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRV 306 (349)
Q Consensus 237 ------~~~~~~~~~~----~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~ 306 (349)
.+..+|++.+ +.+.++++.+ .++|||++|||+|++|++++|.+|||+|||||+++|. |+. +
T Consensus 246 ~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~-~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~----GP~----~ 316 (354)
T 3tjx_A 246 IKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEE----GPS----I 316 (354)
T ss_dssp CSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHH----CTT----H
T ss_pred ccCcccccccCchhhHHHHHHHHHHHHHhc-CCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhc----Cch----H
Confidence 0112344433 4455555554 3789999999999999999999999999999999873 663 6
Q ss_pred HHHHHHHHHHHHHHcCCCChhhhcccc
Q 018919 307 LEMLREEFELAMALSGCRSLKEITRDH 333 (349)
Q Consensus 307 l~~l~~el~~~m~~~G~~~i~~l~~~~ 333 (349)
++.+.+||+.+|+..|+++++|+++..
T Consensus 317 ~~~I~~~L~~~L~~~G~~si~e~~G~~ 343 (354)
T 3tjx_A 317 FERLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 788999999999999999999999875
No 40
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.87 E-value=1.2e-20 Score=190.10 Aligned_cols=142 Identities=23% Similarity=0.325 Sum_probs=112.4
Q ss_pred CCch-HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC------CCCc---hhhHHHHHHHHHHhc
Q 018919 189 LGKM-DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYV---PATIMALEEVVKATQ 257 (349)
Q Consensus 189 ~~~~-~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~------~~~~---~~~~~~l~~i~~~~~ 257 (349)
++.+ ++.++++++.+ ++||++|.+.+.++|+.+.++|+|+|++++++|.. .+.| ...+..+.++++.+
T Consensus 279 ~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~- 357 (514)
T 1jcn_A 279 NSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF- 357 (514)
T ss_dssp CSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG-
T ss_pred cchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC-
Confidence 3455 78899999998 89999999999999999999999999997664421 1134 23455566666555
Q ss_pred CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH--------------------HHhh--------------------
Q 018919 258 GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAA-------------------- 297 (349)
Q Consensus 258 ~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~--------------------~~~~-------------------- 297 (349)
++|||++|||+++.|+.|++++|||+|++||+|+. +++.
T Consensus 358 -~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~ 436 (514)
T 1jcn_A 358 -GVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDK 436 (514)
T ss_dssp -TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC-------------------------------------
T ss_pred -CCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhcccccc
Confidence 79999999999999999999999999999998853 2210
Q ss_pred -cCHHHH----------HHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 018919 298 -EGEKGV----------RRVLEMLREEFELAMALSGCRSLKEITRD 332 (349)
Q Consensus 298 -~G~~gv----------~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 332 (349)
.+++|+ .++++.|..||+..|.++|+++++||++.
T Consensus 437 ~~~~~gv~~~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 437 VKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp -------------CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred ceecccceecCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHhh
Confidence 023454 89999999999999999999999999975
No 41
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.87 E-value=1.1e-20 Score=189.33 Aligned_cols=146 Identities=16% Similarity=0.226 Sum_probs=120.1
Q ss_pred Cch-HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC------CCCchhhHHHHHHHHHHhc-CCC
Q 018919 190 GKM-DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRI 260 (349)
Q Consensus 190 ~~~-~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~-~~i 260 (349)
... |+.++++++.+ ++|++.+++.+.+.++.+.++|+|+|.+++.+|.. ...+.++++.+.++...++ .++
T Consensus 258 ~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~i 337 (491)
T 1zfj_A 258 SAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGK 337 (491)
T ss_dssp CHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTC
T ss_pred chhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCC
Confidence 344 78899999999 89999999999999999999999999998665532 1235667888888877543 379
Q ss_pred cEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH--------------------HHhhcC---------------------
Q 018919 261 PVFLDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAAEG--------------------- 299 (349)
Q Consensus 261 pvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~--------------------~~~~~G--------------------- 299 (349)
|||++|||+++.|+.|++++||++|++|++|+. ++++.+
T Consensus 338 pvia~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~ 417 (491)
T 1zfj_A 338 TIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKL 417 (491)
T ss_dssp EEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCC
T ss_pred CEEeeCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhcccccccccccccccccc
Confidence 999999999999999999999999999999972 111100
Q ss_pred -HHH----------HHHHHHHHHHHHHHHHHHcCCCChhhhccccee
Q 018919 300 -EKG----------VRRVLEMLREEFELAMALSGCRSLKEITRDHIV 335 (349)
Q Consensus 300 -~~g----------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~ 335 (349)
.+| +.++++.+..||+..|.++|+.++.+|+.....
T Consensus 418 ~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~~~ 464 (491)
T 1zfj_A 418 VPEGIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHENAQF 464 (491)
T ss_dssp CCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHCCE
T ss_pred CcCcceEecCcCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhcCcE
Confidence 223 889999999999999999999999999865443
No 42
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.84 E-value=7.3e-20 Score=183.19 Aligned_cols=139 Identities=22% Similarity=0.303 Sum_probs=110.3
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC-------CCCchhhHHHHHHHHHHhc-CCCcEEE
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ-------LDYVPATIMALEEVVKATQ-GRIPVFL 264 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~-------~~~~~~~~~~l~~i~~~~~-~~ipvia 264 (349)
++.++++++.+++|+++|++.++++++.+. |+|+|.+ +.|+.. ...|.++...+.++.+... .++|||+
T Consensus 257 L~~I~~l~~~~~vpvi~k~v~~~~~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia 333 (486)
T 2cu0_A 257 IKSMKEMRQKVDADFIVGNIANPKAVDDLT--FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIA 333 (486)
T ss_dssp HHHHHHHHHTCCSEEEEEEECCHHHHTTCT--TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhCCccccCCcCCHHHHHHhh--CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEe
Confidence 677999999999999999999999998888 9999999 444322 2234555555555544332 1799999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchHHHH--------------------HHhhcC----------------------HHH
Q 018919 265 DGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAAEG----------------------EKG 302 (349)
Q Consensus 265 ~GGI~~~~dv~kal~~GA~~V~ig~~~l~--------------------~~~~~G----------------------~~g 302 (349)
+|||+++.|++|||++|||+|++|++|+. ++++.| ++|
T Consensus 334 ~GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g 413 (486)
T 2cu0_A 334 DGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEG 413 (486)
T ss_dssp ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCB
T ss_pred cCCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccccccccccc
Confidence 99999999999999999999999999983 221111 233
Q ss_pred ----------HHHHHHHHHHHHHHHHHHcCCCChhhhcccce
Q 018919 303 ----------VRRVLEMLREEFELAMALSGCRSLKEITRDHI 334 (349)
Q Consensus 303 ----------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l 334 (349)
+.++++.+..+|+..|.++|+.++.+|+....
T Consensus 414 ~~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~~~ 455 (486)
T 2cu0_A 414 VEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGE 455 (486)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCC
T ss_pred eEEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhhCC
Confidence 88999999999999999999999999985533
No 43
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.81 E-value=5e-18 Score=161.64 Aligned_cols=195 Identities=19% Similarity=0.233 Sum_probs=143.7
Q ss_pred eeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHH-------HhhCCCceEEEEeecC--
Q 018919 63 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYK-- 133 (349)
Q Consensus 63 ~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i-------~~~~~~~~~~Ql~~~~-- 133 (349)
+++++. +.||++|||++.+ +..++.++.++|..+++...+..+.+++ ++....++.++++...
T Consensus 9 ~~~l~~--~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~ 80 (328)
T 2gjl_A 9 TETFGV--EHPIMQGGMQWVG------RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQ 80 (328)
T ss_dssp HHHHTC--SSSEEECCCTTTC------SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS
T ss_pred HHHhCC--CCCEEECCCCCCC------cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 345554 5799999997643 4579999999998777754332234443 2222346778888741
Q ss_pred -ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe
Q 018919 134 -DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV 212 (349)
Q Consensus 134 -~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v 212 (349)
+++ ..+.++.+.+.|++.+.++.++| ++.++++++. ++|++.+ +
T Consensus 81 ~~~~-~~~~~~~~~~~g~d~V~~~~g~p--------------------------------~~~~~~l~~~-gi~vi~~-v 125 (328)
T 2gjl_A 81 KPVP-YAEYRAAIIEAGIRVVETAGNDP--------------------------------GEHIAEFRRH-GVKVIHK-C 125 (328)
T ss_dssp SCCC-HHHHHHHHHHTTCCEEEEEESCC--------------------------------HHHHHHHHHT-TCEEEEE-E
T ss_pred cCcc-HHHHHHHHHhcCCCEEEEcCCCc--------------------------------HHHHHHHHHc-CCCEEee-C
Confidence 222 45678888999999999887653 3567777765 8898864 7
Q ss_pred cCHHHHHHHHHcCCCEEEEecC--CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchH
Q 018919 213 LTAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 290 (349)
Q Consensus 213 ~~~~~a~~a~~~G~d~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~ 290 (349)
.+.++++.+.+.|+|+|++++. ||+......++++.++++++.+ ++||+++|||++++|+.+++++|||+|++||+
T Consensus 126 ~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~ 203 (328)
T 2gjl_A 126 TAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFADGRGLVAALALGADAINMGTR 203 (328)
T ss_dssp SSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 8899999999999999999763 4332111346788898888766 79999999999999999999999999999999
Q ss_pred HHHHHhhcCHHH
Q 018919 291 VVYSLAAEGEKG 302 (349)
Q Consensus 291 ~l~~~~~~G~~g 302 (349)
|+....+.+.+.
T Consensus 204 ~~~~~e~~~~~~ 215 (328)
T 2gjl_A 204 FLATRECPIHPA 215 (328)
T ss_dssp HHTSSSSCSCHH
T ss_pred HHcCccccccHH
Confidence 987654444433
No 44
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.80 E-value=8.2e-18 Score=160.05 Aligned_cols=186 Identities=20% Similarity=0.274 Sum_probs=139.9
Q ss_pred ecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH----hh---CCCceEEEEeecCChhHHHHH
Q 018919 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA----ST---GPGIRFFQLYVYKDRNVVAQL 141 (349)
Q Consensus 69 ~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~----~~---~~~~~~~Ql~~~~~~~~~~~~ 141 (349)
.++.||++|||++.+ +..++.++.++|..+++... ..+.+++. +. ...++.++++.. +++ ..+.
T Consensus 24 ~~~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~~-~~~~ 94 (326)
T 3bo9_A 24 EIEHPILMGGMAWAG------TPTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIILV-SPW-ADDL 94 (326)
T ss_dssp TCSSSEEECCCTTTS------CHHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEETT-STT-HHHH
T ss_pred CCCCCEEECCCCCCC------CHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEecc-CCC-HHHH
Confidence 456899999998643 45799999999987777532 23444432 21 224677887752 332 3567
Q ss_pred HHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCHHHHHHH
Q 018919 142 VRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTAEDARIA 221 (349)
Q Consensus 142 ~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~~~a~~a 221 (349)
++.+.+.|++.+.++.++| .+.++++++ .++|+++ .+.+.++++.+
T Consensus 95 ~~~~~~~g~d~V~l~~g~p--------------------------------~~~~~~l~~-~g~~v~~-~v~s~~~a~~a 140 (326)
T 3bo9_A 95 VKVCIEEKVPVVTFGAGNP--------------------------------TKYIRELKE-NGTKVIP-VVASDSLARMV 140 (326)
T ss_dssp HHHHHHTTCSEEEEESSCC--------------------------------HHHHHHHHH-TTCEEEE-EESSHHHHHHH
T ss_pred HHHHHHCCCCEEEECCCCc--------------------------------HHHHHHHHH-cCCcEEE-EcCCHHHHHHH
Confidence 7888899999999877653 245666765 4888876 46889999999
Q ss_pred HHcCCCEEEEec--CCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcC
Q 018919 222 VQAGAAGIIVSN--HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG 299 (349)
Q Consensus 222 ~~~G~d~I~v~~--~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G 299 (349)
.++|+|+|++++ +||+. +..++++.++++++.+ ++|||++|||++++|+.+++++||++|++||+|+....+.+
T Consensus 141 ~~~GaD~i~v~g~~~GG~~--G~~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~~~ 216 (326)
T 3bo9_A 141 ERAGADAVIAEGMESGGHI--GEVTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDV 216 (326)
T ss_dssp HHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSCCS
T ss_pred HHcCCCEEEEECCCCCccC--CCccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccccc
Confidence 999999999987 45532 2356889999998877 79999999999999999999999999999999987554433
Q ss_pred HH
Q 018919 300 EK 301 (349)
Q Consensus 300 ~~ 301 (349)
.+
T Consensus 217 ~~ 218 (326)
T 3bo9_A 217 HP 218 (326)
T ss_dssp CH
T ss_pred cH
Confidence 33
No 45
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.79 E-value=6.1e-18 Score=161.33 Aligned_cols=183 Identities=21% Similarity=0.251 Sum_probs=138.2
Q ss_pred eEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHH-------HhhCCCceEEEEeecCChh
Q 018919 64 TVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYKDRN 136 (349)
Q Consensus 64 ~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i-------~~~~~~~~~~Ql~~~~~~~ 136 (349)
+++| ++.||+.|||++.+ +..++.++.++|...++.... .+.+++ ++....++.+|++.. +++
T Consensus 7 ~~l~--~~~Pii~apM~g~s------~~~la~av~~aG~lG~i~~~~-~~~~~~~~~i~~i~~~~~~p~gvnl~~~-~~~ 76 (332)
T 2z6i_A 7 ELLK--IDYPIFQGGMAWVA------DGDLAGAVSKAGGLGIIGGGN-APKEVVKANIDKIKSLTDKPFGVNIMLL-SPF 76 (332)
T ss_dssp HHHT--CSSSEEECCCTTTC------CHHHHHHHHHHTSBEEEECTT-CCHHHHHHHHHHHHHHCCSCEEEEECTT-STT
T ss_pred HHhC--CCCCEEeCCCCCCC------cHHHHHHHHhCCCcEEeCCCC-CCHHHHHHHHHHHHHhcCCCEEEEecCC-CCC
Confidence 3455 56799999998532 347899999999866664322 244432 222235788998763 333
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCHH
Q 018919 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTAE 216 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~~ 216 (349)
..+.++.+.+.|++++.++.++|. +.++++++ .++|+++| +.+.+
T Consensus 77 -~~~~~~~a~~~g~d~V~~~~g~p~--------------------------------~~i~~l~~-~g~~v~~~-v~~~~ 121 (332)
T 2z6i_A 77 -VEDIVDLVIEEGVKVVTTGAGNPS--------------------------------KYMERFHE-AGIIVIPV-VPSVA 121 (332)
T ss_dssp -HHHHHHHHHHTTCSEEEECSSCGG--------------------------------GTHHHHHH-TTCEEEEE-ESSHH
T ss_pred -HHHHHHHHHHCCCCEEEECCCChH--------------------------------HHHHHHHH-cCCeEEEE-eCCHH
Confidence 456788889999999998876541 34666665 48999987 57899
Q ss_pred HHHHHHHcCCCEEEEecC--CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHH
Q 018919 217 DARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 294 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~ 294 (349)
+++.+.+.|+|+|++++. ||+. +..++++.++++++.+ ++|||++|||++++++.+++++|||+|++||+|+..
T Consensus 122 ~a~~~~~~GaD~i~v~g~~~GG~~--g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~ 197 (332)
T 2z6i_A 122 LAKRMEKIGADAVIAEGMEAGGHI--GKLTTMTLVRQVATAI--SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVA 197 (332)
T ss_dssp HHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTB
T ss_pred HHHHHHHcCCCEEEEECCCCCCCC--CCccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcC
Confidence 999999999999999764 4431 2356788899998887 799999999999999999999999999999999865
Q ss_pred H
Q 018919 295 L 295 (349)
Q Consensus 295 ~ 295 (349)
.
T Consensus 198 ~ 198 (332)
T 2z6i_A 198 K 198 (332)
T ss_dssp T
T ss_pred c
Confidence 4
No 46
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.75 E-value=1.6e-16 Score=153.57 Aligned_cols=183 Identities=22% Similarity=0.258 Sum_probs=132.3
Q ss_pred CcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHH-------HhhCCCceEEEEeecCCh----h---
Q 018919 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYKDR----N--- 136 (349)
Q Consensus 71 ~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i-------~~~~~~~~~~Ql~~~~~~----~--- 136 (349)
..||+.|||++ ++. +..++.++.++|..++++.. ..+.+++ .+..++++.+|++..... +
T Consensus 10 ~~Pii~apMag-gvs----~~~la~av~~aGglG~i~~~-~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~ 83 (369)
T 3bw2_A 10 PLPIVQAPMAG-GVS----VPQLAAAVCEAGGLGFLAAG-YKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVE 83 (369)
T ss_dssp SSSEEECCCTT-TTS----CHHHHHHHHHTTSBEEEECT-TSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHH
T ss_pred cCCEEeCCCCC-CCC----cHHHHHHHHHCCCEEEcCCC-CCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHH
Confidence 78999999985 122 45899999999998888643 2344443 222335678888764331 0
Q ss_pred --------------------------HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCC
Q 018919 137 --------------------------VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (349)
Q Consensus 137 --------------------------~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~ 190 (349)
...+.++.+.+.|++.+.++.++|.
T Consensus 84 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~----------------------------- 134 (369)
T 3bw2_A 84 VYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPD----------------------------- 134 (369)
T ss_dssp HHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCC-----------------------------
T ss_pred HHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCc-----------------------------
Confidence 1244556666677777776665431
Q ss_pred chHHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecC--CCC---CCCCc------hhhHHHHHHHHHHhcCC
Q 018919 191 KMDEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNH--GAR---QLDYV------PATIMALEEVVKATQGR 259 (349)
Q Consensus 191 ~~~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~--gg~---~~~~~------~~~~~~l~~i~~~~~~~ 259 (349)
++.++++++ .++|++++ +.+.++++.+.++|+|+|++++. ||+ ..... ...++.++++++.+ +
T Consensus 135 --~~~i~~~~~-~g~~v~~~-v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~ 208 (369)
T 3bw2_A 135 --REVIARLRR-AGTLTLVT-ATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--D 208 (369)
T ss_dssp --HHHHHHHHH-TTCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--S
T ss_pred --HHHHHHHHH-CCCeEEEE-CCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc--C
Confidence 466788876 48888764 67899999999999999999763 332 11111 23488888888876 7
Q ss_pred CcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHH
Q 018919 260 IPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 294 (349)
Q Consensus 260 ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~ 294 (349)
+|||++|||++++++.+++++|||+|++||+|+..
T Consensus 209 iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~ 243 (369)
T 3bw2_A 209 IPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLAT 243 (369)
T ss_dssp SCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred ceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCC
Confidence 99999999999999999999999999999999864
No 47
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.69 E-value=2.5e-15 Score=143.59 Aligned_cols=221 Identities=18% Similarity=0.167 Sum_probs=144.1
Q ss_pred ceeEcCeecCcceeeccccccccc----CC-hhhHH-HHHHHHHcCCeEEecCCCCC--------------C------HH
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKMA----HP-EGEYA-TARAASAAGTIMTLSSWSTS--------------S------VE 115 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l~----~~-~~~~~-la~aa~~~G~~~~~~~~~~~--------------~------~e 115 (349)
..+|.+.+++++|++|||+...-. .| +-... +.+.| +.|+.++++++... + .+
T Consensus 8 p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA-~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~ 86 (338)
T 1z41_A 8 PITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRA-IGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFA 86 (338)
T ss_dssp CEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHH-HTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHH
T ss_pred CeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHH-cCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHH
Confidence 477889999999999999865421 12 11122 33333 56777777654211 1 11
Q ss_pred HHHh---hCCCceEEEEeec----------------------CCh------------hHHHHHHHHHHHcCCCEEEEecC
Q 018919 116 EVAS---TGPGIRFFQLYVY----------------------KDR------------NVVAQLVRRAERAGFKAIALTVD 158 (349)
Q Consensus 116 ~i~~---~~~~~~~~Ql~~~----------------------~~~------------~~~~~~~~~~~~~G~~~i~i~~d 158 (349)
.+.+ ....+.++||+.. ..+ +...+.+++++++|+|+|+||..
T Consensus 87 ~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~ 166 (338)
T 1z41_A 87 KLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAA 166 (338)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccc
Confidence 2221 1235678999742 112 23456677888999999999997
Q ss_pred CCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhcCCcEEEEEec--------CH----HHHHHH
Q 018919 159 TPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTITKLPILVKGVL--------TA----EDARIA 221 (349)
Q Consensus 159 ~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~~~pv~vK~v~--------~~----~~a~~a 221 (349)
|.. +-+.|..|.. ..+ ...+ + ....+ .+.++.+|+.++.||.+|+.. +. +.++.+
T Consensus 167 ~gy-------Ll~qFlsp~~-n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l 238 (338)
T 1z41_A 167 HGY-------LIHEFLSPLS-NHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWM 238 (338)
T ss_dssp TTS-------HHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHH
T ss_pred cch-------HHHHccCCCc-CCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHH
Confidence 621 1112222210 000 0001 0 12345 678999999999999999864 23 457888
Q ss_pred HHcCCCEEEEecCCCC-C-CCCch-hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEEEEchHHHH
Q 018919 222 VQAGAAGIIVSNHGAR-Q-LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 222 ~~~G~d~I~v~~~gg~-~-~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V~ig~~~l~ 293 (349)
.++|+|+|.+++.... + ...++ ..++.+.++++.+ ++||++.|||++++++.++|+.| ||+|++||+++.
T Consensus 239 ~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~ 312 (338)
T 1z41_A 239 KEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLR 312 (338)
T ss_dssp HHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred HHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHh
Confidence 9999999999764211 1 11223 2467788888887 79999999999999999999998 999999999985
No 48
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.58 E-value=3.5e-13 Score=128.66 Aligned_cols=223 Identities=18% Similarity=0.192 Sum_probs=141.1
Q ss_pred cceeEcCeecCcceeeccccccccc----CC-hhhHHHHHHHHHcCCeEEecCCCCC--------------C---H---H
Q 018919 61 MNTTVLGFKISMPIMIAPTAMQKMA----HP-EGEYATARAASAAGTIMTLSSWSTS--------------S---V---E 115 (349)
Q Consensus 61 ~s~~l~g~~~~~Pi~iApm~~~~l~----~~-~~~~~la~aa~~~G~~~~~~~~~~~--------------~---~---e 115 (349)
...+|.++++++-|+.|||+...-. .| +.....-..-++.|+.+++++.... + + .
T Consensus 7 ~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~ 86 (340)
T 3gr7_A 7 SPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLR 86 (340)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHH
T ss_pred CCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHH
Confidence 3578889999999999999743211 12 1123333344446666666432110 1 1 1
Q ss_pred HHHh---hCCCceEEEEeecC----------------------Ch------------hHHHHHHHHHHHcCCCEEEEecC
Q 018919 116 EVAS---TGPGIRFFQLYVYK----------------------DR------------NVVAQLVRRAERAGFKAIALTVD 158 (349)
Q Consensus 116 ~i~~---~~~~~~~~Ql~~~~----------------------~~------------~~~~~~~~~~~~~G~~~i~i~~d 158 (349)
.+.+ ......++||.-.. .+ +...+.+++++++|+|+|+||..
T Consensus 87 ~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a 166 (340)
T 3gr7_A 87 ELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAA 166 (340)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 1222 12345688884310 00 12345567778899999999997
Q ss_pred CCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhcCCcEEEEEecC------------HHHHHHH
Q 018919 159 TPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTITKLPILVKGVLT------------AEDARIA 221 (349)
Q Consensus 159 ~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~~~pv~vK~v~~------------~~~a~~a 221 (349)
+- + +-++|..|.. ..+ ...+ + ....+ .+.++.+|+.++.||.+|+... .+.++.+
T Consensus 167 ~G---y----Ll~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L 238 (340)
T 3gr7_A 167 HG---Y----LINEFLSPLS-NRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRM 238 (340)
T ss_dssp TT---C----HHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHH
T ss_pred cc---h----HHHHcCCCcc-CcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHH
Confidence 51 1 1122222210 000 0011 1 11235 6789999999999999999742 3568889
Q ss_pred HHcCCCEEEEecCCCCC--CCCch-hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEEEEchHHHH
Q 018919 222 VQAGAAGIIVSNHGARQ--LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 222 ~~~G~d~I~v~~~gg~~--~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V~ig~~~l~ 293 (349)
.++|+|+|.+++.+... ...++ ..++.+.++++.+ ++||++.|||++++++.++|+.| ||+|++||+++.
T Consensus 239 ~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~la 312 (340)
T 3gr7_A 239 KEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLR 312 (340)
T ss_dssp HHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred HHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHh
Confidence 99999999998532111 11122 2567788888887 79999999999999999999998 999999999985
No 49
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.58 E-value=6.9e-14 Score=134.84 Aligned_cols=218 Identities=18% Similarity=0.154 Sum_probs=142.0
Q ss_pred ceeEcCeecCcceeecccccccccCCh---hhHHHHHHHHHcCCeEEecCCCCC--------------CHH------HHH
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKMAHPE---GEYATARAASAAGTIMTLSSWSTS--------------SVE------EVA 118 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l~~~~---~~~~la~aa~~~G~~~~~~~~~~~--------------~~e------~i~ 118 (349)
..+|.+.+++++|++|||+...-.+++ .+..+..-++++++.++++++... +.+ .+.
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (365)
T 2gou_A 8 PITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVT 87 (365)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHHHHH
Confidence 467889999999999999865321122 255666667777777777654211 122 122
Q ss_pred hh---CCCceEEEEeec-----------------------------------------CCh------------hHHHHHH
Q 018919 119 ST---GPGIRFFQLYVY-----------------------------------------KDR------------NVVAQLV 142 (349)
Q Consensus 119 ~~---~~~~~~~Ql~~~-----------------------------------------~~~------------~~~~~~~ 142 (349)
+. .....++||+-. ..+ +...+.+
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (365)
T 2gou_A 88 EAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAA 167 (365)
T ss_dssp HHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 11 125678999630 112 3445667
Q ss_pred HHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhcCC-cEEEEEecC--
Q 018919 143 RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTITKL-PILVKGVLT-- 214 (349)
Q Consensus 143 ~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~~~-pv~vK~v~~-- 214 (349)
+++.++|+|+|+||..|.. +-+.|..|.. ..+ ...+ + ....+ .+.++.+|+.++- ||.+|+...
T Consensus 168 ~~a~~aGfDgVeih~a~gY-------Ll~qFlsp~~-N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~ 239 (365)
T 2gou_A 168 LNAMEAGFDGIELHAANGY-------LINQFIDSEA-NNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTT 239 (365)
T ss_dssp HHHHHTTCSEEEEECCTTS-------HHHHHHSGGG-CCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCC
T ss_pred HHHHHcCCCEEEEecccch-------hHhhccCCCc-cCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccc
Confidence 7788999999999987621 1111211210 000 0001 0 12345 6789999998843 999998752
Q ss_pred ---------HHH----HHHHHHcCCCEEEEecCCCCCCCCch-hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh
Q 018919 215 ---------AED----ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 280 (349)
Q Consensus 215 ---------~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~ 280 (349)
.++ ++.+.++|+|+|.+++... ...+ ..++.+.++++.+ ++|||+.||| +++++.++|+.
T Consensus 240 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~---~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi-~~~~a~~~l~~ 313 (365)
T 2gou_A 240 LNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDW---DDAPDTPVSFKRALREAY--QGVLIYAGRY-NAEKAEQAIND 313 (365)
T ss_dssp TTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBT---TBCCCCCHHHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHT
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc---CCCCCccHHHHHHHHHHC--CCcEEEeCCC-CHHHHHHHHHC
Confidence 233 7889999999999976321 1111 1356777888877 7999999999 99999999999
Q ss_pred C-CCEEEEchHHHH
Q 018919 281 G-ASGIFIGRPVVY 293 (349)
Q Consensus 281 G-A~~V~ig~~~l~ 293 (349)
| ||+|++||+++.
T Consensus 314 g~aD~V~igR~~i~ 327 (365)
T 2gou_A 314 GLADMIGFGRPFIA 327 (365)
T ss_dssp TSCSEEECCHHHHH
T ss_pred CCcceehhcHHHHh
Confidence 8 999999999985
No 50
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.57 E-value=1.6e-13 Score=132.25 Aligned_cols=219 Identities=15% Similarity=0.101 Sum_probs=143.2
Q ss_pred ceeEcCeecCcceeecccccccccCCh---hhHHHHHHHHHcCCeEEecCCCCC--------------CHH------HHH
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKMAHPE---GEYATARAASAAGTIMTLSSWSTS--------------SVE------EVA 118 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l~~~~---~~~~la~aa~~~G~~~~~~~~~~~--------------~~e------~i~ 118 (349)
..+|.+.+++++|++|||+...-.+++ .+..+..-++++|+.++++++... +.+ .+.
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (364)
T 1vyr_A 8 PLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKIT 87 (364)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHH
Confidence 477889999999999999865310222 355666667777888777654210 122 222
Q ss_pred h---hCCCceEEEEeec-----------------------------------------CCh------------hHHHHHH
Q 018919 119 S---TGPGIRFFQLYVY-----------------------------------------KDR------------NVVAQLV 142 (349)
Q Consensus 119 ~---~~~~~~~~Ql~~~-----------------------------------------~~~------------~~~~~~~ 142 (349)
+ ......++||+-. ..+ +...+.+
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (364)
T 1vyr_A 88 AGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAV 167 (364)
T ss_dssp HHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 1 1235678999720 112 2445677
Q ss_pred HHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC--CCCCch-HHHHHHHHHhcC-CcEEEEEecC--
Q 018919 143 RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG--LDLGKM-DEDVKWLQTITK-LPILVKGVLT-- 214 (349)
Q Consensus 143 ~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~--~~~~~~-~~~i~~i~~~~~-~pv~vK~v~~-- 214 (349)
++++++|+|+|+||..|. + +-++|..|. ...+ ...+ .....+ .+.++.+|+.++ -||.+|+...
T Consensus 168 ~~a~~aGfDgVeih~a~G---y----Ll~qFlsp~-~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~ 239 (364)
T 1vyr_A 168 ANAREAGFDLVELHSAHG---Y----LLHQFLSPS-SNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGT 239 (364)
T ss_dssp HHHHHTTCSEEEEEECTT---S----HHHHHHCTT-TCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSC
T ss_pred HHHHHcCCCEEEEcCccc---h----HHHhccCCc-ccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccc
Confidence 788899999999999762 1 111221121 0000 0001 012345 678999999984 3999998642
Q ss_pred ----------HH----HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh
Q 018919 215 ----------AE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 280 (349)
Q Consensus 215 ----------~~----~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~ 280 (349)
.+ .++.+.++|+|+|.+++.+..+... ..++.+.++++.+ ++|||+.||| +++++.++|+.
T Consensus 240 ~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~--~~~~~~~~v~~~~--~iPvi~~Ggi-t~~~a~~~l~~ 314 (364)
T 1vyr_A 240 FQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKP--YSEAFRQKVRERF--HGVIIGAGAY-TAEKAEDLIGK 314 (364)
T ss_dssp BTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC--CCHHHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHT
T ss_pred cccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCc--ccHHHHHHHHHHC--CCCEEEECCc-CHHHHHHHHHC
Confidence 22 3788899999999997632111111 1356777888877 7999999999 89999999999
Q ss_pred C-CCEEEEchHHHH
Q 018919 281 G-ASGIFIGRPVVY 293 (349)
Q Consensus 281 G-A~~V~ig~~~l~ 293 (349)
| ||+|++||+++.
T Consensus 315 g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 315 GLIDAVAFGRDYIA 328 (364)
T ss_dssp TSCSEEEESHHHHH
T ss_pred CCccEEEECHHHHh
Confidence 8 999999999985
No 51
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.57 E-value=5.3e-14 Score=136.10 Aligned_cols=218 Identities=15% Similarity=0.138 Sum_probs=140.3
Q ss_pred ceeEcCeecCcceeecccccccccCCh---hhHHHHHHHHHcCCeEEecCCCCC--------------CHH------HHH
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKMAHPE---GEYATARAASAAGTIMTLSSWSTS--------------SVE------EVA 118 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l~~~~---~~~~la~aa~~~G~~~~~~~~~~~--------------~~e------~i~ 118 (349)
..+|.+.+++++|++|||+...- ++ .+..+..-++++|+.++++++... +.+ .+.
T Consensus 14 P~~ig~~~l~NRiv~aPm~~~~a--~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 91 (377)
T 2r14_A 14 PLQLGSLSLPNRVIMAPLTRSRT--PDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVV 91 (377)
T ss_dssp CEEETTEEESCSEEECCCCCCCC--TTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEecCCeEECCCcCCcC--CCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence 47888999999999999986421 22 355666667777777666544211 122 222
Q ss_pred h---hCCCceEEEEeec------------------------------------------CCh------------hHHHHH
Q 018919 119 S---TGPGIRFFQLYVY------------------------------------------KDR------------NVVAQL 141 (349)
Q Consensus 119 ~---~~~~~~~~Ql~~~------------------------------------------~~~------------~~~~~~ 141 (349)
+ ......++||+.. ..+ +...+.
T Consensus 92 ~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~a 171 (377)
T 2r14_A 92 EAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQA 171 (377)
T ss_dssp HHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHH
Confidence 1 1235678999641 112 244567
Q ss_pred HHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhcCC-cEEEEEecC-
Q 018919 142 VRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTITKL-PILVKGVLT- 214 (349)
Q Consensus 142 ~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~~~-pv~vK~v~~- 214 (349)
+++++++|+|+|+||..|. + +-++|..|.. ..+ ...+ + ....+ .+.++.+|+.++- ||.+|+...
T Consensus 172 A~~a~~aGfDgVEIh~a~G---Y----Ll~QFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~ 243 (377)
T 2r14_A 172 AQRAKRAGFDMVEVHAANA---C----LPNQFLATGT-NRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFL 243 (377)
T ss_dssp HHHHHHHTCSEEEEEECTT---C----HHHHHHSTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHcCCCEEEEcCccc---c----hHHhccCCcc-ccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEecccc
Confidence 7788899999999998762 1 1122221210 000 0001 0 12234 6789999999853 999998532
Q ss_pred ----------H----HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh
Q 018919 215 ----------A----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 280 (349)
Q Consensus 215 ----------~----~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~ 280 (349)
. +.++.+.++|+|+|.+++....+...+ ..++.+.++++.+ ++|||+.||| +++++.++|+.
T Consensus 244 ~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~--~iPvi~~Ggi-~~~~a~~~l~~ 319 (377)
T 2r14_A 244 ELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRF--KGGLIYCGNY-DAGRAQARLDD 319 (377)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHT
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHC--CCCEEEECCC-CHHHHHHHHHC
Confidence 2 347888999999999975321111111 1356677888877 7999999999 69999999998
Q ss_pred C-CCEEEEchHHHH
Q 018919 281 G-ASGIFIGRPVVY 293 (349)
Q Consensus 281 G-A~~V~ig~~~l~ 293 (349)
| ||+|++||+++.
T Consensus 320 g~aD~V~igR~~l~ 333 (377)
T 2r14_A 320 NTADAVAFGRPFIA 333 (377)
T ss_dssp TSCSEEEESHHHHH
T ss_pred CCceEEeecHHHHh
Confidence 8 999999999985
No 52
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.56 E-value=2.3e-14 Score=162.17 Aligned_cols=210 Identities=16% Similarity=0.193 Sum_probs=142.8
Q ss_pred ccccccCC-CCCCCcceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHH-------Hh
Q 018919 48 FRPRILID-VSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------AS 119 (349)
Q Consensus 48 l~p~~l~~-~~~~d~s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i-------~~ 119 (349)
|.||..+. -.+++++|.|...--..||+.|||++.. .+..|+.+++++|..++++.....+.+++ ++
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg~~PIi~a~M~~~v-----s~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~ 632 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLGVPPVMVAGMTPTT-----VPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEK 632 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHTSCSEEECCCTTTT-----CSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGG
T ss_pred cCCcceecCCCceecchhhhhccccceEEecCCCCcc-----ccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHh
Confidence 56776642 2344556554321115899999998421 14589999999999999943334455443 22
Q ss_pred hC-C-CceEEEEeecCChh---HHHHHHHHHHHcCCCE--EEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch
Q 018919 120 TG-P-GIRFFQLYVYKDRN---VVAQLVRRAERAGFKA--IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM 192 (349)
Q Consensus 120 ~~-~-~~~~~Ql~~~~~~~---~~~~~~~~~~~~G~~~--i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~ 192 (349)
.. | .++.+++... ++. ...+.++.+.+.|++. +.+..+.| ..
T Consensus 633 ~~~~~~p~gvN~~~~-~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p------------------------------~~ 681 (2060)
T 2uva_G 633 AIPPGRGITVNLIYV-NPRAMGWQIPLLGRLRADGVPIEGLTIGAGVP------------------------------SI 681 (2060)
T ss_dssp GSCTTCCEEEEEETT-CTTHHHHHHHHHHHHHTTTCCEEEEEEESSCC------------------------------CH
T ss_pred hcccCCCeEeccccc-CcccchhHHHHHHHHHHcCCCcceEeecCCCC------------------------------CH
Confidence 23 2 5667776542 333 2457788888999998 55544322 11
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHH----HHcCCCEEE---Eec--CCCC-C-CCCchhhHHHHHHHHHHhcCCCc
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIA----VQAGAAGII---VSN--HGAR-Q-LDYVPATIMALEEVVKATQGRIP 261 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a----~~~G~d~I~---v~~--~gg~-~-~~~~~~~~~~l~~i~~~~~~~ip 261 (349)
.+.++.+++ .+++++ +.+.+..+++.+ .++|+|+|+ +.+ .||+ . .+...+.+..++++++.+ ++|
T Consensus 682 e~~~~~l~~-~gi~~i-~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~--~ip 757 (2060)
T 2uva_G 682 EVANEYIQT-LGIRHI-SFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCS--NIV 757 (2060)
T ss_dssp HHHHHHHHH-SCCSEE-EECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTST--TEE
T ss_pred HHHHHHHHH-cCCeEE-EecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHc--CCC
Confidence 123444444 589987 567777777766 999999999 654 2332 1 233466788899998876 799
Q ss_pred EEEecCCCCHHHHHHHH-----------HhCCCEEEEchHHHHHHhh
Q 018919 262 VFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLAA 297 (349)
Q Consensus 262 via~GGI~~~~dv~kal-----------~~GA~~V~ig~~~l~~~~~ 297 (349)
||++|||.+++|++++| ++|||+|++||.|+....+
T Consensus 758 viaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea 804 (2060)
T 2uva_G 758 LVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEA 804 (2060)
T ss_dssp EEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTS
T ss_pred EEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCC
Confidence 99999999999999999 9999999999999865444
No 53
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.53 E-value=2.1e-13 Score=123.23 Aligned_cols=178 Identities=17% Similarity=0.082 Sum_probs=119.9
Q ss_pred cccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCCCceE---EEEeecCCh--hHHHHHHHHHHHcCCCEEEEec
Q 018919 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRF---FQLYVYKDR--NVVAQLVRRAERAGFKAIALTV 157 (349)
Q Consensus 83 ~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~---~Ql~~~~~~--~~~~~~~~~~~~~G~~~i~i~~ 157 (349)
.|.++..-..+|+++.+.|+..+- ..+...++++++....|.+ .+.|...+. ..+.+.++.+.++|++.+.+..
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~-~~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~ 109 (229)
T 3q58_A 31 PMDKPEIVAAMAQAAASAGAVAVR-IEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDA 109 (229)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEE-EESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCcchHHHHHHHHHHCCCcEEE-ECCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECc
Confidence 344555556899999999999753 2222223334433333322 122211100 0123457778899999987543
Q ss_pred CCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCC
Q 018919 158 DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGA 236 (349)
Q Consensus 158 d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg 236 (349)
.. ..+|+. .+.++.+++. ++++++ .+.+.++++++.++|+|.|.+.++|.
T Consensus 110 ~~---------------------------~~~p~~l~~~i~~~~~~-g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~ 160 (229)
T 3q58_A 110 SF---------------------------RSRPVDIDSLLTRIRLH-GLLAMA-DCSTVNEGISCHQKGIEFIGTTLSGY 160 (229)
T ss_dssp CS---------------------------SCCSSCHHHHHHHHHHT-TCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTS
T ss_pred cc---------------------------cCChHHHHHHHHHHHHC-CCEEEE-ecCCHHHHHHHHhCCCCEEEecCccC
Confidence 21 012333 4668888764 787776 57899999999999999997766654
Q ss_pred CCC-CCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 237 RQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 237 ~~~-~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
+.. ....++++.+.++++. ++|||+.|||++++|+.+++++||++|++|++++.
T Consensus 161 t~~~~~~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 161 TGPITPVEPDLAMVTQLSHA---GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp SSSCCCSSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CCCCcCCCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC
Confidence 321 1234578888887763 79999999999999999999999999999999874
No 54
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.52 E-value=8.2e-13 Score=128.75 Aligned_cols=146 Identities=15% Similarity=0.083 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhcC-CcEEEE
Q 018919 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTITK-LPILVK 210 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~~-~pv~vK 210 (349)
...+.+++++++|+|+|+||..+- + +-++|..|. ...+ ...+ + ....+ .+.++.+|+.++ .||.+|
T Consensus 172 ~f~~AA~~a~~AGfDgVEIh~ahG---Y----Ll~QFLsp~-~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vR 243 (402)
T 2hsa_B 172 DYRRSALNAIEAGFDGIEIHGAHG---Y----LIDQFLKDG-INDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVR 243 (402)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTT---S----HHHHHHCTT-TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCccc---h----HHHhccCCc-cCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEE
Confidence 455777888899999999998761 1 112222221 0000 0111 1 12345 678999999985 499999
Q ss_pred EecC---------------HHHHHHHHHcC------CCEEEEecCCCCCCCC--------chhhHHHHHHHHHHhcCCCc
Q 018919 211 GVLT---------------AEDARIAVQAG------AAGIIVSNHGARQLDY--------VPATIMALEEVVKATQGRIP 261 (349)
Q Consensus 211 ~v~~---------------~~~a~~a~~~G------~d~I~v~~~gg~~~~~--------~~~~~~~l~~i~~~~~~~ip 261 (349)
+... .+.++.+.++| +|+|.+++....+... +...++.+.++++.+ ++|
T Consensus 244 ls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~--~iP 321 (402)
T 2hsa_B 244 VSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY--QGT 321 (402)
T ss_dssp ECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC--SSC
T ss_pred eccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHC--CCC
Confidence 7632 24478888999 9999997532111011 112456677788877 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCEEEEchHHHH
Q 018919 262 VFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 262 via~GGI~~~~dv~kal~~G-A~~V~ig~~~l~ 293 (349)
||++||| +++++.++|+.| ||+|++||+++.
T Consensus 322 vi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 322 FICSGGY-TRELGIEAVAQGDADLVSYGRLFIS 353 (402)
T ss_dssp EEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred EEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh
Confidence 9999999 999999999987 999999999985
No 55
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.51 E-value=3.4e-12 Score=122.29 Aligned_cols=145 Identities=22% Similarity=0.282 Sum_probs=101.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-CC-CCch-HHHHHHHHHhc--CCcEEEEE
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-LD-LGKM-DEDVKWLQTIT--KLPILVKG 211 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~~-~~~~-~~~i~~i~~~~--~~pv~vK~ 211 (349)
.+.+++++++|+|+|+||..|- + +-++|..|.. ..+ ...+ +. ...+ .+.++.+|+.+ +.||.+|.
T Consensus 155 ~~aA~~a~~aGfDgVEih~a~G---y----Ll~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRl 226 (349)
T 3hgj_A 155 VEGARRALRAGFQVIELHMAHG---Y----LLSSFLSPLS-NQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRV 226 (349)
T ss_dssp HHHHHHHHHTTCCEEEEEECTT---S----HHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCccc---h----HHHHhcCCcc-cccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 3556777889999999999872 1 1122222210 000 0011 11 1235 67899999998 68999998
Q ss_pred ec--------CHHH----HHHHHHcCCCEEEEecCCCCC---CCCch-hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHH
Q 018919 212 VL--------TAED----ARIAVQAGAAGIIVSNHGARQ---LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVF 275 (349)
Q Consensus 212 v~--------~~~~----a~~a~~~G~d~I~v~~~gg~~---~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~ 275 (349)
.. +.++ ++.+.++|+|+|.+++.+-.. ...++ ..++.+.++++.+ ++||++.|||++++++.
T Consensus 227 s~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~a~ 304 (349)
T 3hgj_A 227 SATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--GLRTGAVGLITTPEQAE 304 (349)
T ss_dssp ESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCCHHHHH
T ss_pred ccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--CceEEEECCCCCHHHHH
Confidence 74 3444 788889999999998532111 11122 3567788888877 79999999999999999
Q ss_pred HHHHhC-CCEEEEchHHHH
Q 018919 276 KALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 276 kal~~G-A~~V~ig~~~l~ 293 (349)
++|+.| ||+|++||+++.
T Consensus 305 ~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 305 TLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp HHHHTTSCSEEEESTHHHH
T ss_pred HHHHCCCceEEEecHHHHh
Confidence 999999 999999999985
No 56
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.51 E-value=7.7e-13 Score=119.71 Aligned_cols=178 Identities=15% Similarity=0.063 Sum_probs=119.2
Q ss_pred cccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCCCceEEEE---eecCCh--hHHHHHHHHHHHcCCCEEEEec
Q 018919 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQL---YVYKDR--NVVAQLVRRAERAGFKAIALTV 157 (349)
Q Consensus 83 ~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~~Ql---~~~~~~--~~~~~~~~~~~~~G~~~i~i~~ 157 (349)
.|.++..-..+|+++.+.|+..+. ..+...++++++....|.+-+. |...+. ....+.++.+.++|++.+.+..
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~-~~~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~ 109 (232)
T 3igs_A 31 PLDKPEIVAAMALAAEQAGAVAVR-IEGIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDG 109 (232)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEE-EESHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCcchHHHHHHHHHHCCCeEEE-ECCHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECc
Confidence 344455556899999999999653 2222223334433333322111 111000 0123457778899999987543
Q ss_pred CCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCC
Q 018919 158 DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGA 236 (349)
Q Consensus 158 d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg 236 (349)
.. ..+|.. .+.++.+++. ++++++ .+.+.++++++.++|+|.|.+.++|.
T Consensus 110 ~~---------------------------~~~p~~l~~~i~~~~~~-g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 110 TA---------------------------RQRPVAVEALLARIHHH-HLLTMA-DCSSVDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp CS---------------------------SCCSSCHHHHHHHHHHT-TCEEEE-ECCSHHHHHHHHHTTCSEEECTTTTS
T ss_pred cc---------------------------cCCHHHHHHHHHHHHHC-CCEEEE-eCCCHHHHHHHHhCCCCEEEEcCccC
Confidence 21 012333 4567777764 787776 57899999999999999997766654
Q ss_pred CCC-CCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 237 RQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 237 ~~~-~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
+.. ....++++.+.++++. ++|||+.|||++++|+.+++++||++|+||++++.
T Consensus 161 t~~~~~~~~~~~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 161 TTPDTPEEPDLPLVKALHDA---GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp SSSSCCSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred CCCCCCCCCCHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcC
Confidence 321 1234578888888764 79999999999999999999999999999999873
No 57
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.50 E-value=6.1e-13 Score=128.63 Aligned_cols=146 Identities=16% Similarity=0.064 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhcCC-cEEEE
Q 018919 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTITKL-PILVK 210 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~~~-pv~vK 210 (349)
...+.+++++++|+|+|+||..|. + +-++|..|. ...+ ...+ + ....+ .+.++.+|+.++- ||.+|
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~G---y----Ll~qFlsp~-~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vr 239 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHG---Y----LIDQFMKDQ-VNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIR 239 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTT---S----HHHHHHCTT-TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCccc---h----hhhhccCCc-ccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEE
Confidence 445677788899999999999762 1 111222121 0000 0011 0 12234 6789999999853 99999
Q ss_pred EecC---------------HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHH
Q 018919 211 GVLT---------------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVF 275 (349)
Q Consensus 211 ~v~~---------------~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~ 275 (349)
.... .+.++.+.++|+|+|.+++....+...+...++.+.++++.+ ++|||+.||| +++++.
T Consensus 240 ls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~--~iPvi~~G~i-~~~~a~ 316 (376)
T 1icp_A 240 ISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY--KGTFIVAGGY-DREDGN 316 (376)
T ss_dssp ECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC--CSCEEEESSC-CHHHHH
T ss_pred eccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc--CCCEEEeCCC-CHHHHH
Confidence 8631 245788889999999997532111101111234456677777 7999999999 899999
Q ss_pred HHHHhC-CCEEEEchHHHH
Q 018919 276 KALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 276 kal~~G-A~~V~ig~~~l~ 293 (349)
++|+.| ||+|++||+++.
T Consensus 317 ~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 317 RALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp HHHHTTSCSEEEESHHHHH
T ss_pred HHHHCCCCcEEeecHHHHh
Confidence 999987 999999999985
No 58
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.46 E-value=7.5e-12 Score=119.45 Aligned_cols=213 Identities=16% Similarity=0.164 Sum_probs=135.3
Q ss_pred ceeEcCeecCcceeecccccccccC----C-hhhHHHHHHHHHcCCeEEecCCCC--------------CCHHH------
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKMAH----P-EGEYATARAASAAGTIMTLSSWST--------------SSVEE------ 116 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l~~----~-~~~~~la~aa~~~G~~~~~~~~~~--------------~~~e~------ 116 (349)
..+|.++++++-|+.|||.... .. | +.....-..-++.|+.+++++... .+.+.
T Consensus 7 P~~ig~~~l~NRiv~apm~~~~-~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~ 85 (343)
T 3kru_A 7 PLKIKDITIKNRIMMSPMCMYS-ASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKK 85 (343)
T ss_dssp CEEETTEEESSSEEECCCCCCC-SCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHH
T ss_pred cceeeeeeeeeeecccchhhee-cccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHH
Confidence 4778899999999999997432 22 2 112233333444566666643211 11121
Q ss_pred HHh---hCCCceEEEEeecC-----------------------Ch------------hHHHHHHHHHHHcCCCEEEEec-
Q 018919 117 VAS---TGPGIRFFQLYVYK-----------------------DR------------NVVAQLVRRAERAGFKAIALTV- 157 (349)
Q Consensus 117 i~~---~~~~~~~~Ql~~~~-----------------------~~------------~~~~~~~~~~~~~G~~~i~i~~- 157 (349)
+.+ ......++||.-.. .+ +...+.+++++++|+|+|+||.
T Consensus 86 ~~~~vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a 165 (343)
T 3kru_A 86 IVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAA 165 (343)
T ss_dssp HHHHHHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecc
Confidence 221 12345678884310 00 1133556777889999999994
Q ss_pred --------CCCCCCchhHHhhhhcCCCCcCcccccCCC-CCCch-HHHHHHHHHhc--CCcEEEEEecC--------H--
Q 018919 158 --------DTPRLGRREADIKNRFTLPPFLTLKNFQGL-DLGKM-DEDVKWLQTIT--KLPILVKGVLT--------A-- 215 (349)
Q Consensus 158 --------d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~-~~~~~-~~~i~~i~~~~--~~pv~vK~v~~--------~-- 215 (349)
-||....|.. .-+.++ ....+ .+.++.+|+.+ +.||.+|+..+ .
T Consensus 166 hGYLl~qFlsp~~N~R~D--------------~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~ 231 (343)
T 3kru_A 166 HGYLIHEFLSPLSNKRKD--------------EYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDM 231 (343)
T ss_dssp TTSHHHHHHCTTTCCCCS--------------TTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHH
T ss_pred cchhHHHhhcccccccch--------------hhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHH
Confidence 3443211110 000001 12345 78899999998 68999999752 3
Q ss_pred --HHHHHHHHcCCCEEEEecCCCCCC---CCch-hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEEEEc
Q 018919 216 --EDARIAVQAGAAGIIVSNHGARQL---DYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIG 288 (349)
Q Consensus 216 --~~a~~a~~~G~d~I~v~~~gg~~~---~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V~ig 288 (349)
+.++.+.++ +|+|.++. |+... ...+ ..++.+.++++.+ ++|||++|||++++++.++|+.| ||+|++|
T Consensus 232 ~~~~a~~l~~~-vd~i~vs~-g~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 232 MVEYINMIKDK-VDLIDVSS-GGLLNVDINLYPGYQVKYAETIKKRC--NIKTSAVGLITTQELAEEILSNERADLVALG 307 (343)
T ss_dssp HHHHHHHHTTT-CSEEEEEC-CCSSCCCCCCCTTTTHHHHHHHHHHH--TCEEEEESSCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHhhcc-ccEEeccC-CceEeeeecccCceeehHHHHHHHhc--CcccceeeeeeHHHHHHHHHhchhhHHHHHH
Confidence 346778888 99999973 22210 1112 2467778888887 79999999999999999999998 9999999
Q ss_pred hHHHH
Q 018919 289 RPVVY 293 (349)
Q Consensus 289 ~~~l~ 293 (349)
|+++.
T Consensus 308 R~~la 312 (343)
T 3kru_A 308 RELLR 312 (343)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99985
No 59
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.45 E-value=5.5e-12 Score=112.94 Aligned_cols=173 Identities=17% Similarity=0.156 Sum_probs=119.1
Q ss_pred hhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCCCceEEEEeecC--Ch----hHHHHHHHHHHHcCCCEEEEecCCCC
Q 018919 88 EGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYK--DR----NVVAQLVRRAERAGFKAIALTVDTPR 161 (349)
Q Consensus 88 ~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~~Ql~~~~--~~----~~~~~~~~~~~~~G~~~i~i~~d~p~ 161 (349)
+....+++++.+.|+.++.. .+...++++++....+. +.+.... +. ....+.++.+.++|++.+.++...-
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~-~~~~~i~~i~~~~~~pv-~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~- 99 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRA-NTKEDILAIKETVDLPV-IGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQ- 99 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEE-ESHHHHHHHHHHCCSCE-EEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCS-
T ss_pred ccHHHHHHHHHHCCCeeecc-CCHHHHHHHHHhcCCCE-EeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecc-
Confidence 34568999999999886532 22222344554433232 2111100 00 0123456777889999988765321
Q ss_pred CCchhHHhhhhcCCCCcCcccccCCCCCC-ch-HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 162 LGRREADIKNRFTLPPFLTLKNFQGLDLG-KM-DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ 238 (349)
Q Consensus 162 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~-~~-~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~ 238 (349)
.+| .. .+.++++++.+ +.++++ .+.++++++.+.++|+|.|.++++|.+.
T Consensus 100 --------------------------~~p~~~~~~~i~~~~~~~~~~~v~~-~~~t~~e~~~~~~~G~d~i~~~~~g~t~ 152 (223)
T 1y0e_A 100 --------------------------QRPKETLDELVSYIRTHAPNVEIMA-DIATVEEAKNAARLGFDYIGTTLHGYTS 152 (223)
T ss_dssp --------------------------CCSSSCHHHHHHHHHHHCTTSEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSST
T ss_pred --------------------------cCcccCHHHHHHHHHHhCCCceEEe-cCCCHHHHHHHHHcCCCEEEeCCCcCcC
Confidence 012 12 56789999877 566654 6788999999999999999887765542
Q ss_pred --CCC--chhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH
Q 018919 239 --LDY--VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 239 --~~~--~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l 292 (349)
.+. ..+.++.+.++++.+ ++||+++|||++++|+.+++++|||+|++|++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 153 YTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp TSTTCCTTHHHHHHHHHHHHHC--CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCCCCCCcccHHHHHHHHhhC--CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHc
Confidence 122 345678888888877 7999999999999999999999999999999975
No 60
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.42 E-value=5.8e-12 Score=130.53 Aligned_cols=222 Identities=14% Similarity=0.110 Sum_probs=139.4
Q ss_pred ceeEcCeecCcceeecccccccccCChh-h--HHHHHHHHHcCCeEEecCCCCC--------------C---H---HHHH
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG-E--YATARAASAAGTIMTLSSWSTS--------------S---V---EEVA 118 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l~~~~~-~--~~la~aa~~~G~~~~~~~~~~~--------------~---~---e~i~ 118 (349)
..+|.+.+++++|++|||+...-..+.. + ...-+.-++.|+.++++++... + + ..+.
T Consensus 8 p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (671)
T 1ps9_A 8 PLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTIT 87 (671)
T ss_dssp CEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHH
T ss_pred CeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHH
Confidence 4678899999999999998532111211 1 2222233366777777644210 1 1 1122
Q ss_pred h---hCCCceEEEEeecC---------------------Ch------------hHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 119 S---TGPGIRFFQLYVYK---------------------DR------------NVVAQLVRRAERAGFKAIALTVDTPRL 162 (349)
Q Consensus 119 ~---~~~~~~~~Ql~~~~---------------------~~------------~~~~~~~~~~~~~G~~~i~i~~d~p~~ 162 (349)
+ ....+.++||+... .+ +...+.+++++++|+|+|+||..+..
T Consensus 88 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gy- 166 (671)
T 1ps9_A 88 EAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGY- 166 (671)
T ss_dssp HHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTS-
T ss_pred HHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccch-
Confidence 1 12356889997520 12 34556778888999999999987621
Q ss_pred CchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhc--CCcEEEEEec--------CH----HHHHHHHH
Q 018919 163 GRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTIT--KLPILVKGVL--------TA----EDARIAVQ 223 (349)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~--~~pv~vK~v~--------~~----~~a~~a~~ 223 (349)
+-++|..|.. ..+ ...+ + ....+ .+.++.+|+.+ +.||.+|+.. +. +.++.+.+
T Consensus 167 ------l~~qFlsp~~-n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~ 239 (671)
T 1ps9_A 167 ------LINEFLTLRT-NQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEA 239 (671)
T ss_dssp ------HHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHH
T ss_pred ------HHHHhCCCcc-CCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh
Confidence 1122222210 000 0011 0 12345 67899999998 7899999863 23 44778889
Q ss_pred cCCCEEEEecCCCCC------CCCchh-hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEEEEchHHHH
Q 018919 224 AGAAGIIVSNHGARQ------LDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 224 ~G~d~I~v~~~gg~~------~~~~~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V~ig~~~l~ 293 (349)
+|+|+|.+++....+ ....+. .++.+.++++.+ ++||++.|||.+++++.++|+.| ||+|++||+++.
T Consensus 240 ~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 240 AGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV--SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLA 315 (671)
T ss_dssp HTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC--SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred cCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc--CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHh
Confidence 999999997521100 111111 246666666655 79999999999999999999998 999999999985
No 61
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.40 E-value=9.7e-12 Score=121.69 Aligned_cols=146 Identities=15% Similarity=0.188 Sum_probs=99.2
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CC-Cch-HHHHHHHHHhc------CCc
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DL-GKM-DEDVKWLQTIT------KLP 206 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~-~~~-~~~i~~i~~~~------~~p 206 (349)
.+.+++++++|+|+|+||..+- + +-++|..|.. ..+ ...| + .+ ..| .+.++.+|+.+ +.|
T Consensus 173 ~~AA~rA~~AGfDgVEIH~ahG---Y----Ll~QFlSp~~-N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~ 244 (419)
T 3l5a_A 173 RDATLRAIKAGFDGVEISIAQR---L----LIQTFFSTFS-NRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFI 244 (419)
T ss_dssp HHHHHHHHHTTCSEEEEECCTT---S----HHHHHHCTTT-CCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHHcCCCEEEECCccc---h----HHHHccCCcc-cccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCee
Confidence 4566778889999999998761 1 1222322310 001 1111 1 11 245 68899999887 579
Q ss_pred EEEEEec----------CH----HHHHHHHH-cCCCEEEEecCCC-----CCCCCch-hhHHHHHHHHHHhcCCCcEEEe
Q 018919 207 ILVKGVL----------TA----EDARIAVQ-AGAAGIIVSNHGA-----RQLDYVP-ATIMALEEVVKATQGRIPVFLD 265 (349)
Q Consensus 207 v~vK~v~----------~~----~~a~~a~~-~G~d~I~v~~~gg-----~~~~~~~-~~~~~l~~i~~~~~~~ipvia~ 265 (349)
|.+|+.. +. +.++.+.+ +|+|+|.|++.+. .+...++ ..+..+..+++.+++++|||+.
T Consensus 245 v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~ 324 (419)
T 3l5a_A 245 LGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIAS 324 (419)
T ss_dssp EEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEEC
T ss_pred EEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEE
Confidence 9999753 23 34777888 9999999986432 1111122 1335566777777557999999
Q ss_pred cCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 266 GGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 266 GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
|||++++++.++|+. ||+|++||+++.
T Consensus 325 GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 325 GGINSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp SSCCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred CCCCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 999999999999999 999999999974
No 62
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.39 E-value=3.6e-11 Score=115.73 Aligned_cols=145 Identities=21% Similarity=0.189 Sum_probs=99.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-CCC-Cch-HHHHHHHHHhc--CCcEEEEE
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-LDL-GKM-DEDVKWLQTIT--KLPILVKG 211 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~~~-~~~-~~~i~~i~~~~--~~pv~vK~ 211 (349)
.+.+++++++|+|+|+||..+ |+- -+.|..|.. ..+ ...+ +.+ ..+ .+.++.+|+.+ +.||.+|+
T Consensus 161 ~~aA~~a~~aGfDgVEih~a~---GyL----l~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRi 232 (363)
T 3l5l_A 161 VDAARRARDAGFEWIELHFAH---GYL----GQSFFSEHS-NKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARF 232 (363)
T ss_dssp HHHHHHHHHHTCSEEEEEECT---TSH----HHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEcccc---chH----HHHccCCCc-CCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEe
Confidence 355677788999999999864 111 122222210 000 0011 111 234 67899999988 57999998
Q ss_pred ecC---------H----HHHHHHHHcCCCEEEEecCCCCC---CCCch-hhHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 018919 212 VLT---------A----EDARIAVQAGAAGIIVSNHGARQ---LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDV 274 (349)
Q Consensus 212 v~~---------~----~~a~~a~~~G~d~I~v~~~gg~~---~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv 274 (349)
..+ . +.++.+.++|+|+|.+++.+... ...++ ..++.+.++++.+ ++||++.|||++++++
T Consensus 233 s~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~GgI~s~e~a 310 (363)
T 3l5l_A 233 GVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA--KLPVTSAWGFGTPQLA 310 (363)
T ss_dssp EEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCCEEECSSTTSHHHH
T ss_pred cchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc--CCcEEEeCCCCCHHHH
Confidence 632 2 33788899999999998632111 11222 2467778888877 7999999999999999
Q ss_pred HHHHHhC-CCEEEEchHHHH
Q 018919 275 FKALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 275 ~kal~~G-A~~V~ig~~~l~ 293 (349)
.++|+.| ||+|++||+++.
T Consensus 311 ~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 311 EAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp HHHHHTTSCSEEECCHHHHH
T ss_pred HHHHHCCCccEEEecHHHHh
Confidence 9999998 999999999985
No 63
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.39 E-value=1.1e-11 Score=129.71 Aligned_cols=221 Identities=13% Similarity=0.102 Sum_probs=136.8
Q ss_pred ceeEcCeecCcceeecccccccc-cCChhhHHHHHHHHHcCCeEEecCCCC---------C------CHH------HHHh
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKM-AHPEGEYATARAASAAGTIMTLSSWST---------S------SVE------EVAS 119 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l-~~~~~~~~la~aa~~~G~~~~~~~~~~---------~------~~e------~i~~ 119 (349)
..+|.+++++++|++|||+...- ..|.....+-+.-++.|+.++++++.. . +.+ .+.+
T Consensus 12 p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (729)
T 1o94_A 12 PIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTD 91 (729)
T ss_dssp CEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHH
T ss_pred CeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHH
Confidence 47788999999999999975321 122211222223336677777653310 0 111 1211
Q ss_pred -h--CCCceEEEEeecC--------------------------C------------hhHHHHHHHHHHHcCCCEEEEecC
Q 018919 120 -T--GPGIRFFQLYVYK--------------------------D------------RNVVAQLVRRAERAGFKAIALTVD 158 (349)
Q Consensus 120 -~--~~~~~~~Ql~~~~--------------------------~------------~~~~~~~~~~~~~~G~~~i~i~~d 158 (349)
. ...+.++||+... . .+...+.+++++++|+|+|+||..
T Consensus 92 ~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a 171 (729)
T 1o94_A 92 EVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGA 171 (729)
T ss_dssp HHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 1 2256789997620 0 134456778888999999999987
Q ss_pred CCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhc--CCcEEEEEec---------C-H----HH
Q 018919 159 TPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTIT--KLPILVKGVL---------T-A----ED 217 (349)
Q Consensus 159 ~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~--~~pv~vK~v~---------~-~----~~ 217 (349)
+. + +-++|..|. ...+ ...| + ....| .+.++.+|+.+ +.||.+|+.. + . +.
T Consensus 172 ~g---y----Ll~qFlsp~-~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~ 243 (729)
T 1o94_A 172 HS---Y----LPLQFLNPY-YNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKF 243 (729)
T ss_dssp TT---C----HHHHHHCTT-TCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHH
T ss_pred cc---h----HHHHhcCCc-cCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHH
Confidence 72 1 122232221 0000 0111 1 12456 78899999998 7899999963 1 2 23
Q ss_pred HHHHHHcCCCEEEEecCCC-----C---CCCCchh-hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEEEE
Q 018919 218 ARIAVQAGAAGIIVSNHGA-----R---QLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFI 287 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg-----~---~~~~~~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V~i 287 (349)
++.+.+ |+|.+.+++.+. . +....+. .+..+.++++.+ ++|||+.|||.+++++.++|+.| ||+|++
T Consensus 244 ~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 244 VEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS--KKPVLGVGRYTDPEKMIEIVTKGYADIIGC 320 (729)
T ss_dssp HHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC--SSCEECCSCCCCHHHHHHHHHTTSCSBEEE
T ss_pred HHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHC--CCEEEEeCCCCCHHHHHHHHHCCCCCEEEe
Confidence 444444 899999875321 0 1111111 356677777766 79999999999999999999987 999999
Q ss_pred chHHHH
Q 018919 288 GRPVVY 293 (349)
Q Consensus 288 g~~~l~ 293 (349)
||+++.
T Consensus 321 gR~~l~ 326 (729)
T 1o94_A 321 ARPSIA 326 (729)
T ss_dssp SHHHHH
T ss_pred Cchhhc
Confidence 999974
No 64
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.37 E-value=2.4e-11 Score=126.33 Aligned_cols=221 Identities=13% Similarity=0.042 Sum_probs=137.0
Q ss_pred ceeEcCeecCcceeecccccccccCChhh--HHHHHHHHHcCCeEEecCCCCC---------------C---HH---HHH
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGE--YATARAASAAGTIMTLSSWSTS---------------S---VE---EVA 118 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l~~~~~~--~~la~aa~~~G~~~~~~~~~~~---------------~---~e---~i~ 118 (349)
..+|.+++++++|++|||+... ..+..+ ..+.+..++.|+.++++++... + ++ ++.
T Consensus 17 p~~ig~~~l~NRiv~apm~~~~-~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (690)
T 3k30_A 17 PVQIGPFTTKNRFYQVPHCNGM-GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIA 95 (690)
T ss_dssp CCEETTEECSSSEEECCCCCSC-SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHH
T ss_pred CeeECCEEECCCeEeCCCcCCC-CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHH
Confidence 4788899999999999997532 222211 2344456677877777643210 0 11 121
Q ss_pred h---hCCCceEEEEeecC-------------------------C---------------hhHHHHHHHHHHHcCCCEEEE
Q 018919 119 S---TGPGIRFFQLYVYK-------------------------D---------------RNVVAQLVRRAERAGFKAIAL 155 (349)
Q Consensus 119 ~---~~~~~~~~Ql~~~~-------------------------~---------------~~~~~~~~~~~~~~G~~~i~i 155 (349)
+ ......++||+-.. + .+...+.+++++++|+|+|+|
T Consensus 96 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVei 175 (690)
T 3k30_A 96 DAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYV 175 (690)
T ss_dssp HHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 1 12356789997310 0 133456778888999999999
Q ss_pred ecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhc--CCcEEEEEecC--------HH----
Q 018919 156 TVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTIT--KLPILVKGVLT--------AE---- 216 (349)
Q Consensus 156 ~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~--~~pv~vK~v~~--------~~---- 216 (349)
|..+... +-+.|..|. ...+ ...| + ....| .+.++.+|+.+ +.||.+|...+ .+
T Consensus 176 h~a~gy~------L~~qFlsp~-~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~ 248 (690)
T 3k30_A 176 YGAHGYS------GVHHFLSKR-YNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEG 248 (690)
T ss_dssp EECTTCS------HHHHHHCTT-TCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHH
T ss_pred cccccch------HHHHhCCCc-cCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHH
Confidence 9876420 122333331 0000 0111 1 12345 68899999998 57899998532 33
Q ss_pred HHHHHHHcCCCEEEEecCCC----C-CCCCch-hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEEEEch
Q 018919 217 DARIAVQAGAAGIIVSNHGA----R-QLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGR 289 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg----~-~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V~ig~ 289 (349)
.++.+.+ |+|.+.++..+. . .....+ ..++.+.++++.+ ++|||+.|||++++++.++|+.| ||+|++||
T Consensus 249 ~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR 325 (690)
T 3k30_A 249 VLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT--TKPVVGVGRFTSPDAMVRQIKAGILDLIGAAR 325 (690)
T ss_dssp HHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC--SSCEEECSCCCCHHHHHHHHHTTSCSEEEESH
T ss_pred HHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc--CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcH
Confidence 3555555 899999974210 0 011111 1245555666665 79999999999999999999987 99999999
Q ss_pred HHHH
Q 018919 290 PVVY 293 (349)
Q Consensus 290 ~~l~ 293 (349)
+++.
T Consensus 326 ~~~~ 329 (690)
T 3k30_A 326 PSIA 329 (690)
T ss_dssp HHHH
T ss_pred HhHh
Confidence 9874
No 65
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.33 E-value=9e-11 Score=112.65 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=95.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-C-CCCch-HHHHHHHHHhcCC-cEEEEEe
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-L-DLGKM-DEDVKWLQTITKL-PILVKGV 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~-~~~~~-~~~i~~i~~~~~~-pv~vK~v 212 (349)
.+.+++++++|+|+|+||..+ |+ +-++|..|. ...+ ...| + ....+ .+.++.+|+.++- ||.+|+.
T Consensus 164 ~~AA~~A~~aGfDgVEih~a~---GY----Ll~QFLsp~-~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls 235 (361)
T 3gka_A 164 RRGAENARAAGFDGVEVHGAN---GY----LLDQFLQDS-ANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLA 235 (361)
T ss_dssp HHHHHHHHHTTCSEEEEECCT---TS----HHHHHHSTT-TCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCcC---cc----HHHhccCcc-cccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecc
Confidence 356677788999999999876 11 112222221 0000 0111 1 12345 7889999999843 9999987
Q ss_pred cC-----------H----HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 018919 213 LT-----------A----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 277 (349)
Q Consensus 213 ~~-----------~----~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~ka 277 (349)
.. . +.++.+.++|+|+|.+++.. .++ +.+.++++.+ ++|||+.||| +++++.++
T Consensus 236 ~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~~~--~iPvi~~Ggi-t~e~a~~~ 304 (361)
T 3gka_A 236 PRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF-----GGD---AIGQQLKAAF--GGPFIVNENF-TLDSAQAA 304 (361)
T ss_dssp TTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-----STT---CCHHHHHHHH--CSCEEEESSC-CHHHHHHH
T ss_pred cccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC-----CCH---HHHHHHHHHc--CCCEEEeCCC-CHHHHHHH
Confidence 42 2 34788889999999997532 122 3456677777 6899999999 99999999
Q ss_pred HHhC-CCEEEEchHHHH
Q 018919 278 LALG-ASGIFIGRPVVY 293 (349)
Q Consensus 278 l~~G-A~~V~ig~~~l~ 293 (349)
|+.| ||+|++||+++.
T Consensus 305 l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 305 LDAGQADAVAWGKLFIA 321 (361)
T ss_dssp HHTTSCSEEEESHHHHH
T ss_pred HHcCCccEEEECHHhHh
Confidence 9987 999999999985
No 66
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.32 E-value=9.6e-11 Score=112.49 Aligned_cols=136 Identities=18% Similarity=0.128 Sum_probs=94.2
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc--ccCC-CC-CCch-HHHHHHHHHhcCC-cEEEEEe
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK--NFQG-LD-LGKM-DEDVKWLQTITKL-PILVKGV 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~--~~~~-~~-~~~~-~~~i~~i~~~~~~-pv~vK~v 212 (349)
.+.+++++++|+|+|+||..|- + +-++|..|. ...+ ...| +. ...+ .+.++.+|+.++- ||.+|+.
T Consensus 156 ~~AA~~a~~aGfDgVEih~a~G---Y----Ll~QFLSp~-~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls 227 (362)
T 4ab4_A 156 RSGAENAKAAGFDGVEIHGANG---Y----LLDQFLQSS-TNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLA 227 (362)
T ss_dssp HHHHHHHHHTTCSEEEEECCTT---S----HHHHHHSTT-TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCcCc---c----HHHhhcCCc-cccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEee
Confidence 3556777889999999999761 1 112222221 0000 0111 11 1235 6789999999843 9999986
Q ss_pred cC-----------H----HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 018919 213 LT-----------A----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 277 (349)
Q Consensus 213 ~~-----------~----~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~ka 277 (349)
.. . +.++.+.++|+|+|.+++.. .++ +.+.++++.+ ++|||+.||| +++++.++
T Consensus 228 ~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~~~--~iPvi~~Ggi-t~e~a~~~ 296 (362)
T 4ab4_A 228 PRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE-----ADD---SIGPLIKEAF--GGPYIVNERF-DKASANAA 296 (362)
T ss_dssp TTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC-----CTT---CCHHHHHHHH--CSCEEEESSC-CHHHHHHH
T ss_pred ccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC-----CCH---HHHHHHHHHC--CCCEEEeCCC-CHHHHHHH
Confidence 42 2 33778889999999997532 122 2456677777 7899999999 99999999
Q ss_pred HHhC-CCEEEEchHHHH
Q 018919 278 LALG-ASGIFIGRPVVY 293 (349)
Q Consensus 278 l~~G-A~~V~ig~~~l~ 293 (349)
|+.| ||+|++||+++.
T Consensus 297 l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 297 LASGKADAVAFGVPFIA 313 (362)
T ss_dssp HHTTSCSEEEESHHHHH
T ss_pred HHcCCccEEEECHHhHh
Confidence 9987 999999999985
No 67
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.32 E-value=6e-10 Score=102.61 Aligned_cols=198 Identities=15% Similarity=0.107 Sum_probs=118.1
Q ss_pred ceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEE-ecC-CC---CCCHHHHHhhCC---CceEEEEeecC
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSS-WS---TSSVEEVASTGP---GIRFFQLYVYK 133 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~-~~~-~~---~~~~e~i~~~~~---~~~~~Ql~~~~ 133 (349)
.++|.|++|++|++++.-++ |+.+ .+.++..+.|+..+ ++- .+ ..+++++.+..+ .+.+.+.....
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~-----p~~~-~~~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~~~~~~~pn~~~~~ 76 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKY-----PSFD-IQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDLSKYTLLPNTAGAS 76 (264)
T ss_dssp CEEETTEEESCCEEEECSCS-----SCHH-HHHHHHHHHTCSEEEEETTSSTTC-------CTTCCGGGSEEEEECTTCS
T ss_pred CeEECCEEecCCCEEEecCC-----CCHH-HHHHHHHHcCCeEEEEcccccccCCCCHHHHHHHHHhcCCeEcCCccccC
Confidence 47899999999999998543 3333 33467777787655 231 11 122344433322 12223333224
Q ss_pred ChhHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~-G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~--~~pv~vK 210 (349)
+.+.....++.+.++ |.+.+.+++ ... .|. . -++..+.++..++.+ ++.++.-
T Consensus 77 ~~~~~~~f~~~a~~agg~~~i~l~i--~~d------------~~~--~--------~~e~~~~~~~a~~~~~~g~~vi~~ 132 (264)
T 1xm3_A 77 TAEEAVRIARLAKASGLCDMIKVEV--IGC------------SRS--L--------LPDPVETLKASEQLLEEGFIVLPY 132 (264)
T ss_dssp SHHHHHHHHHHHHHTTCCSSEEECC--BCC------------TTT--C--------CBCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCeEEEee--cCC------------Ccc--c--------ccchHHHHHHHHHHHCCCeEEEEE
Confidence 445444566777776 455554433 100 010 0 011124456665543 5666543
Q ss_pred EecCHHHHHHHHHcCCCEEEEecC-CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 211 GVLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 211 ~v~~~~~a~~a~~~G~d~I~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
...+.+.++++.+.|+|+|...+. -|.. .+....+.+..+++.. ++||++.|||++++|+.+++++|||+|.||+
T Consensus 133 ~~~~~~~a~~~~~~gad~v~~~~~~~Gt~--~~~~~~~~l~~i~~~~--~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 133 TSDDVVLARKLEELGVHAIMPGASPIGSG--QGILNPLNLSFIIEQA--KVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp ECSCHHHHHHHHHHTCSCBEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred cCCCHHHHHHHHHhCCCEEEECCcccCCC--CCCCCHHHHHHHHhcC--CCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 456789999999999999943221 1111 1222356777777754 7999999999999999999999999999999
Q ss_pred HHHH
Q 018919 290 PVVY 293 (349)
Q Consensus 290 ~~l~ 293 (349)
+++.
T Consensus 209 Ai~~ 212 (264)
T 1xm3_A 209 AVSG 212 (264)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9874
No 68
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=99.26 E-value=3.3e-10 Score=104.45 Aligned_cols=170 Identities=15% Similarity=0.145 Sum_probs=110.0
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccc-----cCCCCCCch-HHHHHHHHHh-cCC
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKN-----FQGLDLGKM-DEDVKWLQTI-TKL 205 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~-----~~~~~~~~~-~~~i~~i~~~-~~~ 205 (349)
.+.+.+.+.++.+++.|+|.|++.+....+- -+|..+.. ...-.+.+. ++.++++|+. .++
T Consensus 31 P~~~~~~~~~~~l~~~GaD~iElGiPfSDP~------------aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~ 98 (271)
T 3nav_A 31 PNPEQSLAIMQTLIDAGADALELGMPFSDPL------------ADGPTIQGANLRALAAKTTPDICFELIAQIRARNPET 98 (271)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCCCGG------------GCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCC------------CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 3567889999999999999999877431110 01111100 000012223 6889999988 689
Q ss_pred cEEEEEecCH-------HHHHHHHHcCCCEEEEec---------------CCCC--------------------------
Q 018919 206 PILVKGVLTA-------EDARIAVQAGAAGIIVSN---------------HGAR-------------------------- 237 (349)
Q Consensus 206 pv~vK~v~~~-------~~a~~a~~~G~d~I~v~~---------------~gg~-------------------------- 237 (349)
|+++.+..++ +.++.|.++|+|++++.. ||-.
T Consensus 99 Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY 178 (271)
T 3nav_A 99 PIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTY 178 (271)
T ss_dssp CEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEE
T ss_pred CEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEE
Confidence 9998775432 458999999999988851 1100
Q ss_pred --CCC--Cch------hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhc--CHHHHHH
Q 018919 238 --QLD--YVP------ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAE--GEKGVRR 305 (349)
Q Consensus 238 --~~~--~~~------~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~--G~~gv~~ 305 (349)
... +|. ...+.+.++++.. ++||++.+||++++++.+++..|||+|.||++++..+... ..+...+
T Consensus 179 ~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~~i~~~~~~~~~~~~ 256 (271)
T 3nav_A 179 LLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAISGSAVVKIIETHLDNPAKQLT 256 (271)
T ss_dssp ECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHTTTCHHHHHH
T ss_pred EEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhhccchHHHHH
Confidence 000 111 1235566666655 7999999999999999889999999999999999876532 2222223
Q ss_pred HHHHHHHHHHH
Q 018919 306 VLEMLREEFEL 316 (349)
Q Consensus 306 ~l~~l~~el~~ 316 (349)
.+..+.++|+.
T Consensus 257 ~~~~~~~~l~~ 267 (271)
T 3nav_A 257 ELANFTQAMKK 267 (271)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555555553
No 69
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=99.24 E-value=2.1e-10 Score=105.64 Aligned_cols=169 Identities=16% Similarity=0.150 Sum_probs=108.8
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccccc-----CCCCCCch-HHHHHHHHHh-cCCc
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNF-----QGLDLGKM-DEDVKWLQTI-TKLP 206 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~-----~~~~~~~~-~~~i~~i~~~-~~~p 206 (349)
+.+.+.+.++.++++|+|.|++.+....+ +-+|...... ..-.+.+. ++.++++|+. .++|
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP------------~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~P 97 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDP------------LADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMP 97 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCC------------TTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCC------------CCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 44788999999999999999987643111 0011111000 00012223 6889999988 7999
Q ss_pred EEEEEecCH-------HHHHHHHHcCCCEEEEec---------------CCC---------CC-----------------
Q 018919 207 ILVKGVLTA-------EDARIAVQAGAAGIIVSN---------------HGA---------RQ----------------- 238 (349)
Q Consensus 207 v~vK~v~~~-------~~a~~a~~~G~d~I~v~~---------------~gg---------~~----------------- 238 (349)
+++.+..++ ..++.+.++|+|++++.. +|- +.
T Consensus 98 ivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~ 177 (267)
T 3vnd_A 98 IGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYL 177 (267)
T ss_dssp EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEE
T ss_pred EEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 988766443 458999999999998851 110 00
Q ss_pred --CC--Cc-h-----hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhc--CHHHHHHH
Q 018919 239 --LD--YV-P-----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAE--GEKGVRRV 306 (349)
Q Consensus 239 --~~--~~-~-----~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~--G~~gv~~~ 306 (349)
.. .| . ...+.+.++++.. ++||++.|||++++++.+++..|||+|.+|++++..+... ..+...+.
T Consensus 178 vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~~i~~~~~~~~~~~~~ 255 (267)
T 3vnd_A 178 LSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVVKIIEAHQHDEATLLAK 255 (267)
T ss_dssp SCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHTSSCHHHHHHH
T ss_pred EecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHHHHHHhccChHHHHHH
Confidence 00 11 1 1235566665554 7999999999999999889999999999999998876532 12222334
Q ss_pred HHHHHHHHHH
Q 018919 307 LEMLREEFEL 316 (349)
Q Consensus 307 l~~l~~el~~ 316 (349)
+..+.++|+.
T Consensus 256 ~~~~~~~l~~ 265 (267)
T 3vnd_A 256 LAEFTTAMKA 265 (267)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4555555553
No 70
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.23 E-value=8.2e-11 Score=105.87 Aligned_cols=124 Identities=21% Similarity=0.237 Sum_probs=92.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v----- 212 (349)
...++++.+.|++.+.+.++... ++. .+.+. .+.++.+++..+ |+++|.+
T Consensus 73 ~~~~~~A~~~Gad~Id~viN~g~-------~~~----------------~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~ 128 (225)
T 1mzh_A 73 VKEAVEAVRDGAQELDIVWNLSA-------FKS----------------EKYDFVVEELKEIFRETP-SAVHKVIVETPY 128 (225)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHH-------HHT----------------TCHHHHHHHHHHHHHTCT-TSEEEEECCGGG
T ss_pred HHHHHHHHHcCCCEEEEEecHHH-------Hhc----------------CChHHHHHHHHHHHHHhc-CceEEEEEeCCC
Confidence 35567888899999986554311 010 02223 567999999888 9999994
Q ss_pred cCH----HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 LTA----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 ~~~----~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+. +.++.+.++|+|+|.+ ++|. ..+..+++.+..+++.+++++||+++|||++++|+.+++++||+.|+++
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~t-stg~---~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s 204 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKT-STGF---APRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTS 204 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEC-CCSC---SSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCHHHHHHHHHHHHHhCCCEEEE-CCCC---CCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHc
Confidence 243 3478889999999954 3432 2234578888888888866899999999999999999999999988877
Q ss_pred hH
Q 018919 289 RP 290 (349)
Q Consensus 289 ~~ 290 (349)
+.
T Consensus 205 ~~ 206 (225)
T 1mzh_A 205 SG 206 (225)
T ss_dssp CH
T ss_pred cH
Confidence 64
No 71
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.23 E-value=7.3e-10 Score=99.87 Aligned_cols=177 Identities=16% Similarity=0.156 Sum_probs=114.9
Q ss_pred cCCh--hhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCCCceEEEEeecC--Ch----hHHHHHHHHHHHcCCCEEEEe
Q 018919 85 AHPE--GEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYK--DR----NVVAQLVRRAERAGFKAIALT 156 (349)
Q Consensus 85 ~~~~--~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~~Ql~~~~--~~----~~~~~~~~~~~~~G~~~i~i~ 156 (349)
.+++ .-..+++++.+.|+..+.- .+...++.+++....+ ++.+.... +. +...+.++.+.++|++.+.++
T Consensus 31 ~~~~~~~~~~~a~~~~~~G~~~i~~-~~~~~i~~i~~~~~~p-~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~ 108 (234)
T 1yxy_A 31 YSETGGIMPLMAKAAQEAGAVGIRA-NSVRDIKEIQAITDLP-IIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMD 108 (234)
T ss_dssp CCTTCCSHHHHHHHHHHHTCSEEEE-ESHHHHHHHHTTCCSC-EEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEE
T ss_pred cCCccchHHHHHHHHHHCCCcEeec-CCHHHHHHHHHhCCCC-EEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEc
Confidence 3444 3468999999999886531 1222234444433323 22221100 00 113456788889999998876
Q ss_pred cCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEE--EEec
Q 018919 157 VDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGI--IVSN 233 (349)
Q Consensus 157 ~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I--~v~~ 233 (349)
...-. -|. +....+.++.+++.+ +.++++ .+.++++++.+.++|+|.| .+.+
T Consensus 109 ~~~~~-------------~~~-----------~~~~~~~i~~i~~~~~~~~v~~-~~~t~~ea~~a~~~Gad~i~~~v~g 163 (234)
T 1yxy_A 109 CTKRD-------------RHD-----------GLDIASFIRQVKEKYPNQLLMA-DISTFDEGLVAHQAGIDFVGTTLSG 163 (234)
T ss_dssp CCSSC-------------CTT-----------CCCHHHHHHHHHHHCTTCEEEE-ECSSHHHHHHHHHTTCSEEECTTTT
T ss_pred ccccC-------------CCC-----------CccHHHHHHHHHHhCCCCeEEE-eCCCHHHHHHHHHcCCCEEeeeccc
Confidence 54210 010 011256789998877 666665 5678999999999999999 4543
Q ss_pred CC-CCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH
Q 018919 234 HG-ARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 234 ~g-g~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l 292 (349)
.. +.+ ....+.++.+.++++. ++||+++|||++.+|+.+++++|||+|++||+++
T Consensus 164 ~~~~~~-~~~~~~~~~i~~~~~~---~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 164 YTPYSR-QEAGPDVALIEALCKA---GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp SSTTSC-CSSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHH
T ss_pred cCCCCc-CCCCCCHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHh
Confidence 21 211 1123457777777664 6999999999999999999999999999999876
No 72
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.21 E-value=1e-10 Score=132.06 Aligned_cols=206 Identities=13% Similarity=0.185 Sum_probs=133.4
Q ss_pred ccccccCCCCC---CCcc-eeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH----h
Q 018919 48 FRPRILIDVSK---IDMN-TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA----S 119 (349)
Q Consensus 48 l~p~~l~~~~~---~d~s-~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~----~ 119 (349)
|.|+..+..+. .+|. |+++|+ .||+.+||+... .+..|+.|++++|..+.+...+..+.++++ +
T Consensus 565 f~PrLv~~~~g~~~~~t~~t~llg~---~PIi~~gM~~~~-----~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~ 636 (2051)
T 2uv8_G 565 YHPKLIKNKSGKIFVETKFSKLIGR---PPLLVPGMTPCT-----VSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDS 636 (2051)
T ss_dssp TCCEEEECSSCCEEEECHHHHHHSS---CSEEECCCHHHH-----TCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHH
T ss_pred cCCccccCCCCchhHHHHHHHhhCc---cceecCCCcccc-----ccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHH
Confidence 56766542221 2333 556783 699999997321 145899999999999999544434454432 2
Q ss_pred h----C-CCceEEEEeecCChh---HHHHHHHHHHHcCCCE--EEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCC
Q 018919 120 T----G-PGIRFFQLYVYKDRN---VVAQLVRRAERAGFKA--IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL 189 (349)
Q Consensus 120 ~----~-~~~~~~Ql~~~~~~~---~~~~~~~~~~~~G~~~--i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~ 189 (349)
. . +.++.+++... ++. .-.++++.+.+.|++. +.+..+.|
T Consensus 637 ~~~~t~~~~~~gvN~~~~-~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p----------------------------- 686 (2051)
T 2uv8_G 637 VVSQIEKGSTFGINLIYV-NPFMLQWGIPLIKELRSKGYPIQFLTIGAGVP----------------------------- 686 (2051)
T ss_dssp HHHHSCTTCCEEEEEETT-CTTHHHHHHHHHHHHHHTTCSEEEEEEESSCC-----------------------------
T ss_pred HHHhcCCCCceEEEEeec-ChhhhhhhHHHHHHHHHcCCCcceEEecCCCC-----------------------------
Confidence 1 1 25677776432 332 1237788888999998 44433222
Q ss_pred CchHHHHHHHHHhcCCcEEEEEecC---HHHHHHHHHcCCCEE-E--EecC--CCCC--CCCchhhHHHHHHHHHHhcCC
Q 018919 190 GKMDEDVKWLQTITKLPILVKGVLT---AEDARIAVQAGAAGI-I--VSNH--GARQ--LDYVPATIMALEEVVKATQGR 259 (349)
Q Consensus 190 ~~~~~~i~~i~~~~~~pv~vK~v~~---~~~a~~a~~~G~d~I-~--v~~~--gg~~--~~~~~~~~~~l~~i~~~~~~~ 259 (349)
..-..++.+. .++++++.....+ ...++.+.++|+|++ + +.|. ||+. .+.....+..++++++.+ +
T Consensus 687 -~~~~~~~~i~-~lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~--~ 762 (2051)
T 2uv8_G 687 -SLEVASEYIE-TLGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHP--N 762 (2051)
T ss_dssp -CHHHHHHHHH-HSCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCT--T
T ss_pred -chhhHHHHHH-HcCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcC--C
Confidence 1112233333 3488887644433 345677888999993 3 3332 4431 123355667788888877 8
Q ss_pred CcEEEecCCCCHHHHHHHH-----------HhCCCEEEEchHHHHHH
Q 018919 260 IPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSL 295 (349)
Q Consensus 260 ipvia~GGI~~~~dv~kal-----------~~GA~~V~ig~~~l~~~ 295 (349)
+|||+.|||.++.+++.+| ++|||+|+|||.|+.+.
T Consensus 763 ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~ 809 (2051)
T 2uv8_G 763 IMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAK 809 (2051)
T ss_dssp BCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTST
T ss_pred ceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCc
Confidence 9999999999999999999 89999999999998643
No 73
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=99.19 E-value=2e-09 Score=98.84 Aligned_cols=173 Identities=20% Similarity=0.187 Sum_probs=105.9
Q ss_pred hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEec
Q 018919 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVL 213 (349)
Q Consensus 135 ~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~ 213 (349)
.+.+.+.++.+++.|++.|++.+....+-..-..++... .+....-.+.+. .+.++++|+.+++|+++....
T Consensus 31 ~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~-------~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~ 103 (262)
T 1rd5_A 31 LATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASV-------ARALASGTTMDAVLEMLREVTPELSCPVVLLSYY 103 (262)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHH-------HHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHH-------HHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 367788899999999999998764321000000000000 000000012333 677999998889998875433
Q ss_pred CHH---HHHHHHHcCCCEEEEecCC---------------C---------CC-------------------CC--Cc---
Q 018919 214 TAE---DARIAVQAGAAGIIVSNHG---------------A---------RQ-------------------LD--YV--- 242 (349)
Q Consensus 214 ~~~---~a~~a~~~G~d~I~v~~~g---------------g---------~~-------------------~~--~~--- 242 (349)
++. ..+.+.++|+|+|++.... - +. .. +|
T Consensus 104 ~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~ 183 (262)
T 1rd5_A 104 KPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRA 183 (262)
T ss_dssp HHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTS
T ss_pred cHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCc
Confidence 332 1344889999998875311 0 00 00 11
Q ss_pred ---hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhh-cCHHHHHHHHHHHHHHHHH
Q 018919 243 ---PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA-EGEKGVRRVLEMLREEFEL 316 (349)
Q Consensus 243 ---~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~-~G~~gv~~~l~~l~~el~~ 316 (349)
+...+.+.++++.. ++||++.|||++++++.+++++|||+|.+||+++..... .......+.+..+.++|+.
T Consensus 184 ~~~~~~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (262)
T 1rd5_A 184 NVNPRVESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKN 259 (262)
T ss_dssp CBCTHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHSSSSHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhHHHhccChhHHHHHHHHHHHHHHH
Confidence 12345677777765 799999999999999999999999999999999876532 2222223345556666554
No 74
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=99.17 E-value=2.2e-09 Score=99.01 Aligned_cols=168 Identities=15% Similarity=0.121 Sum_probs=107.7
Q ss_pred cCCh--hHHHHHHHHHHHcCCCEEEEecCCCC---CCchh-----HHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHH
Q 018919 132 YKDR--NVVAQLVRRAERAGFKAIALTVDTPR---LGRRE-----ADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQ 200 (349)
Q Consensus 132 ~~~~--~~~~~~~~~~~~~G~~~i~i~~d~p~---~g~r~-----~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~ 200 (349)
..++ +.+.+.++.+++.|+|+|++.+.... .|.-. +-+.++ ..... .+.++++|
T Consensus 25 ~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G---------------~~~~~~~~~v~~ir 89 (268)
T 1qop_A 25 LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAG---------------VTPAQCFEMLAIIR 89 (268)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT---------------CCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcC---------------CCHHHHHHHHHHHH
Confidence 3444 77888999999999999998663210 01000 000100 11122 57799999
Q ss_pred Hh-cCCcEEEEEecC-------HHHHHHHHHcCCCEEEEec---------------CCC---------CC----------
Q 018919 201 TI-TKLPILVKGVLT-------AEDARIAVQAGAAGIIVSN---------------HGA---------RQ---------- 238 (349)
Q Consensus 201 ~~-~~~pv~vK~v~~-------~~~a~~a~~~G~d~I~v~~---------------~gg---------~~---------- 238 (349)
+. .++|+++-...+ .+.++.+.++|+|++++.. ||- +.
T Consensus 90 ~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~ 169 (268)
T 1qop_A 90 EKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASY 169 (268)
T ss_dssp HHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHH
T ss_pred hcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhh
Confidence 98 799987633223 3678889999999998852 110 00
Q ss_pred ---------C--CCc------hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhc--C
Q 018919 239 ---------L--DYV------PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAE--G 299 (349)
Q Consensus 239 ---------~--~~~------~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~--G 299 (349)
. .+| +...+.+.++++.. ++||+++|||++++++.+++..|||+|.+||+++...... .
T Consensus 170 ~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~~~~~~~~~ 247 (268)
T 1qop_A 170 GRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIEKNLAS 247 (268)
T ss_dssp CCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHTTTC
T ss_pred CCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhhHhhcccC
Confidence 0 011 11256777777665 7999999999999999999999999999999998765321 2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018919 300 EKGVRRVLEMLREEFEL 316 (349)
Q Consensus 300 ~~gv~~~l~~l~~el~~ 316 (349)
.+...+.+..+.++++.
T Consensus 248 ~~~~~~~~~~~~~~l~~ 264 (268)
T 1qop_A 248 PKQMLAELRSFVSAMKA 264 (268)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHH
Confidence 12212334555555543
No 75
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.15 E-value=9.1e-09 Score=92.95 Aligned_cols=197 Identities=15% Similarity=0.185 Sum_probs=120.7
Q ss_pred ceeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCC------HHHHHhhCCCceEEEEee----
Q 018919 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSS------VEEVASTGPGIRFFQLYV---- 131 (349)
Q Consensus 62 s~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~------~e~i~~~~~~~~~~Ql~~---- 131 (349)
..+|.|++|.+.+++..=-+ .+ ...+.++....|+-.+.-...... .+.+.+..+.. -+.+.+
T Consensus 10 ~l~i~~~~f~SRl~~Gtgky---~~---~~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~~i~~~-~~~~lpNTag 82 (265)
T 1wv2_A 10 PFVIAGRTYGSRLLVGTGKY---KD---LDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPPD-RYTILPNTAG 82 (265)
T ss_dssp CEEETTEEESCCEEECCSCS---SS---HHHHHHHHHHSCCSEEEEEGGGCCC-------------CTT-TSEEEEECTT
T ss_pred CeEECCEEeecceEEecCCC---CC---HHHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHhhhhhc-CCEECCcCCC
Confidence 48899999999999876222 11 235777778888876542221111 12333322210 112222
Q ss_pred cCChhHHHHHHHHHHH-c-CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHh--cCCcE
Q 018919 132 YKDRNVVAQLVRRAER-A-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTI--TKLPI 207 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~-~-G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~--~~~pv 207 (349)
..+.+.-...++.+++ + |-++|-+-+-.-. .+. -|+..+.++..+.. -+..+
T Consensus 83 ~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~----------~~l--------------lpD~~~tv~aa~~L~~~Gf~V 138 (265)
T 1wv2_A 83 CYDAVEAVRTCRLARELLDGHNLVKLEVLADQ----------KTL--------------FPNVVETLKAAEQLVKDGFDV 138 (265)
T ss_dssp CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCT----------TTC--------------CBCHHHHHHHHHHHHTTTCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCc----------ccc--------------CcCHHHHHHHHHHHHHCCCEE
Confidence 2344444555566666 4 6777765442110 011 12223334333332 26666
Q ss_pred EEEEecCHHHHHHHHHcCCCEEEEecC-CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEE
Q 018919 208 LVKGVLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 286 (349)
Q Consensus 208 ~vK~v~~~~~a~~a~~~G~d~I~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ 286 (349)
+.-...++..++++.++|+++|..-+. -|+ ..|..+++.|..+++.. ++|||++|||.+++|+.+++++|||+|+
T Consensus 139 lpy~~dd~~~akrl~~~G~~aVmPlg~pIGs--G~Gi~~~~lI~~I~e~~--~vPVI~eGGI~TPsDAa~AmeLGAdgVl 214 (265)
T 1wv2_A 139 MVYTSDDPIIARQLAEIGCIAVMPLAGLIGS--GLGICNPYNLRIILEEA--KVPVLVDAGVGTASDAAIAMELGCEAVL 214 (265)
T ss_dssp EEEECSCHHHHHHHHHSCCSEEEECSSSTTC--CCCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred EEEeCCCHHHHHHHHHhCCCEEEeCCccCCC--CCCcCCHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 644568999999999999999976332 111 12445678888888865 8999999999999999999999999999
Q ss_pred EchHHHH
Q 018919 287 IGRPVVY 293 (349)
Q Consensus 287 ig~~~l~ 293 (349)
+|+++..
T Consensus 215 VgSAI~~ 221 (265)
T 1wv2_A 215 MNTAIAH 221 (265)
T ss_dssp ESHHHHT
T ss_pred EChHHhC
Confidence 9999874
No 76
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.12 E-value=2e-09 Score=95.01 Aligned_cols=129 Identities=21% Similarity=0.166 Sum_probs=90.0
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc--CCcEEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~--~~pv~v 209 (349)
..+.+...+.++.+.+.|++.+++++.+|.. .+.++.+|+.+ +.+|.+
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~------------------------------~~~i~~ir~~~~~~~~ig~ 67 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTVPDA------------------------------DTVIKELSFLKEKGAIIGA 67 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTSTTH------------------------------HHHHHHTHHHHHTTCEEEE
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCChhH------------------------------HHHHHHHHHHCCCCcEEEe
Confidence 3577788888999999999999998875420 24477777765 344544
Q ss_pred EEecCHHHHHHHHHcCCCEEEEecCCC-------------------CC---------------CCC-chhhHHHHHHHHH
Q 018919 210 KGVLTAEDARIAVQAGAAGIIVSNHGA-------------------RQ---------------LDY-VPATIMALEEVVK 254 (349)
Q Consensus 210 K~v~~~~~a~~a~~~G~d~I~v~~~gg-------------------~~---------------~~~-~~~~~~~l~~i~~ 254 (349)
..+.++++++.+.++|+|+| ++.... +. ... .....+.+.++++
T Consensus 68 ~~v~~~~~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~ 146 (205)
T 1wa3_A 68 GTVTSVEQCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKG 146 (205)
T ss_dssp ESCCSHHHHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHH
Confidence 44568888888888888888 542211 00 000 0112344555554
Q ss_pred HhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 255 ATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 255 ~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.++ ++||+++|||. .+++.+++.+||++|.+||.++.
T Consensus 147 ~~~-~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 147 PFP-NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp TCT-TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred hCC-CCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC
Confidence 443 79999999996 78999999999999999999874
No 77
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=99.08 E-value=4e-10 Score=105.10 Aligned_cols=107 Identities=21% Similarity=0.281 Sum_probs=79.6
Q ss_pred cCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCC-----------------------CC-------chhhHHHHHHH
Q 018919 203 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL-----------------------DY-------VPATIMALEEV 252 (349)
Q Consensus 203 ~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~-----------------------~~-------~~~~~~~l~~i 252 (349)
.+.++++ .+.+.++++++.++|+|.|.+.|.+|+.. +. ...+++.++++
T Consensus 124 ~g~~vvv-~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i 202 (297)
T 4adt_A 124 FKTPFVC-GCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLT 202 (297)
T ss_dssp CSSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHH
T ss_pred CCCeEEE-EeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHH
Confidence 4788887 68899999999999999999987655321 01 13457788888
Q ss_pred HHHhcCCCcEE--EecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 018919 253 VKATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAM 318 (349)
Q Consensus 253 ~~~~~~~ipvi--a~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m 318 (349)
.+.+ ++||+ +.|||++++|+.+++++|||+|++|++++.+ +.....++.+.+.++.++
T Consensus 203 ~~~~--~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a------~dp~~~~~~l~~ai~~~~ 262 (297)
T 4adt_A 203 RKLK--RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFES------ENPQKMASSIVMAVSNFN 262 (297)
T ss_dssp HHHT--SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTS------SCHHHHHHHHHHHHHTTT
T ss_pred HHhc--CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcC------CCHHHHHHHHHHHHHhhC
Confidence 8776 56776 9999999999999999999999999999852 122234455555554433
No 78
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.08 E-value=4.6e-09 Score=95.38 Aligned_cols=163 Identities=21% Similarity=0.214 Sum_probs=107.3
Q ss_pred CCh--hHHHHHHHHHHHcCCCEEEEecC--CCCC-Cchh-----HHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHH
Q 018919 133 KDR--NVVAQLVRRAERAGFKAIALTVD--TPRL-GRRE-----ADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQT 201 (349)
Q Consensus 133 ~~~--~~~~~~~~~~~~~G~~~i~i~~d--~p~~-g~r~-----~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~ 201 (349)
.|+ +.+.+.++.+++. ++.|++++. .|.. |... +-++++ .+... .+.++++|+
T Consensus 14 ~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g---------------~~~~~~~~~i~~i~~ 77 (248)
T 1geq_A 14 GDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNG---------------FKLREAFWIVKEFRR 77 (248)
T ss_dssp TSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTT---------------CCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCC---------------CCHHHHHHHHHHHHh
Confidence 455 5778889999888 999987732 1110 1000 000010 12233 678999999
Q ss_pred hcCCcEEEEEecC-------HHHHHHHHHcCCCEEEEecC---------------CC---------CC----------CC
Q 018919 202 ITKLPILVKGVLT-------AEDARIAVQAGAAGIIVSNH---------------GA---------RQ----------LD 240 (349)
Q Consensus 202 ~~~~pv~vK~v~~-------~~~a~~a~~~G~d~I~v~~~---------------gg---------~~----------~~ 240 (349)
.+++||.+.+..+ .+.++.+.++|+|+|++..- |- +. .+
T Consensus 78 ~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d 157 (248)
T 1geq_A 78 HSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTT 157 (248)
T ss_dssp TCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCS
T ss_pred hCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCC
Confidence 8899999877544 37899999999999998631 10 00 01
Q ss_pred -----------Cc------hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHH
Q 018919 241 -----------YV------PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGV 303 (349)
Q Consensus 241 -----------~~------~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv 303 (349)
.| +..++.+.++++.+ ++||+++|||++++++.+++.+|||+|.+|++++.....+. +.+
T Consensus 158 ~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~~~~~~-~~~ 234 (248)
T 1geq_A 158 GFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKG-REA 234 (248)
T ss_dssp SEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHG-GGC
T ss_pred CeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhhHhhCh-HHH
Confidence 01 22356777777766 79999999999999999999999999999999987532111 334
Q ss_pred HHHHHHHHHHH
Q 018919 304 RRVLEMLREEF 314 (349)
Q Consensus 304 ~~~l~~l~~el 314 (349)
.++++.+++.+
T Consensus 235 ~~~~~~~~~~~ 245 (248)
T 1geq_A 235 TEFLKKKVEEL 245 (248)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 44444444443
No 79
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=99.06 E-value=3.2e-10 Score=106.09 Aligned_cols=198 Identities=16% Similarity=0.140 Sum_probs=124.5
Q ss_pred HHHHHHHHHcCCeEEec-C--------C----CCCCHHHHH---hhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEE
Q 018919 91 YATARAASAAGTIMTLS-S--------W----STSSVEEVA---STGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIA 154 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~-~--------~----~~~~~e~i~---~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~ 154 (349)
..+++++.+.|+..+.- + . ....++.+. +....|...... ..+ .+.++.+.++|++.+.
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~-~~~----~~~~~~~~~aGad~v~ 105 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVR-IGH----FVEAMILEAIGVDFID 105 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEE-TTC----HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEec-cCC----HHHHHHHHHCCCCEEe
Confidence 37889999999876621 1 0 112333333 322233333221 122 5678888899999984
Q ss_pred EecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHH-hcCCcEEEEEecCHHHHHHHHHcCCCEEEEec
Q 018919 155 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQT-ITKLPILVKGVLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 155 i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~-~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
.+.+.+ .+ +.++.+++ ..++++++. +.+++++..+.++|+|.|.+.+
T Consensus 106 ~~~~~~--------------~~-----------------~~~~~~~~~~~~i~l~~~-v~~~~~~~~a~~~Gad~I~v~G 153 (297)
T 2zbt_A 106 ESEVLT--------------PA-----------------DEEHHIDKWKFKVPFVCG-ARNLGEALRRIAEGAAMIRTKG 153 (297)
T ss_dssp EETTSC--------------CS-----------------CSSCCCCGGGCSSCEEEE-ESSHHHHHHHHHTTCSEEEECC
T ss_pred eeCCCC--------------hH-----------------HHHHHHHHhCCCceEEee-cCCHHHHHHHHHcCCCEEEEcc
Confidence 332110 01 01111222 137788764 6789999999999999998852
Q ss_pred CCCCC---------------------CCC---------chhhHHHHHHHHHHhcCCCcEE--EecCCCCHHHHHHHHHhC
Q 018919 234 HGARQ---------------------LDY---------VPATIMALEEVVKATQGRIPVF--LDGGVRRGTDVFKALALG 281 (349)
Q Consensus 234 ~gg~~---------------------~~~---------~~~~~~~l~~i~~~~~~~ipvi--a~GGI~~~~dv~kal~~G 281 (349)
..+.. ... .+..++.+.++++.. ++|++ ++|||++++|+.+++++|
T Consensus 154 ~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~~a~GGI~~~e~i~~~~~aG 231 (297)
T 2zbt_A 154 EAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHG--RLPVVNFAAGGIATPADAALMMHLG 231 (297)
T ss_dssp CSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHS--SCSSCEEBCSSCCSHHHHHHHHHTT
T ss_pred cccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhc--CCCcEEEeeCCCCCHHHHHHHHHcC
Confidence 10100 000 123456777777765 68888 999999999999999999
Q ss_pred CCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 018919 282 ASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 333 (349)
Q Consensus 282 A~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 333 (349)
||+|++||+++.+ . .....++.+++.++.++...++.+++|+.+..
T Consensus 232 adgvvvGsai~~~---~---dp~~~~~~l~~~i~~~~~~~~~~~~~~~~g~~ 277 (297)
T 2zbt_A 232 MDGVFVGSGIFKS---G---DPRKRARAIVRAVAHYNDPEVLAEVSEDLGEP 277 (297)
T ss_dssp CSEEEECGGGGGS---S---CHHHHHHHHHHHHHTTTCHHHHHHHHTTCCCC
T ss_pred CCEEEEchHHhCC---C---CHHHHHHHHHHHHHHHhchHhhhHHHHhcCce
Confidence 9999999998741 1 13456677777777777666677777777655
No 80
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=99.05 E-value=1.1e-08 Score=94.33 Aligned_cols=165 Identities=15% Similarity=0.132 Sum_probs=111.3
Q ss_pred HHHHHHHHHcCCeEE--ecCCC--CCCHHHHH---hhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 018919 91 YATARAASAAGTIMT--LSSWS--TSSVEEVA---STGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG 163 (349)
Q Consensus 91 ~~la~aa~~~G~~~~--~~~~~--~~~~e~i~---~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g 163 (349)
..+|+...+.|+..+ ++... .-+++++. +...-|...+=|. .|+. .+..+.++|++++.+....
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi-~d~~----qi~ea~~~GAD~VlLi~a~---- 152 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKDFL-FDPY----QVYEARSWGADCILIIMAS---- 152 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSSSCEEEESCC-CSTH----HHHHHHHTTCSEEEEETTT----
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhcCCCEEECCcc-CCHH----HHHHHHHcCCCEEEEcccc----
Confidence 379999999997643 22211 12455543 3333333333232 3433 4667788999998865421
Q ss_pred chhHHhhhhcCCCCcCcccccCCCCCCchHHH-HHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCc
Q 018919 164 RREADIKNRFTLPPFLTLKNFQGLDLGKMDED-VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYV 242 (349)
Q Consensus 164 ~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~-i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~ 242 (349)
.+....+. ++..+ ..++-+++ .+.+.++++++.++|+|.|-+.|...+.+
T Consensus 153 ------------------------L~~~~l~~l~~~a~-~lGl~~lv-evh~~eEl~~A~~~ga~iIGinnr~l~t~--- 203 (272)
T 3tsm_A 153 ------------------------VDDDLAKELEDTAF-ALGMDALI-EVHDEAEMERALKLSSRLLGVNNRNLRSF--- 203 (272)
T ss_dssp ------------------------SCHHHHHHHHHHHH-HTTCEEEE-EECSHHHHHHHTTSCCSEEEEECBCTTTC---
T ss_pred ------------------------cCHHHHHHHHHHHH-HcCCeEEE-EeCCHHHHHHHHhcCCCEEEECCCCCccC---
Confidence 11111223 33333 35777665 46899999999999999998876644322
Q ss_pred hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 243 PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 243 ~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
...++...++.+.++.++|+|+.|||++++|+.++..+||++|.||++++.
T Consensus 204 ~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr 254 (272)
T 3tsm_A 204 EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMR 254 (272)
T ss_dssp CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHT
T ss_pred CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcC
Confidence 234556667777776679999999999999999999999999999999986
No 81
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=99.05 E-value=2.8e-09 Score=98.46 Aligned_cols=165 Identities=18% Similarity=0.176 Sum_probs=107.8
Q ss_pred HHHHHHHHHcCCeEE--ecCC-----CCCCHHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 018919 91 YATARAASAAGTIMT--LSSW-----STSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG 163 (349)
Q Consensus 91 ~~la~aa~~~G~~~~--~~~~-----~~~~~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g 163 (349)
..+|++..+.|+..+ ++.. +...++++++...-|.... |.-.....++.+.+.|++++.+....
T Consensus 75 ~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPvl~k-----dfiid~~qv~~A~~~GAD~VlLi~a~---- 145 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRK-----DFVVQPYQIHEARAHGADMLLLIVAA---- 145 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCEEEE-----SCCCSHHHHHHHHHTTCSEEEEEGGG----
T ss_pred HHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCEEEC-----ccccCHHHHHHHHHcCCCEEEEeccc----
Confidence 378999999997754 1111 1112333444333233222 22122224677788999998774321
Q ss_pred chhHHhhhhcCCCCcCcccccCCCCCCchHHH-HHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCc
Q 018919 164 RREADIKNRFTLPPFLTLKNFQGLDLGKMDED-VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYV 242 (349)
Q Consensus 164 ~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~-i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~ 242 (349)
.++..... ++..+ .+++.+++ .+.+.++++++.++|+|.|.+.|...+ .-
T Consensus 146 ------------------------l~~~~l~~l~~~a~-~lGl~~lv-ev~t~ee~~~A~~~Gad~IGv~~r~l~---~~ 196 (272)
T 3qja_A 146 ------------------------LEQSVLVSMLDRTE-SLGMTALV-EVHTEQEADRALKAGAKVIGVNARDLM---TL 196 (272)
T ss_dssp ------------------------SCHHHHHHHHHHHH-HTTCEEEE-EESSHHHHHHHHHHTCSEEEEESBCTT---TC
T ss_pred ------------------------CCHHHHHHHHHHHH-HCCCcEEE-EcCCHHHHHHHHHCCCCEEEECCCccc---cc
Confidence 01111222 33333 46888776 568899999999999999999754322 22
Q ss_pred hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 243 PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 243 ~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
...++.+.++.+.++.++|+++.|||++++|+.+++.+||++|.||++++.
T Consensus 197 ~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~ 247 (272)
T 3qja_A 197 DVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVT 247 (272)
T ss_dssp CBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHT
T ss_pred ccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 234455667766665579999999999999999999999999999999985
No 82
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.05 E-value=3.3e-10 Score=132.10 Aligned_cols=210 Identities=17% Similarity=0.206 Sum_probs=134.2
Q ss_pred cccccccCCC-CC--CCcc-eeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHH-----
Q 018919 47 LFRPRILIDV-SK--IDMN-TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV----- 117 (349)
Q Consensus 47 ~l~p~~l~~~-~~--~d~s-~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i----- 117 (349)
.|.|+..... .. .++. ++++| ..||+.+||++.. + ...|+.++.++|..+.++..+..+++.+
T Consensus 402 ~f~P~l~~~~~g~~~~~t~~~~~lg---~~PIi~a~M~~~~-s----~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~ 473 (3089)
T 3zen_D 402 SYAPTVVKLPDGSVKLETKFTRLTG---RSPILLAGMTPTT-V----DAKIVAAAANAGHWAELAGGGQVTEQIFNDRIA 473 (3089)
T ss_dssp GGCCEEEECTTCCEEEECHHHHHHS---SCSEEECCCHHHH-T----SHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHH
T ss_pred ccCCcccccCCCcccccchhhhhcC---CCCEEeCCCcCCc-C----CHHHHHHHHhCCCceeecCCCCCCHHHHHHHHH
Confidence 4667665422 12 2222 44566 5799999998542 2 3479999999999999965544344433
Q ss_pred --HhhC--CCceEEEEeecCChhH------HHHHHHHHHHcC--CCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccC
Q 018919 118 --ASTG--PGIRFFQLYVYKDRNV------VAQLVRRAERAG--FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ 185 (349)
Q Consensus 118 --~~~~--~~~~~~Ql~~~~~~~~------~~~~~~~~~~~G--~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~ 185 (349)
++.. +.++.+++.. .++.. ..+.++.+.+.| ++++.++.+.|.
T Consensus 474 ~~r~~~~~~~p~~vNl~~-~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~------------------------ 528 (3089)
T 3zen_D 474 ELETLLEPGRAIQFNTLF-LDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPD------------------------ 528 (3089)
T ss_dssp HHHHHSCTTCCCEEEEEC-SCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCC------------------------
T ss_pred HHHHhcCCCCceeechhh-cChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCc------------------------
Confidence 2223 2345455432 23432 146788888999 667877665541
Q ss_pred CCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCC------EEEEecC--CCCCCCCchhhHHHHHHHHHHh
Q 018919 186 GLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAA------GIIVSNH--GARQLDYVPATIMALEEVVKAT 256 (349)
Q Consensus 186 ~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d------~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~ 256 (349)
.+. .+.++.+++ .++.++.=.+.+.++++++.+.|+| +|++.+. ||+.. .......+.+....+
T Consensus 529 ----~ee~~~~i~~l~~-~Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g--~~~~~~ll~~~~~~i 601 (3089)
T 3zen_D 529 ----LEEAVDIIDELNE-VGISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHHS--WEDLDDLLLATYSEL 601 (3089)
T ss_dssp ----HHHHHHHHTSTTH-HHHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSEECC--SCCHHHHHHHHHHHH
T ss_pred ----hhHhHHHHHHHHH-cCCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCCC--cccHHHHHHHHHHHH
Confidence 011 133555554 3555554236788999999999999 7888653 33321 123344453333332
Q ss_pred c--CCCcEEEecCCCCHHHHHHHH-----------HhCCCEEEEchHHHHHHh
Q 018919 257 Q--GRIPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLA 296 (349)
Q Consensus 257 ~--~~ipvia~GGI~~~~dv~kal-----------~~GA~~V~ig~~~l~~~~ 296 (349)
+ .++||++.|||.+++++..+| ++|||+|++||.|+....
T Consensus 602 r~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 602 RSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLE 654 (3089)
T ss_dssp TTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTT
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCcc
Confidence 2 279999999999999999999 999999999999986543
No 83
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.01 E-value=4.4e-10 Score=105.62 Aligned_cols=78 Identities=22% Similarity=0.297 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHhcCCCcEE--EecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHcC
Q 018919 245 TIMALEEVVKATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSG 322 (349)
Q Consensus 245 ~~~~l~~i~~~~~~~ipvi--a~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G 322 (349)
.++.+.++++.. ++||+ +.|||++++|+.+++.+||++|++||+++.. +. ....++.+.+.+..++...+
T Consensus 195 ~~~~i~~i~~~~--~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~----~~--p~~~~~~l~~~~~~~~~~~~ 266 (305)
T 2nv1_A 195 PYELLLQIKKDG--KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS----DN--PAKFAKAIVEATTHFTDYKL 266 (305)
T ss_dssp CHHHHHHHHHHT--SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGS----SC--HHHHHHHHHHHHHTTTCHHH
T ss_pred cHHHHHHHHHhc--CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcC----CC--HHHHHHHHHHHHHHhcChhh
Confidence 356666766654 78998 9999999999999999999999999998742 11 12345555565555544444
Q ss_pred CCChhhhc
Q 018919 323 CRSLKEIT 330 (349)
Q Consensus 323 ~~~i~~l~ 330 (349)
..++.++.
T Consensus 267 ~~~~~~~~ 274 (305)
T 2nv1_A 267 IAELSKEL 274 (305)
T ss_dssp HHHHTSCC
T ss_pred HHHHHHHh
Confidence 43444443
No 84
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=99.01 E-value=1.8e-08 Score=92.64 Aligned_cols=145 Identities=17% Similarity=0.140 Sum_probs=96.6
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCC---CCchh-----HHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPR---LGRRE-----ADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT- 203 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~---~g~r~-----~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~- 203 (349)
+.+.+.+.++.+.+.|+|+|++.+.... .|.-. +-+.++ .+.+. .+.++++|+..
T Consensus 29 ~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G---------------~~~~~~~~~v~~ir~~~~ 93 (262)
T 2ekc_A 29 DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNG---------------IRFEDVLELSETLRKEFP 93 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTT---------------CCHHHHHHHHHHHHHHCT
T ss_pred ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcC---------------CCHHHHHHHHHHHHhhcC
Confidence 4567788899999999999998663211 01000 001111 11122 57799999988
Q ss_pred CCcEEEEEecC-------HHHHHHHHHcCCCEEEEec---------------CCCC-----CC-----------------
Q 018919 204 KLPILVKGVLT-------AEDARIAVQAGAAGIIVSN---------------HGAR-----QL----------------- 239 (349)
Q Consensus 204 ~~pv~vK~v~~-------~~~a~~a~~~G~d~I~v~~---------------~gg~-----~~----------------- 239 (349)
++|+++-+..+ .+.++.+.++|+|++++.. ||-. ..
T Consensus 94 ~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gf 173 (262)
T 2ekc_A 94 DIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEM 173 (262)
T ss_dssp TSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSC
T ss_pred CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCC
Confidence 89998743333 3567889999999998752 1100 00
Q ss_pred ------C--Cc-------hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHh
Q 018919 240 ------D--YV-------PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 296 (349)
Q Consensus 240 ------~--~~-------~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~ 296 (349)
. .| ....+.+.++++.. ++||++.+||++++++.+ +..|||+|.+||+++....
T Consensus 174 iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~~~ 242 (262)
T 2ekc_A 174 TYFVSVTGTTGAREKLPYERIKKKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKLAG 242 (262)
T ss_dssp EEEESSCC---------CHHHHHHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHHHH
T ss_pred EEEEecCCccCCCCCcCcccHHHHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhhhh
Confidence 0 01 11225566666654 799999999999999988 8899999999999998653
No 85
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.00 E-value=1.2e-08 Score=92.79 Aligned_cols=166 Identities=19% Similarity=0.259 Sum_probs=107.8
Q ss_pred hHHHHHHHHHcCCeEEecCCC-------------CCCHHHHHhhCC--CceEEEEeecCChhHHHHHHHHHHHcCCCEEE
Q 018919 90 EYATARAASAAGTIMTLSSWS-------------TSSVEEVASTGP--GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIA 154 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~~-------------~~~~e~i~~~~~--~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~ 154 (349)
+...|+.+.++|...+.--.. ...++.|.+... ....+-+..-.. ...++.++++|+|.|.
T Consensus 20 ~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~righ----~~EAqilea~GaD~ID 95 (291)
T 3o07_A 20 TPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGH----FVEAQIIEALEVDYID 95 (291)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTC----HHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhCCCCeEEEEecCc----HHHHHHHHHcCCCEEe
Confidence 457899999999876542110 123444443322 222333332111 3456778889999884
Q ss_pred EecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHH-HhcCCcEEEEEecCHHHHHHHHHcCCCEEEEec
Q 018919 155 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQ-TITKLPILVKGVLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 155 i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
-+ +. ..|. . .+..+. ..+++|+++ ++.+.++|.++++.|+|.|-..+
T Consensus 96 es-ev--------------ltpa-----d-----------~~~~I~k~~f~vpfv~-~~~~l~EAlrri~eGA~mIrTtg 143 (291)
T 3o07_A 96 ES-EV--------------LTPA-----D-----------WTHHIEKDKFKVPFVC-GAKDLGEALRRINEGAAMIRTKG 143 (291)
T ss_dssp EE-TT--------------SCCS-----C-----------SSCCCCGGGCSSCEEE-EESSHHHHHHHHHHTCSEEEECC
T ss_pred cc-cC--------------CCHH-----H-----------HHHHhhhhcCCCcEEe-eCCCHHHHHHHHHCCCCEEEecC
Confidence 32 10 0011 0 111111 245889987 68899999999999999999865
Q ss_pred CCCCC---------------------C-CC---------chhhHHHHHHHHHHhcCCCcE--EEecCCCCHHHHHHHHHh
Q 018919 234 HGARQ---------------------L-DY---------VPATIMALEEVVKATQGRIPV--FLDGGVRRGTDVFKALAL 280 (349)
Q Consensus 234 ~gg~~---------------------~-~~---------~~~~~~~l~~i~~~~~~~ipv--ia~GGI~~~~dv~kal~~ 280 (349)
..|+. + +. -.++++.+.++++.. ++|| |++|||.|++|+.+++.+
T Consensus 144 e~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~--~IPVV~IAnGGI~TpedA~~~le~ 221 (291)
T 3o07_A 144 EAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG--KLPVVNFAAGGVATPADAALLMQL 221 (291)
T ss_dssp CTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT--SCSSCEEBCSSCCSHHHHHHHHHT
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHcc--CCCEEEecCCCCCCHHHHHHHHHh
Confidence 43321 2 10 134678899988876 6888 569999999999999999
Q ss_pred CCCEEEEchHHHH
Q 018919 281 GASGIFIGRPVVY 293 (349)
Q Consensus 281 GA~~V~ig~~~l~ 293 (349)
|||+|+|||+++.
T Consensus 222 GaDGVmVGrAI~~ 234 (291)
T 3o07_A 222 GCDGVFVGSGIFK 234 (291)
T ss_dssp TCSCEEECGGGGG
T ss_pred CCCEEEEchHHhC
Confidence 9999999998764
No 86
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.98 E-value=3.8e-09 Score=102.06 Aligned_cols=139 Identities=8% Similarity=-0.023 Sum_probs=93.6
Q ss_pred HHHHHHH-HcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCccc---ccCC--C-CCCch-HHHHHHHHHhcC-CcEEEE
Q 018919 140 QLVRRAE-RAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLK---NFQG--L-DLGKM-DEDVKWLQTITK-LPILVK 210 (349)
Q Consensus 140 ~~~~~~~-~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~---~~~~--~-~~~~~-~~~i~~i~~~~~-~pv~vK 210 (349)
+.++++. ++|+|+|+||..|.. +-++|..|.. ..+ ...+ + ....+ .+.++.+|+.++ -||.+|
T Consensus 178 ~AA~~a~~~aGfDgVEih~a~GY-------Ll~QFlsp~~-N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vR 249 (379)
T 3aty_A 178 EGAKNAIFKAGFDGVEIHGANGY-------LLDAFFRESS-NKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLR 249 (379)
T ss_dssp HHHHHHHHTSCCSEEEEEECTTS-------HHHHHHSTTT-CCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCcCch-------HHhhccCCCC-CccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4556778 899999999987621 1122222210 001 0001 0 01234 677999999885 489999
Q ss_pred EecC---------------HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHH
Q 018919 211 GVLT---------------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVF 275 (349)
Q Consensus 211 ~v~~---------------~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~ 275 (349)
+... .+.++.+.++|+|+|.+++.+... ...+ .+ +.++++.+ ++|||+.||| +++++.
T Consensus 250 is~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--~~~~-~~-~~~ir~~~--~iPvi~~G~i-t~~~a~ 322 (379)
T 3aty_A 250 ISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--QQIG-DV-VAWVRGSY--SGVKISNLRY-DFEEAD 322 (379)
T ss_dssp ECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--CCCC-CH-HHHHHTTC--CSCEEEESSC-CHHHHH
T ss_pred ECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--CCcc-HH-HHHHHHHC--CCcEEEECCC-CHHHHH
Confidence 7642 234677889999999997632111 0111 14 66677666 7999999999 999999
Q ss_pred HHHHhC-CCEEEEchHHHH
Q 018919 276 KALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 276 kal~~G-A~~V~ig~~~l~ 293 (349)
++|+.| ||+|++||+++.
T Consensus 323 ~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 323 QQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp HHHHTTSCSEEEESHHHHH
T ss_pred HHHHcCCCeEEEecHHHHh
Confidence 999988 999999999985
No 87
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.93 E-value=8.5e-09 Score=94.99 Aligned_cols=180 Identities=18% Similarity=0.174 Sum_probs=114.4
Q ss_pred ecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhC-C-CceEEEEeecCC----h--hHHHH
Q 018919 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTG-P-GIRFFQLYVYKD----R--NVVAQ 140 (349)
Q Consensus 69 ~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~-~-~~~~~Ql~~~~~----~--~~~~~ 140 (349)
.+..|+.++||.... + -..+++++.+.|+..++.+.. .++.+.+.. . .+..+|+....+ . +...+
T Consensus 31 ~id~~~~l~p~~~~~--~---~~~~~~~~~~~g~~~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~ 103 (273)
T 2qjg_A 31 PMDHGVSNGPIKGLI--D---IRKTVNDVAEGGANAVLLHKG--IVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIVT 103 (273)
T ss_dssp ECCHHHHHCSCTTSS--S---HHHHHHHHHHHTCSEEEECHH--HHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEECS
T ss_pred EcccccccCCCcchh--h---HHHHHHHHHhcCCCEEEeCHH--HHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHHH
Confidence 456677888885432 1 237889999999988764220 011111111 1 245567654321 1 11245
Q ss_pred HHHHHHHcCCCEE--EEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchH---HHHHHHHHhcCCcEEEEEe---
Q 018919 141 LVRRAERAGFKAI--ALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMD---EDVKWLQTITKLPILVKGV--- 212 (349)
Q Consensus 141 ~~~~~~~~G~~~i--~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~---~~i~~i~~~~~~pv~vK~v--- 212 (349)
.++++.+.|++.+ .++..++. ...+. +.+.++.+.+++|+++...
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~---------------------------~~~~~~~~~~v~~~~~~~g~~viv~~~~~G 156 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDE---------------------------DWEAYRDLGMIAETCEYWGMPLIAMMYPRG 156 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTT---------------------------HHHHHHHHHHHHHHHHHHTCCEEEEEEECS
T ss_pred HHHHHHHcCCCEEEEEEecCCCC---------------------------HHHHHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 6778889999999 44443320 00112 2344444456999998752
Q ss_pred ------cCH---HHH-HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCC--HHH----HHH
Q 018919 213 ------LTA---EDA-RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR--GTD----VFK 276 (349)
Q Consensus 213 ------~~~---~~a-~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~--~~d----v~k 276 (349)
.+. +++ +.+.++|+|+|.++.. ..++.+.++++.+ ++||++.|||++ .+| +.+
T Consensus 157 ~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~~---------~~~~~l~~i~~~~--~ipvva~GGi~~~~~~~~~~~~~~ 225 (273)
T 2qjg_A 157 KHIQNERDPELVAHAARLGAELGADIVKTSYT---------GDIDSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQMIKD 225 (273)
T ss_dssp TTCSCTTCHHHHHHHHHHHHHTTCSEEEECCC---------SSHHHHHHHHHHC--SSCEEEECCSCCSSHHHHHHHHHH
T ss_pred cccCCCCCHhHHHHHHHHHHHcCCCEEEECCC---------CCHHHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHHHH
Confidence 233 344 8899999999998631 2467788888776 799999999995 778 555
Q ss_pred HHHhCCCEEEEchHHHH
Q 018919 277 ALALGASGIFIGRPVVY 293 (349)
Q Consensus 277 al~~GA~~V~ig~~~l~ 293 (349)
++.+||++|.+||.++.
T Consensus 226 ~~~~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 226 AMEAGAAGVAVGRNIFQ 242 (273)
T ss_dssp HHHHTCSEEECCHHHHT
T ss_pred HHHcCCcEEEeeHHhhC
Confidence 66899999999999874
No 88
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.92 E-value=7.9e-08 Score=88.56 Aligned_cols=172 Identities=16% Similarity=0.156 Sum_probs=107.0
Q ss_pred HHHHHHHHHcCCeEEecCCCCCCHHHHHhhCC--CceEEEE--eec--CChhHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 018919 91 YATARAASAAGTIMTLSSWSTSSVEEVASTGP--GIRFFQL--YVY--KDRNVVAQLVRRAERAGFKAIALTVDTPRLGR 164 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~--~~~~~Ql--~~~--~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~ 164 (349)
..+.+.|.+.|+..+.- .+.-+....+... +....-+ |+. ...+.-...++.+.+.|++.|.+.+|...
T Consensus 77 ~~lc~eA~~~g~aaVCV--~P~~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~--- 151 (288)
T 3oa3_A 77 DVLCAEAKEYGFATVCV--RPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPW--- 151 (288)
T ss_dssp HHHHHHHHHHTCSEEEE--CGGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHH---
T ss_pred HHHHHHHHhcCCcEEEE--CHHHHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhh---
Confidence 36788888888775431 1222333333322 2221111 221 23344455677888899999987776310
Q ss_pred hhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-----cCHHH----HHHHHHcCCCEEEEecC
Q 018919 165 READIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNH 234 (349)
Q Consensus 165 r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v-----~~~~~----a~~a~~~G~d~I~v~~~ 234 (349)
+. . .+-+. .++|+.+++..+-| .+|.+ ++.++ ++.+.++|+|+|..|.
T Consensus 152 ----lk------------~----g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTST- 209 (288)
T 3oa3_A 152 ----LS------------E----KRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAGADYVKTST- 209 (288)
T ss_dssp ----HH------------T----TCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCC-
T ss_pred ----hc------------C----CcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCC-
Confidence 00 0 01223 57799999887767 47876 35555 6778899999999983
Q ss_pred CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 235 GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 235 gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
|.......+.....+.++.+..+.+++|.++|||++.+|+++++++||+.++..+
T Consensus 210 Gf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 210 GFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp SSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 3211111233455555555444568999999999999999999999999665544
No 89
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.91 E-value=2.6e-08 Score=88.29 Aligned_cols=115 Identities=17% Similarity=0.183 Sum_probs=81.0
Q ss_pred HHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 018919 194 EDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 273 (349)
Q Consensus 194 ~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d 273 (349)
+.++. ++..+.++++. +.++++++.+.+.|+|.|.+... .+..++.+.++++.++.++||+++|||. .++
T Consensus 92 ~~~~~-~~~~g~~~~~g-~~t~~e~~~a~~~G~d~v~v~~t-------~~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~ 161 (212)
T 2v82_A 92 EVIRR-AVGYGMTVCPG-CATATEAFTALEAGAQALKIFPS-------SAFGPQYIKALKAVLPSDIAVFAVGGVT-PEN 161 (212)
T ss_dssp HHHHH-HHHTTCEEECE-ECSHHHHHHHHHTTCSEEEETTH-------HHHCHHHHHHHHTTSCTTCEEEEESSCC-TTT
T ss_pred HHHHH-HHHcCCCEEee-cCCHHHHHHHHHCCCCEEEEecC-------CCCCHHHHHHHHHhccCCCeEEEeCCCC-HHH
Confidence 44444 44467787765 78999999999999999987321 1234566777766553259999999997 899
Q ss_pred HHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 018919 274 VFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMAL 320 (349)
Q Consensus 274 v~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~ 320 (349)
+.+++++||++|.+|++++.+. +..+...+.++.+++.++...++
T Consensus 162 i~~~~~~Ga~gv~vGsai~~~~--~~~~d~~~~~~~l~~~~~~~~~~ 206 (212)
T 2v82_A 162 LAQWIDAGCAGAGLGSDLYRAG--QSVERTAQQAAAFVKAYREAVQL 206 (212)
T ss_dssp HHHHHHHTCSEEEECTTTCCTT--CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEChHHhCCC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999986420 01234555566666655555443
No 90
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.87 E-value=6e-08 Score=86.51 Aligned_cols=94 Identities=18% Similarity=0.156 Sum_probs=68.3
Q ss_pred HHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC-CCC-chhhHHHHHHHHHHhcCCCcEEEecCCCCH
Q 018919 194 EDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ-LDY-VPATIMALEEVVKATQGRIPVFLDGGVRRG 271 (349)
Q Consensus 194 ~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~-~~~-~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 271 (349)
+.+++++. +..+.+ .+.++++++.+.+.|+|+|.+++..+++ ..+ .+..++.+.++++.+ ++||++.||| ++
T Consensus 102 ~~~~~~~~--~~~ig~-sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~ 175 (221)
T 1yad_A 102 KQIRARFP--HLHIGR-SVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TP 175 (221)
T ss_dssp HHHHHHCT--TCEEEE-EECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CG
T ss_pred HHHHHHCC--CCEEEE-EcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CH
Confidence 34444432 444444 3568999999999999999986532222 111 133577788877766 7999999999 99
Q ss_pred HHHHHHHHhCCCEEEEchHHHH
Q 018919 272 TDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 272 ~dv~kal~~GA~~V~ig~~~l~ 293 (349)
+++.+++++||++|.+|+.++.
T Consensus 176 ~nv~~~~~~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 176 DRLRDVKQAGADGIAVMSGIFS 197 (221)
T ss_dssp GGHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEhHHhhC
Confidence 9999999999999999999874
No 91
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.86 E-value=2.4e-07 Score=83.95 Aligned_cols=197 Identities=14% Similarity=0.058 Sum_probs=113.2
Q ss_pred eeEcCeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCH-----HHHHhhCCCceEEEE--eecCCh
Q 018919 63 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSV-----EEVASTGPGIRFFQL--YVYKDR 135 (349)
Q Consensus 63 ~~l~g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~-----e~i~~~~~~~~~~Ql--~~~~~~ 135 (349)
.+|.|++|.+.+++..=-+ .+ ...+.++....|+-.+.-......+ +.+.+..+ .++... .+.++.
T Consensus 4 l~i~~~~~~srl~~Gtgky---~~---~~~~~~ai~asg~eivtva~rR~~~~~~~~~~~~~~i~-~~~~lpntaG~~ta 76 (268)
T 2htm_A 4 WKVGPVELKSRLILGSGKY---ED---FGVMREAIAAAKAEVVTVSVRRVELKAPGHVGLLEALE-GVRLLPNTAGARTA 76 (268)
T ss_dssp EEETTEEECCSEEEECSSC---SC---HHHHHHHHHHTTCSEEEEEEEECC-------CHHHHTT-TSEEEEBCTTCCSH
T ss_pred eEECCEEeecceEEecCCC---CC---HHHHHHHHHHhCCCEEEEEccccCCCCCCcccHHHHHh-hhhccCcccCCCCH
Confidence 6789999999999876222 12 2357778888888755311111111 22333223 112211 112333
Q ss_pred hHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc--CCcEEEEEe
Q 018919 136 NVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT--KLPILVKGV 212 (349)
Q Consensus 136 ~~~~~~~~~~~~~-G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~--~~pv~vK~v 212 (349)
+.....++.+.+. |-+.+-+.+=.- + + ...++..+.++..+... +..++-...
T Consensus 77 eeAv~~a~lare~~gt~~iKlEvi~d---------------~-~--------~l~pD~~~tv~aa~~L~k~Gf~Vlpy~~ 132 (268)
T 2htm_A 77 EEAVRLARLGRLLTGERWVKLEVIPD---------------P-T--------YLLPDPLETLKAAERLIEEDFLVLPYMG 132 (268)
T ss_dssp HHHHHHHHHHHHHHCCSEEBCCCCSC---------------T-T--------TTCCCHHHHHHHHHHHHHTTCEECCEEC
T ss_pred HHHHHHHHhhhHhcCcceeeeeeccC---------------c-c--------ccCcCHHHHHHHHHHHHHCCCEEeeccC
Confidence 4333333334433 555543222100 0 0 11233334444444322 444432335
Q ss_pred cCHHHHHHHHHcCCCEEEEecC-CCCCCCCchhhHHHHHHHHHHhcCC-CcEEEecCCCCHHHHHHHHHhCCCEEEEchH
Q 018919 213 LTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGR-IPVFLDGGVRRGTDVFKALALGASGIFIGRP 290 (349)
Q Consensus 213 ~~~~~a~~a~~~G~d~I~v~~~-gg~~~~~~~~~~~~l~~i~~~~~~~-ipvia~GGI~~~~dv~kal~~GA~~V~ig~~ 290 (349)
.+++.++++.++|+++|.--+. -|+ ..|..+.+.+..+++.. .+ +|||++|||.+++|+.+++++|||+|++|++
T Consensus 133 ~D~~~ak~l~~~G~~aVmPlg~pIGs--G~Gi~~~~~L~~i~~~~-~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSA 209 (268)
T 2htm_A 133 PDLVLAKRLAALGTATVMPLAAPIGS--GWGVRTRALLELFAREK-ASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTA 209 (268)
T ss_dssp SCHHHHHHHHHHTCSCBEEBSSSTTT--CCCSTTHHHHHHHHHTT-TTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHH
T ss_pred CCHHHHHHHHhcCCCEEEecCccCcC--CcccCCHHHHHHHHHhc-CCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 7899999999999999965222 121 12344566677777622 26 9999999999999999999999999999999
Q ss_pred HHH
Q 018919 291 VVY 293 (349)
Q Consensus 291 ~l~ 293 (349)
+..
T Consensus 210 I~~ 212 (268)
T 2htm_A 210 IAE 212 (268)
T ss_dssp HHT
T ss_pred HhC
Confidence 874
No 92
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.86 E-value=9e-09 Score=93.61 Aligned_cols=152 Identities=13% Similarity=0.125 Sum_probs=96.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccc-----cCCCCCCch-HHHHHHHHHhcCCc
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKN-----FQGLDLGKM-DEDVKWLQTITKLP 206 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~-----~~~~~~~~~-~~~i~~i~~~~~~p 206 (349)
.+.+.+.+.++.+.++|+|.|+|.+....+ +-+|..+.. ...-.+.+. ++.++++|+. +|
T Consensus 25 P~~~~t~~~~~~l~~~GaD~iElGiPfSDP------------~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~P 90 (252)
T 3tha_A 25 PNLQTSEAFLQRLDQSPIDILELGVAYSDP------------IADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KA 90 (252)
T ss_dssp SCHHHHHHHHHTGGGSSCSEEEEECCCSCC------------CSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCC------------CCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CC
Confidence 466788999999999999999988743211 001111100 000012233 6777777754 79
Q ss_pred EEEEEecCH-------HHHHHHHHcCCCEEEEec---------------CCCC----------------------C----
Q 018919 207 ILVKGVLTA-------EDARIAVQAGAAGIIVSN---------------HGAR----------------------Q---- 238 (349)
Q Consensus 207 v~vK~v~~~-------~~a~~a~~~G~d~I~v~~---------------~gg~----------------------~---- 238 (349)
+++-+..|+ ..++.|.++|+|++++-. ||-. .
T Consensus 91 ivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~ 170 (252)
T 3tha_A 91 LVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYL 170 (252)
T ss_dssp EEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEE
T ss_pred EEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEE
Confidence 988765443 457889999999998741 1110 0
Q ss_pred --C--CCchh-h-----HHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHH
Q 018919 239 --L--DYVPA-T-----IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 301 (349)
Q Consensus 239 --~--~~~~~-~-----~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~ 301 (349)
. -.|.. . .+.+.++++.. ++||++.+||++++++.++.. +||+|.||++++..+...+.+
T Consensus 171 Vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk~i~~~~~~ 240 (252)
T 3tha_A 171 LASIGITGTKSVEEAILQDKVKEIRSFT--NLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVKCFKQGNLD 240 (252)
T ss_dssp ECCSCSSSCSHHHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHHHTTSSCHH
T ss_pred EecCCCCCcccCCCHHHHHHHHHHHHhc--CCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHHHHHhcCHH
Confidence 0 01211 1 23444444443 699999999999999976654 799999999999876554443
No 93
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.85 E-value=5.4e-08 Score=88.40 Aligned_cols=76 Identities=14% Similarity=0.177 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.+.|++.|.+++........+ ..++.+.++++.+ ++||+++|||++++|+.+++++||++|++|++++.
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 4668999999999998864221111122 3578888887765 79999999999999999999999999999999985
No 94
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.85 E-value=4.9e-08 Score=95.90 Aligned_cols=190 Identities=14% Similarity=0.113 Sum_probs=126.3
Q ss_pred HHHHHHHHHcCCeEEecC--------CCCCCHHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 91 YATARAASAAGTIMTLSS--------WSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~--------~~~~~~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~ 162 (349)
..+|++..+. +. ++|- .+...+.++++...-|.+.+=|. .++- .+..+..+|++++.+....
T Consensus 71 ~~iA~~y~~~-A~-~IsvLTd~~~F~gs~~dL~~vr~~v~lPvLrKDFI-~d~~----Qi~ea~~~GAD~ILLi~a~--- 140 (452)
T 1pii_A 71 ARIAAIYKHY-AS-AISVLTDEKYFQGSFNFLPIVSQIAPQPILCKDFI-IDPY----QIYLARYYQADACLLMLSV--- 140 (452)
T ss_dssp HHHHHHHTTT-CS-EEEEECCSTTTCCCTTHHHHHHHHCCSCEEEESCC-CSHH----HHHHHHHTTCSEEEEETTT---
T ss_pred HHHHHHHHhh-Cc-EEEEEecccccCCCHHHHHHHHHhcCCCeEEEecc-CCHH----HHHHHHHcCCCEEEEEccc---
Confidence 4677777665 43 4442 22233445555444344444343 2322 3455889999999876532
Q ss_pred CchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCC
Q 018919 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDY 241 (349)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~ 241 (349)
.+... .+.++..++ .++.+++ .+.+.+++++|.++|+|.|-+.|.+-+.
T Consensus 141 -------------------------l~~~~l~~l~~~a~~-lgm~~Lv-Evh~~eE~~~A~~lga~iIGinnr~L~t--- 190 (452)
T 1pii_A 141 -------------------------LDDDQYRQLAAVAHS-LEMGVLT-EVSNEEEQERAIALGAKVVGINNRDLRD--- 190 (452)
T ss_dssp -------------------------CCHHHHHHHHHHHHH-TTCEEEE-EECSHHHHHHHHHTTCSEEEEESEETTT---
T ss_pred -------------------------CCHHHHHHHHHHHHH-cCCeEEE-EeCCHHHHHHHHHCCCCEEEEeCCCCCC---
Confidence 01111 234555554 5887776 6789999999999999999988765432
Q ss_pred chhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHc
Q 018919 242 VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALS 321 (349)
Q Consensus 242 ~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~ 321 (349)
-...++...++.+.++.++++|+.|||++++|+.++..+ |++|.||++++.. +.....++.+.. ...+.|
T Consensus 191 ~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~------~d~~~~~~~l~~---~~~KIC 260 (452)
T 1pii_A 191 LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAH------DDLHAAVRRVLL---GENKVC 260 (452)
T ss_dssp TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTC------SCHHHHHHHHHH---CSCEEC
T ss_pred CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCC------cCHHHHHHHHHH---Hhcccc
Confidence 233466666777777667999999999999999999999 9999999999862 222334444432 245688
Q ss_pred CCCChhhhc
Q 018919 322 GCRSLKEIT 330 (349)
Q Consensus 322 G~~~i~~l~ 330 (349)
|.++.+|+.
T Consensus 261 Git~~eda~ 269 (452)
T 1pii_A 261 GLTRGQDAK 269 (452)
T ss_dssp CCCSHHHHH
T ss_pred CCCcHHHHH
Confidence 999888775
No 95
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.84 E-value=6.8e-09 Score=94.32 Aligned_cols=130 Identities=23% Similarity=0.325 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHcCCCEEEEe-cCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEE-ecC
Q 018919 137 VVAQLVRRAERAGFKAIALT-VDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKG-VLT 214 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~-~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~-v~~ 214 (349)
...+.++.+++.|++.|.++ ++.... .....++.++++++.+++||++.+ +.+
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~-------------------------~~~~~~~~i~~i~~~~~ipvi~~Ggi~~ 90 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGT-------------------------KSGYDTEMIRFVRPLTTLPIIASGGAGK 90 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTC-------------------------SSCCCHHHHHHHGGGCCSCEEEESCCCS
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccC-------------------------CCcccHHHHHHHHHhCCCCEEEeCCCCC
Confidence 35678899999999998763 221100 011126889999998999998875 578
Q ss_pred HHHHHHHHHcCCCEEEEecC---------------CCC----CCC--------------------------------Cc-
Q 018919 215 AEDARIAVQAGAAGIIVSNH---------------GAR----QLD--------------------------------YV- 242 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~---------------gg~----~~~--------------------------------~~- 242 (349)
+++++.+.+.|||+|.+... |.. .++ .|
T Consensus 91 ~~~~~~~l~~Gad~V~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~ 170 (247)
T 3tdn_A 91 MEHFLEAFLRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGA 170 (247)
T ss_dssp HHHHHHHHHTTCSEECCSHHHHHCTHHHHHHHHHHC--------------------------------------------
T ss_pred HHHHHHHHHcCCCeeehhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCC
Confidence 89999999999999887510 100 000 00
Q ss_pred ---------------hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 243 ---------------PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 243 ---------------~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.++++.+ ++|||+.|||++++|+.+++.+|||+|++||+++.
T Consensus 171 ~~i~~t~~~~~g~~~g~~~~~~~~i~~~~--~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 171 GEILLTSIDRDGTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp ------------------------------------------------------------------
T ss_pred CEEEEecccCCCCcCCCCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 01234444454444 79999999999999999999999999999999875
No 96
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.83 E-value=2.9e-08 Score=90.72 Aligned_cols=128 Identities=17% Similarity=0.222 Sum_probs=88.8
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe-cCHH
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV-LTAE 216 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v-~~~~ 216 (349)
..+.++..++.|+++|-+ ++-+. .| .. ..++++.+++.+++||..|.. .+..
T Consensus 67 p~~~A~~~~~~GA~~isv-lt~~~----------~f---------------~G-~~~~l~~i~~~v~lPvl~kdfI~d~~ 119 (254)
T 1vc4_A 67 PVEAALAYARGGARAVSV-LTEPH----------RF---------------GG-SLLDLKRVREAVDLPLLRKDFVVDPF 119 (254)
T ss_dssp HHHHHHHHHHTTCSEEEE-ECCCS----------SS---------------CC-CHHHHHHHHHHCCSCEEEESCCCSHH
T ss_pred HHHHHHHHHHcCCCEEEE-ecchh----------hh---------------cc-CHHHHHHHHHhcCCCEEECCcCCCHH
Confidence 457788889999999865 22110 00 00 146788888888889888874 5666
Q ss_pred HHHHHHHcCCCEEEEecC----------------CCC---------------------------CCCCchhhHHHHHHHH
Q 018919 217 DARIAVQAGAAGIIVSNH----------------GAR---------------------------QLDYVPATIMALEEVV 253 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~----------------gg~---------------------------~~~~~~~~~~~l~~i~ 253 (349)
++..+.++|||+|.+... |-. .+..-...++.+.++.
T Consensus 120 qi~~a~~~GAD~VlL~~~~l~~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~ 199 (254)
T 1vc4_A 120 MLEEARAFGASAALLIVALLGELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRDLATLHINLETAPRLG 199 (254)
T ss_dssp HHHHHHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHH
T ss_pred HHHHHHHcCCCEEEECccchHHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHH
Confidence 788888888888887521 000 0001122334455555
Q ss_pred HHhcC---CCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 254 KATQG---RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 254 ~~~~~---~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
+.++. ++|+++.|||++++|+.++.. ||++|.||++++.
T Consensus 200 ~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~ 241 (254)
T 1vc4_A 200 RLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMR 241 (254)
T ss_dssp HHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHT
T ss_pred HhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcC
Confidence 55543 689999999999999999999 9999999999985
No 97
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.82 E-value=1.1e-07 Score=86.64 Aligned_cols=162 Identities=13% Similarity=0.060 Sum_probs=107.5
Q ss_pred HHHHHHHHHcCCeEEecC---C--CCCCHHHHHh---hCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 91 YATARAASAAGTIMTLSS---W--STSSVEEVAS---TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~---~--~~~~~e~i~~---~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~ 162 (349)
..+|+++.+. .. ++|- . -..+++++.+ ...-|.+.|=|. .++- .+..+..+|++++.+....
T Consensus 64 ~~iA~~y~~~-A~-~IsVlTd~~~F~gs~~dL~~ir~~v~lPvLrKDfi-~~~~----qi~ea~~~GAD~ilLi~a~--- 133 (251)
T 1i4n_A 64 EDFIRMYDEL-AD-AISILTEKHYFKGDPAFVRAARNLTCRPILAKDFY-IDTV----QVKLASSVGADAILIIARI--- 133 (251)
T ss_dssp HHHHHHHHHH-CS-EEEEECCCSSSCCCTHHHHHHHTTCCSCEEEECCC-CSTH----HHHHHHHTTCSEEEEEGGG---
T ss_pred HHHHHHHHHh-CC-ceEEEecccccCCCHHHHHHHHHhCCCCEEEeeCC-CCHH----HHHHHHHcCCCEEEEeccc---
Confidence 4688887776 43 3432 1 1124555543 333344444444 2322 2445889999999876532
Q ss_pred CchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHc-CCCEEEEecCCCCCCC
Q 018919 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQA-GAAGIIVSNHGARQLD 240 (349)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~-G~d~I~v~~~gg~~~~ 240 (349)
.+... .+.++..++ .++.+++ .+.+.++++++.++ |+|.|-+.|.+-+..
T Consensus 134 -------------------------l~~~~l~~l~~~a~~-lGl~~lv-Ev~~~eE~~~A~~l~g~~iIGinnr~l~t~- 185 (251)
T 1i4n_A 134 -------------------------LTAEQIKEIYEAAEE-LGMDSLV-EVHSREDLEKVFSVIRPKIIGINTRDLDTF- 185 (251)
T ss_dssp -------------------------SCHHHHHHHHHHHHT-TTCEEEE-EECSHHHHHHHHTTCCCSEEEEECBCTTTC-
T ss_pred -------------------------CCHHHHHHHHHHHHH-cCCeEEE-EeCCHHHHHHHHhcCCCCEEEEeCcccccC-
Confidence 01111 233444444 5877776 57899999999999 999999987653322
Q ss_pred CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 241 YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 241 ~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
...++...++.+.++.++++|+.|||++++|+.++..+ |++|.||++++.
T Consensus 186 --~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aimr 235 (251)
T 1i4n_A 186 --EIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMK 235 (251)
T ss_dssp --CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHHH
T ss_pred --CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHcC
Confidence 22344555666666667899999999999999999999 999999999986
No 98
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.80 E-value=8.5e-08 Score=86.18 Aligned_cols=153 Identities=14% Similarity=0.090 Sum_probs=102.7
Q ss_pred EeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccc-------------cC-CCCCCch-H
Q 018919 129 LYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKN-------------FQ-GLDLGKM-D 193 (349)
Q Consensus 129 l~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~-------------~~-~~~~~~~-~ 193 (349)
+....+++...+.++.+.+.|++.+++++.+|..-.-.+.++..+... .++.-. +. ....|.+ .
T Consensus 39 Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~-~iGaGTVlt~~~a~~Ai~AGA~fIvsP~~~~ 117 (232)
T 4e38_A 39 VIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEM-LIGAGTILNGEQALAAKEAGATFVVSPGFNP 117 (232)
T ss_dssp EECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTC-EEEEECCCSHHHHHHHHHHTCSEEECSSCCH
T ss_pred EEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCC-EEeECCcCCHHHHHHHHHcCCCEEEeCCCCH
Confidence 344456777777788888888888888887764322234444444100 000000 00 0334555 5
Q ss_pred HHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 018919 194 EDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 273 (349)
Q Consensus 194 ~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d 273 (349)
+.++..++ .++|++. ++.|+.++.+|.++|+|.|.++..+ ..+| .+.|+.++..+ .++|+++.|||. .+.
T Consensus 118 ~vi~~~~~-~gi~~ip-Gv~TptEi~~A~~~Gad~vK~FPa~---~~gG---~~~lkal~~p~-p~ip~~ptGGI~-~~n 187 (232)
T 4e38_A 118 NTVRACQE-IGIDIVP-GVNNPSTVEAALEMGLTTLKFFPAE---ASGG---ISMVKSLVGPY-GDIRLMPTGGIT-PSN 187 (232)
T ss_dssp HHHHHHHH-HTCEEEC-EECSHHHHHHHHHTTCCEEEECSTT---TTTH---HHHHHHHHTTC-TTCEEEEBSSCC-TTT
T ss_pred HHHHHHHH-cCCCEEc-CCCCHHHHHHHHHcCCCEEEECcCc---cccC---HHHHHHHHHHh-cCCCeeeEcCCC-HHH
Confidence 56666555 5999887 6889999999999999999995431 1122 35666666555 379999999995 799
Q ss_pred HHHHHHhCCCEEEEchHHH
Q 018919 274 VFKALALGASGIFIGRPVV 292 (349)
Q Consensus 274 v~kal~~GA~~V~ig~~~l 292 (349)
+.+++++||.++.+|+.+.
T Consensus 188 ~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 188 IDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp HHHHHTSTTBCCEEECGGG
T ss_pred HHHHHHCCCeEEEECchhc
Confidence 9999999999999998765
No 99
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.79 E-value=1e-07 Score=89.02 Aligned_cols=45 Identities=38% Similarity=0.626 Sum_probs=39.0
Q ss_pred HHHHHHHHHhcCCCcE--EEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 247 MALEEVVKATQGRIPV--FLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 247 ~~l~~i~~~~~~~ipv--ia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
+.+.++.+.. ++|| ++.|||.+++|+.+++++|||+|+||++++.
T Consensus 230 ell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~ 276 (330)
T 2yzr_A 230 EVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK 276 (330)
T ss_dssp HHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred HHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhc
Confidence 5666666654 7888 6999999999999999999999999999984
No 100
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.79 E-value=3e-08 Score=89.57 Aligned_cols=76 Identities=20% Similarity=0.225 Sum_probs=61.3
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh---CCCEEEEchHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIGRPV 291 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~---GA~~V~ig~~~ 291 (349)
.+.++.+.++|++.|.+++....+...+ ..++.+.++++.+ ++||+++|||++++|+.+++++ ||++|++||++
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al 228 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGTLGG-PNLDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKAL 228 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTTTSC-CCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred HHHHHHHHhCCCCEEEEEecCCccccCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHH
Confidence 5778999999999999865321111123 3678888887765 7999999999999999999998 99999999998
Q ss_pred HH
Q 018919 292 VY 293 (349)
Q Consensus 292 l~ 293 (349)
+.
T Consensus 229 ~~ 230 (244)
T 2y88_A 229 YA 230 (244)
T ss_dssp HT
T ss_pred HC
Confidence 75
No 101
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=98.78 E-value=3.2e-07 Score=87.95 Aligned_cols=145 Identities=15% Similarity=0.138 Sum_probs=88.9
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccc--cCC-CCC-Cch-HHHHHHHHHhcC-CcEEEEE
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKN--FQG-LDL-GKM-DEDVKWLQTITK-LPILVKG 211 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~--~~~-~~~-~~~-~~~i~~i~~~~~-~pv~vK~ 211 (349)
..+.+++++++|+|+|+||... |+ +-++|..|. ...+. ..| +.+ ..| .+.++.+|+.++ -+|.+|.
T Consensus 154 F~~AA~rA~~AGFDgVEIH~ah---GY----Ll~QFLSp~-tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRl 225 (358)
T 4a3u_A 154 YEKAARHALKAGFDGVQIHAAN---GY----LIDEFIRDS-TNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRL 225 (358)
T ss_dssp HHHHHHHHHHTTCSEEEEEECT---TS----HHHHHHSTT-TCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHcCCCeEeecccC---CC----cHHhceecc-cCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEe
Confidence 3466778889999999999854 22 223333331 01110 111 111 134 678999999883 4688887
Q ss_pred ecC-----------H----HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH
Q 018919 212 VLT-----------A----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 276 (349)
Q Consensus 212 v~~-----------~----~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k 276 (349)
..+ . +.++.+.+.|++.+.++..................++++.. ..||+ .||+.+++++.+
T Consensus 226 s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~--~~~v~-~~g~~~~~~ae~ 302 (358)
T 4a3u_A 226 SPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVF--KPPLV-LNQDYTFETAQA 302 (358)
T ss_dssp CCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHC--CSCEE-EESSCCHHHHHH
T ss_pred ccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhc--CCcEE-EeCCCCHHHHHH
Confidence 521 1 23566788999999987532111111000112234455554 45555 678899999999
Q ss_pred HHHhC-CCEEEEchHHHH
Q 018919 277 ALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 277 al~~G-A~~V~ig~~~l~ 293 (349)
+|+.| ||+|.+||+++.
T Consensus 303 ~l~~G~aD~V~~gR~~la 320 (358)
T 4a3u_A 303 ALDSGVADAISFGRPFIG 320 (358)
T ss_dssp HHHHTSCSEEEESHHHHH
T ss_pred HHHcCCceEeHhhHHHHh
Confidence 99998 999999999985
No 102
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.77 E-value=2e-07 Score=82.36 Aligned_cols=185 Identities=12% Similarity=0.098 Sum_probs=111.5
Q ss_pred hhhHHHHHHHHHcCCeE-EecC-----CCCCCHHHHHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCC
Q 018919 88 EGEYATARAASAAGTIM-TLSS-----WSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (349)
Q Consensus 88 ~~~~~la~aa~~~G~~~-~~~~-----~~~~~~e~i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p 160 (349)
+....+++.+. .|+.. -++. .+...++++++..+ .+....+.. .+.. ...++.+.++|++.+.++...+
T Consensus 13 ~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~~~~~~~i~~~~~~-~~~~--~~~~~~~~~~Gad~v~v~~~~~ 88 (211)
T 3f4w_A 13 PEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKI-MDGG--HFESQLLFDAGADYVTVLGVTD 88 (211)
T ss_dssp HHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEE-CSCH--HHHHHHHHHTTCSEEEEETTSC
T ss_pred HHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHHhCCCCEEEEEEEe-ccch--HHHHHHHHhcCCCEEEEeCCCC
Confidence 34456666664 46554 2341 12223455665544 333333322 2222 2347888999999998764211
Q ss_pred CCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEE--ecCH-HHHHHHHHcCCCEEEEecCCC
Q 018919 161 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKG--VLTA-EDARIAVQAGAAGIIVSNHGA 236 (349)
Q Consensus 161 ~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~--v~~~-~~a~~a~~~G~d~I~v~~~gg 236 (349)
.+. .+.++.+++ .++++++-. ..++ +.++.+.+.|+|.|.+.. |.
T Consensus 89 -----------------------------~~~~~~~~~~~~~-~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~-g~ 137 (211)
T 3f4w_A 89 -----------------------------VLTIQSCIRAAKE-AGKQVVVDMICVDDLPARVRLLEEAGADMLAVHT-GT 137 (211)
T ss_dssp -----------------------------HHHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEEC-CH
T ss_pred -----------------------------hhHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcC-CC
Confidence 011 233555554 477777532 2343 668999999999998752 21
Q ss_pred CCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018919 237 RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 315 (349)
Q Consensus 237 ~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~ 315 (349)
.....++..++.+.++++.++ ++||+++|||+ ++++.+++++|||+|.+||+++.+ . ...+.++.++++++
T Consensus 138 ~g~~~~~~~~~~i~~l~~~~~-~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~~-----~-d~~~~~~~l~~~~~ 208 (211)
T 3f4w_A 138 DQQAAGRKPIDDLITMLKVRR-KARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITHA-----A-DPAGEARKISQVLL 208 (211)
T ss_dssp HHHHTTCCSHHHHHHHHHHCS-SCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHTC-----S-SHHHHHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHcC-CCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcCC-----C-CHHHHHHHHHHHHh
Confidence 100012235677888877653 69999999996 999999999999999999998742 1 22344555555443
No 103
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.77 E-value=7.5e-08 Score=86.62 Aligned_cols=169 Identities=20% Similarity=0.150 Sum_probs=105.8
Q ss_pred HHHHHHHHHcCCeEEecCCCCCCHHHHHhhC--CCceEEE-E-ee--cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 018919 91 YATARAASAAGTIMTLSSWSTSSVEEVASTG--PGIRFFQ-L-YV--YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGR 164 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~--~~~~~~Q-l-~~--~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~ 164 (349)
..+.+.|.++|+..+.- .+.-+....+.. .+....- + |+ ....+.-...++.+.+.|++.|.+.+|...
T Consensus 46 ~~lc~eA~~~~~~aVcV--~p~~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~--- 120 (239)
T 3ngj_A 46 RKLCSEAAEYKFASVCV--NPTWVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGM--- 120 (239)
T ss_dssp HHHHHHHHHHTCSEEEE--CGGGHHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHH---
T ss_pred HHHHHHHHhcCCcEEEE--CHHHHHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHH---
Confidence 36778888888775431 111222222211 1111111 1 22 223344456677888889999988876410
Q ss_pred hhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-----cCHHHH----HHHHHcCCCEEEEecC
Q 018919 165 READIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV-----LTAEDA----RIAVQAGAAGIIVSNH 234 (349)
Q Consensus 165 r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v-----~~~~~a----~~a~~~G~d~I~v~~~ 234 (349)
+. . .+.++ .++|+.+++..+- ..+|.+ ++.++. +.+.++|+|+|..|..
T Consensus 121 ----lk------------~----g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTG 179 (239)
T 3ngj_A 121 ----VK------------A----KKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTG 179 (239)
T ss_dssp ----HH------------T----TCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred ----hc------------c----ccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCC
Confidence 00 0 12233 5678888888753 256765 455554 4458999999999742
Q ss_pred CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 235 GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 235 gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
- ..+..+++.+..+++.++.+++|.++||||+.+|+++++++||+.++..+
T Consensus 180 f----~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 180 F----GTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGASRIGASA 230 (239)
T ss_dssp S----SSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEEEEEESC
T ss_pred C----CCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhcccceeccc
Confidence 1 12334566666666667678999999999999999999999999877655
No 104
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.77 E-value=5.2e-08 Score=88.43 Aligned_cols=76 Identities=21% Similarity=0.253 Sum_probs=62.6
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.+.|++.|.+++.+..+...++ .++.+.++++.+ ++||++.|||++++|+.+++++||++|++|++++.
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~ 230 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGY-DLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHF 230 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCC-CHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCC-CHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHc
Confidence 57789999999999988643221122233 588899988877 79999999999999999999999999999999985
No 105
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.76 E-value=9.5e-08 Score=86.17 Aligned_cols=76 Identities=21% Similarity=0.322 Sum_probs=60.9
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.+.|+|.|.+.+........+ ..++.+.++++.+ ++||+++|||++.+|+.+++++||++|++|++++.
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~-~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLG-YDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCc-CCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHc
Confidence 4778999999999999864321111112 3577888888776 79999999999999999999999999999999975
No 106
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.76 E-value=1.3e-07 Score=87.25 Aligned_cols=159 Identities=19% Similarity=0.206 Sum_probs=99.7
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCC---Cchh-----HHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcC
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRL---GRRE-----ADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITK 204 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~---g~r~-----~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~ 204 (349)
+.+.+.+.++.+.+. +|+|+|.+....+ |.-. +-+.++ ...+. .+.++++|+..+
T Consensus 28 ~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G---------------~~~~~~~~~v~~ir~~~~ 91 (271)
T 1ujp_A 28 SREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKG---------------MSVQGALELVREVRALTE 91 (271)
T ss_dssp CHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTT---------------CCHHHHHHHHHHHHHHCC
T ss_pred ChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcC---------------CCHHHHHHHHHHHHhcCC
Confidence 446677888888888 9999986532100 0000 001111 11122 577999999889
Q ss_pred CcEEEEEecC-------HHHHHHHHHcCCCEEEEecC---------------CC---------CC---------------
Q 018919 205 LPILVKGVLT-------AEDARIAVQAGAAGIIVSNH---------------GA---------RQ--------------- 238 (349)
Q Consensus 205 ~pv~vK~v~~-------~~~a~~a~~~G~d~I~v~~~---------------gg---------~~--------------- 238 (349)
+|+++-+..+ .+.++.|.++|+|++++-.- |- ..
T Consensus 92 ~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfi 171 (271)
T 1ujp_A 92 KPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFV 171 (271)
T ss_dssp SCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCE
T ss_pred CCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCE
Confidence 9998743322 25678899999998887421 10 00
Q ss_pred ----C--CCch------hhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHH
Q 018919 239 ----L--DYVP------ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRV 306 (349)
Q Consensus 239 ----~--~~~~------~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~ 306 (349)
. .+|. ...+.+.++++.. ++||++.|||++++++.++ .|||+|.||+++...... + + .
T Consensus 172 y~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~~~~-~-~----~ 241 (271)
T 1ujp_A 172 YAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRALEE-G-R----S 241 (271)
T ss_dssp EEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHHHHT-T-C----C
T ss_pred EEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcccch-H-H----H
Confidence 0 0011 1135666666554 7999999999999999885 999999999999976432 1 1 3
Q ss_pred HHHHHHHHHHHH
Q 018919 307 LEMLREEFELAM 318 (349)
Q Consensus 307 l~~l~~el~~~m 318 (349)
+..+.++++..+
T Consensus 242 ~~~fv~~l~~~~ 253 (271)
T 1ujp_A 242 LAPLLQEIRQGL 253 (271)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 445555555544
No 107
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.76 E-value=2.2e-07 Score=85.07 Aligned_cols=76 Identities=14% Similarity=0.177 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.+.|++.|.+++........+ ..++.+.++++.+ ++|||+.|||++++|+.+++.+||++|++|++++.
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 234 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHc
Confidence 4667999999999999864321111123 3578888887766 79999999999999999999999999999999875
No 108
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.73 E-value=5.6e-07 Score=80.86 Aligned_cols=157 Identities=18% Similarity=0.157 Sum_probs=108.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHh--cCCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTI--TKLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~--~~~pv~v 209 (349)
.|.....+.+++++++|++.+-+++--- .| +| +-.+ .+.++++|+. .++|+-+
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmDg-----------~F-vp------------n~~~G~~~v~~ir~~~~~~~~~dv 69 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMDG-----------HF-VP------------NITFGHPVVESLRKQLGQDPFFDM 69 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEBS-----------SS-SS------------CBCBCHHHHHHHHHHHCSSSCEEE
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecCC-----------Cc-Cc------------ccccCHHHHHHHHHhhCCCCcEEE
Confidence 5667778899999999999887655210 11 12 1123 5789999988 4789888
Q ss_pred EEe-cCH-HHHHHHHHcCCCEEEEecCCC------------------------CC----------CC-----------C-
Q 018919 210 KGV-LTA-EDARIAVQAGAAGIIVSNHGA------------------------RQ----------LD-----------Y- 241 (349)
Q Consensus 210 K~v-~~~-~~a~~a~~~G~d~I~v~~~gg------------------------~~----------~~-----------~- 241 (349)
+.. .++ ..++.+.++|+|.|++..... +. .| +
T Consensus 70 hLmv~~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 70 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp EEECSCGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTCS
T ss_pred EEEeCCHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCCC
Confidence 764 444 346778899999999963211 00 00 1
Q ss_pred ---chhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Q 018919 242 ---VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAM 318 (349)
Q Consensus 242 ---~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m 318 (349)
.+..++-+.++++.. .+++|.++|||+ .+.+.++.++|||.+.+||+++.+ +...+.++.++++++...
T Consensus 150 q~f~~~~l~ki~~lr~~~-~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a------~dp~~~~~~l~~~~~~~~ 221 (228)
T 3ovp_A 150 QKFMEDMMPKVHWLRTQF-PSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRS------EDPRSVINLLRNVCSEAA 221 (228)
T ss_dssp CCCCGGGHHHHHHHHHHC-TTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTC------SCHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHhc-CCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCC------CCHHHHHHHHHHHHHHHH
Confidence 134566677776654 368999999995 799999999999999999987631 223456677777777766
Q ss_pred HHc
Q 018919 319 ALS 321 (349)
Q Consensus 319 ~~~ 321 (349)
...
T Consensus 222 ~~~ 224 (228)
T 3ovp_A 222 QKR 224 (228)
T ss_dssp HHC
T ss_pred hhc
Confidence 543
No 109
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.73 E-value=5.1e-08 Score=88.20 Aligned_cols=74 Identities=24% Similarity=0.303 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCCEEEEecC--CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh---CCCEEEEch
Q 018919 215 AEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIGR 289 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~---GA~~V~ig~ 289 (349)
.+.++.+.+.|++.|.+++. ++. ..+ ..++.+.++++.+ ++||+++|||++++|+.+++++ ||++|++|+
T Consensus 149 ~e~~~~~~~~G~~~i~~~~~~~~~~--~~g-~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 149 YETLDRLNKEGCARYVVTDIAKDGT--LQG-PNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGK 223 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEEC---------C-CCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred HHHHHHHHhCCCCEEEEeccCcccc--cCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeH
Confidence 46679999999999988652 221 112 3678888888776 7999999999999999999998 999999999
Q ss_pred HHHH
Q 018919 290 PVVY 293 (349)
Q Consensus 290 ~~l~ 293 (349)
+++.
T Consensus 224 al~~ 227 (244)
T 1vzw_A 224 ALYA 227 (244)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9984
No 110
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.69 E-value=9.3e-08 Score=96.82 Aligned_cols=76 Identities=18% Similarity=0.118 Sum_probs=63.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-hCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~-~GA~~V~ig~~~l~ 293 (349)
.+.++.+.++|++.|++.+...-+...| +.++.+.++++.+ ++|||++|||++.+|+.+++. +||++|++||+|+.
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~ 531 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHR 531 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHc
Confidence 5889999999999999854211112234 3799999999887 899999999999999999998 89999999999975
No 111
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.67 E-value=1e-07 Score=86.13 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=61.7
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh-----C-CCEEEEch
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL-----G-ASGIFIGR 289 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~-----G-A~~V~ig~ 289 (349)
+.++.+.++|++.|.+++....+...+ +.++.+.++++.+ ++|||+.|||++++|+.+++++ | |++|++|+
T Consensus 148 e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 148 SLLKRLKEYGLEEIVHTEIEKDGTLQE-HDFSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGR 224 (241)
T ss_dssp HHHHHHHTTTCCEEEEEETTHHHHTCC-CCHHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECH
T ss_pred HHHHHHHhCCCCEEEEEeecccccCCc-CCHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeH
Confidence 557889999999999976421111123 3688899998887 8999999999999999999998 9 99999999
Q ss_pred HHHH
Q 018919 290 PVVY 293 (349)
Q Consensus 290 ~~l~ 293 (349)
+++.
T Consensus 225 al~~ 228 (241)
T 1qo2_A 225 AFLE 228 (241)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9985
No 112
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=98.66 E-value=2.8e-08 Score=96.42 Aligned_cols=147 Identities=19% Similarity=0.106 Sum_probs=91.7
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCC--cCcccccCCCC-CCch-HHHHHHHHHhcC-CcEEEEEe
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP--FLTLKNFQGLD-LGKM-DEDVKWLQTITK-LPILVKGV 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~--~~~~~~~~~~~-~~~~-~~~i~~i~~~~~-~pv~vK~v 212 (349)
..+.+++++++|+|+|+||..| |+ +-++|..|. .-+..-+.++. ...| .+.++.+|+.++ -||.+|+.
T Consensus 170 ~~~aa~~a~~aGfdgveih~~~---GY----Ll~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~ 242 (407)
T 3tjl_A 170 YTNAAQKAMDAGFDYIELHAAH---GY----LLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRIS 242 (407)
T ss_dssp HHHHHHHHHHTTCSEEEEECCT---TS----HHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHhCCCeEEECCcc---ch----HHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 3445666788999999999877 11 112232221 00000010111 1235 678999999885 48999986
Q ss_pred c-----------C--------HHHHHHH---HHcC--CCEEEEecCCC-CCCCCchh-hHHHHHHHHHHhcCCCcEEEec
Q 018919 213 L-----------T--------AEDARIA---VQAG--AAGIIVSNHGA-RQLDYVPA-TIMALEEVVKATQGRIPVFLDG 266 (349)
Q Consensus 213 ~-----------~--------~~~a~~a---~~~G--~d~I~v~~~gg-~~~~~~~~-~~~~l~~i~~~~~~~ipvia~G 266 (349)
. + .+.++.+ .+.| +|+|.++.... .+.+..+. .+..+..+++.+ ++|||++|
T Consensus 243 ~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~PvI~~G 320 (407)
T 3tjl_A 243 PWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIW--KGVILKAG 320 (407)
T ss_dssp TTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHC--CSEEEEES
T ss_pred cccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHh--CCCEEecC
Confidence 3 2 2335677 7789 99999973211 11111111 112344556665 68999999
Q ss_pred CCCCHHHHHHHHHh---C-CCEEEEchHHHH
Q 018919 267 GVRRGTDVFKALAL---G-ASGIFIGRPVVY 293 (349)
Q Consensus 267 GI~~~~dv~kal~~---G-A~~V~ig~~~l~ 293 (349)
||.+.+|+.+++.. | ||+|++||+++.
T Consensus 321 gi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia 351 (407)
T 3tjl_A 321 NYSYDAPEFKTLKEDIADKRTLVGFSRYFTS 351 (407)
T ss_dssp CGGGGTTTTHHHHHHHTTSSEEEECSHHHHH
T ss_pred CCCCHHHHHHHHHhhccCCCeEEEeChhhhh
Confidence 99999988888776 4 999999999985
No 113
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.66 E-value=1.1e-06 Score=77.68 Aligned_cols=89 Identities=17% Similarity=0.120 Sum_probs=68.5
Q ss_pred HHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 018919 195 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 274 (349)
Q Consensus 195 ~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv 274 (349)
.++..+ ..++|++.. +.|++++..+.+.|+|+|.++. . ..-+| .+.++.++..++ ++|+++.|||. .+++
T Consensus 96 v~~~~~-~~g~~~i~G-~~t~~e~~~A~~~Gad~v~~fp--a-~~~gG---~~~lk~l~~~~~-~ipvvaiGGI~-~~n~ 165 (207)
T 2yw3_A 96 VAALAQ-ARGVPYLPG-VLTPTEVERALALGLSALKFFP--A-EPFQG---VRVLRAYAEVFP-EVRFLPTGGIK-EEHL 165 (207)
T ss_dssp HHHHHH-HHTCCEEEE-ECSHHHHHHHHHTTCCEEEETT--T-TTTTH---HHHHHHHHHHCT-TCEEEEBSSCC-GGGH
T ss_pred HHHHHH-HhCCCEEec-CCCHHHHHHHHHCCCCEEEEec--C-ccccC---HHHHHHHHhhCC-CCcEEEeCCCC-HHHH
Confidence 344444 478898874 8899999999999999999943 1 11113 355666666553 79999999997 6999
Q ss_pred HHHHHhCCCEEEEchHHHH
Q 018919 275 FKALALGASGIFIGRPVVY 293 (349)
Q Consensus 275 ~kal~~GA~~V~ig~~~l~ 293 (349)
.+++++||++|.+|++++.
T Consensus 166 ~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 166 PHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp HHHHTCSSBSCEEESGGGS
T ss_pred HHHHhCCCcEEEEehhhhC
Confidence 9999999999999998763
No 114
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.66 E-value=2.5e-07 Score=82.88 Aligned_cols=170 Identities=20% Similarity=0.189 Sum_probs=105.3
Q ss_pred HHHHHHHHHcCCeEEecCCCCCCHHHHHhhCC-CceEEE-E-ee--cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCch
Q 018919 91 YATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQ-L-YV--YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRR 165 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~-~~~~~Q-l-~~--~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r 165 (349)
..+.+.|.++|+..+.- .+.-+........ +....- + |+ ....+.-...++.+.+.|++.|.+.+|...
T Consensus 32 ~~lc~eA~~~~~~aVcV--~p~~v~~a~~l~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~---- 105 (231)
T 3ndo_A 32 TALVDEAADLGVFAVCV--SPPLVSVAAGVAPSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGA---- 105 (231)
T ss_dssp HHHHHHHHHHTCSEEEE--CGGGHHHHHHHCCTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHH----
T ss_pred HHHHHHHHHhCCcEEEE--CHHHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehHh----
Confidence 36778888888775431 1112222221111 111111 1 22 123344445677788899999988776310
Q ss_pred hHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-----c----CHHH----HHHHHHcCCCEEEE
Q 018919 166 EADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV-----L----TAED----ARIAVQAGAAGIIV 231 (349)
Q Consensus 166 ~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v-----~----~~~~----a~~a~~~G~d~I~v 231 (349)
+. . .+.+. .++|+.+++..+ ...+|.+ + +.++ ++.+.++|+|+|..
T Consensus 106 ---lk------------~----g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKT 165 (231)
T 3ndo_A 106 ---AL------------A----GDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKT 165 (231)
T ss_dssp ---HH------------T----TCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEEC
T ss_pred ---hh------------c----ccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEc
Confidence 00 0 02222 567888888875 2345876 4 5544 45678999999998
Q ss_pred ecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 232 SNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 232 ~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
|..-+ ..+..+.+.+..+++.++.+++|-++||||+.+|+.+++++||+.++..+
T Consensus 166 STGf~---~~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 166 STGFH---PSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp CCSCC---TTCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred CCCCC---CCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcchhcccch
Confidence 74211 02335667777777777778999999999999999999999999665544
No 115
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.65 E-value=3.1e-07 Score=83.50 Aligned_cols=169 Identities=18% Similarity=0.112 Sum_probs=104.4
Q ss_pred HHHHHHHHHcCCeEEecCCCCCCHHHHHhhC--CCceEEEE--ee--cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 018919 91 YATARAASAAGTIMTLSSWSTSSVEEVASTG--PGIRFFQL--YV--YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGR 164 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~--~~~~~~Ql--~~--~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~ 164 (349)
..+.+.|.+.|+..+.- .+.-+....+.. .+....-+ |+ ....+.-...++.+.+.|++.|.+.++...
T Consensus 62 ~~lc~eA~~~~~aaVCV--~p~~V~~a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~--- 136 (260)
T 3r12_A 62 KKLCLEARENRFHGVCV--NPCYVKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADEIDMVINVGM--- 136 (260)
T ss_dssp HHHHHHHHHTTCSEEEE--CGGGHHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHH---
T ss_pred HHHHHHHHhcCCcEEEE--CHHHHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhh---
Confidence 36788888888775431 111222222211 11111111 22 123344445677788889999987775310
Q ss_pred hhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-----cCHHH----HHHHHHcCCCEEEEecC
Q 018919 165 READIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNH 234 (349)
Q Consensus 165 r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v-----~~~~~----a~~a~~~G~d~I~v~~~ 234 (349)
+. . .+.+. .++|+.+++..+ ...+|.+ ++.++ ++.+.++|+|+|..|..
T Consensus 137 ----lk------------~----g~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTG 195 (260)
T 3r12_A 137 ----LK------------A----KEWEYVYEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTG 195 (260)
T ss_dssp ----HH------------T----TCHHHHHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred ----hc------------c----ccHHHHHHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCC
Confidence 00 0 01222 567888888764 3345876 34443 46678999999999842
Q ss_pred CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 235 GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 235 gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
- ..+.++.+.+..+++.++++++|-++|||++.+|+.+++++||+-++..+
T Consensus 196 -f---~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS~ 246 (260)
T 3r12_A 196 -F---GTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIGTSS 246 (260)
T ss_dssp -S---SSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred -C---CCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeecch
Confidence 1 12334666666667777778999999999999999999999999765544
No 116
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.62 E-value=4.4e-07 Score=80.88 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=68.0
Q ss_pred HHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEec---CCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH
Q 018919 196 VKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 271 (349)
Q Consensus 196 i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~~---~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 271 (349)
+..+++..+. ++++. +.++++++.+.+.|+|+|.++. .+..+....+..++.+.++++.++ ++||++.|||. +
T Consensus 107 ~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~ 183 (227)
T 2tps_A 107 AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-I 183 (227)
T ss_dssp HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-T
T ss_pred HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-H
Confidence 3444554554 34433 3678889999999999999842 111111122345677888877662 39999999999 9
Q ss_pred HHHHHHHHhCCCEEEEchHHHH
Q 018919 272 TDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 272 ~dv~kal~~GA~~V~ig~~~l~ 293 (349)
+++.+++++||++|.+|+.++.
T Consensus 184 ~nv~~~~~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 184 DNAAPVIQAGADGVSMISAISQ 205 (227)
T ss_dssp TTSHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEhHHhhc
Confidence 9999999999999999999874
No 117
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.62 E-value=1.3e-06 Score=79.17 Aligned_cols=151 Identities=20% Similarity=0.245 Sum_probs=102.6
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVK 210 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK 210 (349)
.|.....+.+++++++|++.+-+++--- .| +| +-.+ .+.++.+|+.+ ++|+-+.
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg-----------~F-Vp------------nit~G~~~v~~lr~~~p~~~ldvH 92 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDN-----------HY-VP------------NLTFGPMVLKALRDYGITAGMDVH 92 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBS-----------SS-SS------------CBCCCHHHHHHHHHHTCCSCEEEE
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCC-----------Cc-Cc------------chhcCHHHHHHHHHhCCCCeEEEE
Confidence 5667778899999999999887655210 01 12 1123 57899999998 8999887
Q ss_pred Ee-cCH-HHHHHHHHcCCCEEEEecC---------------CC---------CC----------CC-----------Cc-
Q 018919 211 GV-LTA-EDARIAVQAGAAGIIVSNH---------------GA---------RQ----------LD-----------YV- 242 (349)
Q Consensus 211 ~v-~~~-~~a~~a~~~G~d~I~v~~~---------------gg---------~~----------~~-----------~~- 242 (349)
.. .++ ..++.+.++|||.|++... |- +. .| +|
T Consensus 93 Lmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ 172 (246)
T 3inp_A 93 LMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGGQ 172 (246)
T ss_dssp EECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--C
T ss_pred EeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCCc
Confidence 75 444 4577889999999999621 11 00 00 12
Q ss_pred ---hhhHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018919 243 ---PATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 314 (349)
Q Consensus 243 ---~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el 314 (349)
+.+++-+.++++..+ .+++|.++|||+ .+.+.++.++|||.+.+||+++.+ +...+.++.+++.+
T Consensus 173 ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a------~dp~~~i~~l~~~i 243 (246)
T 3inp_A 173 KFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNS------DSYKQTIDKMRDEL 243 (246)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTS------SCHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCC------CCHHHHHHHHHHHH
Confidence 445666777666542 258999999999 588989999999999999987631 22234455555544
No 118
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.60 E-value=1.2e-06 Score=77.68 Aligned_cols=151 Identities=17% Similarity=0.202 Sum_probs=93.5
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEec-CCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILV 209 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~v 209 (349)
..|.....+.++.+.+.|++.+.+.+ |.+.. . .-.+ .+.++++++.++.|+.+
T Consensus 12 a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~--------------~-----------~~~~g~~~i~~i~~~~~~~~~v 66 (220)
T 2fli_A 12 AADYANFASELARIEETDAEYVHIDIMDGQFV--------------P-----------NISFGADVVASMRKHSKLVFDC 66 (220)
T ss_dssp GSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSS--------------S-----------CBCBCHHHHHHHHTTCCSEEEE
T ss_pred eCCHHHHHHHHHHHHHcCCCEEEEEeecCCCC--------------C-----------ccccCHHHHHHHHHhCCCCEEE
Confidence 45777778889999999999876553 32200 0 0112 46677777766667666
Q ss_pred EEe-cCH-HHHHHHHHcCCCEEEEecCCC------------------------C-------------------------C
Q 018919 210 KGV-LTA-EDARIAVQAGAAGIIVSNHGA------------------------R-------------------------Q 238 (349)
Q Consensus 210 K~v-~~~-~~a~~a~~~G~d~I~v~~~gg------------------------~-------------------------~ 238 (349)
.+. .++ +.++.+.++|+|+|+++.... + .
T Consensus 67 ~l~v~d~~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g 146 (220)
T 2fli_A 67 HLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGG 146 (220)
T ss_dssp EEESSSGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSS
T ss_pred EEeecCHHHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcc
Confidence 554 333 245777777788777742110 0 0
Q ss_pred CCCchhhHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018919 239 LDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 314 (349)
Q Consensus 239 ~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el 314 (349)
....+..++.+.++++.+. .++|++++|||+ ++++.+++++|||+|.+||+++.+ +...+.++.+++++
T Consensus 147 ~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~~------~d~~~a~~~~~~~~ 218 (220)
T 2fli_A 147 QAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFKA------SDLVSQVQTLRTAL 218 (220)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTS------SCHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhCC------CCHHHHHHHHHHHh
Confidence 0011223445555555442 268999999999 799999999999999999998742 12344555555543
No 119
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.59 E-value=5.4e-07 Score=80.42 Aligned_cols=167 Identities=21% Similarity=0.203 Sum_probs=103.3
Q ss_pred HHHHHHHHHcCCeEEecCCCCCCHHHHHhhCC--Cce--EEEEeec--CChhHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 018919 91 YATARAASAAGTIMTLSSWSTSSVEEVASTGP--GIR--FFQLYVY--KDRNVVAQLVRRAERAGFKAIALTVDTPRLGR 164 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~--~~~--~~Ql~~~--~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~ 164 (349)
..+.+.+.++|+..+.- .+.-++...+... +.. .+--|+. ...+.-...++.+.+.|++.|.+.++...
T Consensus 22 ~~l~~~a~~~~~~aVcv--~p~~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~--- 96 (220)
T 1ub3_A 22 AKAAEEALEYGFYGLCI--PPSYVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGADEVDMVLHLGR--- 96 (220)
T ss_dssp HHHHHHHHHHTCSEEEC--CGGGHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHH---
T ss_pred HHHHHHHHHhCCCEEEE--CHHHHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccchh---
Confidence 46788888888765542 1212332222221 121 1112322 23344456677888899999988775310
Q ss_pred hhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-----cCHHH----HHHHHHcCCCEEEEecC
Q 018919 165 READIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNH 234 (349)
Q Consensus 165 r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v-----~~~~~----a~~a~~~G~d~I~v~~~ 234 (349)
+. . .+.+. .++++.+++..+-+ .+|.+ ++.+. ++.+.++|+|+|..|..
T Consensus 97 ----~~------------~----g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTG 155 (220)
T 1ub3_A 97 ----AK------------A----GDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTG 155 (220)
T ss_dssp ----HH------------T----TCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred ----hh------------C----CCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 00 0 01222 56788888877544 56755 35543 56788999999998742
Q ss_pred CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 235 GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 235 gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
. ..+..+.+.+..+++.++.++||-++|||++.+|+++++.+||+-++.
T Consensus 156 -f---~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG~ 204 (220)
T 1ub3_A 156 -F---GPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRLGT 204 (220)
T ss_dssp -S---SSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred -C---CCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCcccch
Confidence 1 112345555555666566689999999999999999999999994443
No 120
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.59 E-value=1.2e-06 Score=77.15 Aligned_cols=79 Identities=24% Similarity=0.285 Sum_probs=62.2
Q ss_pred ecCHHHHHHHHHcCCCEEEEecC--CCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 212 VLTAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 212 v~~~~~a~~a~~~G~d~I~v~~~--gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
+.+++++..+.+.|+|+|.+++- ++......+..++.+.++++.. ++||++.|||. ++++.+++.+||++|.+|+
T Consensus 115 ~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 115 VYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp ESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEESH
T ss_pred cCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEhH
Confidence 46788898999999999998651 1111112344678888887766 79999999999 9999999999999999999
Q ss_pred HHHH
Q 018919 290 PVVY 293 (349)
Q Consensus 290 ~~l~ 293 (349)
.++.
T Consensus 192 ~i~~ 195 (215)
T 1xi3_A 192 AVMG 195 (215)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9874
No 121
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.57 E-value=4.9e-06 Score=76.06 Aligned_cols=213 Identities=15% Similarity=0.178 Sum_probs=125.1
Q ss_pred CcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCC---------CC----C--------H---HHHHhhCC-Cce
Q 018919 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWS---------TS----S--------V---EEVASTGP-GIR 125 (349)
Q Consensus 71 ~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~---------~~----~--------~---e~i~~~~~-~~~ 125 (349)
..||+-+..+ .+ -.|+.+.+.|+.+++--.+ +. + + +|+..... -|.
T Consensus 27 ~~~iig~gaG-tG--------lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV 97 (286)
T 2p10_A 27 GEPIIGGGAG-TG--------LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPV 97 (286)
T ss_dssp TCCEEEEEES-SH--------HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCE
T ss_pred CCceEEEecc-cc--------hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCE
Confidence 3587777743 23 4789999999998873111 10 0 1 13333333 568
Q ss_pred EEEEeecCChh-HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc
Q 018919 126 FFQLYVYKDRN-VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT 203 (349)
Q Consensus 126 ~~Ql~~~~~~~-~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~ 203 (349)
+.|+.. .||. .+...++.++++|+.++ +|. |..|.-.-.+|+.+. ..+++ -+. .+.|+..++.
T Consensus 98 ~Agv~~-~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvglidG~fr~~LE-E~gm~---------~~~eve~I~~A~~~- 162 (286)
T 2p10_A 98 LAGVNG-TDPFMVMSTFLRELKEIGFAGV-QNF--PTVGLIDGLFRQNLE-ETGMS---------YAQEVEMIAEAHKL- 162 (286)
T ss_dssp EEEECT-TCTTCCHHHHHHHHHHHTCCEE-EEC--SCGGGCCHHHHHHHH-HTTCC---------HHHHHHHHHHHHHT-
T ss_pred EEEECC-cCCCcCHHHHHHHHHHhCCceE-EEC--CCcccccchhhhhHh-hcCCC---------HHHHHHHHHHHHHC-
Confidence 899654 5654 46677899999999998 554 432322211221110 00000 011 2335554443
Q ss_pred CCcEEEEEecCHHHHHHHHHcCCCEEEEecC---CCCC-CCC--chhh-HHHHHHHHH---HhcCCCcEEEec-CCCCHH
Q 018919 204 KLPILVKGVLTAEDARIAVQAGAAGIIVSNH---GARQ-LDY--VPAT-IMALEEVVK---ATQGRIPVFLDG-GVRRGT 272 (349)
Q Consensus 204 ~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~---gg~~-~~~--~~~~-~~~l~~i~~---~~~~~ipvia~G-GI~~~~ 272 (349)
++ +.+--+.++++|+.+.++|+|.|++.-. |+.- ... .... .+.+.++.+ .++.++.|++-| ||.+++
T Consensus 163 gL-~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpe 241 (286)
T 2p10_A 163 DL-LTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPE 241 (286)
T ss_dssp TC-EECCEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHH
T ss_pred CC-eEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHH
Confidence 43 2222468999999999999999999532 1210 011 1111 234444444 344567777666 999999
Q ss_pred HHHHHHHh--CCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018919 273 DVFKALAL--GASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 315 (349)
Q Consensus 273 dv~kal~~--GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~ 315 (349)
|+.+++.+ |++++..++.+... + ++..+..+.++++
T Consensus 242 Dv~~~l~~t~G~~G~~gASsier~------p-~e~ai~~~~~~fk 279 (286)
T 2p10_A 242 DARFILDSCQGCHGFYGASSMERL------P-AEEAIRSQTLAFK 279 (286)
T ss_dssp HHHHHHHHCTTCCEEEESHHHHHH------H-HHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccEEEeehhhhcC------C-HHHHHHHHHHHHH
Confidence 99999999 99999999998864 2 4555666665554
No 122
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.57 E-value=3.5e-07 Score=81.48 Aligned_cols=183 Identities=17% Similarity=0.188 Sum_probs=108.6
Q ss_pred hhhHHHHHHHHHcCCeEE-ecC-----CCCCCHHHHHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCC
Q 018919 88 EGEYATARAASAAGTIMT-LSS-----WSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (349)
Q Consensus 88 ~~~~~la~aa~~~G~~~~-~~~-----~~~~~~e~i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p 160 (349)
+....+++.. +.|+..+ ++. ++...++++++..+ .+.++-++....+. ..++.+.++|++.+.++...+
T Consensus 19 ~~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~---~~~~~~~~aGad~i~vh~~~~ 94 (218)
T 3jr2_A 19 TDAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGA---ILSRMAFEAGADWITVSAAAH 94 (218)
T ss_dssp HHHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHH---HHHHHHHHHTCSEEEEETTSC
T ss_pred HHHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHH---HHHHHHHhcCCCEEEEecCCC
Confidence 3445666664 4455544 331 12233566666644 34444444432232 356888899999998875321
Q ss_pred CCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEE--EecCHHHHHHHHHcCCCEEEEecC--C
Q 018919 161 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVK--GVLTAEDARIAVQAGAAGIIVSNH--G 235 (349)
Q Consensus 161 ~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK--~v~~~~~a~~a~~~G~d~I~v~~~--g 235 (349)
.+. .+.++.+++ .+++.++. ++.|+++++.+.+.|+|.+++... +
T Consensus 95 -----------------------------~~~~~~~~~~~~~-~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~~~~ 144 (218)
T 3jr2_A 95 -----------------------------IATIAACKKVADE-LNGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDA 144 (218)
T ss_dssp -----------------------------HHHHHHHHHHHHH-HTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHH
T ss_pred -----------------------------HHHHHHHHHHHHH-hCCccceeeeecCCHHHHHHHHHcCccceeeeecccc
Confidence 011 233555554 47766532 346788899999999999876311 1
Q ss_pred CC-CCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018919 236 AR-QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 314 (349)
Q Consensus 236 g~-~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el 314 (349)
+. .....+..++.++++. +.++|++++||| +++.+.+++++|||+|.+||+++.+ +...+.. .+++++
T Consensus 145 ~~~g~~~~~~~l~~i~~~~---~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a------~dp~~a~-~l~~~~ 213 (218)
T 3jr2_A 145 ELAGIGWTTDDLDKMRQLS---ALGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALAGA------EGQQTAA-ALREQI 213 (218)
T ss_dssp HHHTCCSCHHHHHHHHHHH---HTTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGSHH------HHHHHHH-HHHHHH
T ss_pred ccCCCcCCHHHHHHHHHHh---CCCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhcCC------CCHHHHH-HHHHHH
Confidence 10 0112333344444443 237999999999 5899999999999999999998753 2233344 555555
Q ss_pred H
Q 018919 315 E 315 (349)
Q Consensus 315 ~ 315 (349)
+
T Consensus 214 ~ 214 (218)
T 3jr2_A 214 D 214 (218)
T ss_dssp H
T ss_pred H
Confidence 4
No 123
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.57 E-value=1.2e-06 Score=79.14 Aligned_cols=121 Identities=13% Similarity=0.103 Sum_probs=91.0
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCHHHHHH
Q 018919 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTAEDARI 220 (349)
Q Consensus 141 ~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~~~a~~ 220 (349)
.+..+...|+|+|-+-+.+ .++.....+..+....++-+++ .+-+.++.++
T Consensus 118 QI~eAr~~GADaILLI~a~----------------------------L~~~~l~~l~~~A~~lGl~~Lv-EVh~~~El~r 168 (258)
T 4a29_A 118 QIDDAYNLGADTVLLIVKI----------------------------LTERELESLLEYARSYGMEPLI-LINDENDLDI 168 (258)
T ss_dssp HHHHHHHHTCSEEEEEGGG----------------------------SCHHHHHHHHHHHHHTTCCCEE-EESSHHHHHH
T ss_pred HHHHHHHcCCCeeehHHhh----------------------------cCHHHHHHHHHHHHHHhHHHHH-hcchHHHHHH
Confidence 4566788899999775532 1111134444555567887776 5789999999
Q ss_pred HHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 221 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 221 a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
+.++|++.|-|.|..-+ +-..+++...++...++.++.+|+.+||++++|+.++...|+++|.||.+++.
T Consensus 169 Al~~~a~iIGINNRnL~---tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr 238 (258)
T 4a29_A 169 ALRIGARFIGIMSRDFE---TGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMR 238 (258)
T ss_dssp HHHTTCSEEEECSBCTT---TCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HhcCCCcEEEEeCCCcc---ccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhC
Confidence 99999999988665332 32334555556666777789999999999999999999999999999999997
No 124
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.56 E-value=2e-06 Score=77.06 Aligned_cols=169 Identities=14% Similarity=0.117 Sum_probs=102.6
Q ss_pred hHHHHHHHHHcCCeEE-ecC----C---CCCCHHH---HHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecC
Q 018919 90 EYATARAASAAGTIMT-LSS----W---STSSVEE---VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~-~~~----~---~~~~~e~---i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d 158 (349)
-...++++.+.|+.++ +.. + ....++. +++..+.+..+-+|.+ ++ .+.++.+.++|++.+.+|..
T Consensus 25 ~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vn-d~---~~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 25 LGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIV-EP---DQRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESS-SH---HHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEec-CH---HHHHHHHHHcCCCEEEEEec
Confidence 3466778888886533 221 1 1223443 3333333556777763 43 35677888899999988865
Q ss_pred --CCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe-cCHHHHHHHHHcCCCEEEEecC-
Q 018919 159 --TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNH- 234 (349)
Q Consensus 159 --~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v-~~~~~a~~a~~~G~d~I~v~~~- 234 (349)
.+ +...+.++.+++. ++.+++-.. .++.+.......++|.|.+...
T Consensus 101 ~~~~-----------------------------~~~~~~~~~~~~~-g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~ 150 (230)
T 1rpx_A 101 QSST-----------------------------IHLHRTINQIKSL-GAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVN 150 (230)
T ss_dssp TTTC-----------------------------SCHHHHHHHHHHT-TSEEEEEECTTCCGGGGTTTTTTCSEEEEESSC
T ss_pred Cccc-----------------------------hhHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEc
Confidence 31 0113456666653 665544322 2344444445578998865432
Q ss_pred -CCCCCCCchhhHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 235 -GARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 235 -gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
|.......+..++.+.++++.++ .++|++++|||+ ++++.+++++|||+|.+||+++.
T Consensus 151 pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~ 212 (230)
T 1rpx_A 151 PGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 212 (230)
T ss_dssp TTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred CCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhC
Confidence 22111222334555666665542 268999999999 79998999999999999999874
No 125
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=98.55 E-value=1.1e-06 Score=78.60 Aligned_cols=90 Identities=19% Similarity=0.206 Sum_probs=69.2
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 272 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 272 (349)
.+.++..++ .+.|+++ ++.|++++..+.+.|+|+|.++. .. .-+| .+.+.+++..++ ++|+++.|||. .+
T Consensus 100 ~~v~~~ar~-~g~~~i~-Gv~t~~e~~~A~~~Gad~vk~Fp--a~-~~gG---~~~lk~l~~~~~-~ipvvaiGGI~-~~ 169 (224)
T 1vhc_A 100 PKIVKLCQD-LNFPITP-GVNNPMAIEIALEMGISAVKFFP--AE-ASGG---VKMIKALLGPYA-QLQIMPTGGIG-LH 169 (224)
T ss_dssp HHHHHHHHH-TTCCEEC-EECSHHHHHHHHHTTCCEEEETT--TT-TTTH---HHHHHHHHTTTT-TCEEEEBSSCC-TT
T ss_pred HHHHHHHHH-hCCCEEe-ccCCHHHHHHHHHCCCCEEEEee--Cc-cccC---HHHHHHHHhhCC-CCeEEEECCcC-HH
Confidence 455677776 7889887 48999999999999999999943 10 0112 456666666553 69999999995 58
Q ss_pred HHHHHHHh-CCCEEEEchHHHH
Q 018919 273 DVFKALAL-GASGIFIGRPVVY 293 (349)
Q Consensus 273 dv~kal~~-GA~~V~ig~~~l~ 293 (349)
.+.+.+++ |+++|. |+.++.
T Consensus 170 N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 170 NIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp THHHHHTSTTBCCEE-ECGGGC
T ss_pred HHHHHHhcCCCEEEE-EchhcC
Confidence 99999998 999999 887764
No 126
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.53 E-value=8e-07 Score=80.58 Aligned_cols=82 Identities=15% Similarity=0.133 Sum_probs=61.9
Q ss_pred EecCHHHHHHHHHcCCCEEEEecCCCCCC--CCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 211 GVLTAEDARIAVQAGAAGIIVSNHGARQL--DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 211 ~v~~~~~a~~a~~~G~d~I~v~~~gg~~~--~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+-++++++.+.+.|+|+|.+++-..+.. +..+..++.+.++++....++||++.||| +.+++.+++++||++|.+|
T Consensus 141 S~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~ 219 (243)
T 3o63_A 141 STHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVV 219 (243)
T ss_dssp EECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEES
T ss_pred eCCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEe
Confidence 35789999999999999999976322211 11133567777776542237999999999 8999999999999999999
Q ss_pred hHHHH
Q 018919 289 RPVVY 293 (349)
Q Consensus 289 ~~~l~ 293 (349)
++++.
T Consensus 220 sai~~ 224 (243)
T 3o63_A 220 RAITS 224 (243)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 99874
No 127
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.49 E-value=9.7e-07 Score=79.37 Aligned_cols=135 Identities=20% Similarity=0.256 Sum_probs=95.0
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEec-CCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVK 210 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK 210 (349)
.|...+.+.++++++.|++.+.+.+ |.+. +| +..+ .+.++++|+.++.|+.+-
T Consensus 14 ~D~~~l~~~i~~~~~~Gad~ihldi~DG~f-------------vp------------~~~~g~~~v~~lr~~~~~~~~vh 68 (230)
T 1tqj_A 14 ADFSRLGEEIKAVDEAGADWIHVDVMDGRF-------------VP------------NITIGPLIVDAIRPLTKKTLDVH 68 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSS-------------SS------------CBCBCHHHHHHHGGGCCSEEEEE
T ss_pred cCHhHHHHHHHHHHHcCCCEEEEEEEecCC-------------Cc------------chhhhHHHHHHHHhhcCCcEEEE
Confidence 5677778899999999999987765 2211 11 1223 578999998888888755
Q ss_pred Ee-cCH-HHHHHHHHcCCCEEEEecC--CCC------------------------C----------CC------------
Q 018919 211 GV-LTA-EDARIAVQAGAAGIIVSNH--GAR------------------------Q----------LD------------ 240 (349)
Q Consensus 211 ~v-~~~-~~a~~a~~~G~d~I~v~~~--gg~------------------------~----------~~------------ 240 (349)
.. .++ +.++.+.++|+|+|++... ... . .|
T Consensus 69 lmv~dp~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~g 148 (230)
T 1tqj_A 69 LMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFG 148 (230)
T ss_dssp EESSSGGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC---
T ss_pred EEccCHHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccC
Confidence 43 333 3478889999999988532 110 0 00
Q ss_pred ---CchhhHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 241 ---YVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 241 ---~~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
..+..++.+.++++... .++||.++|||.. +.+.++.++|||.+.+||+++.
T Consensus 149 gq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~ 206 (230)
T 1tqj_A 149 GQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN 206 (230)
T ss_dssp -CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT
T ss_pred CccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 11334667777766552 2699999999998 8998999999999999999874
No 128
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.47 E-value=3.3e-06 Score=74.80 Aligned_cols=116 Identities=18% Similarity=0.184 Sum_probs=89.4
Q ss_pred EEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCC-
Q 018919 127 FQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKL- 205 (349)
Q Consensus 127 ~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~- 205 (349)
+-+....+++...+.++.+.+.|++.+++++++|.. .+.|+.+++.++-
T Consensus 16 i~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a------------------------------~~~I~~l~~~~p~~ 65 (217)
T 3lab_A 16 IPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAG------------------------------LAAISAIKKAVPEA 65 (217)
T ss_dssp EEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTH------------------------------HHHHHHHHHHCTTS
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccH------------------------------HHHHHHHHHHCCCC
Confidence 334445688888999999999999999999876521 4779999998844
Q ss_pred cEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCC------cEEEecCCCCHHHHHHHHH
Q 018919 206 PILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI------PVFLDGGVRRGTDVFKALA 279 (349)
Q Consensus 206 pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~i------pvia~GGI~~~~dv~kal~ 279 (349)
-|.+..+.+.++++.+.++|+++|+.-+. +.+.+..+.+. ++ |++. |+.|++++.+|++
T Consensus 66 ~IGAGTVlt~~~a~~ai~AGA~fivsP~~----------~~evi~~~~~~---~v~~~~~~~~~P--G~~TptE~~~A~~ 130 (217)
T 3lab_A 66 IVGAGTVCTADDFQKAIDAGAQFIVSPGL----------TPELIEKAKQV---KLDGQWQGVFLP--GVATASEVMIAAQ 130 (217)
T ss_dssp EEEEECCCSHHHHHHHHHHTCSEEEESSC----------CHHHHHHHHHH---HHHCSCCCEEEE--EECSHHHHHHHHH
T ss_pred eEeeccccCHHHHHHHHHcCCCEEEeCCC----------cHHHHHHHHHc---CCCccCCCeEeC--CCCCHHHHHHHHH
Confidence 45666689999999999999999965221 23444444332 46 7776 8999999999999
Q ss_pred hCCCEEEE
Q 018919 280 LGASGIFI 287 (349)
Q Consensus 280 ~GA~~V~i 287 (349)
+|||.|-+
T Consensus 131 ~Gad~vK~ 138 (217)
T 3lab_A 131 AGITQLKC 138 (217)
T ss_dssp TTCCEEEE
T ss_pred cCCCEEEE
Confidence 99999976
No 129
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.47 E-value=1e-05 Score=74.14 Aligned_cols=164 Identities=25% Similarity=0.288 Sum_probs=102.6
Q ss_pred HHHHHHHHHcCCeEEecCCCCCCHHHHHhhCCCceEEEEee-----cCCh-hHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 018919 91 YATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYV-----YKDR-NVVAQLVRRAERAGFKAIALTVDTPRLGR 164 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~~Ql~~-----~~~~-~~~~~~~~~~~~~G~~~i~i~~d~p~~g~ 164 (349)
..+.+.+.+.|+..+..+.+ -++... ......++.+-. ..++ +.....++++.+.|++.+.+.++.-..
T Consensus 44 ~~~~~~a~~~~~~av~v~~~--~v~~~~-~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~v~~~~nig~~-- 118 (263)
T 1w8s_A 44 EYILRLARDAGFDGVVFQRG--IAEKYY-DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASAVGYTIYPGSG-- 118 (263)
T ss_dssp HHHHHHHHHHTCSEEEECHH--HHHHHC-CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSEEEEEECTTST--
T ss_pred HHHHHHHHhhCCCEEEECHH--HHHHhh-cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCEEEEEEecCCc--
Confidence 36888888898776653211 122222 111222333311 1111 122345678888999999887743210
Q ss_pred hhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHH---HhcCCcEEEEEec---------CHHH----HHHHHHcCCC
Q 018919 165 READIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQ---TITKLPILVKGVL---------TAED----ARIAVQAGAA 227 (349)
Q Consensus 165 r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~---~~~~~pv~vK~v~---------~~~~----a~~a~~~G~d 227 (349)
+.. ..+.+++++ +.+++|+++=... +.+. ++.+.++|+|
T Consensus 119 ------------------------~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD 174 (263)
T 1w8s_A 119 ------------------------FEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGAD 174 (263)
T ss_dssp ------------------------THHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCS
T ss_pred ------------------------CHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCC
Confidence 011 134444444 4468998875434 4433 4678899999
Q ss_pred EEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCC--CHHHHHHHH----HhCCCEEEEchHHHH
Q 018919 228 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR--RGTDVFKAL----ALGASGIFIGRPVVY 293 (349)
Q Consensus 228 ~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~--~~~dv~kal----~~GA~~V~ig~~~l~ 293 (349)
+|.++-. .+.+.+.++++.+ ..+||++.|||+ +.+|+++.+ +.||+++.+||.++.
T Consensus 175 ~vkt~~~---------~~~e~~~~~~~~~-~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~ 236 (263)
T 1w8s_A 175 AMKIKYT---------GDPKTFSWAVKVA-GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQ 236 (263)
T ss_dssp EEEEECC---------SSHHHHHHHHHHT-TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHT
T ss_pred EEEEcCC---------CCHHHHHHHHHhC-CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcC
Confidence 9999721 1457777777776 345999999999 889988877 899999999999874
No 130
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.46 E-value=9.7e-06 Score=72.56 Aligned_cols=183 Identities=16% Similarity=0.168 Sum_probs=111.6
Q ss_pred HHHHHHHHHcCCeEE-ec----CC---CCCCHHH---HHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCC
Q 018919 91 YATARAASAAGTIMT-LS----SW---STSSVEE---VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (349)
Q Consensus 91 ~~la~aa~~~G~~~~-~~----~~---~~~~~e~---i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~ 159 (349)
...++.+.+.|+.++ +. .+ ....++. +++..+.+.-+-++. .|++. .++.+.++|++.+.+|...
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv-~d~~~---~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMV-TNPSD---YVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEES-SCGGG---GHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEe-cCHHH---HHHHHHHcCCCEEEECCCC
Confidence 356677788887643 22 11 1122343 333332345555666 45543 4666777999999998753
Q ss_pred CCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-cCH-HHHHHHHHc--CCCEEEEec-
Q 018919 160 PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV-LTA-EDARIAVQA--GAAGIIVSN- 233 (349)
Q Consensus 160 p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v-~~~-~~a~~a~~~--G~d~I~v~~- 233 (349)
+ +.. .+.++.+++. ++++++-.- .++ +..+...+. ++|.|.+..
T Consensus 98 ~-----------------------------~~~~~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv 147 (228)
T 1h1y_A 98 S-----------------------------RDNWQELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTV 147 (228)
T ss_dssp C-----------------------------TTTHHHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESS
T ss_pred c-----------------------------ccHHHHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEee
Confidence 2 112 3457777664 777765432 233 334444554 999998853
Q ss_pred CCC-CCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHH
Q 018919 234 HGA-RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 234 ~gg-~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~ 312 (349)
++| ......+..++.+.++++... ++||+++|||.. +++.+++..|||.+.+||+++.+ +.....++.+++
T Consensus 148 ~pg~~g~~~~~~~l~~i~~~~~~~~-~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~~------~d~~~~~~~l~~ 219 (228)
T 1h1y_A 148 EPGFGGQKFMPEMMEKVRALRKKYP-SLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFGA------AEPGEVISALRK 219 (228)
T ss_dssp CTTCSSCCCCGGGHHHHHHHHHHCT-TSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHTS------SCHHHHHHHHHH
T ss_pred cCCCCcccCCHHHHHHHHHHHHhcC-CCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCC------CCHHHHHHHHHH
Confidence 222 111234455677777777653 799999999998 88989999999999999998742 123344555555
Q ss_pred HHH
Q 018919 313 EFE 315 (349)
Q Consensus 313 el~ 315 (349)
.++
T Consensus 220 ~~~ 222 (228)
T 1h1y_A 220 SVE 222 (228)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 131
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.45 E-value=1.2e-06 Score=79.49 Aligned_cols=128 Identities=16% Similarity=0.220 Sum_probs=92.1
Q ss_pred HHHHHHHHHcCCCEE-EEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEE-ecCHH
Q 018919 139 AQLVRRAERAGFKAI-ALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKG-VLTAE 216 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i-~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~-v~~~~ 216 (349)
.+.+++..+.|++.+ .+++|.... + .+...+.++++.+.+.+|+.+.+ +.+.+
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a~~---------~----------------~~~~~~~i~~i~~~~~~pl~vGGGIrs~e 88 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGAKD---------P----------------SKRQFALIEKLAKEVSVNLQVGGGIRSKE 88 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHHHC---------G----------------GGCCHHHHHHHHHHCCSEEEEESSCCCHH
T ss_pred HHHHHHHHHCCCCEEEEEecCcccc---------c----------------chhHHHHHHHHHHhcCCCeEeccccccHH
Confidence 456788888999987 455553210 0 01115789999999999998877 57999
Q ss_pred HHHHHHHcCCCEEEEecC---------------C----------------------CCC---------------------
Q 018919 217 DARIAVQAGAAGIIVSNH---------------G----------------------ARQ--------------------- 238 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~---------------g----------------------g~~--------------------- 238 (349)
+++.++++|||-|++... | ++.
T Consensus 89 ~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~ei 168 (243)
T 4gj1_A 89 EVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHI 168 (243)
T ss_dssp HHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEE
T ss_pred HHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEE
Confidence 999999999999998621 1 100
Q ss_pred ------CCC--chhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 239 ------LDY--VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 239 ------~~~--~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.++ .-+.++.+.++.+.+ .++|||++||+++.+|+.+ |..++++|.+|++|++
T Consensus 169 l~t~Id~DGt~~G~d~~l~~~l~~~~-~~ipviasGGv~~~~Dl~~-l~~~~~gvivg~Al~~ 229 (243)
T 4gj1_A 169 LCTDISKDGTMQGVNVRLYKLIHEIF-PNICIQASGGVASLKDLEN-LKGICSGVIVGKALLD 229 (243)
T ss_dssp EEEETTC-----CCCHHHHHHHHHHC-TTSEEEEESCCCSHHHHHH-TTTTCSEEEECHHHHT
T ss_pred EeeeecccccccCCCHHHHHHHHHhc-CCCCEEEEcCCCCHHHHHH-HHccCchhehHHHHHC
Confidence 011 123566777777665 2699999999999999965 5677999999999975
No 132
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=98.41 E-value=4.5e-06 Score=74.19 Aligned_cols=89 Identities=18% Similarity=0.182 Sum_probs=67.7
Q ss_pred HHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 018919 195 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 274 (349)
Q Consensus 195 ~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv 274 (349)
.+.+.++..+.|++. ++.|++++..+.+.|+|+|.++. .. .-+| .+.+.+++..++ ++|+++.|||. .+.+
T Consensus 100 ~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~v~~Fp--a~-~~gG---~~~lk~i~~~~~-~ipvvaiGGI~-~~n~ 170 (214)
T 1wbh_A 100 PLLKAATEGTIPLIP-GISTVSELMLGMDYGLKEFKFFP--AE-ANGG---VKALQAIAGPFS-QVRFCPTGGIS-PANY 170 (214)
T ss_dssp HHHHHHHHSSSCEEE-EESSHHHHHHHHHTTCCEEEETT--TT-TTTH---HHHHHHHHTTCT-TCEEEEBSSCC-TTTH
T ss_pred HHHHHHHHhCCCEEE-ecCCHHHHHHHHHCCCCEEEEec--Cc-cccC---HHHHHHHhhhCC-CCeEEEECCCC-HHHH
Confidence 454555557889887 58999999999999999999943 11 0112 456666666553 79999999995 5899
Q ss_pred HHHHHh-CCCEEEEchHHHH
Q 018919 275 FKALAL-GASGIFIGRPVVY 293 (349)
Q Consensus 275 ~kal~~-GA~~V~ig~~~l~ 293 (349)
.+.+++ |+++|. |+.++.
T Consensus 171 ~~~l~agg~~~v~-gS~i~~ 189 (214)
T 1wbh_A 171 RDYLALKSVLCIG-GSWLVP 189 (214)
T ss_dssp HHHHTSTTBSCEE-EGGGSC
T ss_pred HHHHhcCCCeEEE-eccccC
Confidence 999998 999999 887764
No 133
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.40 E-value=5.1e-07 Score=82.72 Aligned_cols=170 Identities=11% Similarity=0.013 Sum_probs=102.3
Q ss_pred HHHHHHHHHcCCeEEe----cCCCCCCHHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchh
Q 018919 91 YATARAASAAGTIMTL----SSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRE 166 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~----~~~~~~~~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~ 166 (349)
..+|+...+.|+..+. +......++++.+..+-+ +|+.+.- +. . .++++. +|++-+.++ +..
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~~n~~~i~~i~~~~~~p--v~vgGGi-r~--~-~~~~~l-~Ga~~Viig--s~a----- 106 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGPNNDDAAREALQESPQF--LQVGGGI-ND--T-NCLEWL-KWASKVIVT--SWL----- 106 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESSSCHHHHHHHHHHSTTT--SEEESSC-CT--T-THHHHT-TTCSCEEEC--GGG-----
T ss_pred HHHHHHHHHcCCCEEEEEeCCCCCHHHHHHHHhcCCce--EEEeCCC-CH--H-HHHHHh-cCCCEEEEC--cHH-----
Confidence 3788999988865332 220111234444444433 5664432 22 2 445555 999987753 321
Q ss_pred HHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHH-HhcCCcEEEE-----E--e-----------cCH-HHHHHHHHcC
Q 018919 167 ADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQ-TITKLPILVK-----G--V-----------LTA-EDARIAVQAG 225 (349)
Q Consensus 167 ~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~-~~~~~pv~vK-----~--v-----------~~~-~~a~~a~~~G 225 (349)
+ ++. +..+|++ .+.++.+. +..-+++-+| + + ... +.++.+.++
T Consensus 107 ------~--------~~~-g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~- 170 (260)
T 2agk_A 107 ------F--------TKE-GHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY- 170 (260)
T ss_dssp ------B--------CTT-CCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-
T ss_pred ------H--------hhc-CCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-
Confidence 0 000 0012444 34455554 3222345445 1 1 113 788999999
Q ss_pred CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcC--CCcEEEecCCCCHHHHHHHHHh--CCCEEEEchHH
Q 018919 226 AAGIIVSNHGARQLDYVPATIMALEEVVKATQG--RIPVFLDGGVRRGTDVFKALAL--GASGIFIGRPV 291 (349)
Q Consensus 226 ~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~--~ipvia~GGI~~~~dv~kal~~--GA~~V~ig~~~ 291 (349)
++.|.++....-+...|+ .++.+.+++++++. ++|||++|||++.+|+.+++.+ ||++|++|+++
T Consensus 171 a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 171 TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp CSEEEEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred cCEEEEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 999999543211223444 88999999988732 6999999999999999999998 99999999997
No 134
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=98.38 E-value=2.8e-06 Score=76.10 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=67.4
Q ss_pred HHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchh-hHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 018919 195 DVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTD 273 (349)
Q Consensus 195 ~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~d 273 (349)
.+...++..+.|++. ++.|++++..+.++|+|+|.++. . ... ..+.|..++..++ ++|+++.|||. .+.
T Consensus 110 ~v~~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~vk~FP--a-----~~~~G~~~lk~i~~~~~-~ipvvaiGGI~-~~N 179 (225)
T 1mxs_A 110 DILEAGVDSEIPLLP-GISTPSEIMMGYALGYRRFKLFP--A-----EISGGVAAIKAFGGPFG-DIRFCPTGGVN-PAN 179 (225)
T ss_dssp HHHHHHHHCSSCEEC-EECSHHHHHHHHTTTCCEEEETT--H-----HHHTHHHHHHHHHTTTT-TCEEEEBSSCC-TTT
T ss_pred HHHHHHHHhCCCEEE-eeCCHHHHHHHHHCCCCEEEEcc--C-----ccccCHHHHHHHHhhCC-CCeEEEECCCC-HHH
Confidence 455555567889887 58999999999999999999932 1 111 2456666666553 79999999994 589
Q ss_pred HHHHHH-hCCCEEEEchHHHH
Q 018919 274 VFKALA-LGASGIFIGRPVVY 293 (349)
Q Consensus 274 v~kal~-~GA~~V~ig~~~l~ 293 (349)
+.+.++ .||++|. |+.++.
T Consensus 180 ~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 180 VRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp HHHHHHSTTBCCEE-ECTTSC
T ss_pred HHHHHhccCCEEEE-EchhcC
Confidence 999999 6999999 987764
No 135
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=98.37 E-value=1e-05 Score=71.71 Aligned_cols=159 Identities=19% Similarity=0.110 Sum_probs=106.5
Q ss_pred CChhhHHHHHHHHHcCCeEE-ecCCCCCC---HHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCC
Q 018919 86 HPEGEYATARAASAAGTIMT-LSSWSTSS---VEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (349)
Q Consensus 86 ~~~~~~~la~aa~~~G~~~~-~~~~~~~~---~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~ 161 (349)
+++.-..+++++.+.|+..+ ++-.++.. ++.+++..|.. .+-.- .. .+.+.++.+.++|++.++. |.
T Consensus 23 ~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~-~IGAG---TV-lt~~~a~~ai~AGA~fivs----P~ 93 (217)
T 3lab_A 23 DLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEA-IVGAG---TV-CTADDFQKAIDAGAQFIVS----PG 93 (217)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTS-EEEEE---CC-CSHHHHHHHHHHTCSEEEE----SS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCC-eEeec---cc-cCHHHHHHHHHcCCCEEEe----CC
Confidence 44555689999999999866 33223333 34455555642 22111 11 1356788899999999852 21
Q ss_pred CCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCC------cEEEEEecCHHHHHHHHHcCCCEEEEecCC
Q 018919 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKL------PILVKGVLTAEDARIAVQAGAAGIIVSNHG 235 (349)
Q Consensus 162 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~------pv~vK~v~~~~~a~~a~~~G~d~I~v~~~g 235 (349)
.++ +.++..++ .++ |++- ++.|++++..|.++|+|.|.++-..
T Consensus 94 --------------------------~~~---evi~~~~~-~~v~~~~~~~~~P-G~~TptE~~~A~~~Gad~vK~FPa~ 142 (217)
T 3lab_A 94 --------------------------LTP---ELIEKAKQ-VKLDGQWQGVFLP-GVATASEVMIAAQAGITQLKCFPAS 142 (217)
T ss_dssp --------------------------CCH---HHHHHHHH-HHHHCSCCCEEEE-EECSHHHHHHHHHTTCCEEEETTTT
T ss_pred --------------------------CcH---HHHHHHHH-cCCCccCCCeEeC-CCCCHHHHHHHHHcCCCEEEECccc
Confidence 112 34444443 355 8875 7899999999999999999995321
Q ss_pred CCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH
Q 018919 236 ARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 236 g~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l 292 (349)
..+| ...++.++..+ .++|+++.|||. .+.+.+++++||.++..|+.+.
T Consensus 143 ---~~gG---~~~lkal~~p~-p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 143 ---AIGG---AKLLKAWSGPF-PDIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp ---TTTH---HHHHHHHHTTC-TTCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGG
T ss_pred ---cccC---HHHHHHHHhhh-cCceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhc
Confidence 1122 35666666555 379999999998 7999999999999887776554
No 136
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=98.36 E-value=1.1e-05 Score=78.37 Aligned_cols=146 Identities=16% Similarity=0.083 Sum_probs=81.7
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccc--cCC-CCCC-ch-HHHHHHHHHhc-CCcEEEEE
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKN--FQG-LDLG-KM-DEDVKWLQTIT-KLPILVKG 211 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~--~~~-~~~~-~~-~~~i~~i~~~~-~~pv~vK~ 211 (349)
..+.+++++++|+|+|+||... |+ +-++|..|. ...+. ..| +.++ .| .+.++.+|+.+ +-||.+|+
T Consensus 174 F~~AA~rA~~AGFDgVEIH~Ah---GY----Ll~QFLSp~-tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRl 245 (400)
T 4gbu_A 174 YVQAAKNSIAAGADGVEIHSAN---GY----LLNQFLDPH-SNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRL 245 (400)
T ss_dssp HHHHHHHHHHTTCSEEEEECCT---TS----HHHHHHCTT-TCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHhcCcCeeeecccc---cc----hHHheecCc-CCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEe
Confidence 3456678889999999998753 32 223343331 01111 111 1112 35 68899999998 34899987
Q ss_pred ecC--------------H----HHHHHHHHc---C--CCEEEEecCCCCC--CCCchh--hHHHHHHHHHHhcCCCcEEE
Q 018919 212 VLT--------------A----EDARIAVQA---G--AAGIIVSNHGARQ--LDYVPA--TIMALEEVVKATQGRIPVFL 264 (349)
Q Consensus 212 v~~--------------~----~~a~~a~~~---G--~d~I~v~~~gg~~--~~~~~~--~~~~l~~i~~~~~~~ipvia 264 (349)
... . +.+..+... | .+.+.++...... ...+.. .......+++.+ ++|||+
T Consensus 246 S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~ 323 (400)
T 4gbu_A 246 SPYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIW--KGPVIR 323 (400)
T ss_dssp CTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHC--CSCEEE
T ss_pred ccccccCCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHh--CCCEEE
Confidence 521 0 112223222 2 3344443211100 000000 000111234444 799999
Q ss_pred ecCCCCHHHHHHHHHh-CCCEEEEchHHHH
Q 018919 265 DGGVRRGTDVFKALAL-GASGIFIGRPVVY 293 (349)
Q Consensus 265 ~GGI~~~~dv~kal~~-GA~~V~ig~~~l~ 293 (349)
.|||.+..++.+.+.. +||+|.+||+++.
T Consensus 324 ~G~~~~~~~~~~~~~~~~aDlV~~gR~~ia 353 (400)
T 4gbu_A 324 AGNFALHPEVVREEVKDKRTLIGYGRFFIS 353 (400)
T ss_dssp ESSCTTCHHHHHHHTTSTTEEEECCHHHHH
T ss_pred eCCCCChHHHHHHHHcCCCeEhHHHHHHHH
Confidence 9999998888887775 6999999999985
No 137
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=98.30 E-value=6.3e-06 Score=74.05 Aligned_cols=164 Identities=16% Similarity=0.101 Sum_probs=97.4
Q ss_pred HHHHHHHHHcCCeEEe-cCCCCCCHHHHHhh-CCCceEEEEeec--CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchh
Q 018919 91 YATARAASAAGTIMTL-SSWSTSSVEEVAST-GPGIRFFQLYVY--KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRE 166 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~-~~~~~~~~e~i~~~-~~~~~~~Ql~~~--~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~ 166 (349)
..+.+.|.++|+..+. +-......+.+... .-..--+--|+. ...+.-...++.+.+.|++.|.+.++...
T Consensus 39 ~~l~~~a~~~~~~aVcv~p~~v~a~~~l~~~~~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdEID~vinig~----- 113 (234)
T 1n7k_A 39 RNLVREASDYGFRCAVLTPVYTVKISGLAEKLGVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATELDVVPHLSL----- 113 (234)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHTCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCEEEECCCGGG-----
T ss_pred HHHHHHHHHhCCCEEEEchHHheeehHhCCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeccchH-----
Confidence 4677888888876543 21111111122211 111111212322 23344456677888899999988775321
Q ss_pred HHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHh---cCCcEEEEEe-----cCHHH----HHHHHHcCCCEEEEecC
Q 018919 167 ADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTI---TKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNH 234 (349)
Q Consensus 167 ~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~---~~~pv~vK~v-----~~~~~----a~~a~~~G~d~I~v~~~ 234 (349)
..+ ...++++.+++. ++.|+ |.+ ++.+. ++.+.++|+|+|..|..
T Consensus 114 --------------------~~~-~v~~ei~~v~~a~~~~g~~l--KvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG 170 (234)
T 1n7k_A 114 --------------------GPE-AVYREVSGIVKLAKSYGAVV--KVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTG 170 (234)
T ss_dssp --------------------CHH-HHHHHHHHHHHHHHHTTCEE--EEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCS
T ss_pred --------------------HHH-HHHHHHHHHHHHHhhcCCeE--EEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 012 125667666665 44654 665 34443 56688999999998742
Q ss_pred CCCCCCC-chhhHHHHHH--HHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 235 GARQLDY-VPATIMALEE--VVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 235 gg~~~~~-~~~~~~~l~~--i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
. .+ +..+.+.+.. .++.++ +||-++|||++.+|+++++.+||+-++..
T Consensus 171 -~---~~~~gAt~~dv~l~~m~~~v~--v~VKaaGGirt~~~al~~i~aGa~RiG~S 221 (234)
T 1n7k_A 171 -V---YTKGGDPVTVFRLASLAKPLG--MGVKASGGIRSGIDAVLAVGAGADIIGTS 221 (234)
T ss_dssp -S---SCCCCSHHHHHHHHHHHGGGT--CEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred -C---CCCCCCCHHHHHHHHHHHHHC--CCEEEecCCCCHHHHHHHHHcCccccchH
Confidence 1 11 2345555444 555564 99999999999999999999999954443
No 138
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=98.29 E-value=1.5e-05 Score=71.68 Aligned_cols=151 Identities=15% Similarity=0.166 Sum_probs=99.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEec-CCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVK 210 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK 210 (349)
.|.....+.++.+ +.|++.+.+++ |.. | +| +-.+ ...++.+|+.++.|+-+-
T Consensus 10 ~D~~~l~~~i~~~-~~gad~lHvDvmDG~------------f-vp------------n~t~G~~~v~~lr~~~~~~~dvh 63 (231)
T 3ctl_A 10 MDLLKFKEQIEFI-DSHADYFHIDIMDGH------------F-VP------------NLTLSPFFVSQVKKLATKPLDCH 63 (231)
T ss_dssp SCGGGHHHHHHHH-HTTCSCEEEEEECSS------------S-SS------------CCCBCHHHHHHHHTTCCSCEEEE
T ss_pred CChhhHHHHHHHH-HcCCCEEEEEEEeCc------------c-Cc------------cchhcHHHHHHHHhccCCcEEEE
Confidence 4666677888999 99999976654 321 1 12 1223 578999998888887666
Q ss_pred Ee-cCHHH-HHHHHHcCCCEEEEecCC-C------------------------CC----------CC-----------C-
Q 018919 211 GV-LTAED-ARIAVQAGAAGIIVSNHG-A------------------------RQ----------LD-----------Y- 241 (349)
Q Consensus 211 ~v-~~~~~-a~~a~~~G~d~I~v~~~g-g------------------------~~----------~~-----------~- 241 (349)
.. .+++. ++.+.++|||.|++...- . +. .| +
T Consensus 64 Lmv~dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfgg 143 (231)
T 3ctl_A 64 LMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAG 143 (231)
T ss_dssp EESSCGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSS
T ss_pred EEecCHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCC
Confidence 53 45543 788999999999875321 1 00 00 1
Q ss_pred ---chhhHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHhCCCEEEEc-hHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018919 242 ---VPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIG-RPVVYSLAAEGEKGVRRVLEMLREEF 314 (349)
Q Consensus 242 ---~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~dv~kal~~GA~~V~ig-~~~l~~~~~~G~~gv~~~l~~l~~el 314 (349)
.+..++-+.++++... .+++|.++|||.. +.+.++.++|||.+.+| |+++.+ .. ...+.++.+++.+
T Consensus 144 Q~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~-~~~~~~~~aGAd~~V~G~saif~~---~d--~~~~~~~~l~~~~ 217 (231)
T 3ctl_A 144 QPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQ-ATYEKLMAAGADVFIVGTSGLFNH---AE--NIDEAWRIMTAQI 217 (231)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCST-TTHHHHHHHTCCEEEECTTTTGGG---CS--SHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhccCCCceEEEECCcCH-HHHHHHHHcCCCEEEEccHHHhCC---CC--cHHHHHHHHHHHH
Confidence 2345666666666542 2689999999985 78889999999999999 887631 11 0334555565554
Q ss_pred H
Q 018919 315 E 315 (349)
Q Consensus 315 ~ 315 (349)
+
T Consensus 218 ~ 218 (231)
T 3ctl_A 218 L 218 (231)
T ss_dssp H
T ss_pred H
Confidence 4
No 139
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.28 E-value=3.7e-06 Score=76.09 Aligned_cols=76 Identities=17% Similarity=0.177 Sum_probs=61.4
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH
Q 018919 214 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 214 ~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l 292 (349)
..+.|+.+.++|+|.|.++...+. .......++.+.++++.+ ++||+++|||++++|+.++++.|||+|++|++++
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l 112 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRD-GTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAV 112 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTT-TCSSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecCcc-cCCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHh
Confidence 457899999999999998653211 111234578888888776 7999999999999999999999999999999876
No 140
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=98.28 E-value=5.6e-05 Score=67.49 Aligned_cols=171 Identities=20% Similarity=0.117 Sum_probs=99.8
Q ss_pred HHHHHHHHHcCCeEEecCCCCCCHHHHHhhCCCceE--EEEeec--CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchh
Q 018919 91 YATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRF--FQLYVY--KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRE 166 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~--~Ql~~~--~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~ 166 (349)
..+.+.|.+.|+..+.- .+.-++...+...+... +-=|+. ...+.-...++. .+.|++.|.+.++...
T Consensus 20 ~~l~~~A~~~~~~aVcv--~p~~v~~a~~~l~gv~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~----- 91 (226)
T 1vcv_A 20 VAGARKAEELGVAAYCV--NPIYAPVVRPLLRKVKLCVVADFPFGALPTASRIALVSR-LAEVADEIDVVAPIGL----- 91 (226)
T ss_dssp HHHHHHHHHHTCSEEEE--CGGGHHHHGGGCSSSEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHH-----
T ss_pred HHHHHHHHHhCCCEEEE--CHHHHHHHHHHhCCCeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCEEEEecchhh-----
Confidence 46788888888765431 12123333322222111 111222 233333456667 7889999987775310
Q ss_pred HHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-----cCHHH----HHHHHHcCCCEEEEecCCC
Q 018919 167 ADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGA 236 (349)
Q Consensus 167 ~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v-----~~~~~----a~~a~~~G~d~I~v~~~gg 236 (349)
+. . .+.+. .++|+.+++..+- ..+|.+ ++.++ ++.+.++|+|+|..|..-+
T Consensus 92 --~~------------~----g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 92 --VK------------S----RRWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp --HH------------T----TCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCC
T ss_pred --hc------------C----CCHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 00 0 01222 5678888887643 256754 45544 5668899999999874211
Q ss_pred C------CCCCchhhH---HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh---CCC----EEEEc
Q 018919 237 R------QLDYVPATI---MALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GAS----GIFIG 288 (349)
Q Consensus 237 ~------~~~~~~~~~---~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~---GA~----~V~ig 288 (349)
. ..+.+..+. +.+.++.+.++++++|-++|||++.+|+++++.+ ||+ -++..
T Consensus 153 ~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 153 EEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp CHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecC
Confidence 0 011233344 4444444447678999999999999999999999 999 66544
No 141
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.26 E-value=6.4e-06 Score=74.02 Aligned_cols=72 Identities=19% Similarity=0.195 Sum_probs=57.3
Q ss_pred CHHHHHHHHHcCC-----CEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 214 TAEDARIAVQAGA-----AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 214 ~~~~a~~a~~~G~-----d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
+++.++...+.|. ..|.+... |. ....+.+.++++.+. ++|+++.|||++++++.+++. |||+|.+|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~~-G~-----~~~~~~i~~i~~~~~-~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEYS-GT-----YGNPELVAEVKKVLD-KARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECT-TS-----CCCHHHHHHHHHHCS-SSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeCC-CC-----cchHHHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 5666777777776 77777652 32 335778888887752 689999999999999999888 99999999
Q ss_pred hHHHH
Q 018919 289 RPVVY 293 (349)
Q Consensus 289 ~~~l~ 293 (349)
++++.
T Consensus 219 Sa~v~ 223 (234)
T 2f6u_A 219 NVIYE 223 (234)
T ss_dssp HHHHH
T ss_pred hHHHh
Confidence 99985
No 142
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.21 E-value=1.4e-05 Score=70.00 Aligned_cols=166 Identities=18% Similarity=0.112 Sum_probs=94.3
Q ss_pred hhhHHHHHHHHHcCCeEE-ecC-----CCCCCHHHHHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCC
Q 018919 88 EGEYATARAASAAGTIMT-LSS-----WSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (349)
Q Consensus 88 ~~~~~la~aa~~~G~~~~-~~~-----~~~~~~e~i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p 160 (349)
+....+++.+.. |+..+ ++. .+...++++++..| .+.+.-+.. .|. ....++.+.++|++.+.+|....
T Consensus 13 ~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~~~~~~i~~~l~~-~di--~~~~~~~a~~~Gad~v~vh~~~~ 88 (207)
T 3ajx_A 13 EAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKAHPDKIVFADMKT-MDA--GELEADIAFKAGADLVTVLGSAD 88 (207)
T ss_dssp HHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHHSTTSEEEEEEEE-CSC--HHHHHHHHHHTTCSEEEEETTSC
T ss_pred HHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHhCCCCeEEEEEEe-cCc--cHHHHHHHHhCCCCEEEEeccCC
Confidence 344566666655 54432 221 12223556666654 234433332 241 12356788889999998876421
Q ss_pred CCCchhHHhhhhcCCCCcCcccccCCCCCCchH-HHHHHHHHhcCCcEEEEEe--cCHHH-HHHHHHcCCCEEEEec-CC
Q 018919 161 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKMD-EDVKWLQTITKLPILVKGV--LTAED-ARIAVQAGAAGIIVSN-HG 235 (349)
Q Consensus 161 ~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~pv~vK~v--~~~~~-a~~a~~~G~d~I~v~~-~g 235 (349)
.... +.++.+++ .+.++.+-.. .++++ ++.+.+.|+|.|.+.. ..
T Consensus 89 -----------------------------~~~~~~~~~~~~~-~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~~~ 138 (207)
T 3ajx_A 89 -----------------------------DSTIAGAVKAAQA-HNKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLD 138 (207)
T ss_dssp -----------------------------HHHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHH
T ss_pred -----------------------------hHHHHHHHHHHHH-cCCceEEEEecCCChHHHHHHHHHhCCCEEEEEeccc
Confidence 0112 22344443 4666533111 15655 6777788999995532 11
Q ss_pred CCCCCCchhhH-HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 236 ARQLDYVPATI-MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 236 g~~~~~~~~~~-~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
+. ..|.... +.++++... ++|++++|||+ ++++.++++.|||+|.+||+++.
T Consensus 139 ~~--~~g~~~~~~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 139 EQ--AKPGFDLNGLLAAGEKA---RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp HH--TSTTCCTHHHHHHHHHH---TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHHT
T ss_pred cc--ccCCCchHHHHHHhhCC---CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeeccC
Confidence 00 0111111 444444332 68999999998 78898999999999999999874
No 143
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.19 E-value=6e-05 Score=70.01 Aligned_cols=115 Identities=22% Similarity=0.243 Sum_probs=76.0
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHH---HhcCCcEEEEEe-----
Q 018919 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQ---TITKLPILVKGV----- 212 (349)
Q Consensus 141 ~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~---~~~~~pv~vK~v----- 212 (349)
.++.+.+.|++++.++++.-. +. +....+.+.+++ +.+++|+++=..
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs---~~----------------------~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~ 184 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGS---EY----------------------EHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDM 184 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTS---TT----------------------HHHHHHHHHHHHHHHHTTTCCEEEEECC----
T ss_pred HHHHHHHCCCCEEEEEEECCC---Cc----------------------HHHHHHHHHHHHHHHHHcCCEEEEECCCCCcc
Confidence 466778899999988875310 00 001133344443 345899887221
Q ss_pred -cCHH----HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH-H----HHHHHHHhCC
Q 018919 213 -LTAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-T----DVFKALALGA 282 (349)
Q Consensus 213 -~~~~----~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-~----dv~kal~~GA 282 (349)
.+++ .++.+.++|+|+|.++-.+ +.+.++++.+ ++||++.||+... + .+.+++.+||
T Consensus 185 ~~d~e~i~~aariA~elGAD~VKt~~t~-----------e~~~~vv~~~--~vPVv~~GG~~~~~~~~l~~v~~ai~aGA 251 (295)
T 3glc_A 185 VRDQRYFSLATRIAAEMGAQIIKTYYVE-----------KGFERIVAGC--PVPIVIAGGKKLPEREALEMCWQAIDQGA 251 (295)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCT-----------TTHHHHHHTC--SSCEEEECCSCCCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEeCCCH-----------HHHHHHHHhC--CCcEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 2333 4678899999999986211 2345666555 7999999999953 3 3556678999
Q ss_pred CEEEEchHHHH
Q 018919 283 SGIFIGRPVVY 293 (349)
Q Consensus 283 ~~V~ig~~~l~ 293 (349)
++|.+||.++.
T Consensus 252 ~Gv~vGRnI~q 262 (295)
T 3glc_A 252 SGVDMGRNIFQ 262 (295)
T ss_dssp SEEEESHHHHT
T ss_pred eEEEeHHHHhc
Confidence 99999998874
No 144
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=98.17 E-value=0.00016 Score=64.30 Aligned_cols=186 Identities=13% Similarity=0.127 Sum_probs=121.0
Q ss_pred hHHHHHHHHHcCCeEEecCC------C---CCCH----HHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEe
Q 018919 90 EYATARAASAAGTIMTLSSW------S---TSSV----EEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~------~---~~~~----e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~ 156 (349)
+..-.+.+.+.|..-.++|. + ..+. +++.+..+++..+|+.. .|.+.+.+.++++.+.+ +-+.|.
T Consensus 9 n~~ei~~~~~~g~i~GVTTNPsli~k~~~~g~~~~~~~~ei~~~v~G~Vs~EV~a-~d~e~mi~eA~~L~~~~-~nv~IK 86 (223)
T 3s1x_A 9 NIDEIRTGVNWGIVDGVTTNPTLISKEAVNGKKYGDIIREILKIVDGPVSVEVVS-TKYEGMVEEARKIHGLG-DNAVVK 86 (223)
T ss_dssp CHHHHHHHHHHTCCCEEECCHHHHHHHSCTTCCHHHHHHHHHHHCSSCEEEECCC-CSHHHHHHHHHHHHHTC-TTEEEE
T ss_pred CHHHHHHHHhcCCcccccCCHHHHHhhhccCCCHHHHHHHHHHhCCCCEEEEEcc-CCHHHHHHHHHHHHHhC-CCEEEE
Confidence 44445556666654444433 1 1233 34555567778889875 67777878888888775 445666
Q ss_pred cCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCC
Q 018919 157 VDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGA 236 (349)
Q Consensus 157 ~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg 236 (349)
+.++.. | .+.++.+.+. ++++-+-.+.+...|..|.++||+.|.. .=|
T Consensus 87 IP~T~e---------------G--------------l~A~~~L~~~-GI~vn~TlifS~~QA~~Aa~AGa~yISP--fvg 134 (223)
T 3s1x_A 87 IPMTED---------------G--------------LRAIKTLSSE-HINTNCTLVFNPIQALLAAKAGVTYVSP--FVG 134 (223)
T ss_dssp EESSHH---------------H--------------HHHHHHHHHT-TCCEEEEEECSHHHHHHHHHTTCSEEEE--BSH
T ss_pred eCCCHH---------------H--------------HHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHcCCeEEEe--ecc
Confidence 543210 0 3456666654 8999998999999999999999998865 334
Q ss_pred CCCCCchhhHHHHHHHHHHh---cCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcC--HHHHHHHHHHH
Q 018919 237 RQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEML 310 (349)
Q Consensus 237 ~~~~~~~~~~~~l~~i~~~~---~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G--~~gv~~~l~~l 310 (349)
|-.|.+.+....+.++.+.+ +.+..|++.+ +|+..++.++..+|||.+-+.-.++..+...- ..|++++.+.+
T Consensus 135 Ri~d~g~dG~~~v~~i~~~~~~~~~~T~IlaAS-~Rn~~~v~~aa~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~Dw 212 (223)
T 3s1x_A 135 RLDDIGEDGMQIIDMIRTIFNNYIIKTQILVAS-IRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKFLEDW 212 (223)
T ss_dssp HHHHTTSCTHHHHHHHHHHHHHTTCCSEEEEBS-CCSHHHHHHHHHHTCSEEEECHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred hHhhcCCCHHHHHHHHHHHHHHcCCCCEEEEEe-CCCHHHHHHHHHcCCCEEEeCHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 43334444455566665544 2245566555 99999999999999999999998887654311 23455444444
No 145
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=98.15 E-value=0.00037 Score=61.42 Aligned_cols=186 Identities=16% Similarity=0.121 Sum_probs=123.9
Q ss_pred hHHHHHHHHHcCCeEEecCC------C-CCCH----HHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecC
Q 018919 90 EYATARAASAAGTIMTLSSW------S-TSSV----EEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~------~-~~~~----e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d 158 (349)
+..-.+.+.+.|..-.++|. + ..+. .++.+..+++..+|+. ..|.+.+.+.++++.+.+ +-+.|.+.
T Consensus 9 n~~ei~~~~~~g~i~GVTTNPsli~k~~g~~~~~~~~eI~~~v~G~Vs~EV~-a~d~e~mi~ea~~l~~~~-~nv~IKIP 86 (212)
T 3r8r_A 9 NIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVI-SLKAEEMIEEGKELAKIA-PNITVKIP 86 (212)
T ss_dssp CHHHHHHHHHTTCEEEEECCHHHHHTSCSSCHHHHHHHHHHHCCSCEEEECC-CSSHHHHHHHHHHHHTTC-TTEEEEEE
T ss_pred CHHHHHHHHhcCCcccccCCHHHHHHccCCCHHHHHHHHHHhcCCCEEEEEe-cCCHHHHHHHHHHHHHhC-CCEEEEeC
Confidence 55666777888877666654 1 1233 3445556777888985 367777777778877775 44566554
Q ss_pred CCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 159 TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ 238 (349)
Q Consensus 159 ~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~ 238 (349)
+... | .+.++.+.+. ++++-+-.+.+...|..|.++||+.|.. .=||-
T Consensus 87 ~T~e---------------G--------------l~A~~~L~~~-GI~vn~TlifS~~Qa~~Aa~AGa~yISP--fvgRi 134 (212)
T 3r8r_A 87 MTSD---------------G--------------LKAVRALTDL-GIKTNVTLIFNANQALLAARAGATYVSP--FLGRL 134 (212)
T ss_dssp SSHH---------------H--------------HHHHHHHHHT-TCCEEEEEECSHHHHHHHHHHTCSEEEE--BHHHH
T ss_pred CCHH---------------H--------------HHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHcCCeEEEe--ccchh
Confidence 3210 0 3456666554 8999998999999999999999998865 33443
Q ss_pred CCCchhhHHHHHHHHHHh---cCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcC--HHHHHHHHHHH
Q 018919 239 LDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEML 310 (349)
Q Consensus 239 ~~~~~~~~~~l~~i~~~~---~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G--~~gv~~~l~~l 310 (349)
.|.+.+....+.++.+.+ +.+..|++.+ +|+..++.++..+|||.+-+.-.++..+...- ..|++++.+.|
T Consensus 135 ~d~~~dG~~~v~~i~~~~~~~~~~t~ilaAS-~R~~~~v~~~a~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~Dw 210 (212)
T 3r8r_A 135 DDIGHNGLDLISEVKQIFDIHGLDTQIIAAS-IRHPQHVTEAALRGAHIGTMPLKVIHALTKHPLTDKGIEQFLADW 210 (212)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHTCCCEEEEBS-CCSHHHHHHHHHTTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred hhcCCChHHHHHHHHHHHHHcCCCCEEEEec-CCCHHHHHHHHHcCCCEEEcCHHHHHHHHcCCcHHHHHHHHHHHh
Confidence 334444556666665544 2355566555 99999999999999999999988887654311 23454444433
No 146
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.13 E-value=1.2e-05 Score=72.54 Aligned_cols=138 Identities=20% Similarity=0.245 Sum_probs=87.4
Q ss_pred HHHHHHHcCCeEEecCCCCCCHHH------HHhh-CCCceEEEEeec-------CChhHHHHHHHHHHHcCCCEEEEecC
Q 018919 93 TARAASAAGTIMTLSSWSTSSVEE------VAST-GPGIRFFQLYVY-------KDRNVVAQLVRRAERAGFKAIALTVD 158 (349)
Q Consensus 93 la~aa~~~G~~~~~~~~~~~~~e~------i~~~-~~~~~~~Ql~~~-------~~~~~~~~~~~~~~~~G~~~i~i~~d 158 (349)
+.....+.|+...-.|-+..+-+| +++. .-+..|++|+.- .|+..+.+.++++.+.|+..+.++.|
T Consensus 65 ~~~~i~~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~d 144 (265)
T 1wv2_A 65 LLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSD 144 (265)
T ss_dssp -----CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHhhhhhcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 333444445554444444444443 1222 224568888664 45666777888888889999877888
Q ss_pred CCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEE-EecCHHHHHHHHHcCCCEEEEec
Q 018919 159 TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVK-GVLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 159 ~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK-~v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
.|..++|..++...+-+|.+.-.-...++.+ ++.|+++++..++||++. ++.+++++..+.+.|+|+|.+..
T Consensus 145 d~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~---~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 145 DPIIARQLAEIGCIAVMPLAGLIGSGLGICN---PYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp CHHHHHHHHHSCCSEEEECSSSTTCCCCCSC---HHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred CHHHHHHHHHhCCCEEEeCCccCCCCCCcCC---HHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 8877777776655443442210101111222 678899999889999988 47899999999999999999853
No 147
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=98.09 E-value=3.5e-05 Score=68.76 Aligned_cols=165 Identities=16% Similarity=0.081 Sum_probs=95.1
Q ss_pred CHHHHHhhCCC-ceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc
Q 018919 113 SVEEVASTGPG-IRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK 191 (349)
Q Consensus 113 ~~e~i~~~~~~-~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~ 191 (349)
-++++++..|+ ..++=+.....+... .+.+.++|++.+.+|..+. .+
T Consensus 48 ~v~~l~~~~p~~~iflDlKl~Dip~t~---~~~~~~~Gad~vtVH~~~g-----------------------------~~ 95 (221)
T 3exr_A 48 LVEVLRSLFPDKIIVADTKCADAGGTV---AKNNAVRGADWMTCICSAT-----------------------------IP 95 (221)
T ss_dssp HHHHHHHHCTTSEEEEEEEECSCHHHH---HHHHHTTTCSEEEEETTSC-----------------------------HH
T ss_pred HHHHHHHhCCCCcEEEEEEeeccHHHH---HHHHHHcCCCEEEEeccCC-----------------------------HH
Confidence 35666666553 334444332223332 3346788999988876432 01
Q ss_pred h-HHHHHHHHHhcC--CcEEEEEe--cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEec
Q 018919 192 M-DEDVKWLQTITK--LPILVKGV--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 266 (349)
Q Consensus 192 ~-~~~i~~i~~~~~--~pv~vK~v--~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 266 (349)
. .+.++.+++.-. ..+.|-.. .+.+.++.+.+.|++.+++.-....+.++...+.+.+..+++.++.+++|.++|
T Consensus 96 ~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~g 175 (221)
T 3exr_A 96 TMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTG 175 (221)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEEC
Confidence 1 223444544321 22333222 357778888888999888842111112222233445555655554478899999
Q ss_pred CCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 018919 267 GVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFEL 316 (349)
Q Consensus 267 GI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~ 316 (349)
|| +++++.++..+|||.+.+||+++.+ +...+.++.++++++.
T Consensus 176 GI-~~~~~~~~~~aGad~~VvG~~I~~a------~dp~~a~~~~~~~~~~ 218 (221)
T 3exr_A 176 GL-SVDTLKLFEGVDVFTFIAGRGITEA------KNPAGAARAFKDEIKR 218 (221)
T ss_dssp SC-CGGGGGGGTTCCCSEEEECHHHHTS------SSHHHHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHCCCCEEEECchhhCC------CCHHHHHHHHHHHHHH
Confidence 99 4577888888999999999987632 1123455666666654
No 148
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=98.08 E-value=0.00014 Score=64.25 Aligned_cols=158 Identities=11% Similarity=0.083 Sum_probs=95.1
Q ss_pred CHHHHHhhCCC-ceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc
Q 018919 113 SVEEVASTGPG-IRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK 191 (349)
Q Consensus 113 ~~e~i~~~~~~-~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~ 191 (349)
.++.+++..|+ ..++-+.....+.. .++.+.++|++.+.+|.... .+
T Consensus 46 ~i~~l~~~~p~~~v~lD~kl~dip~t---~~~~~~~~Gad~itvh~~~g-----------------------------~~ 93 (216)
T 1q6o_A 46 AVRDLKALYPHKIVLADAKIADAGKI---LSRMCFEANADWVTVICCAD-----------------------------IN 93 (216)
T ss_dssp HHHHHHHHCTTSEEEEEEEECSCHHH---HHHHHHHTTCSEEEEETTSC-----------------------------HH
T ss_pred HHHHHHHhCCCCeEEEEEEecccHHH---HHHHHHhCCCCEEEEeccCC-----------------------------HH
Confidence 45666666542 23333332222333 34467789999998876431 01
Q ss_pred h-HHHHHHHHHhcCCcEEEEEe--cCHHHHHHHHHcCCCEEEEecC-----CCCCCCCchhhHHHHHHHHHHhcCCCcEE
Q 018919 192 M-DEDVKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSNH-----GARQLDYVPATIMALEEVVKATQGRIPVF 263 (349)
Q Consensus 192 ~-~~~i~~i~~~~~~pv~vK~v--~~~~~a~~a~~~G~d~I~v~~~-----gg~~~~~~~~~~~~l~~i~~~~~~~ipvi 263 (349)
. ...++.+++ .+.++.++.+ .+...++.+.+.|.+.+++.-. .| .+ | ..+.+.++++.++.++||+
T Consensus 94 ~l~~~~~~~~~-~g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~a~~~~~~G--~~-g--~~~~i~~lr~~~~~~~~i~ 167 (216)
T 1q6o_A 94 TAKGALDVAKE-FNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAG--VA-W--GEADITAIKRLSDMGFKVT 167 (216)
T ss_dssp HHHHHHHHHHH-TTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHHHHHTT--CC-C--CHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHH-cCCCceeeeeeCCChhhHHHHHhcCcHHHHHHHHHHHHhcC--CC-C--CHHHHHHHHHhcCCCCcEE
Confidence 1 233555554 4777655443 2355667777788887777311 11 11 2 2455556666554468899
Q ss_pred EecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018919 264 LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 315 (349)
Q Consensus 264 a~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~ 315 (349)
++|||+ ++.+.+++++|||.+.+||+++.+ .. ..+.++.++++++
T Consensus 168 v~GGI~-~~~~~~~~~aGad~ivvG~~I~~a---~d---p~~~~~~~~~~i~ 212 (216)
T 1q6o_A 168 VTGGLA-LEDLPLFKGIPIHVFIAGRSIRDA---AS---PVEAARQFKRSIA 212 (216)
T ss_dssp EESSCC-GGGGGGGTTSCCSEEEESHHHHTS---SC---HHHHHHHHHHHHH
T ss_pred EECCcC-hhhHHHHHHcCCCEEEEeehhcCC---CC---HHHHHHHHHHHHH
Confidence 999999 678888999999999999998742 12 2344555555554
No 149
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=98.08 E-value=5e-05 Score=66.88 Aligned_cols=154 Identities=14% Similarity=0.151 Sum_probs=91.9
Q ss_pred CCCHHHHHhhCCCceEEEEeecCC-hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCC
Q 018919 111 TSSVEEVASTGPGIRFFQLYVYKD-RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL 189 (349)
Q Consensus 111 ~~~~e~i~~~~~~~~~~Ql~~~~~-~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~ 189 (349)
...++++++......++-+.. .| .......++.+.++|++.+.+|....
T Consensus 40 ~~~i~~lr~~~~~~v~~D~kl-~DI~~t~~~~v~~~~~~Gad~vtvh~~~g----------------------------- 89 (208)
T 2czd_A 40 VDIIRRLKEETGVEIIADLKL-ADIPNTNRLIARKVFGAGADYVIVHTFVG----------------------------- 89 (208)
T ss_dssp TTHHHHHHHHHCCEEEEEEEE-CSCHHHHHHHHHHHHHTTCSEEEEESTTC-----------------------------
T ss_pred HHHHHHHHHcCCCEEEEEeee-CchHHHHHHHHHHHHhcCCCEEEEeccCC-----------------------------
Confidence 334566665521123333322 23 23445677888899999998876432
Q ss_pred CchHHHHHHHHHhcCCcEEEEEec-C---------HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCC
Q 018919 190 GKMDEDVKWLQTITKLPILVKGVL-T---------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR 259 (349)
Q Consensus 190 ~~~~~~i~~i~~~~~~pv~vK~v~-~---------~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 259 (349)
.+.++.+++..++.+...... . ...++.+.+.|+++++++.+ ..+.+.++++.++ .
T Consensus 90 ---~~~i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~-~ 155 (208)
T 2czd_A 90 ---RDSVMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT----------RPERIGYIRDRLK-E 155 (208)
T ss_dssp ---HHHHHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS----------STHHHHHHHHHSC-T
T ss_pred ---HHHHHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhCC-C
Confidence 123555554332222222110 0 12367788999999987543 1244556666653 2
Q ss_pred CcEEEecCCCC-HHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018919 260 IPVFLDGGVRR-GTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 314 (349)
Q Consensus 260 ipvia~GGI~~-~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el 314 (349)
-+++++|||+. +.++.+++++|||.+.+||+++.+ +...+.++.+++++
T Consensus 156 ~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a------~dp~~~~~~l~~~i 205 (208)
T 2czd_A 156 GIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA------PNPREAAKAIYDEI 205 (208)
T ss_dssp TCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS------SSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC------CCHHHHHHHHHHHH
Confidence 34679999997 558999999999999999998852 12345566666654
No 150
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.05 E-value=2.8e-05 Score=70.19 Aligned_cols=76 Identities=26% Similarity=0.302 Sum_probs=59.6
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.++|+|.|.++..... .......++.+.++++.+ ++||++.|||++.+++.+++++|||+|.+|+..+.
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISAT-HEERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSS-TTCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCcc-ccCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 36788889999999998743211 112234566777777665 79999999999999999999999999999998874
No 151
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=98.05 E-value=2.8e-05 Score=70.90 Aligned_cols=122 Identities=20% Similarity=0.175 Sum_probs=79.5
Q ss_pred hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcC-CcEEEEEe
Q 018919 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITK-LPILVKGV 212 (349)
Q Consensus 135 ~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~-~pv~vK~v 212 (349)
.+.-...++.+.+.|++.|.+.++... +. . .+.+. .++|+.+++..+ .+..+|.+
T Consensus 84 ~~~Kv~E~~~Av~~GAdEIDmVinig~-------l~------------~----g~~~~v~~ei~~v~~a~~~~g~~lKvI 140 (260)
T 1p1x_A 84 IDIALAETRAAIAYGADEVDVVFPYRA-------LM------------A----GNEQVGFDLVKACKEACAAANVLLKVI 140 (260)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCHHH-------HH------------T----TCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccHHh-------hh------------C----CCHHHHHHHHHHHHHHhcccCCeEEEE
Confidence 344456677888899999987775310 00 0 12233 567888887653 23466776
Q ss_pred c------CHH----HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHH-----hcCCCcEEEecCCCCHHHHHHH
Q 018919 213 L------TAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA-----TQGRIPVFLDGGVRRGTDVFKA 277 (349)
Q Consensus 213 ~------~~~----~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~-----~~~~ipvia~GGI~~~~dv~ka 277 (349)
. +.+ -++.+.++|+|+|..|.. . ..+..+.+.+..+++. ++.+++|-++|||++.+|++++
T Consensus 141 lEt~~L~d~e~i~~a~~ia~eaGADfVKTSTG-f---~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~ 216 (260)
T 1p1x_A 141 IETGELKDEALIRKASEISIKAGADFIKTSTG-K---VAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKY 216 (260)
T ss_dssp CCHHHHCSHHHHHHHHHHHHHTTCSEEECCCS-C---SSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHH
T ss_pred EecccCCcHHHHHHHHHHHHHhCCCEEEeCCC-C---CCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHH
Confidence 2 233 246688999999998742 1 1122344533333333 3468999999999999999999
Q ss_pred HHhCCC
Q 018919 278 LALGAS 283 (349)
Q Consensus 278 l~~GA~ 283 (349)
+.+||+
T Consensus 217 i~aga~ 222 (260)
T 1p1x_A 217 LAIADE 222 (260)
T ss_dssp HHHHHH
T ss_pred HHhhhh
Confidence 999876
No 152
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.03 E-value=3.3e-05 Score=69.76 Aligned_cols=76 Identities=17% Similarity=0.226 Sum_probs=59.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.++|+|.|.++.-.+.. ......++.+.++++.+ ++||++.|||++++++.+++++|||+|.+|+..+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITASV-EKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCSS-SHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCchhh-cCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 366788899999999987532211 12234566777777654 79999999999999999999999999999998764
No 153
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=98.02 E-value=2.8e-05 Score=71.47 Aligned_cols=124 Identities=15% Similarity=0.198 Sum_probs=78.9
Q ss_pred hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc---h-HHHHHHHHHhcCCcEEEE
Q 018919 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK---M-DEDVKWLQTITKLPILVK 210 (349)
Q Consensus 135 ~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~---~-~~~i~~i~~~~~~pv~vK 210 (349)
.+.-...++.+.+.|++.|.+.++... +.. .+.+ . .++|+.+++..+ +..+|
T Consensus 105 ~~~Kv~E~~~Av~~GAdEIDmVinig~-------lks----------------g~~~~~~~v~~eI~~v~~a~~-~~~lK 160 (281)
T 2a4a_A 105 MEKVLNDTEKALDDGADEIDLVINYKK-------IIE----------------NTDEGLKEATKLTQSVKKLLT-NKILK 160 (281)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCHHH-------HHH----------------SHHHHHHHHHHHHHHHHTTCT-TSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecchHh-------hhC----------------CChhHHHHHHHHHHHHHHHhc-CCceE
Confidence 344456677888899999987775310 000 0112 2 567888888764 34668
Q ss_pred Eec------CHH----HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHh-------cCCCcEEEecCCCCHHH
Q 018919 211 GVL------TAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-------QGRIPVFLDGGVRRGTD 273 (349)
Q Consensus 211 ~v~------~~~----~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~-------~~~ipvia~GGI~~~~d 273 (349)
.+. +.+ -++.+.++|+|+|..|..-+ .....+.....+.++.+.. +.+++|-++|||++.+|
T Consensus 161 VIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~-~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~ 239 (281)
T 2a4a_A 161 VIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKV-QINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNT 239 (281)
T ss_dssp EECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCS-SCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHH
T ss_pred EEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC-CCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHH
Confidence 773 233 24668899999999874211 0001123334444443322 56899999999999999
Q ss_pred HHHHHHhCCC
Q 018919 274 VFKALALGAS 283 (349)
Q Consensus 274 v~kal~~GA~ 283 (349)
+++++.+||+
T Consensus 240 al~~i~aga~ 249 (281)
T 2a4a_A 240 ASHYILLARR 249 (281)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 9999999886
No 154
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=98.00 E-value=0.00033 Score=64.97 Aligned_cols=178 Identities=11% Similarity=0.042 Sum_probs=110.0
Q ss_pred hHHHHHHHHHcCCeEEecCCC-------------CCCHHHHH-------hhCCCceEEEE---eecCChhHHHHHHHHHH
Q 018919 90 EYATARAASAAGTIMTLSSWS-------------TSSVEEVA-------STGPGIRFFQL---YVYKDRNVVAQLVRRAE 146 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~~-------------~~~~e~i~-------~~~~~~~~~Ql---~~~~~~~~~~~~~~~~~ 146 (349)
+...|+.+.++|+..++.+.+ ..+++++. +..+.|....+ |. .+++...+.+++++
T Consensus 26 D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~~~~~~v~~l~ 104 (295)
T 1xg4_A 26 NANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFG-SSAFNVARTVKSMI 104 (295)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSS-SSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccC-CCHHHHHHHHHHHH
Confidence 447899999999887653221 13555543 23344566676 43 36777888899999
Q ss_pred HcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEEEecC----------
Q 018919 147 RAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKGVLT---------- 214 (349)
Q Consensus 147 ~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~v~~---------- 214 (349)
++|+.++.|.=.+. |+..+-.....+.+.+. .+.|+.+++.. +.++.+.....
T Consensus 105 ~aGa~gv~iEd~~~---------------~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~a 169 (295)
T 1xg4_A 105 KAGAAGLHIEDQVG---------------AKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAA 169 (295)
T ss_dssp HHTCSEEEEECBCS---------------SCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHH
T ss_pred HcCCeEEEECCCCC---------------CcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHH
Confidence 99999987643221 11110000000112222 45566666654 45666655422
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCC--CCHH-HHHHHHHhCCCEEEEchHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV--RRGT-DVFKALALGASGIFIGRPV 291 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI--~~~~-dv~kal~~GA~~V~ig~~~ 291 (349)
.+.++...++|||.|.+ + +.++.+.+.++.+.+ ++|++++.-. .++. ...+.-++|.+.|.+|...
T Consensus 170 i~ra~ay~eAGAd~i~~--e-------~~~~~~~~~~i~~~~--~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~ 238 (295)
T 1xg4_A 170 IERAQAYVEAGAEMLFP--E-------AITELAMYRQFADAV--QVPILANITEFGATPLFTTDELRSAHVAMALYPLSA 238 (295)
T ss_dssp HHHHHHHHHTTCSEEEE--T-------TCCSHHHHHHHHHHH--CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHH
T ss_pred HHHHHHHHHcCCCEEEE--e-------CCCCHHHHHHHHHHc--CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHH
Confidence 25578899999999999 2 234678888898888 6899775432 2222 3334445999999999988
Q ss_pred HHH
Q 018919 292 VYS 294 (349)
Q Consensus 292 l~~ 294 (349)
+.+
T Consensus 239 ~~a 241 (295)
T 1xg4_A 239 FRA 241 (295)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 155
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.97 E-value=2.1e-05 Score=72.08 Aligned_cols=70 Identities=17% Similarity=0.151 Sum_probs=57.0
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
++.+.+.|...|.+...+ .+...+.+.++++.+...+||++.|||++.+|+.+++.+|||.|.+|++++.
T Consensus 192 a~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp HHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred HHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 455667888899887432 2345688888888774369999999999999999999999999999998863
No 156
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.95 E-value=8.2e-05 Score=66.63 Aligned_cols=77 Identities=26% Similarity=0.296 Sum_probs=61.3
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 214 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 214 ~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
..+.++.+.++|+|+|.++...+.. ...+..++.+.++++.+ ++||++.|||++.+++.+++++|||+|.++++.+.
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 3577899999999999987532211 12234567788887776 79999999999999999999999999999998763
No 157
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.91 E-value=9.2e-05 Score=68.82 Aligned_cols=86 Identities=22% Similarity=0.238 Sum_probs=69.9
Q ss_pred HHHHHHHHhcCC-cEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 018919 194 EDVKWLQTITKL-PILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 272 (349)
Q Consensus 194 ~~i~~i~~~~~~-pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 272 (349)
+.++.+++..+- +|++ .+.+.++++.+.++|+|+|.++|- +.+.+.++++.++++++|.++||| +.+
T Consensus 197 ~ai~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~~----------~~e~l~~~v~~~~~~~~I~ASGGI-t~~ 264 (296)
T 1qap_A 197 QAVEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDNF----------NTDQMREAVKRVNGQARLEVSGNV-TAE 264 (296)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESSC----------CHHHHHHHHHTTCTTCCEEECCCS-CHH
T ss_pred HHHHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCC-CHH
Confidence 457777777643 5665 567889999999999999999751 346667777777667999999999 999
Q ss_pred HHHHHHHhCCCEEEEchHH
Q 018919 273 DVFKALALGASGIFIGRPV 291 (349)
Q Consensus 273 dv~kal~~GA~~V~ig~~~ 291 (349)
.+.+..+.|+|.+.+|+..
T Consensus 265 ~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 265 TLREFAETGVDFISVGALT 283 (296)
T ss_dssp HHHHHHHTTCSEEECSHHH
T ss_pred HHHHHHHcCCCEEEEeHHH
Confidence 9999999999999999854
No 158
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.88 E-value=3.7e-05 Score=70.77 Aligned_cols=87 Identities=15% Similarity=0.128 Sum_probs=68.2
Q ss_pred HHHHHHHHhcC--CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhc---CCCcEEEecCC
Q 018919 194 EDVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGV 268 (349)
Q Consensus 194 ~~i~~i~~~~~--~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI 268 (349)
+.++.+|+..+ .++.+ .+.+.++++.+.++|+|+|.+++. ++ +.+.++++.++ .+++|.++|||
T Consensus 170 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~-------~~---~~l~~~v~~l~~~~~~~~i~AsGGI 238 (273)
T 2b7n_A 170 SFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDNL-------SV---LETKEIAAYRDAHYPFVLLEASGNI 238 (273)
T ss_dssp HHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEETC-------CH---HHHHHHHHHHHHHCTTCEEEEESSC
T ss_pred HHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECCC-------CH---HHHHHHHHHhhccCCCcEEEEECCC
Confidence 45888888764 46666 677899999999999999999762 23 44444444442 25999999999
Q ss_pred CCHHHHHHHHHhCCCEEEEchHHH
Q 018919 269 RRGTDVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 269 ~~~~dv~kal~~GA~~V~ig~~~l 292 (349)
+.+.+.+.++.|||.+.+|+.+.
T Consensus 239 -~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 239 -SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp -CTTTHHHHHTTTCSEEECTHHHH
T ss_pred -CHHHHHHHHHcCCcEEEEcHHhc
Confidence 88999999999999999999854
No 159
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.87 E-value=0.00011 Score=65.54 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=53.0
Q ss_pred HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 219 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 219 ~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
..+.-.|...|.+.. .|+. ...+.+.++++.+. ++||++.|||++++++.+++ .|||+|.+|+++..
T Consensus 147 ~~a~~~g~~~VYld~-sG~~-----~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~ 213 (228)
T 3vzx_A 147 RVSELLQLPIFYLEY-SGVL-----GDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYE 213 (228)
T ss_dssp HHHHHTTCSEEEEEC-TTSC-----CCHHHHHHHHHHCS-SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHH
T ss_pred HHHHHcCCCEEEecC-CCCc-----CCHHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhc
Confidence 334456789998876 3321 15788888888762 59999999999999998887 79999999999985
No 160
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.86 E-value=0.00054 Score=61.21 Aligned_cols=159 Identities=10% Similarity=0.098 Sum_probs=99.6
Q ss_pred HHHHHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch
Q 018919 114 VEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM 192 (349)
Q Consensus 114 ~e~i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~ 192 (349)
++.+++..| .++-+.|.. .|++.. ++...+ ++.+.+|..+.. ...
T Consensus 55 v~~lr~~~p~~~~dvhLmv-~dp~~~---i~~~~~--Ad~itvH~ea~~----------------------------~~~ 100 (227)
T 1tqx_A 55 INNLKKYTKSIFFDVHLMV-EYPEKY---VPLLKT--SNQLTFHFEALN----------------------------EDT 100 (227)
T ss_dssp HHHHGGGCSSCEEEEEEES-SCGGGG---GGGCTT--SSEEEEEGGGGT----------------------------TCH
T ss_pred HHHHHHhCCCCcEEEEEEE-cCHHHH---HHHHHh--CCEEEEeecCCc----------------------------cCH
Confidence 345555554 445566654 466632 222233 888888875421 011
Q ss_pred HHHHH---HHHHhcCCcEEEEEe-cC-HHHHHHHHHcC-CCEEEEec-CCCC-CCCCchhhHHHHHHHHHHhcCCCcEEE
Q 018919 193 DEDVK---WLQTITKLPILVKGV-LT-AEDARIAVQAG-AAGIIVSN-HGAR-QLDYVPATIMALEEVVKATQGRIPVFL 264 (349)
Q Consensus 193 ~~~i~---~i~~~~~~pv~vK~v-~~-~~~a~~a~~~G-~d~I~v~~-~gg~-~~~~~~~~~~~l~~i~~~~~~~ipvia 264 (349)
.+.++ .+|+ .+..+.+-.- .+ .+.++...+.| +|.|.+-. +.|. +....+..++-+.++++..+ +++|.+
T Consensus 101 ~~~i~~~~~i~~-~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~-~~~I~V 178 (227)
T 1tqx_A 101 ERCIQLAKEIRD-NNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK-NLNIQV 178 (227)
T ss_dssp HHHHHHHHHHHT-TTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TCEEEE
T ss_pred HHHHHHHHHHHH-cCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc-CCeEEE
Confidence 35577 7776 4666555332 23 35567777776 99996643 3221 12345667888888887764 789999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018919 265 DGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 315 (349)
Q Consensus 265 ~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~ 315 (349)
+|||. .+.+.++.++|||.+.+||+++. .+...+.++.+++.++
T Consensus 179 dGGI~-~~ti~~~~~aGAd~~V~GsaIf~------~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 179 DGGLN-IETTEISASHGANIIVAGTSIFN------AEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp ESSCC-HHHHHHHHHHTCCEEEESHHHHT------CSSHHHHHHHHHHHHH
T ss_pred ECCCC-HHHHHHHHHcCCCEEEEeHHHhC------CCCHHHHHHHHHHHHH
Confidence 99998 68999999999999999998763 1123445556655544
No 161
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.86 E-value=0.00024 Score=62.58 Aligned_cols=109 Identities=28% Similarity=0.315 Sum_probs=80.3
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV 212 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v 212 (349)
.+.+...+.++.+.+.|++.++++..++. ..+.++.+++ -++.+....+
T Consensus 22 ~~~~~~~~~~~~l~~gGv~~iel~~k~~~------------------------------~~~~i~~~~~-~~~~~gag~v 70 (207)
T 2yw3_A 22 RGGEDLLGLARVLEEEGVGALEITLRTEK------------------------------GLEALKALRK-SGLLLGAGTV 70 (207)
T ss_dssp CSCCCHHHHHHHHHHTTCCEEEEECSSTH------------------------------HHHHHHHHTT-SSCEEEEESC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCChH------------------------------HHHHHHHHhC-CCCEEEeCeE
Confidence 45666778889999999999999875431 1355777777 5667777767
Q ss_pred cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 213 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 213 ~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+.++++.|.++|+|+++..+ . +.+.+... +.. .++++. |+.|.+++.++++.|||.|.+
T Consensus 71 l~~d~~~~A~~~GAd~v~~~~-----~-----d~~v~~~~-~~~--g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 71 RSPKEAEAALEAGAAFLVSPG-----L-----LEEVAALA-QAR--GVPYLP--GVLTPTEVERALALGLSALKF 130 (207)
T ss_dssp CSHHHHHHHHHHTCSEEEESS-----C-----CHHHHHHH-HHH--TCCEEE--EECSHHHHHHHHHTTCCEEEE
T ss_pred eeHHHHHHHHHcCCCEEEcCC-----C-----CHHHHHHH-HHh--CCCEEe--cCCCHHHHHHHHHCCCCEEEE
Confidence 788999999999999996521 1 12233332 233 567665 499999999999999999998
No 162
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.83 E-value=0.00032 Score=66.00 Aligned_cols=165 Identities=16% Similarity=0.179 Sum_probs=96.9
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEec-------
Q 018919 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVL------- 213 (349)
Q Consensus 141 ~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~------- 213 (349)
-++++.+.|+|++-+++..-.. .+.+++.. ...++..+..-+..+++|+++=.+.
T Consensus 115 sve~a~~~GADAVk~lv~~g~d--~~~e~~~~----------------q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~ 176 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDVD--GDPQVNVQ----------------KQAYIERIGSECQAEDIPFFLEILTYDETISN 176 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECTT--SCHHHHHH----------------HHHHHHHHHHHHHHHTCCEEEEEEECBTTBSC
T ss_pred CHHHHHHcCCCEEEEEEEcCCC--chHHHHHH----------------HHHHHHHHHHHHHHcCCceEEEEeccCCCCCC
Confidence 3678899999999777743100 00000000 0001233444455679999875432
Q ss_pred --CH-----------HHHHHH--HHcCCCEEEEecCCCCC----C------CCchhhHHHHHHHHHHhcCCCcEE-EecC
Q 018919 214 --TA-----------EDARIA--VQAGAAGIIVSNHGARQ----L------DYVPATIMALEEVVKATQGRIPVF-LDGG 267 (349)
Q Consensus 214 --~~-----------~~a~~a--~~~G~d~I~v~~~gg~~----~------~~~~~~~~~l~~i~~~~~~~ipvi-a~GG 267 (349)
+. +-++.+ .+.|+|.+.+--.|... + +......+...++.+.. .+|++ .+||
T Consensus 177 ~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~--~~P~v~lsgG 254 (332)
T 3iv3_A 177 NSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST--DLPYIYLSAG 254 (332)
T ss_dssp TTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC--SSCEEEECTT
T ss_pred CcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC--CCCEEEECCC
Confidence 11 224556 57799999995322110 0 11122234466666554 79965 7999
Q ss_pred CCCHHHHHH----HHHhCC--CEEEEchHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 018919 268 VRRGTDVFK----ALALGA--SGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 333 (349)
Q Consensus 268 I~~~~dv~k----al~~GA--~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 333 (349)
. +.++..+ |+..|| ++|.+||.... .++..+.+.=.+..+.+|...|..+|++|+.-.
T Consensus 255 ~-~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq-------~~v~~~~~~~~~~~~~~l~~~g~~~i~~l~~v~ 318 (332)
T 3iv3_A 255 V-SAELFQETLVFAHKAGAKFNGVLCGRATWA-------GSVQVYMEEGKEAARQWLRTSGLQNINELNKVL 318 (332)
T ss_dssp C-CHHHHHHHHHHHHHHTCCCCEEEECHHHHT-------THHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHcCCCcceEEeeHHHHH-------hhhhhhccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence 8 5566654 556899 99999998753 334444444455677888888888888887543
No 163
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.83 E-value=0.00038 Score=64.99 Aligned_cols=124 Identities=23% Similarity=0.125 Sum_probs=78.1
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHH---HHHHHHhcCCcEEEEEec---
Q 018919 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDED---VKWLQTITKLPILVKGVL--- 213 (349)
Q Consensus 140 ~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~---i~~i~~~~~~pv~vK~v~--- 213 (349)
..++.+.+.|++++.+++..... . + .....+. +....+++++|+++=...
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d-~-----------~------------~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~ 167 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSD-E-----------D------------AQQRLNMVKEFNELCHSNGLLSIIEPVVRPP 167 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTT-S-----------C------------HHHHHHHHHHHHHHHHTTTCEEEEEEEECCC
T ss_pred hhHHHHHHcCCCEEEEEEEcCCC-c-----------c------------HHHHHHHHHHHHHHHHHcCCcEEEEEECCCC
Confidence 45778889999999766532100 0 0 0011333 344444579998876541
Q ss_pred ------CH----H-HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhc--CCCc-EEEecCCCCHHH----HH
Q 018919 214 ------TA----E-DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ--GRIP-VFLDGGVRRGTD----VF 275 (349)
Q Consensus 214 ------~~----~-~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~--~~ip-via~GGI~~~~d----v~ 275 (349)
++ . -++.+.+.|+|.+.+.-. . + +..+++.+.++.+... ..+| |++.||+ +.++ +.
T Consensus 168 ~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~-~---~-~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~ 241 (304)
T 1to3_A 168 RCGDKFDREQAIIDAAKELGDSGADLYKVEMP-L---Y-GKGARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVR 241 (304)
T ss_dssp SSCSCCCHHHHHHHHHHHHTTSSCSEEEECCG-G---G-GCSCHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHH
T ss_pred ccccCCChhHHHHHHHHHHHHcCCCEEEeCCC-c---C-CCCCHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHH
Confidence 11 2 378888999999988421 0 0 0014455555555511 1789 9999999 5533 77
Q ss_pred HHHHhCCCEEEEchHHHH
Q 018919 276 KALALGASGIFIGRPVVY 293 (349)
Q Consensus 276 kal~~GA~~V~ig~~~l~ 293 (349)
.++..||++|.+||.+..
T Consensus 242 ~a~~aGa~Gv~vGRaI~q 259 (304)
T 1to3_A 242 VAMEAGASGFLAGRAVWS 259 (304)
T ss_dssp HHHHTTCCEEEESHHHHG
T ss_pred HHHHcCCeEEEEehHHhC
Confidence 788899999999999875
No 164
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.81 E-value=0.00019 Score=63.84 Aligned_cols=96 Identities=21% Similarity=0.279 Sum_probs=60.9
Q ss_pred HHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCC--CCC---CCCchhhHHHHHHHHHHhcCCCcEEEecCCCC
Q 018919 196 VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG--ARQ---LDYVPATIMALEEVVKATQGRIPVFLDGGVRR 270 (349)
Q Consensus 196 i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~g--g~~---~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~ 270 (349)
++..++ .++.+++ .+.+.++.+++.+.|.+.|.+.+.- |+. ....+..++...+..+.+..++||++.|||++
T Consensus 104 ~~~a~~-~Gl~~iv-~v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~ 181 (219)
T 2h6r_A 104 INKCKN-LGLETIV-CTNNINTSKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISK 181 (219)
T ss_dssp HHHHHH-HTCEEEE-EESSSHHHHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCS
T ss_pred HHHHHH-CCCeEEE-EeCCchHHHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCc
Confidence 444444 3775554 3445556777888898888775421 111 11112112333333333334799999999999
Q ss_pred HHHHHHHHHhCCCEEEEchHHHH
Q 018919 271 GTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 271 ~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
++++.++...|||+|.||++++.
T Consensus 182 ~~~~~~~~~~gaDgvlVGsAi~~ 204 (219)
T 2h6r_A 182 GEDVKAALDLGAEGVLLASGVVK 204 (219)
T ss_dssp HHHHHHHHTTTCCCEEESHHHHT
T ss_pred HHHHHHHhhCCCCEEEEcHHHhC
Confidence 99999888899999999999985
No 165
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.80 E-value=0.00013 Score=65.52 Aligned_cols=76 Identities=25% Similarity=0.267 Sum_probs=60.2
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 214 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 214 ~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
..+.++.+.++|+|.|.+..-.+. ....+.. +.+.++++.+ ++|+++.|||++++++.+++++|||.|.+|+..+.
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~-~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAA-FGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHH-TTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCccc-ccCCChH-HHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhh
Confidence 347788999999999999742111 1122334 7788888776 79999999999999999999999999999997764
No 166
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.79 E-value=2.2e-05 Score=70.61 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=58.8
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.++|+|.|.++...... ......++.+.+++ .+ ++||++.|||++.+++.+++++|||+|++|+..+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVVDLSNAI-ENSGENLPVLEKLS-EF--AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLE 107 (241)
T ss_dssp HHHHHHHHHTTCCCEEEEEHHHHH-HCCCTTHHHHHHGG-GG--GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecccccc-cCCchhHHHHHHHH-hc--CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhh
Confidence 467889999999999997421100 01234567777776 54 79999999999999999999999999999998764
No 167
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.79 E-value=4.9e-05 Score=67.05 Aligned_cols=81 Identities=16% Similarity=0.080 Sum_probs=59.8
Q ss_pred EecCHHHHHHHHHcCCCEEEEecCCCCC---CCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 211 GVLTAEDARIAVQAGAAGIIVSNHGARQ---LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 211 ~v~~~~~a~~a~~~G~d~I~v~~~gg~~---~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+.+++++..+. .|+|+|.++.-..+. ..+.+..++.+.++.+.+..++||++.|||. ++++.+++++||++|.+
T Consensus 94 s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav 171 (210)
T 3ceu_A 94 SCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVV 171 (210)
T ss_dssp EECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEE
T ss_pred ecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEE
Confidence 457899999888 999999986421111 1112234677777766521279999999998 89999999999999999
Q ss_pred chHHHH
Q 018919 288 GRPVVY 293 (349)
Q Consensus 288 g~~~l~ 293 (349)
++.+..
T Consensus 172 ~s~i~~ 177 (210)
T 3ceu_A 172 LGDLWN 177 (210)
T ss_dssp SHHHHT
T ss_pred hHHhHc
Confidence 999864
No 168
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.76 E-value=9.2e-05 Score=71.57 Aligned_cols=97 Identities=22% Similarity=0.297 Sum_probs=69.1
Q ss_pred CCch-HHHHHHHHHhcCCcEEEEEec--CHHHHHHHHHcCCCEEEEecCCCCCCCCchh-hHHHHHHHHHHhcCCCcEEE
Q 018919 189 LGKM-DEDVKWLQTITKLPILVKGVL--TAEDARIAVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFL 264 (349)
Q Consensus 189 ~~~~-~~~i~~i~~~~~~pv~vK~v~--~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~-~~~~l~~i~~~~~~~ipvia 264 (349)
+++. .+.++++++. +.|++++... ..+.++.+.++|+|.+.+.+....+...++. .+..+.++++.. ++||++
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~ 216 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIA 216 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEE
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEE
Confidence 3444 4568888875 8899887653 3456777889999999886432111112221 455677777776 799999
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 265 DGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 265 ~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
|||.+++|+.+++.+|||+|.+|+
T Consensus 217 -ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 217 -GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp -ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred -CCcCCHHHHHHHHHcCCCEEEECC
Confidence 899999999999999999999986
No 169
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.75 E-value=4.6e-05 Score=69.39 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=59.6
Q ss_pred CHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH
Q 018919 214 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 214 ~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l 292 (349)
..+.++.+.++|+|.|.++.-..... .....++.+.++++.+ ++||++.|||++.+|+.+++++|||+|.+|+.++
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 45778999999999999965221111 1123567788777665 7999999999999999999999999999999876
No 170
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.75 E-value=0.00014 Score=65.30 Aligned_cols=75 Identities=25% Similarity=0.272 Sum_probs=59.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.++|+|.|.+..-.+.. .+.... +.+.++++.. ++|+++.|||++++++.+++++|||.|.+|+..+.
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAAF-GTGDNR-ALIAEVAQAM--DIKVELSGGIRDDDTLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHH-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCchhh-cCCChH-HHHHHHHHhc--CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhh
Confidence 366888999999999986421110 122334 7788887776 79999999999999999999999999999997653
No 171
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.74 E-value=9.8e-05 Score=66.49 Aligned_cols=125 Identities=10% Similarity=-0.005 Sum_probs=82.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc--------CCcEEEE
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT--------KLPILVK 210 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~--------~~pv~vK 210 (349)
...++.+.++|++.+.+|..... ...+.++++++.. +..+.+-
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~~-----------------------------~~~~~i~~i~~~~~~~~~~~~g~~~gv~ 132 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQYH-----------------------------DFALTIEWLAKQKTTYANQVYPVLIGAC 132 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCTT-----------------------------SHHHHHHHHTTCEEEETTEEEECEEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCcc-----------------------------cHHHHHHHHHhcccccccccCCceEEEE
Confidence 35678888999999999875421 1135677777641 4434332
Q ss_pred Ee-cCHHHHHHHHHcCCCEEEE-ecCCCC-CCCCchhhHHHHHHHHHHhcC---CCcEEEecCCCCHHHHHHHHH--hCC
Q 018919 211 GV-LTAEDARIAVQAGAAGIIV-SNHGAR-QLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALA--LGA 282 (349)
Q Consensus 211 ~v-~~~~~a~~a~~~G~d~I~v-~~~gg~-~~~~~~~~~~~l~~i~~~~~~---~ipvia~GGI~~~~dv~kal~--~GA 282 (349)
.- .++.+.......++|.|.+ +-+.|. .....+..++-+.++++.... +++|.++|||. .+.+.++.+ +||
T Consensus 133 l~p~Tp~~~l~~~l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGa 211 (237)
T 3cu2_A 133 LCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQI 211 (237)
T ss_dssp ECTTSCGGGGTTTTTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCC
T ss_pred EeCCChHHHHHHHhhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCC
Confidence 21 2443433334458998866 223221 112345566777777776632 58999999998 588999999 999
Q ss_pred CEEEEchHHHH
Q 018919 283 SGIFIGRPVVY 293 (349)
Q Consensus 283 ~~V~ig~~~l~ 293 (349)
|.+.+||+++.
T Consensus 212 d~~VvGSaIf~ 222 (237)
T 3cu2_A 212 DWLVSGSALFS 222 (237)
T ss_dssp CCEEECGGGGS
T ss_pred cEEEEeeHHhC
Confidence 99999999863
No 172
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.74 E-value=0.00071 Score=62.10 Aligned_cols=115 Identities=16% Similarity=0.255 Sum_probs=80.8
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe-cCHHH
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV-LTAED 217 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v-~~~~~ 217 (349)
.+.++..++.|+++|-+..+... |. .-.++++.+|+.+++||+.|.. .++..
T Consensus 75 ~~~A~~y~~~GA~~isvltd~~~-----------f~----------------Gs~~~l~~ir~~v~lPvl~kdfiid~~q 127 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQRR-----------FQ----------------GSLDDLDAVRASVSIPVLRKDFVVQPYQ 127 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCGGG-----------HH----------------HHHHHHHHHHHHCSSCEEEESCCCSHHH
T ss_pred HHHHHHHHHcCCCEEEEecChhh-----------cC----------------CCHHHHHHHHHhCCCCEEECccccCHHH
Confidence 46778888999999976433210 00 0046799999999999999974 67778
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
+..+.++|||+|.+...- -.+..+..+.+..+.+ .+.+++ .+++.+++.+++.+|||.+.++.
T Consensus 128 v~~A~~~GAD~VlLi~a~-----l~~~~l~~l~~~a~~l--Gl~~lv--ev~t~ee~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 128 IHEARAHGADMLLLIVAA-----LEQSVLVSMLDRTESL--GMTALV--EVHTEQEADRALKAGAKVIGVNA 190 (272)
T ss_dssp HHHHHHTTCSEEEEEGGG-----SCHHHHHHHHHHHHHT--TCEEEE--EESSHHHHHHHHHHTCSEEEEES
T ss_pred HHHHHHcCCCEEEEeccc-----CCHHHHHHHHHHHHHC--CCcEEE--EcCCHHHHHHHHHCCCCEEEECC
Confidence 899999999999984210 1122333333333333 566665 47999999999999999999984
No 173
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.72 E-value=0.00036 Score=64.45 Aligned_cols=86 Identities=26% Similarity=0.320 Sum_probs=67.9
Q ss_pred HHHHHHHhcC--CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 018919 195 DVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 272 (349)
Q Consensus 195 ~i~~i~~~~~--~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 272 (349)
.++.+|+..+ .+|.+ .+.+.++++.+.++|+|+|.+.|- ..+.++++++.++.++|+.++|||. .+
T Consensus 185 av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~~----------~~~~~k~av~~v~~~ipi~AsGGIt-~e 252 (286)
T 1x1o_A 185 AVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDNF----------PLEALREAVRRVGGRVPLEASGNMT-LE 252 (286)
T ss_dssp HHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEESC----------CHHHHHHHHHHHTTSSCEEEESSCC-HH
T ss_pred HHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCCC-HH
Confidence 4777787763 46666 667899999999999999999763 2244556666665579999999995 79
Q ss_pred HHHHHHHhCCCEEEEchHHH
Q 018919 273 DVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 273 dv~kal~~GA~~V~ig~~~l 292 (349)
.+.+..+.|+|.+.+|+.+.
T Consensus 253 ni~~~a~tGvD~IsVgs~~~ 272 (286)
T 1x1o_A 253 RAKAAAEAGVDYVSVGALTH 272 (286)
T ss_dssp HHHHHHHHTCSEEECTHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHc
Confidence 99999999999999988554
No 174
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.71 E-value=7.5e-05 Score=69.58 Aligned_cols=86 Identities=19% Similarity=0.203 Sum_probs=66.8
Q ss_pred HHHHHHHHhcC--CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhc---CCCcEEEecCC
Q 018919 194 EDVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGV 268 (349)
Q Consensus 194 ~~i~~i~~~~~--~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI 268 (349)
+.++.+|+..+ .++++ .+.+.++++.+.++|+|+|.+++. ++ +.+.++++.++ .+++|.++|||
T Consensus 185 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~-------~~---~~l~~~v~~l~~~~~~~~I~ASGGI 253 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDNF-------KP---EELHPTATVLKAQFPSVAVEASGGI 253 (299)
T ss_dssp HHHHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC-------CH---HHHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCC-------CH---HHHHHHHHHhhccCCCeeEEEECCC
Confidence 35777777764 46666 678899999999999999999762 23 44444444442 24999999999
Q ss_pred CCHHHHHHHHHhCCCEEEEchHH
Q 018919 269 RRGTDVFKALALGASGIFIGRPV 291 (349)
Q Consensus 269 ~~~~dv~kal~~GA~~V~ig~~~ 291 (349)
+.+.+.+..+.|||.+.+|+.+
T Consensus 254 -t~~ni~~~~~aGaD~i~vGs~i 275 (299)
T 2jbm_A 254 -TLDNLPQFCGPHIDVISMGMLT 275 (299)
T ss_dssp -CTTTHHHHCCTTCCEEECTHHH
T ss_pred -CHHHHHHHHHCCCCEEEEChhh
Confidence 8899999999999999999955
No 175
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.71 E-value=0.00014 Score=63.89 Aligned_cols=76 Identities=14% Similarity=0.171 Sum_probs=57.5
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+...|+..+.+.+-+......+.. ++.+.++.+.. ++|+|+.||+.+++|+.+++..||++|++|++++.
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~~g~~-~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCCSCCC-HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCcccccc-HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 356778888899877765421111112333 67777776654 79999999999999999999999999999999974
No 176
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=97.70 E-value=0.004 Score=55.51 Aligned_cols=164 Identities=18% Similarity=0.146 Sum_probs=107.6
Q ss_pred HHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchH
Q 018919 114 VEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMD 193 (349)
Q Consensus 114 ~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~ 193 (349)
++++++..+++..+|+. ..|.+.+.+.++++.+.. +-+.|-+.+... | .
T Consensus 55 i~ei~~iv~G~VS~EV~-a~d~e~mi~eA~~L~~~~-~nv~IKIP~T~e---------------G--------------l 103 (230)
T 1vpx_A 55 VKEICDLVKGPVSAEVV-SLDYEGMVREARELAQIS-EYVVIKIPMTPD---------------G--------------I 103 (230)
T ss_dssp HHHHHHHHCSCEEEECS-CCSHHHHHHHHHHHHTTC-TTEEEEEESSHH---------------H--------------H
T ss_pred HHHHHhccCCcEEEEEc-cCCHHHHHHHHHHHHHhC-CCEEEEeCCCHH---------------H--------------H
Confidence 34455555567778876 467777777777777765 445665533200 0 3
Q ss_pred HHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHh---cCCCcEEEecCCCC
Q 018919 194 EDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVRR 270 (349)
Q Consensus 194 ~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~---~~~ipvia~GGI~~ 270 (349)
+.++.+.+. ++++-+-.+.+.+.|..|.++|++.|... =||-.+.+.+....+.++.+.. +.+..|++. ++++
T Consensus 104 ~Ai~~L~~e-GI~vNvTliFS~~QA~laa~AGa~~iSpF--VgRidd~g~dG~~~v~~i~~~~~~~~~~t~iL~A-S~r~ 179 (230)
T 1vpx_A 104 KAVKTLSAE-GIKTNVTLVFSPAQAILAAKAGATYVSPF--VGRMDDLSNDGMRMLGEIVEIYNNYGFETEIIAA-SIRH 179 (230)
T ss_dssp HHHHHHHHT-TCCEEEEEECSHHHHHHHHHHTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHHTCSCEEEEB-SCCS
T ss_pred HHHHHHHHC-CCCEEEEEeCCHHHHHHHHhCCCeEEEec--cchhhhccccHHHHHHHHHHHHHHcCCCeEEEee-ccCC
Confidence 556666654 89999989999999999999999988663 2332222223344454444433 235566666 4999
Q ss_pred HHHHHHHHHhCCCEEEEchHHHHHHhhcC--HHHHHHHHHHHHH
Q 018919 271 GTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEMLRE 312 (349)
Q Consensus 271 ~~dv~kal~~GA~~V~ig~~~l~~~~~~G--~~gv~~~l~~l~~ 312 (349)
+.++.++..+|+|.+-+.-..+..+...+ .+|++.+.+.+.+
T Consensus 180 ~~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~gv~~F~~d~~~ 223 (230)
T 1vpx_A 180 PMHVVEAALMGVDIVTMPFAVLEKLFKHPMTDLGIERFMEDWKK 223 (230)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEECCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999998888765433 2455554444443
No 177
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.68 E-value=0.00083 Score=60.08 Aligned_cols=110 Identities=19% Similarity=0.160 Sum_probs=78.7
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEE--E-
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILV--K- 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~v--K- 210 (349)
++..+.++++.+++.|+.+|.++ . .++|+++|+.+++||+- |
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~--~---------------------------------~~~i~~ir~~v~~Pvig~~k~ 78 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRIE--G---------------------------------IENLRTVRPHLSVPIIGIIKR 78 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE--S---------------------------------HHHHHHHGGGCCSCEEEECBC
T ss_pred CcchHHHHHHHHHHCCCcEEEEC--C---------------------------------HHHHHHHHHhcCCCEEEEEee
Confidence 45677888889999999998752 1 36899999999999872 3
Q ss_pred E------e--cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhH-HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC
Q 018919 211 G------V--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 281 (349)
Q Consensus 211 ~------v--~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~-~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G 281 (349)
. . .+.++++.+.++|+|.|.+...... .|..+ +.+..+.+ . .+++++ .+++.+++.++..+|
T Consensus 79 ~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~-~--g~~v~~--~v~t~eea~~a~~~G 149 (229)
T 3q58_A 79 DLTGSPVRITPYLQDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRL-H--GLLAMA--DCSTVNEGISCHQKG 149 (229)
T ss_dssp CCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TCEEEE--ECSSHHHHHHHHHTT
T ss_pred cCCCCceEeCccHHHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHH-C--CCEEEE--ecCCHHHHHHHHhCC
Confidence 1 1 3457899999999999987543211 12222 33443333 2 566665 689999999999999
Q ss_pred CCEEEE
Q 018919 282 ASGIFI 287 (349)
Q Consensus 282 A~~V~i 287 (349)
||.|.+
T Consensus 150 ad~Ig~ 155 (229)
T 3q58_A 150 IEFIGT 155 (229)
T ss_dssp CSEEEC
T ss_pred CCEEEe
Confidence 999975
No 178
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.65 E-value=0.00096 Score=59.75 Aligned_cols=110 Identities=23% Similarity=0.276 Sum_probs=78.2
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEE--EE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILV--KG 211 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~v--K~ 211 (349)
++..+.++++.+++.|+.++.++ . .++|+++|+.+++||+- |-
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~--~---------------------------------~~~i~~ir~~v~~Pvig~~k~ 78 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRIE--G---------------------------------IDNLRMTRSLVSVPIIGIIKR 78 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE--S---------------------------------HHHHHHHHTTCCSCEEEECBC
T ss_pred CcchHHHHHHHHHHCCCeEEEEC--C---------------------------------HHHHHHHHHhcCCCEEEEEee
Confidence 45677888889999999987642 1 36799999999999862 31
Q ss_pred -------e--cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhH-HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC
Q 018919 212 -------V--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 281 (349)
Q Consensus 212 -------v--~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~-~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G 281 (349)
. .+.++++.+.++|+|.|.+...... .|..+ +.+..+.+ . ++++++ .+++.+++.++..+|
T Consensus 79 d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~----~p~~l~~~i~~~~~-~--g~~v~~--~v~t~eea~~a~~~G 149 (232)
T 3igs_A 79 DLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQ----RPVAVEALLARIHH-H--HLLTMA--DCSSVDDGLACQRLG 149 (232)
T ss_dssp CCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TCEEEE--ECCSHHHHHHHHHTT
T ss_pred cCCCcceEeCccHHHHHHHHHcCCCEEEECccccC----CHHHHHHHHHHHHH-C--CCEEEE--eCCCHHHHHHHHhCC
Confidence 1 3557899999999999988543211 12222 33333332 2 566665 589999999999999
Q ss_pred CCEEEE
Q 018919 282 ASGIFI 287 (349)
Q Consensus 282 A~~V~i 287 (349)
||.|.+
T Consensus 150 ad~Ig~ 155 (232)
T 3igs_A 150 ADIIGT 155 (232)
T ss_dssp CSEEEC
T ss_pred CCEEEE
Confidence 999975
No 179
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.59 E-value=0.00035 Score=64.34 Aligned_cols=87 Identities=15% Similarity=0.216 Sum_probs=69.4
Q ss_pred HHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 018919 194 EDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 272 (349)
Q Consensus 194 ~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 272 (349)
+.++++|+.. ..||.+ .+.+.++++.++++|+|.|.+.|- +.+.+.++++.+++++++.++||| +.+
T Consensus 187 ~Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn~----------~~~~l~~av~~~~~~v~ieaSGGI-t~~ 254 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDNF----------SGEDIDIAVSIARGKVALEVSGNI-DRN 254 (287)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTTCEEEEESSC-CTT
T ss_pred HHHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHhhcCCceEEEECCC-CHH
Confidence 4477777653 467777 688999999999999999999763 235677777777668999999999 558
Q ss_pred HHHHHHHhCCCEEEEchHHH
Q 018919 273 DVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 273 dv~kal~~GA~~V~ig~~~l 292 (349)
.+.++.+.|+|.+.+|....
T Consensus 255 ~i~~~a~tGVD~IsvGalt~ 274 (287)
T 3tqv_A 255 SIVAIAKTGVDFISVGAITK 274 (287)
T ss_dssp THHHHHTTTCSEEECSHHHH
T ss_pred HHHHHHHcCCCEEEEChhhc
Confidence 88888889999999997543
No 180
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.58 E-value=0.0017 Score=57.21 Aligned_cols=118 Identities=13% Similarity=0.094 Sum_probs=84.1
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEE---
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVK--- 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK--- 210 (349)
+++.+.+++++++++|++++.++ . .+.++.+++.+++|++..
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~~--~---------------------------------~~~i~~i~~~~~~pv~~~~~~ 65 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRAN--T---------------------------------KEDILAIKETVDLPVIGIVKR 65 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE--S---------------------------------HHHHHHHHHHCCSCEEEECBC
T ss_pred CCccHHHHHHHHHHCCCeeeccC--C---------------------------------HHHHHHHHHhcCCCEEeeecc
Confidence 56778889999999999997542 1 256888999899998521
Q ss_pred E-----e---cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCC
Q 018919 211 G-----V---LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 282 (349)
Q Consensus 211 ~-----v---~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA 282 (349)
. . .+.+.++.+.++|+|.|.+...-.. +......+.+.++++.+ ++++++. ++.+.+++.++..+|+
T Consensus 66 ~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~--~p~~~~~~~i~~~~~~~-~~~~v~~--~~~t~~e~~~~~~~G~ 140 (223)
T 1y0e_A 66 DYDHSDVFITATSKEVDELIESQCEVIALDATLQQ--RPKETLDELVSYIRTHA-PNVEIMA--DIATVEEAKNAARLGF 140 (223)
T ss_dssp CCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSC--CSSSCHHHHHHHHHHHC-TTSEEEE--ECSSHHHHHHHHHTTC
T ss_pred CCCccccccCCcHHHHHHHHhCCCCEEEEeeeccc--CcccCHHHHHHHHHHhC-CCceEEe--cCCCHHHHHHHHHcCC
Confidence 1 1 3467889999999999998532110 00012346677777765 3566665 6789999999999999
Q ss_pred CEEEEchHH
Q 018919 283 SGIFIGRPV 291 (349)
Q Consensus 283 ~~V~ig~~~ 291 (349)
|.++++.+.
T Consensus 141 d~i~~~~~g 149 (223)
T 1y0e_A 141 DYIGTTLHG 149 (223)
T ss_dssp SEEECTTTT
T ss_pred CEEEeCCCc
Confidence 999886543
No 181
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.57 E-value=0.0019 Score=59.31 Aligned_cols=124 Identities=19% Similarity=0.115 Sum_probs=75.7
Q ss_pred hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-
Q 018919 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV- 212 (349)
Q Consensus 135 ~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v- 212 (349)
.+.-...++.+.+.|++-|.+=+|... +... ++ .+-+. .++|+.+++..+ +..+|.|
T Consensus 99 ~e~K~~Ea~~Av~~GAdEIDmVinig~-------lk~~---~~----------g~~~~V~~eI~~v~~a~~-~~~lKVIl 157 (297)
T 4eiv_A 99 PDTVSLEAVGALKDGADEIECLIDWRR-------MNEN---VA----------DGESRIRLLVSEVKKVVG-PKTLKVVL 157 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTHH-------HHHC---HH----------HHHHHHHHHHHHHHHHHT-TSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEeeeeHHH-------Hhcc---cC----------CcHHHHHHHHHHHHHHhc-CCceEEEE
Confidence 344445667788889999876555310 1100 00 01112 466888888874 5678887
Q ss_pred ----c-CHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHh----------------------cCCCc
Q 018919 213 ----L-TAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT----------------------QGRIP 261 (349)
Q Consensus 213 ----~-~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~----------------------~~~ip 261 (349)
+ +.+. ++.+.++|+|+|..|..-+ .+.++.+.+.-+++.+ ++++-
T Consensus 158 Et~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~----~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vg 233 (297)
T 4eiv_A 158 SGGELQGGDIISRAAVAALEGGADFLQTSSGLG----ATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIG 233 (297)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHHHHHCC------------------CCE
T ss_pred ecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCC----CCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCcee
Confidence 2 3332 3567899999999875322 1223344333333333 35799
Q ss_pred EEEe-cCCCCHHHHHHHHHhCCC
Q 018919 262 VFLD-GGVRRGTDVFKALALGAS 283 (349)
Q Consensus 262 via~-GGI~~~~dv~kal~~GA~ 283 (349)
|=++ ||||+.+|+.+++.+...
T Consensus 234 vKAs~GGIrt~e~A~~~i~~~~e 256 (297)
T 4eiv_A 234 IKIEVGDVHMAETADFLMQMIFE 256 (297)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCHHHHHHHHHHHHH
Confidence 9999 999999999999995444
No 182
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.57 E-value=0.0017 Score=59.51 Aligned_cols=116 Identities=21% Similarity=0.245 Sum_probs=83.3
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe-cCHH
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV-LTAE 216 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v-~~~~ 216 (349)
..+.++..++.|+++|-+-.+... | .. -.++++.+|+.+++||+.|.. .++.
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~-----------f---------------~G-s~~~L~~ir~~v~lPVl~Kdfi~d~~ 133 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPS-----------F---------------QG-APEFLTAARQACSLPALRKDFLFDPY 133 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTT-----------T---------------CC-CHHHHHHHHHTSSSCEEEESCCCSTH
T ss_pred HHHHHHHHHHCCCCEEEEeccccc-----------c---------------CC-CHHHHHHHHHhcCCCEEECCccCCHH
Confidence 356788889999999865333211 0 00 147899999999999999984 6778
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 217 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
++..+.++|||+|.+...- + ....+..+.+....+ .+.++++ +++.+++.+++.+|++.|++..
T Consensus 134 qi~ea~~~GAD~VlLi~a~---L--~~~~l~~l~~~a~~l--Gl~~lve--vh~~eEl~~A~~~ga~iIGinn 197 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMAS---V--DDDLAKELEDTAFAL--GMDALIE--VHDEAEMERALKLSSRLLGVNN 197 (272)
T ss_dssp HHHHHHHTTCSEEEEETTT---S--CHHHHHHHHHHHHHT--TCEEEEE--ECSHHHHHHHTTSCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcccc---c--CHHHHHHHHHHHHHc--CCeEEEE--eCCHHHHHHHHhcCCCEEEECC
Confidence 8999999999999986431 1 223444444444444 5666655 4899999999999999999884
No 183
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.52 E-value=0.00051 Score=63.46 Aligned_cols=86 Identities=16% Similarity=0.152 Sum_probs=68.4
Q ss_pred HHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 018919 194 EDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 272 (349)
Q Consensus 194 ~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 272 (349)
+.++++|+.. ..||.| .+.+.++++.++++|+|.|.+.|- +.+.+.++++.+++++.+.++|||. .+
T Consensus 196 ~Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn~----------s~~~l~~av~~~~~~v~leaSGGIt-~~ 263 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDNM----------SISEIKKAVDIVNGKSVLEVSGCVN-IR 263 (300)
T ss_dssp HHHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-TT
T ss_pred HHHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHhhcCceEEEEECCCC-HH
Confidence 4477777664 466766 578999999999999999999873 2366677777776789999999994 58
Q ss_pred HHHHHHHhCCCEEEEchHH
Q 018919 273 DVFKALALGASGIFIGRPV 291 (349)
Q Consensus 273 dv~kal~~GA~~V~ig~~~ 291 (349)
.+.++.+.|+|.+.+|...
T Consensus 264 ~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 264 NVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp THHHHHTTTCSEEECGGGT
T ss_pred HHHHHHHcCCCEEEeCccc
Confidence 8888888999999999743
No 184
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.51 E-value=0.00023 Score=64.10 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=56.3
Q ss_pred CHHHHHHHHHcCC----CEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 214 TAEDARIAVQAGA----AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 214 ~~~~a~~a~~~G~----d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
+++.++...++|. -.|.+.. .|. ....+.+.++++.+. ++|+++.|||++++++.+++. |||+|.+|+
T Consensus 140 ~~~~~~~~a~~g~~~~~~~VYl~s-~G~-----~~~~~~i~~i~~~~~-~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 140 NMDDIVAYARVSELLQLPIFYLEY-SGV-----LGDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-TTS-----CCCHHHHHHHHHTCS-SSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred CHHHHHHHHHhCcccCCCEEEEeC-CCc-----cChHHHHHHHHHhcC-CCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 3577777777774 6777654 232 335778888877642 689999999999999999888 999999999
Q ss_pred HHHH
Q 018919 290 PVVY 293 (349)
Q Consensus 290 ~~l~ 293 (349)
+++.
T Consensus 212 a~v~ 215 (240)
T 1viz_A 212 AVYE 215 (240)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9985
No 185
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.48 E-value=9.8e-05 Score=68.62 Aligned_cols=86 Identities=19% Similarity=0.168 Sum_probs=54.0
Q ss_pred HHHHHHHHhcC--CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCC------CcEEEe
Q 018919 194 EDVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR------IPVFLD 265 (349)
Q Consensus 194 ~~i~~i~~~~~--~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~------ipvia~ 265 (349)
+.++.+++..+ .++++ .+.+.++++.+.++|+|+|.+++.+ .+.+.++++.+++. ++|.++
T Consensus 187 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~g~~~v~I~AS 255 (294)
T 3c2e_A 187 NAVKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDNFK----------GDGLKMCAQSLKNKWNGKKHFLLECS 255 (294)
T ss_dssp HHHHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC-------------------------------CCEEEEE
T ss_pred HHHHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhcccccCCCCeEEEEE
Confidence 35777777764 46666 5678899999999999999987621 23444544544333 999999
Q ss_pred cCCCCHHHHHHHHHhCCCEEEEchHH
Q 018919 266 GGVRRGTDVFKALALGASGIFIGRPV 291 (349)
Q Consensus 266 GGI~~~~dv~kal~~GA~~V~ig~~~ 291 (349)
||| +.+.+.+..+.|||.+.+|+.+
T Consensus 256 GGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 256 GGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp CCC-CC------CCCSCSEEECGGGT
T ss_pred CCC-CHHHHHHHHHcCCCEEEEechh
Confidence 999 8899999999999999999864
No 186
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=97.46 E-value=0.0067 Score=53.75 Aligned_cols=148 Identities=14% Similarity=0.093 Sum_probs=100.4
Q ss_pred HHHHhhCCCc--eEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch
Q 018919 115 EEVASTGPGI--RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM 192 (349)
Q Consensus 115 e~i~~~~~~~--~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~ 192 (349)
.++++..+++ ..+|+. ..|.+.+.+.++++.+.. +-+.|-+.+... |
T Consensus 44 ~ei~~~v~G~~~VS~EV~-a~d~e~mi~eA~~l~~~~-~nv~IKIP~T~e---------------G-------------- 92 (220)
T 1l6w_A 44 PQLHEAMGGQGRLFAQVM-ATTAEGMVNDALKLRSII-ADIVVKVPVTAE---------------G-------------- 92 (220)
T ss_dssp HHHHHHTTTCSEEEEECC-CSSHHHHHHHHHHHHHHS-TTCEEEEECSHH---------------H--------------
T ss_pred HHHHHhcCCCceEEEEEc-cCCHHHHHHHHHHHHHhC-CCEEEEeCCCHH---------------H--------------
Confidence 3455555566 778876 467777777777777765 335555533200 0
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHh---cCCCcEEEecCCC
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVR 269 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~---~~~ipvia~GGI~ 269 (349)
.+.++.+.+. ++++-+-.+.+.+.|..|.++|++.|... =||-.+.+.+....+.++.+.. +.+..|++. +++
T Consensus 93 l~A~~~L~~~-GI~vn~TliFS~~QA~~aa~AGa~~iSpf--vgRidd~g~~G~~~i~~~~~~y~~~~~~t~il~A-S~r 168 (220)
T 1l6w_A 93 LAAIKMLKAE-GIPTLGTAVYGAAQGLLSALAGAEYVAPY--VNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAA-SFK 168 (220)
T ss_dssp HHHHHHHHHH-TCCEEEEEECSHHHHHHHHHHTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-CCS
T ss_pred HHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHCCCeEEEec--cchhhcccccHHHHHHHHHHHHHhcCCCeEEeec-ccC
Confidence 3556666654 89999999999999999999999988764 2232222323344555554433 225566665 599
Q ss_pred CHHHHHHHHHhCCCEEEEchHHHHHHhh
Q 018919 270 RGTDVFKALALGASGIFIGRPVVYSLAA 297 (349)
Q Consensus 270 ~~~dv~kal~~GA~~V~ig~~~l~~~~~ 297 (349)
++.++.++..+|+|.+-+.-..+..+..
T Consensus 169 ~~~~v~~~~l~G~d~~Tip~~~l~~l~~ 196 (220)
T 1l6w_A 169 TPRQALDCLLAGCESITLPLDVAQQMIS 196 (220)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCeEECCHHHHHHHHc
Confidence 9999999999999999999988887654
No 187
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=97.45 E-value=0.001 Score=62.12 Aligned_cols=86 Identities=21% Similarity=0.280 Sum_probs=68.6
Q ss_pred HHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 018919 194 EDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 272 (349)
Q Consensus 194 ~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 272 (349)
+.++.+|+.. ..||.+ .+.+.++++.++++|+|.|.+.|. +.+.+.++++.++++++|.++|||. .+
T Consensus 220 ~Av~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~ieaSGGIt-~~ 287 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALENSGNIT-LD 287 (320)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-HH
T ss_pred HHHHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCCC-HH
Confidence 4477777765 356666 678999999999999999999763 2466777777776689999999996 57
Q ss_pred HHHHHHHhCCCEEEEchHH
Q 018919 273 DVFKALALGASGIFIGRPV 291 (349)
Q Consensus 273 dv~kal~~GA~~V~ig~~~ 291 (349)
.+.+..+.|+|.+.+|+..
T Consensus 288 ~I~~~a~tGVD~isvGalt 306 (320)
T 3paj_A 288 NLKECAETGVDYISVGALT 306 (320)
T ss_dssp HHHHHHTTTCSEEECTHHH
T ss_pred HHHHHHHcCCCEEEECcee
Confidence 7877777999999999843
No 188
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.44 E-value=0.00051 Score=63.57 Aligned_cols=85 Identities=26% Similarity=0.389 Sum_probs=66.2
Q ss_pred HHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 018919 194 EDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 272 (349)
Q Consensus 194 ~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 272 (349)
+.++.+|+.. ..||.+ .+.+.++++.++++|+|.|.+.|. +.+.+.++++.+.+++++.++|||. .+
T Consensus 198 ~Av~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~ieaSGGI~-~~ 265 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEVSGGVN-FD 265 (298)
T ss_dssp HHHHHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEEESSCS-TT
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCCC-HH
Confidence 4477777765 355554 478999999999999999999763 2355666666666689999999994 57
Q ss_pred HHHHHHHhCCCEEEEchH
Q 018919 273 DVFKALALGASGIFIGRP 290 (349)
Q Consensus 273 dv~kal~~GA~~V~ig~~ 290 (349)
.+.+..+.|+|.+.+|+.
T Consensus 266 ~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 266 TVRAIAETGVDRISIGAL 283 (298)
T ss_dssp THHHHHHTTCSEEECGGG
T ss_pred HHHHHHHcCCCEEEECCe
Confidence 888888899999999984
No 189
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.43 E-value=0.00019 Score=62.22 Aligned_cols=89 Identities=11% Similarity=0.139 Sum_probs=63.6
Q ss_pred HHHHHHHHhcCCcEEEEEec----CHH-HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCC
Q 018919 194 EDVKWLQTITKLPILVKGVL----TAE-DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 268 (349)
Q Consensus 194 ~~i~~i~~~~~~pv~vK~v~----~~~-~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 268 (349)
..++..++ .++..+-.... +.+ ..+...+...|++-+- . |+. ...+.++++.+ ++|||+.|+|
T Consensus 92 ~~i~~Ak~-~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiL-------P-Gi~-p~iI~~i~~~~--~~PiIaGGlI 159 (192)
T 3kts_A 92 NAIMKAKQ-HKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELL-------P-GII-PEQVQKMTQKL--HIPVIAGGLI 159 (192)
T ss_dssp HHHHHHHH-TTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEE-------C-TTC-HHHHHHHHHHH--CCCEEEESSC
T ss_pred HHHHHHHH-CCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEEC-------C-chh-HHHHHHHHHhc--CCCEEEECCc
Confidence 34555554 36666555431 222 2444556677887652 1 222 26788888877 8999999999
Q ss_pred CCHHHHHHHHHhCCCEEEEchHHHHH
Q 018919 269 RRGTDVFKALALGASGIFIGRPVVYS 294 (349)
Q Consensus 269 ~~~~dv~kal~~GA~~V~ig~~~l~~ 294 (349)
++.+|+.+|+.+||++|..++..+|.
T Consensus 160 ~~~edv~~al~aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 160 ETSEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp CSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred CCHHHHHHHHHcCCeEEEeCCHHHhC
Confidence 99999999999999999999999883
No 190
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.43 E-value=0.007 Score=56.26 Aligned_cols=178 Identities=15% Similarity=0.059 Sum_probs=103.5
Q ss_pred hHHHHHHHHHcCCeEEecCC------------CCCCHHHHHhh-------CCCceEEEE-eecCChhHHHHHHHHHHHcC
Q 018919 90 EYATARAASAAGTIMTLSSW------------STSSVEEVAST-------GPGIRFFQL-YVYKDRNVVAQLVRRAERAG 149 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~------------~~~~~e~i~~~-------~~~~~~~Ql-~~~~~~~~~~~~~~~~~~~G 149 (349)
|...|+.+.++|+..++.+. ...+++++... ...+...-+ ++..++....+.+++++++|
T Consensus 38 D~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aG 117 (305)
T 3ih1_A 38 DAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAK 117 (305)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 44788999999988765322 12356654321 122222222 11235666677888999999
Q ss_pred CCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEec----------CHHHH
Q 018919 150 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVL----------TAEDA 218 (349)
Q Consensus 150 ~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~----------~~~~a 218 (349)
+.++-|- |... |++-+-.....+.+.+- .+.|+.+++. +.++.+-... ..+.+
T Consensus 118 aagv~iE-D~~~--------------~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra 181 (305)
T 3ih1_A 118 VAAVQIE-DQQL--------------PKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERA 181 (305)
T ss_dssp CSEEEEE-CBCS--------------SCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHH
T ss_pred CcEEEEC-CCCC--------------CcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHH
Confidence 9997653 2110 11100000001122222 4567777776 6665443332 12557
Q ss_pred HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHhCCCEEEEchHHHHH
Q 018919 219 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVVYS 294 (349)
Q Consensus 219 ~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~---GGI~~~~dv~kal~~GA~~V~ig~~~l~~ 294 (349)
+...++|||.|.+- ++++.+.+.++.+.+ ++|++++ +|-.-.-.+.+.-++|.+.|..|...+++
T Consensus 182 ~ay~eAGAD~i~~e---------~~~~~~~~~~i~~~~--~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra 249 (305)
T 3ih1_A 182 NAYVKAGADAIFPE---------ALQSEEEFRLFNSKV--NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRV 249 (305)
T ss_dssp HHHHHHTCSEEEET---------TCCSHHHHHHHHHHS--CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHH
T ss_pred HHHHHcCCCEEEEc---------CCCCHHHHHHHHHHc--CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 88899999999982 234678888888888 6788753 44322223445556999999999877765
No 191
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.43 E-value=0.00081 Score=60.17 Aligned_cols=80 Identities=21% Similarity=0.244 Sum_probs=61.1
Q ss_pred HHHHHHHHHhcC-CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH
Q 018919 193 DEDVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 271 (349)
Q Consensus 193 ~~~i~~i~~~~~-~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 271 (349)
.+.|+++++.++ .-+....+.+.++++.+.++|+|+|+..+ .+.+.+..+++. ++|++. |+.|+
T Consensus 73 ~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~----------~~~~vi~~~~~~---gi~~ip--Gv~Tp 137 (232)
T 4e38_A 73 VEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG----------FNPNTVRACQEI---GIDIVP--GVNNP 137 (232)
T ss_dssp HHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS----------CCHHHHHHHHHH---TCEEEC--EECSH
T ss_pred HHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC----------CCHHHHHHHHHc---CCCEEc--CCCCH
Confidence 678999998874 44555567899999999999999996421 123344433332 688886 69999
Q ss_pred HHHHHHHHhCCCEEEE
Q 018919 272 TDVFKALALGASGIFI 287 (349)
Q Consensus 272 ~dv~kal~~GA~~V~i 287 (349)
+++.+|+++|||.|-+
T Consensus 138 tEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 138 STVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 9999999999999987
No 192
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.41 E-value=0.0012 Score=62.40 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=82.6
Q ss_pred CeEEecCCCCCCHHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcc
Q 018919 102 TIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTL 181 (349)
Q Consensus 102 ~~~~~~~~~~~~~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~ 181 (349)
.|.+++.++..+.++++....+..|+|+|...+++.+.+.++++++.|+.. .+++. .+
T Consensus 47 ~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~~v-~v~~g-----~~---------------- 104 (336)
T 1ypf_A 47 LPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGLIA-SISVG-----VK---------------- 104 (336)
T ss_dssp SSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTCCC-EEEEC-----CS----------------
T ss_pred CcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHHHHHHHHHHhcCCeE-EEeCC-----CC----------------
Confidence 466777777777777754322346788888777777777777776655421 11110 00
Q ss_pred cccCCCCCCchHHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcC--CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCC
Q 018919 182 KNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTAEDARIAVQAG--AAGIIVSNHGARQLDYVPATIMALEEVVKATQGR 259 (349)
Q Consensus 182 ~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G--~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ 259 (349)
.+.+ +.++.+.++| ++.|.+....| .....++.+.++++.. +
T Consensus 105 -----------~~~~-------------------~~a~~~~~~g~~~~~i~i~~~~G----~~~~~~~~i~~lr~~~--~ 148 (336)
T 1ypf_A 105 -----------EDEY-------------------EFVQQLAAEHLTPEYITIDIAHG----HSNAVINMIQHIKKHL--P 148 (336)
T ss_dssp -----------HHHH-------------------HHHHHHHHTTCCCSEEEEECSSC----CSHHHHHHHHHHHHHC--T
T ss_pred -----------HHHH-------------------HHHHHHHhcCCCCCEEEEECCCC----CcHHHHHHHHHHHHhC--C
Confidence 0111 3356677888 88887743111 1234577888888876 3
Q ss_pred CcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 260 IPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 260 ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++..|.|.+.+++.++..+|||+|.++
T Consensus 149 ~~~vi~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 149 ESFVIAGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp TSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred CCEEEECCcCCHHHHHHHHHcCCCEEEEe
Confidence 34444566999999999999999999993
No 193
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=97.39 E-value=0.0045 Score=59.38 Aligned_cols=120 Identities=18% Similarity=0.095 Sum_probs=90.3
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVK 210 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK 210 (349)
.+++.+.+.++++.+.|++++.+++++ +.++ .+.++.+|+.+ +.|+.+.
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~-----------------------------~~~~~~e~v~avr~a~gd~~l~vD 196 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR-----------------------------GEKLDLEITAAVRGEIGDARLRLD 196 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS-----------------------------CHHHHHHHHHHHHTTSTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC-----------------------------CHHHHHHHHHHHHHHcCCcEEEEe
Confidence 467777788888889999999988753 1122 46799999888 5788776
Q ss_pred Ee--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CC
Q 018919 211 GV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 283 (349)
Q Consensus 211 ~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~ 283 (349)
.- -+.++ ++.+.+.|++.|-= . ..+..++.+.++++.+ ++||++++.+.+..|+.++++.| +|
T Consensus 197 ~n~~~~~~~a~~~~~~l~~~~i~~iEq-------P-~~~~~~~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~~~~~d 266 (384)
T 2pgw_A 197 ANEGWSVHDAINMCRKLEKYDIEFIEQ-------P-TVSWSIPAMAHVREKV--GIPIVADQAAFTLYDVYEICRQRAAD 266 (384)
T ss_dssp CTTCCCHHHHHHHHHHHGGGCCSEEEC-------C-SCTTCHHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHTTCCS
T ss_pred cCCCCCHHHHHHHHHHHHhcCCCEEeC-------C-CChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcCCCC
Confidence 42 34444 45567789988741 1 1234678888888877 79999999999999999999976 89
Q ss_pred EEEEchHH
Q 018919 284 GIFIGRPV 291 (349)
Q Consensus 284 ~V~ig~~~ 291 (349)
.|++....
T Consensus 267 ~v~ik~~~ 274 (384)
T 2pgw_A 267 MICIGPRE 274 (384)
T ss_dssp EEEECHHH
T ss_pred EEEEcchh
Confidence 99997654
No 194
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.39 E-value=0.0014 Score=65.78 Aligned_cols=81 Identities=16% Similarity=0.088 Sum_probs=60.4
Q ss_pred ecCHHHHHHHHHcC---CCEEEEecCCCCC--CCC--chhhHHHHHHHHHHhc----CCCcEEEecCCCCHHHHHHHHH-
Q 018919 212 VLTAEDARIAVQAG---AAGIIVSNHGARQ--LDY--VPATIMALEEVVKATQ----GRIPVFLDGGVRRGTDVFKALA- 279 (349)
Q Consensus 212 v~~~~~a~~a~~~G---~d~I~v~~~gg~~--~~~--~~~~~~~l~~i~~~~~----~~ipvia~GGI~~~~dv~kal~- 279 (349)
+.++++++.+.+.| +|+|.++.-..+. .+. .+..++.+.++.+.+. .++|+++.||| +.+++.+.++
T Consensus 115 ~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~ 193 (540)
T 3nl6_A 115 VGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQ 193 (540)
T ss_dssp ECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHh
Confidence 47899999999999 9999986422221 111 1223566666666541 37999999999 7899999998
Q ss_pred -------hCCCEEEEchHHHH
Q 018919 280 -------LGASGIFIGRPVVY 293 (349)
Q Consensus 280 -------~GA~~V~ig~~~l~ 293 (349)
.||++|.++++++.
T Consensus 194 ~~~~g~~~GadgvAVvsaI~~ 214 (540)
T 3nl6_A 194 CVSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp CBCTTSSCBCSCEEESHHHHT
T ss_pred hcccccccCceEEEEeHHHhc
Confidence 89999999999873
No 195
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=97.39 E-value=0.0011 Score=59.13 Aligned_cols=40 Identities=30% Similarity=0.526 Sum_probs=35.2
Q ss_pred HHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 254 KATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 254 ~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
+....+++|+..|||.++.|+..+...|+|++.||++++.
T Consensus 171 r~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~ 210 (225)
T 1hg3_A 171 KKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTK 210 (225)
T ss_dssp HHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHC
Confidence 3334579999999999999998888899999999999986
No 196
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.37 E-value=0.00025 Score=65.40 Aligned_cols=86 Identities=23% Similarity=0.204 Sum_probs=66.1
Q ss_pred HHHHHHHHhcC--CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcC---CCcEEEecCC
Q 018919 194 EDVKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGV 268 (349)
Q Consensus 194 ~~i~~i~~~~~--~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~---~ipvia~GGI 268 (349)
..++.+|+..+ .+|.+ .+.+.++++.++++|+|.|.+.|- +.+.+.++++.+++ ++++.++|||
T Consensus 181 ~av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn~----------~~e~l~~av~~l~~~~~~v~ieASGGI 249 (285)
T 1o4u_A 181 RAVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDNL----------SPEEVKDISRRIKDINPNVIVEVSGGI 249 (285)
T ss_dssp HHHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred HHHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCceEEEECCC
Confidence 34777777653 56776 578899999999999999999762 23445555554433 7999999999
Q ss_pred CCHHHHHHHHHhCCCEEEEchHH
Q 018919 269 RRGTDVFKALALGASGIFIGRPV 291 (349)
Q Consensus 269 ~~~~dv~kal~~GA~~V~ig~~~ 291 (349)
. .+.+.+..+.|+|.+.+|+..
T Consensus 250 t-~eni~~~a~tGVD~IsvGslt 271 (285)
T 1o4u_A 250 T-EENVSLYDFETVDVISSSRLT 271 (285)
T ss_dssp C-TTTGGGGCCTTCCEEEEGGGT
T ss_pred C-HHHHHHHHHcCCCEEEEeHHH
Confidence 4 588888888999999999854
No 197
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=97.32 E-value=0.006 Score=54.20 Aligned_cols=147 Identities=19% Similarity=0.102 Sum_probs=99.6
Q ss_pred HHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHH
Q 018919 116 EVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDED 195 (349)
Q Consensus 116 ~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (349)
++++..+++..+|+. ..|.+.+.+.++++.+.. +-+.|-+.+... | .+.
T Consensus 54 ~i~~~v~G~VS~EV~-a~d~e~~i~eA~~l~~~~-~nv~IKIP~T~e---------------G--------------l~A 102 (223)
T 1wx0_A 54 AICETVGGPVSAEVT-ALEAEAMVAEGRRLAAIH-PNIVVKLPTTEE---------------G--------------LKA 102 (223)
T ss_dssp HHHHHHTSCEEEECC-CSSHHHHHHHHHHHHHHC-TTEEEEEESSHH---------------H--------------HHH
T ss_pred HHHhccCCcEEEEEe-cCCHHHHHHHHHHHHhhC-CCEEEEeCCCHH---------------H--------------HHH
Confidence 344444566778876 467777777777777765 445665533200 0 345
Q ss_pred HHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHh---cCCCcEEEecCCCCHH
Q 018919 196 VKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRGT 272 (349)
Q Consensus 196 i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~---~~~ipvia~GGI~~~~ 272 (349)
++.+.+. ++++-+-.+.+.+.+..|.++|++.|... =||-.+.+.+....+.++.+.. +.+..|++. ++|++.
T Consensus 103 ~~~L~~~-GI~vN~TliFS~~Qa~~aa~AGa~~iSpF--VgRidd~g~~G~~~v~~i~~~~~~~~~~t~vl~A-S~r~~~ 178 (223)
T 1wx0_A 103 CKRLSAE-GIKVNMTLIFSANQALLAARAGASYVSPF--LGRVDDISWDGGELLREIVEMIQVQDLPVKVIAA-SIRHPR 178 (223)
T ss_dssp HHHHHHT-TCCEEEEEECSHHHHHHHHHTTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHTTCSCEEEEB-CCCSHH
T ss_pred HHHHHHC-CCcEEEEEeCCHHHHHHHHHCCCeEEEec--cchHhhcCCCHHHHHHHHHHHHHHcCCCeEEeec-ccCCHH
Confidence 6666554 89999999999999999999999987663 2332223333445555555443 224556655 699999
Q ss_pred HHHHHHHhCCCEEEEchHHHHHHhh
Q 018919 273 DVFKALALGASGIFIGRPVVYSLAA 297 (349)
Q Consensus 273 dv~kal~~GA~~V~ig~~~l~~~~~ 297 (349)
++.++..+|+|.+-+.-..+..+..
T Consensus 179 ~v~~~~l~G~d~~Tip~~~l~~l~~ 203 (223)
T 1wx0_A 179 HVTEAALLGADIATMPHAVFKQLLK 203 (223)
T ss_dssp HHHHHHHTTCSEEEECHHHHHHHTC
T ss_pred HHHHHHHhCCCEEECCHHHHHHHHc
Confidence 9999999999999999888877654
No 198
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=97.30 E-value=0.00093 Score=61.63 Aligned_cols=86 Identities=14% Similarity=0.184 Sum_probs=64.8
Q ss_pred HHHHHHHHhcC-CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcC---CCcEEEecCCC
Q 018919 194 EDVKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVR 269 (349)
Q Consensus 194 ~~i~~i~~~~~-~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~---~ipvia~GGI~ 269 (349)
+.++.+|+..+ .||.+ .+.+.++++.++++|+|.|.+.|- +.+.+.++++.+++ ++++.++|||
T Consensus 183 ~av~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn~----------~~~~~~~~v~~l~~~~~~v~ieaSGGI- 250 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDNF----------AVWQTQTAVQRRDSRAPTVMLESSGGL- 250 (284)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEETC----------CHHHHHHHHHHHHHHCTTCEEEEESSC-
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCeEEEEECCC-
Confidence 34777777652 36766 677899999999999999999762 12334444444333 7999999999
Q ss_pred CHHHHHHHHHhCCCEEEEchHH
Q 018919 270 RGTDVFKALALGASGIFIGRPV 291 (349)
Q Consensus 270 ~~~dv~kal~~GA~~V~ig~~~ 291 (349)
+.+.+.+..+.|+|.+.+|+..
T Consensus 251 t~~~i~~~a~tGVD~isvG~l~ 272 (284)
T 1qpo_A 251 SLQTAATYAETGVDYLAVGALT 272 (284)
T ss_dssp CTTTHHHHHHTTCSEEECGGGT
T ss_pred CHHHHHHHHhcCCCEEEECHHH
Confidence 5689989999999999999854
No 199
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.27 E-value=0.0017 Score=61.91 Aligned_cols=89 Identities=22% Similarity=0.266 Sum_probs=68.0
Q ss_pred HHHHHHHHHhcCCcEEEEEec-CHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH
Q 018919 193 DEDVKWLQTITKLPILVKGVL-TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 271 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~-~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 271 (349)
.+.++++++...+|+.+.... +.+.++.+.++|+|.|++....|. .....+.+.++++.+ ++||++ |.+.+.
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~----~~~~~~~i~~i~~~~--~~~Viv-g~v~t~ 156 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTE 156 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCS----BHHHHHHHHHHHHHC--CCEEEE-EEECSH
T ss_pred HHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCC----cHHHHHHHHHHHHhc--CCcEEE-ccCCCH
Confidence 466888888778898876643 378899999999999988532221 122346677777766 688887 678999
Q ss_pred HHHHHHHHhCCCEEEEc
Q 018919 272 TDVFKALALGASGIFIG 288 (349)
Q Consensus 272 ~dv~kal~~GA~~V~ig 288 (349)
+++.++..+|||+|.+|
T Consensus 157 e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 157 EATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCcCEEEEe
Confidence 99999999999999995
No 200
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.23 E-value=0.00075 Score=60.89 Aligned_cols=74 Identities=19% Similarity=0.285 Sum_probs=59.5
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l 292 (349)
+.|+...+.|+|.+.+-.-.+. ..+.+...+.+.++++.+ .+|+...|||++-+|+.++|.+||+-|.+|+..+
T Consensus 35 ~~a~~~~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~ 108 (243)
T 4gj1_A 35 KKFKEYEKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEV--SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI 108 (243)
T ss_dssp HHHHHHHHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHC--CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT
T ss_pred HHHHHHHHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhc--CCCeEeccccccHHHHHHHHHcCCCEEEEccccc
Confidence 6788889999999987532110 123345678888888877 7999999999999999999999999999999654
No 201
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.20 E-value=0.0036 Score=54.22 Aligned_cols=102 Identities=16% Similarity=0.201 Sum_probs=71.8
Q ss_pred HHHcCCeEEecCCCCCCHHHHHhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCC
Q 018919 97 ASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTL 175 (349)
Q Consensus 97 a~~~G~~~~~~~~~~~~~e~i~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~ 175 (349)
+...+..+++|+... -+..+.. +...+|=+.--|.......++.+.+...|++++ +..+ +
T Consensus 78 ~~~~~pdGIIsTk~~----~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEi-LPGi--------------~ 138 (192)
T 3kts_A 78 CTEICPDGIISTRGN----AIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIEL-LPGI--------------I 138 (192)
T ss_dssp HHTTCCSEEEESCHH----HHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEE-ECTT--------------C
T ss_pred HhCCCCCEEEeCcHH----HHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEE-CCch--------------h
Confidence 345678888876532 2222211 444444333467666677788888888999886 2111 0
Q ss_pred CCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEecC
Q 018919 176 PPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSNH 234 (349)
Q Consensus 176 p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~~~ 234 (349)
-+.++++++.+++||++.| +.+.|++..|+++||++|+.|+.
T Consensus 139 -----------------p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 139 -----------------PEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp -----------------HHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred -----------------HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 2679999999999999988 57999999999999999999874
No 202
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=97.18 E-value=0.0051 Score=58.69 Aligned_cols=118 Identities=18% Similarity=0.146 Sum_probs=89.0
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK 210 (349)
+++.+.+.++++.+.|++++.++++++ +++. .+.++.+|+.+ +++|.++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~----------------------------~~~~~~e~v~avr~a~G~d~~l~vD 197 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP----------------------------DLKEDVDRVSALREHLGDSFPLMVD 197 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS----------------------------SHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC----------------------------CHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 677777888888899999999987642 1222 56799999887 6889887
Q ss_pred Ee--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CC
Q 018919 211 GV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 283 (349)
Q Consensus 211 ~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~ 283 (349)
.- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..|+.++++.| +|
T Consensus 198 an~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~~~d 267 (371)
T 2ovl_A 198 ANMKWTVDGAIRAARALAPFDLHWIEE--------PTIPDDLVGNARIVRES--GHTIAGGENLHTLYDFHNAVRAGSLT 267 (371)
T ss_dssp CTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHH--CSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHcCCCC
Confidence 53 34444 45566788887631 11234577888888877 79999999999999999999976 89
Q ss_pred EEEEch
Q 018919 284 GIFIGR 289 (349)
Q Consensus 284 ~V~ig~ 289 (349)
.|++..
T Consensus 268 ~v~ik~ 273 (371)
T 2ovl_A 268 LPEPDV 273 (371)
T ss_dssp EECCCT
T ss_pred EEeeCc
Confidence 999865
No 203
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.17 E-value=0.00084 Score=59.44 Aligned_cols=86 Identities=21% Similarity=0.196 Sum_probs=61.1
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHhCCCEEEEchHHHHH
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFIGRPVVYS 294 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~-~~dv~kal~~GA~~V~ig~~~l~~ 294 (349)
+.++.+.++|+|+++++.+ ..+.+..+++.++ + .++.++||+. +.+..+++..|||.+.+||+++.+
T Consensus 119 ~~a~~a~~~G~~GvV~sat----------~~~e~~~ir~~~~-~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a 186 (215)
T 3ve9_A 119 YLREVARRVNPKGFVAPAT----------RPSMISRVKGDFP-D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQS 186 (215)
T ss_dssp HHHHHHHHHCCSEEECCTT----------SHHHHHHHHHHCT-T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHHHHcCCCceeeCCC----------CHHHHHHHHHhCC-C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCC
Confidence 5578888999999988532 1345666777664 4 6889999985 236777889999999999999852
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHHHH
Q 018919 295 LAAEGEKGVRRVLEMLREEFELAMA 319 (349)
Q Consensus 295 ~~~~G~~gv~~~l~~l~~el~~~m~ 319 (349)
+.....++.++++++....
T Consensus 187 ------~dp~~a~~~i~~~i~~~~~ 205 (215)
T 3ve9_A 187 ------ADPVRKLEEIVRSQEEVLS 205 (215)
T ss_dssp ------SSHHHHHHHHHHHHHHHC-
T ss_pred ------CCHHHHHHHHHHHHHHHHH
Confidence 2233456777777766543
No 204
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=97.16 E-value=0.0068 Score=53.79 Aligned_cols=110 Identities=18% Similarity=0.176 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEE--E-E--
Q 018919 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILV--K-G-- 211 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~v--K-~-- 211 (349)
...+.++.+.+.|++++.++ . .+.++.+|+.+++|++- | .
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~--~---------------------------------~~~i~~i~~~~~~p~i~~~~~~~~ 81 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN--S---------------------------------VRDIKEIQAITDLPIIGIIKKDYP 81 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE--S---------------------------------HHHHHHHHTTCCSCEEEECBCCCT
T ss_pred hHHHHHHHHHHCCCcEeecC--C---------------------------------HHHHHHHHHhCCCCEEeeEcCCCC
Confidence 66788899999999998653 2 14688888888999841 1 1
Q ss_pred -----e-cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEE
Q 018919 212 -----V-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGI 285 (349)
Q Consensus 212 -----v-~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V 285 (349)
+ .+.+.++.+.++|+|.|.+...-....+ +....+.+.++++..+ +++|+. ++++.+++.++...|||.|
T Consensus 82 ~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~-~~~~~~~i~~i~~~~~-~~~v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 82 PQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHD-GLDIASFIRQVKEKYP-NQLLMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp TSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTT-CCCHHHHHHHHHHHCT-TCEEEE--ECSSHHHHHHHHHTTCSEE
T ss_pred ccccccCChHHHHHHHHHcCCCEEEEcccccCCCC-CccHHHHHHHHHHhCC-CCeEEE--eCCCHHHHHHHHHcCCCEE
Confidence 1 2458899999999999988643211010 1123567777777653 566554 6899999999999999999
No 205
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=97.15 E-value=0.0026 Score=60.49 Aligned_cols=119 Identities=16% Similarity=0.182 Sum_probs=88.9
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++++.++++++ +++. .+.++.+|+.+ ++|+.+
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~----------------------------~~~~~~e~v~avr~a~g~~~~l~v 194 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYP----------------------------ALDQDLAVVRSIRQAVGDDFGIMV 194 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCS----------------------------SHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC----------------------------CHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4566677778888889999999987642 1222 56799999887 688888
Q ss_pred EEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
+.- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..|+.+++..| +
T Consensus 195 Dan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPI~~de~~~~~~~~~~~i~~~~~ 264 (359)
T 1mdl_A 195 DYNQSLDVPAAIKRSQALQQEGVTWIEE--------PTLQHDYEGHQRIQSKL--NVPVQMGENWLGPEEMFKALSIGAC 264 (359)
T ss_dssp ECTTCSCHHHHHHHHHHHHHHTCSCEEC--------CSCTTCHHHHHHHHHTC--SSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ECCCCCCHHHHHHHHHHHHHhCCCeEEC--------CCChhhHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 753 34444 46677889987731 11234577888888766 79999999999999999999976 8
Q ss_pred CEEEEch
Q 018919 283 SGIFIGR 289 (349)
Q Consensus 283 ~~V~ig~ 289 (349)
|.|++..
T Consensus 265 d~v~ik~ 271 (359)
T 1mdl_A 265 RLAMPDA 271 (359)
T ss_dssp SEECCBT
T ss_pred CEEeecc
Confidence 9999964
No 206
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=97.14 E-value=0.00056 Score=62.26 Aligned_cols=120 Identities=16% Similarity=0.135 Sum_probs=82.1
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe-cCHHH
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV-LTAED 217 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v-~~~~~ 217 (349)
.+.++.++++|+.++.+-..||. |+|..- |+ .+ +.+ .++|+.+++.+++||+.|.. ....+
T Consensus 21 ~eqa~iae~aGa~av~~l~~~p~------d~r~~g----Gv-~R----m~d---p~~I~~I~~aVsIPVm~k~righ~~E 82 (291)
T 3o07_A 21 PEQAKIAEKSGACAVMALESIPA------DMRKSG----KV-CR----MSD---PKMIKDIMNSVSIPVMAKVRIGHFVE 82 (291)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHH------HHHTTT----CC-CC----CCC---HHHHHHHHTTCSSCEEEEEETTCHHH
T ss_pred HHHHHHHHHhCchhhhhccCCCc------hhhhcC----Cc-cc----cCC---HHHHHHHHHhCCCCeEEEEecCcHHH
Confidence 45788899999999998888873 333111 10 00 112 47899999999999999986 46789
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
|+.+.++|+|.|.-+. .-+. .+....+.+. ..++|+++ |+++-++++.++..||+.|..
T Consensus 83 Aqilea~GaD~IDese-vltp-------ad~~~~I~k~-~f~vpfv~--~~~~l~EAlrri~eGA~mIrT 141 (291)
T 3o07_A 83 AQIIEALEVDYIDESE-VLTP-------ADWTHHIEKD-KFKVPFVC--GAKDLGEALRRINEGAAMIRT 141 (291)
T ss_dssp HHHHHHTTCSEEEEET-TSCC-------SCSSCCCCGG-GCSSCEEE--EESSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEeccc-CCCH-------HHHHHHhhhh-cCCCcEEe--eCCCHHHHHHHHHCCCCEEEe
Confidence 9999999999996552 1111 0111111111 01567774 589999999999999998875
No 207
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=97.12 E-value=0.0049 Score=56.54 Aligned_cols=122 Identities=18% Similarity=0.245 Sum_probs=80.8
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKG 211 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~ 211 (349)
+.+.+.+.++.+.++|++++++..=.+ |... .+.++++.+.. ++++.+--
T Consensus 109 E~~~M~~dI~~~~~~GAdGvVfG~L~~----------------------------dg~iD~~~~~~Li~~a~~l~vTFHR 160 (287)
T 3iwp_A 109 EIEVMKADIRLAKLYGADGLVFGALTE----------------------------DGHIDKELCMSLMAICRPLPVTFHR 160 (287)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCBCT----------------------------TSCBCHHHHHHHHHHHTTSCEEECG
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeeCC----------------------------CCCcCHHHHHHHHHHcCCCcEEEEC
Confidence 345577888889999999998764221 1112 34455554443 56666543
Q ss_pred e----cCHH-HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-hCCCEE
Q 018919 212 V----LTAE-DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGI 285 (349)
Q Consensus 212 v----~~~~-~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~-~GA~~V 285 (349)
. .++. -.+.+.++|+|.|-.|+. .......++.|.++.+..+++++|++.|||+. +.+.+.++ +|++.+
T Consensus 161 AFD~~~d~~~Ale~Li~lGvdrILTSG~----~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~-~Ni~~l~~~tG~~~~ 235 (287)
T 3iwp_A 161 AFDMVHDPMAALETLLTLGFERVLTSGC----DSSALEGLPLIKRLIEQAKGRIVVMPGGGITD-RNLQRILEGSGATEF 235 (287)
T ss_dssp GGGGCSCHHHHHHHHHHHTCSEEEECTT----SSSTTTTHHHHHHHHHHHTTSSEEEECTTCCT-TTHHHHHHHHCCSEE
T ss_pred chhccCCHHHHHHHHHHcCCCEEECCCC----CCChHHhHHHHHHHHHHhCCCCEEEECCCcCH-HHHHHHHHhhCCCEE
Confidence 2 2343 356788889999988542 12234456777777777666899999999986 67777776 899887
Q ss_pred EEc
Q 018919 286 FIG 288 (349)
Q Consensus 286 ~ig 288 (349)
=..
T Consensus 236 H~S 238 (287)
T 3iwp_A 236 HCS 238 (287)
T ss_dssp EEC
T ss_pred eEC
Confidence 654
No 208
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=97.08 E-value=0.02 Score=50.95 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=49.7
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH-HHHHHHHHhCCCEEEEchHHHHHH
Q 018919 217 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVYSL 295 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-~dv~kal~~GA~~V~ig~~~l~~~ 295 (349)
.++.+.++|+++++++.+ ..+.+.++++.++.+.++ .++||+-. .+. ++++.|||.+.+||+++.+
T Consensus 142 ~a~~a~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a- 208 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPST----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLA- 208 (228)
T ss_dssp HHHHHHHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTS-
T ss_pred HHHHHHHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCC-
Confidence 467788999999987431 134566777776544655 78888753 367 8889999999999997632
Q ss_pred hhcCHHHHHHHHHHHHHHHHH
Q 018919 296 AAEGEKGVRRVLEMLREEFEL 316 (349)
Q Consensus 296 ~~~G~~gv~~~l~~l~~el~~ 316 (349)
+.....++.++++++.
T Consensus 209 -----~dp~~a~~~~~~~~~~ 224 (228)
T 3m47_A 209 -----DNPAAAAAGAIESIKD 224 (228)
T ss_dssp -----SCHHHHHHHHHHHC--
T ss_pred -----CCHHHHHHHHHHHHHH
Confidence 1223455566665543
No 209
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.07 E-value=0.0017 Score=58.03 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=48.5
Q ss_pred cCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 224 AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 224 ~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.|...|.+-. .|. +...+.+.++++.. .++|+++.|||++++++.+++. |||+|.+|+++..
T Consensus 158 ~g~~~vY~e~-sG~-----~g~~~~v~~ir~~~-~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 158 YRLPVMYIEY-SGI-----YGDVSKVQAVSEHL-TETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp TCCSEEEEEC-TTS-----CCCHHHHHHHHTTC-SSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH
T ss_pred cCCCEEEEec-CCC-----cCCHHHHHHHHHhc-CCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec
Confidence 4788888755 332 12467777777654 2689999999999999987776 9999999999985
No 210
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=97.01 E-value=0.0024 Score=56.74 Aligned_cols=88 Identities=14% Similarity=0.155 Sum_probs=62.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH-HHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.++.+.++|+|+++++.+ ..+.+..+++.++ + -++.++||+-. .+..+++..|||.+.||||++.
T Consensus 125 ~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~ 192 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYN 192 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcC
Confidence 45688899999999998532 1245666666664 4 57889999853 2566788899999999999985
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 018919 294 SLAAEGEKGVRRVLEMLREEFELAMAL 320 (349)
Q Consensus 294 ~~~~~G~~gv~~~l~~l~~el~~~m~~ 320 (349)
+ +......+.++++++.....
T Consensus 193 A------~dP~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 193 A------GNPLTALRTINKIIEDKVMK 213 (222)
T ss_dssp S------SSHHHHHHHHHHHHHHHHHH
T ss_pred C------CCHHHHHHHHHHHHHHHHHH
Confidence 3 22334566777777765544
No 211
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=97.00 E-value=0.039 Score=51.02 Aligned_cols=182 Identities=20% Similarity=0.097 Sum_probs=100.8
Q ss_pred hHHHHHHHHHcCCeEEecCCC------------CCCHHHHH-------hhCCCceEEEE-eecCChhHHHHHHHHHHHcC
Q 018919 90 EYATARAASAAGTIMTLSSWS------------TSSVEEVA-------STGPGIRFFQL-YVYKDRNVVAQLVRRAERAG 149 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~~------------~~~~e~i~-------~~~~~~~~~Ql-~~~~~~~~~~~~~~~~~~~G 149 (349)
|...|+.+.++|+..++.+.. ..+++++. +..+.|...-+ ++..+.....+.+++++++|
T Consensus 28 D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aG 107 (295)
T 1s2w_A 28 NGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLVRKLEDRG 107 (295)
T ss_dssp SHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHHHHHHHcC
Confidence 447888999999887653321 12334432 22233333322 11235566677888889999
Q ss_pred CCEEEEecCCCCCCchhHHhhhhcCCCCcCccccc--CCCCCCch-HHHHHHHHHhc-CCc--EEEEEecC---------
Q 018919 150 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNF--QGLDLGKM-DEDVKWLQTIT-KLP--ILVKGVLT--------- 214 (349)
Q Consensus 150 ~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~--~~~~~~~~-~~~i~~i~~~~-~~p--v~vK~v~~--------- 214 (349)
+.++-|- |... |+..+--.. ..+.+.+. .+.|+.+++.. +.+ |+.+.-..
T Consensus 108 aagv~iE-D~~~--------------~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~a 172 (295)
T 1s2w_A 108 VAGACLE-DKLF--------------PKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEA 172 (295)
T ss_dssp CCEEEEE-CBCC----------------------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHH
T ss_pred CcEEEEC-CCCC--------------CccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHH
Confidence 9987653 2210 110000000 00111222 45566666654 333 44443211
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 294 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~ 294 (349)
.+.++...++|||.|.+- .+.++.+.+.++.+.++..+|+++.-+-....++.+.-++|.+.|.++...+.+
T Consensus 173 i~Ra~ay~eAGAd~i~~e--------~~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 244 (295)
T 1s2w_A 173 LKRAEAYRNAGADAILMH--------SKKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRA 244 (295)
T ss_dssp HHHHHHHHHTTCSEEEEC--------CCSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHHHHHHHHcCCCEEEEc--------CCCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 245788999999999982 123445777888888854599998743111123445556999999999887764
No 212
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=96.98 E-value=0.017 Score=51.13 Aligned_cols=128 Identities=17% Similarity=0.211 Sum_probs=84.6
Q ss_pred eecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcE
Q 018919 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPI 207 (349)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv 207 (349)
|...+.+.+.+-++.+++.|++++++.+=.+ |... .+.++++.+.. +.|+
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~----------------------------dg~iD~~~~~~Li~~a~~~~v 121 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTS----------------------------NNHIDTEAIEQLLPATQGLPL 121 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCT----------------------------TSSBCHHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECC----------------------------CCCcCHHHHHHHHHHhCCCeE
Confidence 5444556778888999999999998754221 1222 45566666554 6777
Q ss_pred EEEEe------cCH-HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHH-H
Q 018919 208 LVKGV------LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL-A 279 (349)
Q Consensus 208 ~vK~v------~~~-~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal-~ 279 (349)
..--. .++ +-.+.+.+.|++.|-.|+ +.........++.|.++.+..++++.|++.|||+. +.+.+.+ .
T Consensus 122 TFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG--~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~-~Ni~~l~~~ 198 (224)
T 2bdq_A 122 VFHMAFDVIPKSDQKKSIDQLVALGFTRILLHG--SSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTA-ENYQYICQE 198 (224)
T ss_dssp EECGGGGGSCTTTHHHHHHHHHHTTCCEEEECS--CSSCCCGGGGHHHHHHHHHHHTTSSEEEECSSCCT-TTHHHHHHH
T ss_pred EEECchhccCCcCHHHHHHHHHHcCCCEEECCC--CCCCCcHHHHHHHHHHHHHhhCCCeEEEeCCCCCH-HHHHHHHHh
Confidence 65432 333 335778999999998643 32211234456677777666556899999999986 6666666 4
Q ss_pred hCCCEEEEc
Q 018919 280 LGASGIFIG 288 (349)
Q Consensus 280 ~GA~~V~ig 288 (349)
+|++.+=..
T Consensus 199 tGv~e~H~s 207 (224)
T 2bdq_A 199 TGVKQAHGT 207 (224)
T ss_dssp HTCCEEEET
T ss_pred hCCCEEccc
Confidence 899988754
No 213
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=96.95 E-value=0.03 Score=49.78 Aligned_cols=88 Identities=22% Similarity=0.273 Sum_probs=57.5
Q ss_pred cCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCc----hhhHHHHHHH---HHHhcCCCcEEEecCCCCHHHHH
Q 018919 203 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYV----PATIMALEEV---VKATQGRIPVFLDGGVRRGTDVF 275 (349)
Q Consensus 203 ~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~----~~~~~~l~~i---~~~~~~~ipvia~GGI~~~~dv~ 275 (349)
.++-.++ -+-+.++.+.+...+.+.|-+-+.-- ..+| ..+.+.+.++ .+.+..+++|+..|||.++.|+.
T Consensus 113 ~GL~~iv-cVge~~e~~~~~~~~~~iIayep~wa--iGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~ 189 (226)
T 1w0m_A 113 LGLDVVV-CAPDPRTSLAAAALGPHAVAVEPPEL--IGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVA 189 (226)
T ss_dssp TTCEEEE-EESSHHHHHHHHHTCCSEEEECCGGG--TTTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHH
T ss_pred CCCEEEE-EeCCHHHHHHHhcCCCCEEEEcChhh--hccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHH
Confidence 3664444 24566666777788887555433200 0122 2223323333 33334579999999999999999
Q ss_pred HHHHhCCCEEEEchHHHH
Q 018919 276 KALALGASGIFIGRPVVY 293 (349)
Q Consensus 276 kal~~GA~~V~ig~~~l~ 293 (349)
.+...|+|++.||++++.
T Consensus 190 ~~~~~giDG~LVG~a~l~ 207 (226)
T 1w0m_A 190 AALRLGTRGVLLASAAVK 207 (226)
T ss_dssp HHHHTTCSEEEECHHHHT
T ss_pred HHHhCCCCEEEECHHHHC
Confidence 888899999999999986
No 214
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=96.94 E-value=0.21 Score=46.14 Aligned_cols=180 Identities=9% Similarity=0.076 Sum_probs=108.3
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe-----cCCCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-----SSWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~-----~~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
.|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ |++...+.+|..+ . .. -+.+..... .+...
T Consensus 9 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ 87 (300)
T 3eb2_A 9 FPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS-TSVAD 87 (300)
T ss_dssp EEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE-SSHHH
T ss_pred EEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHH
Confidence 35666777533333444555777777788876654 2334566666322 1 22 346666644 46677
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
+.++++.+++.|++++.+.. |. |.-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 88 ai~la~~a~~~Gadavlv~~--P~-----------y~~~------------~~~~l~~~f~~va~a~~lPiilYn~P~~t 142 (300)
T 3eb2_A 88 AVAQAKLYEKLGADGILAIL--EA-----------YFPL------------KDAQIESYFRAIADAVEIPVVIYTNPQFQ 142 (300)
T ss_dssp HHHHHHHHHHHTCSEEEEEE--CC-----------SSCC------------CHHHHHHHHHHHHHHCSSCEEEEECTTTC
T ss_pred HHHHHHHHHHcCCCEEEEcC--CC-----------CCCC------------CHHHHHHHHHHHHHHCCCCEEEEECcccc
Confidence 78899999999999987643 21 1101 111 256678888888999998775
Q ss_pred ---cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 ---LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 ---~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++.+.. +-+|.-+. .++..+.++.+..++++.|+.... ..++.++++|++++.-+
T Consensus 143 g~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~~G~d----~~~~~~l~~G~~G~is~ 208 (300)
T 3eb2_A 143 RSDLTLDVIARLAEHPRIRYIKDAS----------TNTGRLLSIINRCGDALQVFSASA----HIPAAVMLIGGVGWMAG 208 (300)
T ss_dssp SSCCCHHHHHHHHTSTTEEEEEECS----------SBHHHHHHHHHHHGGGSEEEECTT----SCHHHHHHTTCCEEEEG
T ss_pred CCCCCHHHHHHHHcCCCEEEEEcCC----------CCHHHHHHHHHHcCCCeEEEeCcH----HHHHHHHhCCCCEEEeC
Confidence 4567777775432 22332221 134445555555554566654222 23567899999999988
Q ss_pred hHH
Q 018919 289 RPV 291 (349)
Q Consensus 289 ~~~ 291 (349)
.+-
T Consensus 209 ~an 211 (300)
T 3eb2_A 209 PAC 211 (300)
T ss_dssp GGG
T ss_pred hhh
Confidence 753
No 215
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.94 E-value=0.019 Score=51.82 Aligned_cols=87 Identities=18% Similarity=0.199 Sum_probs=68.5
Q ss_pred HHHHHHHHHhcCCcEEEEEe-cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH
Q 018919 193 DEDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 271 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v-~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 271 (349)
.++++.+|+.+++||+-|.. .++.+...+..+|||+|.+.-.- -.+..+..+.+.+..+ .+.+++. |++.
T Consensus 93 ~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~-----L~~~~l~~l~~~A~~l--Gl~~LvE--Vh~~ 163 (258)
T 4a29_A 93 YETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLIVKI-----LTERELESLLEYARSY--GMEPLIL--INDE 163 (258)
T ss_dssp HHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGG-----SCHHHHHHHHHHHHHT--TCCCEEE--ESSH
T ss_pred HHHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehHHhh-----cCHHHHHHHHHHHHHH--hHHHHHh--cchH
Confidence 57899999999999999984 78899999999999999875321 1233455566666666 5666664 8999
Q ss_pred HHHHHHHHhCCCEEEEc
Q 018919 272 TDVFKALALGASGIFIG 288 (349)
Q Consensus 272 ~dv~kal~~GA~~V~ig 288 (349)
+++-+++.+||+.++|-
T Consensus 164 ~El~rAl~~~a~iIGIN 180 (258)
T 4a29_A 164 NDLDIALRIGARFIGIM 180 (258)
T ss_dssp HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHhcCCCcEEEEe
Confidence 99999999999999875
No 216
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.92 E-value=0.26 Score=45.83 Aligned_cols=180 Identities=14% Similarity=0.126 Sum_probs=109.3
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
.|.++.|+.-.+-.+.+.-..+++-.-+.|+.+++ ++ +...+.+|..+ . .. -+.+..... .+...
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~st~~ 105 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGS-NSTSE 105 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHH
Confidence 36667777533333444555777777788987655 22 23456665322 1 22 345666533 45667
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
+.++++.+++.|++++.+-. |. |.-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 106 ai~la~~A~~~Gadavlv~~--P~-----------y~~~------------~~~~l~~~f~~va~a~~lPiilYn~P~~t 160 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVT--PY-----------YNRP------------NQRGLYTHFSSIAKAISIPIIIYNIPSRS 160 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHHHCSSCEEEEECHHHH
T ss_pred HHHHHHHHHhcCCCEEEECC--CC-----------CCCC------------CHHHHHHHHHHHHHcCCCCEEEEeCchhh
Confidence 78899999999999987632 32 1101 111 256678888888999998765
Q ss_pred ---cCHHHHHHHHH-c-CCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 213 ---LTAEDARIAVQ-A-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 213 ---~~~~~a~~a~~-~-G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+++...++.+ . .+-+|.-+. .++..+.++.+..++++.|+ +|. ..-++.++.+||+++.-
T Consensus 161 g~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~l~~~~~~~f~v~-~G~---d~~~l~~l~~G~~G~is 226 (315)
T 3si9_A 161 VIDMAVETMRDLCRDFKNIIGVKDAT----------GKIERASEQREKCGKDFVQL-SGD---DCTALGFNAHGGVGCIS 226 (315)
T ss_dssp SCCCCHHHHHHHHHHCTTEEEEEECS----------CCTHHHHHHHHHHCSSSEEE-ESC---GGGHHHHHHTTCCEEEE
T ss_pred CCCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHHcCCCeEEE-ecC---HHHHHHHHHcCCCEEEe
Confidence 46777777776 3 233443321 12344555556565567664 442 23466789999999998
Q ss_pred chHH
Q 018919 288 GRPV 291 (349)
Q Consensus 288 g~~~ 291 (349)
+.+.
T Consensus 227 ~~an 230 (315)
T 3si9_A 227 VSSN 230 (315)
T ss_dssp SGGG
T ss_pred cHHH
Confidence 8743
No 217
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.91 E-value=0.25 Score=45.40 Aligned_cols=178 Identities=13% Similarity=0.154 Sum_probs=106.6
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+ -.+-.+.++-..+++-.-+.|+.+++ + ++...+.+|-.+ . .. .+.+..... .+-...
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS-NSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-ccHHHH
Confidence 4445555 33333445555777777788987665 2 233456665322 1 22 345566543 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+.. |. |.-| +++ ..+..+.+.+.+++||++=.+
T Consensus 85 i~la~~A~~~Gadavlv~~--P~-----------y~~~------------s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 139 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS--PY-----------YNKP------------TQEGIYQHFKAIDAASTIPIIVYNIPGRSA 139 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred HHHHHHHHHcCCCEEEEcC--CC-----------CCCC------------CHHHHHHHHHHHHHhCCCCEEEEeCccccC
Confidence 8889999999999987643 31 1101 111 145677888888999998654
Q ss_pred --cCHHHHHHHHH-c-CCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 --LTAEDARIAVQ-A-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 --~~~~~a~~a~~-~-G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++.+ . .+-+|.-+. | ++..+.++.+..++++.|+ +| +-..++.++++||++++-+
T Consensus 140 ~~l~~~~~~~La~~~pnIvgiK~s~--g--------d~~~~~~~~~~~~~~f~v~-~G---~d~~~~~~l~~G~~G~is~ 205 (292)
T 2vc6_A 140 IEIHVETLARIFEDCPNVKGVXDAT--G--------NLLRPSLERMACGEDFNLL-TG---EDGTALGYMAHGGHGCISV 205 (292)
T ss_dssp CCCCHHHHHHHHHHCTTEEEEEECS--C--------CTHHHHHHHHHSCTTSEEE-ES---CGGGHHHHHHTTCCEEEES
T ss_pred cCCCHHHHHHHHhhCCCEEEEecCC--C--------CHHHHHHHHHHcCCCEEEE-EC---chHHHHHHHHcCCCEEEec
Confidence 46777777765 3 233444321 1 2344555556555567665 45 2345678899999999988
Q ss_pred hHH
Q 018919 289 RPV 291 (349)
Q Consensus 289 ~~~ 291 (349)
.+.
T Consensus 206 ~~n 208 (292)
T 2vc6_A 206 TAN 208 (292)
T ss_dssp GGG
T ss_pred HHH
Confidence 754
No 218
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.90 E-value=0.0055 Score=54.51 Aligned_cols=111 Identities=19% Similarity=0.275 Sum_probs=81.8
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc-CCcEEEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT-KLPILVK 210 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~pv~vK 210 (349)
..+.+...+.++.+.+.|++.++++...+. -.+.++++++.+ ++-+...
T Consensus 25 ~~~~~~~~~~~~al~~gGv~~iel~~k~~~------------------------------~~~~i~~l~~~~~~l~vgaG 74 (224)
T 1vhc_A 25 LDNADDILPLADTLAKNGLSVAEITFRSEA------------------------------AADAIRLLRANRPDFLIAAG 74 (224)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTSTT------------------------------HHHHHHHHHHHCTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccCch------------------------------HHHHHHHHHHhCcCcEEeeC
Confidence 356777788899999999999999864321 135688888877 4445555
Q ss_pred EecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 211 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 211 ~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+.+.++++.|.++|||+|+.. + . +.+.+...++ . .++++. |+.|++++.+++++|||.|.+
T Consensus 75 tvl~~d~~~~A~~aGAd~v~~p---~--~-----d~~v~~~ar~-~--g~~~i~--Gv~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 75 TVLTAEQVVLAKSSGADFVVTP---G--L-----NPKIVKLCQD-L--NFPITP--GVNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp SCCSHHHHHHHHHHTCSEEECS---S--C-----CHHHHHHHHH-T--TCCEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred cEeeHHHHHHHHHCCCCEEEEC---C--C-----CHHHHHHHHH-h--CCCEEe--ccCCHHHHHHHHHCCCCEEEE
Confidence 5678899999999999999542 1 1 2333444433 4 566665 499999999999999999998
No 219
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.89 E-value=0.23 Score=45.88 Aligned_cols=181 Identities=18% Similarity=0.244 Sum_probs=107.5
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|-++.|+.-.+-.+.++-..+++-.-+.|+.+++ ++ +...+.+|-.+ . .. -+.+..... .+-..+
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~-~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS-NNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCC-CCHHHH
Confidence 5556676433323444445777777788886654 33 23456665322 1 22 345566533 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+.. |. |.-| +++ ..+..+.+.+.+++||++=.+
T Consensus 97 i~la~~A~~~Gadavlv~~--P~-----------y~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~tg 151 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVA--PY-----------YNKP------------SQEGMYQHFKAIAESTPLPVMLYNVPGRSI 151 (301)
T ss_dssp HHHHHHHHHTTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHHTCSSCEEEEECHHHHS
T ss_pred HHHHHHHHhcCCCEEEEcC--CC-----------CCCC------------CHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 8899999999999987642 31 1101 111 256677888888999998664
Q ss_pred --cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 213 --LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 213 --~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
.+++...++.+.. +-+|.-+. ..+..+.++.+..++++.|+ +|. -.-++.++.+|++++.-+.
T Consensus 152 ~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~-~G~---d~~~l~~l~~G~~G~is~~ 217 (301)
T 1xky_A 152 VQISVDTVVRLSEIENIVAIKDAG----------GDVLTMTEIIEKTADDFAVY-SGD---DGLTLPAMAVGAKGIVSVA 217 (301)
T ss_dssp SCCCHHHHHHHHTSTTEEEEEECS----------SCHHHHHHHHHHSCTTCEEE-ESS---GGGHHHHHHTTCCEEEEST
T ss_pred CCCCHHHHHHHHcCCCEEEEEcCC----------CCHHHHHHHHHhcCCCeEEE-ECc---HHHHHHHHHcCCCEEEcCH
Confidence 4667777776531 22333321 12455556666655456554 442 2347788999999999988
Q ss_pred HHHH
Q 018919 290 PVVY 293 (349)
Q Consensus 290 ~~l~ 293 (349)
+-++
T Consensus 218 an~~ 221 (301)
T 1xky_A 218 SHVI 221 (301)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6543
No 220
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.89 E-value=0.087 Score=48.69 Aligned_cols=179 Identities=15% Similarity=0.039 Sum_probs=100.1
Q ss_pred hHHHHHHHHHcCCeEEecCC-------------CCCCHHHHHh-------hCCCceEEEE-eecCChhHHHHHHHHHHHc
Q 018919 90 EYATARAASAAGTIMTLSSW-------------STSSVEEVAS-------TGPGIRFFQL-YVYKDRNVVAQLVRRAERA 148 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~-------------~~~~~e~i~~-------~~~~~~~~Ql-~~~~~~~~~~~~~~~~~~~ 148 (349)
|...|+.+.+.|+..++.+. ...+++++.. ....|...-+ ++..++....+.+++++++
T Consensus 31 D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~a 110 (298)
T 3eoo_A 31 TAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKA 110 (298)
T ss_dssp SHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHh
Confidence 34788888999987664322 1135555432 2222332222 1123666677888999999
Q ss_pred CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEEEecC----------HH
Q 018919 149 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKGVLT----------AE 216 (349)
Q Consensus 149 G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~v~~----------~~ 216 (349)
|+.++-|- |.. .|++-+-.....+.+.+- .+.|+..++.. +.++++-.... .+
T Consensus 111 Gaagv~iE-Dq~--------------~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~ 175 (298)
T 3eoo_A 111 GVGAVHLE-DQV--------------GQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIE 175 (298)
T ss_dssp TCSEEEEE-CBC--------------CCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHH
T ss_pred CCeEEEEC-CCC--------------CCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHH
Confidence 99987652 211 011100000000122221 34455555543 34444433321 24
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 217 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~---GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
-++...++|||.|.+- ++.+.+.+.++.+.+ ++|++++ +|-.-.-.+.+.-++|.+.|..|...+.
T Consensus 176 Ra~ay~~AGAD~if~~---------~~~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~r 244 (298)
T 3eoo_A 176 RAIAYVEAGADMIFPE---------AMKTLDDYRRFKEAV--KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYR 244 (298)
T ss_dssp HHHHHHHTTCSEEEEC---------CCCSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHH
T ss_pred HHHhhHhcCCCEEEeC---------CCCCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHH
Confidence 4677889999999882 234678888888888 5787664 4422112344555699999999987776
Q ss_pred H
Q 018919 294 S 294 (349)
Q Consensus 294 ~ 294 (349)
+
T Consensus 245 a 245 (298)
T 3eoo_A 245 A 245 (298)
T ss_dssp H
T ss_pred H
Confidence 5
No 221
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=96.89 E-value=0.057 Score=50.37 Aligned_cols=179 Identities=17% Similarity=0.096 Sum_probs=103.5
Q ss_pred hHHHHHHHHHcCCeEEecCCC-------------CCCHHHHH-------hhCC-CceEEEE-eecCChhHHHHHHHHHHH
Q 018919 90 EYATARAASAAGTIMTLSSWS-------------TSSVEEVA-------STGP-GIRFFQL-YVYKDRNVVAQLVRRAER 147 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~~-------------~~~~e~i~-------~~~~-~~~~~Ql-~~~~~~~~~~~~~~~~~~ 147 (349)
|...|+.+.++|+..++.+.+ ..+++++. +..+ -+...-+ ++..++....+.++++++
T Consensus 48 D~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~ 127 (318)
T 1zlp_A 48 DALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELIS 127 (318)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 447889999999887753321 13555542 2332 2222222 112367777788899999
Q ss_pred cCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCc--EEEEEec--------CH
Q 018919 148 AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLP--ILVKGVL--------TA 215 (349)
Q Consensus 148 ~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~p--v~vK~v~--------~~ 215 (349)
+|+.++-|- |... |+..+-.....+.+.+. .+.|+.+++.. +.+ |+.+.-. ..
T Consensus 128 aGaagv~iE-D~~~--------------~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai 192 (318)
T 1zlp_A 128 AGAKGVFLE-DQVW--------------PKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGI 192 (318)
T ss_dssp TTCCEEEEE-CBCS--------------SCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHH
T ss_pred cCCcEEEEC-CCCC--------------CccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHH
Confidence 999987653 2210 11111000000122222 45566666654 233 3433311 22
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEE---ecCCCCHHHHHHHHHhCCCEEEEchHHH
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL---DGGVRRGTDVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia---~GGI~~~~dv~kal~~GA~~V~ig~~~l 292 (349)
+.++...++|||.|.+- +.++.+.+.++.+.+ ++|+++ .+|-...-++.+.-++|.+.|.++...+
T Consensus 193 ~Ra~Ay~eAGAd~i~~e---------~~~~~e~~~~i~~~l--~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ 261 (318)
T 1zlp_A 193 RRANLYKEAGADATFVE---------APANVDELKEVSAKT--KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAV 261 (318)
T ss_dssp HHHHHHHHTTCSEEEEC---------CCCSHHHHHHHHHHS--CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHH
T ss_pred HHHHHHHHcCCCEEEEc---------CCCCHHHHHHHHHhc--CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 55788999999999982 245678888888888 689854 3432222334455579999999999877
Q ss_pred HH
Q 018919 293 YS 294 (349)
Q Consensus 293 ~~ 294 (349)
++
T Consensus 262 ra 263 (318)
T 1zlp_A 262 YA 263 (318)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 222
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.88 E-value=0.03 Score=53.67 Aligned_cols=206 Identities=23% Similarity=0.241 Sum_probs=111.9
Q ss_pred CCCCCcceeEcCeecC---cceeecccccccccCChhhHHHHHHHHHcCCeEEe-cCCCCCCHHHHHhhCCCceEEEEee
Q 018919 56 VSKIDMNTTVLGFKIS---MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWSTSSVEEVASTGPGIRFFQLYV 131 (349)
Q Consensus 56 ~~~~d~s~~l~g~~~~---~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~-~~~~~~~~e~i~~~~~~~~~~Ql~~ 131 (349)
...-|+.+++.+..+. .+++++|.+.. +.+.-..++++++++|+.++. +++.+.+ .| ..||-
T Consensus 124 ~~~~~t~i~i~~~~iG~~~~~~Iigpcsve---s~e~a~~~a~~~k~aGa~~vk~q~fkprt-------s~--~~f~g-- 189 (385)
T 3nvt_A 124 NKKEDTIVTVKGLPIGNGEPVFVFGPCSVE---SYEQVAAVAESIKAKGLKLIRGGAFKPRT-------SP--YDFQG-- 189 (385)
T ss_dssp TCCSCCCEEETTEEETSSSCEEEEECSBCC---CHHHHHHHHHHHHHTTCCEEECBSSCCCS-------ST--TSCCC--
T ss_pred cCCCCcEEEECCEEECCCCeEEEEEeCCcC---CHHHHHHHHHHHHHcCCCeEEcccccCCC-------Ch--HhhcC--
Confidence 3445667777776653 36777887653 334445799999999999775 3332211 12 11221
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCC-cCcccccCCCCCCchHHHHHHHHHhcCCcEEEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEDVKWLQTITKLPILVK 210 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK 210 (349)
-..+....+.+.+++.|...+.=-.|. ..-++-..+ ++- ++..++ +.+ .+.++.+. .++.||++|
T Consensus 190 -l~~egl~~L~~~~~~~Gl~~~te~~d~-----~~~~~l~~~-vd~lkIgs~~---~~n---~~LL~~~a-~~gkPVilk 255 (385)
T 3nvt_A 190 -LGLEGLKILKRVSDEYGLGVISEIVTP-----ADIEVALDY-VDVIQIGARN---MQN---FELLKAAG-RVDKPILLK 255 (385)
T ss_dssp -CTHHHHHHHHHHHHHHTCEEEEECCSG-----GGHHHHTTT-CSEEEECGGG---TTC---HHHHHHHH-TSSSCEEEE
T ss_pred -CCHHHHHHHHHHHHHcCCEEEEecCCH-----HHHHHHHhh-CCEEEECccc---ccC---HHHHHHHH-ccCCcEEEe
Confidence 123444445555566788765311111 111111111 110 011111 011 45566665 479999999
Q ss_pred Ee--cCHHHHHH----HHHcCCCEEEEecCCCCCCCC---chhhHHHHHHHHHHhcCCCcEEEe----cCCCCH--HHHH
Q 018919 211 GV--LTAEDARI----AVQAGAAGIIVSNHGARQLDY---VPATIMALEEVVKATQGRIPVFLD----GGVRRG--TDVF 275 (349)
Q Consensus 211 ~v--~~~~~a~~----a~~~G~d~I~v~~~gg~~~~~---~~~~~~~l~~i~~~~~~~ipvia~----GGI~~~--~dv~ 275 (349)
.- .++++... +.+.|.+-|++--.|.+.... ....+..++.+++.. ++||+.| +|-+.- .=..
T Consensus 256 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~--~lpV~~D~th~~G~r~~v~~~a~ 333 (385)
T 3nvt_A 256 RGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKET--HLPVMVDVTHSTGRKDLLLPCAK 333 (385)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEEEHHHHHCCGGGHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhc--CCCEEEcCCCCCCccchHHHHHH
Confidence 85 46666444 455788767665444433211 122456677776665 7899887 333332 2245
Q ss_pred HHHHhCCCEEEEchHH
Q 018919 276 KALALGASGIFIGRPV 291 (349)
Q Consensus 276 kal~~GA~~V~ig~~~ 291 (349)
.|.++||++++|-+-+
T Consensus 334 AAvA~GA~gl~iE~H~ 349 (385)
T 3nvt_A 334 AALAIEADGVMAEVHP 349 (385)
T ss_dssp HHHHTTCSEEEEEBCS
T ss_pred HHHHhCCCEEEEEecC
Confidence 6889999999998743
No 223
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=96.88 E-value=0.0029 Score=58.69 Aligned_cols=119 Identities=17% Similarity=0.161 Sum_probs=76.7
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-cCHHH
Q 018919 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV-LTAED 217 (349)
Q Consensus 140 ~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v-~~~~~ 217 (349)
+.++..+++|++++.+=-+.|.. .+ .+.++ .... .+.|+++++.+++||+.|.. ...++
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~D------i~------------~~~g~-~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide 92 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSE------LR------------NTDGV-ARSVDPLKIEEIRKCISINVLAKVRIGHFVE 92 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----------------------CCCC-CCCCCHHHHHHHHTTCCSEEEEEEETTCHHH
T ss_pred HHHHHHHHcCCCEEEEecCCCCc------ch------------hcCCc-ccCCCHHHHHHHHHhcCCCEEEeccCCcHHH
Confidence 56788899999998542132210 00 00000 0111 68899999999999999954 45889
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
++.+.++|||.|..+ .+-+ ++ +.+..+.+. ...+++++ ++++.+++.+++.+||+.|.+.
T Consensus 93 ~qil~aaGAD~Id~s-~~~~-----~~--~li~~i~~~-~~g~~vvv--~v~~~~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 93 AQILEELKVDMLDES-EVLT-----MA--DEYNHINKH-KFKTPFVC--GCTNLGEALRRISEGASMIRTK 152 (297)
T ss_dssp HHHHHHTTCSEEEEE-TTSC-----CS--CSSCCCCGG-GCSSCEEE--EESSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEcC-CCCC-----HH--HHHHHHHhc-CCCCeEEE--EeCCHHHHHHHHhCCCCEEEEC
Confidence 999999999999321 1111 10 111222221 12577877 5999999999999999999886
No 224
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.87 E-value=0.026 Score=52.38 Aligned_cols=189 Identities=15% Similarity=0.094 Sum_probs=101.8
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEecCC-------------CCCCHHHHHh-------hCC--CceEEEE-
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW-------------STSSVEEVAS-------TGP--GIRFFQL- 129 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~-------------~~~~~e~i~~-------~~~--~~~~~Ql- 129 (349)
+.+..|..+ +...|+.+.++|+..++.+. ...+++++.. ..+ .|...-+
T Consensus 25 ~~i~~~~a~--------D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d 96 (307)
T 3lye_A 25 ELIVCPGVY--------DGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMD 96 (307)
T ss_dssp CCEEEEEEC--------SHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECT
T ss_pred CeEEEecCc--------CHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECC
Confidence 355566544 44788999999988765321 1235555432 222 2322222
Q ss_pred eecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc---CC
Q 018919 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT---KL 205 (349)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~---~~ 205 (349)
++..++....+.+++++++|+.++.|- |.. . |++-+-.....+.+.+. .+.|+..++.. +.
T Consensus 97 ~Gyg~~~~v~~~v~~l~~aGaagv~iE-Dq~-~-------------~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~ 161 (307)
T 3lye_A 97 TGYGGPIMVARTVEHYIRSGVAGAHLE-DQI-L-------------TKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRS 161 (307)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCCEEEEC-CBC-C-------------CC--------CBCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHcCCeEEEEc-CCC-C-------------CcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCC
Confidence 112356666778889999999987652 211 1 11000000000122222 34455555442 45
Q ss_pred cEEEEEec------C----HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEE---ecCCCCHH
Q 018919 206 PILVKGVL------T----AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL---DGGVRRGT 272 (349)
Q Consensus 206 pv~vK~v~------~----~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia---~GGI~~~~ 272 (349)
++++-... . .+-++...++|||.|.+- ++.+.+.+.++.+.++ .+|+++ .||-...-
T Consensus 162 d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~---------~~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~ 231 (307)
T 3lye_A 162 DFVLIARTDALQSLGYEECIERLRAARDEGADVGLLE---------GFRSKEQAAAAVAALA-PWPLLLNSVENGHSPLI 231 (307)
T ss_dssp CCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEEC---------CCSCHHHHHHHHHHHT-TSCBEEEEETTSSSCCC
T ss_pred CeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEec---------CCCCHHHHHHHHHHcc-CCceeEEeecCCCCCCC
Confidence 55443331 1 233566789999999882 2345677888888874 367754 34422112
Q ss_pred HHHHHHHhCCCEEEEchHHHHH
Q 018919 273 DVFKALALGASGIFIGRPVVYS 294 (349)
Q Consensus 273 dv~kal~~GA~~V~ig~~~l~~ 294 (349)
.+.+.-++|.+.|..+...+++
T Consensus 232 t~~eL~~lGv~~v~~~~~~~ra 253 (307)
T 3lye_A 232 TVEEAKAMGFRIMIFSFATLAP 253 (307)
T ss_dssp CHHHHHHHTCSEEEEETTTHHH
T ss_pred CHHHHHHcCCeEEEEChHHHHH
Confidence 3344556899999988866653
No 225
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=96.87 E-value=0.0046 Score=56.57 Aligned_cols=40 Identities=28% Similarity=0.354 Sum_probs=35.4
Q ss_pred HHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
.+.++++|+.+++|+++.. +.++++++.+.+.|+|+++|.
T Consensus 197 ~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 197 HALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp HHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 5679999998999999865 578999999999999999995
No 226
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.86 E-value=0.29 Score=45.48 Aligned_cols=179 Identities=13% Similarity=0.062 Sum_probs=110.5
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
.|.++.|+.-..-.+.+.-..+++-.-+.|+.+++ + ++...+.+|..+ . .. -+.+++.-. .+...
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSD-LTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHH
Confidence 36677787543334445556777778888987655 2 334456665322 1 22 345666533 45667
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
+.++++.+++.|++++.+. .|.. .-| +++ ..+..+.+.+.+++||++=.+
T Consensus 108 ai~la~~A~~~Gadavlv~--~P~y-----------~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~t 162 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVL--PISY-----------WKL------------NEAEVFQHYRAVGEAIGVPVMLYNNPGTS 162 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCS-----------SCC------------CHHHHHHHHHHHHHHCSSCEEEEECHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCC-----------CCC------------CHHHHHHHHHHHHHhCCCcEEEEeCcchh
Confidence 7889999999999998763 2311 101 111 256688888888999998775
Q ss_pred ---cCHHHHHHH-HHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 213 ---LTAEDARIA-VQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 213 ---~~~~~a~~a-~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+++...++ .+.. +-+|.-+. .++..+.++.+.+++++.|+... ...++.++++|+++++-
T Consensus 163 g~~l~~~~~~~L~a~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~~G~----D~~~l~~l~~G~~G~is 228 (315)
T 3na8_A 163 GIDMSVELILRIVREVDNVTMVKEST----------GDIQRMHKLRLLGEGRVPFYNGC----NPLALEAFVAGAKGWCS 228 (315)
T ss_dssp SCCCCHHHHHHHHHHSTTEEEEEECS----------SCHHHHHHHHHHTTTCSCEEECC----GGGHHHHHHHTCSEEEE
T ss_pred CcCCCHHHHHHHHhcCCCEEEEECCC----------CCHHHHHHHHHHcCCCEEEEeCc----hHHHHHHHHCCCCEEEe
Confidence 456777776 5542 33333321 13455566666665567666433 23467889999999999
Q ss_pred chH
Q 018919 288 GRP 290 (349)
Q Consensus 288 g~~ 290 (349)
+.+
T Consensus 229 ~~a 231 (315)
T 3na8_A 229 AAP 231 (315)
T ss_dssp SGG
T ss_pred chh
Confidence 875
No 227
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.86 E-value=0.0014 Score=66.16 Aligned_cols=76 Identities=21% Similarity=0.234 Sum_probs=57.8
Q ss_pred HHHHHHHHcCCCEEEEecCCCC-CCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCH-----------HHHHHHHHhCC
Q 018919 216 EDARIAVQAGAAGIIVSNHGAR-QLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRG-----------TDVFKALALGA 282 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~-~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-----------~dv~kal~~GA 282 (349)
+.|+.+.+.|+|.+.+.+-.+. ... ......+.+.++++.+ .+||++.|||++. +++.+++.+||
T Consensus 284 ~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGa 361 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGA 361 (555)
T ss_dssp HHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchhcccccchHHHHHHHHHHcCC
Confidence 6788899999999988764331 111 1233567777776665 7999999999998 44999999999
Q ss_pred CEEEEchHHHH
Q 018919 283 SGIFIGRPVVY 293 (349)
Q Consensus 283 ~~V~ig~~~l~ 293 (349)
|.|.||+..+.
T Consensus 362 d~V~igt~~~~ 372 (555)
T 1jvn_A 362 DKVSIGTDAVY 372 (555)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECCHHhh
Confidence 99999998754
No 228
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.86 E-value=0.0056 Score=54.05 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=83.2
Q ss_pred EeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcC-CcE
Q 018919 129 LYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITK-LPI 207 (349)
Q Consensus 129 l~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~pv 207 (349)
+....+.+...+.++.+.+.|++.++++...+. -.+.++.+++.++ +-+
T Consensus 21 v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~------------------------------~~~~i~~l~~~~~~~~v 70 (214)
T 1wbh_A 21 VIVVKKLEHAVPMAKALVAGGVRVLNVTLRTEC------------------------------AVDAIRAIAKEVPEAIV 70 (214)
T ss_dssp EECCSSGGGHHHHHHHHHHTTCCEEEEESCSTT------------------------------HHHHHHHHHHHCTTSEE
T ss_pred EEECCCHHHHHHHHHHHHHcCCCEEEEeCCChh------------------------------HHHHHHHHHHHCcCCEE
Confidence 333457777788999999999999999865421 1356888888774 445
Q ss_pred EEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 208 LVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 208 ~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
....+.+.++++.|.++|||+|+..+ . +.+. .+.++.. .++++. |+.|++++.+++++|||.|.+
T Consensus 71 gagtvi~~d~~~~A~~aGAd~v~~p~-----~-----d~~v-~~~~~~~--g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 71 GAGTVLNPQQLAEVTEAGAQFAISPG-----L-----TEPL-LKAATEG--TIPLIP--GISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp EEESCCSHHHHHHHHHHTCSCEEESS-----C-----CHHH-HHHHHHS--SSCEEE--EESSHHHHHHHHHTTCCEEEE
T ss_pred eeCEEEEHHHHHHHHHcCCCEEEcCC-----C-----CHHH-HHHHHHh--CCCEEE--ecCCHHHHHHHHHCCCCEEEE
Confidence 55556788999999999999996521 1 1222 2333333 577775 499999999999999999998
No 229
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=96.82 E-value=0.14 Score=47.23 Aligned_cols=179 Identities=17% Similarity=0.167 Sum_probs=107.9
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ ++ +.+.+.+|..+ . .. -+.+..... .+...+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~a 91 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGA-NNTVEA 91 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHHH
Confidence 5666777533333444555777777788987554 32 23456665322 1 22 345666533 466677
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+.. |. |.-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 92 i~la~~a~~~Gadavlv~~--P~-----------y~~~------------~~~~l~~~f~~va~a~~lPiilYn~P~~tg 146 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVV--PY-----------YNKP------------SQEGIYQHFKTIAEATSIPMIIYNVPGRTV 146 (297)
T ss_dssp HHHHHHHHHTTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred HHHHHHHHHcCCCEEEECC--CC-----------CCCC------------CHHHHHHHHHHHHHhCCCCEEEEECCchhc
Confidence 8899999999999987632 31 1101 111 256678888888999998764
Q ss_pred --cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 213 --LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 213 --~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
.+++...++.+.. +-+|.-+ ..++..+.++.+..++++.|+ +| +..-++.++.+||+++.-+.
T Consensus 147 ~~l~~~~~~~La~~pnivgiKds----------sgd~~~~~~~~~~~~~~f~v~-~G---~d~~~l~~l~~G~~G~is~~ 212 (297)
T 3flu_A 147 VSMTNDTILRLAEIPNIVGVKEA----------SGNIGSNIELINRAPEGFVVL-SG---DDHTALPFMLCGGHGVITVA 212 (297)
T ss_dssp SCCCHHHHHHHTTSTTEEEEEEC----------SCCHHHHHHHHHHSCTTCEEE-EC---CGGGHHHHHHTTCCEEEESG
T ss_pred cCCCHHHHHHHHcCCCEEEEEeC----------CCCHHHHHHHHHhcCCCeEEE-EC---cHHHHHHHHhCCCCEEEech
Confidence 4567777766432 2233222 113455566666665566664 44 22446788999999999887
Q ss_pred HH
Q 018919 290 PV 291 (349)
Q Consensus 290 ~~ 291 (349)
+.
T Consensus 213 an 214 (297)
T 3flu_A 213 AN 214 (297)
T ss_dssp GG
T ss_pred Hh
Confidence 43
No 230
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=96.82 E-value=0.043 Score=52.13 Aligned_cols=121 Identities=9% Similarity=0.021 Sum_probs=89.0
Q ss_pred CChhHHHHHHHHHHH-cCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEE
Q 018919 133 KDRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPIL 208 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~-~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~ 208 (349)
.+++.+.+.++++.+ .|++.+.++++++ +++. .+.++.+|+.+ ++++.
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~----------------------------~~~~~~e~v~avr~a~g~~~~l~ 192 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGAR----------------------------TPAQDLEHIRSIVKAVGDRASVR 192 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSS----------------------------CHHHHHHHHHHHHHHHGGGCEEE
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCC----------------------------ChHHHHHHHHHHHHhcCCCCEEE
Confidence 467777788888888 9999999887642 1122 56788888876 47887
Q ss_pred EEEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-
Q 018919 209 VKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG- 281 (349)
Q Consensus 209 vK~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G- 281 (349)
+..- -+.++ ++.+.+.|++.|- + ...+..++.+.++++.+ ++||++++.+.+..|+.+++..|
T Consensus 193 vDan~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~ 262 (370)
T 1nu5_A 193 VDVNQGWDEQTASIWIPRLEEAGVELVE-------Q-PVPRANFGALRRLTEQN--GVAILADESLSSLSSAFELARDHA 262 (370)
T ss_dssp EECTTCCCHHHHHHHHHHHHHHTCCEEE-------C-CSCTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHHTTC
T ss_pred EECCCCCCHHHHHHHHHHHHhcCcceEe-------C-CCCcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHhCC
Confidence 7643 24444 4567778988763 1 11234577788888776 79999999999999999999986
Q ss_pred CCEEEEchHH
Q 018919 282 ASGIFIGRPV 291 (349)
Q Consensus 282 A~~V~ig~~~ 291 (349)
+|.|++--..
T Consensus 263 ~d~v~ik~~~ 272 (370)
T 1nu5_A 263 VDAFSLKLCN 272 (370)
T ss_dssp CSEEEECHHH
T ss_pred CCEEEEchhh
Confidence 8999996543
No 231
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=96.81 E-value=0.23 Score=46.06 Aligned_cols=180 Identities=18% Similarity=0.173 Sum_probs=110.1
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------hCC--CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------TGP--GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~~~--~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ ++ +...+.+|..+ ... .+.+...-. .+....
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~-~~t~~a 91 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGT-NDTRDS 91 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCC-SSHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHHH
Confidence 5667777544334555666788888888976543 33 23456665322 222 345566433 456677
Q ss_pred HHHHHHHHHcCC-CEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 139 AQLVRRAERAGF-KAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~-~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
.++++.+++.|+ +++.+.. |.. .-| +++ ..+..+.+.+.+++||++=.+
T Consensus 92 i~la~~A~~~Ga~davlv~~--P~y-----------~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~t 146 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIV--PYY-----------NKP------------SQEGMYQHFKAIADASDLPIIIYNIPGRV 146 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEEC--CCS-----------SCC------------CHHHHHHHHHHHHHSCSSCEEEEECHHHH
T ss_pred HHHHHHHHhcCCCcEEEEcC--CCC-----------CCC------------CHHHHHHHHHHHHHhCCCCEEEEeccccc
Confidence 888999999997 9987632 211 101 111 256678888888999998764
Q ss_pred ---cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 213 ---LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 213 ---~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
.+++...++.+. ..|+-. .+.. ++..+.++.+..++++.|+ +|. ...++.++.+||+++.-+.
T Consensus 147 g~~l~~~~~~~La~~--pnIvgi------Kdss--d~~~~~~~~~~~~~~f~v~-~G~---d~~~l~~l~~Ga~G~is~~ 212 (311)
T 3h5d_A 147 VVELTPETMLRLADH--PNIIGV------KECT--SLANMAYLIEHKPEEFLIY-TGE---DGDAFHAMNLGADGVISVA 212 (311)
T ss_dssp SSCCCHHHHHHHHTS--TTEEEE------EECS--CHHHHHHHHHHCCSSCEEE-ECC---GGGHHHHHHHTCCEEEEST
T ss_pred CCCCCHHHHHHHhcC--CCEEEE------EeCC--CHHHHHHHHHHcCCCEEEE-ECc---HHHHHHHHHcCCCEEEech
Confidence 466777777764 233210 1122 4556666666665556555 342 2446788999999999998
Q ss_pred HHH
Q 018919 290 PVV 292 (349)
Q Consensus 290 ~~l 292 (349)
+-+
T Consensus 213 an~ 215 (311)
T 3h5d_A 213 SHT 215 (311)
T ss_dssp HHH
T ss_pred hhh
Confidence 654
No 232
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=96.80 E-value=0.0071 Score=57.86 Aligned_cols=115 Identities=12% Similarity=0.059 Sum_probs=85.0
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++...+.++++.+.|++++.+++.+ +.++ .+.++.+|+.+ +.||.+
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------------------~~~~~~e~v~avr~a~g~d~~l~v 194 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGA-----------------------------DWQSDIDRIRACLPLLEPGEKAMA 194 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCS-----------------------------CHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC-----------------------------CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 467778888888999999999988753 1122 57799999887 488888
Q ss_pred EEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
+.- .+.+++ +.+.+.|+ .|- + .-+ .++.+.++++.+ ++||++++.+.+..|+.++++.| +
T Consensus 195 Dan~~~~~~~a~~~~~~l~~~~i-~iE-------~--P~~-~~~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~~~~~ 261 (379)
T 2rdx_A 195 DANQGWRVDNAIRLARATRDLDY-ILE-------Q--PCR-SYEECQQVRRVA--DQPMKLDECVTGLHMAQRIVADRGA 261 (379)
T ss_dssp ECTTCSCHHHHHHHHHHTTTSCC-EEE-------C--CSS-SHHHHHHHHTTC--CSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred ECCCCCCHHHHHHHHHHHHhCCe-EEe-------C--CcC-CHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 743 355554 44455666 441 1 112 677777777765 79999999999999999999976 8
Q ss_pred CEEEEch
Q 018919 283 SGIFIGR 289 (349)
Q Consensus 283 ~~V~ig~ 289 (349)
|.|++-.
T Consensus 262 d~v~ik~ 268 (379)
T 2rdx_A 262 EICCLKI 268 (379)
T ss_dssp SEEEEET
T ss_pred CEEEEec
Confidence 9999954
No 233
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.77 E-value=0.0078 Score=57.45 Aligned_cols=90 Identities=14% Similarity=0.185 Sum_probs=64.0
Q ss_pred HHHHHHHHHhcCCcEEEEEe---cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCC
Q 018919 193 DEDVKWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 269 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v---~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~ 269 (349)
.+.++++|+.-.+++.+-.. ...+.++.+.++|+|.|++....|. .....+.+.++++..+ +++|++ |.+.
T Consensus 85 ~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~----~~~~~~~I~~ik~~~p-~v~Vi~-G~v~ 158 (366)
T 4fo4_A 85 AAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAYP-HLEIIG-GNVA 158 (366)
T ss_dssp HHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHCT-TCEEEE-EEEC
T ss_pred HHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCC----CHHHHHHHHHHHHhcC-CCceEe-eeeC
Confidence 45677777653445544332 2468899999999999998543331 1234566777777653 577776 6689
Q ss_pred CHHHHHHHHHhCCCEEEEc
Q 018919 270 RGTDVFKALALGASGIFIG 288 (349)
Q Consensus 270 ~~~dv~kal~~GA~~V~ig 288 (349)
+.+++.++..+|||+|.+|
T Consensus 159 t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 159 TAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp SHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHcCCCEEEEe
Confidence 9999999999999999995
No 234
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=96.77 E-value=0.055 Score=48.56 Aligned_cols=75 Identities=24% Similarity=0.280 Sum_probs=48.8
Q ss_pred HHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH-H---------HHHHHHHhCCCEEEEchH
Q 018919 221 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-T---------DVFKALALGASGIFIGRP 290 (349)
Q Consensus 221 a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~-~---------dv~kal~~GA~~V~ig~~ 290 (349)
+.+.|.++++.+ ..+ +.++++.++ ..+++.+|||+-. . .+.+++..|||.+.+||+
T Consensus 152 ~~~~G~~g~V~~------------~~e-i~~lr~~~~-~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 217 (246)
T 2yyu_A 152 AKESGLDGVVCS------------ANE-AAFIKERCG-ASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRS 217 (246)
T ss_dssp HHHHTCCEEECC------------HHH-HHHHHHHHC-TTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHH
T ss_pred HHHhCCCEEEeC------------HHH-HHHHHHhcC-CCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHh
Confidence 456777776542 234 666666664 3459999999853 2 367788999999999999
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHH
Q 018919 291 VVYSLAAEGEKGVRRVLEMLREEFE 315 (349)
Q Consensus 291 ~l~~~~~~G~~gv~~~l~~l~~el~ 315 (349)
++.+ +...+.++.++++++
T Consensus 218 I~~a------~dp~~a~~~l~~~i~ 236 (246)
T 2yyu_A 218 LTRA------ADPLRTYARLQHEWN 236 (246)
T ss_dssp HHTS------SSHHHHHHHHHHHCC
T ss_pred hcCC------CCHHHHHHHHHHHHH
Confidence 8742 112345555555443
No 235
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=96.73 E-value=0.16 Score=46.67 Aligned_cols=178 Identities=17% Similarity=0.175 Sum_probs=106.7
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+. .+-.+.++-..+++-.-+.|+.+++ ++ +...+.+|-.+ . .. .+.+..... .+-...
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~a 84 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGG-NATHEA 84 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHH
Confidence 55566765 4434555556777777788886654 33 23456665322 1 22 345555433 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+.. |. |.-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 85 i~la~~A~~~Gadavlv~~--P~-----------y~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~tg 139 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVV--PY-----------YNKP------------TQRGLYEHFKTVAQEVDIPIIIYNIPSRTC 139 (294)
T ss_dssp HHHHHHHHHTTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred HHHHHHHHhcCCCEEEECC--CC-----------CCCC------------CHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 8889999999999987642 31 1101 111 256677888888999998664
Q ss_pred --cCHHHHHHHH-HcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 --LTAEDARIAV-QAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 --~~~~~a~~a~-~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++. +.. +-+|.-+. .++..+.++.+..++++.|+ +|. -.-++.++.+||+++.-+
T Consensus 140 ~~l~~~~~~~La~~~pnivgiKds~----------gd~~~~~~~~~~~~~~f~v~-~G~---d~~~~~~l~~G~~G~is~ 205 (294)
T 2ehh_A 140 VEISVDTMFKLASECENIVASKEST----------PNMDRISEIVKRLGESFSVL-SGD---DSLTLPMMALGAKGVISV 205 (294)
T ss_dssp CCCCHHHHHHHHHHCTTEEEEEECC----------SCHHHHHHHHHHHCTTSEEE-ESS---GGGHHHHHHTTCCEEEES
T ss_pred cCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCeEEE-ECc---HHHHHHHHHCCCCEEEeC
Confidence 4677777776 532 33333321 12445555655555466654 442 234677899999999998
Q ss_pred hHH
Q 018919 289 RPV 291 (349)
Q Consensus 289 ~~~ 291 (349)
.+-
T Consensus 206 ~an 208 (294)
T 2ehh_A 206 ANN 208 (294)
T ss_dssp GGG
T ss_pred HHH
Confidence 854
No 236
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=96.73 E-value=0.066 Score=51.49 Aligned_cols=123 Identities=13% Similarity=0.042 Sum_probs=90.3
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCC-ch-HHHHHHHHHhc--CCcEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG-KM-DEDVKWLQTIT--KLPIL 208 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~-~~-~~~i~~i~~~~--~~pv~ 208 (349)
.+++...+.++++.+.|++.+.++. +|..+ +. +. .+.++.+|+.+ +++|.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~-spvG~-------------------------~~~~~~~e~v~avr~a~G~d~~l~ 197 (401)
T 2hzg_A 144 DTPQETLERARAARRDGFAAVKFGW-GPIGR-------------------------GTVAADADQIMAAREGLGPDGDLM 197 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEES-TTTTS-------------------------SCHHHHHHHHHHHHHHHCSSSEEE
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEcC-CCCCC-------------------------CHHHHHHHHHHHHHHHhCCCCeEE
Confidence 4677777888888899999999884 33210 22 33 57799999987 68888
Q ss_pred EEEe--c--CHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHH-HhcCCCcEEEecCCCCHHHHHHHHH
Q 018919 209 VKGV--L--TAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK-ATQGRIPVFLDGGVRRGTDVFKALA 279 (349)
Q Consensus 209 vK~v--~--~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~-~~~~~ipvia~GGI~~~~dv~kal~ 279 (349)
++.- - +.++ ++.+.+.|++.|-= ...+..++.+.++++ .+ ++||++++.+.+..++.++++
T Consensus 198 vDan~~~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~~--~iPI~~dE~~~~~~~~~~~i~ 267 (401)
T 2hzg_A 198 VDVGQIFGEDVEAAAARLPTLDAAGVLWLEE--------PFDAGALAAHAALAGRGA--RVRIAGGEAAHNFHMAQHLMD 267 (401)
T ss_dssp EECTTTTTTCHHHHHTTHHHHHHTTCSEEEC--------CSCTTCHHHHHHHHTTCC--SSEEEECTTCSSHHHHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCccCHHHHHHHHhhCC--CCCEEecCCcCCHHHHHHHHH
Confidence 8753 4 6655 45677889887631 112345777777776 55 799999999999999999999
Q ss_pred hC-CCEEEEchHH
Q 018919 280 LG-ASGIFIGRPV 291 (349)
Q Consensus 280 ~G-A~~V~ig~~~ 291 (349)
.| +|.|++-...
T Consensus 268 ~~~~d~v~ik~~~ 280 (401)
T 2hzg_A 268 YGRIGFIQIDCGR 280 (401)
T ss_dssp HSCCSEEEECHHH
T ss_pred CCCCCEEEeCcch
Confidence 76 8999996543
No 237
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=96.72 E-value=0.2 Score=46.06 Aligned_cols=179 Identities=17% Similarity=0.188 Sum_probs=107.0
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|-++.|+.-.+-.+.+.-..+++-.-+.|+.+++ ++ +.+.+.+|..+ . .. .+.+..... .+....
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGA-NSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCC-CCHHHH
Confidence 5566777533333444555777777788886554 32 23456665322 1 22 345566433 456677
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+.. |.. .-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 86 i~la~~a~~~Gadavlv~~--P~y-----------~~~------------~~~~l~~~f~~ia~a~~lPiilYn~P~~tg 140 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVT--PYY-----------NKP------------TQEGLYQHYKAIAEAVELPLILYNVPGRTG 140 (291)
T ss_dssp HHHHHHHHHHTCSEEEEEC--CCS-----------SCC------------CHHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred HHHHHHHHhcCCCEEEEcC--CCC-----------CCC------------CHHHHHHHHHHHHHhcCCCEEEEecccccC
Confidence 8899999999999987632 311 101 111 256678888888999998764
Q ss_pred --cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 213 --LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 213 --~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
.+++...++.+.. +-+|.-+. .++..+.++.+..++++.|+ +|. ..-++.++.+||+++.-+.
T Consensus 141 ~~l~~~~~~~La~~pnivgiK~ss----------gd~~~~~~~~~~~~~~f~v~-~G~---d~~~~~~l~~G~~G~is~~ 206 (291)
T 3tak_A 141 VDLSNDTAVRLAEIPNIVGIKDAT----------GDVPRGKALIDALNGKMAVY-SGD---DETAWELMLLGADGNISVT 206 (291)
T ss_dssp CCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHHTTSSEEE-ECC---HHHHHHHHHTTCCEEEESG
T ss_pred CCCCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHHcCCCeEEE-ECc---HHHHHHHHHCCCCEEEech
Confidence 4567777766432 22332221 13445556666555566664 442 3456688999999999887
Q ss_pred HH
Q 018919 290 PV 291 (349)
Q Consensus 290 ~~ 291 (349)
+.
T Consensus 207 ~n 208 (291)
T 3tak_A 207 AN 208 (291)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 238
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=96.72 E-value=0.032 Score=53.62 Aligned_cols=119 Identities=13% Similarity=0.067 Sum_probs=87.8
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK 210 (349)
+++...+.++++.+.|++++.++++.+ +.++ .+.++.+|+.+ +.+|.+.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~----------------------------~~~~~~e~v~avR~avg~d~~l~vD 213 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQP----------------------------DGALDIARVTAVRKHLGDAVPLMVD 213 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCS----------------------------CHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC----------------------------CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 667777888888899999999887531 1223 57799999886 5888886
Q ss_pred Ee--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CC
Q 018919 211 GV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 283 (349)
Q Consensus 211 ~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~ 283 (349)
.- .+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..++.++++.| +|
T Consensus 214 an~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d 283 (393)
T 2og9_A 214 ANQQWDRPTAQRMCRIFEPFNLVWIEE--------PLDAYDHEGHAALALQF--DTPIATGEMLTSAAEHGDLIRHRAAD 283 (393)
T ss_dssp CTTCCCHHHHHHHHHHHGGGCCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHCCCCC
Confidence 42 34555 45566788887631 01233577788888776 79999999999999999999987 89
Q ss_pred EEEEchH
Q 018919 284 GIFIGRP 290 (349)
Q Consensus 284 ~V~ig~~ 290 (349)
.|++--.
T Consensus 284 ~v~ik~~ 290 (393)
T 2og9_A 284 YLMPDAP 290 (393)
T ss_dssp EECCCHH
T ss_pred EEeeCcc
Confidence 9988643
No 239
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=96.71 E-value=0.012 Score=56.48 Aligned_cols=118 Identities=12% Similarity=0.011 Sum_probs=87.4
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++...+.++++.+.|++++.+++... +++. .+.++.+|+.+ +++|.+
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~----------------------------~~~~~~e~v~avR~a~G~d~~l~v 199 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLD----------------------------SLSISIQFVEKVREIVGDELPLML 199 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCS----------------------------SHHHHHHHHHHHHHHHCSSSCEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCC----------------------------hHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4677777888888899999999875320 0123 57799999887 688988
Q ss_pred EEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
+.- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.+..++.++++.| +
T Consensus 200 Dan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~ 269 (391)
T 2qgy_A 200 DLAVPEDLDQTKSFLKEVSSFNPYWIEE--------PVDGENISLLTEIKNTF--NMKVVTGEKQSGLVHFRELISRNAA 269 (391)
T ss_dssp ECCCCSCHHHHHHHHHHHGGGCCSEEEC--------SSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred EcCCCCCHHHHHHHHHHHHhcCCCeEeC--------CCChhhHHHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHHcCCC
Confidence 753 34544 45566788887631 01234577888888876 79999999999999999999976 8
Q ss_pred CEEEEc
Q 018919 283 SGIFIG 288 (349)
Q Consensus 283 ~~V~ig 288 (349)
|.|++-
T Consensus 270 d~v~ik 275 (391)
T 2qgy_A 270 DIFNPD 275 (391)
T ss_dssp SEECCB
T ss_pred CEEEEC
Confidence 999984
No 240
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=96.71 E-value=0.055 Score=51.58 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=91.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++++.+++.++..+ . ..+.+. .+.++.+|+.+ ++++.+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~-----------~-----------~~~~~~~~e~v~avr~a~g~d~~l~v 205 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVS-----------W-----------APDVKMDLKACAAVREAVGPDIRLMI 205 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTST-----------T-----------CCCHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccc-----------c-----------ccchHHHHHHHHHHHHHhCCCCeEEE
Confidence 4667777888888889999999998753210 0 012233 57799999887 588888
Q ss_pred EEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHhC-
Q 018919 210 KGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALG- 281 (349)
Q Consensus 210 K~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~-~~dv~kal~~G- 281 (349)
..- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+ ..|+.++++.|
T Consensus 206 Dan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~i~~~~ 275 (382)
T 1rvk_A 206 DAFHWYSRTDALALGRGLEKLGFDWIEE--------PMDEQSLSSYKWLSDNL--DIPVVGPESAAGKHWHRAEWIKAGA 275 (382)
T ss_dssp ECCTTCCHHHHHHHHHHHHTTTCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEEECSSCSSHHHHHHHHHHTTC
T ss_pred ECCCCCCHHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHhhC--CCCEEEeCCccCcHHHHHHHHHcCC
Confidence 753 34444 45566788887631 01233577788888776 799999999999 99999999986
Q ss_pred CCEEEEchHH
Q 018919 282 ASGIFIGRPV 291 (349)
Q Consensus 282 A~~V~ig~~~ 291 (349)
+|.|++--..
T Consensus 276 ~d~v~ik~~~ 285 (382)
T 1rvk_A 276 CDILRTGVND 285 (382)
T ss_dssp CSEEEECHHH
T ss_pred CCEEeeCchh
Confidence 7999996544
No 241
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=96.70 E-value=0.39 Score=44.62 Aligned_cols=180 Identities=16% Similarity=0.158 Sum_probs=108.6
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
.|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ + ++.+.+.+|..+ . .. .+.+..... .+...
T Consensus 28 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~st~e 106 (314)
T 3qze_A 28 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGA-NSTRE 106 (314)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHH
Confidence 36667777533333444455677777788876554 2 334456665322 1 22 345565433 45667
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
+.++++.+++.|++++.+-. |.. .-| +++ ..+..+.+.+.+++||++=.+
T Consensus 107 ai~la~~A~~~Gadavlv~~--P~y-----------~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~t 161 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLVT--PYY-----------NKP------------TQEGMYQHFRHIAEAVAIPQILYNVPGRT 161 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEEC--CCS-----------SCC------------CHHHHHHHHHHHHHHSCSCEEEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcC--CCC-----------CCC------------CHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 78899999999999987632 311 101 111 256678888888999998765
Q ss_pred ---cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 ---LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 ---~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++.+.. +-+|.-+. .++..+.++.+..++++.|+ +|. ..-++.++.+||+++.-+
T Consensus 162 g~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~-~G~---d~~~l~~l~~Ga~G~is~ 227 (314)
T 3qze_A 162 SCDMLPETVERLSKVPNIIGIKEAT----------GDLQRAKEVIERVGKDFLVY-SGD---DATAVELMLLGGKGNISV 227 (314)
T ss_dssp SCCCCHHHHHHHHTSTTEEEEEECS----------CCHHHHHHHHHHSCTTSEEE-ESC---GGGHHHHHHTTCCEEEES
T ss_pred CCCCCHHHHHHHhcCCCEEEEEcCC----------CCHHHHHHHHHHcCCCeEEE-ecC---hHHHHHHHHCCCCEEEec
Confidence 4567777776532 22332221 13455566666665566664 442 234678899999999988
Q ss_pred hHH
Q 018919 289 RPV 291 (349)
Q Consensus 289 ~~~ 291 (349)
.+-
T Consensus 228 ~an 230 (314)
T 3qze_A 228 TAN 230 (314)
T ss_dssp GGG
T ss_pred HHh
Confidence 743
No 242
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.68 E-value=0.033 Score=50.28 Aligned_cols=88 Identities=20% Similarity=0.262 Sum_probs=64.8
Q ss_pred HHHHHHHHHhcCCcEEEEEe-cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH
Q 018919 193 DEDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 271 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v-~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 271 (349)
.++|+.+|+.+++||+.|.. .++.++..+..+|||+|.+...- + ...++..+.+.++.+ ++.++++ +++.
T Consensus 90 ~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~---l--~~~~l~~l~~~a~~l--Gl~~lvE--v~~~ 160 (251)
T 1i4n_A 90 PAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARI---L--TAEQIKEIYEAAEEL--GMDSLVE--VHSR 160 (251)
T ss_dssp THHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGG---S--CHHHHHHHHHHHHTT--TCEEEEE--ECSH
T ss_pred HHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEeccc---C--CHHHHHHHHHHHHHc--CCeEEEE--eCCH
Confidence 37899999999999999985 44556777999999999986431 1 122344443333334 5677766 6899
Q ss_pred HHHHHHHHh-CCCEEEEch
Q 018919 272 TDVFKALAL-GASGIFIGR 289 (349)
Q Consensus 272 ~dv~kal~~-GA~~V~ig~ 289 (349)
+++..++.+ |++.|++-.
T Consensus 161 eE~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 161 EDLEKVFSVIRPKIIGINT 179 (251)
T ss_dssp HHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEeC
Confidence 999999999 999998865
No 243
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.65 E-value=0.0044 Score=55.19 Aligned_cols=111 Identities=16% Similarity=0.211 Sum_probs=81.9
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc-CCcEEEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT-KLPILVK 210 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~pv~vK 210 (349)
..+.+...+.++.+.+.|++.++++...+. -.+.++++++.+ ++-+...
T Consensus 34 ~~~~~~~~~~~~al~~gGv~~iel~~k~~~------------------------------~~~~i~~l~~~~~~~~igag 83 (225)
T 1mxs_A 34 IAREEDILPLADALAAGGIRTLEVTLRSQH------------------------------GLKAIQVLREQRPELCVGAG 83 (225)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEESSSTH------------------------------HHHHHHHHHHHCTTSEEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCcc------------------------------HHHHHHHHHHhCcccEEeeC
Confidence 356777788899999999999999864321 135678788777 4556666
Q ss_pred EecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 211 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 211 ~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+.+.++++.|.++|+|+|+.. + . +.+ +.+.++.. .++++. |+.|++++.+++++|||.|.+
T Consensus 84 tvl~~d~~~~A~~aGAd~v~~p---~--~-----d~~-v~~~~~~~--g~~~i~--G~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 84 TVLDRSMFAAVEAAGAQFVVTP---G--I-----TED-ILEAGVDS--EIPLLP--GISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp CCCSHHHHHHHHHHTCSSEECS---S--C-----CHH-HHHHHHHC--SSCEEC--EECSHHHHHHHHTTTCCEEEE
T ss_pred eEeeHHHHHHHHHCCCCEEEeC---C--C-----CHH-HHHHHHHh--CCCEEE--eeCCHHHHHHHHHCCCCEEEE
Confidence 6778899999999999999642 1 1 122 22333334 567765 499999999999999999998
No 244
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=96.64 E-value=0.066 Score=49.57 Aligned_cols=64 Identities=20% Similarity=0.245 Sum_probs=45.9
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH----------HHHHHHHhCCCEE
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGI 285 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~----------dv~kal~~GA~~V 285 (349)
+.|+.+.++|+|+++.+.+ .+..+++.++ .-.++.++||+-.. .+.+++.+|||.+
T Consensus 162 ~lA~~a~~~G~dGvV~s~~-------------E~~~IR~~~~-~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~i 227 (303)
T 3ru6_A 162 NFSKISYENGLDGMVCSVF-------------ESKKIKEHTS-SNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYI 227 (303)
T ss_dssp HHHHHHHHTTCSEEECCTT-------------THHHHHHHSC-TTSEEEECCCCTTC--------CCSHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEECHH-------------HHHHHHHhCC-CccEEECCCcCcccCCcccccccCCHHHHHHcCCCEE
Confidence 3567788999999877432 1345566654 33488899999332 3557788999999
Q ss_pred EEchHHHH
Q 018919 286 FIGRPVVY 293 (349)
Q Consensus 286 ~ig~~~l~ 293 (349)
.+||+++.
T Consensus 228 VvGr~I~~ 235 (303)
T 3ru6_A 228 VVGRPIYK 235 (303)
T ss_dssp EECHHHHT
T ss_pred EEChHHhC
Confidence 99999874
No 245
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=96.61 E-value=0.032 Score=53.05 Aligned_cols=120 Identities=16% Similarity=0.183 Sum_probs=86.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++.+.++++. +++. .+.++.+|+.+ ++++.+
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------------------~~~~~~e~v~avr~a~g~~~~l~v 190 (369)
T 2p8b_A 140 ADPENMAEEAASMIQKGYQSFKMKVGT-----------------------------NVKEDVKRIEAVRERVGNDIAIRV 190 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCS-----------------------------CHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CChHHHHHHHHHHHHcCcCEEEEEeCC-----------------------------CHHHHHHHHHHHHHHhCCCCeEEE
Confidence 467777788888889999999988753 1122 56789999887 578877
Q ss_pred EEe--cCHHHHH-H----HHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-
Q 018919 210 KGV--LTAEDAR-I----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG- 281 (349)
Q Consensus 210 K~v--~~~~~a~-~----a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G- 281 (349)
..- -+.+++. . +.+.|++.|- + ...+..++.+.++++.+ ++||++++.+.+..++.+++..|
T Consensus 191 Dan~~~~~~~a~~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~~ 260 (369)
T 2p8b_A 191 DVNQGWKNSANTLTALRSLGHLNIDWIE-------Q-PVIADDIDAMAHIRSKT--DLPLMIDEGLKSSREMRQIIKLEA 260 (369)
T ss_dssp ECTTTTBSHHHHHHHHHTSTTSCCSCEE-------C-CBCTTCHHHHHHHHHTC--CSCEEESTTCCSHHHHHHHHHHTC
T ss_pred ECCCCCCHHHHHHHHHHHHHhCCCcEEE-------C-CCCcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHhCC
Confidence 643 2345554 3 3445666552 1 11234577788887766 79999999999999999999976
Q ss_pred CCEEEEchHH
Q 018919 282 ASGIFIGRPV 291 (349)
Q Consensus 282 A~~V~ig~~~ 291 (349)
+|.|++-...
T Consensus 261 ~d~v~ik~~~ 270 (369)
T 2p8b_A 261 ADKVNIKLMK 270 (369)
T ss_dssp CSEEEECHHH
T ss_pred CCEEEeecch
Confidence 8999997543
No 246
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=96.60 E-value=0.013 Score=56.17 Aligned_cols=120 Identities=14% Similarity=0.061 Sum_probs=87.7
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc--CCcEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~--~~pv~vK 210 (349)
.+++...+.++++.+.|++.+.++++++ +.++.+.++.+|+.+ +++|.++
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~----------------------------~~~~~e~v~avr~a~g~d~~l~vD 214 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPVA----------------------------DDGPAAEIANLRQVLGPQAKIAAD 214 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGC----------------------------TTCHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCCC----------------------------ChHHHHHHHHHHHHhCCCCEEEEE
Confidence 4677777888888899999999987531 111136688888877 6888887
Q ss_pred Ee--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CC
Q 018919 211 GV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 283 (349)
Q Consensus 211 ~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~ 283 (349)
.- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..++.++++.| +|
T Consensus 215 an~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~~~d 284 (388)
T 2nql_A 215 MHWNQTPERALELIAEMQPFDPWFAEA--------PVWTEDIAGLEKVSKNT--DVPIAVGEEWRTHWDMRARIERCRIA 284 (388)
T ss_dssp CCSCSCHHHHHHHHHHHGGGCCSCEEC--------CSCTTCHHHHHHHHTSC--CSCEEECTTCCSHHHHHHHHTTSCCS
T ss_pred CCCCCCHHHHHHHHHHHhhcCCCEEEC--------CCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcCCCC
Confidence 43 34444 45566788887631 11234577777777765 79999999999999999999976 89
Q ss_pred EEEEchH
Q 018919 284 GIFIGRP 290 (349)
Q Consensus 284 ~V~ig~~ 290 (349)
.|++-..
T Consensus 285 ~v~ik~~ 291 (388)
T 2nql_A 285 IVQPEMG 291 (388)
T ss_dssp EECCCHH
T ss_pred EEEecCC
Confidence 9998543
No 247
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=96.57 E-value=0.13 Score=47.38 Aligned_cols=177 Identities=16% Similarity=0.156 Sum_probs=107.5
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+.-. -.+.+.-..+++-.-+.|+.+++ + ++...+.+|..+ . .. -+.+..... .+-...
T Consensus 9 ~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~a 86 (292)
T 3daq_A 9 VALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGT-NDTEKS 86 (292)
T ss_dssp EECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHH
T ss_pred EeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCc-ccHHHH
Confidence 5566676433 33445555777777788986654 2 334456665322 1 22 345666533 456677
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+.. |. |.-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 87 i~la~~a~~~Gadavlv~~--P~-----------y~~~------------~~~~l~~~f~~ia~a~~lPiilYn~P~~tg 141 (292)
T 3daq_A 87 IQASIQAKALGADAIMLIT--PY-----------YNKT------------NQRGLVKHFEAIADAVKLPVVLYNVPSRTN 141 (292)
T ss_dssp HHHHHHHHHHTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHHHHCSCEEEEECHHHHS
T ss_pred HHHHHHHHHcCCCEEEECC--CC-----------CCCC------------CHHHHHHHHHHHHHhCCCCEEEEecccccC
Confidence 8899999999999987642 21 1101 111 256678888888999998764
Q ss_pred --cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 --LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 --~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~-~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++.+.. +-+|.-+ ..++..+.++.+..++ ++.|+ +|. ...++.++++||++++-+
T Consensus 142 ~~l~~~~~~~La~~pnivgiK~s----------sgd~~~~~~~~~~~~~~~f~v~-~G~---d~~~~~~l~~G~~G~is~ 207 (292)
T 3daq_A 142 MTIEPETVEILSQHPYIVALKDA----------TNDFEYLEEVKKRIDTNSFALY-SGN---DDNVVEYYQRGGQGVISV 207 (292)
T ss_dssp CCCCHHHHHHHHTSTTEEEEEEC----------CCCHHHHHHHHTTSCTTTSEEE-ESC---GGGHHHHHHTTCCEEEES
T ss_pred CCCCHHHHHHHhcCCCEEEEEeC----------CCCHHHHHHHHHHCCCCCEEEE-ECC---HHHHHHHHhcCCCEEEeC
Confidence 4678777777632 2222221 1134556666665554 56555 332 244778899999999998
Q ss_pred hH
Q 018919 289 RP 290 (349)
Q Consensus 289 ~~ 290 (349)
.+
T Consensus 208 ~~ 209 (292)
T 3daq_A 208 IA 209 (292)
T ss_dssp GG
T ss_pred HH
Confidence 74
No 248
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.57 E-value=0.09 Score=47.71 Aligned_cols=202 Identities=19% Similarity=0.246 Sum_probs=107.0
Q ss_pred CcceeEcCeec--CcceeecccccccccCChhhHHHHHHHHHcCCeEEec-CCCCCCHHHHHhhCCCceEEEEeecCChh
Q 018919 60 DMNTTVLGFKI--SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SWSTSSVEEVASTGPGIRFFQLYVYKDRN 136 (349)
Q Consensus 60 d~s~~l~g~~~--~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~-~~~~~~~e~i~~~~~~~~~~Ql~~~~~~~ 136 (349)
++.+++.+..+ . |++||-+ ....+.+.-..+++.++++|+..+-. ++.+. ..+ +.+| + ...+
T Consensus 10 ~~~i~i~~~~iG~~-~~vIAgp--c~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkpr-------ts~--~~~~--g-~~~e 74 (262)
T 1zco_A 10 KTVVKINDVKFGEG-FTIIAGP--CSIESREQIMKVAEFLAEVGIKVLRGGAFKPR-------TSP--YSFQ--G-YGEK 74 (262)
T ss_dssp CCCEEETTEEETSS-CEEEEEC--SBCCCHHHHHHHHHHHHHTTCCEEECBSSCCC-------SST--TSCC--C-CTHH
T ss_pred CceEEECCEEECCC-cEEEEeC--CCCCCHHHHHHHHHHHHHcCCCEEEEEecccC-------CCc--cccc--C-ccHH
Confidence 34444544333 2 8888765 22234455568999999999876542 22211 111 1111 1 1133
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCC-cCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEec--
Q 018919 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVL-- 213 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~-- 213 (349)
....+.+.+++.|...+.==.|. ... ++-..+ ++- ++..++ +.+ ...++++.+ ++.||++|.-.
T Consensus 75 gl~~l~~~~~~~Gl~~~te~~d~----~~~-~~l~~~-vd~~kIga~~---~~n---~~ll~~~a~-~~kPV~lk~G~~~ 141 (262)
T 1zco_A 75 ALRWMREAADEYGLVTVTEVMDT----RHV-ELVAKY-SDILQIGARN---SQN---FELLKEVGK-VENPVLLKRGMGN 141 (262)
T ss_dssp HHHHHHHHHHHHTCEEEEECCCG----GGH-HHHHHH-CSEEEECGGG---TTC---HHHHHHHTT-SSSCEEEECCTTC
T ss_pred HHHHHHHHHHHcCCcEEEeeCCH----HhH-HHHHhh-CCEEEECccc---ccC---HHHHHHHHh-cCCcEEEecCCCC
Confidence 34444455566787765311121 111 111111 110 011111 111 455777766 79999999864
Q ss_pred CHHHHHHHH----HcCCCEEEEecCCCCCC-CC--chhhHHHHHHHHHHhcCCCcEEEecCCCCHH-----H-HHHHHHh
Q 018919 214 TAEDARIAV----QAGAAGIIVSNHGARQL-DY--VPATIMALEEVVKATQGRIPVFLDGGVRRGT-----D-VFKALAL 280 (349)
Q Consensus 214 ~~~~a~~a~----~~G~d~I~v~~~gg~~~-~~--~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~-----d-v~kal~~ 280 (349)
+++++..++ ..|.+-+.+--.|++.. .. ....+..++.+++.. ++||+++..=.++. . +..+.++
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~--~~pVi~d~sH~~g~~~~v~~~~~aAva~ 219 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELS--HLPIIVDPSHPAGRRSLVIPLAKAAYAI 219 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEECSSTTTCSGGGHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhh--CCCEEEEcCCCCCccchHHHHHHHHHHc
Confidence 677755544 57876666654454432 11 112345666666654 68998876544443 4 3457789
Q ss_pred CCCEEEEchHH
Q 018919 281 GASGIFIGRPV 291 (349)
Q Consensus 281 GA~~V~ig~~~ 291 (349)
||++++|-+-+
T Consensus 220 Ga~Gl~iE~H~ 230 (262)
T 1zco_A 220 GADGIMVEVHP 230 (262)
T ss_dssp TCSEEEEEBCS
T ss_pred CCCEEEEEecC
Confidence 99999999865
No 249
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.51 E-value=0.0023 Score=55.11 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=33.5
Q ss_pred CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHH
Q 018919 258 GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 294 (349)
Q Consensus 258 ~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~ 294 (349)
-++|||+.|+|++.+|+.+ +.+||++|..++.-+|.
T Consensus 148 ~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 148 PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 3799999999999999999 99999999999988884
No 250
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.49 E-value=0.0096 Score=54.35 Aligned_cols=40 Identities=30% Similarity=0.390 Sum_probs=35.5
Q ss_pred HHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
.+.++++|+.+++|+++.+ +.++++++.+.++|+|+++|.
T Consensus 195 ~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 195 ENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp HHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 5779999998899999876 467999999999999999995
No 251
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=96.48 E-value=0.073 Score=49.27 Aligned_cols=180 Identities=17% Similarity=0.112 Sum_probs=97.1
Q ss_pred hHHHHHHHHHcCCeEEecCC-------------CCCCHHHHH-------hhCC-CceEEEE-eecCChhHHHHHHHHHHH
Q 018919 90 EYATARAASAAGTIMTLSSW-------------STSSVEEVA-------STGP-GIRFFQL-YVYKDRNVVAQLVRRAER 147 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~-------------~~~~~e~i~-------~~~~-~~~~~Ql-~~~~~~~~~~~~~~~~~~ 147 (349)
+...|+.+.++|+..++.+. ...+++++. +..+ .|...-+ ++..++....+.++++++
T Consensus 27 D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~ 106 (302)
T 3fa4_A 27 DGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSR 106 (302)
T ss_dssp SHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHH
Confidence 44788999999988775321 123555543 2222 2333322 112356666788889999
Q ss_pred cCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc---CCcEEEEEec------CH--
Q 018919 148 AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT---KLPILVKGVL------TA-- 215 (349)
Q Consensus 148 ~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~---~~pv~vK~v~------~~-- 215 (349)
+|+.++.|- |.. ..+| .+.. + ...+.+.+. .+.|+..++.. +.++++--.. ..
T Consensus 107 aGaagv~iE-Dq~-~~Kr-----cgh~-~-------gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~glde 171 (302)
T 3fa4_A 107 SGVAAFHIE-DQV-QTKR-----CGHL-A-------GKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEE 171 (302)
T ss_dssp TTCCEEEEC-SBC-CC--------------------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHH
T ss_pred cCCcEEEEC-CCC-CCcc-----cCCC-C-------CCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHH
Confidence 999987652 221 1111 0000 0 000122222 44455555442 4454432221 12
Q ss_pred --HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHhCCCEEEEchH
Q 018919 216 --EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRP 290 (349)
Q Consensus 216 --~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~---GGI~~~~dv~kal~~GA~~V~ig~~ 290 (349)
+-++...++|||.|.+ +| +.+.+.+.++.+.++ ..|+.++ +|-...-.+.+.-++|.+.|..+..
T Consensus 172 Ai~Ra~ay~eAGAD~ifi--~g-------~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~ 241 (302)
T 3fa4_A 172 SVARLRAARDAGADVGFL--EG-------ITSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFA 241 (302)
T ss_dssp HHHHHHHHHTTTCSEEEE--TT-------CCCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTT
T ss_pred HHHHHHHHHHcCCCEEee--cC-------CCCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchH
Confidence 3356678999999988 32 335677888888873 3677653 3322112344455689999999987
Q ss_pred HHHH
Q 018919 291 VVYS 294 (349)
Q Consensus 291 ~l~~ 294 (349)
.+++
T Consensus 242 ~~ra 245 (302)
T 3fa4_A 242 ALGP 245 (302)
T ss_dssp THHH
T ss_pred HHHH
Confidence 7664
No 252
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.47 E-value=0.073 Score=49.21 Aligned_cols=157 Identities=14% Similarity=0.066 Sum_probs=85.1
Q ss_pred CcceeecccccccccCChhhHHHHHHHHHcCCe-EE-ecCCCC---------CCHH---HHH----hhCCCceEEEEeec
Q 018919 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI-MT-LSSWST---------SSVE---EVA----STGPGIRFFQLYVY 132 (349)
Q Consensus 71 ~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~-~~-~~~~~~---------~~~e---~i~----~~~~~~~~~Ql~~~ 132 (349)
..|+++.-++. .++.-...++.+.+.|.. ++ ++-.++ .+++ ++. +....|.++.+...
T Consensus 93 ~~p~~~~i~g~----~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAGM----SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECCS----SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred CCCEEEEcCCC----CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 45766664421 233345677778888866 43 321111 1232 222 22234677777665
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+.+...+.++.++++|+++|.++- ....+......+.....+..-......+...... ++.++++++.+ ++||+.
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~-~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~ 247 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVN-SIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIG 247 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECC-CEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecC-CCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEE
Confidence 4556667778899999999987642 1100000000000000000000000000000112 77899999988 899875
Q ss_pred EE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 210 KG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 210 K~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
-+ +.+++++.+++.+|||+|.+.
T Consensus 248 ~GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 248 TGGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEc
Confidence 44 689999999999999999984
No 253
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.47 E-value=0.15 Score=46.66 Aligned_cols=169 Identities=19% Similarity=0.212 Sum_probs=102.3
Q ss_pred hHHHHHHHHHcCCeEEecCC------------CCCCHHHHHh-------hCCCceEEEE---eecCChhHHHHHHHHHHH
Q 018919 90 EYATARAASAAGTIMTLSSW------------STSSVEEVAS-------TGPGIRFFQL---YVYKDRNVVAQLVRRAER 147 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~------------~~~~~e~i~~-------~~~~~~~~Ql---~~~~~~~~~~~~~~~~~~ 147 (349)
+...|+.+.+.|+..++.+. ...+++++.. ..+.|...-+ |. .+++...+.++++++
T Consensus 25 D~~sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg-~~~~~~~~~v~~l~~ 103 (275)
T 2ze3_A 25 DVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYG-HAPEDVRRTVEHFAA 103 (275)
T ss_dssp SHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSS-SSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCC-CCHHHHHHHHHHHHH
Confidence 44788888888888665331 1235555432 2222332222 32 356677788889999
Q ss_pred cCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc---CCcEEEEEecC---------
Q 018919 148 AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT---KLPILVKGVLT--------- 214 (349)
Q Consensus 148 ~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~---~~pv~vK~v~~--------- 214 (349)
+|+.++-|- |...+ +.+ .+.+.+. .+.|+.+++.. ++|+.+-....
T Consensus 104 aGaagv~iE-D~~~~-------------~~k-------~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~ 162 (275)
T 2ze3_A 104 LGVAGVNLE-DATGL-------------TPT-------ELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGAT 162 (275)
T ss_dssp TTCSEEEEE-CBCSS-------------SSS-------CBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSS
T ss_pred cCCcEEEEC-CCcCC-------------CCC-------ccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhcccccc
Confidence 999987653 22100 000 0122222 45677776652 67866555421
Q ss_pred ----H----HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEec--CCCCHHHHHHHHHhCCCE
Q 018919 215 ----A----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG--GVRRGTDVFKALALGASG 284 (349)
Q Consensus 215 ----~----~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G--GI~~~~dv~kal~~GA~~ 284 (349)
. +.++...++|||.|.+- +.++.+.+.++.+.+ ++|+.... +..+. .+.-++|.+.
T Consensus 163 ~~~~~~~ai~Ra~ay~eAGAd~i~~e---------~~~~~~~~~~i~~~~--~~P~n~~~~~~~~~~---~eL~~lGv~~ 228 (275)
T 2ze3_A 163 DEERLAETVRRGQAYADAGADGIFVP---------LALQSQDIRALADAL--RVPLNVMAFPGSPVP---RALLDAGAAR 228 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECT---------TCCCHHHHHHHHHHC--SSCEEEECCTTSCCH---HHHHHTTCSE
T ss_pred chhhHHHHHHHHHHHHHCCCCEEEEC---------CCCCHHHHHHHHHhc--CCCEEEecCCCCCCH---HHHHHcCCcE
Confidence 1 34677889999999882 245677888888888 57776553 34443 3455699999
Q ss_pred EEEchHHHHH
Q 018919 285 IFIGRPVVYS 294 (349)
Q Consensus 285 V~ig~~~l~~ 294 (349)
|..|...+.+
T Consensus 229 v~~~~~~~ra 238 (275)
T 2ze3_A 229 VSFGQSLMLA 238 (275)
T ss_dssp EECTTHHHHH
T ss_pred EEEChHHHHH
Confidence 9999887764
No 254
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=96.43 E-value=0.1 Score=49.77 Aligned_cols=118 Identities=15% Similarity=0.115 Sum_probs=84.9
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++.+.++++++ +++. .+.++.+|+.+ ++++.+
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~----------------------------~~~~~~e~v~avr~a~g~~~~l~v 195 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGS----------------------------DPAQDIARIEAISAGLPDGHRVTF 195 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSS----------------------------CHHHHHHHHHHHHHSCCTTCEEEE
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCC----------------------------ChHHHHHHHHHHHHHhCCCCEEEE
Confidence 4677777888888889999999987653 1122 56799999887 578888
Q ss_pred EEe--cCHHHHHHHHH---cCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CC
Q 018919 210 KGV--LTAEDARIAVQ---AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 283 (349)
Q Consensus 210 K~v--~~~~~a~~a~~---~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~ 283 (349)
+.- -+.+++....+ .|+ .| - + --+ .++.+.++++.+ ++||++++.+.+..|+.++++.| +|
T Consensus 196 Dan~~~~~~~a~~~~~~l~~~i-~i--E-----q--P~~-d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~~~d 262 (378)
T 2qdd_A 196 DVNRAWTPAIAVEVLNSVRARD-WI--E-----Q--PCQ-TLDQCAHVARRV--ANPIMLDECLHEFSDHLAAWSRGACE 262 (378)
T ss_dssp ECTTCCCHHHHHHHHTSCCCCC-EE--E-----C--CSS-SHHHHHHHHTTC--CSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred eCCCCCCHHHHHHHHHHhCCCc-EE--E-----c--CCC-CHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHhCCCC
Confidence 743 35666644332 344 22 1 1 112 677777777665 79999999999999999999876 89
Q ss_pred EEEEchHH
Q 018919 284 GIFIGRPV 291 (349)
Q Consensus 284 ~V~ig~~~ 291 (349)
.|++-...
T Consensus 263 ~v~ik~~~ 270 (378)
T 2qdd_A 263 GVKIKPNR 270 (378)
T ss_dssp EEEECHHH
T ss_pred EEEecccc
Confidence 99996644
No 255
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.42 E-value=0.14 Score=47.10 Aligned_cols=182 Identities=18% Similarity=0.107 Sum_probs=103.1
Q ss_pred hHHHHHHHHHcCCeEEecCC------------CCCCHHHHHh-------hCCCceEEEE-eecCChhHHHHHHHHHHHcC
Q 018919 90 EYATARAASAAGTIMTLSSW------------STSSVEEVAS-------TGPGIRFFQL-YVYKDRNVVAQLVRRAERAG 149 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~------------~~~~~e~i~~-------~~~~~~~~Ql-~~~~~~~~~~~~~~~~~~~G 149 (349)
|...|+.+.++|+..++.+. ...+++++.. ..+.|...-+ ++..+++...+.+++++++|
T Consensus 24 D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aG 103 (290)
T 2hjp_A 24 NPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEAAG 103 (290)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 44789999999988775332 1235555432 2223333222 11236677778888999999
Q ss_pred CCEEEEecCCCCCCchhHHhhhhcCCCCcCcccc--cCCCCCCch-HHHHHHHHHhc---CCcEEEEEecC---------
Q 018919 150 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKN--FQGLDLGKM-DEDVKWLQTIT---KLPILVKGVLT--------- 214 (349)
Q Consensus 150 ~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~--~~~~~~~~~-~~~i~~i~~~~---~~pv~vK~v~~--------- 214 (349)
+.++-|- |... |+..+-.. ...+.+.+. .+.|+.+++.. +.-|+.+.-..
T Consensus 104 a~gv~iE-D~~~--------------~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~a 168 (290)
T 2hjp_A 104 ASAIVME-DKTF--------------PKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEA 168 (290)
T ss_dssp CSEEEEE-CBCS--------------SCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHH
T ss_pred CeEEEEc-CCCC--------------CccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHH
Confidence 9997653 2210 11100000 000112212 45566666653 23344443221
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V~ig~~~l~ 293 (349)
.+.++...++|||.|.+- + +.++.+.+.++.+.++.++|++++-.-...-++.+.-++| .+.|..|...+.
T Consensus 169 i~Ra~ay~eAGAd~i~~e--~------~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~r 240 (290)
T 2hjp_A 169 VRRGQAYEEAGADAILIH--S------RQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIR 240 (290)
T ss_dssp HHHHHHHHHTTCSEEEEC--C------CCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHH
T ss_pred HHHHHHHHHcCCcEEEeC--C------CCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHH
Confidence 245788899999999982 2 1345567788888885459999752100112344445699 999999998776
Q ss_pred H
Q 018919 294 S 294 (349)
Q Consensus 294 ~ 294 (349)
+
T Consensus 241 a 241 (290)
T 2hjp_A 241 A 241 (290)
T ss_dssp H
T ss_pred H
Confidence 4
No 256
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=96.42 E-value=0.54 Score=44.00 Aligned_cols=182 Identities=14% Similarity=-0.002 Sum_probs=105.1
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ ++ ....+.+|-.+ . .. .+.+..... .+-...
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGA-LRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC-SSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHH
Confidence 5566676433323444445677777778876654 33 23456665322 1 22 345566543 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+- .|.. .-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 119 i~la~~A~~~Gadavlv~--~P~Y-----------~~~------------s~~~l~~~f~~VA~a~~lPiilYn~P~~tg 173 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLA--PVSY-----------TPL------------TQEEAYHHFAAVAGATALPLAIYNNPTTTR 173 (332)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCCS-----------SCC------------CHHHHHHHHHHHHHHCSSCEEEECCHHHHC
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------CCC------------CHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 788999999999998753 2321 101 111 256677888888999998654
Q ss_pred --cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchh-hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 --LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 --~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~-~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++.+.. +-+|.-+. | ... .+..+.++.+..++++.|+ +| +..-++.++.+||+++.-+
T Consensus 174 ~~l~~e~~~~La~~pnIvgiKdss--g-----d~~~~~~~~~~l~~~~~~~f~v~-~G---~D~~~l~~l~~G~~G~is~ 242 (332)
T 2r8w_A 174 FTFSDELLVRLAYIPNIRAIKMPL--P-----ADADYAGELARLRPKLSDDFAIG-YS---GDWGCTDATLAGGDTWYSV 242 (332)
T ss_dssp CCCCHHHHHHHHTSTTEEEEEECC--C-----TTCCHHHHHHHHTTTSCTTCEEE-EC---CHHHHHHHHHTTCSEEEES
T ss_pred cCCCHHHHHHHHcCCCEEEEEeCC--C-----CchhHHHHHHHHHHhcCCCEEEE-eC---chHHHHHHHHCCCCEEEeC
Confidence 4667777776531 22333221 1 000 1445555555444445544 34 2456778889999999998
Q ss_pred hHH
Q 018919 289 RPV 291 (349)
Q Consensus 289 ~~~ 291 (349)
.+.
T Consensus 243 ~an 245 (332)
T 2r8w_A 243 VAG 245 (332)
T ss_dssp GGG
T ss_pred HHH
Confidence 744
No 257
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.40 E-value=0.59 Score=43.12 Aligned_cols=180 Identities=14% Similarity=0.113 Sum_probs=104.6
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ ++ +...+.+|..+ . .. .+.+...-. .+-...
T Consensus 17 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~-~~t~~a 95 (303)
T 2wkj_A 17 AALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGC-VSTAES 95 (303)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SSHHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHH
Confidence 5566776433323444445777777788886654 33 23456665322 1 22 345555432 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcC-CcEEEEEe----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITK-LPILVKGV---- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~-~pv~vK~v---- 212 (349)
.++++.+++.|++++.+-. |.. .-| +.+ ..+..+.+.+.++ +||++=.+
T Consensus 96 i~la~~A~~~Gadavlv~~--P~y-----------~~~------------s~~~l~~~f~~va~a~~~lPiilYn~P~~t 150 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVT--PFY-----------YPF------------SFEEHCDHYRAIIDSADGLPMVVYNIPALS 150 (303)
T ss_dssp HHHHHHHHHHTCSEEEEEC--CCS-----------SCC------------CHHHHHHHHHHHHHHHTTCCEEEEECHHHH
T ss_pred HHHHHHHHhCCCCEEEecC--CCC-----------CCC------------CHHHHHHHHHHHHHhCCCCCEEEEeCcccc
Confidence 8889999999999987642 311 101 111 1456777777888 99998664
Q ss_pred ---cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 ---LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 ---~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++.+.. +-+|.-+. + ++..+.++.+. .+++.|+ +|. ..-++.++.+|+++++-+
T Consensus 151 g~~l~~~~~~~La~~pnIvgiK~s~--------g--d~~~~~~~~~~-~~~f~v~-~G~---d~~~~~~l~~G~~G~is~ 215 (303)
T 2wkj_A 151 GVKLTLDQINTLVTLPGVGALXQTS--------G--DLYQMEQIRRE-HPDLVLY-NGY---DNIFASGLLAGADGGIGS 215 (303)
T ss_dssp CCCCCHHHHHHHHTSTTEEEEEECC--------C--CHHHHHHHHHH-CTTCEEE-ECC---GGGHHHHHHHTCCEEEET
T ss_pred CCCCCHHHHHHHhcCCCEEEEeCCC--------C--CHHHHHHHHHh-CCCeEEE-eCc---HHHHHHHHHCCCCEEEeC
Confidence 4667777776531 22333321 1 23344455444 3355555 332 244778899999999999
Q ss_pred hHHHH
Q 018919 289 RPVVY 293 (349)
Q Consensus 289 ~~~l~ 293 (349)
.+-++
T Consensus 216 ~an~~ 220 (303)
T 2wkj_A 216 TYNIM 220 (303)
T ss_dssp THHHH
T ss_pred HHHhC
Confidence 86543
No 258
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.0047 Score=56.18 Aligned_cols=68 Identities=16% Similarity=0.139 Sum_probs=55.6
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 293 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~ 293 (349)
.+.|+...+.|++.+.+-.-.+ ...+.+.++.+.+ .+||...|||++- |+.+++ +||+-|.+|+..+.
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~--~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQES--PQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHS--TTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBC
T ss_pred HHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcC--CceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHh
Confidence 3778999999999988742111 3567788888876 6999999999986 999999 99999999998763
No 259
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=96.40 E-value=0.58 Score=43.08 Aligned_cols=177 Identities=14% Similarity=0.151 Sum_probs=106.9
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC--CceEEEEeecCChhH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP--GIRFFQLYVYKDRNV 137 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~--~~~~~Ql~~~~~~~~ 137 (349)
|.++.|+ -.+-.+.+.-..+++-.-+.|+.+++ ++ +...+.+|..+ . .. .+.+..... .+...
T Consensus 14 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~-~~t~~ 91 (301)
T 3m5v_A 14 TALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS-NATHE 91 (301)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCC-SSHHH
T ss_pred EeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC-CCHHH
Confidence 5556666 33333445556777777888987654 22 23456665322 1 22 244555432 45667
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
..++++.+++.|++++.+.. |.. .-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 92 ai~la~~a~~~Gadavlv~~--P~y-----------~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~t 146 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVA--PYY-----------NKP------------TQQGLYEHYKAIAQSVDIPVLLYNVPGRT 146 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEEC--CCS-----------SCC------------CHHHHHHHHHHHHHHCSSCEEEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcC--CCC-----------CCC------------CHHHHHHHHHHHHHhCCCCEEEEeCchhh
Confidence 78899999999999987642 311 101 111 256688888888999998764
Q ss_pred ---cCHHHHHHHHHc--CCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 213 ---LTAEDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 213 ---~~~~~a~~a~~~--G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+++...++.+. .+-+|.-+. .++..+.++.+.+ +++.|+ +|. ...++.++.+|++++.-
T Consensus 147 g~~l~~~~~~~La~~~pnivgiKdss----------gd~~~~~~~~~~~-~~f~v~-~G~---d~~~~~~l~~G~~G~is 211 (301)
T 3m5v_A 147 GCEISTDTIIKLFRDCENIYGVKEAS----------GNIDKCVDLLAHE-PRMMLI-SGE---DAINYPILSNGGKGVIS 211 (301)
T ss_dssp SCCCCHHHHHHHHHHCTTEEEEEECS----------SCHHHHHHHHHHC-TTSEEE-ECC---GGGHHHHHHTTCCEEEE
T ss_pred CcCCCHHHHHHHHhcCCCEEEEEeCC----------CCHHHHHHHHHhC-CCeEEE-Ecc---HHHHHHHHHcCCCEEEe
Confidence 467777777665 344444321 1344555666655 466654 442 23467889999999998
Q ss_pred chHH
Q 018919 288 GRPV 291 (349)
Q Consensus 288 g~~~ 291 (349)
+.+-
T Consensus 212 ~~~n 215 (301)
T 3m5v_A 212 VTSN 215 (301)
T ss_dssp SGGG
T ss_pred hHHH
Confidence 8743
No 260
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=96.38 E-value=0.1 Score=49.45 Aligned_cols=121 Identities=16% Similarity=0.144 Sum_probs=86.9
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++.+-++++++ +.+. .+.++.+|+.+ ++++.+
T Consensus 139 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~----------------------------~~~~d~~~v~avr~a~g~~~~l~v 190 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQGFQTLKIKVGKD----------------------------DIATDIARIQEIRKRVGSAVKLRL 190 (366)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSS----------------------------CHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeCCC----------------------------CHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4677777788888889999999887541 1222 56788999887 578887
Q ss_pred EEe--cCHHH----HHHHHH--cCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC
Q 018919 210 KGV--LTAED----ARIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 281 (349)
Q Consensus 210 K~v--~~~~~----a~~a~~--~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G 281 (349)
..- -+.++ ++.+.+ .|++.|- + ...+..++.+.++++.+ ++||++++.+.+..|+.+++..|
T Consensus 191 Dan~~~~~~~a~~~~~~l~~~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~ 260 (366)
T 1tkk_A 191 DANQGWRPKEAVTAIRKMEDAGLGIELVE-------Q-PVHKDDLAGLKKVTDAT--DTPIMADESVFTPRQAFEVLQTR 260 (366)
T ss_dssp ECTTCSCHHHHHHHHHHHHHTTCCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHhhcCCCceEEE-------C-CCCcccHHHHHHHHhhC--CCCEEEcCCCCCHHHHHHHHHhC
Confidence 742 24444 455666 6665552 1 11234677888888776 79999999999999999999876
Q ss_pred -CCEEEEchHH
Q 018919 282 -ASGIFIGRPV 291 (349)
Q Consensus 282 -A~~V~ig~~~ 291 (349)
+|.|++--..
T Consensus 261 ~~d~v~ik~~~ 271 (366)
T 1tkk_A 261 SADLINIKLMK 271 (366)
T ss_dssp CCSEEEECHHH
T ss_pred CCCEEEeehhh
Confidence 8999996543
No 261
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=96.36 E-value=0.072 Score=51.22 Aligned_cols=119 Identities=14% Similarity=0.065 Sum_probs=87.1
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK 210 (349)
+++...+.++++.+.|++.+.++++.+ +.+. .+.++.+|+.+ +++|.+.
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~----------------------------~~~~d~e~v~avR~avG~d~~l~vD 226 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQP----------------------------NCAEDIRRLTAVREALGDEFPLMVD 226 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS----------------------------CHHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCC----------------------------CHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 667777788888899999999887531 1222 56789999886 5888886
Q ss_pred Ee--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CC
Q 018919 211 GV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 283 (349)
Q Consensus 211 ~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~ 283 (349)
.- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..|+.++++.| +|
T Consensus 227 an~~~~~~~ai~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d 296 (398)
T 2pp0_A 227 ANQQWDRETAIRMGRKMEQFNLIWIEE--------PLDAYDIEGHAQLAAAL--DTPIATGEMLTSFREHEQLILGNASD 296 (398)
T ss_dssp CTTCSCHHHHHHHHHHHGGGTCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCCHHHHHHHHHHHHHcCCceeeC--------CCChhhHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcCCCC
Confidence 42 34554 45566678886631 01233577788888776 79999999999999999999987 89
Q ss_pred EEEEchH
Q 018919 284 GIFIGRP 290 (349)
Q Consensus 284 ~V~ig~~ 290 (349)
.|++--.
T Consensus 297 ~v~ik~~ 303 (398)
T 2pp0_A 297 FVQPDAP 303 (398)
T ss_dssp EECCCHH
T ss_pred EEEeCcc
Confidence 9988643
No 262
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.35 E-value=0.021 Score=51.73 Aligned_cols=72 Identities=22% Similarity=0.238 Sum_probs=57.1
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHH
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 292 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l 292 (349)
.+.|+...+.||++|.+-...+. +.+ ..+.+..+++.+ ++||+.-++|.+..++..++++|||+|.++...+
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~-f~G---~~~~l~~i~~~v--~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHR-FGG---SLLDLKRVREAV--DLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSS-SCC---CHHHHHHHHHHC--CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHHHHHHHcCCCEEEEecchhh-hcc---CHHHHHHHHHhc--CCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 47789999999999988432110 111 345667777776 8999999999999999999999999999998866
No 263
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=96.35 E-value=0.022 Score=54.78 Aligned_cols=119 Identities=14% Similarity=0.084 Sum_probs=88.0
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPIL 208 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~ 208 (349)
..+++.+.+.++++.+.|++.+-+.+++. ++. .+.++.+|+.+ +.++.
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~-----------------------------~~~d~~~v~avR~a~g~d~~l~ 199 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRA-----------------------------PRKDAANLRAMRQRVGADVEIL 199 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSC-----------------------------HHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCC-----------------------------HHHHHHHHHHHHHHcCCCceEE
Confidence 35778888888888899999999887541 112 46789999887 57888
Q ss_pred EEEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHH-HHhcCCCcEEEecCCCCHHHHHHHHHhC
Q 018919 209 VKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV-KATQGRIPVFLDGGVRRGTDVFKALALG 281 (349)
Q Consensus 209 vK~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~-~~~~~~ipvia~GGI~~~~dv~kal~~G 281 (349)
+..- -+.++ ++.+.+.|++.|-= ...+..++.+.+++ +.+ ++||++++.+.+..|+.++++.|
T Consensus 200 vDan~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~~--~iPIa~dE~i~~~~~~~~~i~~~ 269 (389)
T 3ozy_A 200 VDANQSLGRHDALAMLRILDEAGCYWFEE--------PLSIDDIEGHRILRAQGT--PVRIATGENLYTRNAFNDYIRND 269 (389)
T ss_dssp EECTTCCCHHHHHHHHHHHHHTTCSEEES--------CSCTTCHHHHHHHHTTCC--SSEEEECTTCCHHHHHHHHHHTT
T ss_pred EECCCCcCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhcCC--CCCEEeCCCCCCHHHHHHHHHcC
Confidence 7743 34544 45677789888731 11223567777777 655 79999999999999999999975
Q ss_pred -CCEEEEch
Q 018919 282 -ASGIFIGR 289 (349)
Q Consensus 282 -A~~V~ig~ 289 (349)
+|.|++--
T Consensus 270 ~~d~v~ik~ 278 (389)
T 3ozy_A 270 AIDVLQADA 278 (389)
T ss_dssp CCSEECCCT
T ss_pred CCCEEEeCc
Confidence 89998864
No 264
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=96.32 E-value=0.047 Score=48.18 Aligned_cols=130 Identities=15% Similarity=0.083 Sum_probs=82.1
Q ss_pred EEeecCChhHHHHHHHHHHHcCCCEEEEec-CCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCC
Q 018919 128 QLYVYKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKL 205 (349)
Q Consensus 128 Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~ 205 (349)
......|.....+.++.+.+.|++.+.+.+ |.+. +| +..+ .+.++++++.++.
T Consensus 15 p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f-------------~~------------~~~~~~~~i~~l~~~~~~ 69 (230)
T 1rpx_A 15 PSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRF-------------VP------------NITIGPLVVDSLRPITDL 69 (230)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSS-------------SS------------CBCCCHHHHHHHGGGCCS
T ss_pred EEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCc-------------cc------------ccccCHHHHHHHHhccCC
Confidence 333456777788889999999999998875 3321 01 0112 5788999988777
Q ss_pred cEEEEEe-cCH-HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCC
Q 018919 206 PILVKGV-LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGAS 283 (349)
Q Consensus 206 pv~vK~v-~~~-~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~ 283 (349)
|+.+-.. .++ +.++.+.++|+|+|.+...... .+...+.+..+.+. ++.++.+=--.+..+.++++..++|
T Consensus 70 ~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~----~~~~~~~~~~~~~~---g~~ig~~~~p~t~~e~~~~~~~~~d 142 (230)
T 1rpx_A 70 PLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSS----TIHLHRTINQIKSL---GAKAGVVLNPGTPLTAIEYVLDAVD 142 (230)
T ss_dssp CEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTT----CSCHHHHHHHHHHT---TSEEEEEECTTCCGGGGTTTTTTCS
T ss_pred cEEEEEEecCHHHHHHHHHHcCCCEEEEEecCcc----chhHHHHHHHHHHc---CCcEEEEeCCCCCHHHHHHHHhhCC
Confidence 8776654 344 4688899999999998532001 11122344444332 3445554323466777777778999
Q ss_pred EEEEch
Q 018919 284 GIFIGR 289 (349)
Q Consensus 284 ~V~ig~ 289 (349)
.|.+.+
T Consensus 143 ~vl~~~ 148 (230)
T 1rpx_A 143 LVLIMS 148 (230)
T ss_dssp EEEEES
T ss_pred EEEEEE
Confidence 985444
No 265
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=96.31 E-value=0.12 Score=49.34 Aligned_cols=117 Identities=11% Similarity=0.025 Sum_probs=83.6
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK 210 (349)
+++.+.+.++++.+.|++.+.++++++ +.+. .+.++.+|+.+ +++|.+.
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~----------------------------~~~~~~e~v~avR~a~G~~~~l~vD 196 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHR----------------------------DFDRDLRRLELLKTCVPAGSKVMID 196 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCS----------------------------SHHHHHHHHHHHHTTSCTTCEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCC----------------------------CHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 667777888888899999999887541 1122 56789999887 5788875
Q ss_pred Ee--cCHHH----HHHHHH--cCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-
Q 018919 211 GV--LTAED----ARIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG- 281 (349)
Q Consensus 211 ~v--~~~~~----a~~a~~--~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G- 281 (349)
.- -+.++ ++.+.+ .+++.|- + ...+..++.+.++++.++ ++||++++.+ +..|+.+++..|
T Consensus 197 an~~~~~~~a~~~~~~l~~~g~~i~~iE-------q-P~~~~~~~~~~~l~~~~~-~iPIa~dE~~-~~~~~~~~i~~~~ 266 (389)
T 2oz8_A 197 PNEAWTSKEALTKLVAIREAGHDLLWVE-------D-PILRHDHDGLRTLRHAVT-WTQINSGEYL-DLQGKRLLLEAHA 266 (389)
T ss_dssp CTTCBCHHHHHHHHHHHHHTTCCCSEEE-------S-CBCTTCHHHHHHHHHHCC-SSEEEECTTC-CHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCceEEe-------C-CCCCcCHHHHHHHHhhCC-CCCEEeCCCC-CHHHHHHHHHcCC
Confidence 42 34444 455667 5555441 1 011235777788877652 6999999999 999999999987
Q ss_pred CCEEEEc
Q 018919 282 ASGIFIG 288 (349)
Q Consensus 282 A~~V~ig 288 (349)
+|.|++.
T Consensus 267 ~d~v~ik 273 (389)
T 2oz8_A 267 ADILNVH 273 (389)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 8999996
No 266
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.31 E-value=0.014 Score=55.53 Aligned_cols=68 Identities=19% Similarity=0.050 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+.++.+.++|+|.|++....|. ....++.+..+++..+ ++||++ |+|.+++++.++..+|||+|.+|
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~----~~~~~e~I~~ir~~~~-~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAH----AKYVGKTLKSLRQLLG-SRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCS----SHHHHHHHHHHHHHHT-TCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cHhHHHHHHHHHHhcC-CCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 46789999999999988632221 1234567777777653 688887 67999999999999999999985
No 267
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=96.31 E-value=0.67 Score=42.79 Aligned_cols=178 Identities=19% Similarity=0.226 Sum_probs=105.2
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+. .+-.+.++-..+++-.-+.|+.+++ + ++...+.+|-.+ . .. -+.+...-. .+-..+
T Consensus 19 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-~st~~a 96 (306)
T 1o5k_A 19 TAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT-NSTEKT 96 (306)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCC-ccHHHH
Confidence 55566765 4434555556777777788886654 3 334466665322 1 22 345556533 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+.. |. |.-| +++ ..+..+.+.+.+++||++=.+
T Consensus 97 i~la~~A~~~Gadavlv~~--P~-----------y~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~tg 151 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVT--PY-----------YNKP------------TQEGLYQHYKYISERTDLGIVVYNVPGRTG 151 (306)
T ss_dssp HHHHHHHHHHTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHTTCSSCEEEEECHHHHS
T ss_pred HHHHHHHHhcCCCEEEECC--CC-----------CCCC------------CHHHHHHHHHHHHHhCCCCEEEEeCccccC
Confidence 8889999999999987642 31 1101 111 145677777788999998664
Q ss_pred --cCHHHHHHHH-Hc-CCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcC---CCcEEEecCCCCHHHHHHHHHhCCCEE
Q 018919 213 --LTAEDARIAV-QA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALALGASGI 285 (349)
Q Consensus 213 --~~~~~a~~a~-~~-G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~---~ipvia~GGI~~~~dv~kal~~GA~~V 285 (349)
.+++...++. +. .+-+|.-+. .++..+.++.+..++ ++.|+ +|- ..-++.++.+||+++
T Consensus 152 ~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~~~f~v~-~G~---d~~~l~~l~~G~~G~ 217 (306)
T 1o5k_A 152 VNVLPETAARIAADLKNVVGIXEAN----------PDIDQIDRTVSLTKQARSDFMVW-SGN---DDRTFYLLCAGGDGV 217 (306)
T ss_dssp CCCCHHHHHHHHHHCTTEEEEEECC----------CCHHHHHHHHHHHHHHCTTCEEE-ESS---GGGHHHHHHHTCCEE
T ss_pred cCCCHHHHHHHHHhCCCEEEEeCCC----------CCHHHHHHHHHhcCCCCCcEEEE-ECc---HHHHHHHHHCCCCEE
Confidence 4667777776 53 233343321 123344444444432 45553 442 244778899999999
Q ss_pred EEchHH
Q 018919 286 FIGRPV 291 (349)
Q Consensus 286 ~ig~~~ 291 (349)
.-+.+-
T Consensus 218 is~~an 223 (306)
T 1o5k_A 218 ISVVSN 223 (306)
T ss_dssp EESGGG
T ss_pred EecHHH
Confidence 998754
No 268
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=96.26 E-value=0.36 Score=43.92 Aligned_cols=133 Identities=20% Similarity=0.179 Sum_probs=81.1
Q ss_pred hHHHHHHHHHcCCeEEecCCC------------CCCHHHHHh-------hCCCceEE-EE-eec--CChhHHHHHHHHHH
Q 018919 90 EYATARAASAAGTIMTLSSWS------------TSSVEEVAS-------TGPGIRFF-QL-YVY--KDRNVVAQLVRRAE 146 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~~------------~~~~e~i~~-------~~~~~~~~-Ql-~~~--~~~~~~~~~~~~~~ 146 (349)
|..+|+.+.++|+..++...| ..+++|+.. ..+.++.+ -+ |++ .+++...+.+.++.
T Consensus 26 Da~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 105 (275)
T 1o66_A 26 ESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAELM 105 (275)
T ss_dssp SHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHHHHHH
Confidence 558999999999998864321 235666532 23323222 21 111 25666666667788
Q ss_pred HcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEE---------------EE
Q 018919 147 RAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILV---------------KG 211 (349)
Q Consensus 147 ~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~v---------------K~ 211 (349)
++|+.++-|- |. .+..+.|+.+.+ .++||+. |.
T Consensus 106 kaGa~aVklE-dg------------------------------~e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~v 153 (275)
T 1o66_A 106 AAGAHMVKLE-GG------------------------------VWMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYKV 153 (275)
T ss_dssp HTTCSEEEEE-CS------------------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGTTC------
T ss_pred HcCCcEEEEC-Cc------------------------------HHHHHHHHHHHH-cCCCeEeeeccCceeecccCCeEE
Confidence 8999887542 11 011456777765 3777751 11
Q ss_pred e---c----CHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEec
Q 018919 212 V---L----TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 266 (349)
Q Consensus 212 v---~----~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 266 (349)
. . ..++|+.+.++|||.|++-. .+ .+...++.+.+ ++|+|.-|
T Consensus 154 ~grt~~a~~~i~rA~a~~eAGA~~ivlE~---------vp-~~~a~~it~~l--~iP~igIG 203 (275)
T 1o66_A 154 QGRGGKAQALLNDAKAHDDAGAAVVLMEC---------VL-AELAKKVTETV--SCPTIGIG 203 (275)
T ss_dssp -----CHHHHHHHHHHHHHTTCSEEEEES---------CC-HHHHHHHHHHC--SSCEEEES
T ss_pred EeChHHHHHHHHHHHHHHHcCCcEEEEec---------CC-HHHHHHHHHhC--CCCEEEEC
Confidence 1 1 12568889999999999832 22 25677888888 79999765
No 269
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=96.25 E-value=0.12 Score=47.38 Aligned_cols=179 Identities=20% Similarity=0.170 Sum_probs=104.0
Q ss_pred hHHHHHHHHHcCCeEEecCCC-------------CCCHHHHHh-------hCCCceEEEE-eecCChhHHHHHHHHHHHc
Q 018919 90 EYATARAASAAGTIMTLSSWS-------------TSSVEEVAS-------TGPGIRFFQL-YVYKDRNVVAQLVRRAERA 148 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~~-------------~~~~e~i~~-------~~~~~~~~Ql-~~~~~~~~~~~~~~~~~~~ 148 (349)
|...|+.+.++|+..++.+.+ ..+++++.. ..+.|...-+ ++..+++...+.+++++++
T Consensus 30 D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~a 109 (287)
T 3b8i_A 30 DPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERA 109 (287)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHh
Confidence 447899999999886653221 235555432 2223333322 1123677777888899999
Q ss_pred CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-C--CcEEEEEec-------CHHH
Q 018919 149 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-K--LPILVKGVL-------TAED 217 (349)
Q Consensus 149 G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~--~pv~vK~v~-------~~~~ 217 (349)
|+.++-|- |... |++-+-.... +.+.+. .+.|+.+++.- + .-|+.+.-. ..+.
T Consensus 110 Ga~gv~iE-D~~~--------------pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~R 173 (287)
T 3b8i_A 110 GIAALTIE-DTLL--------------PAQFGRKSTD-LICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQR 173 (287)
T ss_dssp TCSEEEEE-CBCC--------------SCCTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHH
T ss_pred CCeEEEEc-CCCC--------------ccccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHH
Confidence 99997653 2211 1110000000 122222 45577776653 2 334444322 2356
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEe-cCCCCHHHHHHHHHhCCCEEEEchHHHHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD-GGVRRGTDVFKALALGASGIFIGRPVVYSL 295 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~-GGI~~~~dv~kal~~GA~~V~ig~~~l~~~ 295 (349)
++...++|||.|.+- +.++.+.+.++.+.+ ++|++.. +|-...-++.+.-++|.+.|..|...+++.
T Consensus 174 a~ay~eAGAd~i~~e---------~~~~~~~~~~i~~~~--~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~raa 241 (287)
T 3b8i_A 174 TLAYQEAGADGICLV---------GVRDFAHLEAIAEHL--HIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFAA 241 (287)
T ss_dssp HHHHHHTTCSEEEEE---------CCCSHHHHHHHHTTC--CSCEEEECTTCGGGCCHHHHHHTTEEEEECCCHHHHHH
T ss_pred HHHHHHcCCCEEEec---------CCCCHHHHHHHHHhC--CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHHHHH
Confidence 788999999999983 244567788888877 6887743 332222334455579999999999877653
No 270
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=96.22 E-value=0.088 Score=50.53 Aligned_cols=118 Identities=15% Similarity=0.172 Sum_probs=86.1
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++++.++++. +.+. .+.++.+|+.+ +++|.+
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-----------------------------~~~~~~e~v~avR~a~g~d~~l~v 194 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGG-----------------------------PLKADIAMVAEVRRAVGDDVDLFI 194 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCS-----------------------------CHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccC-----------------------------CHHHHHHHHHHHHHhhCCCCEEEE
Confidence 467777788888888999999988742 1122 56789999886 588887
Q ss_pred EEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..++.++++.| +
T Consensus 195 Dan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~ 264 (397)
T 2qde_A 195 DINGAWTYDQALTTIRALEKYNLSKIEQ--------PLPAWDLDGMARLRGKV--ATPIYADESAQELHDLLAIINKGAA 264 (397)
T ss_dssp ECTTCCCHHHHHHHHHHHGGGCCSCEEC--------CSCTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred ECCCCCCHHHHHHHHHHHHhCCCCEEEC--------CCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 642 34554 45566778887631 01223567777777665 79999999999999999999976 8
Q ss_pred CEEEEch
Q 018919 283 SGIFIGR 289 (349)
Q Consensus 283 ~~V~ig~ 289 (349)
|.|++--
T Consensus 265 d~v~ik~ 271 (397)
T 2qde_A 265 DGLMIKT 271 (397)
T ss_dssp SEEEECH
T ss_pred CEEEEec
Confidence 9999854
No 271
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=96.22 E-value=0.038 Score=49.80 Aligned_cols=125 Identities=14% Similarity=0.166 Sum_probs=81.2
Q ss_pred eecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcE
Q 018919 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPI 207 (349)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv 207 (349)
|...+.+.+.+-++.+.++|++++++.+=.+ |... .+.++++.+.. +.|+
T Consensus 67 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~----------------------------dg~iD~~~~~~Li~~a~~~~v 118 (256)
T 1twd_A 67 YSDGEFAAILEDVRTVRELGFPGLVTGVLDV----------------------------DGNVDMPRMEKIMAAAGPLAV 118 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCT----------------------------TSSBCHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECC----------------------------CCCcCHHHHHHHHHHhCCCcE
Confidence 4333445677888899999999998754221 1222 45566666554 6776
Q ss_pred EEEEe----cCHHH-HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCC
Q 018919 208 LVKGV----LTAED-ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 282 (349)
Q Consensus 208 ~vK~v----~~~~~-a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA 282 (349)
..--. .++.. .+.+.+.|++.|-.|+... .....++.|.++.+..+ ++.|++.|||+. +.+.+.+..|+
T Consensus 119 TFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~----~a~~g~~~L~~Lv~~a~-~i~Im~GgGv~~-~Ni~~l~~tGv 192 (256)
T 1twd_A 119 TFHRAFDMCANPLYTLNNLAELGIARVLTSGQKS----DALQGLSKIMELIAHRD-APIIMAGAGVRA-ENLHHFLDAGV 192 (256)
T ss_dssp EECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSS----STTTTHHHHHHHHTSSS-CCEEEEESSCCT-TTHHHHHHHTC
T ss_pred EEECchhccCCHHHHHHHHHHcCCCEEECCCCCC----CHHHHHHHHHHHHHhhC-CcEEEecCCcCH-HHHHHHHHcCC
Confidence 65332 34544 5778899999998754311 22334556666665544 899999999976 55656568899
Q ss_pred CEEEEc
Q 018919 283 SGIFIG 288 (349)
Q Consensus 283 ~~V~ig 288 (349)
+.+=.+
T Consensus 193 ~e~H~S 198 (256)
T 1twd_A 193 LEVHSS 198 (256)
T ss_dssp SEEEEC
T ss_pred CeEeEC
Confidence 888754
No 272
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.21 E-value=0.13 Score=44.98 Aligned_cols=155 Identities=15% Similarity=0.150 Sum_probs=93.4
Q ss_pred HHHHHHHHcCCeEE--e-cCCCC--CCHHHH---HhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 92 ATARAASAAGTIMT--L-SSWST--SSVEEV---ASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (349)
Q Consensus 92 ~la~aa~~~G~~~~--~-~~~~~--~~~e~i---~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~ 162 (349)
.=+++|.++|..++ + -..|+ .+++.. .+..| ....+-+|.+.+.+. ..+.+.+.+.+.+.+|-+-+
T Consensus 13 eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~---i~~~~~~~~ld~vQLHG~e~-- 87 (205)
T 1nsj_A 13 EDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEK---ILDVASYVQLNAVQLHGEEP-- 87 (205)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHH---HHHHHHHHTCSEEEECSCCC--
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHH---HHHHHHhhCCCEEEECCCCC--
Confidence 45667777775432 2 22222 345543 33333 455667777666554 34455667999999874321
Q ss_pred CchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe--cCHHHHHHHHHcCCCEEEEecC----CC
Q 018919 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSNH----GA 236 (349)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v--~~~~~a~~a~~~G~d~I~v~~~----gg 236 (349)
.+.++.+++ ++|++ |-+ .+.++...+.+..+|++.+... ||
T Consensus 88 ------------------------------~~~~~~l~~--~~~vi-ka~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GG 134 (205)
T 1nsj_A 88 ------------------------------IELCRKIAE--RILVI-KAVGVSNERDMERALNYREFPILLDTKTPEYGG 134 (205)
T ss_dssp ------------------------------HHHHHHHHT--TSEEE-EEEEESSHHHHHHHGGGTTSCEEEEESCSSSSS
T ss_pred ------------------------------HHHHHHHhc--CCCEE-EEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCC
Confidence 144555553 46776 543 4555665665666999999864 44
Q ss_pred CCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-hCCCEEEEchHH
Q 018919 237 RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGRPV 291 (349)
Q Consensus 237 ~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~-~GA~~V~ig~~~ 291 (349)
+.. .-.|+.+.++. ..+.|++..||+ +++.+.+++. .++.+|=+.|-+
T Consensus 135 tG~---~fdw~~l~~~~---~~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGv 183 (205)
T 1nsj_A 135 SGK---TFDWSLILPYR---DRFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGV 183 (205)
T ss_dssp CCS---CCCGGGTGGGG---GGSSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGG
T ss_pred CCC---ccCHHHHHhhh---cCCCcEEEECCC-CHHHHHHHHHhcCCCEEEECCce
Confidence 321 11233333221 125799999999 6689999987 699999999855
No 273
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=96.20 E-value=0.18 Score=46.39 Aligned_cols=178 Identities=12% Similarity=0.137 Sum_probs=105.3
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+.-.+ .+.++-..+++-.-+.|+.+++ + ++...+.+|-.+ . .. .+.+...-. .+-...
T Consensus 8 ~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~-~~t~~a 85 (291)
T 3a5f_A 8 VAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGS-NNTAAS 85 (291)
T ss_dssp EECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHH
T ss_pred eeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCc-ccHHHH
Confidence 55677775444 5666666788877888987654 3 234456665322 1 22 345566533 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+.. |.. .-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 86 i~la~~a~~~Gadavlv~~--P~y-----------~~~------------s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 140 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVIT--PYY-----------NKT------------TQKGLVKHFKAVSDAVSTPIIIYNVPGRTG 140 (291)
T ss_dssp HHHHHHHHHTTCSEEEEEC--CCS-----------SCC------------CHHHHHHHC-CTGGGCCSCEEEEECHHHHS
T ss_pred HHHHHHHHhcCCCEEEEcC--CCC-----------CCC------------CHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 8889999999999987642 321 101 111 144566667778999998664
Q ss_pred --cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 213 --LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 213 --~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
.+++...++.+.. +-+|.-+. .++..+.++.+..++++.|+ +|. -..++.++.+||+++.-+.
T Consensus 141 ~~l~~~~~~~La~~pnivgiK~s~----------gd~~~~~~~~~~~~~~f~v~-~G~---d~~~~~~l~~G~~G~is~~ 206 (291)
T 3a5f_A 141 LNITPGTLKELCEDKNIVAVXEAS----------GNISQIAQIKALCGDKLDIY-SGN---DDQIIPILALGGIGVISVL 206 (291)
T ss_dssp CCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHHGGGSEEE-ESC---GGGHHHHHHTTCCEEEESG
T ss_pred CCCCHHHHHHHHcCCCEEEEeCCC----------CCHHHHHHHHHhcCCCeEEE-eCc---HHHHHHHHHCCCCEEEecH
Confidence 4667777776532 22333221 12444555555554455554 442 2346678999999999988
Q ss_pred HH
Q 018919 290 PV 291 (349)
Q Consensus 290 ~~ 291 (349)
+-
T Consensus 207 an 208 (291)
T 3a5f_A 207 AN 208 (291)
T ss_dssp GG
T ss_pred HH
Confidence 53
No 274
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.19 E-value=0.22 Score=45.90 Aligned_cols=178 Identities=12% Similarity=0.088 Sum_probs=103.7
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+ -.+-.+.++-..+++-.-+.|+.+++ + ++...+.+|-.+ . .. .+.+..... .+-...
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS-NNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC-CCHHHH
Confidence 4445555 33323444555777777788987664 2 233456665322 1 22 345566533 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+- .|.. .-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y-----------~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~tg 139 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV--AGYY-----------NRP------------SQEGLYQHFKMVHDAIDIPIIVYNIPPRAV 139 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCTT-----------TCC------------CHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred HHHHHHHHhcCCCEEEEc--CCCC-----------CCC------------CHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 888999999999998763 2321 101 111 255677888888999998664
Q ss_pred --cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 213 --LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 213 --~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
.+++...++.+.. +-+|.-+. | ++..+.++.+..++++.|+ +|. -.-++.++.+|+++++-+.
T Consensus 140 ~~l~~~~~~~La~~pnIvgiKds~-g---------d~~~~~~~~~~~~~~f~v~-~G~---d~~~l~~l~~G~~G~is~~ 205 (297)
T 2rfg_A 140 VDIKPETMARLAALPRIVGVKDAT-T---------DLARISRERMLINKPFSFL-SGD---DMTAIAYNASGGQGCISVS 205 (297)
T ss_dssp CCCCHHHHHHHHTSTTEEEEEECS-C---------CTTHHHHHHTTCCSCCEEE-ESC---GGGHHHHHHTTCCEEEESG
T ss_pred CCCCHHHHHHHHcCCCEEEEEeCC-C---------CHHHHHHHHHhcCCCEEEE-eCc---HHHHHHHHHCCCCEEEecH
Confidence 4667777776532 22333321 1 1233444544444455554 442 2346788999999999987
Q ss_pred HH
Q 018919 290 PV 291 (349)
Q Consensus 290 ~~ 291 (349)
+-
T Consensus 206 an 207 (297)
T 2rfg_A 206 AN 207 (297)
T ss_dssp GG
T ss_pred HH
Confidence 53
No 275
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.19 E-value=0.014 Score=57.82 Aligned_cols=233 Identities=15% Similarity=0.184 Sum_probs=133.0
Q ss_pred hhccccccccccc-CCCCCCCcceeEcC-eecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH
Q 018919 41 NAFSRILFRPRIL-IDVSKIDMNTTVLG-FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (349)
Q Consensus 41 ~~~~~~~l~p~~l-~~~~~~d~s~~l~g-~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~ 118 (349)
.+||++.|+|... .+..++|+++++-. ..+..||+.+||.+.+ +..++.+..+.|..+.+... .++++.+
T Consensus 12 ~~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~vt------~~eLa~av~~~Gg~G~i~~~--~~~e~~~ 83 (491)
T 1zfj_A 12 YTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVT------GSKMAIAIARAGGLGVIHKN--MSITEQA 83 (491)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECCS--SCHHHHH
T ss_pred CChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchhcc------HHHHHHHHHHcCCceEEeCC--CCHHHHH
Confidence 4799999999876 34578999998854 6788999999998643 45788898999988777532 4554432
Q ss_pred hh------CCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecC--CC--CCC-chhHHhhhhcC--CC--CcCc---
Q 018919 119 ST------GPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD--TP--RLG-RREADIKNRFT--LP--PFLT--- 180 (349)
Q Consensus 119 ~~------~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d--~p--~~g-~r~~d~~~~~~--~p--~~~~--- 180 (349)
+. .......++..........+.++.+.+.+...+.+. | .. ..| ...+|+..... .+ +-++
T Consensus 84 ~~i~~v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVv-d~~~~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~ 162 (491)
T 1zfj_A 84 EEVRKVKRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIV-ETLANRKLVGIITNRDMRFISDYNAPISEHMTSEH 162 (491)
T ss_dssp HHHHHHHHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEE-SCTTTCBEEEEEEHHHHHHCSCSSSBTTTSCCCSC
T ss_pred HHHHHHhhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-EeCCCCEEEEEEEHHHHhhhccCCCcHHHHcCCCC
Confidence 21 011110011111111234567777778888877553 2 00 000 11233321000 00 0000
Q ss_pred ---ccccC------------C-----CCCC------ch-H-HHHHHHHH-----hcCCcEEEEEec-----CHHHHHHHH
Q 018919 181 ---LKNFQ------------G-----LDLG------KM-D-EDVKWLQT-----ITKLPILVKGVL-----TAEDARIAV 222 (349)
Q Consensus 181 ---~~~~~------------~-----~~~~------~~-~-~~i~~i~~-----~~~~pv~vK~v~-----~~~~a~~a~ 222 (349)
..... + ..|. -. . +.++.+.+ ....++.+.... ..+.++.+.
T Consensus 163 ~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~ 242 (491)
T 1zfj_A 163 LVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALF 242 (491)
T ss_dssp CCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHH
T ss_pred CEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHH
Confidence 00000 0 0010 00 1 12222221 001112222211 258899999
Q ss_pred HcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 223 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 223 ~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
++|+|.|+++..+|. ....++.+.++++.++ .+|++ .|+|.+.+++.+++.+||++|.+|
T Consensus 243 ~~G~d~ivi~~a~g~----~~~~~~~i~~l~~~~p-~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 243 EAGADAIVIDTAHGH----SAGVLRKIAEIRAHFP-NRTLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHTCSEEEECCSCTT----CHHHHHHHHHHHHHCS-SSCEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HcCCCeEEEeeecCc----chhHHHHHHHHHHHCC-CCcEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 999999999764432 2235677888877763 68998 899999999999999999999888
No 276
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.18 E-value=0.66 Score=42.50 Aligned_cols=108 Identities=20% Similarity=0.256 Sum_probs=74.6
Q ss_pred cCHHHHHHHH-HcCCCEEEEec---CCCCCCCCch-hhHHHHHHHHHHhcCCCcEEEecCCCCHH-HHHHHHHhCCCEEE
Q 018919 213 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGT-DVFKALALGASGIF 286 (349)
Q Consensus 213 ~~~~~a~~a~-~~G~d~I~v~~---~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI~~~~-dv~kal~~GA~~V~ 286 (349)
.+|++|+... +.|+|.+-++- ||-+. +.| -.++.|.+|.+.+ ++|++.=||=..+. ++.+++.+|..-|=
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~--~~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiN 234 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSVHGPYK--GEPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAISLGTSKIN 234 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCBSSCCS--SSCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcccCCcC--CCCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHHcCCeEEE
Confidence 4688887766 69999999873 55431 222 2578899999988 69999888766554 57789999999999
Q ss_pred EchHHHHHHhh-------cC------HHHHHHHHHHHHHHHHHHHHHcCCC
Q 018919 287 IGRPVVYSLAA-------EG------EKGVRRVLEMLREEFELAMALSGCR 324 (349)
Q Consensus 287 ig~~~l~~~~~-------~G------~~gv~~~l~~l~~el~~~m~~~G~~ 324 (349)
|+|-+.++... .. ..-+....+.+++.++..|..+|..
T Consensus 235 i~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 285 (288)
T 3q94_A 235 VNTENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSN 285 (288)
T ss_dssp ECHHHHHHHHHHHHHHHHHCSSCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EChHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99977654321 00 1123333455666677777777764
No 277
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.17 E-value=0.1 Score=51.06 Aligned_cols=88 Identities=22% Similarity=0.205 Sum_probs=66.8
Q ss_pred HHHHHHHHHhcCCcEEEEEe-cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH
Q 018919 193 DEDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 271 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v-~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 271 (349)
.++|+.+|+.+++||+.|.. .++.....+..+|||+|.+...- ++ ..++..+.+.++.+ .+.++++ +++.
T Consensus 97 ~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~---l~--~~~l~~l~~~a~~l--gm~~LvE--vh~~ 167 (452)
T 1pii_A 97 FNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSV---LD--DDQYRQLAAVAHSL--EMGVLTE--VSNE 167 (452)
T ss_dssp TTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTT---CC--HHHHHHHHHHHHHT--TCEEEEE--ECSH
T ss_pred HHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEccc---CC--HHHHHHHHHHHHHc--CCeEEEE--eCCH
Confidence 36899999999999999985 45667778999999999886431 11 23444444444445 6777766 7999
Q ss_pred HHHHHHHHhCCCEEEEch
Q 018919 272 TDVFKALALGASGIFIGR 289 (349)
Q Consensus 272 ~dv~kal~~GA~~V~ig~ 289 (349)
+++..|+.+||+.|++--
T Consensus 168 eE~~~A~~lga~iIGinn 185 (452)
T 1pii_A 168 EEQERAIALGAKVVGINN 185 (452)
T ss_dssp HHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHCCCCEEEEeC
Confidence 999999999999998864
No 278
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.16 E-value=0.71 Score=42.59 Aligned_cols=178 Identities=15% Similarity=0.169 Sum_probs=103.7
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
.|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ + ++...+.+|-.+ . .. .+.+..... .+-..
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~st~~ 99 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGT-NNTRT 99 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SCHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCC-CCHHH
Confidence 35566776433323444445777777788876654 3 234456665322 1 22 345555533 45667
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
..++++.+++.|++++.+.. |. |.-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 100 ai~la~~A~~~Gadavlv~~--P~-----------y~~~------------~~~~l~~~f~~ia~a~~lPiilYn~P~~t 154 (304)
T 3cpr_A 100 SVELAEAAASAGADGLLVVT--PY-----------YSKP------------SQEGLLAHFGAIAAATEVPICLYDIPGRS 154 (304)
T ss_dssp HHHHHHHHHHTTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHHHCCSCEEEEECHHHH
T ss_pred HHHHHHHHHhcCCCEEEECC--CC-----------CCCC------------CHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 78899999999999987642 31 1101 111 256677888888999998764
Q ss_pred ---cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 ---LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 ---~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++.+.. +-+|.-+. .++..+.++.+.. ++.|+ +|. ..-++.++.+|++++.-+
T Consensus 155 g~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~--~f~v~-~G~---d~~~l~~l~~G~~G~is~ 218 (304)
T 3cpr_A 155 GIPIESDTMRRLSELPTILAVXDAK----------GDLVAATSLIKET--GLAWY-SGD---DPLNLVWLALGGSGFISV 218 (304)
T ss_dssp SSCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHH--CCEEE-ECS---GGGHHHHHHTTCCEEEES
T ss_pred CcCCCHHHHHHHHcCCCEEEEecCC----------CCHHHHHHHHHhc--CEEEE-ECc---HHHHHHHHHCCCCEEEec
Confidence 4667777776531 22232221 1234444454443 45553 442 234678899999999998
Q ss_pred hHH
Q 018919 289 RPV 291 (349)
Q Consensus 289 ~~~ 291 (349)
.+.
T Consensus 219 ~an 221 (304)
T 3cpr_A 219 IGH 221 (304)
T ss_dssp GGG
T ss_pred HHH
Confidence 754
No 279
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=96.16 E-value=0.35 Score=45.53 Aligned_cols=179 Identities=16% Similarity=0.165 Sum_probs=105.5
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
.|.++.|+.-..-.+.+.-..+++-.-+.|+.+++ ++ ....+.+|-.+ . .. -+.+..... .+-..
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG-TNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS-SCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHH
Confidence 46677787533333444455777777788875543 33 23456665322 1 22 345566533 45566
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
+.++++.+++.|++++.+-. |.. .-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 115 ai~la~~A~~~Gadavlv~~--P~Y-----------~~~------------s~~~l~~~f~~VA~a~~lPiilYn~P~~t 169 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVIN--PYY-----------WKV------------SEANLIRYFEQVADSVTLPVMLYNFPALT 169 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEEC--CSS-----------SCC------------CHHHHHHHHHHHHHTCSSCEEEEECHHHH
T ss_pred HHHHHHHHHhcCCCEEEECC--CCC-----------CCC------------CHHHHHHHHHHHHHhcCCCEEEEeCchhc
Confidence 77889999999999987642 321 101 111 256677888888999998764
Q ss_pred ---cCHHHHHHHH-Hc-CCCEEEEecCCCCCCCCchhhHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHhCCCE
Q 018919 213 ---LTAEDARIAV-QA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASG 284 (349)
Q Consensus 213 ---~~~~~a~~a~-~~-G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~dv~kal~~GA~~ 284 (349)
.+++...++. +. .+-+|.-+. .++..+.++.+.++ +++.|+ +| +...++.++.+||++
T Consensus 170 g~~l~~e~~~~La~~~pnIvgiKdss----------gd~~~~~~l~~~~~~~~~~f~v~-~G---~D~~~l~~l~~Ga~G 235 (343)
T 2v9d_A 170 GQDLTPALVKTLADSRSNIIGIKDTI----------DSVAHLRSMIHTVKGAHPHFTVL-CG---YDDHLFNTLLLGGDG 235 (343)
T ss_dssp SSCCCHHHHHHHHHHCTTEEEEEECC----------SCHHHHHHHHHHHHHHCTTCEEE-ES---SGGGHHHHHHTTCCE
T ss_pred CcCCCHHHHHHHHHhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCCCEEEE-EC---cHHHHHHHHHCCCCE
Confidence 4667777776 53 233333321 12344445554443 456554 44 224577889999999
Q ss_pred EEEchH
Q 018919 285 IFIGRP 290 (349)
Q Consensus 285 V~ig~~ 290 (349)
++-+.+
T Consensus 236 ~is~~a 241 (343)
T 2v9d_A 236 AISASG 241 (343)
T ss_dssp ECCGGG
T ss_pred EEeCHH
Confidence 998874
No 280
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=96.14 E-value=0.058 Score=51.56 Aligned_cols=117 Identities=15% Similarity=0.075 Sum_probs=84.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++.+-+.+++. ++. .+.++.+|+.+ ++++.+
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~iKiK~G~~-----------------------------~~~d~~~v~avR~a~g~~~~l~v 194 (378)
T 3eez_A 144 KSVEETRAVIDRYRQRGYVAHSVKIGGD-----------------------------VERDIARIRDVEDIREPGEIVLY 194 (378)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSC-----------------------------HHHHHHHHHHHTTSCCTTCEEEE
T ss_pred CCHHHHHHHHHHHHhCCCCEEEeccCCC-----------------------------HHHHHHHHHHHHHHcCCCceEEE
Confidence 5677788888888889999999887641 112 46788899887 578888
Q ss_pred EEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
+.- -+.++| +.+.+.|+ .|- +. - +.++.+.++++.+ ++||++++.+.+..|+.++++.| +
T Consensus 195 Dan~~~~~~~a~~~~~~l~~~~i-~iE-------qP--~-~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~ 261 (378)
T 3eez_A 195 DVNRGWTRQQALRVMRATEDLHV-MFE-------QP--G-ETLDDIAAIRPLH--SAPVSVDECLVTLQDAARVARDGLA 261 (378)
T ss_dssp ECTTCCCHHHHHHHHHHTGGGTC-CEE-------CC--S-SSHHHHHHTGGGC--CCCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ECCCCCCHHHHHHHHHHhccCCe-EEe-------cC--C-CCHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHcCCC
Confidence 753 345554 44455665 441 11 1 1566666666655 79999999999999999999976 8
Q ss_pred CEEEEchHH
Q 018919 283 SGIFIGRPV 291 (349)
Q Consensus 283 ~~V~ig~~~ 291 (349)
|.|++....
T Consensus 262 d~v~ik~~~ 270 (378)
T 3eez_A 262 EVFGIKLNR 270 (378)
T ss_dssp SEEEEEHHH
T ss_pred CEEEeCchh
Confidence 999998654
No 281
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.12 E-value=0.044 Score=48.43 Aligned_cols=125 Identities=13% Similarity=0.041 Sum_probs=80.9
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEec-CCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILV 209 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~v 209 (349)
..|...+.+.++.+.+.|++.+.+.+ |.+. .| +..+ .+.++.+|+.++.|+.+
T Consensus 15 a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~f-------------v~------------~~~~~~~~~~~lr~~~~~~~~v 69 (228)
T 1h1y_A 15 SSDFANLAAEADRMVRLGADWLHMDIMDGHF-------------VP------------NLTIGAPVIQSLRKHTKAYLDC 69 (228)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSSS-------------SS------------CBCBCHHHHHHHHTTCCSEEEE
T ss_pred eCCHHHHHHHHHHHHHcCCCEEEEEEecCCc-------------Cc------------chhhCHHHHHHHHhhcCCcEEE
Confidence 35677778889999999999987654 2211 11 1122 57788999887777775
Q ss_pred EEe-cCH-HHHHHHHHcCCCEEEEecCCCCCCCCchhh-HHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh---CCC
Q 018919 210 KGV-LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GAS 283 (349)
Q Consensus 210 K~v-~~~-~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~---GA~ 283 (349)
... .++ +.++.+.++|+|+|++ |++.. +.. ...+.++.+. .+.++.+=.-.++.+.++.+.. ++|
T Consensus 70 ~lmv~d~~~~i~~~~~agad~v~v--H~~~~----~~~~~~~~~~i~~~---g~~igv~~~p~t~~e~~~~~~~~~~~~d 140 (228)
T 1h1y_A 70 HLMVTNPSDYVEPLAKAGASGFTF--HIEVS----RDNWQELIQSIKAK---GMRPGVSLRPGTPVEEVFPLVEAENPVE 140 (228)
T ss_dssp EEESSCGGGGHHHHHHHTCSEEEE--EGGGC----TTTHHHHHHHHHHT---TCEEEEEECTTSCGGGGHHHHHSSSCCS
T ss_pred EEEecCHHHHHHHHHHcCCCEEEE--CCCCc----ccHHHHHHHHHHHc---CCCEEEEEeCCCCHHHHHHHHhcCCCCC
Confidence 543 332 4588889999999999 44321 122 3344444332 4555555455677677777776 999
Q ss_pred EEEEchH
Q 018919 284 GIFIGRP 290 (349)
Q Consensus 284 ~V~ig~~ 290 (349)
.|.+++-
T Consensus 141 ~vl~~sv 147 (228)
T 1h1y_A 141 LVLVMTV 147 (228)
T ss_dssp EEEEESS
T ss_pred EEEEEee
Confidence 9999764
No 282
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.12 E-value=0.64 Score=42.58 Aligned_cols=180 Identities=13% Similarity=0.145 Sum_probs=103.0
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+.-.+-.+.+.-..+++-.-+.|+.+++ ++ +...+.+|-.+ . .. .+.+...-. .+-...
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~a 85 (292)
T 2ojp_A 7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGA-NATAEA 85 (292)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHH
T ss_pred eeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-ccHHHH
Confidence 5556676433323444445677777778876654 32 23456665322 1 22 345555533 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+.. |. |.-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 86 i~la~~a~~~Gadavlv~~--P~-----------y~~~------------s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 140 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVT--PY-----------YNRP------------SQEGLYQHFKAIAEHTDLPQILYNVPSRTG 140 (292)
T ss_dssp HHHHHHTTTSSCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHTTCSSCEEEECCHHHHS
T ss_pred HHHHHHHHhcCCCEEEECC--CC-----------CCCC------------CHHHHHHHHHHHHHhcCCCEEEEeCcchhc
Confidence 7888888899999987642 31 1101 111 255677777888999998664
Q ss_pred --cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchH
Q 018919 213 --LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 290 (349)
Q Consensus 213 --~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~ 290 (349)
.+++...++.+. ..|+-. .+. ..++..+.++.+..++++.|+ +|- ...++.++.+|+++++-+.+
T Consensus 141 ~~l~~~~~~~La~~--pnivgi------K~s-~gd~~~~~~~~~~~~~~f~v~-~G~---d~~~~~~l~~G~~G~is~~~ 207 (292)
T 2ojp_A 141 CDLLPETVGRLAKV--KNIIGI------XEA-TGNLTRVNQIKELVSDDFVLL-SGD---DASALDFMQYGGHGVISVTA 207 (292)
T ss_dssp CCCCHHHHHHHHTS--TTEEEC-------CC-SCCTHHHHHHHTTSCTTSBCE-ESC---GGGHHHHHHTTCCEEEESGG
T ss_pred cCCCHHHHHHHHcC--CCEEEE------eCC-CCCHHHHHHHHHhcCCCEEEE-ECc---HHHHHHHHHCCCcEEEeCHH
Confidence 466777777653 333211 111 112344455555444455554 331 24467889999999999875
Q ss_pred H
Q 018919 291 V 291 (349)
Q Consensus 291 ~ 291 (349)
.
T Consensus 208 n 208 (292)
T 2ojp_A 208 N 208 (292)
T ss_dssp G
T ss_pred H
Confidence 4
No 283
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=96.11 E-value=0.13 Score=46.14 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=42.9
Q ss_pred HHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH----------HHHHHHHhCCCEEEEchH
Q 018919 221 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGIFIGRP 290 (349)
Q Consensus 221 a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~----------dv~kal~~GA~~V~ig~~ 290 (349)
..+.|.++++.+. .+ +.++++.++ +.+++.+|||+... .+.+++..|||.+.+||+
T Consensus 158 ~~~~G~~g~V~~~------------~e-i~~lr~~~~-~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 223 (245)
T 1eix_A 158 TQKCGLDGVVCSA------------QE-AVRFKQVFG-QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRP 223 (245)
T ss_dssp HHHTTCSEEECCG------------GG-HHHHHHHHC-SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHH
T ss_pred HHHcCCCeEEeCH------------HH-HHHHHHhcC-CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHH
Confidence 5668888865531 23 556666654 46899999998531 366788999999999999
Q ss_pred HHH
Q 018919 291 VVY 293 (349)
Q Consensus 291 ~l~ 293 (349)
++.
T Consensus 224 I~~ 226 (245)
T 1eix_A 224 VTQ 226 (245)
T ss_dssp HHT
T ss_pred HcC
Confidence 874
No 284
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=96.09 E-value=0.029 Score=53.85 Aligned_cols=118 Identities=8% Similarity=-0.004 Sum_probs=84.6
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK 210 (349)
+++.+.+.++++.+.|++.+.+++..+ +.+. .+.++.+|+.+ ++++.+.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~----------------------------~~~~~~e~v~avr~a~g~~~~l~vD 216 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA----------------------------PIEEDRMRIEAVLEEIGKDAQLAVD 216 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS----------------------------CHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC----------------------------CHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 566677778888889999999887541 1222 56788999876 5788875
Q ss_pred Ee--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC---
Q 018919 211 GV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG--- 281 (349)
Q Consensus 211 ~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G--- 281 (349)
.- -+.+++ +.+.+.|++.|- + ...+..++.+.++++.+ ++||++++.+.+..|+.+++..|
T Consensus 217 an~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~~ 286 (392)
T 1tzz_A 217 ANGRFNLETGIAYAKMLRDYPLFWYE-------E-VGDPLDYALQAALAEFY--PGPMATGENLFSHQDARNLLRYGGMR 286 (392)
T ss_dssp CTTCCCHHHHHHHHHHHTTSCCSEEE-------C-CSCTTCHHHHHHHTTTC--CSCEEECTTCCSHHHHHHHHHHSCCC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeec-------C-CCChhhHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHcCCCc
Confidence 42 345554 445567777652 1 01133567777776655 79999999999999999999988
Q ss_pred --CCEEEEch
Q 018919 282 --ASGIFIGR 289 (349)
Q Consensus 282 --A~~V~ig~ 289 (349)
+|.|++--
T Consensus 287 ~~~d~v~ik~ 296 (392)
T 1tzz_A 287 PDRDWLQFDC 296 (392)
T ss_dssp TTTCEECCCT
T ss_pred cCCcEEEECc
Confidence 89999853
No 285
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=96.07 E-value=0.094 Score=50.13 Aligned_cols=119 Identities=14% Similarity=0.127 Sum_probs=85.7
Q ss_pred CChhHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEE
Q 018919 133 KDRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPIL 208 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~-G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~ 208 (349)
.+++.+.+.+++..+. |+..+-+.++.. +++. .+.++.+|+.+ +.++.
T Consensus 147 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~----------------------------~~~~d~~~v~avR~a~g~~~~l~ 198 (383)
T 3i4k_A 147 LPLDVAVAEIEERIEEFGNRSFKLKMGAG----------------------------DPAEDTRRVAELAREVGDRVSLR 198 (383)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCSS----------------------------CHHHHHHHHHHHHHTTTTTSEEE
T ss_pred CCHHHHHHHHHHHHHhcCCcEEEEeeCCC----------------------------CHHHHHHHHHHHHHHcCCCCEEE
Confidence 4666666667666666 999998877541 1222 56789999987 47888
Q ss_pred EEEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-
Q 018919 209 VKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG- 281 (349)
Q Consensus 209 vK~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G- 281 (349)
+..- -+.++ ++.+.+.|++.|- + ...+..++.+.++++.. .+||++++.+.+..|+.++++.|
T Consensus 199 vDan~~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~ 268 (383)
T 3i4k_A 199 IDINARWDRRTALHYLPILAEAGVELFE-------Q-PTPADDLETLREITRRT--NVSVMADESVWTPAEALAVVKAQA 268 (383)
T ss_dssp EECTTCSCHHHHHHHHHHHHHTTCCEEE-------S-CSCTTCHHHHHHHHHHH--CCEEEESTTCSSHHHHHHHHHHTC
T ss_pred EECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCChhhHHHHHHHHhhC--CCCEEecCccCCHHHHHHHHHcCC
Confidence 8642 34444 4567778888773 1 11223567778888777 79999999999999999999987
Q ss_pred CCEEEEch
Q 018919 282 ASGIFIGR 289 (349)
Q Consensus 282 A~~V~ig~ 289 (349)
+|.|++--
T Consensus 269 ~d~v~~k~ 276 (383)
T 3i4k_A 269 ADVIALKT 276 (383)
T ss_dssp CSEEEECT
T ss_pred CCEEEEcc
Confidence 89999864
No 286
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=96.07 E-value=0.074 Score=50.52 Aligned_cols=117 Identities=16% Similarity=0.137 Sum_probs=83.7
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++...+.++++.+.|++.+.++++.. .+. .+.++.+|+.+ ++++.+
T Consensus 145 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-----------------------------~~~~~e~v~avr~a~g~~~~l~v 195 (371)
T 2ps2_A 145 GEPEDMRARVAKYRAKGYKGQSVKISGE-----------------------------PVTDAKRITAALANQQPDEFFIV 195 (371)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEECCSC-----------------------------HHHHHHHHHHHTTTCCTTCEEEE
T ss_pred CCHHHHHHHHHHHHHhChheEEeecCCC-----------------------------HHHHHHHHHHHHHhcCCCCEEEE
Confidence 4677777888888899999999887531 122 46788888877 578887
Q ss_pred EEe--cCHHHH----HHH-HHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-
Q 018919 210 KGV--LTAEDA----RIA-VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG- 281 (349)
Q Consensus 210 K~v--~~~~~a----~~a-~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G- 281 (349)
..- -+.+++ +.+ .+.|+ .|- + .-+ .++.+.++++.+ ++||++++.+.+..|+.++++.|
T Consensus 196 Dan~~~~~~~a~~~~~~l~~~~~i-~iE-------~--P~~-~~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~~ 262 (371)
T 2ps2_A 196 DANGKLSVETALRLLRLLPHGLDF-ALE-------A--PCA-TWRECISLRRKT--DIPIIYDELATNEMSIVKILADDA 262 (371)
T ss_dssp ECTTBCCHHHHHHHHHHSCTTCCC-EEE-------C--CBS-SHHHHHHHHTTC--CSCEEESTTCCSHHHHHHHHHHTC
T ss_pred ECCCCcCHHHHHHHHHHHHhhcCC-cCc-------C--CcC-CHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHhCC
Confidence 643 355554 334 44565 431 1 111 567777777665 79999999999999999999976
Q ss_pred CCEEEEchHH
Q 018919 282 ASGIFIGRPV 291 (349)
Q Consensus 282 A~~V~ig~~~ 291 (349)
+|.|++--..
T Consensus 263 ~d~v~ik~~~ 272 (371)
T 2ps2_A 263 AEGIDLKISK 272 (371)
T ss_dssp CSEEEEEHHH
T ss_pred CCEEEechhh
Confidence 7999996543
No 287
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.05 E-value=0.28 Score=44.79 Aligned_cols=205 Identities=21% Similarity=0.273 Sum_probs=108.8
Q ss_pred CCCcceeEcCeec--CcceeecccccccccCChhhHHHHHHHHHcCCeEEec-CCCCCCHHHHHhhCCCceEEEEeecCC
Q 018919 58 KIDMNTTVLGFKI--SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SWSTSSVEEVASTGPGIRFFQLYVYKD 134 (349)
Q Consensus 58 ~~d~s~~l~g~~~--~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~-~~~~~~~e~i~~~~~~~~~~Ql~~~~~ 134 (349)
.-++.+++.+..+ ..|++||-.+ ...+.+.-..+++++++.|.-.+-. .+.+.+ .+ ..||- ..
T Consensus 22 ~~~~~i~i~~~~iG~~~~~vIAgpc--~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprt-------s~--~~f~g---~g 87 (276)
T 1vs1_A 22 RRETVVEVEGVRIGGGSKAVIAGPC--SVESWEQVREAALAVKEAGAHMLRGGAFKPRT-------SP--YSFQG---LG 87 (276)
T ss_dssp CSCCCEEETTEEEBTTBCEEEEECS--BCCCHHHHHHHHHHHHHHTCSEEECBSSCCCS-------ST--TSCCC---CT
T ss_pred CCCcEEEECCEEECCCCeEEEEecC--CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCC-------Ch--hhhcC---CC
Confidence 3455566665544 2478888765 2224444457899999999886532 222111 11 11221 12
Q ss_pred hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCC-cCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEec
Q 018919 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVL 213 (349)
Q Consensus 135 ~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~ 213 (349)
.+....+.+.+++.|...+.==.|. ..-++-..+ ++- ++..++ +.+ ...++++.+ ++.||++|.-.
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~-----~~~~~l~~~-vd~~kIgs~~---~~n---~~ll~~~a~-~~kPV~lk~G~ 154 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDP-----RHVETVSRY-ADMLQIGARN---MQN---FPLLREVGR-SGKPVLLKRGF 154 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCG-----GGHHHHHHH-CSEEEECGGG---TTC---HHHHHHHHH-HTCCEEEECCT
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCH-----HHHHHHHHh-CCeEEECccc---ccC---HHHHHHHHc-cCCeEEEcCCC
Confidence 3444444455567788876411221 111111111 110 011111 111 455666654 69999999864
Q ss_pred --CHHHHHH----HHHcCCCEEEEecCCCCCCCC---chhhHHHHHHHHHHhcCCCcEEEec----CCCC--HHHHHHHH
Q 018919 214 --TAEDARI----AVQAGAAGIIVSNHGARQLDY---VPATIMALEEVVKATQGRIPVFLDG----GVRR--GTDVFKAL 278 (349)
Q Consensus 214 --~~~~a~~----a~~~G~d~I~v~~~gg~~~~~---~~~~~~~l~~i~~~~~~~ipvia~G----GI~~--~~dv~kal 278 (349)
++++... +...|.+-+++--.|.+.... ....+..++.+++.. ++||+++. |.+. ..=.+.++
T Consensus 155 ~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~--~lpVi~dssH~~g~~~~~~~~~~aAv 232 (276)
T 1vs1_A 155 GNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEAT--HLPVIVDPSHPAGRRSLVPALAKAGL 232 (276)
T ss_dssp TCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHB--SSCEEECCHHHHCSGGGHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHh--CCCEEEeCCCCCCccchHHHHHHHHH
Confidence 5665444 445787656554335533211 223566677777655 68998753 3332 23355678
Q ss_pred HhCCCEEEEchHH
Q 018919 279 ALGASGIFIGRPV 291 (349)
Q Consensus 279 ~~GA~~V~ig~~~ 291 (349)
++||++++|-+-+
T Consensus 233 a~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 233 AAGADGLIVEVHP 245 (276)
T ss_dssp HTTCSEEEEEBCS
T ss_pred HcCCCEEEEEecC
Confidence 8999999999865
No 288
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.04 E-value=0.88 Score=41.66 Aligned_cols=107 Identities=18% Similarity=0.283 Sum_probs=75.0
Q ss_pred cCHHHHHHHH-HcCCCEEEEec---CCCCCCCCchh--hHHHHHHHHHHhcCCCcEEEecCCCCH-HHHHHHHHhCCCEE
Q 018919 213 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPA--TIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGI 285 (349)
Q Consensus 213 ~~~~~a~~a~-~~G~d~I~v~~---~gg~~~~~~~~--~~~~l~~i~~~~~~~ipvia~GGI~~~-~dv~kal~~GA~~V 285 (349)
.+|++|+... +.|+|.+-++. ||-+ .+.+ .++.|.+|.+.+ ++|++.=||=..+ +++.+++.+|..-|
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y---~~~p~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~i~~ai~~Gv~Ki 229 (286)
T 1gvf_A 155 TDPQEAKRFVELTGVDSLAVAIGTAHGLY---SKTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIELGVTKV 229 (286)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSCC---SSCCCCCHHHHHHHHHHC--CSCEEECCCTTCCHHHHHHHHHTTEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEeecCccccCc---CCCCccCHHHHHHHHHhc--CCCEEEECCCCCCHHHHHHHHHCCCeEE
Confidence 4688887766 69999999873 5543 2333 578999999987 7999988865555 45778999999999
Q ss_pred EEchHHHHHHhh-------cC-----H-HHHHHHHHHHHHHHHHHHHHcCCC
Q 018919 286 FIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 324 (349)
Q Consensus 286 ~ig~~~l~~~~~-------~G-----~-~gv~~~l~~l~~el~~~m~~~G~~ 324 (349)
=|+|-+.++... .. + .-+....+.+++.++..|..+|..
T Consensus 230 Ni~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 281 (286)
T 1gvf_A 230 NVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSA 281 (286)
T ss_dssp EECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEChHHHHHHHHHHHHHHHhCcccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999977554321 11 1 123334456777777788888764
No 289
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=96.04 E-value=0.53 Score=43.08 Aligned_cols=176 Identities=18% Similarity=0.209 Sum_probs=103.5
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+. .+-.+.++-..+++-.-+.|+.+++ ++ ....+.+|-.+ . .. -+.+...-. .+-...
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~a 84 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGS-NCTEEA 84 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SSHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHH
Confidence 45566665 4434555556777777788886654 33 23456665322 1 22 344555432 455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe-----
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV----- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v----- 212 (349)
.++++.+++.|++++.+- .|.. .-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 85 i~la~~a~~~Gadavlv~--~P~y-----------~~~------------s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 139 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSI--TPYY-----------NKP------------TQEGLRKHFGKVAESINLPIVLYNVPSRTA 139 (289)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------SCC------------CHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------CCC------------CHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 888999999999998764 2321 101 111 256677888888999998664
Q ss_pred --cCHHHHHHHH-HcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 --LTAEDARIAV-QAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 --~~~~~a~~a~-~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++. +.. +-+|.-+. | ++..+.++.+.. ++.|+ +|. -.-++.++.+|++++.-+
T Consensus 140 ~~l~~~~~~~La~~~pnivgiK~s~--g--------d~~~~~~~~~~~--~f~v~-~G~---d~~~~~~l~~G~~G~is~ 203 (289)
T 2yxg_A 140 VNLEPKTVKLLAEEYSNISAVKEAN--P--------NLSQVSELIHDA--KITVL-SGN---DELTLPIIALGGKGVISV 203 (289)
T ss_dssp CCCCHHHHHHHHHHCTTEEEEEECC--S--------CTHHHHHHHHHT--CSEEE-ESC---GGGHHHHHHTTCCEEEES
T ss_pred cCCCHHHHHHHHHhCCCEEEEEeCC--C--------CHHHHHHHHHhC--CeEEE-ECc---HHHHHHHHHCCCCEEEeC
Confidence 4677777776 532 33333321 1 123344454443 45553 442 234677899999999998
Q ss_pred hHH
Q 018919 289 RPV 291 (349)
Q Consensus 289 ~~~ 291 (349)
.+-
T Consensus 204 ~~n 206 (289)
T 2yxg_A 204 VAN 206 (289)
T ss_dssp GGG
T ss_pred hhh
Confidence 853
No 290
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=96.03 E-value=0.11 Score=50.12 Aligned_cols=128 Identities=8% Similarity=-0.028 Sum_probs=90.7
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++++-+++++... +-. .+.+. .+.++.+|+.+ +.+|.+
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~-----dg~-----------------~~~~~die~v~avReavG~d~~L~v 235 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPK-----DGM-----------------PGMRENLKRVEAVREVIGYDNDLML 235 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGG-----GHH-----------------HHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcc-----ccc-----------------chHHHHHHHHHHHHHHcCCCCeEEE
Confidence 467778888888888999999998865210 000 01122 56789999987 578888
Q ss_pred EEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.. .+||++++.+.+..|+.++++.| +
T Consensus 236 DaN~~~~~~~Ai~~~~~Le~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~li~~~a~ 305 (412)
T 3stp_A 236 ECYMGWNLDYAKRMLPKLAPYEPRWLEE--------PVIADDVAGYAELNAMN--IVPISGGEHEFSVIGCAELINRKAV 305 (412)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHTC--SSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhCC--CCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 643 34555 45566788887731 11233577788888766 79999999999999999999986 7
Q ss_pred CEEEEchHHH
Q 018919 283 SGIFIGRPVV 292 (349)
Q Consensus 283 ~~V~ig~~~l 292 (349)
|.|++--..+
T Consensus 306 D~v~ik~~~~ 315 (412)
T 3stp_A 306 SVLQYDTNRV 315 (412)
T ss_dssp SEECCCHHHH
T ss_pred CEEecChhhc
Confidence 9999876543
No 291
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.01 E-value=0.082 Score=45.62 Aligned_cols=118 Identities=18% Similarity=0.118 Sum_probs=68.9
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc-CCcEEE--E
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT-KLPILV--K 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~pv~v--K 210 (349)
+.+...+.++.+.+ |++.+.++... + .+.+ .+.++++++.+ +.|+++ |
T Consensus 11 ~~~~~~~~~~~~~~-~v~~iev~~~~-------------~-~~~g--------------~~~i~~l~~~~~~~~i~~~l~ 61 (207)
T 3ajx_A 11 STEAALELAGKVAE-YVDIIELGTPL-------------I-KAEG--------------LSVITAVKKAHPDKIVFADMK 61 (207)
T ss_dssp CHHHHHHHHHHHGG-GCSEEEECHHH-------------H-HHHC--------------THHHHHHHHHSTTSEEEEEEE
T ss_pred CHHHHHHHHHHhhc-cCCEEEECcHH-------------H-HhhC--------------HHHHHHHHHhCCCCeEEEEEE
Confidence 45556666666665 78988875421 0 0000 25788898887 789885 7
Q ss_pred EecC-HHH-HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEE-ecCCCCHHHHHHH-HHhCCCEEE
Q 018919 211 GVLT-AED-ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL-DGGVRRGTDVFKA-LALGASGIF 286 (349)
Q Consensus 211 ~v~~-~~~-a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia-~GGI~~~~dv~ka-l~~GA~~V~ 286 (349)
. .+ ++. ++.+.++|+|+|+++...+ ......+.+..+.. .+++.+ .-...++.+.++. ...|+|.|.
T Consensus 62 ~-~di~~~~~~~a~~~Gad~v~vh~~~~------~~~~~~~~~~~~~~--g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~ 132 (207)
T 3ajx_A 62 T-MDAGELEADIAFKAGADLVTVLGSAD------DSTIAGAVKAAQAH--NKGVVVDLIGIEDKATRAQEVRALGAKFVE 132 (207)
T ss_dssp E-CSCHHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHTTCSEEE
T ss_pred e-cCccHHHHHHHHhCCCCEEEEeccCC------hHHHHHHHHHHHHc--CCceEEEEecCCChHHHHHHHHHhCCCEEE
Confidence 4 45 555 8999999999999953221 12222222222222 344422 2233377774444 457999995
Q ss_pred Ech
Q 018919 287 IGR 289 (349)
Q Consensus 287 ig~ 289 (349)
+..
T Consensus 133 ~~~ 135 (207)
T 3ajx_A 133 MHA 135 (207)
T ss_dssp EEC
T ss_pred EEe
Confidence 543
No 292
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.98 E-value=0.035 Score=48.31 Aligned_cols=112 Identities=19% Similarity=0.231 Sum_probs=80.6
Q ss_pred ecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEE
Q 018919 131 VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVK 210 (349)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK 210 (349)
...|.+...+.++.+.+.|++.+.++...+ ...+.++++++.+++|++++
T Consensus 14 ~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~------------------------------~~~~~i~~i~~~~~~~l~vg 63 (212)
T 2v82_A 14 RGITPDEALAHVGAVIDAGFDAVEIPLNSP------------------------------QWEQSIPAIVDAYGDKALIG 63 (212)
T ss_dssp TTCCHHHHHHHHHHHHHHTCCEEEEETTST------------------------------THHHHHHHHHHHHTTTSEEE
T ss_pred eCCCHHHHHHHHHHHHHCCCCEEEEeCCCh------------------------------hHHHHHHHHHHhCCCCeEEE
Confidence 346777788889999999999998765322 11356788887788888774
Q ss_pred --EecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 211 --GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 211 --~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+.+.+.++.+.++|+|+|.+.. ...+.+ +.++.+ ..+++.. +++.+++.++..+|+|.|.+
T Consensus 64 ~g~~~~~~~i~~a~~~Gad~V~~~~----------~~~~~~-~~~~~~--g~~~~~g--~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 64 AGTVLKPEQVDALARMGCQLIVTPN----------IHSEVI-RRAVGY--GMTVCPG--CATATEAFTALEAGAQALKI 127 (212)
T ss_dssp EECCCSHHHHHHHHHTTCCEEECSS----------CCHHHH-HHHHHT--TCEEECE--ECSHHHHHHHHHTTCSEEEE
T ss_pred eccccCHHHHHHHHHcCCCEEEeCC----------CCHHHH-HHHHHc--CCCEEee--cCCHHHHHHHHHCCCCEEEE
Confidence 34678899999999999996321 012233 233333 4555543 89999999999999999997
No 293
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.97 E-value=0.46 Score=43.23 Aligned_cols=132 Identities=23% Similarity=0.268 Sum_probs=81.6
Q ss_pred hHHHHHHHHHcCCeEEecCCC------------CCCHHHHHh-------hCCCc-eEEEE-ee-cCChhHHHHHHHHHHH
Q 018919 90 EYATARAASAAGTIMTLSSWS------------TSSVEEVAS-------TGPGI-RFFQL-YV-YKDRNVVAQLVRRAER 147 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~~------------~~~~e~i~~-------~~~~~-~~~Ql-~~-~~~~~~~~~~~~~~~~ 147 (349)
|...|+.+.++|+..++...+ ..+++|+.. ..+.. ...-+ |+ ..+++...+.+.++.+
T Consensus 38 Da~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~k 117 (275)
T 3vav_A 38 DASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASAVKLMR 117 (275)
T ss_dssp SHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 458999999999998864322 235666432 22222 22222 11 2466666666777777
Q ss_pred cCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe--------------
Q 018919 148 AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV-------------- 212 (349)
Q Consensus 148 ~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v-------------- 212 (349)
+|++++-|- | ... .+.|+.+++ .++|++--.-
T Consensus 118 aGa~aVklE-d-------------------------------g~~~~~~i~~l~~-~GIpv~gHlgltPq~~~~~gg~~v 164 (275)
T 3vav_A 118 AGAQMVKFE-G-------------------------------GEWLAETVRFLVE-RAVPVCAHVGLTPQSVHAFGGFKV 164 (275)
T ss_dssp TTCSEEEEE-C-------------------------------CGGGHHHHHHHHH-TTCCEEEEEESCGGGHHHHC---C
T ss_pred cCCCEEEEC-C-------------------------------chhHHHHHHHHHH-CCCCEEEecCCCceEEeccCCeEE
Confidence 888886542 1 111 456777765 3777763221
Q ss_pred --cC-------HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEec
Q 018919 213 --LT-------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 266 (349)
Q Consensus 213 --~~-------~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 266 (349)
.+ .++|+.+.++|||.|++- +.++ +...++.+.+ ++|+|+-|
T Consensus 165 qgrt~~~a~~~i~rA~a~~eAGA~~ivlE---------~vp~-~~a~~It~~l--~iP~igIG 215 (275)
T 3vav_A 165 QGKTEAGAAQLLRDARAVEEAGAQLIVLE---------AVPT-LVAAEVTREL--SIPTIGIG 215 (275)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTCSEEEEE---------SCCH-HHHHHHHHHC--SSCEEEES
T ss_pred EcCCHHHHHHHHHHHHHHHHcCCCEEEec---------CCCH-HHHHHHHHhC--CCCEEEEc
Confidence 11 256888999999999983 2333 3677888888 79999765
No 294
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=95.93 E-value=0.75 Score=42.44 Aligned_cols=114 Identities=17% Similarity=0.125 Sum_probs=78.8
Q ss_pred cCHHHHHHHHHcCCCEEEEec---CCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH-HHHHHHHhCCCEEEEc
Q 018919 213 LTAEDARIAVQAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT-DVFKALALGASGIFIG 288 (349)
Q Consensus 213 ~~~~~a~~a~~~G~d~I~v~~---~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~-dv~kal~~GA~~V~ig 288 (349)
.+|++|+...+.|+|.+-++. ||-+....-.-.++.|.+|.+.++.++|++.=||=..+. ++.+++.+|..-|=|+
T Consensus 172 T~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~ 251 (306)
T 3pm6_A 172 TTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVN 251 (306)
T ss_dssp CCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEES
T ss_pred CCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeC
Confidence 468999988899999888763 554311111225788999998885579999988866655 4778999999999999
Q ss_pred hHHHHHHhh--------cCH-HHHHHHHHHHHHHHHHHHHHcCCCCh
Q 018919 289 RPVVYSLAA--------EGE-KGVRRVLEMLREEFELAMALSGCRSL 326 (349)
Q Consensus 289 ~~~l~~~~~--------~G~-~gv~~~l~~l~~el~~~m~~~G~~~i 326 (349)
|-+..+... ... .-+....+.+++.++..|..+|...-
T Consensus 252 Tdl~~a~~~~~r~~~~~~~~~~~~~~~~~a~~~~v~~~i~~fgs~gk 298 (306)
T 3pm6_A 252 RAVNNEYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGK 298 (306)
T ss_dssp HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTTG
T ss_pred hHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 976543211 011 11233345677777888899887653
No 295
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.92 E-value=1 Score=41.47 Aligned_cols=180 Identities=13% Similarity=0.178 Sum_probs=106.0
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
.|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ ++ +.+.+.+|..+ . .. -+.+...- ..+-..
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 98 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAH 98 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHH
Confidence 36667777533333445555777777788986554 32 23456665322 1 22 34555543 346677
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
..++++.+++.|++++.+.. |. |.-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 99 ai~la~~a~~~Gadavlv~~--P~-----------y~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~t 153 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVVT--PY-----------YSKP------------PQRGLQAHFTAVADATELPMLLYDIPGRS 153 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHTSCSSCEEEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEEECC--CC-----------CCCC------------CHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 78899999999999987642 31 1101 111 256678888888999998764
Q ss_pred ---cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 ---LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 ---~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++.+.. +-+|.-+. + ++..+.++.. +.++.|+ +|- ..-++.++.+||+++.-+
T Consensus 154 g~~l~~~~~~~La~~pnIvgiKdss--------g--d~~~~~~~~~--~~~f~v~-~G~---d~~~l~~l~~Ga~G~is~ 217 (304)
T 3l21_A 154 AVPIEPDTIRALASHPNIVGVXDAK--------A--DLHSGAQIMA--DTGLAYY-SGD---DALNLPWLRMGATGFISV 217 (304)
T ss_dssp SSCCCHHHHHHHHTSTTEEEEEECS--------C--CHHHHHHHHH--HHCCEEE-ESS---GGGHHHHHHHTCCEEEES
T ss_pred CCCCCHHHHHHHhcCCCEEEEECCC--------C--CHHHHHHHhc--CCCeEEE-eCc---hHHHHHHHHcCCCEEEec
Confidence 4567777776532 22333221 1 2333333332 2256664 442 244678899999999988
Q ss_pred hHHHH
Q 018919 289 RPVVY 293 (349)
Q Consensus 289 ~~~l~ 293 (349)
.+-++
T Consensus 218 ~~n~~ 222 (304)
T 3l21_A 218 IAHLA 222 (304)
T ss_dssp THHHH
T ss_pred HHhhh
Confidence 85543
No 296
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.90 E-value=0.022 Score=51.81 Aligned_cols=41 Identities=24% Similarity=0.562 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCCcEEEE-EecCHHHHHHHHHcCCCEEEEec
Q 018919 193 DEDVKWLQTITKLPILVK-GVLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK-~v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
++.++++++..++||++. ++.+++++..+.++|||+|.|.+
T Consensus 167 ~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 167 PLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp HHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 567889988889999987 57789999999999999999954
No 297
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.87 E-value=0.7 Score=41.79 Aligned_cols=133 Identities=20% Similarity=0.244 Sum_probs=80.9
Q ss_pred hHHHHHHHHHcCCeEEecCCC------------CCCHHHHHh-------hCCCceEE-EE-ee-cCChhHHHHHHHHHHH
Q 018919 90 EYATARAASAAGTIMTLSSWS------------TSSVEEVAS-------TGPGIRFF-QL-YV-YKDRNVVAQLVRRAER 147 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~~------------~~~~e~i~~-------~~~~~~~~-Ql-~~-~~~~~~~~~~~~~~~~ 147 (349)
|..+|+.+.++|+..++...| ..+++|+.. ..+.++.+ -+ |+ ..+++...+.+.++.+
T Consensus 26 D~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~k 105 (264)
T 1m3u_A 26 DYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMR 105 (264)
T ss_dssp SHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHHHHHH
Confidence 558999999999998764211 235666532 22322222 11 11 1256666666677778
Q ss_pred cCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEE---------------e
Q 018919 148 AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKG---------------V 212 (349)
Q Consensus 148 ~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~---------------v 212 (349)
+|++++-| ..- .+..+.|+.+.+. ++||+--. .
T Consensus 106 aGa~aVkl--Egg-----------------------------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~v~ 153 (264)
T 1m3u_A 106 AGANMVKI--EGG-----------------------------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYKVQ 153 (264)
T ss_dssp TTCSEEEC--CCS-----------------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSCCC
T ss_pred cCCCEEEE--CCc-----------------------------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCCeEEE
Confidence 88888643 210 0124667777663 78886221 1
Q ss_pred -cC-------HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEec
Q 018919 213 -LT-------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 266 (349)
Q Consensus 213 -~~-------~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 266 (349)
.+ .++|+.+.++|||.|++-. .+ .+...++.+.+ ++|+|+-|
T Consensus 154 grt~~~a~~~i~rA~a~~eAGA~~ivlE~---------vp-~~~a~~it~~l--~iP~igIG 203 (264)
T 1m3u_A 154 GRGDEAGDQLLSDALALEAAGAQLLVLEC---------VP-VELAKRITEAL--AIPVIGIG 203 (264)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTCCEEEEES---------CC-HHHHHHHHHHC--SSCEEEES
T ss_pred eCCHHHHHHHHHHHHHHHHCCCcEEEEec---------CC-HHHHHHHHHhC--CCCEEEeC
Confidence 12 2568889999999999832 22 25677888887 79999765
No 298
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=95.86 E-value=0.39 Score=44.61 Aligned_cols=177 Identities=14% Similarity=0.105 Sum_probs=104.1
Q ss_pred ceeeccc-ccccccCChhhHHHHHHHHHcCCeEEec-----CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 73 PIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLS-----SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 73 Pi~iApm-~~~~l~~~~~~~~la~aa~~~G~~~~~~-----~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
|.++.|+ .-.+-.+.++-..+++-.-+.|+.+++- +....+.+|-.+ . .. -+.+...- . +-..
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~-st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG-Y-SVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC-c-CHHH
Confidence 5556676 4323234444557777777889876652 233456665322 1 22 34556653 3 5566
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe---c
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---L 213 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---~ 213 (349)
..++++.+++.|++++.+- .|.. .-| +++ ..+..+.+.+.+++||++=.. .
T Consensus 95 ai~la~~A~~~Gadavlv~--~P~y-----------~~~------------s~~~l~~~f~~va~a~~lPiilYn~tg~l 149 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIH--QPVH-----------PYI------------TDAGAVEYYRNIIEALDAPSIIYFKDAHL 149 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCC-----------SCC------------CHHHHHHHHHHHHHHSSSCEEEEECCTTS
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCC-----------CCC------------CHHHHHHHHHHHHHhCCCCEEEEeCCCCc
Confidence 7788999999999998763 2321 101 111 256677888888999988541 4
Q ss_pred CHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcC--CCcEEEecCCCCHH-HHHHHHHhCCCEEEEch
Q 018919 214 TAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQG--RIPVFLDGGVRRGT-DVFKALALGASGIFIGR 289 (349)
Q Consensus 214 ~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~--~ipvia~GGI~~~~-dv~kal~~GA~~V~ig~ 289 (349)
+++...++.+.. +-+|.-+. .++..+.++.+.+++ ++.| .+|- .. .++.++.+||+++.-+.
T Consensus 150 ~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~~f~v-~~G~---d~~~~~~~l~~G~~G~is~~ 215 (314)
T 3d0c_A 150 SDDVIKELAPLDKLVGIKYAI----------NDIQRVTQVMRAVPKSSNVAF-ICGT---AEKWAPFFYHAGAVGFTSGL 215 (314)
T ss_dssp CTHHHHHHTTCTTEEEEEECC----------CCHHHHHHHHHHSCGGGCCEE-EETT---HHHHHHHHHHHTCCEEEESG
T ss_pred CHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCCEEE-EEeC---cHHHHHHHHHcCCCEEEecH
Confidence 567766665431 22333221 134455566665544 4554 3442 23 46788999999999987
Q ss_pred H
Q 018919 290 P 290 (349)
Q Consensus 290 ~ 290 (349)
+
T Consensus 216 a 216 (314)
T 3d0c_A 216 V 216 (314)
T ss_dssp G
T ss_pred H
Confidence 4
No 299
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=95.86 E-value=0.05 Score=52.01 Aligned_cols=118 Identities=12% Similarity=0.052 Sum_probs=83.5
Q ss_pred CCh---hHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCc
Q 018919 133 KDR---NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLP 206 (349)
Q Consensus 133 ~~~---~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~p 206 (349)
.++ +.+.+.++++.+.|++++.+++..+ +.+. .+.++.+|+.+ +.+
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~----------------------------~~~~d~e~v~avR~a~G~d~~ 186 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGGT----------------------------SFKEDVRHINALQHTAGSSIT 186 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSSS----------------------------CHHHHHHHHHHHHHHHCTTSE
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCCC----------------------------CHHHHHHHHHHHHHhhCCCCE
Confidence 456 7777788888889999999887531 1222 56789999887 578
Q ss_pred EEEEEe--cCHHHH----HHHHHc-CCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 018919 207 ILVKGV--LTAEDA----RIAVQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 279 (349)
Q Consensus 207 v~vK~v--~~~~~a----~~a~~~-G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~ 279 (349)
+.+..- -+.+++ +.+.+. |++.|- + ...+..++.+.++++.+ ++||++++.+.+..++.++++
T Consensus 187 l~vDan~~~~~~~a~~~~~~l~~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 256 (382)
T 2gdq_A 187 MILDANQSYDAAAAFKWERYFSEWTNIGWLE-------E-PLPFDQPQDYAMLRSRL--SVPVAGGENMKGPAQYVPLLS 256 (382)
T ss_dssp EEEECTTCCCHHHHHTTHHHHTTCSCEEEEE-------C-CSCSSCHHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhhccCCeEEE-------C-CCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH
Confidence 887642 355554 444455 655542 0 01123567777777665 799999999999999999999
Q ss_pred hC-CCEEEEc
Q 018919 280 LG-ASGIFIG 288 (349)
Q Consensus 280 ~G-A~~V~ig 288 (349)
.| +|.|++-
T Consensus 257 ~~~~d~v~ik 266 (382)
T 2gdq_A 257 QRCLDIIQPD 266 (382)
T ss_dssp TTCCSEECCC
T ss_pred cCCCCEEecC
Confidence 76 8999884
No 300
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.85 E-value=0.13 Score=44.90 Aligned_cols=154 Identities=15% Similarity=0.113 Sum_probs=90.5
Q ss_pred HHHHHHHHcCCeEE--e-cCCCC--CCHHHH---HhhCC-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018919 92 ATARAASAAGTIMT--L-SSWST--SSVEEV---ASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (349)
Q Consensus 92 ~la~aa~~~G~~~~--~-~~~~~--~~~e~i---~~~~~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~ 162 (349)
.=+++|.++|..++ + -..|+ .+++.. .+..| ....+-+|.+.+.+. ..+.+.+.+.+.+.+|-+-+
T Consensus 12 eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~---i~~~~~~~~ld~vQLHG~e~-- 86 (203)
T 1v5x_A 12 EDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEE---VLRLMEEARLQVAQLHGEEP-- 86 (203)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHH---HHHHHHHTTCSEEEECSCCC--
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHH---HHHHHHhhCCCEEEECCCCC--
Confidence 45667777775432 2 22222 344443 33333 455667777655554 44555678999999874321
Q ss_pred CchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe--cCHHHHHHHHHcCCCEEEEecC-CCCCC
Q 018919 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV--LTAEDARIAVQAGAAGIIVSNH-GARQL 239 (349)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v--~~~~~a~~a~~~G~d~I~v~~~-gg~~~ 239 (349)
.+.++.++. ++|++ |-+ .+.++. .+.+..+|++.+... ||+..
T Consensus 87 ------------------------------~~~~~~l~~--~~~vi-ka~~v~~~~~l-~~~~~~~d~~LlD~~~gGtG~ 132 (203)
T 1v5x_A 87 ------------------------------PEWAEAVGR--FYPVI-KAFPLEGPARP-EWADYPAQALLLDGKRPGSGE 132 (203)
T ss_dssp ------------------------------HHHHHHHTT--TSCEE-EEEECSSSCCG-GGGGSSCSEEEEECSSTTSCC
T ss_pred ------------------------------HHHHHHhcc--CCCEE-EEEEcCChHhh-hhhhcCCCEEEEcCCCCCCCC
Confidence 134555522 57876 443 222333 344445899999864 44321
Q ss_pred CCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHH
Q 018919 240 DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 291 (349)
Q Consensus 240 ~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~ 291 (349)
.-.|+.+.++.. .+.|++..||+ +++.+.+++..++.+|=+.|-+
T Consensus 133 ---~fdW~~l~~~~~---~~~p~~LAGGL-~peNV~~ai~~~p~gVDvsSGv 177 (203)
T 1v5x_A 133 ---AYPRAWAKPLLA---TGRRVILAGGI-APENLEEVLALRPYALDLASGV 177 (203)
T ss_dssp ---CCCGGGGHHHHH---TTSCEEECSSC-CSTTHHHHHHHCCSEEEESGGG
T ss_pred ---ccCHHHHHhhhc---cCCcEEEECCC-CHHHHHHHHhcCCCEEEeCCce
Confidence 112333443211 25799999999 5689989887799999999855
No 301
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=95.84 E-value=0.12 Score=49.52 Aligned_cols=125 Identities=14% Similarity=-0.016 Sum_probs=89.2
Q ss_pred CChhHHHHHH-HHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEE
Q 018919 133 KDRNVVAQLV-RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPIL 208 (349)
Q Consensus 133 ~~~~~~~~~~-~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~ 208 (349)
.+++.+.+.+ +++.+.|++.+-+.++.+... . ..+++. .+.++.+|+.+ +.++.
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~------------~----------~~~~~~d~~~v~avR~a~g~~~~l~ 195 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTR------------C----------DVDIPGDIAKARAVRELLGPDAVIG 195 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC------------C----------SCCHHHHHHHHHHHHHHHCTTCCEE
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc------------c----------ccCHHHHHHHHHHHHHHhCCCCeEE
Confidence 4566777777 777888999999888653210 0 012233 56789999986 67898
Q ss_pred EEEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCC
Q 018919 209 VKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 282 (349)
Q Consensus 209 vK~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA 282 (349)
+..- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.. .+||+++..+.+..|+.++++.|+
T Consensus 196 vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~ 265 (393)
T 4dwd_A 196 FDANNGYSVGGAIRVGRALEDLGYSWFEE--------PVQHYHVGAMGEVAQRL--DITVSAGEQTYTLQALKDLILSGV 265 (393)
T ss_dssp EECTTCCCHHHHHHHHHHHHHTTCSEEEC--------CSCTTCHHHHHHHHHHC--SSEEEBCTTCCSHHHHHHHHHHTC
T ss_pred EECCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcCC
Confidence 8643 34554 45567788887731 11223577788888776 799999999999999999999889
Q ss_pred CEEEEch
Q 018919 283 SGIFIGR 289 (349)
Q Consensus 283 ~~V~ig~ 289 (349)
|.|++--
T Consensus 266 d~v~~k~ 272 (393)
T 4dwd_A 266 RMVQPDI 272 (393)
T ss_dssp CEECCCT
T ss_pred CEEEeCc
Confidence 9999854
No 302
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.81 E-value=0.64 Score=42.93 Aligned_cols=182 Identities=12% Similarity=0.097 Sum_probs=105.5
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------hCC--CceEEEEeecCChhH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------TGP--GIRFFQLYVYKDRNV 137 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~~~--~~~~~Ql~~~~~~~~ 137 (349)
.|-++.|+.-.+-.+.+.-..+++-..+.|+.+++ + +....+.+|..+ ... .+.+...- ..+...
T Consensus 19 ~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ 97 (307)
T 3s5o_A 19 YPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG-CESTQA 97 (307)
T ss_dssp ECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHH
T ss_pred EEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHH
Confidence 35666777433323444445666667778876554 2 334456665322 222 23445543 245666
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
..++++.+++.|++++.+.. |.. .-| + .+.+ ..+..+.+.+.+++||++=.+
T Consensus 98 ai~la~~A~~~Gadavlv~~--P~y-----------~~~-~---------~s~~~l~~~f~~ia~a~~lPiilYn~P~~t 154 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVVT--PCY-----------YRG-R---------MSSAALIHHYTKVADLSPIPVVLYSVPANT 154 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEEC--CCT-----------TGG-G---------CCHHHHHHHHHHHHHHCSSCEEEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcC--CCc-----------CCC-C---------CCHHHHHHHHHHHHhhcCCCEEEEeCCccc
Confidence 77899999999999987632 321 000 0 0111 256678888888999998775
Q ss_pred ---cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHh-cCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 213 ---LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKAT-QGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 213 ---~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~-~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+++...++.+.. +-+|.-+. ..+..+.++.+.. ++++.|+ +|. ...++.++++|++++.-
T Consensus 155 g~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~f~v~-~G~---d~~~l~~l~~G~~G~is 220 (307)
T 3s5o_A 155 GLDLPVDAVVTLSQHPNIVGMXDSG----------GDVTRIGLIVHKTRKQDFQVL-AGS---AGFLMASYALGAVGGVC 220 (307)
T ss_dssp SCCCCHHHHHHHHTSTTEEEEEECS----------CCHHHHHHHHHHTTTSSCEEE-ESS---GGGHHHHHHHTCCEEEC
T ss_pred CCCCCHHHHHHHhcCCCEEEEEcCC----------CCHHHHHHHHHhccCCCeEEE-eCc---HHHHHHHHHcCCCEEEe
Confidence 4667777776532 22222211 1344555555544 2356654 442 23577899999999998
Q ss_pred chHH
Q 018919 288 GRPV 291 (349)
Q Consensus 288 g~~~ 291 (349)
+.+-
T Consensus 221 ~~an 224 (307)
T 3s5o_A 221 ALAN 224 (307)
T ss_dssp GGGG
T ss_pred chhh
Confidence 8753
No 303
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=95.80 E-value=0.11 Score=48.79 Aligned_cols=89 Identities=12% Similarity=0.153 Sum_probs=62.8
Q ss_pred CCceEEEEeec------CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HH
Q 018919 122 PGIRFFQLYVY------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DE 194 (349)
Q Consensus 122 ~~~~~~Ql~~~------~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~ 194 (349)
..+.++.|... .+.+...++++.++++|++.|.++..... +.. .. ..+.+ ++
T Consensus 209 ~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~--------------~~~--~~-----~~~~~~~~ 267 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIV--------------PAR--MN-----VYPGYQVP 267 (340)
T ss_dssp CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSS--------------CCC--CC-----CCTTTTHH
T ss_pred CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcc--------------CCC--CC-----CCccccHH
Confidence 34566666432 23566788999999999999887643211 000 00 01233 78
Q ss_pred HHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcC-CCEEEE
Q 018919 195 DVKWLQTITKLPILVKG-VLTAEDARIAVQAG-AAGIIV 231 (349)
Q Consensus 195 ~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G-~d~I~v 231 (349)
.++++++.+++||++-+ +.++++|+.+++.| ||.|.+
T Consensus 268 ~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 268 FAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp HHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 89999999999998765 46899999999999 999988
No 304
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=95.69 E-value=0.21 Score=47.05 Aligned_cols=120 Identities=18% Similarity=0.150 Sum_probs=84.7
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|+..+-+.+++. ++. .+.++.+|+.+ ++++.+
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~-----------------------------~~~d~~~v~avR~a~g~~~~l~v 188 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTG-----------------------------IEADIARVKAIREAVGFDIKLRL 188 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-----------------------------HHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCC-----------------------------HHHHHHHHHHHHHHcCCCCeEEE
Confidence 4677777888888889999998887542 111 46788999887 577877
Q ss_pred EEe--cCHHHHHH----HHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDARI----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a~~----a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- -+.++|.+ +.+.|++.|- + ...+..++.+.++++.. ++||++++.+.+..|+.++++.| +
T Consensus 189 Dan~~~~~~~a~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~ 258 (354)
T 3jva_A 189 DANQAWTPKDAVKAIQALADYQIELVE-------Q-PVKRRDLEGLKYVTSQV--NTTIMADESCFDAQDALELVKKGTV 258 (354)
T ss_dssp ECTTCSCHHHHHHHHHHTTTSCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHHHTCC
T ss_pred ECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCChhhHHHHHHHHHhC--CCCEEEcCCcCCHHHHHHHHHcCCC
Confidence 642 35565533 3344544442 1 11223567778887776 79999999999999999999975 7
Q ss_pred CEEEEchHH
Q 018919 283 SGIFIGRPV 291 (349)
Q Consensus 283 ~~V~ig~~~ 291 (349)
|.|++--..
T Consensus 259 d~v~~k~~~ 267 (354)
T 3jva_A 259 DVINIKLMK 267 (354)
T ss_dssp SEEEECHHH
T ss_pred CEEEECchh
Confidence 999997544
No 305
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.65 E-value=0.037 Score=54.86 Aligned_cols=232 Identities=17% Similarity=0.192 Sum_probs=110.4
Q ss_pred hcccccccccccC-CCCCCCcceeEc-CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHh
Q 018919 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (349)
Q Consensus 42 ~~~~~~l~p~~l~-~~~~~d~s~~l~-g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~ 119 (349)
+||++.|+|.... ..+++|++|.+- ++.+..|++.|||...+ +..||.+.++.|..+++.. ..+.++.++
T Consensus 11 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~M~tVT------e~~lA~ala~~GGiGvI~~--~~~~e~~a~ 82 (490)
T 4avf_A 11 TFDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDTVT------EARLAIAMAQEGGIGIIHK--NMGIEQQAA 82 (490)
T ss_dssp CGGGEEECCCCBCSCGGGSCCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTSEEEECC--SSCHHHHHH
T ss_pred CcceEEEeCCCCcccccceeeecccccCcccCCCccccchhhhC------HHHHHHHHHHcCCCccccC--CCCHHHHHH
Confidence 6999999998653 345799999986 68899999999997654 5689989888888888853 345554322
Q ss_pred h------CCCceEEEEeecCChh-HHHHHHHHHHHcCCCEEEEecCCCCCC-chhHHhhhh-----------------cC
Q 018919 120 T------GPGIRFFQLYVYKDRN-VVAQLVRRAERAGFKAIALTVDTPRLG-RREADIKNR-----------------FT 174 (349)
Q Consensus 120 ~------~~~~~~~Ql~~~~~~~-~~~~~~~~~~~~G~~~i~i~~d~p~~g-~r~~d~~~~-----------------~~ 174 (349)
. ......-.... -+++ ...+.++.+.+.+...+.|.=+.-..| ...+|++.. ..
T Consensus 83 ~v~~vk~~~~~m~~~~v~-v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~~~~~~V~~vMtp~~~~vt 161 (490)
T 4avf_A 83 EVRKVKKHETAIVRDPVT-VTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVT 161 (490)
T ss_dssp HHHHHHHCCC----------------------------------------------------------------------
T ss_pred HhhhhcccccCcccCceE-eCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhccccCCcHHHHhccCCCCEE
Confidence 1 11111011111 1222 233445555555555543210110001 011222210 00
Q ss_pred CCCcCcccccCC-----------CCCC--ch-----HHHHHHHHHh------cCCcEEEEE-e----cCHHHHHHHHHcC
Q 018919 175 LPPFLTLKNFQG-----------LDLG--KM-----DEDVKWLQTI------TKLPILVKG-V----LTAEDARIAVQAG 225 (349)
Q Consensus 175 ~p~~~~~~~~~~-----------~~~~--~~-----~~~i~~i~~~------~~~pv~vK~-v----~~~~~a~~a~~~G 225 (349)
++++........ ..|. .+ .+++.+..+. .+..+.+.. + ...+.++.+.++|
T Consensus 162 v~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG 241 (490)
T 4avf_A 162 AREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAAG 241 (490)
T ss_dssp ---------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTT
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhhcc
Confidence 011000000000 0110 00 0111111100 011111111 1 2247789999999
Q ss_pred CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 226 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 226 ~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
+|.|.+....+ ......+.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 242 ~d~I~id~a~g----~~~~~~~~v~~i~~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 242 VDVVVVDTAHG----HSKGVIERVRWVKQTFP-DVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp CSEEEEECSCC----SBHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred cceEEecccCC----cchhHHHHHHHHHHHCC-CceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 99999864322 13445678888887763 678887 77999999999999999999985
No 306
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.64 E-value=0.2 Score=43.18 Aligned_cols=118 Identities=16% Similarity=0.083 Sum_probs=72.0
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHh-cCCcEEEEEe
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTI-TKLPILVKGV 212 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~pv~vK~v 212 (349)
+.+...+.++.+. .|++.++++. |.. +..+ .+.++++|+. .+.||.+-..
T Consensus 11 ~~~~~~~~~~~~~-~~~diie~G~--p~~------~~~g--------------------~~~i~~ir~~~~~~~i~~~~~ 61 (211)
T 3f4w_A 11 TLPEAMVFMDKVV-DDVDIIEVGT--PFL------IREG--------------------VNAIKAIKEKYPHKEVLADAK 61 (211)
T ss_dssp CHHHHHHHHHHHG-GGCSEEEECH--HHH------HHHT--------------------THHHHHHHHHCTTSEEEEEEE
T ss_pred CHHHHHHHHHHhh-cCccEEEeCc--HHH------Hhcc--------------------HHHHHHHHHhCCCCEEEEEEE
Confidence 4555666666664 5888888754 210 0000 3678999988 4889865433
Q ss_pred --cCHHH-HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEe-cCCCCHHH-HHHHHHhCCCEEEE
Q 018919 213 --LTAED-ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD-GGVRRGTD-VFKALALGASGIFI 287 (349)
Q Consensus 213 --~~~~~-a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~-GGI~~~~d-v~kal~~GA~~V~i 287 (349)
...+. ++.+.++|+|+|++.... ....+..+.+..+.. .++++.+ -+..++.+ +.++..+|+|.|.+
T Consensus 62 ~~~~~~~~~~~~~~~Gad~v~v~~~~------~~~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v 133 (211)
T 3f4w_A 62 IMDGGHFESQLLFDAGADYVTVLGVT------DVLTIQSCIRAAKEA--GKQVVVDMICVDDLPARVRLLEEAGADMLAV 133 (211)
T ss_dssp ECSCHHHHHHHHHHTTCSEEEEETTS------CHHHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHHTCCEEEE
T ss_pred eccchHHHHHHHHhcCCCEEEEeCCC------ChhHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHcCCCEEEE
Confidence 33454 899999999999994321 112223222222333 4666653 45666644 66677899999887
Q ss_pred c
Q 018919 288 G 288 (349)
Q Consensus 288 g 288 (349)
.
T Consensus 134 ~ 134 (211)
T 3f4w_A 134 H 134 (211)
T ss_dssp E
T ss_pred c
Confidence 5
No 307
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.64 E-value=0.026 Score=54.40 Aligned_cols=67 Identities=27% Similarity=0.383 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+.++.++++|+|.|++..+.|. .....+.+.++++.+ ++||++ |++.+.+++.++..+|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~----~~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS----BHHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 68899999999999988533221 122356666666554 688886 67999999999999999999996
No 308
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=95.61 E-value=0.081 Score=51.53 Aligned_cols=133 Identities=16% Similarity=0.148 Sum_probs=90.5
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++++-+.+.+|... ..+. .|. ..+.+. .+.++.+|+.+ +++|.+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~------~~G~-~~~---------~~~~~~d~e~v~avR~avG~d~~L~v 208 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTL------RGGH-MPA---------MTDISLSVEFCRKIRAAVGDKADLLF 208 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBT------TCCB-CCC---------HHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCccc------ccCC-Ccc---------hhhHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4677777888888889999999888765210 0000 000 001122 56789999887 578877
Q ss_pred EEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- .+.++| +.+.+.|++.|-= ...+..++.+.++++.+ .+||++++.+.+..|+.++++.| +
T Consensus 209 Dan~~~t~~~A~~~~~~Le~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~g~~ 278 (433)
T 3rcy_A 209 GTHGQFTTAGAIRLGQAIEPYSPLWYEE--------PVPPDNVGAMAQVARAV--RIPVATGERLTTKAEFAPVLREGAA 278 (433)
T ss_dssp CCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHS--SSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred eCCCCCCHHHHHHHHHHhhhcCCCEEEC--------CCChhhHHHHHHHHhcc--CCCEEecCCCCCHHHHHHHHHcCCC
Confidence 542 355554 5566788887731 11223577888888876 79999999999999999999986 8
Q ss_pred CEEEEchHH
Q 018919 283 SGIFIGRPV 291 (349)
Q Consensus 283 ~~V~ig~~~ 291 (349)
|.|++--..
T Consensus 279 D~v~~d~~~ 287 (433)
T 3rcy_A 279 AILQPALGR 287 (433)
T ss_dssp SEECCCHHH
T ss_pred CEEEeCchh
Confidence 999887543
No 309
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=95.57 E-value=0.044 Score=53.29 Aligned_cols=117 Identities=16% Similarity=0.184 Sum_probs=84.4
Q ss_pred CCh-hHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEE
Q 018919 133 KDR-NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPIL 208 (349)
Q Consensus 133 ~~~-~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~ 208 (349)
.++ +.+.+.++++.+.|++++.+++.. +.+. .+.++.+|+.+ +++|.
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-----------------------------~~~~d~e~v~avR~avG~d~~l~ 233 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD-----------------------------AARVDIERVRHVRKVLGDEVDIL 233 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS-----------------------------CHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC-----------------------------CHHHHHHHHHHHHHhcCCCCEEE
Confidence 467 777788888889999999987653 1122 46788999886 57887
Q ss_pred EEEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCC-CcEEEecCCCCHHHHHHHHHhC
Q 018919 209 VKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR-IPVFLDGGVRRGTDVFKALALG 281 (349)
Q Consensus 209 vK~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~-ipvia~GGI~~~~dv~kal~~G 281 (349)
+..- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ + +||++++.+.+..++.++++.|
T Consensus 234 vDan~~~~~~eai~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~~iPIa~dE~~~~~~~~~~~i~~~ 303 (428)
T 3bjs_A 234 TDANTAYTMADARRVLPVLAEIQAGWLEE--------PFACNDFASYREVAKIT--PLVPIAAGENHYTRFEFGQMLDAG 303 (428)
T ss_dssp EECTTCCCHHHHHHHHHHHHHTTCSCEEC--------CSCTTCHHHHHHHTTTC--SSSCEEECTTCCSHHHHHHHHTTC
T ss_pred EECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCccCHHHHHHHHHhC--CCCcEEcCCCcCCHHHHHHHHHhC
Confidence 7642 34544 45567788887631 01223567777776655 6 9999999999999999999987
Q ss_pred -CCEEEEc
Q 018919 282 -ASGIFIG 288 (349)
Q Consensus 282 -A~~V~ig 288 (349)
+|.|++-
T Consensus 304 ~~d~v~ik 311 (428)
T 3bjs_A 304 AVQVWQPD 311 (428)
T ss_dssp CEEEECCB
T ss_pred CCCEEEeC
Confidence 7888874
No 310
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=95.52 E-value=0.077 Score=50.57 Aligned_cols=119 Identities=8% Similarity=0.031 Sum_probs=86.2
Q ss_pred hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEEE
Q 018919 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVKG 211 (349)
Q Consensus 135 ~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK~ 211 (349)
++.+.+.++++.+.|++++-++++++. .+++. .+.++.+|+.+ +.++.+..
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g--------------------------~~~~~d~~~v~avR~a~g~~~~l~vDa 200 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMG--------------------------DDPDTDYAIVKAVREAAGPEMEVQIDL 200 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTT--------------------------SCHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCC--------------------------CCHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 377778888888899999999886531 02223 56789999986 67888864
Q ss_pred e--cC-HHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh-CCC
Q 018919 212 V--LT-AEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL-GAS 283 (349)
Q Consensus 212 v--~~-~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~-GA~ 283 (349)
- -+ .++| +.+.+.|++.|-= ...+..++.+.++++.. ++||++++-+.+..|+.++++. .+|
T Consensus 201 n~~~~d~~~A~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~d 270 (374)
T 3sjn_A 201 ASKWHTCGHSAMMAKRLEEFNLNWIEE--------PVLADSLISYEKLSRQV--SQKIAGGESLTTRYEFQEFITKSNAD 270 (374)
T ss_dssp TTTTCSHHHHHHHHHHSGGGCCSEEEC--------SSCTTCHHHHHHHHHHC--SSEEEECTTCCHHHHHHHHHHHHCCS
T ss_pred CCCCCCHHHHHHHHHHhhhcCceEEEC--------CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcCCCC
Confidence 3 35 6665 4445577777631 01123577788888776 7999999999999999999987 479
Q ss_pred EEEEch
Q 018919 284 GIFIGR 289 (349)
Q Consensus 284 ~V~ig~ 289 (349)
.|++--
T Consensus 271 ~v~~k~ 276 (374)
T 3sjn_A 271 IVQPDI 276 (374)
T ss_dssp EECCBT
T ss_pred EEEeCc
Confidence 998754
No 311
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.51 E-value=1.4 Score=40.24 Aligned_cols=179 Identities=17% Similarity=0.135 Sum_probs=106.8
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------hCC--CceEEEEeecCChhHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------TGP--GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~~~--~~~~~Ql~~~~~~~~~ 138 (349)
|.++.|+.-.+-.+.+.-..+++-.-+.|+.+++ ++ +...+.+|-.+ ... .+.+..... .+....
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV-DSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC-SSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-ccHHHH
Confidence 5556676433323444445777777788886654 33 23456665322 222 345666543 456667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCC-CCcCcccccCCCCCCc-hHHHHHHHHHhc---CCcEEEEEe-
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTL-PPFLTLKNFQGLDLGK-MDEDVKWLQTIT---KLPILVKGV- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~-p~~~~~~~~~~~~~~~-~~~~i~~i~~~~---~~pv~vK~v- 212 (349)
.++++.+++.|++++.+. .|.. .- | +.+ ..+..+.+.+.+ ++||++=.+
T Consensus 88 i~la~~A~~~Gadavlv~--~P~y-----------~~~~------------s~~~l~~~f~~va~a~p~~~lPiilYn~P 142 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLA--PPSY-----------FKNV------------SDDGLFAWFSAVFSKIGKDARDILVYNIP 142 (294)
T ss_dssp HHHHHHHHHTTCSEEEEC--CCCS-----------SCSC------------CHHHHHHHHHHHHHHHCTTCCCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEc--CCcC-----------CCCC------------CHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 889999999999998763 2321 10 0 111 256678888888 899998664
Q ss_pred ------cCHHHHHHHH-HcC--CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCC
Q 018919 213 ------LTAEDARIAV-QAG--AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGAS 283 (349)
Q Consensus 213 ------~~~~~a~~a~-~~G--~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~ 283 (349)
.+++...++. +.. +-+|.-+. .++..+.++.+..+ ++.|+ +| +...++.++.+|++
T Consensus 143 ~~tg~~l~~~~~~~La~~~pn~ivgiKds~----------gd~~~~~~~~~~~~-~f~v~-~G---~d~~~l~~l~~G~~ 207 (294)
T 3b4u_A 143 SVTMVTLSVELVGRLKAAFPGIVTGVKDSS----------GNWSHTERLLKEHG-DLAIL-IG---DERDLARGVRLGGQ 207 (294)
T ss_dssp HHHSCCCCHHHHHHHHHHCTTTEEEEEECC----------CCHHHHHHHHHHHT-TSEEE-EC---CHHHHHHHHHTTCC
T ss_pred chhCcCCCHHHHHHHHHhCCCcEEEEEECC----------CCHHHHHHHHHhCC-CeEEE-Ec---cHHHHHHHHHCCCC
Confidence 4667777776 542 33444321 12444555555554 55554 44 23556788899999
Q ss_pred EEEEchHHH
Q 018919 284 GIFIGRPVV 292 (349)
Q Consensus 284 ~V~ig~~~l 292 (349)
+++-+.+.+
T Consensus 208 G~is~~~n~ 216 (294)
T 3b4u_A 208 GAISGVANF 216 (294)
T ss_dssp EEEESGGGT
T ss_pred EEEeCHHHh
Confidence 999987543
No 312
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=95.50 E-value=0.05 Score=49.29 Aligned_cols=80 Identities=24% Similarity=0.446 Sum_probs=53.4
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHH----------HHHHHHhCCCEE
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGI 285 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d----------v~kal~~GA~~V 285 (349)
+.|+.+.++|+|+++.+. +.+..+++.++. --++.+.||+-..+ ..+++..|||.+
T Consensus 148 ~~A~~a~~~G~dGvV~s~-------------~e~~~ir~~~~~-~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~i 213 (259)
T 3tfx_A 148 SLAKMAKHSGADGVICSP-------------LEVKKLHENIGD-DFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAI 213 (259)
T ss_dssp HHHHHHHHTTCCEEECCG-------------GGHHHHHHHHCS-SSEEEECCCCCC-----------CHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCEEEECH-------------HHHHHHHhhcCC-ccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEE
Confidence 346777889999998742 123445555543 34678999986432 668889999999
Q ss_pred EEchHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018919 286 FIGRPVVYSLAAEGEKGVRRVLEMLREEFE 315 (349)
Q Consensus 286 ~ig~~~l~~~~~~G~~gv~~~l~~l~~el~ 315 (349)
.+||+++.+ +.....++.++++++
T Consensus 214 VvGr~I~~a------~dp~~a~~~i~~~~~ 237 (259)
T 3tfx_A 214 VVGRPITLA------SDPKAAYEAIKKEFN 237 (259)
T ss_dssp EECHHHHTS------SSHHHHHHHHHHHHT
T ss_pred EEChHHhCC------CCHHHHHHHHHHHHH
Confidence 999998742 222345666666654
No 313
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.50 E-value=0.045 Score=50.43 Aligned_cols=92 Identities=22% Similarity=0.353 Sum_probs=59.5
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.-|-.+-.++++ +-.+|||+|++-.|++
T Consensus 29 v~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 108 (292)
T 3daq_A 29 VNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYY 108 (292)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45577899999999765431110 111123455556666667899998777667777665 4448999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+. -.++++.++++.+.+
T Consensus 109 ~~---~~~~~l~~~f~~ia~ 125 (292)
T 3daq_A 109 NK---TNQRGLVKHFEAIAD 125 (292)
T ss_dssp SC---CCHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHH
Confidence 63 235555555555443
No 314
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.49 E-value=0.047 Score=54.18 Aligned_cols=233 Identities=16% Similarity=0.184 Sum_probs=131.8
Q ss_pred hcccccccccccC-CCCCCCcceeEc-CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH-
Q 018919 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA- 118 (349)
Q Consensus 42 ~~~~~~l~p~~l~-~~~~~d~s~~l~-g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~- 118 (349)
+||++.|+|.... ..+++|++|.+- ++.+..|++.|||...+ +..||.+.++.|..++++. +.+.++.+
T Consensus 12 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtVT------e~~ma~a~a~~GGiGvI~~--n~s~e~qa~ 83 (496)
T 4fxs_A 12 TFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQAA 83 (496)
T ss_dssp CGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHHH
T ss_pred CcccEEEecCccccccccccccceeccccccCCCceecCcchhh------HHHHHHHHHHcCCcceecC--CCCHHHHHH
Confidence 6999999998653 345799999986 68899999999997654 6688888888888888853 44554422
Q ss_pred ---hhC--CCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCC-CCCC-chhHHhhhhc-----------------C
Q 018919 119 ---STG--PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT-PRLG-RREADIKNRF-----------------T 174 (349)
Q Consensus 119 ---~~~--~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~-p~~g-~r~~d~~~~~-----------------~ 174 (349)
... .....-....-.......+.++.+.+.+...+.+.=+. -..| ...+|++... .
T Consensus 84 ~V~~Vk~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~~~~~~v~diM~p~~~~vt 163 (496)
T 4fxs_A 84 QVHQVKIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVTDLTKSVAAVMTPKERLAT 163 (496)
T ss_dssp HHHHHHHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCCCTTSBGGGTSEEGGGCCE
T ss_pred HHHhccccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcccCCCcHHHHhcCCCCCEE
Confidence 111 11000011111112334566677777888887653211 0001 1224443110 0
Q ss_pred CCCcCcccccCC-----------CCCC--c----h-HHH-HHHHHH-----hcCCcEEEEE-e----cCHHHHHHHHHcC
Q 018919 175 LPPFLTLKNFQG-----------LDLG--K----M-DED-VKWLQT-----ITKLPILVKG-V----LTAEDARIAVQAG 225 (349)
Q Consensus 175 ~p~~~~~~~~~~-----------~~~~--~----~-~~~-i~~i~~-----~~~~pv~vK~-v----~~~~~a~~a~~~G 225 (349)
++++.+...... ..|. . . .++ ++.... ..+..+.+.. + ...+.++.+.++|
T Consensus 164 v~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a~~l~~aG 243 (496)
T 4fxs_A 164 VKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVEAG 243 (496)
T ss_dssp EECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHHHHHHHTT
T ss_pred ECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHHHHHHhcc
Confidence 001000000000 0000 0 0 111 111110 0111222222 1 2468899999999
Q ss_pred CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 226 AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 226 ~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
+|.|.+...-+ .....++.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 244 ~d~I~id~a~g----~~~~~~~~i~~ir~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 244 VDVLLIDSSHG----HSEGVLQRIRETRAAYP-HLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp CSEEEEECSCT----TSHHHHHHHHHHHHHCT-TCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred CceEEeccccc----cchHHHHHHHHHHHHCC-CceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 99999964322 12345678888887763 688887 77999999999999999999986
No 315
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=95.45 E-value=0.13 Score=48.22 Aligned_cols=89 Identities=12% Similarity=0.071 Sum_probs=61.9
Q ss_pred CCceEEEEeec------CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HH
Q 018919 122 PGIRFFQLYVY------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DE 194 (349)
Q Consensus 122 ~~~~~~Ql~~~------~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~ 194 (349)
..+.++.+... .+.+...++++.+++.|++.|.++-..... . ..| ..+.. ++
T Consensus 209 ~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~--------~--~~~-----------~~~~~~~~ 267 (338)
T 1z41_A 209 DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVH--------A--DIN-----------VFPGYQVS 267 (338)
T ss_dssp CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSC--------C--CCC-----------CCTTTTHH
T ss_pred CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc--------C--CCC-----------CCccchHH
Confidence 34456665431 245567788999999999999876432100 0 001 01223 78
Q ss_pred HHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcC-CCEEEE
Q 018919 195 DVKWLQTITKLPILVKG-VLTAEDARIAVQAG-AAGIIV 231 (349)
Q Consensus 195 ~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G-~d~I~v 231 (349)
.++++++.+++||++-+ +.+++++..+++.| ||.|.+
T Consensus 268 ~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 268 FAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp HHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEee
Confidence 89999999999998765 45899999999999 999988
No 316
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.45 E-value=0.077 Score=49.19 Aligned_cols=92 Identities=14% Similarity=0.230 Sum_probs=58.4
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.=|=.+-.++++ |-.+|||++++-.|++
T Consensus 43 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 122 (304)
T 3cpr_A 43 AAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYY 122 (304)
T ss_dssp HHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 4557789999999976544211111 1123455566666667899987666656666654 3348999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+. -.++++.++++.+.+
T Consensus 123 ~~---~~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 123 SK---PSQEGLLAHFGAIAA 139 (304)
T ss_dssp SC---CCHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHH
Confidence 53 235565555554443
No 317
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.43 E-value=0.33 Score=45.79 Aligned_cols=137 Identities=9% Similarity=0.047 Sum_probs=86.4
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHh--hh--hcCCCCc-Ccc---cccCCCCCCchHHHHHHHHHhcC
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI--KN--RFTLPPF-LTL---KNFQGLDLGKMDEDVKWLQTITK 204 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~--~~--~~~~p~~-~~~---~~~~~~~~~~~~~~i~~i~~~~~ 204 (349)
.+.+...++++.+.++|++++-...=.| +.+ .+ .|+.+.. -.. ....+ ...+.++.+++.++..+
T Consensus 32 gs~e~a~~li~~ak~aGadavKfq~~k~------~tl~s~~~~~fq~~~~~~~~y~~~~~~~-l~~e~~~~L~~~~~~~G 104 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAEVVKHQTHIV------EDEMSDEAKQVIPGNADVSIYEIMERCA-LNEEDEIKLKEYVESKG 104 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEECCH------HHHCCGGGGGCCCTTCSSCHHHHHHHHC-CCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCCEEeeeeccc------ccccCcchhccccCCCCccHHHHHHHhC-CCHHHHHHHHHHHHHhC
Confidence 4677888899999999999986543221 111 00 1221100 000 00000 01111456777788889
Q ss_pred CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH----h
Q 018919 205 LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA----L 280 (349)
Q Consensus 205 ~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~----~ 280 (349)
++++. .+.+.+.+..+.+.|+|.+.|... ....+..|.++.+. +.|||.+-|..|-+++..|.. .
T Consensus 105 i~~~s-t~~d~~svd~l~~~~v~~~KI~S~-------~~~n~~LL~~va~~---gkPviLstGmat~~Ei~~Ave~i~~~ 173 (349)
T 2wqp_A 105 MIFIS-TLFSRAAALRLQRMDIPAYKIGSG-------ECNNYPLIKLVASF---GKPIILSTGMNSIESIKKSVEIIREA 173 (349)
T ss_dssp CEEEE-EECSHHHHHHHHHHTCSCEEECGG-------GTTCHHHHHHHHTT---CSCEEEECTTCCHHHHHHHHHHHHHH
T ss_pred CeEEE-eeCCHHHHHHHHhcCCCEEEECcc-------cccCHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHc
Confidence 99875 578899999999999999999532 12245667666542 789999999999999877664 4
Q ss_pred CCCEEEE
Q 018919 281 GASGIFI 287 (349)
Q Consensus 281 GA~~V~i 287 (349)
|.+.+.+
T Consensus 174 G~~iiLl 180 (349)
T 2wqp_A 174 GVPYALL 180 (349)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 7665554
No 318
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=95.42 E-value=0.044 Score=48.16 Aligned_cols=58 Identities=14% Similarity=0.142 Sum_probs=38.6
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH---H------HHHHHHhCCCEEEE
Q 018919 217 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT---D------VFKALALGASGIFI 287 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~---d------v~kal~~GA~~V~i 287 (349)
.++. .+.|+| ++.+ + +.+.++++.++ .+ +.++||+-.. | ..+ ++.|||.+.+
T Consensus 131 ~a~~-~e~G~d-vV~~----------~---~~~~~ir~~~~--~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVv 191 (213)
T 1vqt_A 131 IEKL-NKLGCD-FVLP----------G---PWAKALREKIK--GK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVL 191 (213)
T ss_dssp HHHH-HHHTCE-EECC----------H---HHHHHHTTTCC--SC-EEECCBC---------CCBCHHH-HTTTCSEEEE
T ss_pred HHHH-hcCCCE-EEEc----------H---HHHHHHHHHCC--CC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEE
Confidence 4666 889999 5432 1 34455555443 35 8889997543 2 567 8899999999
Q ss_pred chHHHH
Q 018919 288 GRPVVY 293 (349)
Q Consensus 288 g~~~l~ 293 (349)
||+++.
T Consensus 192 GR~I~~ 197 (213)
T 1vqt_A 192 GREIYL 197 (213)
T ss_dssp SHHHHT
T ss_pred ChhhcC
Confidence 999985
No 319
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.37 E-value=0.054 Score=49.90 Aligned_cols=92 Identities=15% Similarity=0.323 Sum_probs=58.7
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.-|=.+-.++++ +-.+|||+|++-.|++
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3tak_A 28 VEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYY 107 (291)
T ss_dssp HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 34567899999998665442110 111123455556666667899998766666677664 4458999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+. -.++++.++++.+.+
T Consensus 108 ~~---~~~~~l~~~f~~ia~ 124 (291)
T 3tak_A 108 NK---PTQEGLYQHYKAIAE 124 (291)
T ss_dssp SC---CCHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHH
Confidence 63 235555555554443
No 320
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.37 E-value=1.7 Score=40.12 Aligned_cols=181 Identities=17% Similarity=0.118 Sum_probs=103.5
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
.|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ + +....+.+|-.+ . .. -+.+...-. .+-..
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSH-YSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCC-chHHH
Confidence 46667777533333444455677777788876543 2 334456665322 1 22 345666533 45667
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
+.++++.+++.|++++.+. .|..... .-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 92 ai~la~~A~~~Gadavlv~--~Pyy~~~--------~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~tg 149 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAM--PPYHGAT--------FRV------------PEAQIFEFYARVSDAIAIPIMVQDAPASG 149 (309)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CSCBTTT--------BCC------------CHHHHHHHHHHHHHHCSSCEEEEECGGGC
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCCccC--------CCC------------CHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Confidence 7889999999999998763 2321000 001 111 256678888888999998765
Q ss_pred --cCHHHHHHHHH-c-CCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHH---HHHHHHhCCCEE
Q 018919 213 --LTAEDARIAVQ-A-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD---VFKALALGASGI 285 (349)
Q Consensus 213 --~~~~~a~~a~~-~-G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d---v~kal~~GA~~V 285 (349)
.+++...++.+ . .+-+|.... ...+..+.++.+..++.+..+.+| .| ++.++++||+++
T Consensus 150 ~~l~~~~~~~La~~~pnIvgiK~~~---------~~~~~~~~~~~~~~~~~~~~~~~G-----~d~~~l~~~l~~G~~G~ 215 (309)
T 3fkr_A 150 TALSAPFLARMAREIEQVAYFXIET---------PGAANKLRELIRLGGDAIEGPWDG-----EEAITLLADLHAGATGA 215 (309)
T ss_dssp CCCCHHHHHHHHHHSTTEEEEEECS---------SSHHHHHHHHHHHHGGGCCEEEEC-----GGGTTHHHHHHTTCCEE
T ss_pred CCCCHHHHHHHHhhCCCEEEEECCC---------cchHHHHHHHHHhcCCceeeecCC-----chHHHHHHHHHCCCcEE
Confidence 45777777764 2 344443211 113444555555543333223343 34 457899999998
Q ss_pred EEch
Q 018919 286 FIGR 289 (349)
Q Consensus 286 ~ig~ 289 (349)
+.|.
T Consensus 216 i~~n 219 (309)
T 3fkr_A 216 MTGG 219 (309)
T ss_dssp CCCS
T ss_pred EEhh
Confidence 7654
No 321
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=95.30 E-value=0.18 Score=47.55 Aligned_cols=120 Identities=17% Similarity=0.106 Sum_probs=86.4
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++.+-+.+++. ++. .+.++.+|+.+ ++++.+
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~~-----------------------------~~~d~~~v~avR~~~g~~~~l~v 189 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCGD-----------------------------EEQDFERLRRLHETLAGRAVVRV 189 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSC-----------------------------HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCC-----------------------------HHHHHHHHHHHHHHhCCCCEEEE
Confidence 4677777888888889999998877531 112 46788999887 578887
Q ss_pred EEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC--
Q 018919 210 KGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-- 281 (349)
Q Consensus 210 K~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-- 281 (349)
..- -+.++ ++.+.+.|++.|- | ...+..++.+.++++.. ++||+++.-+.+..|+.+++..|
T Consensus 190 Dan~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~~~~ 259 (356)
T 3ro6_B 190 DPNQSYDRDGLLRLDRLVQELGIEFIE-------Q-PFPAGRTDWLRALPKAI--RRRIAADESLLGPADAFALAAPPAA 259 (356)
T ss_dssp ECTTCCCHHHHHHHHHHHHHTTCCCEE-------C-CSCTTCHHHHHTSCHHH--HHTEEESTTCCSHHHHHHHHSSSCS
T ss_pred eCCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCCCCcHHHHHHHHhcC--CCCEEeCCcCCCHHHHHHHHhcCCc
Confidence 642 24444 4556778888773 1 11123566677766665 69999999999999999999875
Q ss_pred CCEEEEchHH
Q 018919 282 ASGIFIGRPV 291 (349)
Q Consensus 282 A~~V~ig~~~ 291 (349)
+|.|++--..
T Consensus 260 ~d~v~~k~~~ 269 (356)
T 3ro6_B 260 CGIFNIKLMK 269 (356)
T ss_dssp CSEEEECHHH
T ss_pred CCEEEEcccc
Confidence 8999997644
No 322
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.29 E-value=0.07 Score=49.28 Aligned_cols=92 Identities=18% Similarity=0.286 Sum_probs=58.1
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.-|=.+-.++++ +-.+|||+|++-.|++
T Consensus 34 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 113 (297)
T 3flu_A 34 IDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYY 113 (297)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 3456789999999976544211111 1123455566666667899998766556666654 3348999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+. -.++++.++++.+.+
T Consensus 114 ~~---~~~~~l~~~f~~va~ 130 (297)
T 3flu_A 114 NK---PSQEGIYQHFKTIAE 130 (297)
T ss_dssp SC---CCHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHH
Confidence 63 234555555444433
No 323
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=95.29 E-value=0.18 Score=47.79 Aligned_cols=121 Identities=16% Similarity=0.164 Sum_probs=85.6
Q ss_pred CChhHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-h-HHHHHHHHHhc--CCcE
Q 018919 133 KDRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-M-DEDVKWLQTIT--KLPI 207 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~-G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~-~~~i~~i~~~~--~~pv 207 (349)
.+++.+.+.++++.+. |+..+-+.++.. +. . .+.++.+|+.+ +.++
T Consensus 138 ~~~~~~~~~a~~~~~~~G~~~~K~K~g~~-----------------------------~~~~d~~~v~avR~a~g~~~~l 188 (367)
T 3dg3_A 138 DDPVKMVAEAERIRETYGINTFKVKVGRR-----------------------------PVQLDTAVVRALRERFGDAIEL 188 (367)
T ss_dssp SCHHHHHHHHHHHHHHHCCCEEEEECCCS-----------------------------STHHHHHHHHHHHHHHGGGSEE
T ss_pred CCHHHHHHHHHHHHHhcCccEEEEeeCCC-----------------------------hhhhHHHHHHHHHHHhCCCCEE
Confidence 4677777778887777 999998877531 11 2 56788898886 5778
Q ss_pred EEEEe--cCHHHHH----HHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC
Q 018919 208 LVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 281 (349)
Q Consensus 208 ~vK~v--~~~~~a~----~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G 281 (349)
.+..- -+.++|. .+.+.|++.|- + ...+..++.+.++++.. ++||++++.+.+..|+.+++..|
T Consensus 189 ~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 258 (367)
T 3dg3_A 189 YVDGNRGWSAAESLRAMREMADLDLLFAE-------E-LCPADDVLSRRRLVGQL--DMPFIADESVPTPADVTREVLGG 258 (367)
T ss_dssp EEECTTCSCHHHHHHHHHHTTTSCCSCEE-------S-CSCTTSHHHHHHHHHHC--SSCEEECTTCSSHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHHHhCCCEEE-------C-CCCcccHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHHHcC
Confidence 77532 3455553 44456766653 1 01123567777887776 79999999999999999999987
Q ss_pred -CCEEEEchHHH
Q 018919 282 -ASGIFIGRPVV 292 (349)
Q Consensus 282 -A~~V~ig~~~l 292 (349)
+|.|++--..+
T Consensus 259 ~~d~v~~k~~~~ 270 (367)
T 3dg3_A 259 SATAISIKTART 270 (367)
T ss_dssp SCSEEEECHHHH
T ss_pred CCCEEEeehhhh
Confidence 79999965544
No 324
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.28 E-value=0.44 Score=44.94 Aligned_cols=241 Identities=15% Similarity=0.145 Sum_probs=124.7
Q ss_pred eeEcCeec---CcceeecccccccccCChhhHHHHHHHHHcCCeEE-ecCCCCCCHHHHH-h-h--CC--Cc--eEEEEe
Q 018919 63 TTVLGFKI---SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSSWSTSSVEEVA-S-T--GP--GI--RFFQLY 130 (349)
Q Consensus 63 ~~l~g~~~---~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~-~~~~~~~~~e~i~-~-~--~~--~~--~~~Ql~ 130 (349)
+++.|.++ ..|++||.++.....+.+--..++++|+++|+-.+ +.++ ..+.+. . . .. +. ..+.+|
T Consensus 7 i~i~~~~iG~~~~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~---k~~tl~s~~~~~fq~~~~~~~~y~~~ 83 (349)
T 2wqp_A 7 FKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTH---IVEDEMSDEAKQVIPGNADVSIYEIM 83 (349)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEEC---CHHHHCCGGGGGCCCTTCSSCHHHHH
T ss_pred EEECCEEECCCCceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeec---ccccccCcchhccccCCCCccHHHHH
Confidence 34445444 24899998875332233344589999999999866 3333 233321 1 1 11 00 000111
Q ss_pred e--cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCC-cCcccccCCCCCCchHHHHHHHHHhcCCcE
Q 018919 131 V--YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEDVKWLQTITKLPI 207 (349)
Q Consensus 131 ~--~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv 207 (349)
. .-..+....+.+.+++.|...+.=-+| .+.-|+-..+.+|- ++..++. . .+..|+++.+ ++.||
T Consensus 84 ~~~~l~~e~~~~L~~~~~~~Gi~~~st~~d-----~~svd~l~~~~v~~~KI~S~~~---~---n~~LL~~va~-~gkPv 151 (349)
T 2wqp_A 84 ERCALNEEDEIKLKEYVESKGMIFISTLFS-----RAAALRLQRMDIPAYKIGSGEC---N---NYPLIKLVAS-FGKPI 151 (349)
T ss_dssp HHHCCCHHHHHHHHHHHHHTTCEEEEEECS-----HHHHHHHHHHTCSCEEECGGGT---T---CHHHHHHHHT-TCSCE
T ss_pred HHhCCCHHHHHHHHHHHHHhCCeEEEeeCC-----HHHHHHHHhcCCCEEEECcccc---c---CHHHHHHHHh-cCCeE
Confidence 1 123455666777777888877642222 12222222332221 1111221 1 1567887765 69999
Q ss_pred EEEEe-cCHHHHHH----HHHcCCCEEEEecCCCCCCCC--chhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh
Q 018919 208 LVKGV-LTAEDARI----AVQAGAAGIIVSNHGARQLDY--VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 280 (349)
Q Consensus 208 ~vK~v-~~~~~a~~----a~~~G~d~I~v~~~gg~~~~~--~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~ 280 (349)
++|.- .+.++... +.+.|.+.+.+ |+-+.... ..-.+..++.+++..+ ++||..++==.-..=.+.|+++
T Consensus 152 iLstGmat~~Ei~~Ave~i~~~G~~iiLl--hc~s~Yp~~~~~~nL~ai~~lk~~f~-~lpVg~sdHt~G~~~~~AAvAl 228 (349)
T 2wqp_A 152 ILSTGMNSIESIKKSVEIIREAGVPYALL--HCTNIYPTPYEDVRLGGMNDLSEAFP-DAIIGLSDHTLDNYACLGAVAL 228 (349)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHTCCEEEE--ECCCCSSCCGGGCCTHHHHHHHHHCT-TSEEEEECCSSSSHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHcCCCEEEE--eccCCCCCChhhcCHHHHHHHHHHCC-CCCEEeCCCCCcHHHHHHHHHh
Confidence 99975 46665433 44578876666 33222111 1124567777766642 4888654422223444568889
Q ss_pred CCCEEEEchHHHHHHhhcCHHHH----HHHHHHHHHHHHHHHHHcCC
Q 018919 281 GASGIFIGRPVVYSLAAEGEKGV----RRVLEMLREEFELAMALSGC 323 (349)
Q Consensus 281 GA~~V~ig~~~l~~~~~~G~~gv----~~~l~~l~~el~~~m~~~G~ 323 (349)
||+ +|=+-|--.-+..|.++- -+-+..+.++++..-..+|.
T Consensus 229 GA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~ 273 (349)
T 2wqp_A 229 GGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGG 273 (349)
T ss_dssp TCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCC
Confidence 999 455433211111232210 12356777777777777885
No 325
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=95.28 E-value=0.3 Score=43.29 Aligned_cols=111 Identities=17% Similarity=0.248 Sum_probs=72.2
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEec------
Q 018919 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVL------ 213 (349)
Q Consensus 140 ~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~------ 213 (349)
+.++.+++.+.+.+.+|-+-+ .+.++++++.+++|++ |-+.
T Consensus 83 ei~~~i~~~~ld~vQLHG~E~--------------------------------~~~~~~l~~~~~~~vi-Ka~~v~~~~~ 129 (228)
T 4aaj_A 83 EWAMAIERTGAQYIQVHSNAL--------------------------------PQTIDTLKKEFGVFVM-KAFRVPTISK 129 (228)
T ss_dssp HHHHHHHHHTCSEEEECSCCC--------------------------------HHHHHHHHHHHCCEEE-EEEECCSSCS
T ss_pred HHHHHHHhccchheecccccC--------------------------------HHHHHHHhhccCceEE-EEEEeccccc
Confidence 345566778999998875421 2568888888888876 5431
Q ss_pred CH-HHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-hCCCEEEE
Q 018919 214 TA-EDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFI 287 (349)
Q Consensus 214 ~~-~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~-~GA~~V~i 287 (349)
.+ +++ ..+....+|++.+...||+.. .-.|+.+..+.. +.|++..||+ +++.|.+|+. .+..+|=+
T Consensus 130 ~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~---~fDW~~~~~~~~----~~p~iLAGGL-~peNV~~Ai~~~~P~gVDV 201 (228)
T 4aaj_A 130 NPEEDANRLLSEISRYNADMVLLDTGAGSGK---LHDLRVSSLVAR----KIPVIVAGGL-NAENVEEVIKVVKPYGVDV 201 (228)
T ss_dssp CHHHHHHHHHHHHHHSCCSEEEEEC----------CCCHHHHHHHH----HSCEEEESSC-CTTTHHHHHHHHCCSEEEE
T ss_pred chhhhHHHHHHHHhccCCCEEccCCCCCCcC---cCChHHHHHhhh----cCCeEEECCC-CHHHHHHHHHHhCCCEEEe
Confidence 11 332 334556899999987776421 113444544433 4799999999 5699999998 79999999
Q ss_pred chHH
Q 018919 288 GRPV 291 (349)
Q Consensus 288 g~~~ 291 (349)
.+-+
T Consensus 202 sSGV 205 (228)
T 4aaj_A 202 SSGV 205 (228)
T ss_dssp SGGG
T ss_pred CCCC
Confidence 8854
No 326
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=95.27 E-value=0.65 Score=43.77 Aligned_cols=270 Identities=18% Similarity=0.184 Sum_probs=135.6
Q ss_pred ccccCCCcchHHH-HHHHhhccccccccccc-------CCCCCCCcceeEcCeec--CcceeecccccccccCChhhHHH
Q 018919 24 DYYASGAEDQWTL-QENRNAFSRILFRPRIL-------IDVSKIDMNTTVLGFKI--SMPIMIAPTAMQKMAHPEGEYAT 93 (349)
Q Consensus 24 ~y~~~g~~~~~t~-~~n~~~~~~~~l~p~~l-------~~~~~~d~s~~l~g~~~--~~Pi~iApm~~~~l~~~~~~~~l 93 (349)
..+.|--||+..+ ....+++.-+.=+-++. +....-++.+++.+..+ ..|++||-.+. ..+.+.-..+
T Consensus 48 ~~~ig~~g~~~~~~~~~~~~~~~v~~~~~i~~~~k~~sr~~~~~~~~i~i~~~~iG~~~~~vIAgpcs--~es~e~a~~~ 125 (350)
T 1vr6_A 48 RTVIGIIGDDRYVVADKFESLDCVESVVRVLKPYKLVSREFHPEDTVIDLGDVKIGNGYFTIIAGPCS--VEGREMLMET 125 (350)
T ss_dssp CEEEEEEEEESSCCHHHHHTSTTEEEEEECSCSCCTTBTTTCCSCCCEECSSCEESTTEEEEEEECSB--CCCHHHHHHH
T ss_pred eEEEEEECCcCcCCHHHhhCCccceeeccCCCChhhhhhhcCCcCCEEEECCEEECCCCeEEEEeCCC--cCCHHHHHHH
Confidence 4445555665554 23344444333222222 22334456666655444 24777776543 2244444579
Q ss_pred HHHHHHcCCeEEe-cCCCCCCHHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhh
Q 018919 94 ARAASAAGTIMTL-SSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNR 172 (349)
Q Consensus 94 a~aa~~~G~~~~~-~~~~~~~~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~ 172 (349)
+++++++|.-++- ..+.+.+ .| ..||-. ..+....+.+.+++.|...+.==.|. ..-++-..
T Consensus 126 a~~~k~aGa~~vr~q~fKprT-------s~--~~f~gl---g~egl~~l~~~~~e~Gl~~~te~~d~-----~~~~~l~~ 188 (350)
T 1vr6_A 126 AHFLSELGVKVLRGGAYKPRT-------SP--YSFQGL---GEKGLEYLREAADKYGMYVVTEALGE-----DDLPKVAE 188 (350)
T ss_dssp HHHHHHTTCCEEECBSCCCCC-------ST--TSCCCC---THHHHHHHHHHHHHHTCEEEEECSSG-----GGHHHHHH
T ss_pred HHHHHHcCCCeeeeeEEeCCC-------Ch--HhhcCC---CHHHHHHHHHHHHHcCCcEEEEeCCH-----HHHHHHHH
Confidence 9999999988753 2222211 11 112211 23344444455566787765311221 11111111
Q ss_pred cCCCC-cCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEec--CHHHHHH----HHHcCCCEEEEecCCCCCCC---Cc
Q 018919 173 FTLPP-FLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVL--TAEDARI----AVQAGAAGIIVSNHGARQLD---YV 242 (349)
Q Consensus 173 ~~~p~-~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~--~~~~a~~----a~~~G~d~I~v~~~gg~~~~---~~ 242 (349)
+ ++- .+..++ +.+ ...++++. .++.||++|.-. +.++... +...|.+-+++--+|.+... ..
T Consensus 189 ~-vd~lkIgAr~---~~n---~~LL~~va-~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~ 260 (350)
T 1vr6_A 189 Y-ADIIQIGARN---AQN---FRLLSKAG-SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRN 260 (350)
T ss_dssp H-CSEEEECGGG---TTC---HHHHHHHH-TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSS
T ss_pred h-CCEEEECccc---ccC---HHHHHHHH-ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChh
Confidence 1 110 011111 111 45577776 479999999864 5666443 45578877777545654321 11
Q ss_pred hhhHHHHHHHHHHhcCCCcEEEec----CCCC--HHHHHHHHHhCCCEEEEchHHHHHHh-hcCHHHH-HHHHHHHHHHH
Q 018919 243 PATIMALEEVVKATQGRIPVFLDG----GVRR--GTDVFKALALGASGIFIGRPVVYSLA-AEGEKGV-RRVLEMLREEF 314 (349)
Q Consensus 243 ~~~~~~l~~i~~~~~~~ipvia~G----GI~~--~~dv~kal~~GA~~V~ig~~~l~~~~-~~G~~gv-~~~l~~l~~el 314 (349)
...+..++.+++.. .+||+++. |-+. ..=...++++||++++|-+-+--.-+ +.|...+ -+-++.+.+++
T Consensus 261 ~vdl~ai~~lk~~~--~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~i 338 (350)
T 1vr6_A 261 TLDISAVPIIRKES--HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEM 338 (350)
T ss_dssp BCCTTHHHHHHHHB--SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhh--CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHH
Confidence 22455666666655 68998744 3322 23355678899999999985532111 1222110 12245566666
Q ss_pred HHHHHHcC
Q 018919 315 ELAMALSG 322 (349)
Q Consensus 315 ~~~m~~~G 322 (349)
+..-..+|
T Consensus 339 r~i~~alg 346 (350)
T 1vr6_A 339 KKLADALG 346 (350)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 66555555
No 327
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.27 E-value=0.069 Score=49.44 Aligned_cols=90 Identities=14% Similarity=0.307 Sum_probs=56.2
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.=|=.+-.++++ |-++|||+|++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 118 (301)
T 1xky_A 39 VNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYY 118 (301)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 4556789999999966544211001 1123455556666667899987666556566654 3348999999999987
Q ss_pred HHHhhcCHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEML 310 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l 310 (349)
+. -.++++.++++.+
T Consensus 119 ~~---~s~~~l~~~f~~v 133 (301)
T 1xky_A 119 NK---PSQEGMYQHFKAI 133 (301)
T ss_dssp SC---CCHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHH
Confidence 53 2345555444443
No 328
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.25 E-value=0.07 Score=49.17 Aligned_cols=92 Identities=11% Similarity=0.133 Sum_probs=58.5
Q ss_pred HHHHHH-cCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHH
Q 018919 218 ARIAVQ-AGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPV 291 (349)
Q Consensus 218 a~~a~~-~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~ 291 (349)
++.+++ .|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.-|=.+-.++++ +-.+|||+|++-.|+
T Consensus 30 v~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPF 109 (293)
T ss_dssp HHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 445678 9999999966543211111 1123455666666667899987766666666654 334799999999998
Q ss_pred HHHHhhcCHHHHHHHHHHHHH
Q 018919 292 VYSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 292 l~~~~~~G~~gv~~~l~~l~~ 312 (349)
++. ..++++.++++.+.+
T Consensus 110 y~~---~~~~~l~~~f~~va~ 127 (293)
T 1f6k_A 110 YYK---FSFPEIKHYYDTIIA 127 (293)
T ss_dssp SSC---CCHHHHHHHHHHHHH
T ss_pred CCC---CCHHHHHHHHHHHHH
Confidence 763 235565555555444
No 329
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=95.23 E-value=0.18 Score=47.72 Aligned_cols=114 Identities=18% Similarity=0.197 Sum_probs=80.7
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK 210 (349)
+++.+.+.++++.+.|++++.++++ | +. .+.++.+|+.+ ++++.+.
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~~-~------------------------------~~~~e~v~avr~~~g~~~~l~vD 189 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKIE-P------------------------------GWDVEPVRAVRERFGDDVLLQVD 189 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECB-T------------------------------TBSHHHHHHHHHHHCTTSEEEEE
T ss_pred CHHHHHHHHHHHHHhCccEEEEecC-c------------------------------hhHHHHHHHHHHhcCCCceEEEe
Confidence 6677777888888899999998763 1 11 47788888887 4677664
Q ss_pred Ee--cC---HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCE
Q 018919 211 GV--LT---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASG 284 (349)
Q Consensus 211 ~v--~~---~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~ 284 (349)
.- -+ .+.++.+.+.|++.|- + ...+..++.+.++++.+ ++||++++.+.+..++.++++.| +|.
T Consensus 190 an~~~~~~~~~~~~~l~~~~i~~iE-------~-P~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~ 259 (368)
T 1sjd_A 190 ANTAYTLGDAPQLARLDPFGLLLIE-------Q-PLEEEDVLGHAELARRI--QTPICLDESIVSARAAADAIKLGAVQI 259 (368)
T ss_dssp CTTCCCGGGHHHHHTTGGGCCSEEE-------C-CSCTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHTTCCSE
T ss_pred ccCCCCHHHHHHHHHHHhcCCCeEe-------C-CCChhhHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHcCCCCE
Confidence 31 12 3334445567877653 1 01123567777777665 79999999999999999999987 799
Q ss_pred EEEc
Q 018919 285 IFIG 288 (349)
Q Consensus 285 V~ig 288 (349)
|++-
T Consensus 260 v~ik 263 (368)
T 1sjd_A 260 VNIK 263 (368)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9983
No 330
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=95.23 E-value=0.054 Score=48.52 Aligned_cols=80 Identities=25% Similarity=0.391 Sum_probs=50.5
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHH----------HHHHHHhCCCEE
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGI 285 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d----------v~kal~~GA~~V 285 (349)
+.|+.+.++|+|+++.+.+ ....+++.++.+. ++.+.||+-..+ ..+++..|||.+
T Consensus 148 ~~A~~a~~~g~~GvV~s~~-------------e~~~ir~~~~~~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~l 213 (239)
T 3tr2_A 148 RMATLAKSAGLDGVVCSAQ-------------EAALLRKQFDRNF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYL 213 (239)
T ss_dssp HHHHHHHHHTCCEEECCHH-------------HHHHHHTTCCTTS-EEEECCBC----------CCBCHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEECch-------------hHHHHHHhcCCCc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEE
Confidence 4467778899999987521 1234445454334 778899985432 557888999999
Q ss_pred EEchHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018919 286 FIGRPVVYSLAAEGEKGVRRVLEMLREEFE 315 (349)
Q Consensus 286 ~ig~~~l~~~~~~G~~gv~~~l~~l~~el~ 315 (349)
.+||+++.+ +.....++.+++++.
T Consensus 214 VvGr~I~~a------~dp~~a~~~i~~~i~ 237 (239)
T 3tr2_A 214 VIGRPITQS------TDPLKALEAIDKDIK 237 (239)
T ss_dssp EECHHHHTS------SSHHHHHHHHHHHC-
T ss_pred EEChHHhCC------CCHHHHHHHHHHHHh
Confidence 999998742 222345566666553
No 331
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.23 E-value=0.079 Score=49.06 Aligned_cols=93 Identities=15% Similarity=0.187 Sum_probs=59.5
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.=|=.+-.++++ +-++|||++++-.|++
T Consensus 38 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 117 (303)
T 2wkj_A 38 VQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFY 117 (303)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCC
Confidence 4456789999999966544211111 1123455556666667899987666555566654 3348999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLREE 313 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~e 313 (349)
+. ..++++.++++.+.+.
T Consensus 118 ~~---~s~~~l~~~f~~va~a 135 (303)
T 2wkj_A 118 YP---FSFEEHCDHYRAIIDS 135 (303)
T ss_dssp SC---CCHHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHHh
Confidence 63 2456666666666554
No 332
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.23 E-value=1.8 Score=39.57 Aligned_cols=179 Identities=13% Similarity=0.054 Sum_probs=104.4
Q ss_pred ceeecccccccccCChhhHHHHHHHHH-cCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASA-AGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~-~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
|.++.|+.-.+-.+.++-..+++-.-+ .|+.+++ + ++...+.+|-.+ . .. -+.+...-. .+-..
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ 87 (293)
T 1f6k_A 9 SALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS-VNLKE 87 (293)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SCHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC-CCHHH
Confidence 556667643332344444567777777 8876654 3 234456665322 1 22 344555432 45566
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
..++++.+++.|++++.+.. |. |.-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 88 ai~la~~a~~~Gadavlv~~--P~-----------y~~~------------~~~~l~~~f~~va~a~~lPiilYn~P~~t 142 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVT--PF-----------YYKF------------SFPEIKHYYDTIIAETGSNMIVYSIPFLT 142 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEEC--CC-----------SSCC------------CHHHHHHHHHHHHHHHCCCEEEEECHHHH
T ss_pred HHHHHHHHHhcCCCEEEECC--CC-----------CCCC------------CHHHHHHHHHHHHHhCCCCEEEEECcccc
Confidence 77889999999999987642 32 1101 111 256677888888999998664
Q ss_pred ---cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 213 ---LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 213 ---~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+++...++.+.. +-+|.-+. .++..+.++.+.. +++.|+ +|. ..-++.++.+|++++.-+
T Consensus 143 g~~l~~~~~~~La~~pnIvgiK~s~----------gd~~~~~~~~~~~-~~f~v~-~G~---d~~~~~~l~~G~~G~is~ 207 (293)
T 1f6k_A 143 GVNMGIEQFGELYKNPKVLGVKFTA----------GDFYLLERLKKAY-PNHLIW-AGF---DEMMLPAASLGVDGAIGS 207 (293)
T ss_dssp CCCCCHHHHHHHHTSTTEEEEEECS----------CCHHHHHHHHHHC-TTSEEE-ECC---GGGHHHHHHTTCSEEEES
T ss_pred CcCCCHHHHHHHhcCCCEEEEEECC----------CCHHHHHHHHHhC-CCeEEE-ECc---HHHHHHHHHCCCcEEEeC
Confidence 4677777776532 22333321 1234444555442 355555 332 234778899999999999
Q ss_pred hHHH
Q 018919 289 RPVV 292 (349)
Q Consensus 289 ~~~l 292 (349)
.+-+
T Consensus 208 ~~n~ 211 (293)
T 1f6k_A 208 TFNV 211 (293)
T ss_dssp THHH
T ss_pred HHHh
Confidence 8654
No 333
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=95.22 E-value=1.4 Score=41.93 Aligned_cols=234 Identities=11% Similarity=0.093 Sum_probs=117.1
Q ss_pred eeEcCeec---CcceeecccccccccCChhhHHHHHHHHHcCCeEE-ecCCCCCCHHHHHhhCCCceEEE----------
Q 018919 63 TTVLGFKI---SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSSWSTSSVEEVASTGPGIRFFQ---------- 128 (349)
Q Consensus 63 ~~l~g~~~---~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~-~~~~~~~~~e~i~~~~~~~~~~Q---------- 128 (349)
.+|.+..+ ..|++||=+|.....+-+.-..++++|+++|+-.+ +.++. .+.+. .|...-||
T Consensus 16 ~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k---~~tl~--s~~~~~fq~~~~~~~~~y 90 (385)
T 1vli_A 16 FQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQ---ADRMY--QKDPGLYKTAAGKDVSIF 90 (385)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBC---GGGGT--SCCC---------CCCHH
T ss_pred eeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeec---cCccc--CcchhhhccCCCCCccHH
Confidence 34555555 35899998765432233334578999999999866 33332 22210 01000022
Q ss_pred -Eee--cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCC-cCcccccCCCCCCchHHHHHHHHHhcC
Q 018919 129 -LYV--YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEDVKWLQTITK 204 (349)
Q Consensus 129 -l~~--~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~i~~i~~~~~ 204 (349)
+|. .-..+....+.+.+++.|...+ .+|.. .+.-|+-..+.+|- ++..++ -..+..|+++.+ ++
T Consensus 91 e~~~~~~l~~e~~~~L~~~~~~~Gi~~~----stpfD-~~svd~l~~~~vd~~KIgS~~------~~N~pLL~~va~-~g 158 (385)
T 1vli_A 91 SLVQSMEMPAEWILPLLDYCREKQVIFL----STVCD-EGSADLLQSTSPSAFKIASYE------INHLPLLKYVAR-LN 158 (385)
T ss_dssp HHGGGBSSCGGGHHHHHHHHHHTTCEEE----CBCCS-HHHHHHHHTTCCSCEEECGGG------TTCHHHHHHHHT-TC
T ss_pred HHHHhcCCCHHHHHHHHHHHHHcCCcEE----EccCC-HHHHHHHHhcCCCEEEECccc------ccCHHHHHHHHh-cC
Confidence 111 1245666777778888887764 23321 22223322332221 111111 111567887765 69
Q ss_pred CcEEEEEe-cCHHHHHH----HHHcCC-CEEEEecCCCCCCCC--chhhHHHHHHHHHHhcCCCcEEEecCCCC-HHHHH
Q 018919 205 LPILVKGV-LTAEDARI----AVQAGA-AGIIVSNHGARQLDY--VPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVF 275 (349)
Q Consensus 205 ~pv~vK~v-~~~~~a~~----a~~~G~-d~I~v~~~gg~~~~~--~~~~~~~l~~i~~~~~~~ipvia~GGI~~-~~dv~ 275 (349)
.||++|.- .+.++... +.+.|. +.+.+ |+-+.... ....+..++.+++..+ ++||..++=-.- ..=.+
T Consensus 159 KPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLl--hc~s~YPtp~~~~nL~aI~~Lk~~f~-~lpVG~SdHt~G~~~~~~ 235 (385)
T 1vli_A 159 RPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIM--HCVAKYPAPPEYSNLSVIPMLAAAFP-EAVIGFSDHSEHPTEAPC 235 (385)
T ss_dssp SCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEE--EECSSSSCCGGGCCTTHHHHHHHHST-TSEEEEEECCSSSSHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEE--eccCCCCCChhhcCHHHHHHHHHHcC-CCCEEeCCCCCCchHHHH
Confidence 99999975 46666444 445787 44444 32221111 1123556666666542 478865442222 34455
Q ss_pred HHHHhCCCEEEEchHHHHHHhhcCHHH---H-HHHHHHHHHHHHHHH
Q 018919 276 KALALGASGIFIGRPVVYSLAAEGEKG---V-RRVLEMLREEFELAM 318 (349)
Q Consensus 276 kal~~GA~~V~ig~~~l~~~~~~G~~g---v-~~~l~~l~~el~~~m 318 (349)
.|+++||+ +|=+-|--.-+..|.++ + -+-+..+.++++..-
T Consensus 236 AAvAlGA~--iIEkHftldra~~G~D~~~SL~P~ef~~lv~~ir~i~ 280 (385)
T 1vli_A 236 AAVRLGAK--LIEKHFTIDKNLPGADHSFALNPDELKEMVDGIRKTE 280 (385)
T ss_dssp HHHHTTCS--EEEEEBCSCTTSSCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCC--EEEeCCCccccCCCCchhhhCCHHHHHHHHHHHHHHH
Confidence 68889999 44443321111123211 0 123556666666666
No 334
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=95.22 E-value=0.055 Score=48.94 Aligned_cols=79 Identities=22% Similarity=0.331 Sum_probs=53.4
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH-H---------HHHHHHhCCCEE
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT-D---------VFKALALGASGI 285 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~-d---------v~kal~~GA~~V 285 (349)
+.|+.+.++|+|+++++. ..+..+++.++.+. ++.+.||+-.. + ..++++.|||.+
T Consensus 166 ~~A~~a~~aG~~GvV~sa-------------~e~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~i 231 (255)
T 3ldv_A 166 RLATLTKNAGLDGVVCSA-------------QEASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYL 231 (255)
T ss_dssp HHHHHHHHTTCSEEECCH-------------HHHHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEECH-------------HHHHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEE
Confidence 446677889999998742 23556666665444 67888898532 2 567888999999
Q ss_pred EEchHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018919 286 FIGRPVVYSLAAEGEKGVRRVLEMLREEF 314 (349)
Q Consensus 286 ~ig~~~l~~~~~~G~~gv~~~l~~l~~el 314 (349)
.+||+++.+ +.....++.+++|+
T Consensus 232 VvGr~I~~a------~dp~~a~~~i~~ei 254 (255)
T 3ldv_A 232 VIGRPITQA------AHPEVVLEEINSSL 254 (255)
T ss_dssp EECHHHHTC------SCHHHHHHHHHHHC
T ss_pred EECHHHhCC------CCHHHHHHHHHHhh
Confidence 999998742 22234556666654
No 335
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=95.22 E-value=0.029 Score=51.28 Aligned_cols=39 Identities=31% Similarity=0.341 Sum_probs=33.5
Q ss_pred HHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEec
Q 018919 193 DEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
.+.++++|+.+++||++.+ +.++++++.+ .|||+++|.+
T Consensus 191 ~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 191 KDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp HHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred HHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 5779999998899999887 4679999997 9999999953
No 336
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.21 E-value=0.13 Score=49.06 Aligned_cols=99 Identities=17% Similarity=0.189 Sum_probs=64.6
Q ss_pred CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCC----Cch-HHHHH
Q 018919 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL----GKM-DEDVK 197 (349)
Q Consensus 123 ~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~----~~~-~~~i~ 197 (349)
.|.++.+-...+.+.+.+.++.++++|+++|.++=.+.. |.. ...|. ..+..+-.+ ... ++.++
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~---r~~-----~~~~~---~~~~~gGlSG~~i~p~a~~~v~ 289 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVS---RPA-----GLQGA---LRSETGGLSGKPLRDLSTQTIR 289 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSC---CCT-----TCCCT---TTTSSSEEEEGGGHHHHHHHHH
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcc---ccc-----ccccc---cccccCCcCCcccchhHHHHHH
Confidence 467788765555567788999999999999987522110 100 00010 000000011 112 67899
Q ss_pred HHHHhc--CCcEEE-EEecCHHHHHHHHHcCCCEEEEe
Q 018919 198 WLQTIT--KLPILV-KGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 198 ~i~~~~--~~pv~v-K~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++++.+ ++||+. .++.+.++|.+++++|||+|.+.
T Consensus 290 ~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 290 EMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 999998 799865 45789999999999999999984
No 337
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.20 E-value=0.047 Score=50.91 Aligned_cols=92 Identities=14% Similarity=0.238 Sum_probs=58.8
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.=|=.+-.++++ +-.+|||+|++-.|++
T Consensus 49 i~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 128 (315)
T 3si9_A 49 VEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYY 128 (315)
T ss_dssp HHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45577899999998665432110 111123455666666667899998766666777664 4458999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+. -.++++.++++.+.+
T Consensus 129 ~~---~~~~~l~~~f~~va~ 145 (315)
T 3si9_A 129 NR---PNQRGLYTHFSSIAK 145 (315)
T ss_dssp SC---CCHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHH
Confidence 63 234555555544433
No 338
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.20 E-value=1.9 Score=39.80 Aligned_cols=178 Identities=11% Similarity=0.098 Sum_probs=103.1
Q ss_pred cceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHH-------hhCC-CceEEEEeecCChhHH
Q 018919 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------STGP-GIRFFQLYVYKDRNVV 138 (349)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~-------~~~~-~~~~~Ql~~~~~~~~~ 138 (349)
.|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ + ++...+.+|.. +... .+.+..... .+...+
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~-~~t~~a 91 (313)
T 3dz1_A 13 FAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSA-PGFAAM 91 (313)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCC-SSHHHH
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCC-CCHHHH
Confidence 36667777533333444555777777888986554 2 33445666532 2222 345555432 456677
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcC--CcEEEEEe---
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITK--LPILVKGV--- 212 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~--~pv~vK~v--- 212 (349)
.++++.+++.|++++.+. .|.. .| +.+ ..+..+.+.+.++ +||++=.+
T Consensus 92 i~la~~A~~~Gadavlv~--~P~~------------~~------------s~~~l~~~f~~va~a~~~~lPiilYn~P~~ 145 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIA--PPPS------------LR------------TDEQITTYFRQATEAIGDDVPWVLQDYPLT 145 (313)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCTT------------CC------------SHHHHHHHHHHHHHHHCTTSCEEEEECHHH
T ss_pred HHHHHHHHHcCCCEEEEC--CCCC------------CC------------CHHHHHHHHHHHHHhCCCCCcEEEEeCccc
Confidence 889999999999998762 2310 01 111 2566788888888 99998664
Q ss_pred ----cCHHHHHHHHH-c-CCCEEEEecCCCCCCCCchhhHHHHHHHHHHhc----CCCcEEEecCCCCHHHHHH-HHHhC
Q 018919 213 ----LTAEDARIAVQ-A-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQ----GRIPVFLDGGVRRGTDVFK-ALALG 281 (349)
Q Consensus 213 ----~~~~~a~~a~~-~-G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~----~~ipvia~GGI~~~~dv~k-al~~G 281 (349)
.+++...++.+ . .+-+|.-+. ...+..+.++.+..+ +++.|+ +|. ....+. ++++|
T Consensus 146 tg~~l~~~~~~~La~~~pnIvgiKd~~---------~~~~~~~~~~~~~~~~~~~~~f~v~-~G~---d~~~l~~~l~~G 212 (313)
T 3dz1_A 146 LSVVMTPKVIRQIVMDSASCVMLKHED---------WPGLEKITTLRGFQKDGSLRPLSIL-CGN---GGLFLDFEMERG 212 (313)
T ss_dssp HCCCCCHHHHHHHHHHCSSEEEEEECC---------SSCHHHHHHHHHHHHHTSSCCCEEE-ECG---GGTTHHHHHHHT
T ss_pred cCcCCCHHHHHHHHHhCCCEEEEEcCC---------CCCHHHHHHHHHhcCccCCCCeEEE-eCC---cHHHHHHHHHCC
Confidence 46787777764 2 344444311 112444555555443 455554 331 111344 58999
Q ss_pred CCEEEEch
Q 018919 282 ASGIFIGR 289 (349)
Q Consensus 282 A~~V~ig~ 289 (349)
|++++.|.
T Consensus 213 ~~G~i~~~ 220 (313)
T 3dz1_A 213 ADGAMTGY 220 (313)
T ss_dssp CCEEEECC
T ss_pred CcEEEeCc
Confidence 99998775
No 339
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=95.19 E-value=0.12 Score=48.29 Aligned_cols=100 Identities=18% Similarity=0.099 Sum_probs=62.5
Q ss_pred CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCC---ch-HHHHHH
Q 018919 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG---KM-DEDVKW 198 (349)
Q Consensus 123 ~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~---~~-~~~i~~ 198 (349)
.+.++.+-...+.+.+.+.++.++++|+++|.++-.... +. +.+ .+. . .....++..+ .. ++.+++
T Consensus 212 ~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~---~~-~~~----~~~-~-~~~~gg~~g~~~~~~~~~~i~~ 281 (336)
T 1f76_A 212 VPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLD---RS-LVQ----GMK-N-CDQTGGLSGRPLQLKSTEIIRR 281 (336)
T ss_dssp CCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCC---CT-TST----TST-T-TTCSSEEEEGGGHHHHHHHHHH
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCccc---cc-ccc----ccc-c-cccCCCcCCchhHHHHHHHHHH
Confidence 466777654334456678889999999999987532210 11 000 000 0 0000000001 12 577899
Q ss_pred HHHhc--CCcEEEE-EecCHHHHHHHHHcCCCEEEEe
Q 018919 199 LQTIT--KLPILVK-GVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 199 i~~~~--~~pv~vK-~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
+++.+ ++||+.= ++.+.+++.+++++|||+|.+.
T Consensus 282 i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 282 LSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEee
Confidence 99988 8998754 4789999999999999999883
No 340
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=95.17 E-value=0.11 Score=50.49 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=83.6
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK 210 (349)
+++.+.+.++++.+.|++++.+++... ... .+.++.+|+.+ +++|.+.
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~-----------------------------~~~d~e~v~avR~a~G~d~~l~vD 248 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGAN-----------------------------VQDDIRRCRLARAAIGPDIAMAVD 248 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-----------------------------HHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCC-----------------------------HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 667777888888899999999887531 122 46788999877 5778765
Q ss_pred Ee--cCHHHHH----HHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CC
Q 018919 211 GV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 283 (349)
Q Consensus 211 ~v--~~~~~a~----~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~ 283 (349)
.- -+.+++. .+.+.|++.|-- ...+..++.+.++++.+. .+||++++.+.+..++.++++.| +|
T Consensus 249 an~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d 319 (441)
T 2hxt_A 249 ANQRWDVGPAIDWMRQLAEFDIAWIEE--------PTSPDDVLGHAAIRQGIT-PVPVSTGEHTQNRVVFKQLLQAGAVD 319 (441)
T ss_dssp CTTCCCHHHHHHHHHTTGGGCCSCEEC--------CSCTTCHHHHHHHHHHHT-TSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeeeC--------CCCHHHHHHHHHHHhhCC-CCCEEEeCCcCCHHHHHHHHHcCCCC
Confidence 32 3555543 345567776521 011235677777877662 59999999999999999999987 79
Q ss_pred EEEEc
Q 018919 284 GIFIG 288 (349)
Q Consensus 284 ~V~ig 288 (349)
.|++-
T Consensus 320 ~v~ik 324 (441)
T 2hxt_A 320 LIQID 324 (441)
T ss_dssp EECCC
T ss_pred EEEeC
Confidence 99884
No 341
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=95.17 E-value=0.15 Score=48.41 Aligned_cols=71 Identities=13% Similarity=0.062 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCHH
Q 018919 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTAE 216 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~~ 216 (349)
...++++++++.|++.|.++..... ..| +..++.++++|+.+++||++-+-.+++
T Consensus 252 ~~~~~a~~l~~~G~d~i~v~~~~~~------------~~~-------------~~~~~~~~~v~~~~~iPvi~~Ggit~~ 306 (364)
T 1vyr_A 252 DALYLIEELAKRGIAYLHMSETDLA------------GGK-------------PYSEAFRQKVRERFHGVIIGAGAYTAE 306 (364)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCBTT------------BCC-------------CCCHHHHHHHHHHCCSEEEEESSCCHH
T ss_pred HHHHHHHHHHHhCCCEEEEecCccc------------CCC-------------cccHHHHHHHHHHCCCCEEEECCcCHH
Confidence 4566788999999999987642110 001 001677899999999999887756999
Q ss_pred HHHHHHHcC-CCEEEEe
Q 018919 217 DARIAVQAG-AAGIIVS 232 (349)
Q Consensus 217 ~a~~a~~~G-~d~I~v~ 232 (349)
+++.+++.| ||+|.+.
T Consensus 307 ~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 307 KAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp HHHHHHHTTSCSEEEES
T ss_pred HHHHHHHCCCccEEEEC
Confidence 999999998 9999883
No 342
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.16 E-value=0.082 Score=48.60 Aligned_cols=91 Identities=18% Similarity=0.324 Sum_probs=57.2
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+.+.|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.-|=.+-.++++ |-++|||++++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 4567889999999966544211111 1123455556666667899987666555566654 3348999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLR 311 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~ 311 (349)
+. -.++++.++++.+.
T Consensus 107 ~~---~s~~~l~~~f~~ia 122 (289)
T 2yxg_A 107 NK---PTQEGLRKHFGKVA 122 (289)
T ss_dssp SC---CCHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHH
Confidence 53 23455555554443
No 343
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.14 E-value=0.059 Score=49.97 Aligned_cols=90 Identities=21% Similarity=0.304 Sum_probs=57.5
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.-|=.+-.++++ +-.+|||+|++-.|++
T Consensus 42 v~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 121 (304)
T 3l21_A 42 ANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYY 121 (304)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45577899999999765442111 111123455666666777899998776666677664 3348999999999987
Q ss_pred HHHhhcCHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEML 310 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l 310 (349)
+. -.++++.++++.+
T Consensus 122 ~~---~s~~~l~~~f~~v 136 (304)
T 3l21_A 122 SK---PPQRGLQAHFTAV 136 (304)
T ss_dssp SC---CCHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHH
Confidence 63 1345554444443
No 344
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=95.13 E-value=0.36 Score=45.20 Aligned_cols=116 Identities=22% Similarity=0.183 Sum_probs=82.4
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVK 210 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK 210 (349)
.+++.+.+.++++.+.|++++.++++.. ++. .+.++.+|+.- ++++.+-
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-----------------------------~~~d~~~v~avr~~g~~~~l~vD 188 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKIKVGEN-----------------------------LKEDIEAVEEIAKVTRGAKYIVD 188 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-----------------------------HHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEeecCC-----------------------------HHHHHHHHHHHHhhCCCCeEEEE
Confidence 4677777788888899999999877531 111 45688888762 3566553
Q ss_pred Ee--cCHHH----HHHHHHcCCC--EEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-
Q 018919 211 GV--LTAED----ARIAVQAGAA--GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG- 281 (349)
Q Consensus 211 ~v--~~~~~----a~~a~~~G~d--~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G- 281 (349)
.- -+.++ ++.+.+.|++ .|- + ...+..++.+.++++.+ ++||++++.+.+..|+.+++..|
T Consensus 189 an~~~~~~~a~~~~~~l~~~~i~~~~iE-------~-P~~~~~~~~~~~l~~~~--~ipia~dE~~~~~~~~~~~i~~~~ 258 (345)
T 2zad_A 189 ANMGYTQKEAVEFARAVYQKGIDIAVYE-------Q-PVRREDIEGLKFVRFHS--PFPVAADESARTKFDVMRLVKEEA 258 (345)
T ss_dssp CTTCSCHHHHHHHHHHHHHTTCCCSEEE-------C-CSCTTCHHHHHHHHHHS--SSCEEESTTCCSHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeeeee-------C-CCCcccHHHHHHHHHhC--CCCEEEeCCcCCHHHHHHHHHhCC
Confidence 21 24444 4556778888 552 1 01233577788888776 79999999999999999999987
Q ss_pred CCEEEE
Q 018919 282 ASGIFI 287 (349)
Q Consensus 282 A~~V~i 287 (349)
+|.|++
T Consensus 259 ~d~v~i 264 (345)
T 2zad_A 259 VDYVNI 264 (345)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 899999
No 345
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=95.12 E-value=0.16 Score=46.81 Aligned_cols=161 Identities=22% Similarity=0.285 Sum_probs=91.5
Q ss_pred HHHHHHHHcCCeEEecCCCCCCHHHHHhhC---CCceEEEEee--------cCChhHHHHHHHHHHHcCCCEEE--EecC
Q 018919 92 ATARAASAAGTIMTLSSWSTSSVEEVASTG---PGIRFFQLYV--------YKDRNVVAQLVRRAERAGFKAIA--LTVD 158 (349)
Q Consensus 92 ~la~aa~~~G~~~~~~~~~~~~~e~i~~~~---~~~~~~Ql~~--------~~~~~~~~~~~~~~~~~G~~~i~--i~~d 158 (349)
.+..++.+.|.-.++.+-.. ++++.-.. .+..+-.+.. ..+...+.--++.+.+.|++++. ++++
T Consensus 75 ~~~~~~~~~Gvdavl~~~gi--~~d~~Li~~L~~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~AvrlGADaV~~l~~i~ 152 (307)
T 3fok_A 75 RMAIALSRPGVDGVLGTPDI--IDDLAALGLLDDKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMVDRGVDFAKTLVRIN 152 (307)
T ss_dssp HHHHHHHSTTCCEEEECHHH--HHHHHHTTCCTTCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHHHHTCCEEEEEEEEC
T ss_pred HHHHHHhccCCCEEEECcch--hhcccceEEecCcccccccCccccccCCCCccccccccCHHHHHHCCCCEEEEEEEEC
Confidence 56666788898888754322 24432111 1221112221 11111222246677788999976 5554
Q ss_pred CCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHH---HHhcCCcEEEE--E-------e---cCHH----HHH
Q 018919 159 TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWL---QTITKLPILVK--G-------V---LTAE----DAR 219 (349)
Q Consensus 159 ~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i---~~~~~~pv~vK--~-------v---~~~~----~a~ 219 (349)
.-. |. +.+.++.+.++ .+.+++|+++- . + .+++ -++
T Consensus 153 ~Gs--------------~~-----------e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaR 207 (307)
T 3fok_A 153 LSD--------------AG-----------TAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVA 207 (307)
T ss_dssp TTC--------------TT-----------HHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHH
T ss_pred CCC--------------hh-----------HHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHH
Confidence 210 00 00113333333 34579998774 1 1 2343 367
Q ss_pred HHHHcCCC----EEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCC--HHHHH----HHHH-hCCCEEEEc
Q 018919 220 IAVQAGAA----GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR--GTDVF----KALA-LGASGIFIG 288 (349)
Q Consensus 220 ~a~~~G~d----~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~--~~dv~----kal~-~GA~~V~ig 288 (349)
.+.+.|+| .|.+-- . +...++.+.+ .+||+..||=.. .++++ +++. .||.++.+|
T Consensus 208 iAaELGADs~~tivK~~y-------~-----e~f~~Vv~a~--~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vG 273 (307)
T 3fok_A 208 IAAGLGNDSSYTWMKLPV-------V-----EEMERVMEST--TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVG 273 (307)
T ss_dssp HHHTCSSCCSSEEEEEEC-------C-----TTHHHHGGGC--SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEEC
T ss_pred HHHHhCCCcCCCEEEeCC-------c-----HHHHHHHHhC--CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeec
Confidence 78999999 888821 1 3346666665 699999999874 45655 4667 699999999
Q ss_pred hHHHH
Q 018919 289 RPVVY 293 (349)
Q Consensus 289 ~~~l~ 293 (349)
|-+++
T Consensus 274 RNIfQ 278 (307)
T 3fok_A 274 RTLLY 278 (307)
T ss_dssp TTTSS
T ss_pred hhhcc
Confidence 97754
No 346
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=95.12 E-value=0.21 Score=47.06 Aligned_cols=88 Identities=18% Similarity=0.155 Sum_probs=61.5
Q ss_pred ceEEEEeec------CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHH
Q 018919 124 IRFFQLYVY------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDV 196 (349)
Q Consensus 124 ~~~~Ql~~~------~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i 196 (349)
+.++.+-.. .+.+...++++.+++.|++.|.++...... ....| ..+.. ++.+
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~---------~~~~~-----------~~~~~~~~~~ 280 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVL---------RVRIP-----------LAPGFQVPFA 280 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCS---------SSCCC-----------CCTTTTHHHH
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCc---------ccccC-----------CCccccHHHH
Confidence 466666431 245667788999999999999886532110 00001 01223 7789
Q ss_pred HHHHHhcCCcEEEEE-ecCHHHHHHHHHcC-CCEEEE
Q 018919 197 KWLQTITKLPILVKG-VLTAEDARIAVQAG-AAGIIV 231 (349)
Q Consensus 197 ~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G-~d~I~v 231 (349)
+++++.+++||++-+ +.++++|+.+++.| +|.|.+
T Consensus 281 ~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 281 DAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp HHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEe
Confidence 999999999998765 46899999999999 999988
No 347
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.12 E-value=0.062 Score=50.10 Aligned_cols=92 Identities=21% Similarity=0.330 Sum_probs=58.5
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.-|=.+-.++++ +-++|||+|++-.|++
T Consensus 50 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y 129 (314)
T 3qze_A 50 VDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYY 129 (314)
T ss_dssp HHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 34567899999999665332110 111123455556666667899998766666677665 3358999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+. -.++++.++++.+.+
T Consensus 130 ~~---~s~~~l~~~f~~va~ 146 (314)
T 3qze_A 130 NK---PTQEGMYQHFRHIAE 146 (314)
T ss_dssp SC---CCHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHH
Confidence 63 234555555554433
No 348
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=95.11 E-value=0.029 Score=50.68 Aligned_cols=40 Identities=13% Similarity=0.226 Sum_probs=33.4
Q ss_pred HHHHHHHHH-hcC-CcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQT-ITK-LPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~-~~~-~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
.+.++.+++ ..+ +||++-+ +.+++++..+.+.|+|+|.+.
T Consensus 165 ~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVg 207 (268)
T 2htm_A 165 RALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVN 207 (268)
T ss_dssp HHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 355888888 567 9988755 689999999999999999984
No 349
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=95.11 E-value=0.18 Score=47.57 Aligned_cols=78 Identities=18% Similarity=0.290 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEEE-ec
Q 018919 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKG-VL 213 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~-v~ 213 (349)
.+.+.++.++++|+++|.++-..... ++. +.. .+ ..+.. |+.++++++.+ ++||++-+ +.
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~---------g~~-g~~--~~-----~~~~~~~~~i~~ik~~~~~iPVianGgI~ 207 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALL---------ALS-TKA--NR-----EIPPLRHDWVHRLKGDFPQLTFVTNGGIR 207 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC---------------------------CCCCCHHHHHHHHHHCTTSEEEEESSCC
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhc---------ccC-ccc--cc-----CCCcccHHHHHHHHHhCCCCeEEEECCcC
Confidence 56788899999999999886432110 111 000 00 01123 88999999998 89988755 57
Q ss_pred CHHHHHHHHHcCCCEEEEe
Q 018919 214 TAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 214 ~~~~a~~a~~~G~d~I~v~ 232 (349)
+++++..+++ |||+|.+.
T Consensus 208 s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 208 SLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp SHHHHHHHHT-TSSEEEEC
T ss_pred CHHHHHHHHh-CCCEEEEC
Confidence 9999999998 99999984
No 350
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.10 E-value=0.079 Score=49.78 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=56.9
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.-|=.+-.++++ |-.+|||+|++-.|++
T Consensus 61 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 140 (332)
T 2r8w_A 61 IARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSY 140 (332)
T ss_dssp HHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 3456788999999976544211101 1123555566666667899987655555566553 3348999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+. -.++++.++++.+.+
T Consensus 141 ~~---~s~~~l~~~f~~VA~ 157 (332)
T 2r8w_A 141 TP---LTQEEAYHHFAAVAG 157 (332)
T ss_dssp SC---CCHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHH
Confidence 53 234555555544433
No 351
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=95.10 E-value=1.2 Score=41.39 Aligned_cols=181 Identities=13% Similarity=0.110 Sum_probs=105.4
Q ss_pred ceeecccc-cccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChhH
Q 018919 73 PIMIAPTA-MQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (349)
Q Consensus 73 Pi~iApm~-~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~~ 137 (349)
|-++.|+. -.+-.+.+.-..+++-.-+.|+.+++ + +....+.+|..+ . .. -+.+..... .+-..
T Consensus 16 ~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ 94 (318)
T 3qfe_A 16 CPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGA-HSTRQ 94 (318)
T ss_dssp EECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCC-SSHHH
T ss_pred EeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHH
Confidence 55666764 22223444455777777788987654 2 334456665322 1 22 355666533 46667
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe----
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV---- 212 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v---- 212 (349)
..++++.+++.|++++.+. .|.. |.-| .+.+ ..+..+.+.+.+++||++=.+
T Consensus 95 ai~la~~a~~~Gadavlv~--~P~y----------~~kp-----------~~~~~l~~~f~~ia~a~~lPiilYn~P~~t 151 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVL--PPAY----------FGKA-----------TTPPVIKSFFDDVSCQSPLPVVIYNFPGVC 151 (318)
T ss_dssp HHHHHHHHHHHTCSEEEEC--CCCC-------------C-----------CCHHHHHHHHHHHHHHCSSCEEEEECCC--
T ss_pred HHHHHHHHHHcCCCEEEEe--CCcc----------cCCC-----------CCHHHHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 7889999999999998762 2311 0001 0111 256678888888999988664
Q ss_pred ----cCHHHHHHHHH-cC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhc-CCCcEEEecCCCCHHHHHHHHHhCCCEE
Q 018919 213 ----LTAEDARIAVQ-AG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGI 285 (349)
Q Consensus 213 ----~~~~~a~~a~~-~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~-~~ipvia~GGI~~~~dv~kal~~GA~~V 285 (349)
.+++...++.+ .. +-+|.-+. .++..+.++.+.+. +++.|+. |- ...++.++++||+++
T Consensus 152 ~g~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~f~v~~-G~---d~~~l~~l~~G~~G~ 217 (318)
T 3qfe_A 152 NGIDLDSDMITTIARKNPNVVGVKLTC----------ASVGKITRLAATLPPAAFSVFG-GQ---SDFLIGGLSVGSAGC 217 (318)
T ss_dssp --CCCCHHHHHHHHHHCTTEEEEEESS----------CCHHHHHHHHHHSCGGGCEEEE-SC---GGGHHHHHHTTCCEE
T ss_pred CCCCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCEEEEE-ec---HHHHHHHHHCCCCEE
Confidence 34677777765 32 33333321 13445556655542 3455543 31 245678899999999
Q ss_pred EEchHH
Q 018919 286 FIGRPV 291 (349)
Q Consensus 286 ~ig~~~ 291 (349)
+-+.+-
T Consensus 218 is~~an 223 (318)
T 3qfe_A 218 IAAFAN 223 (318)
T ss_dssp ECGGGG
T ss_pred EecHHH
Confidence 988753
No 352
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=95.08 E-value=0.34 Score=46.28 Aligned_cols=138 Identities=13% Similarity=0.083 Sum_probs=86.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhh--h--hcCCCCcCc--c-cccCCC-CCCchHHHHHHHHHhcC
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIK--N--RFTLPPFLT--L-KNFQGL-DLGKMDEDVKWLQTITK 204 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~--~--~~~~p~~~~--~-~~~~~~-~~~~~~~~i~~i~~~~~ 204 (349)
.+.+...++++.+.++|++++-...-.| +.+- + .|+.+.+.+ . .-+..+ ...+.++.|++.++..+
T Consensus 41 Gsle~A~~li~~Ak~aGAdavKfQ~~k~------~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~G 114 (385)
T 1vli_A 41 GKLDQAFALIDAAAEAGADAVKFQMFQA------DRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQ 114 (385)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCBCG------GGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHhCCCEEeeeeecc------CcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcC
Confidence 4667788999999999999986533222 1100 0 011110000 0 000000 11122677888888889
Q ss_pred CcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH----h
Q 018919 205 LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA----L 280 (349)
Q Consensus 205 ~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~----~ 280 (349)
++++. .+.+.+.+..+.+.|+|.+.|... ....+..|.++.+. +.|||.+-|..|-+++..|+. .
T Consensus 115 i~~~s-tpfD~~svd~l~~~~vd~~KIgS~-------~~~N~pLL~~va~~---gKPViLStGmaTl~Ei~~Ave~i~~~ 183 (385)
T 1vli_A 115 VIFLS-TVCDEGSADLLQSTSPSAFKIASY-------EINHLPLLKYVARL---NRPMIFSTAGAEISDVHEAWRTIRAE 183 (385)
T ss_dssp CEEEC-BCCSHHHHHHHHTTCCSCEEECGG-------GTTCHHHHHHHHTT---CSCEEEECTTCCHHHHHHHHHHHHTT
T ss_pred CcEEE-ccCCHHHHHHHHhcCCCEEEECcc-------cccCHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHC
Confidence 98874 567889999999999999999532 12246677766643 799999999999999887765 4
Q ss_pred CCCEEEE
Q 018919 281 GASGIFI 287 (349)
Q Consensus 281 GA~~V~i 287 (349)
|..-|.+
T Consensus 184 Gn~~iiL 190 (385)
T 1vli_A 184 GNNQIAI 190 (385)
T ss_dssp TCCCEEE
T ss_pred CCCcEEE
Confidence 6644444
No 353
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=95.08 E-value=0.17 Score=48.31 Aligned_cols=119 Identities=16% Similarity=0.102 Sum_probs=85.1
Q ss_pred CChhHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEE
Q 018919 133 KDRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPIL 208 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~-G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~ 208 (349)
.+++.+.+.++++.+. |++.+-+.++.+ +++. .+.++.+|+.+ +.++.
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~----------------------------~~~~d~~~v~avR~a~G~~~~l~ 217 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHG----------------------------DLATDEAMIKGLRALLGPDIALM 217 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSS----------------------------CHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCC----------------------------CHHHHHHHHHHHHHHhCCCCeEE
Confidence 4677777788888888 999998877532 1122 46788899886 57787
Q ss_pred EEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-
Q 018919 209 VKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG- 281 (349)
Q Consensus 209 vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G- 281 (349)
+..- -+.++| +.+.+.|++.|- + ...+..++.+.++++.. .+||+++..+.+..|+.++++.|
T Consensus 218 vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a 287 (383)
T 3toy_A 218 LDFNQSLDPAEATRRIARLADYDLTWIE-------E-PVPQENLSGHAAVRERS--EIPIQAGENWWFPRGFAEAIAAGA 287 (383)
T ss_dssp EECTTCSCHHHHHHHHHHHGGGCCSEEE-------C-CSCTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHHHTC
T ss_pred EeCCCCCCHHHHHHHHHHHHhhCCCEEE-------C-CCCcchHHHHHHHHhhc--CCCEEeCCCcCCHHHHHHHHHcCC
Confidence 7542 345554 556667877763 1 11223567778888776 79999999999999999999987
Q ss_pred CCEEEEch
Q 018919 282 ASGIFIGR 289 (349)
Q Consensus 282 A~~V~ig~ 289 (349)
+|.|++--
T Consensus 288 ~d~v~ik~ 295 (383)
T 3toy_A 288 SDFIMPDL 295 (383)
T ss_dssp CSEECCCT
T ss_pred CCEEEeCc
Confidence 78888764
No 354
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.05 E-value=0.052 Score=50.64 Aligned_cols=91 Identities=13% Similarity=0.110 Sum_probs=57.9
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.-|=.+-.++++ +-.+|||+|++-.|++
T Consensus 51 v~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 130 (315)
T 3na8_A 51 IERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISY 130 (315)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45577899999998665332110 111123455666666667899998766566666664 4458999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLR 311 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~ 311 (349)
+. -.++++.++++.+.
T Consensus 131 ~~---~s~~~l~~~f~~va 146 (315)
T 3na8_A 131 WK---LNEAEVFQHYRAVG 146 (315)
T ss_dssp SC---CCHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHH
Confidence 63 23455555544443
No 355
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=95.05 E-value=0.12 Score=49.75 Aligned_cols=130 Identities=19% Similarity=0.152 Sum_probs=87.5
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK 210 (349)
+++.+.+.++++.+.|++++-+.+.++..+.. +. .+. ..+.+. .+.++.+|+.+ +.+|.+.
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~------g~-~~~---------~~~~~~d~~~v~avR~a~G~d~~l~vD 214 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYD------GH-QPS---------LEDLERSEAFCKQIRAAVGTKADLLFG 214 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTC------SB-CCC---------HHHHHHHHHHHHHHHHHHGGGSEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccc------cc-ccc---------HHHHHHHHHHHHHHHHHcCCCCeEEEe
Confidence 56777777778888899999888765421100 00 000 001122 46688999887 5788876
Q ss_pred Ee--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CC
Q 018919 211 GV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 283 (349)
Q Consensus 211 ~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~ 283 (349)
.- -+.++| +.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..|+.++++.| +|
T Consensus 215 an~~~~~~~A~~~~~~l~~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~d 284 (404)
T 4e5t_A 215 THGQFTVSGAKRLARRLEAYDPLWFEE--------PIPPEKPEDMAEVARYT--SIPVATGERLCTKYEFSRVLETGAAS 284 (404)
T ss_dssp CCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHHHTCCS
T ss_pred CCCCcCHHHHHHHHHHHhhcCCcEEEC--------CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHhCCCC
Confidence 42 345554 5566788887741 11223577788888876 79999999999999999999987 78
Q ss_pred EEEEch
Q 018919 284 GIFIGR 289 (349)
Q Consensus 284 ~V~ig~ 289 (349)
.|++--
T Consensus 285 ~v~~d~ 290 (404)
T 4e5t_A 285 ILQMNL 290 (404)
T ss_dssp EECCCT
T ss_pred EEecCc
Confidence 888764
No 356
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=95.03 E-value=1.1 Score=40.96 Aligned_cols=133 Identities=21% Similarity=0.270 Sum_probs=77.4
Q ss_pred hHHHHHHHHHcCCeEEecCCC------------CCCHHHHH-------hhCCCceEE-EE-eec--CChhHHHH-HHHHH
Q 018919 90 EYATARAASAAGTIMTLSSWS------------TSSVEEVA-------STGPGIRFF-QL-YVY--KDRNVVAQ-LVRRA 145 (349)
Q Consensus 90 ~~~la~aa~~~G~~~~~~~~~------------~~~~e~i~-------~~~~~~~~~-Ql-~~~--~~~~~~~~-~~~~~ 145 (349)
|..+|+.+.++|+..++...+ ..+++|+. +..+.++.+ -+ |++ .+++...+ ..+.+
T Consensus 43 Da~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 122 (281)
T 1oy0_A 43 DYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFL 122 (281)
T ss_dssp SHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHHHHHH
Confidence 558999999999998864321 13455532 223333332 11 111 24554444 44444
Q ss_pred HHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEE---------------E
Q 018919 146 ERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILV---------------K 210 (349)
Q Consensus 146 ~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~v---------------K 210 (349)
+++|++++-|- |. .+..+.|+.+.+. ++||+. |
T Consensus 123 ~eaGa~aVklE-dg------------------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf~ 170 (281)
T 1oy0_A 123 KDGGAHAVKLE-GG------------------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGFR 170 (281)
T ss_dssp HTTCCSEEEEE-BS------------------------------GGGHHHHHHHHHH-TCCEEEEEECCC----------
T ss_pred HHhCCeEEEEC-Cc------------------------------HHHHHHHHHHHHC-CCCEEeeecCCcceecccCCeE
Confidence 55898887542 11 0114567777654 788761 1
Q ss_pred Ee-c------CHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEec
Q 018919 211 GV-L------TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 266 (349)
Q Consensus 211 ~v-~------~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~G 266 (349)
.. . ..++|+.+.++|||.|++-. .+ .+...++.+.+ ++|+|+-|
T Consensus 171 v~grt~~a~~~i~rA~a~~eAGA~~ivlE~---------vp-~~~a~~it~~l--~iP~igIG 221 (281)
T 1oy0_A 171 VQGRGDAAEQTIADAIAVAEAGAFAVVMEM---------VP-AELATQITGKL--TIPTVGIG 221 (281)
T ss_dssp ----CHHHHHHHHHHHHHHHHTCSEEEEES---------CC-HHHHHHHHHHC--SSCEEEES
T ss_pred EEeCcHHHHHHHHHHHHHHHcCCcEEEEec---------CC-HHHHHHHHHhC--CCCEEEeC
Confidence 11 1 12568889999999999832 22 25677888887 79999765
No 357
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=95.02 E-value=0.22 Score=47.77 Aligned_cols=121 Identities=16% Similarity=0.142 Sum_probs=84.6
Q ss_pred CChhHHHHHHHHHHHc---CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCc
Q 018919 133 KDRNVVAQLVRRAERA---GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLP 206 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~---G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~p 206 (349)
.+++.+.+.++++.+. |++.+-+.++.+ +++. .+.++.+|+.+ +.+
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~----------------------------~~~~d~~~v~avR~a~G~~~~ 221 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGRD----------------------------DPAVDIETAEAVWDAVGRDTA 221 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCCS----------------------------SHHHHHHHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCCC----------------------------CHHHHHHHHHHHHHHhCCCCE
Confidence 3556667777777778 999998877542 1122 46688899887 577
Q ss_pred EEEEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh
Q 018919 207 ILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 280 (349)
Q Consensus 207 v~vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~ 280 (349)
+.+..- -+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||+++..+.+..|+.++++.
T Consensus 222 l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 291 (390)
T 3ugv_A 222 LMVDFNQGLDMAEAMHRTRQIDDLGLEWIEE--------PVVYDNFDGYAQLRHDL--KTPLMIGENFYGPREMHQALQA 291 (390)
T ss_dssp EEEECTTCCCHHHHHHHHHHHTTSCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHHhc--CCCEEeCCCcCCHHHHHHHHHc
Confidence 877642 345554 4455667776631 11223567778888776 7999999999999999999998
Q ss_pred C-CCEEEEchHH
Q 018919 281 G-ASGIFIGRPV 291 (349)
Q Consensus 281 G-A~~V~ig~~~ 291 (349)
| +|.|++--..
T Consensus 292 ~a~d~v~ik~~~ 303 (390)
T 3ugv_A 292 GACDLVMPDFMR 303 (390)
T ss_dssp TCCSEECCBHHH
T ss_pred CCCCEEEeCccc
Confidence 6 7888876544
No 358
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=94.99 E-value=0.059 Score=51.64 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=86.1
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++...+.++++.+.|++++.+++.+...+.. .+++. +.+ +. ..+.+. .+.++.+|+.+ +++|.+
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~----~~~~~-~gg-~~-----~~~~~~~~e~v~avr~a~G~d~~l~v 204 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSA----LQHVT-RRS-MS-----AEAIELAYRRVKAVRDAAGPEIELMV 204 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTE----EECCB-TTB-CC-----HHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccccccc----ccccc-cCC-cc-----hhhHHHHHHHHHHHHHhcCCCCEEEE
Confidence 366777778888889999999988764211000 00000 000 00 001123 56789999887 578887
Q ss_pred EEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- .+.+++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.+..++.++++.| +
T Consensus 205 D~n~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~ 274 (392)
T 2poz_A 205 DLSGGLTTDETIRFCRKIGELDICFVEE--------PCDPFDNGALKVISEQI--PLPIAVGERVYTRFGFRKIFELQAC 274 (392)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGCEEEEEC--------CSCTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHTTTCC
T ss_pred ECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcCCC
Confidence 642 355554 4455667665421 11233577888888876 79999999999999999999976 8
Q ss_pred CEEEEc
Q 018919 283 SGIFIG 288 (349)
Q Consensus 283 ~~V~ig 288 (349)
|.|++-
T Consensus 275 d~v~ik 280 (392)
T 2poz_A 275 GIIQPD 280 (392)
T ss_dssp SEECCC
T ss_pred CEEecC
Confidence 999873
No 359
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=94.99 E-value=0.078 Score=48.84 Aligned_cols=91 Identities=20% Similarity=0.276 Sum_probs=57.1
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHH
Q 018919 217 DARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPV 291 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~ 291 (349)
.++.+++.|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.-|=.+-.++++ |-++|||+|++-.|+
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 105 (294)
T 2ehh_A 26 LIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPY 105 (294)
T ss_dssp HHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 34567789999999976544211111 1123455556666667899987766656666654 334899999999998
Q ss_pred HHHHhhcCHHHHHHHHHHH
Q 018919 292 VYSLAAEGEKGVRRVLEML 310 (349)
Q Consensus 292 l~~~~~~G~~gv~~~l~~l 310 (349)
++. -.++++.++++.+
T Consensus 106 y~~---~s~~~l~~~f~~v 121 (294)
T 2ehh_A 106 YNK---PTQRGLYEHFKTV 121 (294)
T ss_dssp SSC---CCHHHHHHHHHHH
T ss_pred CCC---CCHHHHHHHHHHH
Confidence 753 2345555444444
No 360
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=94.98 E-value=0.1 Score=48.09 Aligned_cols=94 Identities=15% Similarity=0.150 Sum_probs=59.0
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-...-. ....+.+..+++.+.+++|||+.-|=.+-.++++ +-.+|||+|++-.|++
T Consensus 30 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 109 (294)
T 3b4u_A 30 ARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSY 109 (294)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 4557789999999976544211111 1123455555666666899987666556566654 3347999999999988
Q ss_pred HHHhhcCHHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLREE 313 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~e 313 (349)
+. .-.++++.++++.+.+.
T Consensus 110 ~~--~~s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 110 FK--NVSDDGLFAWFSAVFSK 128 (294)
T ss_dssp SC--SCCHHHHHHHHHHHHHH
T ss_pred CC--CCCHHHHHHHHHHHHHh
Confidence 63 01456666666655544
No 361
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.97 E-value=0.074 Score=50.21 Aligned_cols=90 Identities=19% Similarity=0.313 Sum_probs=56.4
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-..-.+.+..+++.+.+++|||+.-|=.+-.++++ |-++|||+|++-.|++
T Consensus 58 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 137 (343)
T 2v9d_A 58 IDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYY 137 (343)
T ss_dssp HHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSS
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45577899999999765442110 111123455566666667899987766556666654 3348999999999987
Q ss_pred HHHhhcCHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEML 310 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l 310 (349)
+.. .++++.++++.+
T Consensus 138 ~~~---s~~~l~~~f~~V 152 (343)
T 2v9d_A 138 WKV---SEANLIRYFEQV 152 (343)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 532 345554444443
No 362
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.97 E-value=0.077 Score=52.78 Aligned_cols=68 Identities=16% Similarity=0.223 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+.++.+.++|+|+|.+....|. -...++.+.++++.+ +++||++ |++.+.+++.++..+|||+|.+|
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~----~~~~~~~i~~i~~~~-~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGN----SVYQIAMVHYIKQKY-PHLQVIG-GNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCC----SHHHHHHHHHHHHHC-TTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEeeccCCc----chhHHHHHHHHHHhC-CCCceEe-cccchHHHHHHHHHcCCCEEEEC
Confidence 47788999999999999432221 122457788888876 3688876 67999999999999999999884
No 363
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=94.96 E-value=0.15 Score=48.55 Aligned_cols=118 Identities=11% Similarity=0.059 Sum_probs=81.9
Q ss_pred ChhHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 134 DRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~-G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
+++.+.+.++++.+. |+..+-+.++.+ +++. .+.++.+|+.+ +.++.+
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~----------------------------~~~~d~~~v~avR~~~g~~~~l~v 202 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHD----------------------------DPNIDIARLTAVRERVDSAVRIAI 202 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCS----------------------------SHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCC----------------------------CHHHHHHHHHHHHHHcCCCCcEEe
Confidence 567777777777788 999998887643 1112 46789999987 577877
Q ss_pred EEe--cCHHHHHH----HHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDARI----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a~~----a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- -+.++|.. +.+.|++.|- + ...+..++.+.++++.. .+||+++..+.+..|+.+++..| +
T Consensus 203 Dan~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~ 272 (372)
T 3tj4_A 203 DGNGKWDLPTCQRFCAAAKDLDIYWFE-------E-PLWYDDVTSHARLARNT--SIPIALGEQLYTVDAFRSFIDAGAV 272 (372)
T ss_dssp ECTTCCCHHHHHHHHHHTTTSCEEEEE-------S-CSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred eCCCCCCHHHHHHHHHHHhhcCCCEEE-------C-CCCchhHHHHHHHHhhc--CCCEEeCCCccCHHHHHHHHHcCCC
Confidence 642 35666543 3334444331 1 01123577778887776 79999999999999999999986 7
Q ss_pred CEEEEch
Q 018919 283 SGIFIGR 289 (349)
Q Consensus 283 ~~V~ig~ 289 (349)
|.|++--
T Consensus 273 d~v~~k~ 279 (372)
T 3tj4_A 273 AYVQPDV 279 (372)
T ss_dssp SEECCCT
T ss_pred CEEEeCc
Confidence 8988843
No 364
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=94.96 E-value=0.075 Score=49.39 Aligned_cols=95 Identities=15% Similarity=0.165 Sum_probs=57.1
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.-|=.+-.++++ |-.+|||++++-.|++
T Consensus 35 v~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 35 VDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred HHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 44567899999999665331100 111123455666666667899998755555566554 3348999999999976
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+....-.++++.++++.+.+
T Consensus 115 ~~~~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 115 GATFRVPEAQIFEFYARVSD 134 (309)
T ss_dssp TTTBCCCHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHH
Confidence 21001135555555544433
No 365
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=94.94 E-value=0.28 Score=45.92 Aligned_cols=143 Identities=11% Similarity=0.033 Sum_probs=90.5
Q ss_pred CCCceEEEEee--cCChhHHHHHHHHHHHc----CCC--EEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch
Q 018919 121 GPGIRFFQLYV--YKDRNVVAQLVRRAERA----GFK--AIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM 192 (349)
Q Consensus 121 ~~~~~~~Ql~~--~~~~~~~~~~~~~~~~~----G~~--~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~ 192 (349)
.+++..+|+.. ..|.+.+.+.++++.+. |++ -+.|.+.++.. |
T Consensus 93 v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T~e---------------G-------------- 143 (334)
T 3hjz_A 93 ISGRVSTEVDARLSFDTEATVKKARKLINLYKNFGIEKERILIKIAATWE---------------G-------------- 143 (334)
T ss_dssp CSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHH---------------H--------------
T ss_pred CCCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhhCCCCCcEEEEeCCCHH---------------H--------------
Confidence 45777788764 24666666666665543 544 45665533200 0
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEe-c---------CCCCCCC-CchhhHHHHHHHHHHh---cC
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVS-N---------HGARQLD-YVPATIMALEEVVKAT---QG 258 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~-~---------~gg~~~~-~~~~~~~~l~~i~~~~---~~ 258 (349)
.+.++.+.+. ++++-+-.+.+.+.+..|.++|+..|... | .|..... ...+....+.++.+.. +.
T Consensus 144 l~A~~~L~~~-GI~~N~TliFS~~Qa~~aa~AGa~~ISPFVgRi~D~~~~~~g~~~~~~~~d~Gv~~v~~i~~~y~~~g~ 222 (334)
T 3hjz_A 144 IKAAEILEKE-GIKCNLTLLFNFCQAVTCANANITLISPFVGRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYFKEKGF 222 (334)
T ss_dssp HHHHHHHHHT-TCCEEEESCCSHHHHHHHHHTTCSEECCBHHHHHHHHHHHHCCCCCCGGGCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHcCCcEEEeeccHHHHHhhhccCCcccccccCcHHHHHHHHHHHHHHcCC
Confidence 3456666544 89999988999999999999999888542 1 1211110 0112345555555443 33
Q ss_pred CCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHh
Q 018919 259 RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 296 (349)
Q Consensus 259 ~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~ 296 (349)
+..|++. .+|+..++.. .+|||.+-|.-.++..+.
T Consensus 223 ~T~vl~A-SfRn~~~v~~--laG~d~~Tipp~ll~~L~ 257 (334)
T 3hjz_A 223 KTEVMGA-SFRNLDEIKE--LAGCDLLTIAPKFLEELK 257 (334)
T ss_dssp CCEEEEB-CCSSHHHHHH--TTTCSEEEECHHHHHHHH
T ss_pred CCEEEEe-cCCCHHHHHH--HhCCCEEEcCHHHHHHHH
Confidence 5556555 5999999986 579999999988887664
No 366
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=94.93 E-value=0.081 Score=48.85 Aligned_cols=93 Identities=16% Similarity=0.265 Sum_probs=57.9
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHH
Q 018919 217 DARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPV 291 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~ 291 (349)
.++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.-|=.+-.++++ |-++|||+|++-.|+
T Consensus 26 lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 105 (297)
T 2rfg_A 26 LVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGY 105 (297)
T ss_dssp HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT
T ss_pred HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 355678899999998665332110 111123455556666667899887666555566654 334899999999998
Q ss_pred HHHHhhcCHHHHHHHHHHHHH
Q 018919 292 VYSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 292 l~~~~~~G~~gv~~~l~~l~~ 312 (349)
++. -.++++.++++.+.+
T Consensus 106 y~~---~s~~~l~~~f~~va~ 123 (297)
T 2rfg_A 106 YNR---PSQEGLYQHFKMVHD 123 (297)
T ss_dssp TTC---CCHHHHHHHHHHHHH
T ss_pred CCC---CCHHHHHHHHHHHHH
Confidence 763 245555555554433
No 367
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=94.90 E-value=0.078 Score=48.80 Aligned_cols=89 Identities=15% Similarity=0.225 Sum_probs=55.8
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHH----HhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL----ALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal----~~GA~~V~ig~~~l 292 (349)
++.+.+.|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.=|=.+-.++++.. ++|||++++-.|++
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (292)
T 2ojp_A 28 IDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYY 107 (292)
T ss_dssp HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 4456788999999976544211111 112345555666666789998776666666666533 37999999999987
Q ss_pred HHHhhcCHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEM 309 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~ 309 (349)
+.. .++++.++++.
T Consensus 108 ~~~---s~~~l~~~f~~ 121 (292)
T 2ojp_A 108 NRP---SQEGLYQHFKA 121 (292)
T ss_dssp SCC---CHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHH
Confidence 531 34554444443
No 368
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=94.90 E-value=0.14 Score=43.92 Aligned_cols=121 Identities=15% Similarity=0.185 Sum_probs=73.4
Q ss_pred CcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHHhhCCCceEEE-EeecCChhHHHHHHHHHHHcC
Q 018919 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQ-LYVYKDRNVVAQLVRRAERAG 149 (349)
Q Consensus 71 ~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~~Q-l~~~~~~~~~~~~~~~~~~~G 149 (349)
..|+++-|=-..++.....-..+. ...+.-+++|+... .+.. ++.. +..-+| +|. -|.......++.+....
T Consensus 56 gK~vivh~DlI~GLs~d~~ai~fL---~~~~pdGIIsTk~~-~i~~-Akk~-GL~tIqR~Fl-iDs~al~~~~~~I~~~k 128 (188)
T 1vkf_A 56 GKTVFVDMDFVNGLGEGEEAILFV---KKAGADGIITIKPK-NYVV-AKKN-GIPAVLRFFA-LDSKAVERGIEQIETLG 128 (188)
T ss_dssp TCEEEEEGGGEETCCSSHHHHHHH---HHHTCSEEEESCHH-HHHH-HHHT-TCCEEEEEEC-CSHHHHHHHHHHHHHHT
T ss_pred CCeEEEecCcccccCCCHHHHHHH---HhcCCCEEEcCcHH-HHHH-HHHc-CCEEeeEEEE-EEeHHHhhhhhhccccC
Confidence 467777773334443332222333 77777777776532 1111 1111 333333 344 46555566777777888
Q ss_pred CCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCE
Q 018919 150 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAG 228 (349)
Q Consensus 150 ~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~ 228 (349)
.|++++ +..++ .-+.++++ +++|+++.| +.+.|+++. +++||++
T Consensus 129 PD~iEi-LPg~v------------------------------~p~~I~~v---~~~PiIaGGlI~t~edv~~-l~aGA~a 173 (188)
T 1vkf_A 129 VDVVEV-LPGAV------------------------------APKVARKI---PGRTVIAAGLVETEEEARE-ILKHVSA 173 (188)
T ss_dssp CSEEEE-ESGGG------------------------------HHHHHTTS---TTSEEEEESCCCSHHHHHH-HTTTSSE
T ss_pred CCeEee-cCCCc------------------------------hHHHHHHh---cCCCEEEECCcCCHHHHHH-HHCCCeE
Confidence 888876 21110 02456666 689999988 589999999 9999999
Q ss_pred EEEec
Q 018919 229 IIVSN 233 (349)
Q Consensus 229 I~v~~ 233 (349)
|+.|+
T Consensus 174 IsTs~ 178 (188)
T 1vkf_A 174 ISTSS 178 (188)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99876
No 369
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=94.90 E-value=0.12 Score=49.59 Aligned_cols=116 Identities=13% Similarity=0.081 Sum_probs=84.0
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK 210 (349)
+++.+.+.++++.+.|++.+-+.++. +++. .+.++.+|+.+ +.++.+.
T Consensus 155 ~~e~~~~~a~~~~~~G~~~iKlK~g~-----------------------------~~~~d~~~v~avR~a~g~~~~l~vD 205 (392)
T 3ddm_A 155 NPENPEDVVARKAAEGYRAFKLKVGF-----------------------------DDARDVRNALHVRELLGAATPLMAD 205 (392)
T ss_dssp CSSSHHHHHHHHHHHTCCCEEEECSS-----------------------------CHHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC-----------------------------CHHHHHHHHHHHHHhcCCCceEEEe
Confidence 35667778888888999999887753 1112 46789999987 5788876
Q ss_pred Ee--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhh-HHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 211 GV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 211 ~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~-~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
.- -+.++| +.+.+.|++.|-= ...+.. ++.+.++++.. .+||+++..+.+..|+.++++.| +
T Consensus 206 aN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~ 275 (392)
T 3ddm_A 206 ANQGWDLPRARQMAQRLGPAQLDWLEE--------PLRADRPAAEWAELAQAA--PMPLAGGENIAGVAAFETALAARSL 275 (392)
T ss_dssp CTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCTTSCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHHTCE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEC--------CCCccchHHHHHHHHHhc--CCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 42 345554 5566778877731 111224 67788888776 79999999999999999999976 7
Q ss_pred CEEEEc
Q 018919 283 SGIFIG 288 (349)
Q Consensus 283 ~~V~ig 288 (349)
|.|++-
T Consensus 276 d~v~~k 281 (392)
T 3ddm_A 276 RVMQPD 281 (392)
T ss_dssp EEECCC
T ss_pred CEEEeC
Confidence 888874
No 370
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=94.90 E-value=0.21 Score=47.46 Aligned_cols=118 Identities=14% Similarity=0.203 Sum_probs=84.1
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++.+-+.++.. ++. .+.++.+|+.+ +.++.+
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~-----------------------------~~~d~~~v~avR~~~g~~~~l~v 189 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGS-----------------------------KELDVERIRMIREAAGDSITLRI 189 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-----------------------------HHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCC-----------------------------HHHHHHHHHHHHHHhCCCCeEEE
Confidence 4677777888888889999998877531 112 46788999887 577877
Q ss_pred EEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- -+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||+++..+.+..|+.+++..| +
T Consensus 190 DaN~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~~~~ 259 (368)
T 3q45_A 190 DANQGWSVETAIETLTLLEPYNIQHCEE--------PVSRNLYTALPKIRQAC--RIPIMADESCCNSFDAERLIQIQAC 259 (368)
T ss_dssp ECTTCBCHHHHHHHHHHHGGGCCSCEEC--------CBCGGGGGGHHHHHHTC--SSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred ECCCCCChHHHHHHHHHHhhcCCCEEEC--------CCChhHHHHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHHcCCC
Confidence 632 345554 4566678777631 11223456667777765 79999999999999999999975 7
Q ss_pred CEEEEch
Q 018919 283 SGIFIGR 289 (349)
Q Consensus 283 ~~V~ig~ 289 (349)
|.|++--
T Consensus 260 d~v~~k~ 266 (368)
T 3q45_A 260 DSFNLKL 266 (368)
T ss_dssp SEEEECT
T ss_pred CeEEech
Confidence 9998864
No 371
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=94.90 E-value=0.1 Score=50.14 Aligned_cols=130 Identities=15% Similarity=0.109 Sum_probs=86.6
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCC-CCCCchhHHhhhhcCCCCcCcccccCCCCCC----ch-HHHHHHHHHhc--CC
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDT-PRLGRREADIKNRFTLPPFLTLKNFQGLDLG----KM-DEDVKWLQTIT--KL 205 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~-p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~----~~-~~~i~~i~~~~--~~ 205 (349)
+++...+.++++.+.|++++.+++.. ...|.. +..|.+ + .++ +. .+.++.+|+.+ ++
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~s~~~----~----~~~~~~~~~~~e~v~avR~a~G~d~ 216 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNW-------NQQNLN----G----PLTDKILRLGYDRMAAIRDAVGPDV 216 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCB-------SCSCCC----S----SCCHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCcc-------ccCccc----C----CCchhHHHHHHHHHHHHHHhcCCCC
Confidence 66777778888889999999987521 000110 111110 0 122 23 46688999876 57
Q ss_pred cEEEEEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 018919 206 PILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 279 (349)
Q Consensus 206 pv~vK~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~ 279 (349)
+|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.+..++.++++
T Consensus 217 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 286 (407)
T 2o56_A 217 DIIAEMHAFTDTTSAIQFGRMIEELGIFYYEE--------PVMPLNPAQMKQVADKV--NIPLAAGERIYWRWGYRPFLE 286 (407)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC--------SSCSSSHHHHHHHHHHC--CSCEEECTTCCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHH
Confidence 8887642 34544 45566778876631 01223577888888877 799999999999999999999
Q ss_pred hC-CCEEEEc
Q 018919 280 LG-ASGIFIG 288 (349)
Q Consensus 280 ~G-A~~V~ig 288 (349)
.| +|.|++-
T Consensus 287 ~~~~d~v~ik 296 (407)
T 2o56_A 287 NGSLSVIQPD 296 (407)
T ss_dssp TTCCSEECCC
T ss_pred cCCCCEEecC
Confidence 87 7999884
No 372
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=94.87 E-value=2.2 Score=38.80 Aligned_cols=173 Identities=15% Similarity=0.174 Sum_probs=101.5
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------hCCCceEEEEeecCChhHHHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------TGPGIRFFQLYVYKDRNVVAQ 140 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~~~~~~~~Ql~~~~~~~~~~~ 140 (349)
|.++.|+. .+-.+.++-..+++-.-+.|+.+++ ++ +...+.+|-.+ ...+ .+...-. .+-..+.+
T Consensus 5 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~-~~t~~ai~ 81 (286)
T 2r91_A 5 APVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVAS-LNADEAIA 81 (286)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECCC-SSHHHHHH
T ss_pred EeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeCC-CCHHHHHH
Confidence 44566665 4434445555777777788987654 33 23456665322 2234 4455432 45566778
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCC-CCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe------
Q 018919 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTL-PPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV------ 212 (349)
Q Consensus 141 ~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~-p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v------ 212 (349)
+++.+++.|++++.+. .|.. .- | +++ ..+..+.+.+.+++||++=.+
T Consensus 82 la~~A~~~Gadavlv~--~P~y-----------~~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 136 (286)
T 2r91_A 82 LAKYAESRGAEAVASL--PPYY-----------FPRL------------SERQIAKYFRDLCSAVSIPVFLYNYPAAVGR 136 (286)
T ss_dssp HHHHHHHTTCSEEEEC--CSCS-----------STTC------------CHHHHHHHHHHHHHHCSSCEEEEECHHHHSS
T ss_pred HHHHHHhcCCCEEEEc--CCcC-----------CCCC------------CHHHHHHHHHHHHHhcCCCEEEEeChhhcCC
Confidence 8999999999998763 2321 10 0 111 256677888888999998664
Q ss_pred -cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchH
Q 018919 213 -LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 290 (349)
Q Consensus 213 -~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~ 290 (349)
.+++...+ --.+-+|.-+. .++..+.++.+ .++++.|+ +|- ..-++.++.+||+++.-+.+
T Consensus 137 ~l~~~~~~~--~pnivgiKds~----------gd~~~~~~~~~-~~~~f~v~-~G~---d~~~~~~l~~G~~G~is~~a 198 (286)
T 2r91_A 137 DVDARAAKE--LGCIRGVKDTN----------ESLAHTLAYKR-YLPQARVY-NGS---DSLVFASFAVRLDGVVASSA 198 (286)
T ss_dssp CCCHHHHHH--HSCEEEEEECC----------SCHHHHHHHHH-HCTTSEEE-ECC---GGGHHHHHHTTCSEECCGGG
T ss_pred CCCHHHHHh--cCCEEEEEeCC----------CCHHHHHHHHh-cCCCEEEE-Ecc---HHHHHHHHHcCCCEEEecHH
Confidence 35566555 22233333321 12444555555 54466654 442 24467889999999998874
No 373
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=94.87 E-value=0.1 Score=50.32 Aligned_cols=136 Identities=17% Similarity=0.103 Sum_probs=86.1
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCC-CCCCchhHHhhhhcCCCCcCcccccCCCC---CCch-HHHHHHHHHhc--CCc
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDT-PRLGRREADIKNRFTLPPFLTLKNFQGLD---LGKM-DEDVKWLQTIT--KLP 206 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~-p~~g~r~~d~~~~~~~p~~~~~~~~~~~~---~~~~-~~~i~~i~~~~--~~p 206 (349)
+++...+.++++.+.|++++.+++.. ...|.. +..| .+.....+.. +.+. .+.++.+|+.+ +++
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~~~--~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~ 220 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDD-------CVFQ--NRNRNYSGLLLADQLKMGEARIAAMREAMGDDAD 220 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCB-------TTTS--SCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccc-------cccc--cccccccCccchhHHHHHHHHHHHHHHhcCCCCE
Confidence 66777788888889999999987620 000110 0000 0000011111 1123 56789999887 578
Q ss_pred EEEEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh
Q 018919 207 ILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 280 (349)
Q Consensus 207 v~vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~ 280 (349)
|.+..- .+++++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.+..++.++++.
T Consensus 221 l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 290 (410)
T 2gl5_A 221 IIVEIHSLLGTNSAIQFAKAIEKYRIFLYEE--------PIHPLNSDNMQKVSRST--TIPIATGERSYTRWGYRELLEK 290 (410)
T ss_dssp EEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------SSCSSCHHHHHHHHHHC--SSCEEECTTCCTTHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhcCCCeEEC--------CCChhhHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHc
Confidence 887642 355554 4455667665421 01223577888888876 7999999999999999999998
Q ss_pred C-CCEEEEc
Q 018919 281 G-ASGIFIG 288 (349)
Q Consensus 281 G-A~~V~ig 288 (349)
| +|.|++-
T Consensus 291 ~~~d~v~ik 299 (410)
T 2gl5_A 291 QSIAVAQPD 299 (410)
T ss_dssp TCCSEECCC
T ss_pred CCCCEEecC
Confidence 6 7999874
No 374
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=94.82 E-value=0.062 Score=48.49 Aligned_cols=40 Identities=30% Similarity=0.462 Sum_probs=33.5
Q ss_pred HHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEec
Q 018919 193 DEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
.+.++++|+.+++|+++.. +.++++++.+.+ +||+++|.+
T Consensus 188 ~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS 228 (252)
T 3tha_A 188 QDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGT 228 (252)
T ss_dssp HHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEECH
T ss_pred HHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEECH
Confidence 4569999998899999876 579999998876 699999953
No 375
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=94.81 E-value=0.14 Score=48.60 Aligned_cols=70 Identities=13% Similarity=-0.010 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecC
Q 018919 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLT 214 (349)
Q Consensus 136 ~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~ 214 (349)
+...++++.+++.|++.|.++...-. . .+.+ ++.++++|+.+++||+.-+-.+
T Consensus 250 ~~~~~~a~~l~~~G~d~i~v~~~~~~--------------~------------~~~~~~~~~~~i~~~~~iPvi~~Ggi~ 303 (365)
T 2gou_A 250 LTYTAAAALLNKHRIVYLHIAEVDWD--------------D------------APDTPVSFKRALREAYQGVLIYAGRYN 303 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCBTT--------------B------------CCCCCHHHHHHHHHHCCSEEEEESSCC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcC--------------C------------CCCccHHHHHHHHHHCCCcEEEeCCCC
Confidence 44567889999999999987642100 0 0112 6778999999999998766559
Q ss_pred HHHHHHHHHcC-CCEEEE
Q 018919 215 AEDARIAVQAG-AAGIIV 231 (349)
Q Consensus 215 ~~~a~~a~~~G-~d~I~v 231 (349)
+++|+.+++.| ||+|.+
T Consensus 304 ~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 304 AEKAEQAINDGLADMIGF 321 (365)
T ss_dssp HHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHHHHCCCcceehh
Confidence 99999999998 999987
No 376
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=94.77 E-value=2.5 Score=39.02 Aligned_cols=181 Identities=14% Similarity=0.066 Sum_probs=103.8
Q ss_pred cceeeccccc-ccccCChhhHHHHHHHHHcCCeEEec-----CCCCCCHHHHHh-------h-CC-CceEEEEeecCChh
Q 018919 72 MPIMIAPTAM-QKMAHPEGEYATARAASAAGTIMTLS-----SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRN 136 (349)
Q Consensus 72 ~Pi~iApm~~-~~l~~~~~~~~la~aa~~~G~~~~~~-----~~~~~~~e~i~~-------~-~~-~~~~~Ql~~~~~~~ 136 (349)
.|.++.|+.- .+-.+.++-..+++-.-+.|+.+++- ++...+.+|..+ . .. -+.+...- . +..
T Consensus 16 ~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg-~-~t~ 93 (316)
T 3e96_A 16 SGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG-Y-ATS 93 (316)
T ss_dssp EECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHH
T ss_pred EEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC-c-CHH
Confidence 3666777754 33334455557777788889877652 233456665322 1 22 34566653 3 666
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe---
Q 018919 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV--- 212 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v--- 212 (349)
.+.++++.+++.|++++.+. .|.. .-| +.+ ..+..+.+.+.+++||++=.+
T Consensus 94 ~ai~la~~A~~~Gadavlv~--~P~y-----------~~~------------s~~~l~~~f~~va~a~~lPiilYn~g~~ 148 (316)
T 3e96_A 94 TAIELGNAAKAAGADAVMIH--MPIH-----------PYV------------TAGGVYAYFRDIIEALDFPSLVYFKDPE 148 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEEC--CCCC-----------SCC------------CHHHHHHHHHHHHHHHTSCEEEEECCTT
T ss_pred HHHHHHHHHHhcCCCEEEEc--CCCC-----------CCC------------CHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 77888999999999998763 3321 001 111 256678888888999998663
Q ss_pred cCHHHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHhCCCEEEEchH
Q 018919 213 LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGRP 290 (349)
Q Consensus 213 ~~~~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~-~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~ 290 (349)
.+++...++.+.. +-+|.-+. .++..+.++.+..++ ++.-+.+|. .. .-+..++.+||+++.-+.+
T Consensus 149 l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~f~~v~~G~-d~-~~~~~~l~~G~~G~is~~a 216 (316)
T 3e96_A 149 ISDRVLVDLAPLQNLVGVKYAI----------NDLPRFAKVVRSIPEEHQIAWICGT-AE-KWAPFFWHAGAKGFTSGLV 216 (316)
T ss_dssp SCTHHHHHHTTCTTEEEEEECC----------CCHHHHHHHHTTSCGGGCCEEEETT-CT-TTHHHHHHHTCCEEEESGG
T ss_pred CCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCceEEEeCC-hH-HHHHHHHHCCCCEEEechh
Confidence 5667777766432 22332221 123445555554432 343133442 10 1133467899999999885
Q ss_pred H
Q 018919 291 V 291 (349)
Q Consensus 291 ~ 291 (349)
-
T Consensus 217 n 217 (316)
T 3e96_A 217 N 217 (316)
T ss_dssp G
T ss_pred h
Confidence 3
No 377
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=94.75 E-value=0.7 Score=43.85 Aligned_cols=121 Identities=12% Similarity=0.029 Sum_probs=84.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++...+.+++..+.|+..+-+.++.. +.+. .+.++.+|+.+ ++++.+
T Consensus 145 ~~~~~~~~~a~~~~~~G~~~~K~Kvg~~----------------------------~~~~d~~~v~avR~~~g~~~~l~v 196 (377)
T 3my9_A 145 PDFDADLERMRAMVPAGHTVFKMKTGVK----------------------------PHAEELRILETMRGEFGERIDLRL 196 (377)
T ss_dssp SSHHHHHHHHHHHTTTTCCEEEEECSSS----------------------------CHHHHHHHHHHHHHHHGGGSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCC----------------------------cHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3556666666666677999998877531 1112 46688888886 578887
Q ss_pred EEe--cCH----HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTA----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~----~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- -+. +.++.+.+.|++.|-= ...+..++.+.++++.. .+||+++.-+.+..|+.++++.| +
T Consensus 197 Dan~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~ 266 (377)
T 3my9_A 197 DFNQALTPFGAMKILRDVDAFRPTFIEQ--------PVPRRHLDAMAGFAAAL--DTPILADESCFDAVDLMEVVRRQAA 266 (377)
T ss_dssp ECTTCCCTTTHHHHHHHHHTTCCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHHHHTCC
T ss_pred eCCCCcCHHHHHHHHHHHhhcCCCEEEC--------CCCccCHHHHHHHHHhC--CCCEEECCccCCHHHHHHHHHcCCC
Confidence 642 122 4456677788887631 11223577788888776 79999999999999999999976 8
Q ss_pred CEEEEchHH
Q 018919 283 SGIFIGRPV 291 (349)
Q Consensus 283 ~~V~ig~~~ 291 (349)
|.|++--..
T Consensus 267 d~v~~k~~~ 275 (377)
T 3my9_A 267 DAISVKIMK 275 (377)
T ss_dssp SEEECCHHH
T ss_pred CEEEecccc
Confidence 899886543
No 378
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=94.74 E-value=0.33 Score=42.29 Aligned_cols=110 Identities=19% Similarity=0.186 Sum_probs=67.6
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCC--CchHHHHHHHHHhcCCcEEEEEecCH
Q 018919 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL--GKMDEDVKWLQTITKLPILVKGVLTA 215 (349)
Q Consensus 138 ~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~--~~~~~~i~~i~~~~~~pv~vK~v~~~ 215 (349)
..+.++.+.+.|++.+.+...... +.. .. ....+.++.+.+.+++|+++.
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~--------------~~~---------~~~~~~~~~~l~~~~~~~~v~v~v~----- 84 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGD--------------ALT---------GEARIKFAEKAQAACREAGVPFIVN----- 84 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTT--------------CCC---------HHHHHHHHHHHHHHHHHHTCCEEEE-----
T ss_pred HHHHHHHHHHCCCCEEEEecCCCC--------------HhH---------HHHHHHHHHHHHHHHHHcCCeEEEc-----
Confidence 567788889999999876532110 000 00 011344555555668999874
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
+.++.+.++|+|+|.+... + . . +.++++.++. .++. -.+.+.+++.++...|||.|.+|.
T Consensus 85 ~~~~~a~~~gad~v~l~~~-----~--~-~---~~~~~~~~g~--~~~~-~s~~t~~e~~~a~~~g~d~v~~~~ 144 (227)
T 2tps_A 85 DDVELALNLKADGIHIGQE-----D--A-N---AKEVRAAIGD--MILG-VSAHTMSEVKQAEEDGADYVGLGP 144 (227)
T ss_dssp SCHHHHHHHTCSEEEECTT-----S--S-C---HHHHHHHHTT--SEEE-EEECSHHHHHHHHHHTCSEEEECC
T ss_pred CHHHHHHHcCCCEEEECCC-----c--c-C---HHHHHHhcCC--cEEE-EecCCHHHHHHHHhCCCCEEEECC
Confidence 3456788999999987211 1 1 1 3344444422 2222 225889998888899999999865
No 379
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=94.74 E-value=0.076 Score=49.25 Aligned_cols=89 Identities=19% Similarity=0.345 Sum_probs=55.8
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.=|=.+-.++++ |-++|||+|++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 118 (306)
T 1o5k_A 39 VRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYY 118 (306)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45678899999999665432111 111123455556666667899987666656666654 3348999999999987
Q ss_pred HHHhhcCHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEM 309 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~ 309 (349)
+. -.++++.++++.
T Consensus 119 ~~---~s~~~l~~~f~~ 132 (306)
T 1o5k_A 119 NK---PTQEGLYQHYKY 132 (306)
T ss_dssp SC---CCHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHH
Confidence 53 134554444443
No 380
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.73 E-value=0.11 Score=47.93 Aligned_cols=109 Identities=16% Similarity=0.040 Sum_probs=63.2
Q ss_pred CceEEEEeecCChhHHHHHHHHHHHcC-CCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCC-CCCchHHHHHHHH
Q 018919 123 GIRFFQLYVYKDRNVVAQLVRRAERAG-FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-DLGKMDEDVKWLQ 200 (349)
Q Consensus 123 ~~~~~Ql~~~~~~~~~~~~~~~~~~~G-~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~-~~~~~~~~i~~i~ 200 (349)
.+.++.+....+.+...+.++.++++| +++|.++-.. ..+......+.....+.........+. ..+..++.+++++
T Consensus 161 ~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~-~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~ 239 (314)
T 2e6f_A 161 LPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSV-GNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFY 239 (314)
T ss_dssp SCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCE-EEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCC-CccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHH
Confidence 457777766556666777889999999 9998764211 000000000000000000000000000 0011168899999
Q ss_pred Hhc-CCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 201 TIT-KLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 201 ~~~-~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
+.+ ++||+.-+ +.+++++.+++.+|||+|.+.
T Consensus 240 ~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 240 RRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp HHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred HhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 998 89987544 688999999999999999884
No 381
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.72 E-value=0.092 Score=48.73 Aligned_cols=94 Identities=10% Similarity=0.074 Sum_probs=57.7
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.-|=.+-.++++ +-++|||++++-.|++
T Consensus 41 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 120 (307)
T 3s5o_A 41 LHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCY 120 (307)
T ss_dssp HHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCT
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCc
Confidence 34567899999999765441110 111123455556666667899988666556666653 3458999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+.. .-.++++.++++.+.+
T Consensus 121 ~~~-~~s~~~l~~~f~~ia~ 139 (307)
T 3s5o_A 121 YRG-RMSSAALIHHYTKVAD 139 (307)
T ss_dssp TGG-GCCHHHHHHHHHHHHH
T ss_pred CCC-CCCHHHHHHHHHHHHh
Confidence 631 0135566555555433
No 382
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=94.72 E-value=0.089 Score=48.64 Aligned_cols=91 Identities=14% Similarity=0.241 Sum_probs=58.6
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPV 291 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~-~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~ 291 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++ ++|||+.-|=.+-.++++ +-.+|||+|++-.|+
T Consensus 34 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 113 (301)
T 3m5v_A 34 IKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPY 113 (301)
T ss_dssp HHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 45677899999998665442110 111223556666677777 899998766666677664 334899999999998
Q ss_pred HHHHhhcCHHHHHHHHHHHH
Q 018919 292 VYSLAAEGEKGVRRVLEMLR 311 (349)
Q Consensus 292 l~~~~~~G~~gv~~~l~~l~ 311 (349)
++. -.++++.++++.+.
T Consensus 114 y~~---~s~~~l~~~f~~va 130 (301)
T 3m5v_A 114 YNK---PTQQGLYEHYKAIA 130 (301)
T ss_dssp SSC---CCHHHHHHHHHHHH
T ss_pred CCC---CCHHHHHHHHHHHH
Confidence 763 23455555444443
No 383
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=94.72 E-value=0.1 Score=51.60 Aligned_cols=232 Identities=20% Similarity=0.254 Sum_probs=110.5
Q ss_pred hhccccccccccc-CCCCCCCcceeEc-CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH
Q 018919 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (349)
Q Consensus 41 ~~~~~~~l~p~~l-~~~~~~d~s~~l~-g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~ 118 (349)
.+||+|.|+|..- .+..++|+++++. ++.+..|++.++|...+ +..+|.+..+.|...++. ...++++.+
T Consensus 17 ~~~~dvll~p~~s~~~p~~v~~~~eLt~~~~l~iP~is~~m~~v~------~~~lA~al~~~GglG~i~--~~~~~e~~~ 88 (494)
T 1vrd_A 17 LTFDDVLLVPQYSEVLPKDVKIDTRLTRQIRINIPLVSAAMDTVT------EAALAKALAREGGIGIIH--KNLTPDEQA 88 (494)
T ss_dssp CCGGGEEECCCCCCCCGGGSCCCEESSSSCEESSSEEECCCTTTC------SHHHHHHHHTTTCEEEEC--SSSCHHHHH
T ss_pred cccccEEeccccccCCCCceEEEehhhCCCccCceeEecchHHHh------HHHHHHHHHHcCCceEEe--cCCChHHHH
Confidence 4799999998754 2445899999985 57888999999997643 457888888888877664 234555532
Q ss_pred h----hC--CCceEEEEeecCCh-hHHHHHHHHHHHcCCCEEEEecCC--CCCC-chhHHhhh----------hcC----
Q 018919 119 S----TG--PGIRFFQLYVYKDR-NVVAQLVRRAERAGFKAIALTVDT--PRLG-RREADIKN----------RFT---- 174 (349)
Q Consensus 119 ~----~~--~~~~~~Ql~~~~~~-~~~~~~~~~~~~~G~~~i~i~~d~--p~~g-~r~~d~~~----------~~~---- 174 (349)
+ .. .....-+... -++ ....+.++.+.+.+...+.+ +|. -..| ...+|++. -+.
T Consensus 89 ~~v~~v~~~~~iM~~~~~~-v~~~~tv~ea~~~m~~~~~~~~pV-vd~~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~~ 166 (494)
T 1vrd_A 89 RQVSIVKKTENGIIYDPIT-VTPDMTVKEAIDLMAEYKIGGLPV-VDEEGRLVGLLTNRDVRFEKNLSKKIKDLMTPREK 166 (494)
T ss_dssp HHHHHHHTC-----------------------------------------------------------------------
T ss_pred HHHHhhhhHhhcCccCCeE-ECCCCCHHHHHHHHHHcCceEEEE-EcCCCEEEEEEEHHHHHhhcCCCCcHHHHhCCCCC
Confidence 2 11 1100001111 111 12334444444444444322 110 0000 00111110 000
Q ss_pred ---CCCcCcccccCC-----------CCCC--ch------HHHHHHHHHh-----cCCcEEEEE-ecC----HHHHHHHH
Q 018919 175 ---LPPFLTLKNFQG-----------LDLG--KM------DEDVKWLQTI-----TKLPILVKG-VLT----AEDARIAV 222 (349)
Q Consensus 175 ---~p~~~~~~~~~~-----------~~~~--~~------~~~i~~i~~~-----~~~pv~vK~-v~~----~~~a~~a~ 222 (349)
+++......... ..|. .+ .+.++.+... .+.++.+.. +.. .+.++.+.
T Consensus 167 ~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~ 246 (494)
T 1vrd_A 167 LIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLV 246 (494)
T ss_dssp ------------------------------------------CHHHHTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHH
T ss_pred CeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccccccccchhhhccccccCcCHhHHHHHHHHH
Confidence 000000000000 0000 00 0112222211 111222222 222 57788999
Q ss_pred HcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 223 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 223 ~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
++|+|.|.++...| .....++.+.++++.++ ++||++ |++.+.+++.++..+|||+|.+|
T Consensus 247 ~aGvd~v~i~~~~G----~~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 247 KAGVDVIVIDTAHG----HSRRVIETLEMIKADYP-DLPVVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HTTCSEEEECCSCC----SSHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HhCCCEEEEEecCC----chHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 99999999954322 11335778888888764 588887 67899999999999999999994
No 384
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=94.67 E-value=0.18 Score=47.86 Aligned_cols=77 Identities=19% Similarity=0.135 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe-
Q 018919 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV- 212 (349)
Q Consensus 135 ~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v- 212 (349)
.+...++++.+++.|++.|.++....... ...| ..+.+ ++.++++|+.+++||++-+-
T Consensus 245 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~---------~~~~-----------~~~~~~~~~~~~ir~~~~iPVi~~GgI 304 (363)
T 3l5l_A 245 LEESIELARRFKAGGLDLLSVSVGFTIPD---------TNIP-----------WGPAFMGPIAERVRREAKLPVTSAWGF 304 (363)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSSC---------CCCC-----------CCTTTTHHHHHHHHHHHTCCEEECSST
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccc---------cccC-----------CCcchhHHHHHHHHHHcCCcEEEeCCC
Confidence 34566788899999999998876431100 0001 01223 77899999999999987664
Q ss_pred cCHHHHHHHHHcC-CCEEEE
Q 018919 213 LTAEDARIAVQAG-AAGIIV 231 (349)
Q Consensus 213 ~~~~~a~~a~~~G-~d~I~v 231 (349)
.++++|+.+++.| +|.|.+
T Consensus 305 ~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 305 GTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp TSHHHHHHHHHTTSCSEEEC
T ss_pred CCHHHHHHHHHCCCccEEEe
Confidence 5899999999999 999977
No 385
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=94.65 E-value=0.052 Score=50.65 Aligned_cols=92 Identities=18% Similarity=0.182 Sum_probs=60.1
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-..-.+.+..+++.+++++|||+.-|- +-.++++ +-.+|||+|++-.|++
T Consensus 39 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P~y 117 (316)
T 3e96_A 39 VDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMPIH 117 (316)
T ss_dssp HHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 34567899999998655331110 1111234566666667678999988774 7777765 3458999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLREE 313 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~e 313 (349)
+. -.++++.++++.+.+.
T Consensus 118 ~~---~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 118 PY---VTAGGVYAYFRDIIEA 135 (316)
T ss_dssp SC---CCHHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHHh
Confidence 42 2466666666666554
No 386
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=94.63 E-value=1.3 Score=42.39 Aligned_cols=117 Identities=14% Similarity=0.099 Sum_probs=84.7
Q ss_pred hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc--CCcEEEEEe
Q 018919 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT--KLPILVKGV 212 (349)
Q Consensus 135 ~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~--~~pv~vK~v 212 (349)
++.+.+.++++.+.|++++-+.++.. ...+.++.+|+.+ ++++.+..-
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~~~------------------------------~d~~~v~avR~a~G~~~~L~vDaN 213 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIKPG------------------------------WDVEPLQETRRAVGDHFPLWTDAN 213 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECBTT------------------------------BSHHHHHHHHHHHCTTSCEEEECT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCcc------------------------------hHHHHHHHHHHhcCCCCEEEEeCC
Confidence 67777788888888999998877310 0046788899887 578887632
Q ss_pred --cC---HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEEE
Q 018919 213 --LT---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIF 286 (349)
Q Consensus 213 --~~---~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V~ 286 (349)
-+ .+.++.+.+.|++.|- | ...+..++.+.++++.. .+||+++.-+.+..|+.++++.| +|.|+
T Consensus 214 ~~w~~~~~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~~~~d~v~ 283 (400)
T 3mwc_A 214 SSFELDQWETFKAMDAAKCLFHE-------Q-PLHYEALLDLKELGERI--ETPICLDESLISSRVAEFVAKLGISNIWN 283 (400)
T ss_dssp TCCCGGGHHHHHHHGGGCCSCEE-------S-CSCTTCHHHHHHHHHHS--SSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCCHHHHHHHHHHHhcCCCEEe-------C-CCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHhcCCCCEEE
Confidence 12 3456667778887763 1 11233577788888776 79999999999999999999976 79999
Q ss_pred EchHH
Q 018919 287 IGRPV 291 (349)
Q Consensus 287 ig~~~ 291 (349)
+--..
T Consensus 284 ~k~~~ 288 (400)
T 3mwc_A 284 IKIQR 288 (400)
T ss_dssp ECHHH
T ss_pred Ecchh
Confidence 86543
No 387
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=94.58 E-value=0.074 Score=48.95 Aligned_cols=91 Identities=18% Similarity=0.333 Sum_probs=55.8
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHH
Q 018919 217 DARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPV 291 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~ 291 (349)
.++.+.+.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.=|=.+-.++++ |-.+|||+|++-.|+
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 105 (292)
T 2vc6_A 26 LVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPY 105 (292)
T ss_dssp HHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 355678899999998655332110 111123455556666666899887655555566554 334899999999998
Q ss_pred HHHHhhcCHHHHHHHHHHH
Q 018919 292 VYSLAAEGEKGVRRVLEML 310 (349)
Q Consensus 292 l~~~~~~G~~gv~~~l~~l 310 (349)
++. -.++++.++++.+
T Consensus 106 y~~---~s~~~l~~~f~~i 121 (292)
T 2vc6_A 106 YNK---PTQEGIYQHFKAI 121 (292)
T ss_dssp SSC---CCHHHHHHHHHHH
T ss_pred CCC---CCHHHHHHHHHHH
Confidence 753 2345554444443
No 388
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.57 E-value=0.15 Score=47.53 Aligned_cols=93 Identities=14% Similarity=0.219 Sum_probs=56.1
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+.+++|||+.-|=.+-.++++ +-.+|||+|++-.|++
T Consensus 38 v~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 117 (318)
T 3qfe_A 38 YAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAY 117 (318)
T ss_dssp HHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 45577899999999765441110 111123455566666677899998666556666654 3348999999999976
Q ss_pred HHHhhcCHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLR 311 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~ 311 (349)
|.-- ..++++.++++.+.
T Consensus 118 ~~kp-~~~~~l~~~f~~ia 135 (318)
T 3qfe_A 118 FGKA-TTPPVIKSFFDDVS 135 (318)
T ss_dssp ---C-CCHHHHHHHHHHHH
T ss_pred cCCC-CCHHHHHHHHHHHH
Confidence 6300 12455555544443
No 389
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=94.51 E-value=0.43 Score=41.62 Aligned_cols=116 Identities=16% Similarity=0.023 Sum_probs=71.7
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcE--EE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPI--LV 209 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv--~v 209 (349)
+.+...+.++.+ +.|++.+++++.. .+ .+ .+.++++|+.+ +.|+ -+
T Consensus 17 ~~~~~~~~~~~~-~~~vd~ie~g~~~--------~~---------------------~~G~~~i~~lr~~~~~~~i~ld~ 66 (218)
T 3jr2_A 17 NLTDAVAVASNV-ASYVDVIEVGTIL--------AF---------------------AEGMKAVSTLRHNHPNHILVCDM 66 (218)
T ss_dssp SHHHHHHHHHHH-GGGCSEEEECHHH--------HH---------------------HHTTHHHHHHHHHCTTSEEEEEE
T ss_pred CHHHHHHHHHHh-cCCceEEEeCcHH--------HH---------------------hcCHHHHHHHHHhCCCCcEEEEE
Confidence 455556666664 4588988876410 00 01 36788998874 5555 45
Q ss_pred EEecCH-HHHHHHHHcCCCEEEEecCCCCCCCCchhhH-HHHHHHHHHhcCCCcEEE-ecCCCCHHHHHHHHHhCCCEEE
Q 018919 210 KGVLTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFL-DGGVRRGTDVFKALALGASGIF 286 (349)
Q Consensus 210 K~v~~~-~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~-~~l~~i~~~~~~~ipvia-~GGI~~~~dv~kal~~GA~~V~ 286 (349)
|....+ ..++.+.++|+|+|++...++ ...+ +.+..+.+ . .+..++ .=|+.|++++.++...|+|.+.
T Consensus 67 ~l~d~p~~~~~~~~~aGad~i~vh~~~~------~~~~~~~~~~~~~-~--g~~~~~d~l~~~T~~~~~~~~~~g~d~v~ 137 (218)
T 3jr2_A 67 KTTDGGAILSRMAFEAGADWITVSAAAH------IATIAACKKVADE-L--NGEIQIEIYGNWTMQDAKAWVDLGITQAI 137 (218)
T ss_dssp EECSCHHHHHHHHHHHTCSEEEEETTSC------HHHHHHHHHHHHH-H--TCEEEEECCSSCCHHHHHHHHHTTCCEEE
T ss_pred eecccHHHHHHHHHhcCCCEEEEecCCC------HHHHHHHHHHHHH-h--CCccceeeeecCCHHHHHHHHHcCcccee
Confidence 665444 357889999999999954321 2222 22333333 2 455554 4456788899888889999876
Q ss_pred Ec
Q 018919 287 IG 288 (349)
Q Consensus 287 ig 288 (349)
+.
T Consensus 138 ~~ 139 (218)
T 3jr2_A 138 YH 139 (218)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 390
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=94.50 E-value=0.1 Score=50.14 Aligned_cols=136 Identities=16% Similarity=0.048 Sum_probs=86.1
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCC-CCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDT-PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~-p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
+++...+.++++.+.|++++.+++.. ...|.. |..|. .+.....+.+. .+.++.+|+.+ +++|.+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~s~~----~g~~~~~~~~~~~e~v~avr~avG~d~~l~v 214 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSR-------EGVFL----EGPLPSETIKIGVERVEAIRNAVGPDVDIIV 214 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCC-------TTCCC----SSSCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccc-------ccCcc----cCCCchHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 67777788888889999999987520 000110 11111 00000001122 46688999877 578887
Q ss_pred EEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- .+.+++ +.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..++.++++.| +
T Consensus 215 Dan~~~~~~~ai~~~~~l~~~~i~~iE~--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~ 284 (403)
T 2ox4_A 215 ENHGHTDLVSAIQFAKAIEEFNIFFYEE--------INTPLNPRLLKEAKKKI--DIPLASGERIYSRWGFLPFLEDRSI 284 (403)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGCEEEEEC--------CSCTTSTHHHHHHHHTC--CSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ECCCCCCHHHHHHHHHHHHhhCCCEEeC--------CCChhhHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHHHcCCC
Confidence 642 345554 4455667665521 01223567777887776 79999999999999999999986 8
Q ss_pred CEEEEchH
Q 018919 283 SGIFIGRP 290 (349)
Q Consensus 283 ~~V~ig~~ 290 (349)
|.|++--.
T Consensus 285 d~v~ik~~ 292 (403)
T 2ox4_A 285 DVIQPDLG 292 (403)
T ss_dssp SEECCCHH
T ss_pred CEEecCcc
Confidence 99998643
No 391
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=94.49 E-value=0.37 Score=45.70 Aligned_cols=114 Identities=25% Similarity=0.306 Sum_probs=80.2
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKG 211 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~ 211 (349)
+++.+.+.++++.+.|++.+-++++ | +. .+.++.+|+.+ ++++.+..
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~~-~------------------------------~~d~~~v~avr~a~~~~~l~vDa 196 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKIK-P------------------------------GWDVQPVRATREAFPDIRLTVDA 196 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECB-T------------------------------TBSHHHHHHHHHHCTTSCEEEEC
T ss_pred CHHHHHHHHHHHHHhcccEEEEecC-h------------------------------HHHHHHHHHHHHHcCCCeEEEeC
Confidence 6677777888888899999988763 1 11 46688888776 67787763
Q ss_pred e--cCH---HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEE
Q 018919 212 V--LTA---EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGI 285 (349)
Q Consensus 212 v--~~~---~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V 285 (349)
- -+. +.++.+.+.|++.|- +. ..+..++.+.++++.+ ++||+++..+.+..|+.+++..| +|.|
T Consensus 197 n~~~~~~~~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~v 266 (375)
T 1r0m_A 197 NSAYTLADAGRLRQLDEYDLTYIE-------QP-LAWDDLVDHAELARRI--RTPLCLDESVASASDARKALALGAGGVI 266 (375)
T ss_dssp TTCCCGGGHHHHHTTGGGCCSCEE-------CC-SCTTCSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHHTSCSEE
T ss_pred CCCCCHHHHHHHHHHHhCCCcEEE-------CC-CCcccHHHHHHHHHhC--CCCEEecCccCCHHHHHHHHHhCCCCEE
Confidence 1 122 334444566777663 10 1123466777777776 79999999999999999999987 8999
Q ss_pred EEc
Q 018919 286 FIG 288 (349)
Q Consensus 286 ~ig 288 (349)
++-
T Consensus 267 ~ik 269 (375)
T 1r0m_A 267 NLK 269 (375)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 392
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=94.47 E-value=0.15 Score=47.35 Aligned_cols=86 Identities=23% Similarity=0.355 Sum_probs=55.8
Q ss_pred CCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHH
Q 018919 122 PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQT 201 (349)
Q Consensus 122 ~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~ 201 (349)
+.+.++.+-...+.+...+.+++++++|+++|.++-.... ..+. .+..|+.++++++
T Consensus 126 ~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~---------~~~~--------------~~~~~~~i~~i~~ 182 (318)
T 1vhn_A 126 SGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVV---------QSFT--------------GRAEWKALSVLEK 182 (318)
T ss_dssp SSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTT---------TTTS--------------SCCCGGGGGGSCC
T ss_pred CCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCcc---------ccCC--------------CCcCHHHHHHHHc
Confidence 3445555533223232348899999999999988643210 0010 0111566777776
Q ss_pred hcCCcEEEEE-ecCHHHHHHHHH-cCCCEEEEe
Q 018919 202 ITKLPILVKG-VLTAEDARIAVQ-AGAAGIIVS 232 (349)
Q Consensus 202 ~~~~pv~vK~-v~~~~~a~~a~~-~G~d~I~v~ 232 (349)
++||++-+ +.+++++.++++ .|||+|.+.
T Consensus 183 --~ipVi~~GgI~s~~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 183 --RIPTFVSGDIFTPEDAKRALEESGCDGLLVA 213 (318)
T ss_dssp --SSCEEEESSCCSHHHHHHHHHHHCCSEEEES
T ss_pred --CCeEEEECCcCCHHHHHHHHHcCCCCEEEEC
Confidence 89988755 579999999998 799999883
No 393
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=94.47 E-value=0.17 Score=46.24 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=36.7
Q ss_pred HHHHHHHHHhc--CCcEEEEE-ecCHHHHHHHHHcCCCEEEEec
Q 018919 193 DEDVKWLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 193 ~~~i~~i~~~~--~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
.+.++++++.+ ++||++.+ +.++++++.+.++|||+|++.+
T Consensus 214 ~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGS 257 (286)
T 3vk5_A 214 PEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAG 257 (286)
T ss_dssp HHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESG
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECc
Confidence 47899999998 89999885 7899999999999999999954
No 394
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=94.46 E-value=0.096 Score=49.65 Aligned_cols=101 Identities=19% Similarity=0.063 Sum_probs=62.0
Q ss_pred CCCceEEEEeecCChhHHHHHHHHHHHcC-CCEEEEe--------cC--CCCCCchhHHhhhhcCCCCcCcccccCCCCC
Q 018919 121 GPGIRFFQLYVYKDRNVVAQLVRRAERAG-FKAIALT--------VD--TPRLGRREADIKNRFTLPPFLTLKNFQGLDL 189 (349)
Q Consensus 121 ~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G-~~~i~i~--------~d--~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~ 189 (349)
...|.++.+-...+.+.+.+.++.++++| +++|.++ +| ....-.+.+....+++ +---
T Consensus 192 ~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlS-----------G~~i 260 (354)
T 4ef8_A 192 YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLG-----------GRYV 260 (354)
T ss_dssp CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEE-----------GGGG
T ss_pred hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCC-----------CCCC
Confidence 34577888866556556667777777887 9988642 11 1000000000000010 0000
Q ss_pred Cch-HHHHHHHHHhc-CCcEEE-EEecCHHHHHHHHHcCCCEEEEe
Q 018919 190 GKM-DEDVKWLQTIT-KLPILV-KGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 190 ~~~-~~~i~~i~~~~-~~pv~v-K~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
... |+.++++++.. ++||+. .++.+.+++.+++.+|||+|.+.
T Consensus 261 ~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 261 LPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEEC
T ss_pred chHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEh
Confidence 123 78899999886 699864 45789999999999999999984
No 395
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=94.46 E-value=0.41 Score=45.25 Aligned_cols=115 Identities=15% Similarity=0.176 Sum_probs=80.3
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKG 211 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~ 211 (349)
+++.+.+.++++.+.|++.+-++++ | +. .+.++.+|+.+ ++++.+-.
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~~-~------------------------------~~d~~~v~avr~a~~~~~l~vDa 189 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKIK-P------------------------------GWDYEVLKAVREAFPEATLTADA 189 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECB-T------------------------------TBSHHHHHHHHHHCTTSCEEEEC
T ss_pred CHHHHHHHHHHHHHhhhheeeeecC-h------------------------------hHHHHHHHHHHHHcCCCeEEEec
Confidence 6677777888888899999988763 1 11 46688888776 57777743
Q ss_pred e--cCH---HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEE
Q 018919 212 V--LTA---EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGI 285 (349)
Q Consensus 212 v--~~~---~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V 285 (349)
- -+. +.++.+.+.|++.|- +. ..+..++.+.++++.. ++||+++.-+.+..|+.+++..| +|.|
T Consensus 190 n~~~~~~~~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~v 259 (369)
T 2zc8_A 190 NSAYSLANLAQLKRLDELRLDYIE-------QP-LAYDDLLDHAKLQREL--STPICLDESLTGAEKARKAIELGAGRVF 259 (369)
T ss_dssp TTCCCGGGHHHHHGGGGGCCSCEE-------CC-SCTTCSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCCCHHHHHHHHHHHhCCCcEEE-------CC-CCcccHHHHHHHHhhC--CCCEEEcCccCCHHHHHHHHHhCCCCEE
Confidence 1 122 334445566776663 10 1123456677777766 79999999999999999999987 8999
Q ss_pred EEch
Q 018919 286 FIGR 289 (349)
Q Consensus 286 ~ig~ 289 (349)
++--
T Consensus 260 ~ik~ 263 (369)
T 2zc8_A 260 NVKP 263 (369)
T ss_dssp EECH
T ss_pred EEch
Confidence 9853
No 396
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=94.42 E-value=0.13 Score=51.15 Aligned_cols=234 Identities=13% Similarity=0.117 Sum_probs=133.0
Q ss_pred hhcccccccccccC-CCCCCCcceeEc-CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHHH
Q 018919 41 NAFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (349)
Q Consensus 41 ~~~~~~~l~p~~l~-~~~~~d~s~~l~-g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i~ 118 (349)
.+||++.|+|.... ..+++|++|.+- ++.+..|++.|||...+ +..||.+.++.|..+++.. +.++++..
T Consensus 35 ~t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtvT------e~~lAia~a~~GgiGvIh~--~~~~~~q~ 106 (511)
T 3usb_A 35 LTFDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTVT------EADMAIAMARQGGLGIIHK--NMSIEQQA 106 (511)
T ss_dssp CCGGGEEECCCCCCCCTTTSBCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHH
T ss_pred cceEEEEEECCcccccccceEeeeEeecccccCCCccccCchhhc------HHHHHHHHHhcCCceeecc--cCCHHHHH
Confidence 46999999998643 346799999886 57889999999997654 6689999888888888853 34554422
Q ss_pred ----hhC-C-CceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCC-C--CCC-chhHHhhhhcC---------CC-Cc
Q 018919 119 ----STG-P-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT-P--RLG-RREADIKNRFT---------LP-PF 178 (349)
Q Consensus 119 ----~~~-~-~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~-p--~~g-~r~~d~~~~~~---------~p-~~ 178 (349)
+.. . .......+.-.......+.++.+.+.++..+.+.=+. . ..| ...+|++.... .+ +-
T Consensus 107 ~~V~~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~~~~~~V~~vM~~~~~ 186 (511)
T 3usb_A 107 EQVDKVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQDYSIKISDVMTKEQL 186 (511)
T ss_dssp HHHHHHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCCCSSSBHHHHCCCCCC
T ss_pred HHHHHhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhccCCCcHHHhcccCCC
Confidence 211 1 1000011111122335567777788888888664220 0 001 12344432100 00 00
Q ss_pred CcccccCC-----------------CCCC--c----h-H-HHHHHHHHh-------cCCcEEEEEec---CHHHHHHHHH
Q 018919 179 LTLKNFQG-----------------LDLG--K----M-D-EDVKWLQTI-------TKLPILVKGVL---TAEDARIAVQ 223 (349)
Q Consensus 179 ~~~~~~~~-----------------~~~~--~----~-~-~~i~~i~~~-------~~~pv~vK~v~---~~~~a~~a~~ 223 (349)
++.+.... ..|. . . . +.++.+... ..+++.+..-. ..+.++.+.+
T Consensus 187 vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLve 266 (511)
T 3usb_A 187 ITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVK 266 (511)
T ss_dssp CCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHh
Confidence 00000000 0010 0 0 1 122222210 01222222221 2467888999
Q ss_pred cCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 224 AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 224 ~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
+|+|.|++....+ .....++.+.++++..+ ++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 267 aGvd~I~Id~a~g----~~~~v~~~i~~i~~~~~-~~~vi~-g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 267 ASVDAIVLDTAHG----HSQGVIDKVKEVRAKYP-SLNIIA-GNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp TTCSEEEEECSCT----TSHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred hccceEEeccccc----chhhhhhHHHHHHHhCC-CceEEe-eeeccHHHHHHHHHhCCCEEEEC
Confidence 9999999964322 12335677888877663 577774 77999999999999999999874
No 397
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=94.40 E-value=0.21 Score=48.24 Aligned_cols=131 Identities=17% Similarity=0.169 Sum_probs=87.4
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++++-+.+..+..+. .+. .+. ..+.+. .+.++.+|+.+ +.+|.+
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~------~g~-~~~---------~~~~~~d~~~v~avR~a~G~d~~l~v 206 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAY------SGH-QLS---------LEVLDRCELFCRRVREAVGSKADLLF 206 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTT------CCB-CCC---------HHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccc------ccc-ccc---------hhhHHHHHHHHHHHHHHhCCCCeEEE
Confidence 36777777788888899999988776542110 000 000 001122 46688999887 578887
Q ss_pred EEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- -+.++| +.+.+.|++.|-= ...+..++.+.++++.+ ++||+++..+.+..|+.++++.| +
T Consensus 207 DaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~ 276 (412)
T 4e4u_A 207 GTHGQMVPSSAIRLAKRLEKYDPLWFEE--------PVPPGQEEAIAQVAKHT--SIPIATGERLTTKYEFHKLLQAGGA 276 (412)
T ss_dssp CCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCSSCHHHHHHHHHTC--SSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ECCCCCCHHHHHHHHHHhhhcCCcEEEC--------CCChhhHHHHHHHHhhC--CCCEEecCccCCHHHHHHHHHcCCC
Confidence 542 345554 5566788887741 01123567788887766 79999999999999999999987 7
Q ss_pred CEEEEch
Q 018919 283 SGIFIGR 289 (349)
Q Consensus 283 ~~V~ig~ 289 (349)
|.|++--
T Consensus 277 d~v~~d~ 283 (412)
T 4e4u_A 277 SILQLNV 283 (412)
T ss_dssp SEECCCT
T ss_pred CEEEeCc
Confidence 9998853
No 398
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.37 E-value=0.08 Score=49.32 Aligned_cols=91 Identities=18% Similarity=0.199 Sum_probs=56.8
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.=|= +-.++++ |-++|||+|++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~~P~y 117 (314)
T 3d0c_A 39 VEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIHQPVH 117 (314)
T ss_dssp HHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 34567899999988654331110 1111234556666666678999865554 5566654 3347999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~ 312 (349)
+. -.++++.++++.+.+
T Consensus 118 ~~---~s~~~l~~~f~~va~ 134 (314)
T 3d0c_A 118 PY---ITDAGAVEYYRNIIE 134 (314)
T ss_dssp SC---CCHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHH
Confidence 63 245666666555544
No 399
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=94.36 E-value=0.1 Score=47.26 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=33.8
Q ss_pred HHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEec
Q 018919 193 DEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
.+.++++|+.+++||.+.. +.+++++.. +..|||+++|.+
T Consensus 195 ~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGS 235 (262)
T 2ekc_A 195 KKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGS 235 (262)
T ss_dssp HHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECH
T ss_pred HHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECH
Confidence 4679999998899998876 456999999 788999999953
No 400
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=94.32 E-value=0.2 Score=48.16 Aligned_cols=138 Identities=14% Similarity=-0.060 Sum_probs=87.3
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCC----Cch-HHHHHHHHHhc--CC
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL----GKM-DEDVKWLQTIT--KL 205 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~----~~~-~~~i~~i~~~~--~~ 205 (349)
.+++.+.+.++++.+.|+.++-+.++..... .+. ...|++.. +. ...+ .+. .+.++.+|+.+ +.
T Consensus 132 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~---~~~---~~~~~~~~-~g--~~~~~~~~~~~d~~~v~avR~a~G~d~ 202 (401)
T 3sbf_A 132 DTMEGIYDLVEGFLEKGYKHIRCQLGFYGGV---PTD---LHTTQNPT-EG--SYYDQDQYMDNTLTMFKSLREKYGNQF 202 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEESCCCSC---GGG---SCCCSSCC-SS--EECCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcc---ccc---cccccccc-cc--ccccchHHHHHHHHHHHHHHHHcCCCC
Confidence 5778888888888889999999888653110 000 00000000 00 0011 122 46688999987 57
Q ss_pred cEEEEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 018919 206 PILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 279 (349)
Q Consensus 206 pv~vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~ 279 (349)
+|.+..- -+.++| +.+.+.|++.|-=- ..+..++.+.++++.+ .+||++++.+.+..|+.++++
T Consensus 203 ~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP--------~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 272 (401)
T 3sbf_A 203 HILHDVHERLFPNQAIQFAKEVEQYKPYFIEDI--------LPPNQTEWLDNIRSQS--SVSLGLGELFNNPEEWKSLIA 272 (401)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSCEECS--------SCTTCGGGHHHHHTTC--CCCEEECTTCCSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CChhHHHHHHHHHhhC--CCCEEeCCccCCHHHHHHHHh
Confidence 8887643 345554 55666788776310 1122355566776655 799999999999999999999
Q ss_pred hC-CCEEEEch
Q 018919 280 LG-ASGIFIGR 289 (349)
Q Consensus 280 ~G-A~~V~ig~ 289 (349)
.| +|.|++--
T Consensus 273 ~~~~d~v~~k~ 283 (401)
T 3sbf_A 273 NRRIDFIRCHV 283 (401)
T ss_dssp TTCCSEECCCG
T ss_pred cCCCCEEecCc
Confidence 86 79998864
No 401
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.30 E-value=0.2 Score=46.60 Aligned_cols=81 Identities=21% Similarity=0.235 Sum_probs=60.6
Q ss_pred HHHHHHHHHhcCCcEEEEEecC--------HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEE
Q 018919 193 DEDVKWLQTITKLPILVKGVLT--------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 264 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~--------~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia 264 (349)
.+.++++++.++.|+.+....+ .+.++.+.++|+|+|.++ ++. | .+.+..+++. .++++.
T Consensus 56 ~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~--~g~-----p--~~~~~~l~~~---gi~vi~ 123 (328)
T 2gjl_A 56 AAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETA--GND-----P--GEHIAEFRRH---GVKVIH 123 (328)
T ss_dssp HHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEE--ESC-----C--HHHHHHHHHT---TCEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEc--CCC-----c--HHHHHHHHHc---CCCEEe
Confidence 4568888888888887776654 367888999999999884 221 1 3445554442 578884
Q ss_pred ecCCCCHHHHHHHHHhCCCEEEE
Q 018919 265 DGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 265 ~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+.+.+++.++...|||++.+
T Consensus 124 --~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 124 --KCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp --EESSHHHHHHHHHTTCSEEEE
T ss_pred --eCCCHHHHHHHHHcCCCEEEE
Confidence 489999999999999999998
No 402
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=94.30 E-value=0.34 Score=42.71 Aligned_cols=81 Identities=21% Similarity=0.262 Sum_probs=55.2
Q ss_pred ceEEEEe---ecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHH
Q 018919 124 IRFFQLY---VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWL 199 (349)
Q Consensus 124 ~~~~Ql~---~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i 199 (349)
+.++.+. ..-+.+...+.++.++++|+++|. .++. +. .... |+.++.+
T Consensus 117 pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~--tstg------------~~--------------~gga~~~~i~~v 168 (225)
T 1mzh_A 117 SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIK--TSTG------------FA--------------PRGTTLEEVRLI 168 (225)
T ss_dssp TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEE--CCCS------------CS--------------SSCCCHHHHHHH
T ss_pred CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEE--ECCC------------CC--------------CCCCCHHHHHHH
Confidence 4566662 223455577888899999999983 3321 10 0112 7888888
Q ss_pred HHhc--CCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 200 QTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 200 ~~~~--~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++.+ ++||+.=+ +.+.+++...+++|||.|-++
T Consensus 169 ~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s 204 (225)
T 1mzh_A 169 KSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTS 204 (225)
T ss_dssp HHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHc
Confidence 8877 68875443 689999999999999976553
No 403
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=94.29 E-value=0.074 Score=47.44 Aligned_cols=77 Identities=23% Similarity=0.343 Sum_probs=49.4
Q ss_pred HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHH----------HHHHHHhCCCEEEEc
Q 018919 219 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGIFIG 288 (349)
Q Consensus 219 ~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d----------v~kal~~GA~~V~ig 288 (349)
+.+.+.|.++++.+. +.+.++++.++ ..+++.+|||+-... ..+++..|||.+.+|
T Consensus 149 ~~~~~~G~~g~v~~~-------------~~i~~lr~~~~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvG 214 (239)
T 1dbt_A 149 KQAEESGLDGVVCSV-------------HEAKAIYQAVS-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVG 214 (239)
T ss_dssp HHHHHTTCSEEECCG-------------GGHHHHTTTSC-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEEC
T ss_pred HHHHHhCCCEEEECH-------------HHHHHHHHhcC-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEC
Confidence 335667888865531 22344444443 468999999986543 367889999999999
Q ss_pred hHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018919 289 RPVVYSLAAEGEKGVRRVLEMLREEFE 315 (349)
Q Consensus 289 ~~~l~~~~~~G~~gv~~~l~~l~~el~ 315 (349)
|+++.+ .. ..+.++.+++++.
T Consensus 215 r~I~~a---~d---p~~a~~~l~~~i~ 235 (239)
T 1dbt_A 215 RSITKA---ED---PVKAYKAVRLEWE 235 (239)
T ss_dssp HHHHTS---SC---HHHHHHHHHHHHH
T ss_pred hhhcCC---CC---HHHHHHHHHHHHH
Confidence 998742 11 3345555555543
No 404
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.28 E-value=0.13 Score=47.84 Aligned_cols=90 Identities=14% Similarity=0.240 Sum_probs=57.2
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCC-CEEEEchHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGA-SGIFIGRPV 291 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA-~~V~ig~~~ 291 (349)
++.+++.|+|+|.+.++.|-... +-....+.+..+++.+++++|||+.-|=.+-.++++ +-.+|| |+|++-.|+
T Consensus 34 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~ 113 (311)
T 3h5d_A 34 IEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPY 113 (311)
T ss_dssp HHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCC
Confidence 45577899999999765442110 111123455666666667899998777666777764 334697 999999998
Q ss_pred HHHHhhcCHHHHHHHHHHH
Q 018919 292 VYSLAAEGEKGVRRVLEML 310 (349)
Q Consensus 292 l~~~~~~G~~gv~~~l~~l 310 (349)
++. -.++++.++++.+
T Consensus 114 y~~---~s~~~l~~~f~~v 129 (311)
T 3h5d_A 114 YNK---PSQEGMYQHFKAI 129 (311)
T ss_dssp SSC---CCHHHHHHHHHHH
T ss_pred CCC---CCHHHHHHHHHHH
Confidence 763 2345554444443
No 405
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1
Probab=94.28 E-value=2.8 Score=39.04 Aligned_cols=144 Identities=14% Similarity=0.156 Sum_probs=90.9
Q ss_pred CCCceEEEEee--cCChhHHHHHHHHHHHc----CCC--EEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch
Q 018919 121 GPGIRFFQLYV--YKDRNVVAQLVRRAERA----GFK--AIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM 192 (349)
Q Consensus 121 ~~~~~~~Ql~~--~~~~~~~~~~~~~~~~~----G~~--~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~ 192 (349)
.+++..+|+.. ..|.+.+.+.++++.+. |.+ -+.|.+.++.. |
T Consensus 97 v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T~e---------------G-------------- 147 (329)
T 3m16_A 97 IPGVISTEVDARLSFDTQATVAKARKLIRLYQDAGIDSDRILIKIASTWE---------------G-------------- 147 (329)
T ss_dssp CSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHH---------------H--------------
T ss_pred CCCcEEEEECCcccCCHHHHHHHHHHHHHhhhhhCCCCCcEEEEeCCCHH---------------H--------------
Confidence 45777778754 24666666666665543 544 45665533200 0
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEec----------CCCCCCC-CchhhHHHHHHHHHHhc--CC
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN----------HGARQLD-YVPATIMALEEVVKATQ--GR 259 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~----------~gg~~~~-~~~~~~~~l~~i~~~~~--~~ 259 (349)
.+.++.+.+. ++++-+-.+.+...+..|.++|+..|...- .|+.... .+.+....+.++.+..+ +-
T Consensus 148 l~A~~~L~~~-GI~~N~TliFS~~Qa~aaA~AGa~~ISPFVgRidd~~~~~~~~~~~~~~~~~Gv~~v~~i~~~y~~~g~ 226 (329)
T 3m16_A 148 IQAAKILEAE-GIHCNLTLLFHFAQAQACAEAGTTLISPFVGRILDWYKANSGQSEYSASEDPGVVSVTEIYNFYKSHGF 226 (329)
T ss_dssp HHHHHHHHHT-TCCEEEEEECSHHHHHHHHHTTCSEEEEBHHHHHHHHHTTSSCCCCCTTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHcCCcEEEeehhHHHHHhhhcccccccccccCcHHHHHHHHHHHHHHcCC
Confidence 3456666544 899999999999999999999999887641 1211110 11234555556655442 22
Q ss_pred CcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHh
Q 018919 260 IPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 296 (349)
Q Consensus 260 ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~ 296 (349)
-+.+..-.+|+..++.. .+|||.+-|.-.++..+.
T Consensus 227 ~T~v~~ASfRn~~~V~a--LaG~d~vTipp~~l~~l~ 261 (329)
T 3m16_A 227 KTIVMGASFRNTGEIEE--LAGCDRLTISPELLAQLE 261 (329)
T ss_dssp CCEEEEBCCSCHHHHHT--TTTSSEEEECHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHH--hhCCCEEECCHHHHHHHH
Confidence 34455556999999984 469999999988887664
No 406
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=94.26 E-value=0.17 Score=48.77 Aligned_cols=130 Identities=18% Similarity=0.156 Sum_probs=84.9
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCC----Cch-HHHHHHHHHhc--CCc
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL----GKM-DEDVKWLQTIT--KLP 206 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~----~~~-~~~i~~i~~~~--~~p 206 (349)
+++...+.++++.+.|++++.+++..+. |.. ..| .. +-.+ .+. .+.++.+|+.+ +++
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~-G~~--------~~~------~~-G~~~~~~~~~~~~e~v~avRea~G~d~~ 212 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDIT-GPL--------HRD------FW-NGAISPREHEAMVARVAAVREAVGPEVE 212 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSS-STT--------CSC------SS-SCCCCHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccC-Ccc--------cCC------cC-ccccchhhHHHHHHHHHHHHHhcCCCCE
Confidence 4566667778888899999998872110 100 000 00 0011 123 56789999887 578
Q ss_pred EEEEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh
Q 018919 207 ILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 280 (349)
Q Consensus 207 v~vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~ 280 (349)
|.+..- .+.+++ +.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.+..++.++++.
T Consensus 213 l~vDan~~~~~~~a~~~~~~l~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 282 (410)
T 2qq6_A 213 VAIDMHGRFDIPSSIRFARAMEPFGLLWLEE--------PTPPENLDALAEVRRST--STPICAGENVYTRFDFRELFAK 282 (410)
T ss_dssp EEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhhcCCCeEEC--------CCChhhHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHc
Confidence 877642 355554 4566678887631 01223577777777665 7999999999999999999998
Q ss_pred C-CCEEEEch
Q 018919 281 G-ASGIFIGR 289 (349)
Q Consensus 281 G-A~~V~ig~ 289 (349)
| +|.|++--
T Consensus 283 ~~~d~v~ik~ 292 (410)
T 2qq6_A 283 RAVDYVMPDV 292 (410)
T ss_dssp TCCSEECCBH
T ss_pred CCCCEEecCc
Confidence 6 89998853
No 407
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=94.24 E-value=0.82 Score=43.63 Aligned_cols=118 Identities=14% Similarity=0.055 Sum_probs=83.3
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEE-
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPIL- 208 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~- 208 (349)
.+++.+.+.++++.+.|++.+-+.+++. ++. .+.++.+|+.+ +.++.
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~-----------------------------~~~d~~~v~avR~a~g~~~~l~~ 191 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKN-----------------------------LDADEEFLSRVKEEFGSRVRIKS 191 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSC-----------------------------HHHHHHHHHHHHHHHGGGCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCC-----------------------------HHHHHHHHHHHHHHcCCCCcEEE
Confidence 3566677777788889999998887541 112 46788888886 57787
Q ss_pred EEEe--cCHHHH----HHHHHcCC--CEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHh
Q 018919 209 VKGV--LTAEDA----RIAVQAGA--AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 280 (349)
Q Consensus 209 vK~v--~~~~~a----~~a~~~G~--d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~ 280 (349)
+..- -+.++| +.+.+.|+ +.|- + ...+..++.+.++++.+ .+|| +..+.+..|+.++++.
T Consensus 192 vDan~~~~~~~A~~~~~~l~~~~i~~~~iE-------q-P~~~~d~~~~~~l~~~~--~iPI--dE~~~~~~~~~~~~~~ 259 (391)
T 3gd6_A 192 YDFSHLLNWKDAHRAIKRLTKYDLGLEMIE-------S-PAPRNDFDGLYQLRLKT--DYPI--SEHVWSFKQQQEMIKK 259 (391)
T ss_dssp EECTTCSCHHHHHHHHHHHTTCCSSCCEEE-------C-CSCTTCHHHHHHHHHHC--SSCE--EEECCCHHHHHHHHHH
T ss_pred ecCCCCcCHHHHHHHHHHHHhcCCCcceec-------C-CCChhhHHHHHHHHHHc--CCCc--CCCCCCHHHHHHHHHc
Confidence 6532 355554 45556777 5552 1 01223577788888876 7999 8899999999999997
Q ss_pred C-CCEEEEchHH
Q 018919 281 G-ASGIFIGRPV 291 (349)
Q Consensus 281 G-A~~V~ig~~~ 291 (349)
| +|.|++--..
T Consensus 260 ~~~d~v~~k~~~ 271 (391)
T 3gd6_A 260 DAIDIFNISPVF 271 (391)
T ss_dssp TCCSEEEECHHH
T ss_pred CCCCEEEECchh
Confidence 6 7999998654
No 408
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=94.21 E-value=0.47 Score=44.93 Aligned_cols=112 Identities=13% Similarity=0.006 Sum_probs=76.9
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEEEe--cC
Q 018919 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVKGV--LT 214 (349)
Q Consensus 140 ~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK~v--~~ 214 (349)
+..+.+++.|+..+-+.++.. +++. .+.++.+|+.+ +.++.+..- -+
T Consensus 149 ~~~~~~~~~G~~~~KiKvg~~----------------------------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~ 200 (370)
T 1chr_A 149 SAVEMIERRRHNRFKVKLGFR----------------------------SPQDDLIHMEALSNSLGSKAYLRVDVNQAWD 200 (370)
T ss_dssp HHHHHHHTTCCCEEEEECSSS----------------------------CSHHHHHHHHHHHHHSSTTCCEEEECTTCCC
T ss_pred HHHHHHHHCCCCEEEEecCCC----------------------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 333344447999988877531 1222 56789999987 478888642 23
Q ss_pred HHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEEEEch
Q 018919 215 AED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGR 289 (349)
Q Consensus 215 ~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V~ig~ 289 (349)
.++ ++.+.+.|++.|- | ...+..++.+.++++.. .+||+++.-+.+..|+.+++..| +|.|++--
T Consensus 201 ~~~a~~~~~~l~~~~i~~iE-------q-P~~~~~~~~~~~l~~~~--~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 201 EQVASVYIPELEALGVELIE-------Q-PVGRENTQALRRLSDNN--RVAIMADESLSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp TTHHHHHTHHHHTTTEEEEE-------C-CSCTTCHHHHHHHHHHS--CSEEEESSSCCSHHHHHHHHTTTSCSEEEECT
T ss_pred HHHHHHHHHHHHhcCCCEEE-------C-CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 333 4556667766652 1 11233567788888776 79999999999999999999975 89999864
No 409
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=94.19 E-value=2.7 Score=39.40 Aligned_cols=181 Identities=13% Similarity=0.148 Sum_probs=104.5
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--c---CCCCCCHHHHHh-----hCC-CceEEEEeecCChhHHHHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-----TGP-GIRFFQLYVYKDRNVVAQL 141 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~---~~~~~~~e~i~~-----~~~-~~~~~Ql~~~~~~~~~~~~ 141 (349)
|.++.|+.-.+-.+.+.-..+++-.-+.|+.+++ + ++...+.+|..+ ... .+.+...-. .+-....++
T Consensus 32 ~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~-~st~eai~l 110 (344)
T 2hmc_A 32 PALMTPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGA-VNTASAVAH 110 (344)
T ss_dssp EBCCCCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCC-SSHHHHHHH
T ss_pred EeeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHH
Confidence 5566776433323444445677777778876543 3 334456665322 112 345566533 455667788
Q ss_pred HHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHH-hcCCcEEEEEe------c
Q 018919 142 VRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQT-ITKLPILVKGV------L 213 (349)
Q Consensus 142 ~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~-~~~~pv~vK~v------~ 213 (349)
++.+++.|++++.+. .|.. .-|. +.+ ..+..+.+.+ .+++||++=.+ .
T Consensus 111 a~~A~~~Gadavlv~--~P~y-----------~~~~-----------s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l 166 (344)
T 2hmc_A 111 AVHAQKVGAKGLMVI--PRVL-----------SRGS-----------VIAAQKAHFKAILSAAPEIPAVIYNSPYYGFAT 166 (344)
T ss_dssp HHHHHHHTCSEEEEC--CCCS-----------SSTT-----------CHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCC
T ss_pred HHHHHhcCCCEEEEC--CCcc-----------CCCC-----------CHHHHHHHHHHHHhhCCCCcEEEEecCccCCCc
Confidence 999999999998763 2321 1000 111 2566778888 78999998665 3
Q ss_pred CHHHHHHH-HHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHH-HhCCCEEEEchH
Q 018919 214 TAEDARIA-VQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL-ALGASGIFIGRP 290 (349)
Q Consensus 214 ~~~~a~~a-~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal-~~GA~~V~ig~~ 290 (349)
+++...++ .+.. +-+|.-+ .+|.++..+.++.+..++++.|+ +|. ..-++.++ .+||++++-+.+
T Consensus 167 ~~e~~~~L~a~~pnIvGiKds--------sgp~d~~~~~~~~~~~~~~f~v~-~G~---D~~~l~~l~~~Ga~G~is~~a 234 (344)
T 2hmc_A 167 RADLFFALRAEHKNLVGFKEF--------GGPADMRYAAENITSRDDEVTLM-IGV---DTAVVHGFVNCGATGAITGIG 234 (344)
T ss_dssp CHHHHHHHHHHCTTEEEEEEC--------SCHHHHHHHHHHTSCSSSSCEEE-ECS---GGGHHHHHHHSCCCEEEESGG
T ss_pred CHHHHHHHHhcCCCEEEEEcC--------CCCCCHHHHHHHHHHcCCCEEEE-ECc---HHHHHHHHHHcCCCEEEeCHH
Confidence 56777776 5542 2233221 22224555555554443455554 332 23466788 899999999985
No 410
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=94.16 E-value=3.1 Score=38.97 Aligned_cols=144 Identities=10% Similarity=0.059 Sum_probs=91.5
Q ss_pred CCCceEEEEee--cCChhHHHHHHHHHHH----cCCC--EEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch
Q 018919 121 GPGIRFFQLYV--YKDRNVVAQLVRRAER----AGFK--AIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM 192 (349)
Q Consensus 121 ~~~~~~~Ql~~--~~~~~~~~~~~~~~~~----~G~~--~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~ 192 (349)
.+++..+|+.. ..|.+.+.+.++++.+ .|.+ -+.|-+.++.. |
T Consensus 116 v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T~e---------------G-------------- 166 (345)
T 3tkf_A 116 IEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIMIAATWE---------------G-------------- 166 (345)
T ss_dssp CSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHH---------------H--------------
T ss_pred CCCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhcCCCCCcEEEEeCCCHH---------------H--------------
Confidence 45777788764 2466666666666654 3544 45665533200 0
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEec----------CCCCCCC--CchhhHHHHHHHHHHh---c
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN----------HGARQLD--YVPATIMALEEVVKAT---Q 257 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~----------~gg~~~~--~~~~~~~~l~~i~~~~---~ 257 (349)
.+.++.+.+. ++++-+-.+.+.+.+..|.++|+..|...- .|..... ...+....+.++.+.. +
T Consensus 167 i~A~~~L~~e-GI~vN~TliFS~~Qa~~aAeAGa~~ISPFVGRidD~~~~~~~~~~~~~~~~~~Gv~~v~~i~~~yk~~g 245 (345)
T 3tkf_A 167 IKAAKLLQKE-GINCNLTLIFDKAQAKACAEAGVYLVSPFVGRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKLYKSHG 245 (345)
T ss_dssp HHHHHHHHHT-TCCEEEEEECCHHHHHHHHHTTCSEEEEBSHHHHHHHHHHTTCSSCCCGGGCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHcCCcEEEeecchHHHHhhhccccccccccccCCHHHHHHHHHHHHHHcC
Confidence 3456666655 999999999999999999999999987641 0111110 0123345555555543 2
Q ss_pred CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHhh
Q 018919 258 GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 297 (349)
Q Consensus 258 ~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~~ 297 (349)
.+.. +..-.+|+..++.. .+|||.+-|.-.++..+..
T Consensus 246 ~~T~-Vl~ASfRn~~~V~a--LaG~d~vTipp~lL~~L~~ 282 (345)
T 3tkf_A 246 FKTI-VMGASFRNVEQVIA--LAGCDALTISPVLLEELKN 282 (345)
T ss_dssp CCSE-EEEBCCSSHHHHHT--TTTSSEEEECHHHHHHHHT
T ss_pred CCCE-EEeCCCCCHHHHHH--HhCCCEEECCHHHHHHHHh
Confidence 2444 44555999999983 4699999999888877653
No 411
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.15 E-value=1.2 Score=40.33 Aligned_cols=72 Identities=18% Similarity=0.222 Sum_probs=53.0
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKG 211 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~ 211 (349)
.+.+...+.+++..+.|++.|.|+...+..- +.+. ...|+.+++.+++||.+ .
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~e-------------------------E~~rv~~vi~~l~~~~~~pisI-D 84 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGPTADD-------------------------PVRVMEWLVKTIQEVVDLPCCL-D 84 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCSCSSC-------------------------HHHHHHHHHHHHHHHCCCCEEE-E
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCchh-------------------------HHHHHHHHHHHHHHhCCCeEEE-e
Confidence 3556677788888899999999887653210 1111 35688888878999987 5
Q ss_pred ecCHHHHHHHHHc--CCCEEE
Q 018919 212 VLTAEDARIAVQA--GAAGII 230 (349)
Q Consensus 212 v~~~~~a~~a~~~--G~d~I~ 230 (349)
..+++.++.++++ |++.|-
T Consensus 85 T~~~~v~~aal~a~~Ga~iIN 105 (271)
T 2yci_X 85 STNPDAIEAGLKVHRGHAMIN 105 (271)
T ss_dssp CSCHHHHHHHHHHCCSCCEEE
T ss_pred CCCHHHHHHHHHhCCCCCEEE
Confidence 6688999999999 998875
No 412
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=94.07 E-value=0.59 Score=43.53 Aligned_cols=81 Identities=14% Similarity=0.160 Sum_probs=60.0
Q ss_pred HHHHHHHHHhcCCcEEEEEec-C---HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCC
Q 018919 193 DEDVKWLQTITKLPILVKGVL-T---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 268 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~-~---~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI 268 (349)
.+.++++++.++.|+.+.... + .+.++.+.+.|+|.|.++ ++. | .+.+..+++. .++|+. ++
T Consensus 66 ~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~--~g~-----p--~~~~~~l~~~---g~~v~~--~v 131 (326)
T 3bo9_A 66 RKAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFG--AGN-----P--TKYIRELKEN---GTKVIP--VV 131 (326)
T ss_dssp HHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEE--SSC-----C--HHHHHHHHHT---TCEEEE--EE
T ss_pred HHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEEC--CCC-----c--HHHHHHHHHc---CCcEEE--Ec
Confidence 456888888778899888764 2 366788999999999883 321 2 2344444432 577775 68
Q ss_pred CCHHHHHHHHHhCCCEEEE
Q 018919 269 RRGTDVFKALALGASGIFI 287 (349)
Q Consensus 269 ~~~~dv~kal~~GA~~V~i 287 (349)
.+.+++.++...|||+|.+
T Consensus 132 ~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 132 ASDSLARMVERAGADAVIA 150 (326)
T ss_dssp SSHHHHHHHHHTTCSCEEE
T ss_pred CCHHHHHHHHHcCCCEEEE
Confidence 9999999999999999998
No 413
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=94.05 E-value=0.26 Score=47.72 Aligned_cols=138 Identities=15% Similarity=-0.018 Sum_probs=88.0
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCC----Cch-HHHHHHHHHhc--CC
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL----GKM-DEDVKWLQTIT--KL 205 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~----~~~-~~~i~~i~~~~--~~ 205 (349)
.+++.+.+.++++.+.|+.++-+.++..... .+. ...|.+.. +. ...+ .+. .+.++.+|+.+ ++
T Consensus 153 ~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~---~~~---~~~~~~~~-~~--~~~~~~~~~~~d~e~v~avR~avG~d~ 223 (422)
T 3tji_A 153 ETLEALFASVDALIAQGYRHIRCQLGFYGGT---PSA---LHAPDNPT-PG--AWFDQQEYMSNTVEMFHALREKYGWKL 223 (422)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCBC---GGG---SCCCSSCC-SS--EECCHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcc---ccc---cccccccc-cc--ccccchhHHHHHHHHHHHHHHHcCCCC
Confidence 5677788888888889999999888653110 000 00000000 00 0011 122 46689999987 57
Q ss_pred cEEEEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 018919 206 PILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 279 (349)
Q Consensus 206 pv~vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~ 279 (349)
+|.+..- -+.++| +.+.+.|++.|-= ...+..++.+.++++.+ .+||++++.+.+..|+.++++
T Consensus 224 ~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~ll~ 293 (422)
T 3tji_A 224 HILHDVHERLFPQQAVQLAKQLEPFQPYFIED--------ILPPQQSAWLEQVRQQS--CVPLALGELFNNPAEWHDLIV 293 (422)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCGGGGGGHHHHHHHC--CCCEEECTTCCSGGGTHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhCCCeEEC--------CCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHh
Confidence 8887642 355554 4556678877631 11123456677777776 799999999999999999999
Q ss_pred hC-CCEEEEch
Q 018919 280 LG-ASGIFIGR 289 (349)
Q Consensus 280 ~G-A~~V~ig~ 289 (349)
.| +|.|++--
T Consensus 294 ~ga~d~v~~k~ 304 (422)
T 3tji_A 294 NRRIDFIRCHV 304 (422)
T ss_dssp TTCCSEECCCG
T ss_pred cCCCCEEecCc
Confidence 86 79998854
No 414
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=94.04 E-value=0.16 Score=48.90 Aligned_cols=68 Identities=12% Similarity=0.230 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
.+.++.+.++|+|+|.+....+ + ....++.+.++++.++ ++||++ |++.+.+++.++..+|||+|.+|
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g---~-~~~~~e~i~~ir~~~~-~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHG---H-STRIIELIKKIKTKYP-NLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC---S-SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCCC---C-hHHHHHHHHHHHHHCC-CCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 4668888999999999832111 1 1234667777777663 688887 77899999999999999999993
No 415
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=94.03 E-value=0.4 Score=42.34 Aligned_cols=40 Identities=23% Similarity=0.291 Sum_probs=34.5
Q ss_pred HHHHHHHHHhc-----CCcEEEEEecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTIT-----KLPILVKGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~-----~~pv~vK~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
.+.++++|+.. ++||.+-+-.+.+.+..+.++|||++++.
T Consensus 157 ~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvG 201 (230)
T 1tqj_A 157 LPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAG 201 (230)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEEC
Confidence 67788888877 79998877777799999999999999985
No 416
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=94.01 E-value=0.19 Score=48.58 Aligned_cols=145 Identities=14% Similarity=-0.016 Sum_probs=88.1
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCch--hHHhhhhcCCCCcCcccccCCCCC----Cch-HHHHHHHHHhc--
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRR--EADIKNRFTLPPFLTLKNFQGLDL----GKM-DEDVKWLQTIT-- 203 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r--~~d~~~~~~~p~~~~~~~~~~~~~----~~~-~~~i~~i~~~~-- 203 (349)
.+++.+.+.++++.+.|++++-+.++.|..... ..+-+..+ .|..-..+... ..+ .+. .+.++.+|+.+
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~-~~~~~~~p~~~-~~~~~~~~~~d~~~v~avR~a~G~ 219 (418)
T 3r4e_A 142 SDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYY-EPADASLPSVT-GWDTRKALNYVPKLFEELRKTYGF 219 (418)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTC-------------------CCCCEE-EECHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccccccccccc-ccccccccccc-cccchhHHHHHHHHHHHHHHHcCC
Confidence 577888888888888999999998876521000 00000000 00000000000 000 112 46688999987
Q ss_pred CCcEEEEEe--cCHHH----HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 018919 204 KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 277 (349)
Q Consensus 204 ~~pv~vK~v--~~~~~----a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~ka 277 (349)
+.+|.+..- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ .+||++++.+.+..|+.++
T Consensus 220 d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~ 289 (418)
T 3r4e_A 220 DHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLED--------CTPAENQEAFRLVRQHT--VTPLAVGEIFNTIWDAKDL 289 (418)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEES--------CSCCSSGGGGHHHHHHC--CSCEEECTTCCSGGGTHHH
T ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCccCHHHHHHHHhcC--CCCEEEcCCcCCHHHHHHH
Confidence 578887642 34555 45566788887731 01122455567777776 7999999999999999999
Q ss_pred HHhC-CCEEEEch
Q 018919 278 LALG-ASGIFIGR 289 (349)
Q Consensus 278 l~~G-A~~V~ig~ 289 (349)
++.| +|.|++--
T Consensus 290 l~~~a~d~v~~k~ 302 (418)
T 3r4e_A 290 IQNQLIDYIRATV 302 (418)
T ss_dssp HHTTCCSEECCCT
T ss_pred HHcCCCCeEecCc
Confidence 9987 79998864
No 417
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=94.00 E-value=3.5 Score=37.56 Aligned_cols=174 Identities=15% Similarity=0.096 Sum_probs=100.4
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------hCCCceEEEEeecCChhHHHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------TGPGIRFFQLYVYKDRNVVAQ 140 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~~~~~~~~Ql~~~~~~~~~~~ 140 (349)
|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ ++ +...+.+|-.+ ...+ .+...- ..+-..+.+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~ 82 (293)
T 1w3i_A 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIR 82 (293)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHH
Confidence 4456666432323444445677777788886554 33 23456666332 2224 444543 245566778
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCC-CCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe------
Q 018919 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTL-PPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV------ 212 (349)
Q Consensus 141 ~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~-p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v------ 212 (349)
+++.+++.|++++.+.. |.. .- | +.+ ..+..+.+.+.+++||++=.+
T Consensus 83 la~~A~~~Gadavlv~~--P~y-----------~~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 137 (293)
T 1w3i_A 83 LAKLSKDFDIVGIASYA--PYY-----------YPRM------------SEKHLVKYFKTLCEVSPHPVYLYNYPTATGK 137 (293)
T ss_dssp HHHHGGGSCCSEEEEEC--CCS-----------CSSC------------CHHHHHHHHHHHHHHCSSCEEEEECHHHHSC
T ss_pred HHHHHHhcCCCEEEEcC--CCC-----------CCCC------------CHHHHHHHHHHHHhhCCCCEEEEECchhhCc
Confidence 88889999999987642 321 10 0 111 256677888888999998664
Q ss_pred -cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchH
Q 018919 213 -LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 290 (349)
Q Consensus 213 -~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~ 290 (349)
.+++...+ --.+-+|.-+. .++..+.++.+ .++++.|+ +|- ..-++.++.+||++++-+.+
T Consensus 138 ~l~~~~~~~--~pnIvgiKds~----------gd~~~~~~~~~-~~~~f~v~-~G~---d~~~~~~l~~G~~G~is~~a 199 (293)
T 1w3i_A 138 DIDAKVAKE--IGCFTGVKDTI----------ENIIHTLDYKR-LNPNMLVY-SGS---DMLIATVASTGLDGNVAAGS 199 (293)
T ss_dssp CCCHHHHHH--HCCEEEEEECC----------SCHHHHHHHHH-HCTTSEEE-ECC---STTHHHHHHTTCCEEECGGG
T ss_pred CCCHHHHHh--cCCEEEEEeCC----------CCHHHHHHHHh-cCCCEEEE-Ecc---HHHHHHHHHcCCCEEEeCHH
Confidence 35666655 22233333321 12444555555 54466654 442 13466788999999998875
No 418
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=94.00 E-value=0.27 Score=45.10 Aligned_cols=40 Identities=25% Similarity=0.290 Sum_probs=34.5
Q ss_pred HHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++.++++++.+++||++-+ +.+++++..++++|||+|.+.
T Consensus 230 ~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 4778899988899988654 679999999999999999884
No 419
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=93.99 E-value=0.28 Score=47.22 Aligned_cols=127 Identities=12% Similarity=0.009 Sum_probs=85.5
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|++++-+ +..+..+.. .+ ..+.+. .+.++.+|+.+ +.+|.+
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~---------~~----------~~~~~~d~e~v~avR~avG~d~~L~v 183 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKL-NGCEEMGII---------DT----------SRAVDAAVARVAEIRSAFGNTVEFGL 183 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCB---------CS----------HHHHHHHHHHHHHHHHTTGGGSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE-ecCCccccc---------cc----------chhHHHHHHHHHHHHHHhCCCceEEE
Confidence 56777888888888899999988 655321000 00 001112 46688889887 578887
Q ss_pred EEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- -+.++| +.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..|+.++++.| +
T Consensus 184 DaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~i~~~~~~~~~l~~~a~ 253 (405)
T 3rr1_A 184 DFHGRVSAPMAKVLIKELEPYRPLFIEE--------PVLAEQAETYARLAAHT--HLPIAAGERMFSRFDFKRVLEAGGV 253 (405)
T ss_dssp ECCSCBCHHHHHHHHHHHGGGCCSCEEC--------SSCCSSTHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHHHCCC
T ss_pred ECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhcC--CCCEEecCCcCCHHHHHHHHHHhCC
Confidence 642 355554 5566778877731 01122456677777665 79999999999999999999976 7
Q ss_pred CEEEEch
Q 018919 283 SGIFIGR 289 (349)
Q Consensus 283 ~~V~ig~ 289 (349)
|.|++--
T Consensus 254 d~v~~d~ 260 (405)
T 3rr1_A 254 SILQPDL 260 (405)
T ss_dssp SEECCBT
T ss_pred CeEEECh
Confidence 9998854
No 420
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=93.99 E-value=2.7 Score=39.54 Aligned_cols=234 Identities=14% Similarity=0.106 Sum_probs=116.6
Q ss_pred CcceeecccccccccCChhhHHHHHHHHHcCCe-----EE-ecCCCCCCHHHHHhh-C---CCceEEEEee--cCChhHH
Q 018919 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI-----MT-LSSWSTSSVEEVAST-G---PGIRFFQLYV--YKDRNVV 138 (349)
Q Consensus 71 ~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~-----~~-~~~~~~~~~e~i~~~-~---~~~~~~Ql~~--~~~~~~~ 138 (349)
..|++||=+|..--.+-+.-..|.++|+++|.. .+ +-++ ..+++... . .+..+++.|. .-..+..
T Consensus 4 ~~~~IIAEig~NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQt~---~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~ 80 (350)
T 3g8r_A 4 SKPLFIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYR---NLDTFIHSSFKGRDDVKYVKRFEETRLQPEQM 80 (350)
T ss_dssp -CCEEEEECTTTTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEEC---CHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHH
T ss_pred CCCEEEEEECCCccCcHHHHHHHHHHHHHhCCcccCCeeEEcccc---chhhhcChhccCccHHHHHHHHHHhcCCHHHH
Confidence 469999999764332333335688889999874 22 2222 23333211 0 1111222221 1234556
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCC-cCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe-cCHH
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV-LTAE 216 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~-~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v-~~~~ 216 (349)
..+.+.+++.|...+.--.| .+.-|+-..+.+|- ++..++ -..+..|+++.+ ++.||++|.- .+.+
T Consensus 81 ~~L~~~~~~~Gi~~~st~fD-----~~svd~l~~~~v~~~KI~S~~------~~N~pLL~~va~-~gKPviLstGmstl~ 148 (350)
T 3g8r_A 81 QKLVAEMKANGFKAICTPFD-----EESVDLIEAHGIEIIKIASCS------FTDWPLLERIAR-SDKPVVASTAGARRE 148 (350)
T ss_dssp HHHHHHHHHTTCEEEEEECS-----HHHHHHHHHTTCCEEEECSSS------TTCHHHHHHHHT-SCSCEEEECTTCCHH
T ss_pred HHHHHHHHHcCCcEEeccCC-----HHHHHHHHHcCCCEEEECccc------ccCHHHHHHHHh-hCCcEEEECCCCCHH
Confidence 66777777888877642222 12222323332221 111111 111567888775 6999999975 4666
Q ss_pred HHHHH----HHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEe----cCCCCHHHHHHHHHhCCCEEEEc
Q 018919 217 DARIA----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD----GGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 217 ~a~~a----~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~----GGI~~~~dv~kal~~GA~~V~ig 288 (349)
+...+ .+.|.+.+.+....+.........+..++.+++..+ ++||..+ |+. . .-++.|.++||+ +|=
T Consensus 149 Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp-~lpVG~SdHt~g~~-~-~~~~AAvAlGA~--vIE 223 (350)
T 3g8r_A 149 DIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYA-GVRIGYSTHEDPDL-M-EPIMLAVAQGAT--VFE 223 (350)
T ss_dssp HHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCT-TSEEEEEECCCSSC-C-HHHHHHHHTTCC--EEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCC-CCCEEcCCCCCCCc-c-HHHHHHHHcCCC--EEE
Confidence 65444 346777555432211111111124566777776652 5888666 322 2 234578999997 444
Q ss_pred hHHHHHH--hhcCHHH-HHHHHHHHHHHHHHHHHHcCCC
Q 018919 289 RPVVYSL--AAEGEKG-VRRVLEMLREEFELAMALSGCR 324 (349)
Q Consensus 289 ~~~l~~~--~~~G~~g-v~~~l~~l~~el~~~m~~~G~~ 324 (349)
+-|--.- ...+... --+-++.+.++++..-..+|..
T Consensus 224 kH~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~alG~~ 262 (350)
T 3g8r_A 224 KHVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLGDG 262 (350)
T ss_dssp EEBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHHCCT
T ss_pred EecCcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 3221100 0011100 0123556666777777777753
No 421
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.97 E-value=0.25 Score=45.87 Aligned_cols=91 Identities=12% Similarity=0.185 Sum_probs=58.9
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-..-.+.+..+++.+ +++|||+.=|=.+-.++++ |-++|||++++-.|+.
T Consensus 35 v~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~ 113 (313)
T 3dz1_A 35 TDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPS 113 (313)
T ss_dssp HHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45577899999999665331100 1111235566666777 7899998766566666664 3348999999999984
Q ss_pred HHHhhcCHHHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLREE 313 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~~e 313 (349)
+ ..++++.++++.+.+.
T Consensus 114 ~----~s~~~l~~~f~~va~a 130 (313)
T 3dz1_A 114 L----RTDEQITTYFRQATEA 130 (313)
T ss_dssp C----CSHHHHHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHHHHh
Confidence 3 2466666666655554
No 422
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=93.92 E-value=0.2 Score=47.42 Aligned_cols=67 Identities=21% Similarity=0.216 Sum_probs=49.1
Q ss_pred HHHHHHHHc--CCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 216 EDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 216 ~~a~~a~~~--G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
+.+..+.+. |+|.+.++...| .....++.+.++++..+ ++||++ |++.+.+|+.++..+|||+|.++
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g----~~~~~~~~i~~lr~~~~-~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG----YSEHFVEFVKDVRKRFP-QHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT----TBHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhccCCCCEEEEEecCC----CcHHHHHHHHHHHHhcC-CCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 445566666 999988863322 12335677888877653 588885 67899999999999999999885
No 423
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=93.90 E-value=0.33 Score=45.67 Aligned_cols=79 Identities=15% Similarity=0.215 Sum_probs=60.7
Q ss_pred ceEEEEeec---CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHH
Q 018919 124 IRFFQLYVY---KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQ 200 (349)
Q Consensus 124 ~~~~Ql~~~---~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~ 200 (349)
|..+|--.+ .|.+.+.+.++++.++|++.+-+++... +..+.++.++
T Consensus 31 Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp~~------------------------------~~a~al~~I~ 80 (366)
T 3noy_A 31 PIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPHK------------------------------EDVEALEEIV 80 (366)
T ss_dssp CCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECCSH------------------------------HHHHHHHHHH
T ss_pred cEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCCh------------------------------HHHHHHHHHH
Confidence 445554332 3566788889999999999998876321 1146799999
Q ss_pred HhcCCcEEEEEecCHHHHHHHHHcCCCEEEEe
Q 018919 201 TITKLPILVKGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 201 ~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
+.+++|+++=.-.++..|..|+++|+|.+.+.
T Consensus 81 ~~~~vPlvaDiHf~~~lal~a~e~G~dklRIN 112 (366)
T 3noy_A 81 KKSPMPVIADIHFAPSYAFLSMEKGVHGIRIN 112 (366)
T ss_dssp HHCSSCEEEECCSCHHHHHHHHHTTCSEEEEC
T ss_pred hcCCCCEEEeCCCCHHHHHHHHHhCCCeEEEC
Confidence 99999999755589999999999999998773
No 424
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=93.83 E-value=0.32 Score=47.45 Aligned_cols=98 Identities=17% Similarity=0.234 Sum_probs=63.1
Q ss_pred Cc-eEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCC---ch-HHHHH
Q 018919 123 GI-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG---KM-DEDVK 197 (349)
Q Consensus 123 ~~-~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~---~~-~~~i~ 197 (349)
.| .++.+-...+.+...+.++.++++|+++|.++-.+. .+. ++. .+. ....++..+ .. ++.++
T Consensus 297 ~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~---~~~-d~~-~~~-------~~~GGlSG~~~~~~sl~~i~ 364 (443)
T 1tv5_A 297 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT---QIN-DIK-SFE-------NKKGGVSGAKLKDISTKFIC 364 (443)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBS---CCC-CCG-GGT-------TCCSEEEEHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCc---ccc-ccc-ccc-------cccCCcCCCcchHHHHHHHH
Confidence 35 677775544555677889999999999998754321 110 000 000 000000001 12 57799
Q ss_pred HHHHhc--CCcEEE-EEecCHHHHHHHHHcCCCEEEEe
Q 018919 198 WLQTIT--KLPILV-KGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 198 ~i~~~~--~~pv~v-K~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++++.+ ++||+. .++.+.++|.+++.+|||+|.+.
T Consensus 365 ~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 365 EMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEES
T ss_pred HHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 999988 899864 45789999999999999999883
No 425
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.80 E-value=0.054 Score=50.11 Aligned_cols=91 Identities=16% Similarity=0.176 Sum_probs=56.6
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.=|=.+-.++++ +-++|||+|++-.|++
T Consensus 31 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 110 (300)
T 3eb2_A 31 CDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAY 110 (300)
T ss_dssp HHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCS
T ss_pred HHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 34567899999988654331100 111123555666666677899887655555566554 3358999999999988
Q ss_pred HHHhhcCHHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEMLR 311 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l~ 311 (349)
+. -.++++.++++.+.
T Consensus 111 ~~---~~~~~l~~~f~~va 126 (300)
T 3eb2_A 111 FP---LKDAQIESYFRAIA 126 (300)
T ss_dssp SC---CCHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHH
Confidence 63 23555555544443
No 426
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=93.79 E-value=0.36 Score=46.24 Aligned_cols=117 Identities=12% Similarity=0.051 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHcCCCEEEE-ecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEEEe
Q 018919 137 VVAQLVRRAERAGFKAIAL-TVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVKGV 212 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i-~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK~v 212 (349)
...+.++++.+.|++++-+ -++.+. .+++. .+.++.+|+.+ +.+|.+..-
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~--------------------------~~~~~d~~~v~avR~a~G~d~~l~vDan 208 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDK--------------------------VSDKEIVAYLRELREVIGWDMDMMVDCL 208 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTT--------------------------SCHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCc--------------------------cCHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 3445667777889999877 343110 01222 56789999887 578887643
Q ss_pred --c-CHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCE
Q 018919 213 --L-TAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASG 284 (349)
Q Consensus 213 --~-~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~ 284 (349)
- +.++| +.+.+.|++.|-= ...+..++.+.++++.+ ++||++++.+.+..|+.++++.| +|.
T Consensus 209 ~~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~d~ 278 (394)
T 3mqt_A 209 YRWTDWQKARWTFRQLEDIDLYFIEA--------CLQHDDLIGHQKLAAAI--NTRLCGAEMSTTRFEAQEWLEKTGISV 278 (394)
T ss_dssp TCCSCHHHHHHHHHHTGGGCCSEEES--------CSCTTCHHHHHHHHHHS--SSEEEECTTCCHHHHHHHHHHHHCCSE
T ss_pred CCCCCHHHHHHHHHHHhhcCCeEEEC--------CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcCCCCe
Confidence 3 56654 4455678877731 11223567788888876 79999999999999999999975 899
Q ss_pred EEEch
Q 018919 285 IFIGR 289 (349)
Q Consensus 285 V~ig~ 289 (349)
|++--
T Consensus 279 v~~k~ 283 (394)
T 3mqt_A 279 VQSDY 283 (394)
T ss_dssp ECCCT
T ss_pred EecCc
Confidence 98853
No 427
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=93.78 E-value=1.4 Score=41.39 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=63.0
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 272 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~ 272 (349)
++.|.+.++..+++++. .+.+.+.+..+.+.|+|.+.|... ....+..|.++.+. +.|||.+-|..|-+
T Consensus 80 ~~~L~~~~~~~Gi~~~s-t~fD~~svd~l~~~~v~~~KI~S~-------~~~N~pLL~~va~~---gKPviLstGmstl~ 148 (350)
T 3g8r_A 80 MQKLVAEMKANGFKAIC-TPFDEESVDLIEAHGIEIIKIASC-------SFTDWPLLERIARS---DKPVVASTAGARRE 148 (350)
T ss_dssp HHHHHHHHHHTTCEEEE-EECSHHHHHHHHHTTCCEEEECSS-------STTCHHHHHHHHTS---CSCEEEECTTCCHH
T ss_pred HHHHHHHHHHcCCcEEe-ccCCHHHHHHHHHcCCCEEEECcc-------cccCHHHHHHHHhh---CCcEEEECCCCCHH
Confidence 45577777778999875 578899999999999999999532 12346677776642 78999999999999
Q ss_pred HHHHHHH----hCCCEEEE
Q 018919 273 DVFKALA----LGASGIFI 287 (349)
Q Consensus 273 dv~kal~----~GA~~V~i 287 (349)
++..|+. .|.+ |.+
T Consensus 149 Ei~~Ave~i~~~g~~-viL 166 (350)
T 3g8r_A 149 DIDKVVSFMLHRGKD-LTI 166 (350)
T ss_dssp HHHHHHHHHHTTTCC-EEE
T ss_pred HHHHHHHHHHHcCCC-EEE
Confidence 9988765 3666 444
No 428
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=93.78 E-value=0.29 Score=44.30 Aligned_cols=41 Identities=29% Similarity=0.283 Sum_probs=35.7
Q ss_pred HHHHHHHHHhcCCcEEEEEe-cCHHHHHHHHHcCCCEEEEec
Q 018919 193 DEDVKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v-~~~~~a~~a~~~G~d~I~v~~ 233 (349)
.+.++++|+.+++||.+.+- .+++++..+..+|||+++|.+
T Consensus 194 ~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 194 HHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp HHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 57899999988999998774 569999999999999999954
No 429
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=93.77 E-value=0.74 Score=40.99 Aligned_cols=125 Identities=15% Similarity=0.107 Sum_probs=79.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEE-
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKG- 211 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~- 211 (349)
...+.+.++.+++.+.|+.+++++-. +....++.-+..++.|..=.
T Consensus 40 ~t~~~i~~lc~eA~~~~~~aVcV~p~---------------------------------~v~~a~~~L~~s~v~v~tVig 86 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAEYKFASVCVNPT---------------------------------WVPLCAELLKGTGVKVCTVIG 86 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG---------------------------------GHHHHHHHHTTSSCEEEEEES
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH---------------------------------HHHHHHHHhCCCCCeEEEEec
Confidence 45667788888999999999986321 12222222222344443211
Q ss_pred e----cC----HHHHHHHHHcCCCEEEEe-cCCCCCCCCc-hhhHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHH---
Q 018919 212 V----LT----AEDARIAVQAGAAGIIVS-NHGARQLDYV-PATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKA--- 277 (349)
Q Consensus 212 v----~~----~~~a~~a~~~G~d~I~v~-~~gg~~~~~~-~~~~~~l~~i~~~~~~-~ipvia~GGI~~~~dv~ka--- 277 (349)
. .+ ..+++.|++.|||.|.+. |.|. -.++. ..-.+.+..+++++++ -++||..-|.-+.+.+.++
T Consensus 87 FP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~-lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~i 165 (239)
T 3ngj_A 87 FPLGATPSEVKAYETKVAVEQGAEEVDMVINIGM-VKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKR 165 (239)
T ss_dssp TTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHH-HHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHH
T ss_pred cCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHH-hccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHH
Confidence 0 11 257889999999999975 3331 01111 1134566677777643 3788888888898999888
Q ss_pred -HHhCCCEEEEchHH
Q 018919 278 -LALGASGIFIGRPV 291 (349)
Q Consensus 278 -l~~GA~~V~ig~~~ 291 (349)
..+|||+|=..+-|
T Consensus 166 a~~aGADfVKTSTGf 180 (239)
T 3ngj_A 166 CVAAGAEYVKTSTGF 180 (239)
T ss_dssp HHHHTCSEEECCCSS
T ss_pred HHHHCcCEEECCCCC
Confidence 77899999988755
No 430
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.76 E-value=0.21 Score=45.75 Aligned_cols=70 Identities=30% Similarity=0.410 Sum_probs=52.7
Q ss_pred ecCHHHHHHHHHcCCCEEEEecC---CCCCCCCchhhHHHHHHHHHHhcCCCcEEEe-----cCCCCH--------HHHH
Q 018919 212 VLTAEDARIAVQAGAAGIIVSNH---GARQLDYVPATIMALEEVVKATQGRIPVFLD-----GGVRRG--------TDVF 275 (349)
Q Consensus 212 v~~~~~a~~a~~~G~d~I~v~~~---gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~-----GGI~~~--------~dv~ 275 (349)
+.+.+++..|.+.|||.|-+-.. ||. .|+...+..+++.+ ++||.+- |+.... +|+.
T Consensus 46 ~~s~~~a~~A~~gGAdRIELc~~l~~GGl-----TPS~g~i~~a~~~~--~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~ 118 (287)
T 3iwp_A 46 VDSVESAVNAERGGADRIELCSGLSEGGT-----TPSMGVLQVVKQSV--QIPVFVMIRPRGGDFLYSDREIEVMKADIR 118 (287)
T ss_dssp ESSHHHHHHHHHHTCSEEEECBCGGGTCB-----CCCHHHHHHHHTTC--CSCEEEECCSSSSCSCCCHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHhCCCEEEECCCCCCCCC-----CCCHHHHHHHHHhc--CCCeEEEEecCCCCcccCHHHHHHHHHHHH
Confidence 37899999999999999998532 332 34556666666655 6888874 334333 7999
Q ss_pred HHHHhCCCEEEEc
Q 018919 276 KALALGASGIFIG 288 (349)
Q Consensus 276 kal~~GA~~V~ig 288 (349)
.+.++|||+|.+|
T Consensus 119 ~~~~~GAdGvVfG 131 (287)
T 3iwp_A 119 LAKLYGADGLVFG 131 (287)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHHcCCCEEEEe
Confidence 9999999999999
No 431
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=93.76 E-value=0.29 Score=47.44 Aligned_cols=141 Identities=12% Similarity=-0.008 Sum_probs=88.5
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcC------CCCcCcccccCCCCC----Cch-HHHHHHHHH
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT------LPPFLTLKNFQGLDL----GKM-DEDVKWLQT 201 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~------~p~~~~~~~~~~~~~----~~~-~~~i~~i~~ 201 (349)
.+++.+.+.++++.+.|++++-+.++.|..... .+.. .|..-..+.. ...+ .+. .+.++.+|+
T Consensus 149 ~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~-----~g~~~~~~~~~~~~~~~p~~-~~~d~~~~~~~d~e~v~avR~ 222 (425)
T 3vcn_A 149 ETIEDTIAEAVKYKAMGYKAIRLQTGVPGLAST-----YGVSKDKMFYEPADNDLPTE-NIWSTAKYLNSVPKLFERARE 222 (425)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCC-----TTCSSCSSCCCCCCBSSCCE-EEECHHHHHTTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCcccccc-----ccccccccccCccccccccc-ccccchhHHHHHHHHHHHHHH
Confidence 567778888888888999999888875310000 0000 0000000000 0000 112 577999999
Q ss_pred hc--CCcEEEEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 018919 202 IT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 273 (349)
Q Consensus 202 ~~--~~pv~vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d 273 (349)
.+ +.+|.+..- -+.++| +.+.+.|++.|--- ..+..++.+.++++.+ ++||++++.+.+..|
T Consensus 223 a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~ 292 (425)
T 3vcn_A 223 VLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDS--------VPAENQAGFRLIRQHT--TTPLAVGEIFAHVWD 292 (425)
T ss_dssp HHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC--------SCCSSTTHHHHHHHHC--CSCEEECTTCCSGGG
T ss_pred HcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CChhhHHHHHHHHhcC--CCCEEeCCCcCCHHH
Confidence 87 578887642 355554 55667888877410 1122455677777776 799999999999999
Q ss_pred HHHHHHhC-CCEEEEch
Q 018919 274 VFKALALG-ASGIFIGR 289 (349)
Q Consensus 274 v~kal~~G-A~~V~ig~ 289 (349)
+.++++.| +|.|++--
T Consensus 293 ~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 293 AKQLIEEQLIDYLRATV 309 (425)
T ss_dssp THHHHHTTCCSEECCCT
T ss_pred HHHHHHcCCCCeEecCh
Confidence 99999987 79998864
No 432
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=93.75 E-value=1.8 Score=41.11 Aligned_cols=121 Identities=17% Similarity=0.090 Sum_probs=83.0
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVK 210 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK 210 (349)
.+++...+.++++.+.|+..+-+.++.. +.+. .+.++.+|+.+ ++++.+.
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~~K~Kvg~~----------------------------~~~~d~~~v~avR~a~~~~~l~vD 198 (385)
T 3i6e_A 147 PDFDADIALMERLRADGVGLIKLKTGFR----------------------------DHAFDIMRLELIARDFPEFRVRVD 198 (385)
T ss_dssp SSHHHHHHHHHHHHHHTCCEEEEECSSS----------------------------CHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC----------------------------CHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4566666667777778999998877531 1111 46688888886 5678775
Q ss_pred Ee--cCH----HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CC
Q 018919 211 GV--LTA----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 283 (349)
Q Consensus 211 ~v--~~~----~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~ 283 (349)
.- -+. +.++.+.+.|++.|- + ...+..++.+.++++.. .+||+++.-+.+..|+.+++..| +|
T Consensus 199 an~~~~~~~A~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~~~~d 268 (385)
T 3i6e_A 199 YNQGLEIDEAVPRVLDVAQFQPDFIE-------Q-PVRAHHFELMARLRGLT--DVPLLADESVYGPEDMVRAAHEGICD 268 (385)
T ss_dssp CTTCCCGGGHHHHHHHHHTTCCSCEE-------C-CSCTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHHTCCS
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCCcccHHHHHHHHHhC--CCCEEEeCCcCCHHHHHHHHHcCCCC
Confidence 32 233 345666777877763 1 11223467777777655 79999999999999999999876 79
Q ss_pred EEEEchHH
Q 018919 284 GIFIGRPV 291 (349)
Q Consensus 284 ~V~ig~~~ 291 (349)
.|++--..
T Consensus 269 ~v~~k~~~ 276 (385)
T 3i6e_A 269 GVSIKIMK 276 (385)
T ss_dssp EEEECHHH
T ss_pred EEEecccc
Confidence 99887544
No 433
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=93.73 E-value=0.19 Score=47.37 Aligned_cols=90 Identities=13% Similarity=0.137 Sum_probs=53.5
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 293 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l~ 293 (349)
++.+++.|+|+|++.++.|-...-...-...+-+. .+.+++|||+.-|=.+-.++++ |-++|||+|++-.|+++
T Consensus 53 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (344)
T 2hmc_A 53 GKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLS 130 (344)
T ss_dssp HHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred HHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 45577899999999665331110111112222222 3446899987766556566654 33489999999999876
Q ss_pred H-HhhcCHHHHHHHHHHHHH
Q 018919 294 S-LAAEGEKGVRRVLEMLRE 312 (349)
Q Consensus 294 ~-~~~~G~~gv~~~l~~l~~ 312 (349)
. . .++++.++++.+.+
T Consensus 131 ~~~---s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 131 RGS---VIAAQKAHFKAILS 147 (344)
T ss_dssp STT---CHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHh
Confidence 3 2 35555555554443
No 434
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=93.71 E-value=0.73 Score=40.02 Aligned_cols=111 Identities=17% Similarity=0.082 Sum_probs=66.8
Q ss_pred HHHHHcCCeEEecCCCCCCHHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcC
Q 018919 95 RAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (349)
Q Consensus 95 ~aa~~~G~~~~~~~~~~~~~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~ 174 (349)
..+.+.|+.++.-.....+.+++++..++ .++-+-. .+. +.++++.+.|++.+.+.--.+.
T Consensus 82 ~~a~~~gad~v~l~~~~~~~~~~~~~~~~-~~ig~sv-~t~----~~~~~a~~~gaD~i~~~~~f~~------------- 142 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGSFSPKQIRARFPH-LHIGRSV-HSL----EEAVQAEKEDADYVLFGHVFET------------- 142 (221)
T ss_dssp HHHHTTTCCEEEECTTSCCHHHHHHHCTT-CEEEEEE-CSH----HHHHHHHHTTCSEEEEECCC---------------
T ss_pred HHHHHcCCCEEEeCCCccCHHHHHHHCCC-CEEEEEc-CCH----HHHHHHHhCCCCEEEECCcccc-------------
Confidence 45666777665322333456666665542 2222211 232 3456777899999876321000
Q ss_pred CCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEec
Q 018919 175 LPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 175 ~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
+. .+. .+.+ |+.++++++..++|+++=+-.+++++..+.++|+|+|.++.
T Consensus 143 -~~---~~g-----~~~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 143 -DC---KKG-----LEGRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp -----------------CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTTCSEEEESH
T ss_pred -CC---CCC-----CCCCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCEEEEhH
Confidence 00 000 0123 88899998888999887665599999999999999999853
No 435
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=93.71 E-value=1.2 Score=40.10 Aligned_cols=188 Identities=17% Similarity=0.134 Sum_probs=0.0
Q ss_pred eecccccccccCChhhHHHHHHHHHcCCeEEecCCCCC-------------------CHHHHHhhCCCceEEEE-eecCC
Q 018919 75 MIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS-------------------SVEEVASTGPGIRFFQL-YVYKD 134 (349)
Q Consensus 75 ~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~-------------------~~e~i~~~~~~~~~~Ql-~~~~~ 134 (349)
++.|..+ |...|+.+.+.|+..++.+.++. ..+.|.+..+-+...-+ ++..+
T Consensus 22 i~~~~ay--------D~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~ 93 (255)
T 2qiw_A 22 LVLPTVW--------DTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGL 93 (255)
T ss_dssp EECCEES--------SHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTC
T ss_pred EEEecCc--------CHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCc
Q ss_pred hhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc---CCcEEEE
Q 018919 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT---KLPILVK 210 (349)
Q Consensus 135 ~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~---~~pv~vK 210 (349)
.. .+.++++.++|+.++-|-=.....+.. +.+.+. .+.|+.+++.. ++|+.+-
T Consensus 94 ~~--~~~~~~l~~aGa~gv~iEd~~~~~~k~---------------------l~~~~e~~~~I~a~~~a~~~~g~~~~v~ 150 (255)
T 2qiw_A 94 SP--ADLIAQILEAGAVGINVEDVVHSEGKR---------------------VREAQEHADYIAAARQAADVAGVDVVIN 150 (255)
T ss_dssp CH--HHHHHHHHHTTCCEEEECSEEGGGTTE---------------------ECCHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred HH--HHHHHHHHHcCCcEEEECCCCCCCCCc---------------------ccCHHHHHHHHHHHHHHHHhcCCCeEEE
Q ss_pred EecCHH----------------HHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH---
Q 018919 211 GVLTAE----------------DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG--- 271 (349)
Q Consensus 211 ~v~~~~----------------~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~--- 271 (349)
...... .++...++|||.|.+ -+.++.+.+.++.+.+ ++|+....+ ..+
T Consensus 151 aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~---------e~~~~~~~~~~i~~~~--~~P~n~~~~-~~~~~p 218 (255)
T 2qiw_A 151 GRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYP---------VGLSTAEQVERLVDAV--SVPVNITAH-PVDGHG 218 (255)
T ss_dssp EEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEE---------CCCCSHHHHHHHHTTC--SSCBEEECB-TTTBBT
T ss_pred EEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEE---------cCCCCHHHHHHHHHhC--CCCEEEEec-CCCCCC
Q ss_pred -HHHHHHHHhCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHH
Q 018919 272 -TDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREE 313 (349)
Q Consensus 272 -~dv~kal~~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~e 313 (349)
-.+.+.-++|.+.|..|.. .+ ..+.+.++.++++
T Consensus 219 ~~~~~eL~~lGv~~v~~~~~-a~-------~a~~~~~~~i~~~ 253 (255)
T 2qiw_A 219 AGDLATLAGLGVRRVTFGPL-WQ-------KWLAATSAQQLKG 253 (255)
T ss_dssp TBCHHHHHHTTCCEEECTTH-HH-------HHHHHHHHHHHGG
T ss_pred CCCHHHHHHcCCCEEEEHHH-HH-------HHHHHHHHHHHhc
No 436
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=93.68 E-value=0.23 Score=45.51 Aligned_cols=78 Identities=24% Similarity=0.293 Sum_probs=57.2
Q ss_pred hcCCcEEEEEecCHHHHHHHHHcCCCEEEEec--------CCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 018919 202 ITKLPILVKGVLTAEDARIAVQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 273 (349)
Q Consensus 202 ~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~--------~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~d 273 (349)
..+.|+++ .+...+.++.+.++|+++|.+.. .+|.. .....+.+.++++.+ ++|++...++.+.++
T Consensus 19 ~~~~~~i~-~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~---~~~~~~~i~~i~~~~--~~Pvi~~~~~~~~~~ 92 (297)
T 2zbt_A 19 MFKGGVIM-DVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVA---RMSDPKIIKEIMAAV--SIPVMAKVRIGHFVE 92 (297)
T ss_dssp GGTTEEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCC---CCCCHHHHHHHHTTC--SSCEEEEEETTCHHH
T ss_pred HhhCCeee-eechHHHHHHHHHCCCcEEEeccccchHHHhhcCCc---cCCCHHHHHHHHHhc--CCCeEEEeccCCHHH
Confidence 34668776 56678999999999999998721 11110 122356677776655 789999888888888
Q ss_pred HHHHHHhCCCEE
Q 018919 274 VFKALALGASGI 285 (349)
Q Consensus 274 v~kal~~GA~~V 285 (349)
+..++++|||+|
T Consensus 93 ~~~~~~aGad~v 104 (297)
T 2zbt_A 93 AMILEAIGVDFI 104 (297)
T ss_dssp HHHHHHTTCSEE
T ss_pred HHHHHHCCCCEE
Confidence 888999999999
No 437
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=93.66 E-value=0.24 Score=47.90 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=63.5
Q ss_pred Cc-eEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHH
Q 018919 123 GI-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQ 200 (349)
Q Consensus 123 ~~-~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~ 200 (349)
.| .++.|-+.-+.+.+.+.++.++++|+++|.++= +.. .|. |+...-....++ +|.-.... ++.|++++
T Consensus 269 ~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~N-tt~--~r~-dl~~~~~~~GGl-----SG~a~~p~al~~I~~v~ 339 (415)
T 3i65_A 269 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISN-TTT--QIN-DIKSFENKKGGV-----SGAKLKDISTKFICEMY 339 (415)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECC-CBS--CCC-CCGGGTTCCSEE-----EEGGGHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC-CCc--ccc-cccccccccCCc-----CCccchHHHHHHHHHHH
Confidence 45 678886655555678899999999999997642 211 111 010000000000 00000112 57799999
Q ss_pred Hhc--CCcEEE-EEecCHHHHHHHHHcCCCEEEEe
Q 018919 201 TIT--KLPILV-KGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 201 ~~~--~~pv~v-K~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
+.+ ++||+. .+|.+.++|.+++.+|||+|.+.
T Consensus 340 ~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 340 NYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLY 374 (415)
T ss_dssp HHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEES
T ss_pred HHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 988 699764 44789999999999999999984
No 438
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.65 E-value=0.14 Score=48.48 Aligned_cols=90 Identities=20% Similarity=0.262 Sum_probs=56.5
Q ss_pred HHHHHHcCCCEEEEecCCCCCCC-CchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~-~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+++.|+|+|++.++.|-... +-....+.+..+++.+++++|||+.=|=.+-.++++ |-++|||++++-.|++
T Consensus 86 v~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY 165 (360)
T 4dpp_A 86 VNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYY 165 (360)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45677899999999665331110 111123455566666677899998655555666654 3347999999999987
Q ss_pred HHHhhcCHHHHHHHHHHH
Q 018919 293 YSLAAEGEKGVRRVLEML 310 (349)
Q Consensus 293 ~~~~~~G~~gv~~~l~~l 310 (349)
+. -.++++.++++.+
T Consensus 166 ~k---~sq~gl~~hf~~I 180 (360)
T 4dpp_A 166 GK---TSIEGLIAHFQSV 180 (360)
T ss_dssp SC---CCHHHHHHHHHTT
T ss_pred CC---CCHHHHHHHHHHH
Confidence 53 2345555554444
No 439
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.62 E-value=0.1 Score=48.05 Aligned_cols=76 Identities=17% Similarity=0.277 Sum_probs=50.4
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCc-hhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHhCCCEEEEchHHH
Q 018919 218 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 292 (349)
Q Consensus 218 a~~a~~~G~d~I~v~~~gg~~~~~~-~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~k----al~~GA~~V~ig~~~l 292 (349)
++.+.+.|+|+|++.++.|-...-. ....+.+..+++.+++++|||+.-|=.+-.++++ +-++|||++++-.|++
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3a5f_A 28 IEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYY 107 (291)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 4556789999999976544211111 1123455556666667899987766666666654 3347999999999987
Q ss_pred H
Q 018919 293 Y 293 (349)
Q Consensus 293 ~ 293 (349)
+
T Consensus 108 ~ 108 (291)
T 3a5f_A 108 N 108 (291)
T ss_dssp S
T ss_pred C
Confidence 5
No 440
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=93.60 E-value=2.2 Score=40.54 Aligned_cols=120 Identities=18% Similarity=0.078 Sum_probs=82.7
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
.+++.+.+.++++.+.|+..+-+.++. +++. .+.++.+|+.+ ++++.+
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g~-----------------------------~~~~d~~~v~avR~a~g~~~~L~v 191 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTGA-----------------------------DFNRDIQLLKALDNEFSKNIKFRF 191 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSS-----------------------------CHHHHHHHHHHHHHHCCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecCC-----------------------------CHHHHHHHHHHHHHhcCCCCeEEE
Confidence 467777777777788899999887642 1112 46789999987 467777
Q ss_pred EEe--cCHHHH----HHHHH--cCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC
Q 018919 210 KGV--LTAEDA----RIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 281 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~--~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G 281 (349)
..- -+.++| +.+.+ .+++.|- + ...+..++.+.++++.. .+||.++.-+.+..|+.+++..|
T Consensus 192 DaN~~w~~~~A~~~~~~l~~~~~~l~~iE-------e-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 261 (379)
T 3r0u_A 192 DANQGWNLAQTKQFIEEINKYSLNVEIIE-------Q-PVKYYDIKAMAEITKFS--NIPVVADESVFDAKDAERVIDEQ 261 (379)
T ss_dssp ECTTCCCHHHHHHHHHHHHTSCCCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHHHTT
T ss_pred eCCCCcCHHHHHHHHHHHhhcCCCcEEEE-------C-CCCcccHHHHHHHHhcC--CCCEEeCCccCCHHHHHHHHHcC
Confidence 532 355555 44445 3433331 1 11223467788888776 79999999999999999999987
Q ss_pred -CCEEEEchHH
Q 018919 282 -ASGIFIGRPV 291 (349)
Q Consensus 282 -A~~V~ig~~~ 291 (349)
+|.|++--..
T Consensus 262 a~d~v~~k~~~ 272 (379)
T 3r0u_A 262 ACNMINIKLAK 272 (379)
T ss_dssp CCSEEEECHHH
T ss_pred CCCEEEECccc
Confidence 6999986544
No 441
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=93.59 E-value=0.3 Score=47.29 Aligned_cols=143 Identities=15% Similarity=0.089 Sum_probs=88.1
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCC----CchhHHhhhhcCCCCcCcccccCCCCC----Cch-HHHHHHHHHhc
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRL----GRREADIKNRFTLPPFLTLKNFQGLDL----GKM-DEDVKWLQTIT 203 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~----g~r~~d~~~~~~~p~~~~~~~~~~~~~----~~~-~~~i~~i~~~~ 203 (349)
.+++.+.+.++++.+.|++++-+.++.|.. |.... ...+ .|..-..+.. ...+ .+. .+.++.+|+.+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~--~~~~-~~~~~~~p~~-~~~d~~~~~~~d~e~v~avR~av 223 (424)
T 3v3w_A 148 KDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTN--TKSY-EPADADLPSV-EVWSTEKYLNYIPDVFAAVRKEF 223 (424)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-------C-CSCCBSSCCE-EEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCcccccccccccc--cccc-cccccccccc-ccccchhHHHHHHHHHHHHHHHc
Confidence 567778888888888999999988875310 00000 0000 0000000000 0000 112 46689999987
Q ss_pred --CCcEEEEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHH
Q 018919 204 --KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVF 275 (349)
Q Consensus 204 --~~pv~vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~ 275 (349)
+.+|.+..- -+.++| +.+.+.|++.|-=- ..+..++.+.++++.+ .+||++++.+.+..|+.
T Consensus 224 G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~ 293 (424)
T 3v3w_A 224 GPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDA--------VPAENQESFKLIRQHT--TTPLAVGEVFNSIHDCR 293 (424)
T ss_dssp CSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC--------SCCSSTTHHHHHHHHC--CSCEEECTTCCSGGGTH
T ss_pred CCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECC--------CChHhHHHHHHHHhhC--CCCEEEccCcCCHHHHH
Confidence 578887642 345554 55667888877410 1122456677777776 79999999999999999
Q ss_pred HHHHhC-CCEEEEch
Q 018919 276 KALALG-ASGIFIGR 289 (349)
Q Consensus 276 kal~~G-A~~V~ig~ 289 (349)
++++.| +|.|++--
T Consensus 294 ~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 294 ELIQNQWIDYIRTTI 308 (424)
T ss_dssp HHHHTTCCSEECCCT
T ss_pred HHHHcCCCCeEeecc
Confidence 999987 79998864
No 442
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=93.52 E-value=0.59 Score=42.76 Aligned_cols=125 Identities=14% Similarity=0.132 Sum_probs=77.6
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEE-
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKG- 211 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~- 211 (349)
...+.+.++.+.+.+.|+.+++++-. +....++..+..+++|..=.
T Consensus 71 ~T~~dI~~lc~eA~~~g~aaVCV~P~---------------------------------~V~~a~~~L~~s~V~V~tVig 117 (288)
T 3oa3_A 71 ATGSQIDVLCAEAKEYGFATVCVRPD---------------------------------YVSRAVQYLQGTQVGVTCVIG 117 (288)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECGG---------------------------------GHHHHHHHTTTSSCEEEEEES
T ss_pred CCHHHHHHHHHHHHhcCCcEEEECHH---------------------------------HHHHHHHHcCCCCCeEEEEeC
Confidence 34566778888888999999987421 11222222222345543211
Q ss_pred e----cC----HHHHHHHHHcCCCEEEEe-cCCCCCCCC-chhhHHHHHHHHHHhcCC-CcEEEecCCCCHHHHHH----
Q 018919 212 V----LT----AEDARIAVQAGAAGIIVS-NHGARQLDY-VPATIMALEEVVKATQGR-IPVFLDGGVRRGTDVFK---- 276 (349)
Q Consensus 212 v----~~----~~~a~~a~~~G~d~I~v~-~~gg~~~~~-~~~~~~~l~~i~~~~~~~-ipvia~GGI~~~~dv~k---- 276 (349)
. .+ ..+++.|++.|||.|.+. |.|.. .++ .....+.+..++++++.. +.||..-|.-+.+++.+
T Consensus 118 FP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~l-k~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~i 196 (288)
T 3oa3_A 118 FHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWL-SEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVL 196 (288)
T ss_dssp TTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHHH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhh-cCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHH
Confidence 1 11 257889999999999864 32221 111 122346677777776543 78899988889888665
Q ss_pred HHHhCCCEEEEchHH
Q 018919 277 ALALGASGIFIGRPV 291 (349)
Q Consensus 277 al~~GA~~V~ig~~~ 291 (349)
+.++|||+|--.+-|
T Consensus 197 a~eaGADfVKTSTGf 211 (288)
T 3oa3_A 197 SSLAGADYVKTSTGF 211 (288)
T ss_dssp HHHTTCSEEECCCSS
T ss_pred HHHcCCCEEEcCCCC
Confidence 445899999887644
No 443
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=93.47 E-value=0.75 Score=42.86 Aligned_cols=111 Identities=16% Similarity=0.165 Sum_probs=70.3
Q ss_pred HHHHHHHHHcCCeEEecCCCC--CCHHHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHH
Q 018919 91 YATARAASAAGTIMTLSSWST--SSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREAD 168 (349)
Q Consensus 91 ~~la~aa~~~G~~~~~~~~~~--~~~e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d 168 (349)
...++.+.+.|..++...... .-++.+++. ..+.++.+ .+ .+.++.+++.|+|+|.++ .+..|
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~~-g~~v~~~v---~~----~~~a~~~~~~GaD~i~v~--g~~~G----- 142 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAGNPSKYMERFHEA-GIIVIPVV---PS----VALAKRMEKIGADAVIAE--GMEAG----- 142 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSSCGGGTHHHHHHT-TCEEEEEE---SS----HHHHHHHHHTTCSCEEEE--CTTSS-----
T ss_pred HHHHHHHHHCCCCEEEECCCChHHHHHHHHHc-CCeEEEEe---CC----HHHHHHHHHcCCCEEEEE--CCCCC-----
Confidence 356778888999877533321 112333332 23344443 22 345677888999998874 11111
Q ss_pred hhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 169 IKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 169 ~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
+.. .....|+.++++++..++||++-+ +.+++++..++..|+|+|.++
T Consensus 143 ---G~~-------------g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 143 ---GHI-------------GKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp ---EEC-------------CSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred ---CCC-------------CCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEec
Confidence 000 011127889999998899988765 567999999999999999996
No 444
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=93.44 E-value=0.59 Score=44.70 Aligned_cols=117 Identities=10% Similarity=-0.027 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHcCCCEEEE-ecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEEEe
Q 018919 137 VVAQLVRRAERAGFKAIAL-TVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVKGV 212 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i-~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK~v 212 (349)
.+.+.++++.+.|++.+-+ -++.+. .+++. .+.++.+|+.+ +.++.+..-
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~--------------------------~~~~~d~e~v~avR~a~G~d~~l~vDaN 213 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKAD--------------------------WSTKEVAYYLRELRGILGHDTDMMVDYL 213 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCC--------------------------CCHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCc--------------------------cCHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 3445667777889999877 343110 01222 56789999887 578887642
Q ss_pred --c-CHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCE
Q 018919 213 --L-TAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASG 284 (349)
Q Consensus 213 --~-~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~ 284 (349)
- +.++| +.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.+..|+.++++.| +|.
T Consensus 214 ~~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~d~ 283 (394)
T 3mkc_A 214 YRFTDWYEVARLLNSIEDLELYFAEA--------TLQHDDLSGHAKLVENT--RSRICGAEMSTTRFEAEEWITKGKVHL 283 (394)
T ss_dssp TCCCCHHHHHHHHHHTGGGCCSEEES--------CSCTTCHHHHHHHHHHC--SSCBEECTTCCHHHHHHHHHHTTCCSE
T ss_pred CCCCCHHHHHHHHHHhhhcCCeEEEC--------CCCchhHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHcCCCCe
Confidence 3 56654 4455678877631 11223567778888776 79999999999999999999986 899
Q ss_pred EEEch
Q 018919 285 IFIGR 289 (349)
Q Consensus 285 V~ig~ 289 (349)
|++--
T Consensus 284 v~~k~ 288 (394)
T 3mkc_A 284 LQSDY 288 (394)
T ss_dssp ECCCT
T ss_pred EecCc
Confidence 99853
No 445
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=93.43 E-value=1.3 Score=41.17 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=75.4
Q ss_pred cCHHHHHHHH-HcCCCEEEEec---CCCCCCCCchhh----HHHHHHHHHHhcCCCcEEEec------------------
Q 018919 213 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPAT----IMALEEVVKATQGRIPVFLDG------------------ 266 (349)
Q Consensus 213 ~~~~~a~~a~-~~G~d~I~v~~---~gg~~~~~~~~~----~~~l~~i~~~~~~~ipvia~G------------------ 266 (349)
.+|++|.... +.|+|.+-++. ||-.... +.+. ++.|.+|.+.+ ++|++.=|
T Consensus 153 TdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~-~~p~~~L~~~~L~~I~~~~--~vpLVlHGgSsvp~~~~~~~~~~gg~ 229 (323)
T 2isw_A 153 TEPQDAKKFVELTGVDALAVAIGTSHGAYKFK-SESDIRLAIDRVKTISDLT--GIPLVMHGSSSVPKDVKDMINKYGGK 229 (323)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCC-C----CCCCHHHHHHHHHH--CSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCC-CCcccccCHHHHHHHHHHh--CCCeEEECCCCCCHHHHHHHHHhccc
Confidence 5688887766 69999999873 5544322 3333 68899999888 79999999
Q ss_pred -----CCCCHHHHHHHHHhCCCEEEEchHHHHHHhh-------cC------HHHHHHHHHHHHHHHHHHHHHcCCC
Q 018919 267 -----GVRRGTDVFKALALGASGIFIGRPVVYSLAA-------EG------EKGVRRVLEMLREEFELAMALSGCR 324 (349)
Q Consensus 267 -----GI~~~~dv~kal~~GA~~V~ig~~~l~~~~~-------~G------~~gv~~~l~~l~~el~~~m~~~G~~ 324 (349)
|+. -+++.+++.+|..-|=|+|-+-++... .. ..-+....+.+++.++..|..+|..
T Consensus 230 ~~~~~Gvp-~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 304 (323)
T 2isw_A 230 MPDAVGVP-IESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSA 304 (323)
T ss_dssp CTTCBCCC-HHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cccCCCCC-HHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 443 378999999999999999976544321 11 1123344567777888888888864
No 446
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.40 E-value=0.26 Score=48.91 Aligned_cols=236 Identities=16% Similarity=0.170 Sum_probs=113.3
Q ss_pred HhhcccccccccccC-CCCCCCcceeEc-CeecCcceeecccccccccCChhhHHHHHHHHHcCCeEEecCCCCCCHHHH
Q 018919 40 RNAFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV 117 (349)
Q Consensus 40 ~~~~~~~~l~p~~l~-~~~~~d~s~~l~-g~~~~~Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~~~~~~~~~e~i 117 (349)
-.+||++.|+|..-. ..+++|++|.+- ++++..||+.|||..++ |..||.+.++.|..+++. .++++|+.
T Consensus 59 GLTfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTVT------e~~MAIamAr~GGiGvIH--~n~sie~Q 130 (556)
T 4af0_A 59 GLTYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTVT------EDRMAIALALHGGLGIIH--HNCSAEEQ 130 (556)
T ss_dssp SCCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTTTC------SHHHHHHHHHTTCEEEEC--CSSCHHHH
T ss_pred CCChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCccccc------CHHHHHHHHHCCCeEEEc--CCCCHHHH
Confidence 358999999998653 346899999995 79999999999997654 779999999999999995 44677764
Q ss_pred Hhh----CC-CceEEEEeecCChhH-HHHHHHHHHHcCCCEEEEecCCCCC----C-chhHHhhhh---------c----
Q 018919 118 AST----GP-GIRFFQLYVYKDRNV-VAQLVRRAERAGFKAIALTVDTPRL----G-RREADIKNR---------F---- 173 (349)
Q Consensus 118 ~~~----~~-~~~~~Ql~~~~~~~~-~~~~~~~~~~~G~~~i~i~~d~p~~----g-~r~~d~~~~---------~---- 173 (349)
++. +. ...|+.=...-.++. +.+..+...+.+..++.++-+.... | ...||++.. +
T Consensus 131 a~~V~~VKr~e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT~~l 210 (556)
T 4af0_A 131 AAMVRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTTEV 210 (556)
T ss_dssp HHHHHHHHHCCC--------------------------------------------------------------------
T ss_pred HHHHHHHHhcccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhcccce
Confidence 321 11 111221000112333 3344444455566666554332110 1 011333211 0
Q ss_pred -CCCCcCcccccCC-----------CCCCch-H---HHHHHHHHhcCCc------------EEEEEecC---HHHHHHHH
Q 018919 174 -TLPPFLTLKNFQG-----------LDLGKM-D---EDVKWLQTITKLP------------ILVKGVLT---AEDARIAV 222 (349)
Q Consensus 174 -~~p~~~~~~~~~~-----------~~~~~~-~---~~i~~i~~~~~~p------------v~vK~v~~---~~~a~~a~ 222 (349)
..|.+.+...... ..|.+. + -.++.+.+...-| +.+-.-.+ .+-+..+.
T Consensus 211 vt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~VgAAVgv~~d~~eR~~aLv 290 (556)
T 4af0_A 211 VTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDRLKLLA 290 (556)
T ss_dssp -----------------------------------------------CTTCCBCTTTCCBCCEEEECSSHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCcchhcchhhceeeEEEeccCccHHHHHHHHH
Confidence 0011111100000 000000 0 0011111111111 11111122 35578889
Q ss_pred HcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 223 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 223 ~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
++|+|.|++...-|+ ....++.+..+++.. .+++|| .|.|.|++-+...+..|||+|-+|-
T Consensus 291 ~AGvD~iviD~ahGh----s~~v~~~i~~ik~~~-p~~~vi-aGNVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 291 EAGLDVVVLDSSQGN----SVYQIEFIKWIKQTY-PKIDVI-AGNVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HTTCCEEEECCSCCC----SHHHHHHHHHHHHHC-TTSEEE-EEEECSHHHHHHHHHHTCSEEEECS
T ss_pred hcCCcEEEEeccccc----cHHHHHHHHHHHhhC-CcceEE-eccccCHHHHHHHHHcCCCEEeecC
Confidence 999999999754332 233567788887765 367766 5779999999888889999998774
No 447
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=93.27 E-value=0.92 Score=40.95 Aligned_cols=117 Identities=17% Similarity=0.227 Sum_probs=79.5
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVK 210 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK 210 (349)
..|.+...+.++++.++|++++-...-.| |. .|- .+.|. ... ++.+++++++.++|++.
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fkp----rt--------s~~-----~~~g~--~~egl~~l~~~~~~~Gl~~~t- 92 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFKP----RT--------SPY-----SFQGY--GEKALRWMREAADEYGLVTVT- 92 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSCC----CS--------STT-----SCCCC--THHHHHHHHHHHHHHTCEEEE-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeccc----CC--------Ccc-----cccCc--cHHHHHHHHHHHHHcCCcEEE-
Confidence 35778889999999999999875433222 10 010 01111 122 56788888888999986
Q ss_pred EecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCC-CHHHHHHHHH
Q 018919 211 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR-RGTDVFKALA 279 (349)
Q Consensus 211 ~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~-~~~dv~kal~ 279 (349)
.+.+++.+..+.+. +|.+.+... . ......+.++.+ . +.||+..-|.. +.+++..|++
T Consensus 93 e~~d~~~~~~l~~~-vd~~kIga~---~----~~n~~ll~~~a~-~--~kPV~lk~G~~~t~~e~~~Av~ 151 (262)
T 1zco_A 93 EVMDTRHVELVAKY-SDILQIGAR---N----SQNFELLKEVGK-V--ENPVLLKRGMGNTIQELLYSAE 151 (262)
T ss_dssp ECCCGGGHHHHHHH-CSEEEECGG---G----TTCHHHHHHHTT-S--SSCEEEECCTTCCHHHHHHHHH
T ss_pred eeCCHHhHHHHHhh-CCEEEECcc---c----ccCHHHHHHHHh-c--CCcEEEecCCCCCHHHHHHHHH
Confidence 56788888889999 999999432 1 112445666554 2 79999999998 9999988774
No 448
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=93.26 E-value=0.83 Score=39.18 Aligned_cols=41 Identities=24% Similarity=0.447 Sum_probs=35.6
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEec
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
|+.++++++..++|+++-+-.+++++..+.++|+|+|.++.
T Consensus 151 ~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 151 LEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp HHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTTCSEEEESH
T ss_pred HHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcCCCEEEEhH
Confidence 78899998888999988776669999999999999999853
No 449
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=93.23 E-value=0.75 Score=44.22 Aligned_cols=139 Identities=12% Similarity=0.019 Sum_probs=86.5
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCC---ch-HHHHHHHHHhc--CCcE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG---KM-DEDVKWLQTIT--KLPI 207 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~---~~-~~~i~~i~~~~--~~pv 207 (349)
+++.+.+.++++.+.|++++-+.+..+..+. ......+...|.. +.. ..+. ++ .+.++.+|+.+ +.+|
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~-~~~~~pG~~~~~~---~~~--~~~~~~~~~~~e~v~avR~avG~d~~l 216 (409)
T 3go2_A 143 DLDGVKRTAEEARERQFRAIKTNIFIHDDGP-LHAWRPGFAVPFQ---PAL--NVDRKVLRNLRAHLEALRDGAGPDVEI 216 (409)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCEECSSSS-CEECBGGGTBSCC---TTC--CCCHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccccccccc-ccccccCCCccCC---ccc--ccchHHHHHHHHHHHHHHHHhCCCCEE
Confidence 5677777888888899999988772211000 0000000000000 000 0011 12 46789999987 5788
Q ss_pred EEEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC
Q 018919 208 LVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 281 (349)
Q Consensus 208 ~vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G 281 (349)
.+..- -+.++| +.+.+.|++.|-.- ...++.+.++++.+ .+||++++.+.+..|+.++++.|
T Consensus 217 ~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P----------~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 284 (409)
T 3go2_A 217 LLDLNFNAKPEGYLKILRELADFDLFWVEID----------SYSPQGLAYVRNHS--PHPISSCETLFGIREFKPFFDAN 284 (409)
T ss_dssp EEECTTCSCHHHHHHHHHHTTTSCCSEEECC----------CSCHHHHHHHHHTC--SSCEEECTTCCHHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHhhcCCeEEEeC----------cCCHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHhC
Confidence 88642 355554 44556788877531 12567777887766 79999999999999999999987
Q ss_pred -CCEEEEchH
Q 018919 282 -ASGIFIGRP 290 (349)
Q Consensus 282 -A~~V~ig~~ 290 (349)
+|.|++--.
T Consensus 285 ~~d~v~~k~~ 294 (409)
T 3go2_A 285 AVDVAIVDTI 294 (409)
T ss_dssp CCSEEEECHH
T ss_pred CCCEEEeCCC
Confidence 799988653
No 450
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=93.21 E-value=0.69 Score=42.55 Aligned_cols=85 Identities=27% Similarity=0.287 Sum_probs=58.2
Q ss_pred HHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEec--------CCCCCCCCchhhHHHHHHHHHHhcCCCcEEEe
Q 018919 194 EDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVFLD 265 (349)
Q Consensus 194 ~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~--------~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~ 265 (349)
...+.+.+..+.++++ .+...+.|+.+.++|+|+|.+-+ .+|. ......+.+.++++.+ ++||++
T Consensus 11 ~~~~~~~~~~~~g~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~---~~~~~~~~i~~I~~~~--~iPv~~- 83 (305)
T 2nv1_A 11 RVKRGMAEMQKGGVIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGV---ARMADPTIVEEVMNAV--SIPVMA- 83 (305)
T ss_dssp HHHHHHHHTTTTCEEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCC---CCCCCHHHHHHHHHHC--SSCEEE-
T ss_pred HHHHHHHHHccCCeee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCc---ccCCCHHHHHHHHHhC--CCCEEe-
Confidence 3344455556777877 66778999999999999994322 1111 0122456777887766 789984
Q ss_pred cCCCC--HHHHHHHHHhCCCEEE
Q 018919 266 GGVRR--GTDVFKALALGASGIF 286 (349)
Q Consensus 266 GGI~~--~~dv~kal~~GA~~V~ 286 (349)
+++. .+++-.++++|||+|.
T Consensus 84 -k~r~g~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 84 -KARIGHIVEARVLEAMGVDYID 105 (305)
T ss_dssp -EECTTCHHHHHHHHHHTCSEEE
T ss_pred -cccccchHHHHHHHHCCCCEEE
Confidence 5555 6677778889999997
No 451
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=93.14 E-value=0.68 Score=43.81 Aligned_cols=60 Identities=7% Similarity=0.029 Sum_probs=44.8
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 215 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 215 ~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
.+.++.+.+.|+|.|.++ ++ .+..+.+.++++. +++|+. .+.+.+++.++...|+|+|.+
T Consensus 112 ~~~~~~~~~~g~~~V~~~--~g------~~~~~~i~~~~~~---g~~v~~--~v~t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFH--FG------VPDREVIARLRRA---GTLTLV--TATTPEEARAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHHHHHSCCSEEEEE--SS------CCCHHHHHHHHHT---TCEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEEe--CC------CCcHHHHHHHHHC---CCeEEE--ECCCHHHHHHHHHcCCCEEEE
Confidence 456788999999999883 33 1234555555542 577776 488999999999999999999
No 452
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=93.14 E-value=0.74 Score=39.80 Aligned_cols=40 Identities=23% Similarity=0.239 Sum_probs=31.3
Q ss_pred HHHHHHHHHhc-----CCcEEEEEecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTIT-----KLPILVKGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~-----~~pv~vK~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++.++++++.. +.|+++-+-.+++++..+.++|+|+++++
T Consensus 154 ~~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 154 LEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAG 198 (220)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcCCCEEEEC
Confidence 45677777655 68887766666888888999999999995
No 453
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=93.01 E-value=0.59 Score=44.10 Aligned_cols=88 Identities=16% Similarity=0.172 Sum_probs=58.6
Q ss_pred HHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHH
Q 018919 116 EVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDED 195 (349)
Q Consensus 116 ~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (349)
.+++..+.|.++.... + .+.+++++++|+++|.++- + |.|. .. ..+..++.
T Consensus 211 ~lr~~~~~PvivK~v~--~----~e~A~~a~~~GaD~I~vsn-~---GG~~---------~d----------~~~~~~~~ 261 (352)
T 3sgz_A 211 LLQSITRLPIILKGIL--T----KEDAELAMKHNVQGIVVSN-H---GGRQ---------LD----------EVSASIDA 261 (352)
T ss_dssp HHHHHCCSCEEEEEEC--S----HHHHHHHHHTTCSEEEECC-G---GGTS---------SC----------SSCCHHHH
T ss_pred HHHHhcCCCEEEEecC--c----HHHHHHHHHcCCCEEEEeC-C---CCCc---------cC----------CCccHHHH
Confidence 3444444566665432 2 3567889999999998742 1 1110 00 01222677
Q ss_pred HHHHHHhc--CCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 196 VKWLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 196 i~~i~~~~--~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
+.++++.. ++||++-+ +.+.+++.+++.+|||+|.+.
T Consensus 262 L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 262 LREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLG 301 (352)
T ss_dssp HHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 88887776 68987654 689999999999999999984
No 454
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=93.01 E-value=3.7 Score=38.32 Aligned_cols=151 Identities=15% Similarity=0.098 Sum_probs=83.6
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEec-C-CCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhc-CCcEEEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTV-D-TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTIT-KLPILVK 210 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~-d-~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~pv~vK 210 (349)
+.+...+.++.+.++|++.|++.- + .|.. .|. . +....+.|+.++.+++.. +.|+.+=
T Consensus 28 ~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~s------------sp~-~------g~~~~~~~e~l~~i~~~~~~~~i~~l 88 (345)
T 1nvm_A 28 TLDDVRAIARALDKAKVDSIEVAHGDGLQGS------------SFN-Y------GFGRHTDLEYIEAVAGEISHAQIATL 88 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECSCTTSTTCC------------BTT-T------BCCSSCHHHHHHHHHTTCSSSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCC------------CCc-c------cCCCCCHHHHHHHHHhhCCCCEEEEE
Confidence 456677888999999999999741 1 1210 011 0 011122378888888764 5677654
Q ss_pred Ee---cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHH----HHHh
Q 018919 211 GV---LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFK----ALAL 280 (349)
Q Consensus 211 ~v---~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~---GGI~~~~dv~k----al~~ 280 (349)
+. ...++++.+.++|+|.+.+..+-. ......+.+..+++. .+.+++. ..-.+.+.+.+ +..+
T Consensus 89 ~~p~~~~~~~i~~a~~aGvd~v~I~~~~s----~~~~~~~~i~~ak~~---G~~v~~~~~~a~~~~~e~~~~ia~~~~~~ 161 (345)
T 1nvm_A 89 LLPGIGSVHDLKNAYQAGARVVRVATHCT----EADVSKQHIEYARNL---GMDTVGFLMMSHMIPAEKLAEQGKLMESY 161 (345)
T ss_dssp ECBTTBCHHHHHHHHHHTCCEEEEEEETT----CGGGGHHHHHHHHHH---TCEEEEEEESTTSSCHHHHHHHHHHHHHH
T ss_pred ecCCcccHHHHHHHHhCCcCEEEEEEecc----HHHHHHHHHHHHHHC---CCEEEEEEEeCCCCCHHHHHHHHHHHHHC
Confidence 22 367899999999999999864311 111223333333332 2333322 43344444443 3337
Q ss_pred CCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018919 281 GASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 314 (349)
Q Consensus 281 GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el 314 (349)
||+.|.+.--. +..-+..+.++++.+++++
T Consensus 162 Ga~~i~l~DT~----G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 162 GATCIYMADSG----GAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp TCSEEEEECTT----CCCCHHHHHHHHHHHHHHS
T ss_pred CCCEEEECCCc----CccCHHHHHHHHHHHHHhc
Confidence 99998876421 0111444555555555543
No 455
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=92.99 E-value=0.27 Score=44.07 Aligned_cols=40 Identities=8% Similarity=0.124 Sum_probs=31.9
Q ss_pred HHHHHHHHHhc-----CCcEEEEEecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTIT-----KLPILVKGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~-----~~pv~vK~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++.|+++|+.. +.+|.+-+-.+++.+..+.++|||.+++.
T Consensus 179 l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~G 223 (246)
T 3inp_A 179 LDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAG 223 (246)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEES
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEe
Confidence 56677776643 47887777778899999999999999984
No 456
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=92.93 E-value=0.49 Score=42.53 Aligned_cols=71 Identities=27% Similarity=0.319 Sum_probs=53.4
Q ss_pred ecCHHHHHHHHHcCCCEEEEecC---CCCCCCCchhhHHHHHHHHHHhcCCCcEEE-----ecCCCCH--------HHHH
Q 018919 212 VLTAEDARIAVQAGAAGIIVSNH---GARQLDYVPATIMALEEVVKATQGRIPVFL-----DGGVRRG--------TDVF 275 (349)
Q Consensus 212 v~~~~~a~~a~~~G~d~I~v~~~---gg~~~~~~~~~~~~l~~i~~~~~~~ipvia-----~GGI~~~--------~dv~ 275 (349)
+.+.++|..|.+.|||-|-+-.. ||. .|+...+..+++.+ ++||.+ .|+.... +|+.
T Consensus 8 ~~s~~~a~~A~~~GAdRIELc~~L~~GGl-----TPS~g~i~~~~~~~--~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~ 80 (256)
T 1twd_A 8 CYSMECALTAQQNGADRVELCAAPKEGGL-----TPSLGVLKSVRQRV--TIPVHPIIRPRGGDFCYSDGEFAAILEDVR 80 (256)
T ss_dssp ESSHHHHHHHHHTTCSEEEECBCGGGTCB-----CCCHHHHHHHHHHC--CSCEEEBCCSSSSCSCCCHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHcCCCEEEEcCCcccCCC-----CCCHHHHHHHHHHc--CCceEEEECCCCCCCcCCHHHHHHHHHHHH
Confidence 37899999999999999998543 332 35566777777776 688876 3555444 3777
Q ss_pred HHHHhCCCEEEEch
Q 018919 276 KALALGASGIFIGR 289 (349)
Q Consensus 276 kal~~GA~~V~ig~ 289 (349)
.+.++|||+|.+|-
T Consensus 81 ~~~~~GadGvV~G~ 94 (256)
T 1twd_A 81 TVRELGFPGLVTGV 94 (256)
T ss_dssp HHHHTTCSEEEECC
T ss_pred HHHHcCCCEEEEee
Confidence 78889999999994
No 457
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=92.86 E-value=0.51 Score=43.80 Aligned_cols=84 Identities=13% Similarity=-0.045 Sum_probs=52.8
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKG 211 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~ 211 (349)
.+.+...+.+++..+.|++.|.|+..+..+|...++- .++... +.+ ....|+.+++.+++||.+ .
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~--------~V~~~e-----E~~Rv~pvI~~l~~~~~vpISI-D 111 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTD--------SPSTQI-----ELDRLLPVIDAIKKRFPQLISV-D 111 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-------------CHHHHH-----HHHHHHHHHHHHHHHCCSEEEE-E
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccC--------CCCHHH-----HHHHHHHHHHHHHhhCCCeEEE-e
Confidence 3667777788888899999999887554332110000 000000 000 124577777778999987 5
Q ss_pred ecCHHHHHHHHHcCCCEEE
Q 018919 212 VLTAEDARIAVQAGAAGII 230 (349)
Q Consensus 212 v~~~~~a~~a~~~G~d~I~ 230 (349)
...++.++.|+++|++.|-
T Consensus 112 T~~~~Va~aAl~aGa~iIN 130 (314)
T 3tr9_A 112 TSRPRVMREAVNTGADMIN 130 (314)
T ss_dssp CSCHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHcCCCEEE
Confidence 6788999999999998663
No 458
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=92.84 E-value=4.8 Score=35.61 Aligned_cols=122 Identities=20% Similarity=0.201 Sum_probs=89.5
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-h-HHHHHHHHHhcCCcEEEEEecCHH
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-M-DEDVKWLQTITKLPILVKGVLTAE 216 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~-~~~i~~i~~~~~~pv~vK~v~~~~ 216 (349)
.+.+..++++|+++|.+|+-- |.. . .+++..+++..+.|+=+-+..+.|
T Consensus 28 v~aA~~ae~aGAdgITvHlRe-----------------------------DrRHI~d~Dv~~L~~~~~~~lNlE~a~t~e 78 (243)
T 1m5w_A 28 VQAAFIAEQAGADGITVHLRE-----------------------------DRRHITDRDVRILRQTLDTRMNLEMAVTEE 78 (243)
T ss_dssp HHHHHHHHTTTCSEEEEECCT-----------------------------TCSSSCHHHHHHHHHHCSSEEEEEECSSHH
T ss_pred HHHHHHHHHcCCCEEEeCCCC-----------------------------CcccCCHHHHHHHHHhcCCCEEeccCCCHH
Confidence 456777889999999998732 222 2 577999998888999888889999
Q ss_pred HHHHHHHcCCCEEEEecCCCCC------CCCchhhHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHhCCCEEEE
Q 018919 217 DARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~------~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~dv~kal~~GA~~V~i 287 (349)
....+.+.-.+.+++-.-..-+ +|. ....+.|..+.+.++ -++.++.+- +.+++-.|.+.||+.|=+
T Consensus 79 mi~ia~~~kP~~vtLVPE~r~e~TTegGldv-~~~~~~l~~~i~~L~~~GIrVSLFIDp---d~~qi~aA~~~GA~~IEL 154 (243)
T 1m5w_A 79 MLAIAVETKPHFCCLVPEKRQEVTTEGGLDV-AGQRDKMRDACKRLADAGIQVSLFIDA---DEEQIKAAAEVGAPFIEI 154 (243)
T ss_dssp HHHHHHHHCCSEEEECCCCSSCSSCCSCCCS-GGGHHHHHHHHHHHHHTTCEEEEEECS---CHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEECCCCCCCcCCCcchhH-HhhHHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHhCcCEEEE
Confidence 9999999999999986421111 222 234555656555543 257788874 578898899999999999
Q ss_pred chHHHH
Q 018919 288 GRPVVY 293 (349)
Q Consensus 288 g~~~l~ 293 (349)
-+--+-
T Consensus 155 hTG~Ya 160 (243)
T 1m5w_A 155 HTGCYA 160 (243)
T ss_dssp ECHHHH
T ss_pred echhhh
Confidence 986553
No 459
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=92.80 E-value=0.63 Score=45.30 Aligned_cols=147 Identities=12% Similarity=-0.006 Sum_probs=86.5
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCC-c-hhHHhhhhcCCCCcCc---cccc--CC-CCC----Cch-HHHHHHH
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLG-R-READIKNRFTLPPFLT---LKNF--QG-LDL----GKM-DEDVKWL 199 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g-~-r~~d~~~~~~~p~~~~---~~~~--~~-~~~----~~~-~~~i~~i 199 (349)
.+++.+.+.++++.+.|++++-+.++..... . -.+........+.+.. .+.. .+ ..+ .+. .+.++.+
T Consensus 154 ~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~av 233 (440)
T 3t6c_A 154 ADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDHL 233 (440)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHH
Confidence 5677777888888889999998877532100 0 0000000000000000 0000 00 001 112 4568889
Q ss_pred HHhc--CCcEEEEEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCH
Q 018919 200 QTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 271 (349)
Q Consensus 200 ~~~~--~~pv~vK~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~ 271 (349)
|+.+ +++|.+..- -+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||+++.-+.+.
T Consensus 234 R~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~ 303 (440)
T 3t6c_A 234 RNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLED--------PVAPENTEWLKMLRQQS--STPIAMGELFVNV 303 (440)
T ss_dssp HHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC--------SSCGGGGGGHHHHHHHC--CSCEEECTTCCSH
T ss_pred HHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEEC--------CCChhhHHHHHHHHhhc--CCCEEeCcccCCH
Confidence 9987 578887653 355554 4455677776631 01123456677777776 7999999999999
Q ss_pred HHHHHHHHhC-CCEEEEch
Q 018919 272 TDVFKALALG-ASGIFIGR 289 (349)
Q Consensus 272 ~dv~kal~~G-A~~V~ig~ 289 (349)
.|+.++++.| +|.|++--
T Consensus 304 ~~~~~~i~~~a~d~v~~k~ 322 (440)
T 3t6c_A 304 NEWKPLIDNKLIDYIRCHI 322 (440)
T ss_dssp HHHHHHHHTTCCSEECCCG
T ss_pred HHHHHHHHcCCccceeech
Confidence 9999999986 79988864
No 460
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=92.77 E-value=5.3 Score=35.95 Aligned_cols=122 Identities=20% Similarity=0.183 Sum_probs=87.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCc-h-HHHHHHHHHhcCCcEEEEEecCHH
Q 018919 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGK-M-DEDVKWLQTITKLPILVKGVLTAE 216 (349)
Q Consensus 139 ~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~-~-~~~i~~i~~~~~~pv~vK~v~~~~ 216 (349)
.+.+..++++|+++|.+|+-- |.. . .+++..+++..+.|+=+-+..+.|
T Consensus 56 v~aA~~ae~aGAdGITvHlRe-----------------------------DrRHI~d~Dv~~L~~~i~t~lNlEma~t~e 106 (278)
T 3gk0_A 56 VRAALAAEDAGADAITLHLRE-----------------------------DRRHIVDADVRTLRPRVKTRMNLECAVTPE 106 (278)
T ss_dssp HHHHHHHHHTTCSEEEEECCT-----------------------------TCSSSCHHHHHHHHHHCSSCEEEEECSSHH
T ss_pred HHHHHHHHHcCCCEEEeccCC-----------------------------CcccCCHHHHHHHHHHcCCCEEeecCCCHH
Confidence 456677889999999998732 221 2 477999999889999888889999
Q ss_pred HHHHHHHcCCCEEEEecCCCCC--CCCc---hhhHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHhCCCEEEEc
Q 018919 217 DARIAVQAGAAGIIVSNHGARQ--LDYV---PATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIG 288 (349)
Q Consensus 217 ~a~~a~~~G~d~I~v~~~gg~~--~~~~---~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~dv~kal~~GA~~V~ig 288 (349)
....+.+.-.+.+++-.-..-+ -++| ....+.|.++.+.++ -++.++.+ -+.+++..|.++||+.|=+-
T Consensus 107 mi~ial~~kP~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFID---pd~~qI~aA~~~GAd~IELh 183 (278)
T 3gk0_A 107 MLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFID---PDEAQIRAAHETGAPVIELH 183 (278)
T ss_dssp HHHHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEEC---SCHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHcCCCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHhCcCEEEEe
Confidence 9999999999999986321111 1122 223455555554442 25688887 45788888999999999998
Q ss_pred hHHH
Q 018919 289 RPVV 292 (349)
Q Consensus 289 ~~~l 292 (349)
+--+
T Consensus 184 TG~Y 187 (278)
T 3gk0_A 184 TGRY 187 (278)
T ss_dssp CHHH
T ss_pred cchh
Confidence 7554
No 461
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=92.76 E-value=0.51 Score=44.73 Aligned_cols=65 Identities=14% Similarity=0.135 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCH
Q 018919 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTA 215 (349)
Q Consensus 136 ~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~ 215 (349)
+...++++.++++|++.|.++... . .+ +.++++|+.+++||++-+-.++
T Consensus 242 ~~~~~la~~l~~~Gvd~i~v~~~~--~--------------------------~~---~~~~~ik~~~~iPvi~~Ggit~ 290 (362)
T 4ab4_A 242 ETFTYVARELGKRGIAFICSRERE--A--------------------------DD---SIGPLIKEAFGGPYIVNERFDK 290 (362)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC--C--------------------------TT---CCHHHHHHHHCSCEEEESSCCH
T ss_pred HHHHHHHHHHHHhCCCEEEECCCC--C--------------------------CH---HHHHHHHHHCCCCEEEeCCCCH
Confidence 345678889999999998875432 0 00 1367778888999987665599
Q ss_pred HHHHHHHHcC-CCEEEE
Q 018919 216 EDARIAVQAG-AAGIIV 231 (349)
Q Consensus 216 ~~a~~a~~~G-~d~I~v 231 (349)
++|+.+++.| +|.|.+
T Consensus 291 e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 291 ASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHcCCccEEEE
Confidence 9999999998 999988
No 462
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=92.67 E-value=3.2 Score=37.64 Aligned_cols=131 Identities=19% Similarity=0.107 Sum_probs=78.2
Q ss_pred eEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc
Q 018919 125 RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT 203 (349)
Q Consensus 125 ~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~ 203 (349)
..+.|.. .+.+...+.++.+.+.|+|++++.+|.-.. + .+.+. .+.++.+|+.+
T Consensus 42 i~v~l~~-~~~~e~~~~~~~~~~~gaD~VElRvD~l~~-------------~-----------~~~~~v~~~l~~lr~~~ 96 (276)
T 3o1n_A 42 IIVSLMG-KTITDVKSEALAYREADFDILEWRVDHFAN-------------V-----------TTAESVLEAAGAIREII 96 (276)
T ss_dssp EEEEECC-SSHHHHHHHHHHHTTSCCSEEEEEGGGCTT-------------T-----------TCHHHHHHHHHHHHHHC
T ss_pred EEEEeCC-CCHHHHHHHHHHHhhCCCCEEEEEeccccc-------------c-----------CcHHHHHHHHHHHHHhc
Confidence 3455543 566666777777777899999999985210 0 01123 46688888887
Q ss_pred -CCcEEEEEec---------CH----HHHHHHHHcC-CCEEEEecCCCCCCCCchhhHHHHHHHHHH-hcCCCcEEEec-
Q 018919 204 -KLPILVKGVL---------TA----EDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKA-TQGRIPVFLDG- 266 (349)
Q Consensus 204 -~~pv~vK~v~---------~~----~~a~~a~~~G-~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~-~~~~ipvia~G- 266 (349)
++|+++-... +. +..+.+++.| +|+|.|--. ... +.+.++.+. .+.++.||++-
T Consensus 97 ~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~------~~~---~~~~~l~~~a~~~~~kvI~S~H 167 (276)
T 3o1n_A 97 TDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELF------TGD---DEVKATVGYAHQHNVAVIMSNH 167 (276)
T ss_dssp CSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGG------GCH---HHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECc------CCH---HHHHHHHHHHHhCCCEEEEEee
Confidence 7999986542 22 2356678889 999998421 111 234444332 12367777752
Q ss_pred ---CCCCHHHHH----HHHHhCCCEEEEch
Q 018919 267 ---GVRRGTDVF----KALALGASGIFIGR 289 (349)
Q Consensus 267 ---GI~~~~dv~----kal~~GA~~V~ig~ 289 (349)
+--+.+++. ++..+|||.|=+..
T Consensus 168 df~~tP~~~el~~~~~~~~~~GaDIvKia~ 197 (276)
T 3o1n_A 168 DFHKTPAAEEIVQRLRKMQELGADIPKIAV 197 (276)
T ss_dssp ESSCCCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCCCcCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 233334444 34457888776654
No 463
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=92.59 E-value=0.45 Score=45.42 Aligned_cols=69 Identities=13% Similarity=0.166 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCH
Q 018919 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTA 215 (349)
Q Consensus 136 ~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~ 215 (349)
+...++++.+++.|++.|.++..... . +. . + .+ ++++|+.+++||++-+-.++
T Consensus 266 ~~~~~la~~l~~~Gvd~i~v~~~~~~------------~-~~----------~-~--~~-~~~ir~~~~iPvi~~G~it~ 318 (379)
T 3aty_A 266 ALTKHLCKKIEPLSLAYLHYLRGDMV------------N-QQ----------I-G--DV-VAWVRGSYSGVKISNLRYDF 318 (379)
T ss_dssp HHHHHHHHHHGGGCCSEEEEECSCTT------------S-CC----------C-C--CH-HHHHHTTCCSCEEEESSCCH
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCcC------------C-CC----------c-c--HH-HHHHHHHCCCcEEEECCCCH
Confidence 44667888888999999987653210 0 00 0 1 26 88999999999987765599
Q ss_pred HHHHHHHHcC-CCEEEE
Q 018919 216 EDARIAVQAG-AAGIIV 231 (349)
Q Consensus 216 ~~a~~a~~~G-~d~I~v 231 (349)
++++.+++.| +|.|.+
T Consensus 319 ~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 319 EEADQQIREGKVDAVAF 335 (379)
T ss_dssp HHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHcCCCeEEEe
Confidence 9999999998 999988
No 464
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=92.44 E-value=1 Score=42.20 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=33.8
Q ss_pred HHHHHHHHHhc-CCcEEEE-EecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTIT-KLPILVK-GVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~-~~pv~vK-~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++.|+++++.. ++||++- ++.+++++.+++.+|||+|.+.
T Consensus 239 ~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 239 AASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMA 280 (349)
T ss_dssp HHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 67788888876 8998764 4689999999999999999984
No 465
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=92.43 E-value=0.62 Score=41.12 Aligned_cols=40 Identities=30% Similarity=0.415 Sum_probs=34.0
Q ss_pred HHHHHHHHHhc-CCcEEEEEecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~-~~pv~vK~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++.++++|+.. +.|+.+-+-.+++.+..+.++|||.+++.
T Consensus 157 l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvG 197 (228)
T 3ovp_A 157 MPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSG 197 (228)
T ss_dssp HHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEe
Confidence 67788888876 57887777778999999999999999984
No 466
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=92.40 E-value=0.69 Score=43.92 Aligned_cols=89 Identities=18% Similarity=0.177 Sum_probs=58.3
Q ss_pred HHHHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHH
Q 018919 115 EEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDE 194 (349)
Q Consensus 115 e~i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~ 194 (349)
+.+++..+.+.++... . +.+.+++++++|+++|.++- . |.|. .. ..+..++
T Consensus 222 ~~lr~~~~~PvivK~v--~----~~e~a~~a~~~Gad~I~vs~-~---ggr~---------~~----------~g~~~~~ 272 (368)
T 2nli_A 222 EEIAGHSGLPVFVKGI--Q----HPEDADMAIKRGASGIWVSN-H---GARQ---------LY----------EAPGSFD 272 (368)
T ss_dssp HHHHHHSSSCEEEEEE--C----SHHHHHHHHHTTCSEEEECC-G---GGTS---------CS----------SCCCHHH
T ss_pred HHHHHHcCCCEEEEcC--C----CHHHHHHHHHcCCCEEEEcC-C---CcCC---------CC----------CCCChHH
Confidence 3344444455555432 1 24567889999999998732 1 1110 00 0122377
Q ss_pred HHHHHHHhc--CCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 195 DVKWLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 195 ~i~~i~~~~--~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
.+.++++.. ++||++=+ +.+.+++.+++.+|||+|.+.
T Consensus 273 ~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 273 TLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp HHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 788888877 69987654 689999999999999999984
No 467
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=92.23 E-value=3 Score=37.86 Aligned_cols=125 Identities=20% Similarity=0.241 Sum_probs=84.8
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVK 210 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK 210 (349)
..+.+...+.++++.++|++++-...-.|.. .| ..+.+. ... ++.++++++..++|++.
T Consensus 48 ~~~~e~a~~~a~~~k~~ga~~~k~~~~kprt------------s~-----~~f~g~--g~~gl~~l~~~~~~~Gl~~~t- 107 (276)
T 1vs1_A 48 VESWEQVREAALAVKEAGAHMLRGGAFKPRT------------SP-----YSFQGL--GLEGLKLLRRAGDEAGLPVVT- 107 (276)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECBSSCCCS------------ST-----TSCCCC--THHHHHHHHHHHHHHTCCEEE-
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEeEEEeCCC------------Ch-----hhhcCC--CHHHHHHHHHHHHHcCCcEEE-
Confidence 4577888899999999999986543322211 01 011111 122 67788888889999986
Q ss_pred EecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCC-CHHHHHHHHH----hCCCEE
Q 018919 211 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR-RGTDVFKALA----LGASGI 285 (349)
Q Consensus 211 ~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~-~~~dv~kal~----~GA~~V 285 (349)
.+.+++.+..+.+. +|.+.+...- ......+.++.+. +.||+..-|.. +.+|+..|+. .|..-+
T Consensus 108 e~~d~~~~~~l~~~-vd~~kIgs~~-------~~n~~ll~~~a~~---~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i 176 (276)
T 1vs1_A 108 EVLDPRHVETVSRY-ADMLQIGARN-------MQNFPLLREVGRS---GKPVLLKRGFGNTVEELLAAAEYILLEGNWQV 176 (276)
T ss_dssp ECCCGGGHHHHHHH-CSEEEECGGG-------TTCHHHHHHHHHH---TCCEEEECCTTCCHHHHHHHHHHHHHTTCCCE
T ss_pred ecCCHHHHHHHHHh-CCeEEECccc-------ccCHHHHHHHHcc---CCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 57788888889999 9999994321 1134566666543 78999999997 8888877665 476444
Q ss_pred EE
Q 018919 286 FI 287 (349)
Q Consensus 286 ~i 287 (349)
.+
T Consensus 177 ~L 178 (276)
T 1vs1_A 177 VL 178 (276)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 468
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=92.22 E-value=0.65 Score=43.99 Aligned_cols=65 Identities=17% Similarity=0.118 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCH
Q 018919 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTA 215 (349)
Q Consensus 136 ~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~ 215 (349)
+...++++.++++|++.|.++... . .+ +.++++|+.+++||++-+-.++
T Consensus 250 ~~~~~la~~l~~~Gvd~i~v~~~~--~--------------------------~~---~~~~~ik~~~~iPvi~~Ggit~ 298 (361)
T 3gka_A 250 ATFGHVARELGRRRIAFLFARESF--G--------------------------GD---AIGQQLKAAFGGPFIVNENFTL 298 (361)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC--S--------------------------TT---CCHHHHHHHHCSCEEEESSCCH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC--C--------------------------CH---HHHHHHHHHcCCCEEEeCCCCH
Confidence 345678899999999998875432 0 01 2367788888999887665699
Q ss_pred HHHHHHHHcC-CCEEEE
Q 018919 216 EDARIAVQAG-AAGIIV 231 (349)
Q Consensus 216 ~~a~~a~~~G-~d~I~v 231 (349)
++|+.+++.| +|.|.+
T Consensus 299 e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 299 DSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHcCCccEEEE
Confidence 9999999998 999987
No 469
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=92.21 E-value=0.49 Score=43.99 Aligned_cols=79 Identities=16% Similarity=0.155 Sum_probs=50.4
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV 212 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v 212 (349)
+.+...+.+++..+.|++.|.|+..+..+|...-+..+. ... ...|+.+++..++||.+ ..
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE-----------------~~Rv~pvI~~l~~~~~vpiSI-DT 92 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEE-----------------IQRVVPVIKAIRKESDVLISI-DT 92 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHH-----------------HHHHHHHHHHHHHHCCCEEEE-EC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHH-----------------HHHHHHHHHHHHhhCCceEEE-eC
Confidence 345556667777889999999887654332111000000 001 34577788777899987 56
Q ss_pred cCHHHHHHHHHcCCCEEE
Q 018919 213 LTAEDARIAVQAGAAGII 230 (349)
Q Consensus 213 ~~~~~a~~a~~~G~d~I~ 230 (349)
..++.++.|+++|++.|-
T Consensus 93 ~~~~Va~aAl~aGa~iIN 110 (314)
T 2vef_A 93 WKSQVAEAALAAGADLVN 110 (314)
T ss_dssp SCHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHcCCCEEE
Confidence 788999999999998774
No 470
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=92.08 E-value=1.2 Score=39.64 Aligned_cols=40 Identities=23% Similarity=0.250 Sum_probs=33.7
Q ss_pred HHHHHHHHHh--cCCcEEEEEecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTI--TKLPILVKGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~--~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++.++++++. .++|+++=+-.+++++..+.++|+|+|.+.
T Consensus 178 l~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gvav~ 219 (243)
T 3o63_A 178 LGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVV 219 (243)
T ss_dssp HHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEEES
T ss_pred HHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEEEe
Confidence 7888888876 489988766569999999999999999985
No 471
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=91.99 E-value=2 Score=39.03 Aligned_cols=94 Identities=17% Similarity=0.118 Sum_probs=62.5
Q ss_pred HHHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCC----CCCCchhhHHH----HHHHHHHhcCCCcEEE
Q 018919 193 DEDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMA----LEEVVKATQGRIPVFL 264 (349)
Q Consensus 193 ~~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~----~~~~~~~~~~~----l~~i~~~~~~~ipvia 264 (349)
...++++++. +-||.+=+.-+.-.|+.+.++|+|.|.+....+- ..|.++-+++. ...+++.. .+.||++
T Consensus 18 ~~~lr~~~~~-g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~-~~~~vva 95 (275)
T 3vav_A 18 VPKLQAMREA-GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQ-PRALIVA 95 (275)
T ss_dssp HHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTC-CSSEEEE
T ss_pred HHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcC-CCCCEEE
Confidence 5567766654 6788877777889999999999999955422110 12344545433 33344433 2589999
Q ss_pred ec---CCCCHHHHH----HHHHhCCCEEEEc
Q 018919 265 DG---GVRRGTDVF----KALALGASGIFIG 288 (349)
Q Consensus 265 ~G---GI~~~~dv~----kal~~GA~~V~ig 288 (349)
|- |..++++++ +++..||++|-+-
T Consensus 96 D~pfgsY~s~~~a~~~a~rl~kaGa~aVklE 126 (275)
T 3vav_A 96 DLPFGTYGTPADAFASAVKLMRAGAQMVKFE 126 (275)
T ss_dssp ECCTTSCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ecCCCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 84 456888875 5667899999875
No 472
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=91.92 E-value=0.39 Score=45.81 Aligned_cols=72 Identities=11% Similarity=0.009 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEecCH
Q 018919 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGVLTA 215 (349)
Q Consensus 136 ~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v~~~ 215 (349)
+...++++.+++.|+++|.++..... . .+.+ ..++.++++|+.+++||++-+-.++
T Consensus 255 ~~~~~la~~le~~Gvd~i~v~~~~~~---------~---~~~~------------~~~~~~~~ik~~~~iPvi~~Ggi~~ 310 (377)
T 2r14_A 255 AMAFYLAGELDRRGLAYLHFNEPDWI---------G---GDIT------------YPEGFREQMRQRFKGGLIYCGNYDA 310 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC------------------C------------CCTTHHHHHHHHCCSEEEEESSCCH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCccc---------C---CCCc------------chHHHHHHHHHHCCCCEEEECCCCH
Confidence 45667889999999999987653210 0 0100 0156788999999999988765689
Q ss_pred HHHHHHHHcC-CCEEEE
Q 018919 216 EDARIAVQAG-AAGIIV 231 (349)
Q Consensus 216 ~~a~~a~~~G-~d~I~v 231 (349)
++|+.+++.| ||+|.+
T Consensus 311 ~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 311 GRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHCCCceEEee
Confidence 9999999998 999988
No 473
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=91.90 E-value=0.42 Score=45.02 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=34.6
Q ss_pred HHHHHHHHHhc--CCcEEE-EEecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTIT--KLPILV-KGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~--~~pv~v-K~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
|+.++++++.+ ++||+. .++.+.++|.+++.+|||+|.+.
T Consensus 262 ~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 262 LANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIG 304 (345)
T ss_dssp HHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEC
Confidence 67899999988 699864 45789999999999999999984
No 474
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=91.83 E-value=7.2 Score=35.35 Aligned_cols=172 Identities=15% Similarity=0.127 Sum_probs=100.7
Q ss_pred ceeecccccccccCChhhHHHHHHHHHcCCeEEe--cC---CCCCCHHHHHh-------hCCCceEEEEeecCChhHHHH
Q 018919 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------TGPGIRFFQLYVYKDRNVVAQ 140 (349)
Q Consensus 73 Pi~iApm~~~~l~~~~~~~~la~aa~~~G~~~~~--~~---~~~~~~e~i~~-------~~~~~~~~Ql~~~~~~~~~~~ 140 (349)
|.++.|+.-.+-.+.++-..+++-.-+.|+.+++ ++ +...+.+|-.+ ...+ .+...- ..+-....+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg-~~~t~~ai~ 82 (288)
T 2nuw_A 5 SPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVG-SLNLNDVME 82 (288)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECC-CSCHHHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeC-CCCHHHHHH
Confidence 4556676433323444455777777788887654 32 23456666432 1224 444543 245566788
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCC-CCcCcccccCCCCCCc-hHHHHHHHHHhcCCcEEEEEe------
Q 018919 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTL-PPFLTLKNFQGLDLGK-MDEDVKWLQTITKLPILVKGV------ 212 (349)
Q Consensus 141 ~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~-p~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~pv~vK~v------ 212 (349)
+++.+++.|++++.+. .|.. .- | +.+ ..+..+.+.+.+++||++=.+
T Consensus 83 la~~A~~~Gadavlv~--~P~y-----------~~~~------------s~~~l~~~f~~va~a~~lPiilYn~P~~tg~ 137 (288)
T 2nuw_A 83 LVKFSNEMDILGVSSH--SPYY-----------FPRL------------PEKFLAKYYEEIARISSHSLYIYNYPAATGY 137 (288)
T ss_dssp HHHHHHTSCCSEEEEC--CCCS-----------SCSC------------CHHHHHHHHHHHHHHCCSCEEEEECHHHHSC
T ss_pred HHHHHHhcCCCEEEEc--CCcC-----------CCCC------------CHHHHHHHHHHHHHhcCCCEEEEECchHhCc
Confidence 8999999999998763 2321 10 0 111 256677888888999998664
Q ss_pred -cCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEchH
Q 018919 213 -LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 290 (349)
Q Consensus 213 -~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~ 290 (349)
.+++...++ .+-+|.-+. .++..+.++.+ .++++.|+ +|- ..-++.++.+ |+++.-+.+
T Consensus 138 ~l~~~~~~~L---nIvgiKdss----------gd~~~~~~~~~-~~~~f~v~-~G~---d~~~~~~l~~-~~G~is~~a 197 (288)
T 2nuw_A 138 DIPPSILKSL---PVKGIKDTN----------QDLAHSLEYKL-NLPGVKVY-NGS---NTLIYYSLLS-LDGVVASFT 197 (288)
T ss_dssp CCCHHHHTTT---TEEEEEECC----------SCHHHHHHHHH-HSTTCEEE-ECC---GGGHHHHHTT-SSEEECGGG
T ss_pred CCCHHHHhcc---EEEEEEeCC----------CCHHHHHHHHh-cCCCeEEE-ECc---HHHHHHHHHH-hCEEEecHH
Confidence 355666555 444444321 12444555555 54456554 442 2456778888 999998875
No 475
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=91.82 E-value=2.6 Score=38.70 Aligned_cols=91 Identities=23% Similarity=0.375 Sum_probs=60.9
Q ss_pred HHHHHHHHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCC---C--CCCCchhhHH----HHHHHHHHhcCCCcEEE
Q 018919 194 EDVKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGA---R--QLDYVPATIM----ALEEVVKATQGRIPVFL 264 (349)
Q Consensus 194 ~~i~~i~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg---~--~~~~~~~~~~----~l~~i~~~~~~~ipvia 264 (349)
..++++++. +-|+.+-++-+.-.|+.+.++|+|+|.+++.+- . ..|.++-+++ .+..|.+.. ++||++
T Consensus 7 ~~lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~--~~Pvia 83 (295)
T 1xg4_A 7 KAFRAALTK-ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC--SLPLLV 83 (295)
T ss_dssp HHHHHHHHH-SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC--CSCEEE
T ss_pred HHHHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC--CCCEEe
Confidence 345555543 568888788888999999999999999986421 0 1234444443 344455554 689999
Q ss_pred ec--CCC-CHHHHH----HHHHhCCCEEEE
Q 018919 265 DG--GVR-RGTDVF----KALALGASGIFI 287 (349)
Q Consensus 265 ~G--GI~-~~~dv~----kal~~GA~~V~i 287 (349)
|. |.. ++.++. +++..||++|.|
T Consensus 84 D~d~Gyg~~~~~~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 84 DADIGFGSSAFNVARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp ECTTCSSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCcccCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 87 433 555554 355689999987
No 476
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae}
Probab=91.79 E-value=3.6 Score=38.46 Aligned_cols=97 Identities=9% Similarity=0.042 Sum_probs=66.5
Q ss_pred HHHHHH-HHhcCCcEEEEEecCHHHHHHHHHcCCCEEEEecCCCCCCC------------CchhhHHHHHHHHHHh---c
Q 018919 194 EDVKWL-QTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLD------------YVPATIMALEEVVKAT---Q 257 (349)
Q Consensus 194 ~~i~~i-~~~~~~pv~vK~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~------------~~~~~~~~l~~i~~~~---~ 257 (349)
+.++.+ .+. ++++-+-.+.+.+.+..|.++|+..|... =||-.+ .+.+.+..+.++.+.. +
T Consensus 153 ~A~~~L~~~e-GI~vNvTLiFS~~Qa~aaa~AGa~~iSpF--VgRidd~~~~~~~~~~~~~~d~Gv~~v~~iy~~y~~~~ 229 (339)
T 3cq0_A 153 QAARELEVKH-GIHCNMTLLFSFTQAVACAEANVTLISPF--VGRIMDFYKALSGKDYTAETDPGVLSVKKIYSYYKRHG 229 (339)
T ss_dssp HHHHHHHHHH-CCCEEEEEECCHHHHHHHHHTTCSEEEEB--SHHHHHHHHHC---CCCTTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHc-CCceeEeeeCCHHHHHHHHHcCCcEEEec--ccHHHHHhhhhcccccccccChHHHHHHHHHHHHHHcC
Confidence 445555 443 89999989999999999999999988764 122100 1222344455554443 2
Q ss_pred CCCcEEEecCCCCHHHHHHHHHhCCCEEEEchHHHHHHh
Q 018919 258 GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 296 (349)
Q Consensus 258 ~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~~~l~~~~ 296 (349)
.+. .+..-.+|+..+|.. ..|+|.+-|.-.++..+.
T Consensus 230 ~~T-~v~~AS~r~~~~V~~--LaG~d~vTipp~~l~~l~ 265 (339)
T 3cq0_A 230 YAT-EVMAASFRNLDELKA--LAGIDNMTLPLNLLEQLY 265 (339)
T ss_dssp CCC-EEEEBCCCSHHHHHH--HTTSSEEEEEHHHHHHHH
T ss_pred CCc-EEEecCCCCHHHHHH--hhCCCEEECCHHHHHHHH
Confidence 234 444556999999987 579999999988887765
No 477
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=91.75 E-value=1.3 Score=39.02 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=69.9
Q ss_pred HHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHH---HhcCCcEEEEEec-----
Q 018919 142 VRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQ---TITKLPILVKGVL----- 213 (349)
Q Consensus 142 ~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~---~~~~~pv~vK~v~----- 213 (349)
+..+++.|++-|++.-+-... | ..|. +..++.++ +..++||.+-+.+
T Consensus 14 a~~A~~~GAdRIELc~~L~~G---------------G---------lTPS-~g~i~~~~~~~~~~~ipV~vMIRPR~GdF 68 (224)
T 2bdq_A 14 LTRLDKAIISRVELCDNLAVG---------------G---------TTPS-YGVIKEANQYLHEKGISVAVMIRPRGGNF 68 (224)
T ss_dssp GGGCCTTTCCEEEEEBCGGGT---------------C---------BCCC-HHHHHHHHHHHHHTTCEEEEECCSSSSCS
T ss_pred HHHHHHcCCCEEEEcCCcccC---------------C---------cCCC-HHHHHHHHHhhhhcCCceEEEECCCCCCC
Confidence 345667899999986432211 1 1233 34566666 7789999886652
Q ss_pred --C-------HHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCC-----CCHHHHHHHHH
Q 018919 214 --T-------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV-----RRGTDVFKALA 279 (349)
Q Consensus 214 --~-------~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI-----~~~~dv~kal~ 279 (349)
+ .+|++.+.++|+|+|++.-- . ..|.-..+.+.++.++.+ .+++..-=-+ .++..+++.|.
T Consensus 69 ~Ys~~E~~~M~~Di~~~~~~GadGvV~G~L---t-~dg~iD~~~~~~Li~~a~-~~~vTFHRAFD~~~~~d~~~ale~L~ 143 (224)
T 2bdq_A 69 VYNDLELRIMEEDILRAVELESDALVLGIL---T-SNNHIDTEAIEQLLPATQ-GLPLVFHMAFDVIPKSDQKKSIDQLV 143 (224)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCB---C-TTSSBCHHHHHHHHHHHT-TCCEEECGGGGGSCTTTHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCEEEEeeE---C-CCCCcCHHHHHHHHHHhC-CCeEEEECchhccCCcCHHHHHHHHH
Confidence 2 25688899999999998421 1 122334555566655542 4555543322 55666666554
Q ss_pred -hCCCEEEE
Q 018919 280 -LGASGIFI 287 (349)
Q Consensus 280 -~GA~~V~i 287 (349)
+|.+.|.-
T Consensus 144 ~lGv~rILT 152 (224)
T 2bdq_A 144 ALGFTRILL 152 (224)
T ss_dssp HTTCCEEEE
T ss_pred HcCCCEEEC
Confidence 78888873
No 478
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=91.74 E-value=3.5 Score=38.79 Aligned_cols=126 Identities=18% Similarity=0.218 Sum_probs=85.3
Q ss_pred cCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEE
Q 018919 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVK 210 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK 210 (349)
..+.+...+.++++.++|++++-...-.|.. .| ..+.++ ... ++.++++++.+++|++.
T Consensus 116 ~es~e~a~~~a~~~k~aGa~~vr~q~fKprT------------s~-----~~f~gl--g~egl~~l~~~~~e~Gl~~~t- 175 (350)
T 1vr6_A 116 VEGREMLMETAHFLSELGVKVLRGGAYKPRT------------SP-----YSFQGL--GEKGLEYLREAADKYGMYVVT- 175 (350)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSCCCCC------------ST-----TSCCCC--THHHHHHHHHHHHHHTCEEEE-
T ss_pred cCCHHHHHHHHHHHHHcCCCeeeeeEEeCCC------------Ch-----HhhcCC--CHHHHHHHHHHHHHcCCcEEE-
Confidence 4577888899999999999986543322210 01 011111 123 67788888889999986
Q ss_pred EecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCC-CHHHHHHHHH----hCCCEE
Q 018919 211 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR-RGTDVFKALA----LGASGI 285 (349)
Q Consensus 211 ~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~-~~~dv~kal~----~GA~~V 285 (349)
.+.+++.+..+.+. +|.+.+...- ......|.++.+ . +.||+..-|.. +.+|+..|+. .|..-+
T Consensus 176 e~~d~~~~~~l~~~-vd~lkIgAr~-------~~n~~LL~~va~-~--~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~v 244 (350)
T 1vr6_A 176 EALGEDDLPKVAEY-ADIIQIGARN-------AQNFRLLSKAGS-Y--NKPVLLKRGFMNTIEEFLLSAEYIANSGNTKI 244 (350)
T ss_dssp ECSSGGGHHHHHHH-CSEEEECGGG-------TTCHHHHHHHHT-T--CSCEEEECCTTCCHHHHHHHHHHHHHTTCCCE
T ss_pred EeCCHHHHHHHHHh-CCEEEECccc-------ccCHHHHHHHHc-c--CCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeE
Confidence 67788888889899 9999994321 113456666653 2 79999999998 8888876654 476444
Q ss_pred EEc
Q 018919 286 FIG 288 (349)
Q Consensus 286 ~ig 288 (349)
.++
T Consensus 245 iLc 247 (350)
T 1vr6_A 245 ILC 247 (350)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 479
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=91.66 E-value=1.6 Score=40.99 Aligned_cols=86 Identities=8% Similarity=0.011 Sum_probs=59.1
Q ss_pred ceEEEEeec------CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHH
Q 018919 124 IRFFQLYVY------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDV 196 (349)
Q Consensus 124 ~~~~Ql~~~------~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i 196 (349)
+.++.|-.. .+.+...++++.++++ ++.|.+...... +... . ..+.. ++.+
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~--------------~~~~--~-----~~~~~~~~~~ 269 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLL--------------NVDI--N-----LYPGYQVKYA 269 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSS--------------CCCC--C-----CCTTTTHHHH
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceE--------------eeee--c-----ccCceeehHH
Confidence 566666431 1345677888888889 999887532211 0000 0 11233 7889
Q ss_pred HHHHHhcCCcEEEEE-ecCHHHHHHHHHcC-CCEEEE
Q 018919 197 KWLQTITKLPILVKG-VLTAEDARIAVQAG-AAGIIV 231 (349)
Q Consensus 197 ~~i~~~~~~pv~vK~-v~~~~~a~~a~~~G-~d~I~v 231 (349)
+++|+.+++||+.-+ +.++++|+.+++.| +|.|.+
T Consensus 270 ~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~i 306 (343)
T 3kru_A 270 ETIKKRCNIKTSAVGLITTQELAEEILSNERADLVAL 306 (343)
T ss_dssp HHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHH
Confidence 999999999998765 46899999999998 999987
No 480
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=91.64 E-value=1.7 Score=38.30 Aligned_cols=40 Identities=23% Similarity=0.198 Sum_probs=32.7
Q ss_pred HHHHHHHHHhc-----CCcEEEEEecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTIT-----KLPILVKGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~-----~~pv~vK~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
.+.|+++|+.. +++|.+-+-.+++.+..+.++|||.+++.
T Consensus 151 l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 151 LDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEc
Confidence 56677776654 57888877788999999999999999985
No 481
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=91.50 E-value=0.92 Score=41.45 Aligned_cols=75 Identities=17% Similarity=0.003 Sum_probs=51.4
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-----HHHHHHHHHhcCCcEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-----DEDVKWLQTITKLPIL 208 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-----~~~i~~i~~~~~~pv~ 208 (349)
+.+...+.+++..+.|++.|.|+..+..+|.. | .+..- ...++.+++.+++||.
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~----------~-----------v~~~eE~~rv~pvi~~l~~~~~~piS 94 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAA----------E-----------VSVEEELQRVIPVVEAIAQRFEVWIS 94 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCC----------C-----------CCHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCC----------c-----------CCHHHHHHHHHHHHHHHHhhcCCeEE
Confidence 45556667777788999999988754322200 0 11111 3457777777799998
Q ss_pred EEEecCHHHHHHHHHcCCCEEE
Q 018919 209 VKGVLTAEDARIAVQAGAAGII 230 (349)
Q Consensus 209 vK~v~~~~~a~~a~~~G~d~I~ 230 (349)
+ ....++.++.|+++|++.|-
T Consensus 95 I-DT~~~~va~aAl~aGa~iIN 115 (282)
T 1aj0_A 95 V-DTSKPEVIRESAKVGAHIIN 115 (282)
T ss_dssp E-ECCCHHHHHHHHHTTCCEEE
T ss_pred E-eCCCHHHHHHHHHcCCCEEE
Confidence 7 56788999999999998774
No 482
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=91.44 E-value=1.5 Score=41.45 Aligned_cols=42 Identities=24% Similarity=0.386 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 245 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 245 ~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
.++.+.++++.. ++||+. +|+.+.+++.++..+|||+|.++.
T Consensus 213 ~~~~i~~l~~~~--~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTIT--SLPILV-KGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHC--CSCEEE-ECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHh--CCCEEE-EecCCHHHHHHHHHcCCCEEEECC
Confidence 356677777766 789985 678999999999999999999954
No 483
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=91.43 E-value=0.89 Score=43.52 Aligned_cols=91 Identities=18% Similarity=0.167 Sum_probs=58.3
Q ss_pred CHHHHHh---hCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCC
Q 018919 113 SVEEVAS---TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL 189 (349)
Q Consensus 113 ~~e~i~~---~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~ 189 (349)
..+++.. ..+.+.++... .+ .+.+++++++|+++|.+.- .|.|. .. ..
T Consensus 240 ~~~~i~~lr~~~~~PvivKgv--~~----~e~A~~a~~aGad~I~vs~----~ggr~---------~~----------~g 290 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAKGI--LR----GDDAREAVKHGLNGILVSN----HGARQ---------LD----------GV 290 (392)
T ss_dssp CHHHHHHHC--CCSCEEEEEE--CC----HHHHHHHHHTTCCEEEECC----GGGTS---------ST----------TC
T ss_pred HHHHHHHHHHhhCCCEEEEec--CC----HHHHHHHHHcCCCEEEeCC----CCCCc---------CC----------CC
Confidence 3444443 33345555532 22 4457889999999998731 11110 00 11
Q ss_pred CchHHHHHHHHHhc--CCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 190 GKMDEDVKWLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 190 ~~~~~~i~~i~~~~--~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
+..++.+.++++.. ++||++=+ +.+.+|+.+++.+|||+|.+.
T Consensus 291 ~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iG 336 (392)
T 2nzl_A 291 PATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVG 336 (392)
T ss_dssp CCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred cChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEEC
Confidence 22367788888776 58987644 689999999999999999883
No 484
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=91.41 E-value=1.3 Score=42.06 Aligned_cols=87 Identities=17% Similarity=0.226 Sum_probs=56.7
Q ss_pred HHHhc-CCcEEEEEe-------cCHHHHHHHHH-cCCCEEEEecCCCC---C----CCCchhhHHHHHHHHHHhcCCCcE
Q 018919 199 LQTIT-KLPILVKGV-------LTAEDARIAVQ-AGAAGIIVSNHGAR---Q----LDYVPATIMALEEVVKATQGRIPV 262 (349)
Q Consensus 199 i~~~~-~~pv~vK~v-------~~~~~a~~a~~-~G~d~I~v~~~gg~---~----~~~~~~~~~~l~~i~~~~~~~ipv 262 (349)
+|+.. +.|++...- .+++.++++.+ .++|++.+.-.... + .+.....++.+.++++.+ ++||
T Consensus 113 vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~--~vPV 190 (368)
T 3vkj_A 113 VRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKEL--SVPI 190 (368)
T ss_dssp HHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTC--SSCE
T ss_pred HHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHc--CCCE
Confidence 44433 677776432 24577766554 68888887522110 0 011112466777777665 7999
Q ss_pred EEe--cCCCCHHHHHHHHHhCCCEEEE
Q 018919 263 FLD--GGVRRGTDVFKALALGASGIFI 287 (349)
Q Consensus 263 ia~--GGI~~~~dv~kal~~GA~~V~i 287 (349)
++- |+-.+++++.++..+|||+|.+
T Consensus 191 ivK~vG~g~s~~~A~~l~~aGad~I~V 217 (368)
T 3vkj_A 191 IVKESGNGISMETAKLLYSYGIKNFDT 217 (368)
T ss_dssp EEECSSSCCCHHHHHHHHHTTCCEEEC
T ss_pred EEEeCCCCCCHHHHHHHHhCCCCEEEE
Confidence 995 5557899999999999999998
No 485
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=91.37 E-value=3.2 Score=38.23 Aligned_cols=110 Identities=20% Similarity=0.186 Sum_probs=72.4
Q ss_pred cCHHHHHHHH-HcCCCEEEEec---CCCCCCCCch-hhHHHHHHHHHHhcCCCcEEEecCC-------------------
Q 018919 213 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGV------------------- 268 (349)
Q Consensus 213 ~~~~~a~~a~-~~G~d~I~v~~---~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI------------------- 268 (349)
.+|++|+... +.|+|.+-++. ||-+...+.| -.++.|.+|.+.. ++|++.=||=
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~--~~PLVlHGgS~vp~~~~~~~~~~gg~~~~ 232 (307)
T 3n9r_A 155 VNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT--NIPLVLHGASAIPDNVRKSYLDAGGDLKG 232 (307)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH--CSCEEESSCCCCCHHHHHHHHHTTCCCTT
T ss_pred CCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC--CCCeEEeCCCCcchHHHHHHHHhcCccCC
Confidence 4688887754 69999999873 5543222222 2578888886654 6999998853
Q ss_pred ---CCHHHHHHHHHhCCCEEEEchHHHHHHhh-------cC-----H-HHHHHHHHHHHHHHHHHHHHcCCC
Q 018919 269 ---RRGTDVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 324 (349)
Q Consensus 269 ---~~~~dv~kal~~GA~~V~ig~~~l~~~~~-------~G-----~-~gv~~~l~~l~~el~~~m~~~G~~ 324 (349)
...+++.+++.+|..-|=|+|-+.++... .. + .-+....+.+++.++..|..+|..
T Consensus 233 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 304 (307)
T 3n9r_A 233 SKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSA 304 (307)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHcCceEEEechHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 23478889999999999999976554321 01 1 122333455666667777777764
No 486
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=91.33 E-value=1.4 Score=38.63 Aligned_cols=73 Identities=16% Similarity=0.098 Sum_probs=50.8
Q ss_pred HHHHHHHHcCCCEEEEec-CCCCCCCC-chhhHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHH----HhCCCEEEEc
Q 018919 216 EDARIAVQAGAAGIIVSN-HGARQLDY-VPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKAL----ALGASGIFIG 288 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~-~gg~~~~~-~~~~~~~l~~i~~~~~~-~ipvia~GGI~~~~dv~kal----~~GA~~V~ig 288 (349)
.+++.|++.|||.|.+.- -|.- .++ -....+.+.++++++++ .++||..-+.-+.+.+.++- ++|||+|=..
T Consensus 75 ~e~~~Ai~~GAdevd~vinig~~-~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 75 LEAALACARGADEVDMVLHLGRA-KAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHH-HTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHcCCCEEEecccchhh-hCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 568999999999998753 2210 011 12235567777777643 47989888899988877643 4799999887
Q ss_pred h
Q 018919 289 R 289 (349)
Q Consensus 289 ~ 289 (349)
+
T Consensus 154 T 154 (220)
T 1ub3_A 154 T 154 (220)
T ss_dssp C
T ss_pred C
Confidence 5
No 487
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=91.25 E-value=1.3 Score=43.86 Aligned_cols=87 Identities=22% Similarity=0.162 Sum_probs=55.4
Q ss_pred HHhhCCCceEEEEeecCChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHH
Q 018919 117 VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDV 196 (349)
Q Consensus 117 i~~~~~~~~~~Ql~~~~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i 196 (349)
+++..+.+.++.... + .+.+++++++|+++|.+.- . |.+ ++. ..+..++.+
T Consensus 338 lr~~~~~PvivKgv~--~----~e~A~~a~~aGad~I~vs~-h---gG~--------~~d-----------~~~~~~~~l 388 (511)
T 1kbi_A 338 LKKKTKLPIVIKGVQ--R----TEDVIKAAEIGVSGVVLSN-H---GGR--------QLD-----------FSRAPIEVL 388 (511)
T ss_dssp HHHHCSSCEEEEEEC--S----HHHHHHHHHTTCSEEEECC-T---TTT--------SST-----------TCCCHHHHH
T ss_pred HHHHhCCcEEEEeCC--C----HHHHHHHHHcCCCEEEEcC-C---CCc--------cCC-----------CCCchHHHH
Confidence 344444455555322 2 3457888999999998732 1 111 000 011125667
Q ss_pred HHHHHhc-------CCcEEEEE-ecCHHHHHHHHHcCCCEEEEe
Q 018919 197 KWLQTIT-------KLPILVKG-VLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 197 ~~i~~~~-------~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~ 232 (349)
.++++.. ++||++=+ +.+.+++.+++.+|||+|.+.
T Consensus 389 ~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 389 AETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 7776665 68987654 689999999999999999883
No 488
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=91.25 E-value=1.9 Score=40.28 Aligned_cols=149 Identities=11% Similarity=0.085 Sum_probs=0.0
Q ss_pred ChhHHHHHHH-HHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHH------hcCCc
Q 018919 134 DRNVVAQLVR-RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQT------ITKLP 206 (349)
Q Consensus 134 ~~~~~~~~~~-~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~------~~~~p 206 (349)
+.+...+.++ .+.++|++.|++..... ++..|+.++++++ ..+..
T Consensus 39 ~~~~k~~i~~~~L~~~Gv~~IE~g~~~~----------------------------~~~~~~~v~~~~~~~~~~~~~~~~ 90 (337)
T 3ble_A 39 STSEKLNIAKFLLQKLNVDRVEIASARV----------------------------SKGELETVQKIMEWAATEQLTERI 90 (337)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEETTS----------------------------CTTHHHHHHHHHHHHHHTTCGGGE
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCC----------------------------ChhHHHHHHHHHhhhhhhccCCCC
Q ss_pred EEEEEecCHHHHHHHHHcCCCEEEEec-----CCCCCCCCchh-hHHHHHHHHHHhcC-CCcEEEe------cCCCCHH-
Q 018919 207 ILVKGVLTAEDARIAVQAGAAGIIVSN-----HGARQLDYVPA-TIMALEEVVKATQG-RIPVFLD------GGVRRGT- 272 (349)
Q Consensus 207 v~vK~v~~~~~a~~a~~~G~d~I~v~~-----~gg~~~~~~~~-~~~~l~~i~~~~~~-~ipvia~------GGI~~~~- 272 (349)
-+.-.+.+..+++.+.++|+|.|.+.. |.-+.+..... .++.+.++.+..+. ...|.++ ++-.+.+
T Consensus 91 ~i~~l~~~~~~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~ 170 (337)
T 3ble_A 91 EILGFVDGNKTVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDY 170 (337)
T ss_dssp EEEEESSTTHHHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHH
T ss_pred eEEEEccchhhHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHH
Q ss_pred --HHHHHHH-hCCCEEEEchHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018919 273 --DVFKALA-LGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 314 (349)
Q Consensus 273 --dv~kal~-~GA~~V~ig~~~l~~~~~~G~~gv~~~l~~l~~el 314 (349)
++++.+. +||+.+.++-.. +..-+..+.++++.+++++
T Consensus 171 ~~~~~~~~~~~Ga~~i~l~DT~----G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 171 VKSLVEHLSKEHIERIFLPDTL----GVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp HHHHHHHHHTSCCSEEEEECTT----CCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEecCC----CCcCHHHHHHHHHHHHHhc
No 489
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=91.23 E-value=4.4 Score=38.65 Aligned_cols=115 Identities=17% Similarity=0.081 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc-CCcEEEEEe
Q 018919 136 NVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT-KLPILVKGV 212 (349)
Q Consensus 136 ~~~~~~~~~~~~~-G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~-~~pv~vK~v 212 (349)
+.+.+.++++.+. |+..+-+.++. +++. .+.++.+|+.+ ++++.+-.-
T Consensus 170 e~~~~~a~~~~~~~G~~~~K~KvG~-----------------------------~~~~d~~~v~avR~~~~~~~l~vDaN 220 (398)
T 4dye_A 170 KAMAEHAVRVVEEGGFDAVKLKGTT-----------------------------DCAGDVAILRAVREALPGVNLRVDPN 220 (398)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCS-----------------------------CHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCC-----------------------------CHHHHHHHHHHHHHhCCCCeEEeeCC
Confidence 5566667777777 99999887641 1112 46688888886 566766431
Q ss_pred --cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-CCEE
Q 018919 213 --LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGI 285 (349)
Q Consensus 213 --~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A~~V 285 (349)
-+.++| +.+.+.|++.|- | --+ .++.+.++++.. .+||.++.-+.+..|+.++++.| +|.|
T Consensus 221 ~~w~~~~A~~~~~~l~~~~i~~iE-------q--P~~-d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~d~v 288 (398)
T 4dye_A 221 AAWSVPDSVRAGIALEELDLEYLE-------D--PCV-GIEGMAQVKAKV--RIPLCTNMCVVRFEDFAPAMRLNAVDVI 288 (398)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEE-------C--CSS-HHHHHHHHHHHC--CSCEEESSSCCSGGGHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCCCEEc-------C--CCC-CHHHHHHHHhhC--CCCEEeCCcCCCHHHHHHHHHhCCCCEE
Confidence 345554 445567777662 1 112 677788888776 79999999999999999999986 8999
Q ss_pred EEchHH
Q 018919 286 FIGRPV 291 (349)
Q Consensus 286 ~ig~~~ 291 (349)
++--..
T Consensus 289 ~~k~~~ 294 (398)
T 4dye_A 289 HGDVYK 294 (398)
T ss_dssp EECHHH
T ss_pred EeCccc
Confidence 987544
No 490
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=91.10 E-value=1.2 Score=41.35 Aligned_cols=70 Identities=17% Similarity=0.163 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhcCCcEEEEEe---
Q 018919 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTITKLPILVKGV--- 212 (349)
Q Consensus 137 ~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~pv~vK~v--- 212 (349)
...+.+++..+.|++.|.|+..+.. |.. . ..+++- ++.++.+++.+++||.+-..
T Consensus 75 ~~~~~A~~~v~~GAdiIDIg~~Str--------------P~~---~----~vs~eee~~vV~~v~~~~~vplsI~DT~~~ 133 (310)
T 2h9a_B 75 DPVAWAKKCVEYGADIVALRLVSAH--------------PDG---Q----NRSGAELAEVCKAVADAIDVPLMIIGCGVE 133 (310)
T ss_dssp CHHHHHHHHHHTTCSEEEEECGGGC--------------TTT---T----CCCHHHHHHHHHHHHHHCSSCEEEECCSCH
T ss_pred HHHHHHHHHHHcCCcEEEEeCccCC--------------CCC---C----CCCHHHHHHHHHHHHHhCCceEEEECCCCC
Confidence 4456666777899999998875321 110 0 012333 56788998888999998666
Q ss_pred -cCHHHHHHHHHcCCC
Q 018919 213 -LTAEDARIAVQAGAA 227 (349)
Q Consensus 213 -~~~~~a~~a~~~G~d 227 (349)
.+++.++.++++|++
T Consensus 134 ~~~~~V~eaal~aga~ 149 (310)
T 2h9a_B 134 EKDAEIFPVIGEALSG 149 (310)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHhCCC
Confidence 678889999999997
No 491
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=90.95 E-value=7.1 Score=36.88 Aligned_cols=120 Identities=14% Similarity=0.053 Sum_probs=80.3
Q ss_pred ChhHHHHHHHHHHH-cCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEE
Q 018919 134 DRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILV 209 (349)
Q Consensus 134 ~~~~~~~~~~~~~~-~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~v 209 (349)
+++...+.+++..+ .|++.+-+.++.. +++. .+.++.+|+.+ ++++.+
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~----------------------------~~~~d~~~v~avR~a~g~~~~l~v 199 (382)
T 3dgb_A 148 DTAKDIAEAQKMLDLRRHRIFKLKIGAG----------------------------EVDRDLAHVIAIKKALGDSASVRV 199 (382)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECCSS----------------------------CHHHHHHHHHHHHHHHGGGSEEEE
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEeeCCC----------------------------CHHHHHHHHHHHHHHcCCCCeEEE
Confidence 55544444444444 6999998877531 1112 46688888887 467777
Q ss_pred EEe--cCHHHH----HHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 210 KGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 210 K~v--~~~~~a----~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
..- -+.++| +.+.+.|+..|- | ...+..++.+.++++.. .+||+++.-+.+..|+.++++.| +
T Consensus 200 DaN~~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~~~~~ 269 (382)
T 3dgb_A 200 DVNQAWDEAVALRACRILGGNGIDLIE-------Q-PISRNNRAGMVRLNASS--PAPIMADESIECVEDAFNLAREGAA 269 (382)
T ss_dssp ECTTCBCHHHHHHHHHHHHTTTCCCEE-------C-CBCTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHHHHTCC
T ss_pred eCCCCCCHHHHHHHHHHHhhcCcCeee-------C-CCCccCHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHcCCC
Confidence 532 345554 445667776652 1 11233577788888776 79999999999999999999975 7
Q ss_pred CEEEEchHH
Q 018919 283 SGIFIGRPV 291 (349)
Q Consensus 283 ~~V~ig~~~ 291 (349)
|.|++--..
T Consensus 270 d~v~~k~~~ 278 (382)
T 3dgb_A 270 SVFALKIAK 278 (382)
T ss_dssp SEEEECHHH
T ss_pred CEEEecccc
Confidence 999987543
No 492
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=90.95 E-value=0.54 Score=43.34 Aligned_cols=75 Identities=21% Similarity=0.201 Sum_probs=50.1
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-----HHHHHHHHHhcCCcEE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-----DEDVKWLQTITKLPIL 208 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-----~~~i~~i~~~~~~pv~ 208 (349)
+.+...+.+++..+.|++.|.|+..+..+|.. ..+.+- ...|+.+++.+++||.
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~---------------------~v~~~eE~~RvvpvI~~l~~~~~vpiS 119 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFA---------------------KVSVEEEIKRVVPMIQAVSKEVKLPIS 119 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CC---------------------CCCHHHHHHHHHHHHHHHHHHSCSCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCC---------------------CCCHHHHHHHHHHHHHHHHhcCCceEE
Confidence 44556677777888999999988755322100 011111 2345777777799998
Q ss_pred EEEecCHHHHHHHHHcCCCEEE
Q 018919 209 VKGVLTAEDARIAVQAGAAGII 230 (349)
Q Consensus 209 vK~v~~~~~a~~a~~~G~d~I~ 230 (349)
+ ....++.++.|+++|++.|-
T Consensus 120 I-DT~~~~V~~aAl~aGa~iIN 140 (297)
T 1tx2_A 120 I-DTYKAEVAKQAIEAGAHIIN 140 (297)
T ss_dssp E-ECSCHHHHHHHHHHTCCEEE
T ss_pred E-eCCCHHHHHHHHHcCCCEEE
Confidence 7 56788999999999998873
No 493
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=90.93 E-value=0.56 Score=43.71 Aligned_cols=40 Identities=25% Similarity=0.387 Sum_probs=34.5
Q ss_pred HHHHHHHHHhc-CCcEEE-EEecCHHHHHHHHHcCCCEEEEe
Q 018919 193 DEDVKWLQTIT-KLPILV-KGVLTAEDARIAVQAGAAGIIVS 232 (349)
Q Consensus 193 ~~~i~~i~~~~-~~pv~v-K~v~~~~~a~~a~~~G~d~I~v~ 232 (349)
++.+.++++.. ++||++ .++.+.+++.+++.+|||+|.+.
T Consensus 244 ~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~GAd~V~ig 285 (332)
T 1vcf_A 244 ARAILEVREVLPHLPLVASGGVYTGTDGAKALALGADLLAVA 285 (332)
T ss_dssp HHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHhCCChHhhh
Confidence 77888898888 799876 44789999999999999999984
No 494
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=90.93 E-value=6.1 Score=36.35 Aligned_cols=110 Identities=26% Similarity=0.331 Sum_probs=74.8
Q ss_pred cCHHHHHHHH-HcCCCEEEEec---CCCCCCCCch-hhHHHHHHHHHHhcCCCcEEEecCC-------------------
Q 018919 213 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGV------------------- 268 (349)
Q Consensus 213 ~~~~~a~~a~-~~G~d~I~v~~---~gg~~~~~~~-~~~~~l~~i~~~~~~~ipvia~GGI------------------- 268 (349)
.+|++|+... +.|+|.+-++. ||-+..++.| -.++.|.+|.+.+ .+|++.=||=
T Consensus 153 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~--~vpLVlHGgSsv~~~~~~~~~~~gg~~~~ 230 (305)
T 1rvg_A 153 TNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV--PAPLVLHGASAVPPELVERFRASGGEIGE 230 (305)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC--CSCEEECSCCCCCHHHHHHHHHTTCCCCS
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCcHHHHHHHHhhcccccc
Confidence 4678887766 59999999873 5544322222 2578899999988 6999998865
Q ss_pred --C-CHHHHHHHHHhCCCEEEEchHHHHHHhh-------cC-----H-HHHHHHHHHHHHHHHHHHHHcCCC
Q 018919 269 --R-RGTDVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 324 (349)
Q Consensus 269 --~-~~~dv~kal~~GA~~V~ig~~~l~~~~~-------~G-----~-~gv~~~l~~l~~el~~~m~~~G~~ 324 (349)
. .-+++.|++.+|..-|=|+|-+-++... .. + .-+....+.+++.++..|..+|..
T Consensus 231 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 302 (305)
T 1rvg_A 231 AAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSV 302 (305)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3 3467888999999999999976554321 11 1 123334456677777777777764
No 495
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=90.84 E-value=0.31 Score=43.21 Aligned_cols=40 Identities=28% Similarity=0.274 Sum_probs=35.2
Q ss_pred HHHHHHHHHhc-CCcEEEEE-ecCHHHHHHHHHcCCCEEEEec
Q 018919 193 DEDVKWLQTIT-KLPILVKG-VLTAEDARIAVQAGAAGIIVSN 233 (349)
Q Consensus 193 ~~~i~~i~~~~-~~pv~vK~-v~~~~~a~~a~~~G~d~I~v~~ 233 (349)
.+.++++++.+ ++|+++.+ +.++|+++.+. .|||+|++.+
T Consensus 168 ~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 168 IEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp HHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred HHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 57899999998 79999987 68999999998 7999999953
No 496
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=90.82 E-value=0.61 Score=43.37 Aligned_cols=73 Identities=23% Similarity=0.169 Sum_probs=47.3
Q ss_pred ChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-----HHHHHHHHHhc-CCcE
Q 018919 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-----DEDVKWLQTIT-KLPI 207 (349)
Q Consensus 134 ~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-----~~~i~~i~~~~-~~pv 207 (349)
+.+...+.+++..+.|++.|.|+..+..+| .. .+.+- ...|+.+++.+ ++||
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG-~~---------------------v~~~eEl~Rv~pvI~~l~~~~~~vpI 120 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKAGPG-ER---------------------VDVDTEITRLVPFIEWLRGAYPDQLI 120 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC--------------------------------CHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCC-CC---------------------CCHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 456666777888889999998876543222 10 11111 23477778777 8999
Q ss_pred EEEEecCHHHHHHHHHcCCCEE
Q 018919 208 LVKGVLTAEDARIAVQAGAAGI 229 (349)
Q Consensus 208 ~vK~v~~~~~a~~a~~~G~d~I 229 (349)
.+ ....++.++.|+++|++.|
T Consensus 121 SI-DT~~~~VaeaAl~aGa~iI 141 (318)
T 2vp8_A 121 SV-DTWRAQVAKAACAAGADLI 141 (318)
T ss_dssp EE-ECSCHHHHHHHHHHTCCEE
T ss_pred EE-eCCCHHHHHHHHHhCCCEE
Confidence 87 5678999999999999965
No 497
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=90.79 E-value=3.5 Score=39.31 Aligned_cols=123 Identities=18% Similarity=0.211 Sum_probs=81.2
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch--HHHHHHHHHhcCCcEEEE
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM--DEDVKWLQTITKLPILVK 210 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~--~~~i~~i~~~~~~pv~vK 210 (349)
.+.+...+.++++.++|++++-...=.|.. .|. .+ ..... ++.++++++..++|++.
T Consensus 153 es~e~a~~~a~~~k~aGa~~vk~q~fkprt------------s~~-----~f---~gl~~egl~~L~~~~~~~Gl~~~t- 211 (385)
T 3nvt_A 153 ESYEQVAAVAESIKAKGLKLIRGGAFKPRT------------SPY-----DF---QGLGLEGLKILKRVSDEYGLGVIS- 211 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSSCCCS------------STT-----SC---CCCTHHHHHHHHHHHHHHTCEEEE-
T ss_pred CCHHHHHHHHHHHHHcCCCeEEcccccCCC------------ChH-----hh---cCCCHHHHHHHHHHHHHcCCEEEE-
Confidence 477788899999999999987643321110 010 01 11112 56688888888999985
Q ss_pred EecCHHHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhcCCCcEEEecCC-CCHHHHHHHHH----hCCCEE
Q 018919 211 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV-RRGTDVFKALA----LGASGI 285 (349)
Q Consensus 211 ~v~~~~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~~~ipvia~GGI-~~~~dv~kal~----~GA~~V 285 (349)
.+.+++.+..+.+. +|.+.+...- ......+..+.+ -+.||+..-|. .+.+|+..++. .|..-|
T Consensus 212 e~~d~~~~~~l~~~-vd~lkIgs~~-------~~n~~LL~~~a~---~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i 280 (385)
T 3nvt_A 212 EIVTPADIEVALDY-VDVIQIGARN-------MQNFELLKAAGR---VDKPILLKRGLSATIEEFIGAAEYIMSQGNGKI 280 (385)
T ss_dssp ECCSGGGHHHHTTT-CSEEEECGGG-------TTCHHHHHHHHT---SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCE
T ss_pred ecCCHHHHHHHHhh-CCEEEECccc-------ccCHHHHHHHHc---cCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 57788888888888 9999984321 112345555443 27899999999 88888877665 476544
Q ss_pred EE
Q 018919 286 FI 287 (349)
Q Consensus 286 ~i 287 (349)
.+
T Consensus 281 ~L 282 (385)
T 3nvt_A 281 IL 282 (385)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 498
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=90.74 E-value=0.41 Score=45.73 Aligned_cols=124 Identities=7% Similarity=0.004 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCch-HHHHHHHHHhc--CCcEEEEEe
Q 018919 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM-DEDVKWLQTIT--KLPILVKGV 212 (349)
Q Consensus 136 ~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~-~~~i~~i~~~~--~~pv~vK~v 212 (349)
+.+.+.++++.+.|++++.++++.. ..|. +. ..+.+. .+.++.+|+.+ +++|.+-.-
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~----------~~~~-~~---------~~~~~~~~e~v~avR~~~g~d~~l~vDan 209 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRG----------GRHM-PL---------WEGTKRDIAIVRGISEVAGPAGKIMIDAN 209 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHH----------HHTS-CH---------HHHHHHHHHHHHHHHHHHCTTCCEEEECT
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcC----------cccC-Cc---------cccHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 6677777888889999999887421 0010 00 001122 56788888876 577876431
Q ss_pred --cCHHHHHH----HHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHhC-C
Q 018919 213 --LTAEDARI----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALG-A 282 (349)
Q Consensus 213 --~~~~~a~~----a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~~---~~ipvia~GGI~~~~dv~kal~~G-A 282 (349)
-+.+++.+ +.+.|++.|- .. +. ..++.+.++++.+. .++||++++ +.+..++.++++.| +
T Consensus 210 ~~~~~~~ai~~~~~l~~~~i~~iE---~P---~~---~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~ 279 (392)
T 3p3b_A 210 NAYNLNLTKEVLAALSDVNLYWLE---EA---FH---EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRV 279 (392)
T ss_dssp TCCCHHHHHHHHHHTTTSCEEEEE---CS---SS---CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSC
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEe---cC---Cc---ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCC
Confidence 35666543 3344444331 10 11 35677777777620 279999999 99999999999987 7
Q ss_pred CEEEEch
Q 018919 283 SGIFIGR 289 (349)
Q Consensus 283 ~~V~ig~ 289 (349)
|.|++--
T Consensus 280 d~v~ik~ 286 (392)
T 3p3b_A 280 DVLQYDI 286 (392)
T ss_dssp CEECCBT
T ss_pred CEEEeCc
Confidence 9998843
No 499
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.73 E-value=4.4 Score=37.24 Aligned_cols=75 Identities=15% Similarity=0.230 Sum_probs=44.7
Q ss_pred CChhHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhhcCCCCcCcccccCCCCCCchHHHHHHHHHhcCCcEEEEEe
Q 018919 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEDVKWLQTITKLPILVKGV 212 (349)
Q Consensus 133 ~~~~~~~~~~~~~~~~G~~~i~i~~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~vK~v 212 (349)
.+.+...+.+++..+.|++.|.|+.+.+..... .+++ .+...|+.+++.+++||.+ ..
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~-eem~--------------------rvv~~i~~~~~~~~vpisI-DT 91 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDGLLDAR-TEMT--------------------TFLNLIMSEPEIARVPVMI-DS 91 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHH-HHHH--------------------HHHHHHHTCHHHHTSCEEE-EC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH-HHHH--------------------HHHHHHHHhhhcCCCeEEE-eC
Confidence 456777778888889999999998864321000 0000 0012233333456778776 45
Q ss_pred cCHHHHHHHHH--cCCCEE
Q 018919 213 LTAEDARIAVQ--AGAAGI 229 (349)
Q Consensus 213 ~~~~~a~~a~~--~G~d~I 229 (349)
..++.++.+++ +|++.|
T Consensus 92 ~~~~V~eaaL~~~~Ga~iI 110 (300)
T 3k13_A 92 SKWEVIEAGLKCLQGKSIV 110 (300)
T ss_dssp SCHHHHHHHHHHCSSCCEE
T ss_pred CCHHHHHHHHHhcCCCCEE
Confidence 66777777777 677644
No 500
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=90.71 E-value=2.5 Score=46.90 Aligned_cols=120 Identities=13% Similarity=0.098 Sum_probs=84.4
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCchhhHHHHHHHHHHh-----cCCCc-EEEecCCCCHHHHHHHHHhCCCEEEEch
Q 018919 216 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIP-VFLDGGVRRGTDVFKALALGASGIFIGR 289 (349)
Q Consensus 216 ~~a~~a~~~G~d~I~v~~~gg~~~~~~~~~~~~l~~i~~~~-----~~~ip-via~GGI~~~~dv~kal~~GA~~V~ig~ 289 (349)
++|..|++.|+..|++|-.+-..-....|.+-++..+..++ +.++- |+=+|-+|+.-+++-.+-.||++|-=.=
T Consensus 591 ~~a~~av~~g~~iliLsDr~~~~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyl 670 (1479)
T 1ea0_A 591 QETEDAVRGGATHVILTDEAMGPARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVNAYL 670 (1479)
T ss_dssp HHHHHHHHHTCCEEEEECTTCBTTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEEECHH
T ss_pred HHHHHHHHCCCcEEEECCCCCCCCccCcCHHHHHHHHHHHHHhcCccccceEEEEeCCchhHHHHHHHHhcCccccCHHH
Confidence 45788899999999999654211112245566666666654 22344 5556889999999888889999997333
Q ss_pred HH--HHHHhhcC-------HHHHHHHHHHHHHHHHHHHHHcCCCChhhhccccee
Q 018919 290 PV--VYSLAAEG-------EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 335 (349)
Q Consensus 290 ~~--l~~~~~~G-------~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~ 335 (349)
+| +..+...| .+.+.++.+.+.++|.+.|..+|.++++.-++..+.
T Consensus 671 a~e~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiF 725 (1479)
T 1ea0_A 671 AQEAIAERHRRGLFGSMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNF 725 (1479)
T ss_dssp HHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCCE
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceee
Confidence 33 22222233 357899999999999999999999999988776554
Done!