Citrus Sinensis ID: 018920

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV
cccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccEEEEEEEEcccccccccccccHHHHHcccccccccccHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEEcccccccccccccccccccccccccEEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEccccccEEEEEEEEccccccEEEccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccc
cccccEEEHHHcccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHccccEcccccHHcEEEEEEcccHcHcccccccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccEEEEEccccccccccHccccccccccccEEEEEcccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHcccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHcccccEccc
menfpiidlsklngderSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEvndldwestfflrhlpvsnmaeipdleddyrsrtvCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLgleegylkkvfygskgptfgtkvsnyppcpkpdlikglrahtdaGGIILLFQDDevsglqllkddqwvdvppmkhsIVINLGdqlevitngkyKSVLHRVIAQtegnrmsiasfynpgsdaviypapalvekeavnsqvypkfVFEDYMKLYAGLkfqakeprFEAMKNMETIVNLGPIATV
menfpiidlsklngdERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFlrhlpvsnmaeipdleddyRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPtfgtkvsnyppCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMetivnlgpiatv
MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAeqllellcenlgleegylKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV
********************MEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAM**METIVN*******
MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQR************VQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNL******
MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV
**NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIV********
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MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query349 2.2.26 [Sep-21-2011]
P31237319 1-aminocyclopropane-1-car N/A no 0.911 0.996 0.771 1e-159
Q08507320 1-aminocyclopropane-1-car N/A no 0.911 0.993 0.749 1e-153
Q08508319 1-aminocyclopropane-1-car N/A no 0.911 0.996 0.74 1e-152
Q08506319 1-aminocyclopropane-1-car N/A no 0.911 0.996 0.731 1e-151
P05116315 1-aminocyclopropane-1-car N/A no 0.899 0.996 0.734 1e-151
Q9MB94319 1-aminocyclopropane-1-car N/A no 0.911 0.996 0.734 1e-150
P24157316 1-aminocyclopropane-1-car N/A no 0.885 0.977 0.725 1e-148
Q43792319 1-aminocyclopropane-1-car N/A no 0.908 0.993 0.723 1e-148
Q8S932318 1-aminocyclopropane-1-car N/A no 0.911 1.0 0.724 1e-148
P54847320 1-aminocyclopropane-1-car N/A no 0.905 0.987 0.718 1e-148
>sp|P31237|ACCO_ACTDE 1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1 Back     alignment and function desciption
 Score =  561 bits (1447), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 270/350 (77%), Positives = 300/350 (85%), Gaps = 32/350 (9%)

Query: 1   MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
           ME FP+ID+ KLNG+ER+ TME I DACENWGFFELVNHGISHEL+DTV+RLTKEHY KC
Sbjct: 1   MEAFPVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKC 60

Query: 61  MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTK 120
           M+QRFK+MVA+KGLEAVQSE+NDLDWESTFFLRHLPVSN++EIPDLE D+          
Sbjct: 61  MEQRFKEMVATKGLEAVQSEINDLDWESTFFLRHLPVSNISEIPDLEQDH---------- 110

Query: 121 AFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYG 180
                                RKAMKEFA +LEK+AEQLL+LLCEN+GLE+GYLKK FYG
Sbjct: 111 ---------------------RKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYG 149

Query: 181 SKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPM 240
           SKGPTFGTKVSNYPPCP+P+LIKGLRAHTDAGGIILLFQD++VSGLQLLKD +W+DVPPM
Sbjct: 150 SKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPM 209

Query: 241 KHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKE 300
           KHSIVIN+GDQLEVITNGKYKSV+HRVIAQ +GNRMSIASFYNPGSDAV+YPAPALV+KE
Sbjct: 210 KHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKE 269

Query: 301 A-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 349
                QVYPKFVFEDYMKLYAGLKFQAKEPRFEAMK ME  VNLGPIAT+
Sbjct: 270 EDQQKQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMENAVNLGPIATI 319

Actinidia deliciosa (taxid: 3627)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 7EC: .EC: 4
>sp|Q08507|ACCO3_PETHY 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1 Back     alignment and function description
>sp|Q08508|ACCO4_PETHY 1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1 Back     alignment and function description
>sp|Q08506|ACCO1_PETHY 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1 Back     alignment and function description
>sp|P05116|ACCO1_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2 Back     alignment and function description
>sp|Q9MB94|ACCO_PRUMU 1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1 Back     alignment and function description
>sp|P24157|ACCO4_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1 Back     alignment and function description
>sp|Q43792|ACCO_TOBAC 1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1 Back     alignment and function description
>sp|Q8S932|ACCO_DIOKA 1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1 Back     alignment and function description
>sp|P54847|ACCO3_CUCME 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
73761685319 ACC oxidase 1 [Gossypium hirsutum] 0.905 0.990 0.806 1e-163
4090533318 ACC oxidase [Carica papaya] gi|38141531| 0.911 1.0 0.787 1e-161
14211818318 ACC oxidase [Carica papaya] gi|42491583| 0.911 1.0 0.787 1e-161
7595984318 ACC oxidase [Carica papaya] 0.911 1.0 0.782 1e-160
54606509318 1-aminocyclopropane-1-carboxylate oxidas 0.911 1.0 0.785 1e-160
117957299312 1-amino-cyclopropane-1-carboxylic acid o 0.893 1.0 0.793 1e-160
224117980318 1-aminocyclopropane-1-carboxylate [Popul 0.911 1.0 0.785 1e-160
224113841318 1-aminocyclopropane-1-carboxylate [Popul 0.911 1.0 0.785 1e-160
17224932318 1-aminocyclopropane-1-carboxylate oxidas 0.911 1.0 0.779 1e-159
343794778317 ACC oxidase 6 [Actinidia chinensis] 0.908 1.0 0.785 1e-159
>gi|73761685|gb|AAZ83342.1| ACC oxidase 1 [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 280/347 (80%), Positives = 300/347 (86%), Gaps = 31/347 (8%)

Query: 3   NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMD 62
            FP+ID SKLNG+ER+A MEMI DACENWGFFELVNHGISHEL+DTV+RLTKEHY KCM+
Sbjct: 4   TFPVIDFSKLNGEERAAAMEMIKDACENWGFFELVNHGISHELMDTVERLTKEHYRKCME 63

Query: 63  QRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAF 122
           QRFK+MVASKGLEAVQSE+ND+DWESTFFLRHLP SNM+EIPDLE+DY            
Sbjct: 64  QRFKEMVASKGLEAVQSEINDMDWESTFFLRHLPESNMSEIPDLEEDY------------ 111

Query: 123 DDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGSK 182
                              RK MKEFAVELEK+AEQLL+LLCENLGLE GYLKKVFYGSK
Sbjct: 112 -------------------RKVMKEFAVELEKLAEQLLDLLCENLGLEPGYLKKVFYGSK 152

Query: 183 GPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKH 242
           GPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD QW+DVPPMKH
Sbjct: 153 GPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMKH 212

Query: 243 SIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV 302
           SIVINLGDQLEVITNGKYKSV+HRVIAQT+G RMSIASFYNPGSDAVIYPAPAL+EKEA 
Sbjct: 213 SIVINLGDQLEVITNGKYKSVMHRVIAQTDGTRMSIASFYNPGSDAVIYPAPALLEKEAD 272

Query: 303 NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 349
            SQVYPKFVFEDYM LYA LKFQAKEPRFEAMK +E+ VNLGPIATV
Sbjct: 273 KSQVYPKFVFEDYMNLYADLKFQAKEPRFEAMKTVESAVNLGPIATV 319

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|4090533|gb|AAC98808.1| ACC oxidase [Carica papaya] gi|38141531|emb|CAE53415.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] gi|54888572|emb|CAH68522.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] Back     alignment and taxonomy information
>gi|14211818|gb|AAK57516.1| ACC oxidase [Carica papaya] gi|42491583|gb|AAS16933.1| 1-aminocyclopropane-1-carboxylate oxidase 1 [Carica papaya] gi|51243480|gb|AAT99444.1| ripening related ACC oxidase 1 [Carica papaya] Back     alignment and taxonomy information
>gi|7595984|gb|AAF64528.1|AF254125_1 ACC oxidase [Carica papaya] Back     alignment and taxonomy information
>gi|54606509|emb|CAH64841.1| 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] Back     alignment and taxonomy information
>gi|117957299|gb|ABK59094.1| 1-amino-cyclopropane-1-carboxylic acid oxidase 3 [Manihot esculenta] Back     alignment and taxonomy information
>gi|224117980|ref|XP_002331528.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|222873752|gb|EEF10883.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113841|ref|XP_002316589.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|222859654|gb|EEE97201.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] Back     alignment and taxonomy information
>gi|17224932|gb|AAL37174.1|AF320071_1 1-aminocyclopropane-1-carboxylate oxidase [Carica papaya] Back     alignment and taxonomy information
>gi|343794778|gb|AEM62885.1| ACC oxidase 6 [Actinidia chinensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
TAIR|locus:2205568323 EFE "ethylene-forming enzyme" 0.593 0.640 0.707 1.9e-121
TAIR|locus:2008905320 AT1G12010 [Arabidopsis thalian 0.584 0.637 0.697 6.9e-115
TAIR|locus:2027099320 ACO2 "ACC oxidase 2" [Arabidop 0.584 0.637 0.692 4.8e-114
TAIR|locus:2050364310 ACO1 "ACC oxidase 1" [Arabidop 0.532 0.6 0.492 2.9e-72
TAIR|locus:2031422307 AT1G77330 [Arabidopsis thalian 0.604 0.687 0.5 1.8e-70
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.487 0.458 0.377 5.2e-43
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.392 0.384 0.388 3.2e-41
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.406 0.416 0.458 1.1e-40
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.346 0.346 0.495 9.4e-40
TAIR|locus:2122679353 AT4G25310 [Arabidopsis thalian 0.487 0.481 0.356 1.2e-39
TAIR|locus:2205568 EFE "ethylene-forming enzyme" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 763 (273.6 bits), Expect = 1.9e-121, Sum P(2) = 1.9e-121
 Identities = 150/212 (70%), Positives = 172/212 (81%)

Query:   142 RKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDL 201
             R  MK+FA ++EK++                  KKVFYGSK PTFGTKVSNYPPCP PDL
Sbjct:   111 RTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDL 170

Query:   202 IKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYK 261
             +KGLRAHTDAGGIILLFQDD+VSGLQLLKD +WVDVPP+KHSIV+NLGDQLEVITNGKYK
Sbjct:   171 VKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYK 230

Query:   262 SVLHRVIAQTEGN-RMSIASFYNPGSDAVIYPAPALVEKEAVNSQV--YPKFVFEDYMKL 318
             SV HRV++QT+G  RMSIASFYNPGSD+VI+PAP L+ KEA   +   YP+FVFEDYMKL
Sbjct:   231 SVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKL 290

Query:   319 YAGLKFQAKEPRFEAMKNMETIV--NLGPIAT 348
             Y+ +KFQAKEPRFEAMK MET V  N+GP+AT
Sbjct:   291 YSAVKFQAKEPRFEAMKAMETTVANNVGPLAT 322
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009693 "ethylene biosynthetic process" evidence=ISS;TAS
GO:0071398 "cellular response to fatty acid" evidence=IEP
GO:0009620 "response to fungus" evidence=IEP
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
GO:0009815 "1-aminocyclopropane-1-carboxylate oxidase activity" evidence=ISS
TAIR|locus:2008905 AT1G12010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027099 ACO2 "ACC oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050364 ACO1 "ACC oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031422 AT1G77330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P07920ACCO2_SOLLC1, ., 1, 4, ., 1, 7, ., 40.70770.89390.9873N/Ano
P31237ACCO_ACTDE1, ., 1, 4, ., 1, 7, ., 40.77140.91110.9968N/Ano
P31239ACCO_PEA1, ., 1, 4, ., 1, 7, ., 40.71630.90831.0N/Ano
P31238ACCO1_DORSP1, ., 1, 4, ., 1, 7, ., 40.63660.90250.9633N/Ano
Q9ZQZ1ACCO_DENCR1, ., 1, 4, ., 1, 7, ., 40.61840.87960.9654N/Ano
P31528ACCO_DIACA1, ., 1, 4, ., 1, 7, ., 40.680.89680.9750N/Ano
Q04644ACCO1_CUCME1, ., 1, 4, ., 1, 7, ., 40.67610.90250.9905N/Ano
Q00985ACCO1_MALDO1, ., 1, 4, ., 1, 7, ., 40.70770.89971.0N/Ano
Q9MB94ACCO_PRUMU1, ., 1, 4, ., 1, 7, ., 40.73420.91110.9968N/Ano
P05116ACCO1_SOLLC1, ., 1, 4, ., 1, 7, ., 40.73420.89970.9968N/Ano
A2Z1W9ACCO1_ORYSI1, ., 1, 4, ., 1, 7, ., 40.65200.86810.9409N/Ano
Q0J1C1ACCO1_ORYSJ1, ., 1, 4, ., 1, 7, ., 40.64910.86810.9409yesno
Q09052ACCO1_BRAJU1, ., 1, 4, ., 1, 7, ., 40.63870.89110.9718N/Ano
Q8S932ACCO_DIOKA1, ., 1, 4, ., 1, 7, ., 40.72490.91111.0N/Ano
Q43792ACCO_TOBAC1, ., 1, 4, ., 1, 7, ., 40.72360.90830.9937N/Ano
P19464ACCO_PERAE1, ., 1, 4, ., 1, 7, ., 40.66570.90250.9843N/Ano
Q06588ACCO4_ARATH1, ., 1, 4, ., 1, 7, ., 40.67790.91110.9845yesno
Q39705ACCO2_DORSP1, ., 1, 4, ., 1, 7, ., 40.63170.90250.9692N/Ano
O48882ACCO2_MALDO1, ., 1, 4, ., 1, 7, ., 40.71680.88250.9333N/Ano
P24157ACCO4_SOLLC1, ., 1, 4, ., 1, 7, ., 40.72590.88530.9778N/Ano
Q08506ACCO1_PETHY1, ., 1, 4, ., 1, 7, ., 40.73140.91110.9968N/Ano
Q08507ACCO3_PETHY1, ., 1, 4, ., 1, 7, ., 40.74920.91110.9937N/Ano
Q08508ACCO4_PETHY1, ., 1, 4, ., 1, 7, ., 40.740.91110.9968N/Ano
P54847ACCO3_CUCME1, ., 1, 4, ., 1, 7, ., 40.71830.90540.9875N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.14.11.4LOW CONFIDENCE prediction!
3rd Layer1.14.170.983
4th Layer1.14.11.11LOW CONFIDENCE prediction!
4th Layer1.14.17.40.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ACO6
1-aminocyclopropane-1-carboxylate (EC-1.14.11.9) (318 aa)
(Populus trichocarpa)
Predicted Functional Partners:
ACS3
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (467 aa)
     •• 0.902
ACS8
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (449 aa)
     •• 0.902
ACS5
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (446 aa)
     •• 0.902
ACS4
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (468 aa)
     •• 0.902
ACS6
1-aminocyclopropane-1-carboxylate (EC-4.4.1.14) (440 aa)
     •  0.899
ACS7
1-aminocyclopropane-1-carboxylate (480 aa)
     •  0.899
ACS2
1-aminocyclopropane-1-carboxylate (486 aa)
     •  0.899
ACS1
SubName- Full=Putative uncharacterized protein; (481 aa)
     •  0.899
gw1.III.1157.1
annotation not avaliable (560 aa)
      • 0.687
CHSL4
chs-like protein (388 aa)
      • 0.510

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 0.0
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-123
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-72
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-60
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 8e-58
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-56
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 9e-54
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-51
PLN02704335 PLN02704, PLN02704, flavonol synthase 4e-51
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-48
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-47
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 4e-47
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 6e-45
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 3e-43
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-41
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 4e-41
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-40
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-37
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 4e-35
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-33
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 3e-32
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 6e-31
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 6e-25
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-23
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 3e-22
PLN02485329 PLN02485, PLN02485, oxidoreductase 4e-20
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 4e-15
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-05
PLN02485329 PLN02485, PLN02485, oxidoreductase 6e-04
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information 
 Score =  652 bits (1685), Expect = 0.0
 Identities = 269/349 (77%), Positives = 301/349 (86%), Gaps = 31/349 (8%)

Query: 1   MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
           ME+FP+ID+ KLNG+ER+ATME+I DACENWGFFELVNHGISHEL+D V+++TKEHY KC
Sbjct: 4   MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKC 63

Query: 61  MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTK 120
           M+QRFK+MVASKGLE VQ+EV DLDWESTFFLRHLP SN+A+IPDL+D+YR         
Sbjct: 64  MEQRFKEMVASKGLEGVQTEVEDLDWESTFFLRHLPESNLADIPDLDDEYR--------- 114

Query: 121 AFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYG 180
                                 K MK+FA+ELEK+AE+LL+LLCENLGLE+GYLKK F+G
Sbjct: 115 ----------------------KVMKDFALELEKLAEELLDLLCENLGLEKGYLKKAFHG 152

Query: 181 SKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPM 240
           SKGPTFGTKVSNYPPCPKPDL+KGLRAHTDAGGIILLFQDD+VSGLQLLKD +WVDVPPM
Sbjct: 153 SKGPTFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPM 212

Query: 241 KHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKE 300
           +HSIV+NLGDQLEVITNGKYKSV+HRV+AQT+GNRMSIASFYNPGSDAVIYPAPALVEKE
Sbjct: 213 RHSIVVNLGDQLEVITNGKYKSVMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKE 272

Query: 301 AVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 349
           A   QVYPKFVFEDYMKLYAGLKFQAKEPRFEAMK MET VNL PIAT 
Sbjct: 273 AEEEQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMETTVNLNPIATA 321

Length = 321
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 349
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02216357 protein SRG1 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02997325 flavonol synthase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02904357 oxidoreductase 100.0
PLN02485329 oxidoreductase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02704335 flavonol synthase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.87
PLN03176120 flavanone-3-hydroxylase; Provisional 99.73
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 95.96
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.17
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 94.15
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.44
TIGR02466201 conserved hypothetical protein. This family consis 87.98
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information 
Probab=100.00  E-value=8.2e-80  Score=579.50  Aligned_cols=317  Identities=85%  Similarity=1.366  Sum_probs=280.7

Q ss_pred             CCCCcEEeCCCCCCCcHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhhhcCCCccccccc
Q 018920            1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE   80 (349)
Q Consensus         1 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~Gy~~~~~e   80 (349)
                      |++||+|||+.+.+.++.+++++|++||++||||||+|||||.++++++++++++||+||.|+|+++....+||.++..+
T Consensus         4 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~~~gy~~~~~~   83 (321)
T PLN02299          4 MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVASKGLEGVQTE   83 (321)
T ss_pred             CCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccCCCCccccccc
Confidence            57899999999876667788999999999999999999999999999999999999999999999876667899877666


Q ss_pred             ccCCCcccccccccCCCCCCCCCCCCccccccccccccccccccccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 018920           81 VNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLL  160 (349)
Q Consensus        81 ~~~~d~~e~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Wp~~~~f~~~~~~y~~~~~~la~~ll  160 (349)
                      ....||+|.|++...|..+.+.||+.++.                               ||+.+++|+++|.+|+.+||
T Consensus        84 ~~~~d~ke~~~~~~~~~~~~~~wP~~~~~-------------------------------fr~~~~~y~~~~~~l~~~ll  132 (321)
T PLN02299         84 VEDLDWESTFFLRHLPESNLADIPDLDDE-------------------------------YRKVMKDFALELEKLAEELL  132 (321)
T ss_pred             CCCcCHHHHcccccCCccccccCccccHH-------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence            56678999987654333333445544443                               55999999999999999999


Q ss_pred             HHHHHHcCCCchhhHHhhcCCCCCceeeeeeecCCCCCCccCCCCCCccCCCceeEEEecCCCCeeEEEeCCcEEEcCCC
Q 018920          161 ELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPM  240 (349)
Q Consensus       161 ~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~~GLqV~~~g~W~~V~p~  240 (349)
                      ++|+++||+++++|.+.+....++.+.||++|||||+.++...|+++|||+|+||||+||+.++||||+++|+|++|+|.
T Consensus       133 ~~la~~Lgl~~~~f~~~~~~~~~~~~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~  212 (321)
T PLN02299        133 DLLCENLGLEKGYLKKAFHGSKGPTFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPM  212 (321)
T ss_pred             HHHHHHcCCCHHHHHHHhcCCCCccceeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCcccCCeEEECCCC
Confidence            99999999999999988754333456799999999998888889999999999999999756999999989999999999


Q ss_pred             CCcEEEEchhHHHHHhCCccccccccccCCCCCCeeeEEEeecCCCCceeecCccccccccCCCCCCCCcCHHHHHHHHH
Q 018920          241 KHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYA  320 (349)
Q Consensus       241 pg~lvVnvGd~l~~~SnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~~~y~~~~~~e~~~~~~  320 (349)
                      ||++||||||+||+||||+|||++|||+.++..+||||+||++|+.|++|+|+++|+++++.+|++|+|++++||++.+.
T Consensus       213 pg~lvVNiGD~l~~~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~  292 (321)
T PLN02299        213 RHSIVVNLGDQLEVITNGKYKSVMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYA  292 (321)
T ss_pred             CCeEEEEeCHHHHHHhCCceecccceeecCCCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHH
Confidence            99999999999999999999999999998888899999999999999999999999987544689999999999999999


Q ss_pred             ccccCCCchhhhhhhchhhhhhcCCCcC
Q 018920          321 GLKFQAKEPRFEAMKNMETIVNLGPIAT  348 (349)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (349)
                      ++....+..+++.+|+.++-.++.||+|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (321)
T PLN02299        293 GLKFQAKEPRFEAMKAMETTVNLNPIAT  320 (321)
T ss_pred             HcccCCccchhhhhhccccccccCccCC
Confidence            8888776677999999999999999987

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-131
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-27
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-27
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 1e-26
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-08
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-07
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 7e-04
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 7e-04
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 7e-04
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure 
Iteration: 1

 Score =  465 bits (1196), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/349 (66%), Positives = 259/349 (74%), Gaps = 32/349 (9%)
Query: 2   ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCM 61
           ENFPII L K+NG ER+AT E I DACENWGFFELVNHGI  E+ DTV++ TK HY KC 
Sbjct: 2   ENFPIISLDKVNGVERAATXEXIKDACENWGFFELVNHGIPREVXDTVEKXTKGHYKKCX 61
Query: 62  DQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKA 121
           +QRFK++VASK LE VQ+EV D DWESTFFL+HLP+SN++E+PDL+++YR          
Sbjct: 62  EQRFKELVASKALEGVQAEVTDXDWESTFFLKHLPISNISEVPDLDEEYR---------- 111
Query: 122 FDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGS 181
                                +  ++FA  LEK+A                  K  FYGS
Sbjct: 112 ---------------------EVXRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGS 150
Query: 182 KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMK 241
           KGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD QW+DVPP +
Sbjct: 151 KGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPXR 210
Query: 242 HSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA 301
           HSIV+NLGDQLEVITNGKYKSV HRVIAQ +G R S+ASFYNPGSDAVIYPAPALVEKEA
Sbjct: 211 HSIVVNLGDQLEVITNGKYKSVXHRVIAQKDGARXSLASFYNPGSDAVIYPAPALVEKEA 270
Query: 302 -VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 349
             N QVYPKFVF+DY KLYAGLKFQAKEPRFEA K  ET V   PIATV
Sbjct: 271 EENKQVYPKFVFDDYXKLYAGLKFQAKEPRFEAXKAXETDVKXDPIATV 319
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-176
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-140
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 6e-72
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-65
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 6e-62
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 5e-60
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
 Score =  490 bits (1265), Expect = e-176
 Identities = 256/350 (73%), Positives = 292/350 (83%), Gaps = 32/350 (9%)

Query: 1   MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKC 60
           MENFPII L K+NG ER+ATMEMI DACENWGFFELVNHGI  E++DTV+++TK HY KC
Sbjct: 1   MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKC 60

Query: 61  MDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTK 120
           M+QRFK++VASK LE VQ+EV D+DWESTFFL+HLP+SN++E+PDL+++Y          
Sbjct: 61  MEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEY---------- 110

Query: 121 AFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYG 180
                                R+ M++FA  LEK+AE+LL+LLCENLGLE+GYLK  FYG
Sbjct: 111 ---------------------REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYG 149

Query: 181 SKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPM 240
           SKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD QW+DVPPM
Sbjct: 150 SKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPM 209

Query: 241 KHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKE 300
           +HSIV+NLGDQLEVITNGKYKSV+HRVIAQ +G RMS+ASFYNPGSDAVIYPAPALVEKE
Sbjct: 210 RHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKE 269

Query: 301 AV-NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 349
           A  N QVYPKFVF+DYMKLYAGLKFQAKEPRFEAMK MET V + PIATV
Sbjct: 270 AEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIATV 319
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query349
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 94.38
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.33
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 94.28
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 91.1
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 89.2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
Probab=100.00  E-value=6.7e-83  Score=600.56  Aligned_cols=317  Identities=79%  Similarity=1.279  Sum_probs=268.0

Q ss_pred             CCCCcEEeCCCCCCCcHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhhhcCCCccccccc
Q 018920            1 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSE   80 (349)
Q Consensus         1 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~Gy~~~~~e   80 (349)
                      |++||||||+.+.+.++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++....+||.+.+.+
T Consensus         1 m~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~~e   80 (319)
T 1w9y_A            1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAE   80 (319)
T ss_dssp             -CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             CCCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCccccc
Confidence            78999999999865668889999999999999999999999999999999999999999999999876555688877766


Q ss_pred             ccCCCcccccccccCCCCCCCCCCCCccccccccccccccccccccccccccchhhhh-hhhHHHHHHHHHHHHHHHHHH
Q 018920           81 VNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHV-LFNRKAMKEFAVELEKVAEQL  159 (349)
Q Consensus        81 ~~~~d~~e~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Wp~~-~~f~~~~~~y~~~~~~la~~l  159 (349)
                      .+..||+|.|++...|...                                +|.||.. +.||+.+++|+++|.+|+.+|
T Consensus        81 ~~~~d~ke~~~~~~~p~~~--------------------------------~~~wP~~~~~fr~~~~~y~~~~~~l~~~l  128 (319)
T 1w9y_A           81 VTDMDWESTFFLKHLPISN--------------------------------ISEVPDLDEEYREVMRDFAKRLEKLAEEL  128 (319)
T ss_dssp             GGGCCCCEEEEEEEESCCG--------------------------------GGGCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCChhhheeeecCCccc--------------------------------ccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            6778999999876433222                                2455543 356699999999999999999


Q ss_pred             HHHHHHHcCCCchhhHHhhcCCCCCceeeeeeecCCCCCCccCCCCCCccCCCceeEEEecCCCCeeEEEeCCcEEEcCC
Q 018920          160 LELLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPP  239 (349)
Q Consensus       160 l~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~~GLqV~~~g~W~~V~p  239 (349)
                      |++|+++||+++++|.+.+...+++.+.+|++|||||+.++...|+++|||+|+||||+||+.++||||+++|+|++|+|
T Consensus       129 l~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p  208 (319)
T 1w9y_A          129 LDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPP  208 (319)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCC
T ss_pred             HHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEccc
Confidence            99999999999999999886433355789999999999988889999999999999999965699999999999999999


Q ss_pred             CCCcEEEEchhHHHHHhCCccccccccccCCCCCCeeeEEEeecCCCCceeecCccccccccC-CCCCCCCcCHHHHHHH
Q 018920          240 MKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAV-NSQVYPKFVFEDYMKL  318 (349)
Q Consensus       240 ~pg~lvVnvGd~l~~~SnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~-~~~~y~~~~~~e~~~~  318 (349)
                      .||++||||||+||+||||+||||+|||+++++.+|||++||++|+.|++|.|+++|++++.. +|++|+++|++||++.
T Consensus       209 ~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~  288 (319)
T 1w9y_A          209 MRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKL  288 (319)
T ss_dssp             CTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHT
T ss_pred             CCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHH
Confidence            999999999999999999999999999999888899999999999999999999999986411 3899999999999999


Q ss_pred             HHccccCCCchhhhhhhchhhhhhcCCCcCC
Q 018920          319 YAGLKFQAKEPRFEAMKNMETIVNLGPIATV  349 (349)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (349)
                      +++.++.++..+++.+|++++.+..+||||+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (319)
T 1w9y_A          289 YAGLKFQAKEPRFEAMKAMETDVKMDPIATV  319 (319)
T ss_dssp             TTTTTCSSHHHHHHHHHHC------------
T ss_pred             HHhhhcCcchhHHHHHHHHhhhcccCCcccC
Confidence            9998888887779999999999999999996
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 349
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 6e-99
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-59
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-46
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 4e-42
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  292 bits (749), Expect = 6e-99
 Identities = 248/338 (73%), Positives = 283/338 (83%), Gaps = 32/338 (9%)

Query: 2   ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCM 61
           ENFPII L K+NG ER+ATMEMI DACENWGFFELVNHGI  E++DTV+++TK HY KCM
Sbjct: 1   ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCM 60

Query: 62  DQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKA 121
           +QRFK++VASK LE VQ+EV D+DWESTFFL+HLP+SN++E+PDL+++YR          
Sbjct: 61  EQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYR---------- 110

Query: 122 FDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLELLCENLGLEEGYLKKVFYGS 181
                                + M++FA  LEK+AE+LL+LLCENLGLE+GYLK  FYGS
Sbjct: 111 ---------------------EVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGS 149

Query: 182 KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMK 241
           KGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD QW+DVPPM+
Sbjct: 150 KGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMR 209

Query: 242 HSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA 301
           HSIV+NLGDQLEVITNGKYKSV+HRVIAQ +G RMS+ASFYNPGSDAVIYPAPALVEKEA
Sbjct: 210 HSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEA 269

Query: 302 V-NSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNME 338
             N QVYPKFVF+DYMKLYAGLKFQAKEPRFEAMK ME
Sbjct: 270 EENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAME 307
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query349
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 88.48
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=100.00  E-value=4.5e-78  Score=564.57  Aligned_cols=306  Identities=81%  Similarity=1.349  Sum_probs=269.3

Q ss_pred             CCCcEEeCCCCCCCcHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhhhcCCCcccccccc
Q 018920            2 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEV   81 (349)
Q Consensus         2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~Gy~~~~~e~   81 (349)
                      ++||||||+.+++.+|++++++|++||+++|||||+|||||.++++++++.+++||++|.|+|+++.....+|.++..+.
T Consensus         1 ~~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~~~~   80 (307)
T d1w9ya1           1 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV   80 (307)
T ss_dssp             CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred             CCCCeEECcccCCcCHHHHHHHHHHHHHcCeEEEEEcCCCCHHHHHHHHHHHHHHHhCcHHHhhhhhcCCCCCcCccccc
Confidence            47999999999888899999999999999999999999999999999999999999999999988665555555555566


Q ss_pred             cCCCcccccccccCCCCCCCCCCCCccccccccccccccccccccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 018920           82 NDLDWESTFFLRHLPVSNMAEIPDLEDDYRSRTVCTYTKAFDDFVVNKHVYSIWLHVLFNRKAMKEFAVELEKVAEQLLE  161 (349)
Q Consensus        82 ~~~d~~e~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Wp~~~~f~~~~~~y~~~~~~la~~ll~  161 (349)
                      ...||+|.|++...+..+.+.||+.++.|                               ++.+++|++.|.+|+.+|++
T Consensus        81 ~~~d~~e~~~~~~~~~~~~~~~~~~~~~f-------------------------------r~~~~~y~~~~~~la~~ll~  129 (307)
T d1w9ya1          81 TDMDWESTFFLKHLPISNISEVPDLDEEY-------------------------------REVMRDFAKRLEKLAEELLD  129 (307)
T ss_dssp             GGCCCCEEEEEEEESCCGGGGCTTCCHHH-------------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred             cccChhhhcccccccccCcccCCccchHH-------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence            67899999877654444444455555554                               49999999999999999999


Q ss_pred             HHHHHcCCCchhhHHhhcCCCCCceeeeeeecCCCCCCccCCCCCCccCCCceeEEEecCCCCeeEEEeCCcEEEcCCCC
Q 018920          162 LLCENLGLEEGYLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMK  241 (349)
Q Consensus       162 ~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~~~GLqV~~~g~W~~V~p~p  241 (349)
                      +|+++||+++++|.+.+..+.++.+.+|++||||++.++...|+++|||+|+||||+|++.++||||.++|+|++|+|.|
T Consensus       130 ~la~~Lgl~~~~f~~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~~~g~Wi~v~p~~  209 (307)
T d1w9ya1         130 LLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMR  209 (307)
T ss_dssp             HHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCT
T ss_pred             HHHHHcCCchHHHHhhhhccccccccceecCCCCCcccccccccccccccceeEEeeccCCCCeEEEecCCcEEEeccCC
Confidence            99999999999999988655556778999999999998888999999999999999998678999999999999999999


Q ss_pred             CcEEEEchhHHHHHhCCccccccccccCCCCCCeeeEEEeecCCCCceeecCccccccc-cCCCCCCCCcCHHHHHHHHH
Q 018920          242 HSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKE-AVNSQVYPKFVFEDYMKLYA  320 (349)
Q Consensus       242 g~lvVnvGd~l~~~SnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~-~~~~~~y~~~~~~e~~~~~~  320 (349)
                      |++|||+||+||+||||+||||.|||+.+++.+||||+||++|+.|++|+|+++|++.. ..+|++|+|||++||++.++
T Consensus       210 ~~~vVnvGD~l~~~Tng~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~  289 (307)
T d1w9ya1         210 HSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYA  289 (307)
T ss_dssp             TCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTT
T ss_pred             CeEEEEcchhhHHhhCCcccCcCceeecCCCCCcEEEEEEeeCCCCCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHH
Confidence            99999999999999999999999999998888999999999999999999999999743 23689999999999999999


Q ss_pred             ccccCCCchhhhhhhchh
Q 018920          321 GLKFQAKEPRFEAMKNME  338 (349)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~  338 (349)
                      +.+++.|+++++++|-++
T Consensus       290 ~~~~~~~~~~~~~~~~~~  307 (307)
T d1w9ya1         290 GLKFQAKEPRFEAMKAME  307 (307)
T ss_dssp             TTTCSSHHHHHHHHHHC-
T ss_pred             hccCCcccHHHHHhhccC
Confidence            999999998999998764
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure