Query 018922
Match_columns 349
No_of_seqs 185 out of 1488
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:08:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 5.5E-81 1.9E-85 611.3 37.8 330 17-348 2-331 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 1.5E-77 5.2E-82 591.4 38.0 343 2-348 13-358 (520)
3 3ifg_A Succinate-semialdehyde 100.0 1.5E-76 5.3E-81 580.3 37.8 326 19-348 10-336 (484)
4 3rh9_A Succinate-semialdehyde 100.0 5.4E-76 1.9E-80 578.5 40.4 326 19-348 9-335 (506)
5 1bxs_A Aldehyde dehydrogenase; 100.0 1E-75 3.5E-80 576.4 40.5 327 21-348 20-348 (501)
6 3b4w_A Aldehyde dehydrogenase; 100.0 1.1E-75 3.7E-80 575.8 40.2 331 16-348 3-333 (495)
7 2o2p_A Formyltetrahydrofolate 100.0 8.5E-76 2.9E-80 578.5 38.5 326 22-348 37-367 (517)
8 3ek1_A Aldehyde dehydrogenase; 100.0 6.6E-76 2.3E-80 577.7 36.7 325 20-348 31-356 (504)
9 3k2w_A Betaine-aldehyde dehydr 100.0 1.6E-75 5.4E-80 575.3 37.2 329 16-348 7-336 (497)
10 1a4s_A ALDH, betaine aldehyde 100.0 3.5E-75 1.2E-79 573.2 39.6 327 17-348 15-342 (503)
11 3u4j_A NAD-dependent aldehyde 100.0 3.7E-75 1.3E-79 575.3 39.7 326 19-348 20-349 (528)
12 4e4g_A Methylmalonate-semialde 100.0 2E-75 6.8E-80 576.4 37.1 334 10-348 15-350 (521)
13 3i44_A Aldehyde dehydrogenase; 100.0 3.6E-75 1.2E-79 572.0 38.6 325 19-348 23-348 (497)
14 4f3x_A Putative aldehyde dehyd 100.0 2.6E-75 8.9E-80 573.1 37.3 325 19-348 23-348 (498)
15 2ve5_A BADH, betaine aldehyde 100.0 6.8E-75 2.3E-79 570.9 38.3 330 16-348 1-331 (490)
16 3iwj_A Putative aminoaldehyde 100.0 8.9E-75 3E-79 570.8 38.8 328 19-348 5-339 (503)
17 1o04_A Aldehyde dehydrogenase, 100.0 7.5E-75 2.6E-79 570.1 36.7 325 23-348 21-347 (500)
18 3r31_A BADH, betaine aldehyde 100.0 3.9E-75 1.3E-79 573.9 34.6 323 18-348 11-337 (517)
19 1wnd_A Putative betaine aldehy 100.0 8.5E-75 2.9E-79 569.1 36.9 331 13-348 15-346 (495)
20 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.1E-74 3.6E-79 571.4 36.8 323 22-348 27-350 (515)
21 3qan_A 1-pyrroline-5-carboxyla 100.0 2.8E-74 9.5E-79 570.3 38.2 323 20-348 36-366 (538)
22 3jz4_A Succinate-semialdehyde 100.0 2E-74 6.8E-79 566.1 36.8 326 19-348 7-333 (481)
23 2imp_A Lactaldehyde dehydrogen 100.0 1.9E-74 6.5E-79 565.9 36.0 325 20-348 5-331 (479)
24 3prl_A NADP-dependent glyceral 100.0 4.1E-74 1.4E-78 565.5 36.5 321 21-348 11-337 (505)
25 3ty7_A Putative aldehyde dehyd 100.0 5.9E-74 2E-78 562.6 33.8 326 16-348 2-327 (478)
26 2w8n_A Succinate-semialdehyde 100.0 8.9E-74 3.1E-78 561.6 34.0 321 22-348 13-338 (487)
27 4dng_A Uncharacterized aldehyd 100.0 1.4E-73 4.9E-78 560.8 35.1 326 19-348 4-332 (485)
28 1t90_A MMSDH, probable methylm 100.0 3.5E-73 1.2E-77 557.5 36.1 324 19-348 3-328 (486)
29 1uzb_A 1-pyrroline-5-carboxyla 100.0 3E-73 1E-77 561.5 34.8 321 21-348 37-366 (516)
30 1euh_A NADP dependent non phos 100.0 3.7E-73 1.3E-77 556.2 35.2 320 20-348 3-328 (475)
31 3pqa_A Lactaldehyde dehydrogen 100.0 4.2E-73 1.4E-77 555.9 34.5 315 24-348 2-320 (486)
32 3r64_A NAD dependent benzaldeh 100.0 7E-73 2.4E-77 557.9 36.3 326 19-348 10-339 (508)
33 2j6l_A Aldehyde dehydrogenase 100.0 1.1E-72 3.8E-77 555.5 37.6 322 20-348 22-348 (500)
34 1uxt_A Glyceraldehyde-3-phosph 100.0 9.1E-73 3.1E-77 555.8 35.1 320 21-348 18-342 (501)
35 3ju8_A Succinylglutamic semial 100.0 4.9E-72 1.7E-76 550.0 37.4 321 22-348 6-329 (490)
36 3ros_A NAD-dependent aldehyde 100.0 6.3E-72 2.2E-76 547.3 33.8 306 38-348 5-310 (484)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 1.4E-71 5E-76 552.1 33.4 324 19-348 61-394 (563)
38 4f9i_A Proline dehydrogenase/d 100.0 3.4E-70 1.2E-74 570.1 35.0 324 20-348 530-860 (1026)
39 3etf_A Putative succinate-semi 100.0 1.6E-69 5.4E-74 529.4 34.6 308 36-348 6-313 (462)
40 2y53_A Aldehyde dehydrogenase 100.0 7.6E-70 2.6E-74 539.6 30.5 319 21-348 7-344 (534)
41 4h7n_A Aldehyde dehydrogenase; 100.0 4.4E-68 1.5E-72 520.2 30.9 307 34-348 3-311 (474)
42 3v4c_A Aldehyde dehydrogenase 100.0 2.6E-67 8.9E-72 520.8 31.7 316 17-347 25-362 (528)
43 3lns_A Benzaldehyde dehydrogen 100.0 1.4E-65 4.8E-70 500.3 34.8 301 37-348 6-310 (457)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 1.8E-64 6.3E-69 498.4 31.1 297 33-333 3-320 (510)
45 3haz_A Proline dehydrogenase; 100.0 2.6E-63 8.8E-68 517.3 32.2 292 53-348 544-839 (1001)
46 3sza_A Aldehyde dehydrogenase, 100.0 7.2E-63 2.5E-67 481.8 33.0 287 55-348 14-304 (469)
47 3k9d_A LMO1179 protein, aldehy 100.0 1.4E-58 4.6E-63 451.9 23.5 287 52-348 5-304 (464)
48 2h5g_A Delta 1-pyrroline-5-car 100.0 2.7E-58 9.4E-63 448.5 19.8 277 40-327 10-305 (463)
49 3my7_A Alcohol dehydrogenase/a 100.0 2.2E-56 7.5E-61 434.9 26.5 264 53-326 1-269 (452)
50 4ghk_A Gamma-glutamyl phosphat 100.0 1.5E-55 5E-60 428.0 24.7 269 58-336 25-315 (444)
51 1vlu_A Gamma-glutamyl phosphat 100.0 8.1E-56 2.8E-60 431.6 17.9 266 60-336 15-305 (468)
52 1o20_A Gamma-glutamyl phosphat 100.0 7.5E-55 2.6E-59 421.0 24.1 265 58-332 13-296 (427)
53 4gic_A HDH, histidinol dehydro 93.1 5.7 0.00019 37.1 23.6 239 77-330 27-298 (423)
54 3fxd_A Protein ICMQ; helix bun 72.6 11 0.00038 24.3 5.5 47 56-108 5-51 (57)
55 1kae_A HDH, histidinol dehydro 71.6 66 0.0023 30.1 21.3 194 122-330 87-292 (434)
56 1b93_A Protein (methylglyoxal 69.6 10 0.00036 30.2 6.1 114 161-300 12-135 (152)
57 3v4g_A Arginine repressor; vib 66.2 21 0.00071 29.3 7.4 39 184-225 114-152 (180)
58 3v42_A Folliculin; tumor suppr 64.4 7.7 0.00026 33.1 4.7 69 177-253 21-89 (226)
59 2yvq_A Carbamoyl-phosphate syn 64.1 11 0.00036 29.7 5.2 62 206-269 60-131 (143)
60 2xw6_A MGS, methylglyoxal synt 61.9 2.9 9.9E-05 32.7 1.4 81 178-269 22-111 (134)
61 1vmd_A MGS, methylglyoxal synt 52.7 13 0.00045 30.4 3.9 119 156-300 22-151 (178)
62 1b4b_A Arginine repressor; cor 46.5 43 0.0015 22.6 5.3 56 186-258 12-67 (71)
63 2zfz_A Arginine repressor; DNA 46.2 46 0.0016 23.0 5.5 36 186-225 20-55 (79)
64 3pzy_A MOG; ssgcid, seattle st 45.2 15 0.0005 29.6 3.1 51 200-251 27-79 (164)
65 1xxa_A ARGR, arginine represso 41.7 36 0.0012 23.6 4.3 37 186-225 14-50 (78)
66 2p5m_A Arginine repressor; alp 41.1 42 0.0014 23.5 4.7 56 186-258 24-79 (83)
67 2ioj_A Hypothetical protein AF 39.9 25 0.00085 27.1 3.7 44 217-260 53-96 (139)
68 1y5e_A Molybdenum cofactor bio 39.0 30 0.001 27.8 4.1 52 200-251 31-85 (169)
69 3iwt_A 178AA long hypothetical 37.6 48 0.0016 26.6 5.2 52 200-251 40-94 (178)
70 3rfq_A Pterin-4-alpha-carbinol 37.6 18 0.00061 29.8 2.5 54 199-252 48-103 (185)
71 2bon_A Lipid kinase; DAG kinas 35.8 90 0.0031 27.8 7.3 103 190-296 34-146 (332)
72 1b4a_A Arginine repressor; hel 30.5 82 0.0028 24.8 5.3 56 186-258 90-145 (149)
73 2pjk_A 178AA long hypothetical 27.8 30 0.001 28.1 2.3 54 198-251 38-94 (178)
74 3lap_A Arginine repressor; arg 26.8 1.1E+02 0.0037 24.7 5.5 39 183-225 108-146 (170)
75 3ce8_A Putative PII-like nitro 26.6 87 0.003 23.7 4.6 35 264-312 77-111 (120)
76 1wu2_A MOEA protein, molybdopt 26.0 15 0.00053 34.1 0.2 53 200-252 211-264 (396)
77 2i2c_A Probable inorganic poly 25.8 83 0.0028 27.2 5.0 88 190-295 5-94 (272)
78 3fgh_A Transcription factor A, 23.9 75 0.0026 20.7 3.4 35 68-104 30-64 (67)
79 1use_A VAsp, vasodilator-stimu 22.9 92 0.0032 19.1 3.2 27 86-112 14-40 (45)
80 1mkz_A Molybdenum cofactor bio 22.5 56 0.0019 26.3 3.0 52 200-251 28-82 (172)
81 1uz5_A MOEA protein, 402AA lon 20.5 41 0.0014 31.3 2.0 52 201-252 208-260 (402)
82 3kbq_A Protein TA0487; structu 20.3 67 0.0023 26.0 3.0 52 200-251 23-75 (172)
83 4g6u_B EC869 CDII; beta-augmen 20.0 2E+02 0.0069 23.3 5.7 83 23-113 12-97 (177)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=5.5e-81 Score=611.28 Aligned_cols=330 Identities=41% Similarity=0.704 Sum_probs=315.6
Q ss_pred ccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 018922 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (349)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (349)
..+.+.++||||+|+.+.++++++++||+||++|++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|
T Consensus 2 ~~~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l 79 (490)
T 2wme_A 2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDIL 79 (490)
T ss_dssp CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHH
Confidence 445677899999999988889999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhh
Q 018922 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (349)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 176 (349)
++++++|++++++|+|||+.+++..|+..+++.++||+.+.+.+.++..+...+...+++|+|+|||++|+|||||+...
T Consensus 80 ~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 159 (490)
T 2wme_A 80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhh
Confidence 99999999999999999999998557999999999999999988888777666677889999999999999999999999
Q ss_pred HHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 018922 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (349)
Q Consensus 177 ~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (349)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++
T Consensus 160 ~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (490)
T 2wme_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred hhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999987
Q ss_pred HHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCC
Q 018922 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (349)
Q Consensus 257 ~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~ 336 (349)
.++.+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+
T Consensus 240 ~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~ 319 (490)
T 2wme_A 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319 (490)
T ss_dssp HHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred hhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCc
Confidence 66555899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCC
Q 018922 337 DPAVRQGPQVLI 348 (349)
Q Consensus 337 ~~~~~~Gpl~~~ 348 (349)
++++++|||+++
T Consensus 320 ~~~~~~Gpli~~ 331 (490)
T 2wme_A 320 DENTNFGPLVSF 331 (490)
T ss_dssp STTCCBCCCSCH
T ss_pred cccCccCCcCCH
Confidence 999999999974
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.5e-77 Score=591.40 Aligned_cols=343 Identities=37% Similarity=0.636 Sum_probs=318.6
Q ss_pred CCCCCCCcccccccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhc--ccCCCCC
Q 018922 2 EGSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPR 79 (349)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~--~~~~w~~ 79 (349)
+++++++...+-+....+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| + .|+.
T Consensus 13 ~~~~~~~~~~~~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~ 90 (520)
T 3ed6_A 13 LGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQ 90 (520)
T ss_dssp ------CHHHHHHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTT
T ss_pred cCCCCccccccccccccccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--cccc
Confidence 46777777777655555667789999999987778899999999999999999999999999999999999 7 8999
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEee
Q 018922 80 FSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLRE 158 (349)
Q Consensus 80 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 158 (349)
++..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++|++...+++.+...+.. .+...+++++
T Consensus 91 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 169 (520)
T 3ed6_A 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKE 169 (520)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCccccccc
Confidence 9999999999999999999999999999999999999998 5999999999999999888776655433 3456788999
Q ss_pred cceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCC
Q 018922 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 238 (349)
Q Consensus 159 P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~ 238 (349)
|+|||++|+|||||+...+++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+
T Consensus 170 P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~ 249 (520)
T 3ed6_A 170 PVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKE 249 (520)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTT
T ss_pred CccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred CCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHH
Q 018922 239 IDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318 (349)
Q Consensus 239 v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~ 318 (349)
|+.|+||||+.+|+.|++.++. ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+
T Consensus 250 vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~ 328 (520)
T 3ed6_A 250 VDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328 (520)
T ss_dssp CSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHH
T ss_pred cCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHH
Confidence 9999999999999999999988 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 319 f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~ 348 (349)
|+++|.++++++++|||+|+++++|||+++
T Consensus 329 f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~ 358 (520)
T 3ed6_A 329 FEQALIDRVKKIKLGNGFDADTEMGPVIST 358 (520)
T ss_dssp HHHHHHHHHTTCCBCCTTSTTCSBCCCSCH
T ss_pred HHHHHHHHHHhccCCCCccCCCcccccCCH
Confidence 999999999999999999999999999974
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.5e-76 Score=580.34 Aligned_cols=326 Identities=37% Similarity=0.628 Sum_probs=309.9
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (484)
T 3ifg_A 10 LLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIA 87 (484)
T ss_dssp GSCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3455799999999877788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (349)
++++|++++++|+|||+.+++ .|+..+++.++|++...++..+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 166 (484)
T 3ifg_A 88 NSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIA 166 (484)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHH
Confidence 999999999999999999998 6999999999999998877766554432 34567889999999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 167 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~ 246 (484)
T 3ifg_A 167 RKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQ 246 (484)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (349)
Q Consensus 258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~ 337 (349)
++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||++
T Consensus 247 aa~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 325 (484)
T 3ifg_A 247 SAP-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTE 325 (484)
T ss_dssp TGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hhc-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCC
Q 018922 338 PAVRQGPQVLI 348 (349)
Q Consensus 338 ~~~~~Gpl~~~ 348 (349)
+++++|||+++
T Consensus 326 ~~~~~Gpli~~ 336 (484)
T 3ifg_A 326 SGATLGPLINE 336 (484)
T ss_dssp TTCCBCCCSSH
T ss_pred CCCCCCCCcCH
Confidence 99999999984
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=5.4e-76 Score=578.54 Aligned_cols=326 Identities=33% Similarity=0.578 Sum_probs=311.3
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4566899999999877788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEe-ecceeEEEEcCCCccHHhhH
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~ 177 (349)
++++|++++++|+|||+.+++ .|+..+++.++|+++..+++.+...+...+...++++ +|+|||++|+|||||+...+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999998 7999999999999999988877655443445567888 99999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+|+.|+||||+++|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (349)
Q Consensus 258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~ 337 (349)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCC
Q 018922 338 PAVRQGPQVLI 348 (349)
Q Consensus 338 ~~~~~Gpl~~~ 348 (349)
+++++|||+++
T Consensus 325 ~~~~~Gpli~~ 335 (506)
T 3rh9_A 325 DGIDIGPLINK 335 (506)
T ss_dssp TTCSBCCCSCH
T ss_pred cCCcccccCCH
Confidence 99999999984
No 5
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1e-75 Score=576.39 Aligned_cols=327 Identities=54% Similarity=0.918 Sum_probs=308.0
Q ss_pred ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHh
Q 018922 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEH 99 (349)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~ 99 (349)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 3468999999987667789999999999999999999999999999999999732 499999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHH
Q 018922 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (349)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 179 (349)
+++|++++++|+|||+.++...|+..+++.++|+++..+++.+...+...+...+++++|+|||++|+|||||+...+++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 99999999999999999876579999999999999998887766444333445688999999999999999999999999
Q ss_pred HHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (349)
Q Consensus 180 ~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a 259 (349)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred -hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCC
Q 018922 260 -TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (349)
Q Consensus 260 -~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~ 338 (349)
. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+|+
T Consensus 260 ~~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 338 (501)
T 1bxs_A 260 KS-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTP 338 (501)
T ss_dssp HT-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTST
T ss_pred hc-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCccc
Confidence 6 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCC
Q 018922 339 AVRQGPQVLI 348 (349)
Q Consensus 339 ~~~~Gpl~~~ 348 (349)
++++|||+++
T Consensus 339 ~~~~Gpli~~ 348 (501)
T 1bxs_A 339 GVSQGPQIDK 348 (501)
T ss_dssp TCCBCCCSCH
T ss_pred CCccCCCcCH
Confidence 9999999984
No 6
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-75 Score=575.83 Aligned_cols=331 Identities=38% Similarity=0.634 Sum_probs=310.3
Q ss_pred CccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (349)
Q Consensus 16 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (349)
+.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|.|+.++..+|.++|+++++.
T Consensus 3 ~~~~~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~ 82 (495)
T 3b4w_A 3 DSATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKM 82 (495)
T ss_dssp -CCEECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHH
T ss_pred CccccccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHH
Confidence 33444557899999998766778999999999999999999999999999999999974459999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHh
Q 018922 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (349)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (349)
|++++++|++++++|+|||+.+++..|+..+++.++|+++.++++.++..+...+...++.++|+|||++|+|||||+..
T Consensus 83 l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 162 (495)
T 3b4w_A 83 LAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFL 162 (495)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHH
Confidence 99999999999999999999998646999999999999999888777654433334568899999999999999999999
Q ss_pred hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (349)
Q Consensus 176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (349)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+|+.|+||||+.+|+.|+
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 163 AVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 888999999999999999999999999999
Q ss_pred HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (349)
Q Consensus 256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p 335 (349)
+.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||
T Consensus 242 ~~aa~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 320 (495)
T 3b4w_A 242 RRAAE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPP 320 (495)
T ss_dssp HHHHH-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCT
T ss_pred HHhhh-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCC
Confidence 99987 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCC
Q 018922 336 FDPAVRQGPQVLI 348 (349)
Q Consensus 336 ~~~~~~~Gpl~~~ 348 (349)
+++++++|||+++
T Consensus 321 ~~~~~~~gpli~~ 333 (495)
T 3b4w_A 321 SDPAAQIGPLISE 333 (495)
T ss_dssp TCTTCCBCCCSCH
T ss_pred ccCCCccCCCcCH
Confidence 9999999999984
No 7
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=8.5e-76 Score=578.54 Aligned_cols=326 Identities=43% Similarity=0.780 Sum_probs=306.9
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (349)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (349)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|++++..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999997656678999999999999999999999999999999999984459999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc----CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (349)
+|++++++|+|||+.+++..|+..+++.++|++.+.+++.+...+.. .....++.++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 99999999999999998646999999999999999888766554431 22246889999999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred Hh-hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCC
Q 018922 258 AA-TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (349)
Q Consensus 258 ~a-~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~ 336 (349)
++ . ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|||+
T Consensus 277 aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~ 355 (517)
T 2o2p_A 277 CALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355 (517)
T ss_dssp HHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred hHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 98 6 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCC
Q 018922 337 DPAVRQGPQVLI 348 (349)
Q Consensus 337 ~~~~~~Gpl~~~ 348 (349)
++++++|||+++
T Consensus 356 ~~~~~~Gpli~~ 367 (517)
T 2o2p_A 356 ERDTNHGPQNHE 367 (517)
T ss_dssp STTCCBCCCSSH
T ss_pred CCCCccCCCcCH
Confidence 999999999984
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=6.6e-76 Score=577.66 Aligned_cols=325 Identities=38% Similarity=0.674 Sum_probs=309.1
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (349)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (349)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 108 (504)
T 3ek1_A 31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIAN 108 (504)
T ss_dssp CCSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999877788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHH
Q 018922 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (349)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 178 (349)
+++|++++++|+|||+.+++ .|+..+++.++|++.+.++..+...+.. .+...+++++|+|||++|+|||||+...++
T Consensus 109 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 187 (504)
T 3ek1_A 109 ADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITR 187 (504)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHH
Confidence 99999999999999999988 5999999999999999887766554432 245678899999999999999999999999
Q ss_pred HHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (349)
Q Consensus 179 ~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (349)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 188 ~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 267 (504)
T 3ek1_A 188 KAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQC 267 (504)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCC
Q 018922 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (349)
Q Consensus 259 a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~ 338 (349)
+. ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|||+++
T Consensus 268 a~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 346 (504)
T 3ek1_A 268 AP-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEP 346 (504)
T ss_dssp GG-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccc
Confidence 88 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCC
Q 018922 339 AVRQGPQVLI 348 (349)
Q Consensus 339 ~~~~Gpl~~~ 348 (349)
++++|||+++
T Consensus 347 ~~~~Gpli~~ 356 (504)
T 3ek1_A 347 GVVIGPMIEE 356 (504)
T ss_dssp TCCBCCCSSH
T ss_pred cCccccccCH
Confidence 9999999984
No 9
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.6e-75 Score=575.33 Aligned_cols=329 Identities=35% Similarity=0.597 Sum_probs=313.0
Q ss_pred CccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (349)
Q Consensus 16 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (349)
+.++..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.
T Consensus 7 ~~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 84 (497)
T 3k2w_A 7 DLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANK 84 (497)
T ss_dssp CCCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHH
T ss_pred cccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 4456678899999999887778999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHH
Q 018922 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTT 174 (349)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~ 174 (349)
|++++++|++++++|+|||+.+++ .|+..+++.++|++...+++.+...+.. .+...++.++|+|||++|+|||||+.
T Consensus 85 l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 163 (497)
T 3k2w_A 85 IRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLA 163 (497)
T ss_dssp HHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHH
Confidence 999999999999999999999998 6999999999999999888776654432 34567889999999999999999999
Q ss_pred hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (349)
Q Consensus 175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (349)
..++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i 243 (497)
T 3k2w_A 164 LAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQI 243 (497)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (349)
Q Consensus 255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~ 334 (349)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus 244 ~~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~ 322 (497)
T 3k2w_A 244 YKTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGD 322 (497)
T ss_dssp HHHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999987 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCC
Q 018922 335 PFDPAVRQGPQVLI 348 (349)
Q Consensus 335 p~~~~~~~Gpl~~~ 348 (349)
|+++++++|||+++
T Consensus 323 p~~~~~~~gpli~~ 336 (497)
T 3k2w_A 323 PMDADSQMGPKCNQ 336 (497)
T ss_dssp TTSTTCSBCCCSCH
T ss_pred CCCCCCccccCcCH
Confidence 99999999999984
No 10
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=3.5e-75 Score=573.24 Aligned_cols=327 Identities=36% Similarity=0.616 Sum_probs=308.6
Q ss_pred ccccccceeecCeeeeCCCCCe-EEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922 17 PEIKFTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (349)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~-~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (349)
.-+..+++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.
T Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 92 (503)
T 1a4s_A 15 VVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARI 92 (503)
T ss_dssp CCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHH
Confidence 3345567899999998766677 99999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHh
Q 018922 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (349)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (349)
|++++++|++++++|+|||+.++. .|+..+++.++|+++..+++.++..+...+...++.++|+|||++|+|||||+..
T Consensus 93 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 171 (503)
T 1a4s_A 93 IRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMI 171 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHH
Confidence 999999999999999999999987 6999999999999999888766544433334567889999999999999999999
Q ss_pred hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (349)
Q Consensus 176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (349)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ ++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 250 (503)
T 1a4s_A 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVM 250 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8999999999999999999999999999
Q ss_pred HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (349)
Q Consensus 256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p 335 (349)
+.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||
T Consensus 251 ~~aa~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 329 (503)
T 1a4s_A 251 EMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329 (503)
T ss_dssp HHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCC
Confidence 99987 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCC
Q 018922 336 FDPAVRQGPQVLI 348 (349)
Q Consensus 336 ~~~~~~~Gpl~~~ 348 (349)
+++++++|||+++
T Consensus 330 ~~~~~~~gpli~~ 342 (503)
T 1a4s_A 330 LLTETRMGGLISK 342 (503)
T ss_dssp TSTTCCBCCCSCH
T ss_pred cccCCccCCCcCH
Confidence 9999999999984
No 11
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.7e-75 Score=575.30 Aligned_cols=326 Identities=41% Similarity=0.696 Sum_probs=310.9
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhc--ccCCCCCCCHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADL 95 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~~ 95 (349)
+..+++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| . .|+.++..+|.++|+++++.
T Consensus 20 ~~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~ 97 (528)
T 3u4j_A 20 KSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADL 97 (528)
T ss_dssp CCBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHH
Confidence 3466899999999887788999999999 99999999999999999999999999 7 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHH
Q 018922 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTT 174 (349)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~ 174 (349)
|++++++|++++++|+|||+.++. .|+..+++.++|+++.++++.++..+.. .+...++.++|+|||++|+|||||+.
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 176 (528)
T 3u4j_A 98 ILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFI 176 (528)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHH
Confidence 999999999999999999999996 7999999999999999888776655543 34567889999999999999999999
Q ss_pred hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (349)
Q Consensus 175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (349)
..++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 256 (528)
T 3u4j_A 177 IASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256 (528)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (349)
Q Consensus 255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~ 334 (349)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus 257 ~~~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 335 (528)
T 3u4j_A 257 GEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGD 335 (528)
T ss_dssp HHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEEC
T ss_pred HHHHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCC
Confidence 999987 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCC
Q 018922 335 PFDPAVRQGPQVLI 348 (349)
Q Consensus 335 p~~~~~~~Gpl~~~ 348 (349)
|+++++++|||+++
T Consensus 336 p~~~~~~~Gpli~~ 349 (528)
T 3u4j_A 336 PLNERTKIGAMISE 349 (528)
T ss_dssp TTSTTCSBCCCSCH
T ss_pred CCCcCCccCCccCH
Confidence 99999999999974
No 12
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2e-75 Score=576.40 Aligned_cols=334 Identities=30% Similarity=0.432 Sum_probs=308.6
Q ss_pred ccccccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHH
Q 018922 10 CKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIM 89 (349)
Q Consensus 10 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L 89 (349)
.-+.|.+.||..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|
T Consensus 15 ~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L 92 (521)
T 4e4g_A 15 TENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVF 92 (521)
T ss_dssp ---------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHH
T ss_pred chhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHH
Confidence 3567888889999999999999887778999999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcC
Q 018922 90 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIP 168 (349)
Q Consensus 90 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p 168 (349)
+++++.|++++++|++++++|+|||+.+++ .|+..+++.++|++...+.+.+...+. ..+...+++++|+|||++|+|
T Consensus 93 ~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 171 (521)
T 4e4g_A 93 MKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITP 171 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECC
Confidence 999999999999999999999999999998 699999999999998877766654332 234557889999999999999
Q ss_pred CCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCCh
Q 018922 169 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 248 (349)
Q Consensus 169 ~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~ 248 (349)
||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++| +.+.++.|+.||+|+.|+||||+
T Consensus 172 wN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~ 250 (521)
T 4e4g_A 172 FNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGST 250 (521)
T ss_dssp SSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999 45677999999999999999999
Q ss_pred HHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecc-cHHHHHHHHHHHh
Q 018922 249 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKA 327 (349)
Q Consensus 249 ~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-~~~~f~~~l~~~~ 327 (349)
.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|.+++
T Consensus 251 ~vG~~i~~~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~ 329 (521)
T 4e4g_A 251 PIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMV 329 (521)
T ss_dssp HHHHHHHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHH
Confidence 999999999988 89999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hcccccCCCCCCCcccccCCC
Q 018922 328 KAWVVGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 328 ~~l~~g~p~~~~~~~Gpl~~~ 348 (349)
+++++|+|+++++++|||+++
T Consensus 330 ~~~~vG~~~~~~~~~gpli~~ 350 (521)
T 4e4g_A 330 ESLRIGPYTDEKADMGPVVTK 350 (521)
T ss_dssp HTCCBCCTTCTTCSBCCCSCH
T ss_pred HhccCCCCCCccCccCCCCCH
Confidence 999999999999999999974
No 13
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3.6e-75 Score=571.99 Aligned_cols=325 Identities=34% Similarity=0.538 Sum_probs=305.8
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 23 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 100 (497)
T 3i44_A 23 LNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEK 100 (497)
T ss_dssp EEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHH
Confidence 3567899999999887778999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEE-eecceeEEEEcCCCccHHhhH
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~ 177 (349)
++++|++++++|+|||+.+++..|+..+++.++++++........... ..+...+++ ++|+|||++|+|||||+...+
T Consensus 101 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (497)
T 3i44_A 101 RSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQVT 179 (497)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHHH
Confidence 999999999999999999987569999999999999877654332221 113446778 999999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 180 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~ 259 (497)
T 3i44_A 180 LKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKN 259 (497)
T ss_dssp HHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (349)
Q Consensus 258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~ 337 (349)
++. ++||+++|+|||||+||++||| |.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|||+|
T Consensus 260 aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~ 337 (497)
T 3i44_A 260 ASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQ 337 (497)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred Hhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 987 8999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCC
Q 018922 338 PAVRQGPQVLI 348 (349)
Q Consensus 338 ~~~~~Gpl~~~ 348 (349)
+++++|||+++
T Consensus 338 ~~~~~Gpli~~ 348 (497)
T 3i44_A 338 TGNHIGPVVSK 348 (497)
T ss_dssp CSSCBCCCSCH
T ss_pred CCCccCCCcCH
Confidence 99999999974
No 14
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=2.6e-75 Score=573.12 Aligned_cols=325 Identities=35% Similarity=0.588 Sum_probs=308.3
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
|...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|+++++.|++
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 99 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEK 99 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 456789999999987666 899999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (349)
++++|++++++|+|||+.++...|+..+++.++|+++.++++.+...+. ..+...+++++|+|||++|+|||||+...+
T Consensus 100 ~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 100 EADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHH
Confidence 9999999999999999999933799999999999999988876654432 234567889999999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 258 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA 258 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999888899999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (349)
Q Consensus 258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~ 337 (349)
++. ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+|
T Consensus 259 aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d 337 (498)
T 4f3x_A 259 AAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDD 337 (498)
T ss_dssp HHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSG
T ss_pred HHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCC
Q 018922 338 PAVRQGPQVLI 348 (349)
Q Consensus 338 ~~~~~Gpl~~~ 348 (349)
+++++|||+++
T Consensus 338 ~~~~~Gpli~~ 348 (498)
T 4f3x_A 338 TENEIGPLISR 348 (498)
T ss_dssp GGCSSCCCSCH
T ss_pred ccCccccCcCH
Confidence 99999999974
No 15
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.8e-75 Score=570.92 Aligned_cols=330 Identities=41% Similarity=0.706 Sum_probs=314.6
Q ss_pred CccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (349)
Q Consensus 16 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (349)
|+||..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.
T Consensus 1 ~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 78 (490)
T 2ve5_A 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDI 78 (490)
T ss_dssp -CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHH
T ss_pred CCccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 4678888999999999877788999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHh
Q 018922 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (349)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (349)
|++++++|++++++|+|||+.+++..|+..+++.++|+++..+.+.+...+...+...+++++|+|||++|+|||||+..
T Consensus 79 l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~ 158 (490)
T 2ve5_A 79 LRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQI 158 (490)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHH
Confidence 99999999999999999999999844999999999999999888776665554556678899999999999999999999
Q ss_pred hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (349)
Q Consensus 176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (349)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 159 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~ 238 (490)
T 2ve5_A 159 ALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHH-hhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922 256 QAA-ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (349)
Q Consensus 256 ~~~-a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~ 334 (349)
+.+ +. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+
T Consensus 239 ~~a~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 239 ASASSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred Hhchhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 999 76 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCC
Q 018922 335 PFDPAVRQGPQVLI 348 (349)
Q Consensus 335 p~~~~~~~Gpl~~~ 348 (349)
|+|+++++|||+++
T Consensus 318 p~d~~~~~gpli~~ 331 (490)
T 2ve5_A 318 PQDENTNFGPLVSF 331 (490)
T ss_dssp TTSTTCCBCCCSCH
T ss_pred CCCCCCccCCCCCH
Confidence 99999999999974
No 16
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=8.9e-75 Score=570.76 Aligned_cols=328 Identities=44% Similarity=0.712 Sum_probs=308.5
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC---CCCCCCHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADL 95 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~ 95 (349)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 445678999999988778899999999999999999999999999999999999732 69999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCcee-ec---cCCccceEEeecceeEEEEcCCCc
Q 018922 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM---SRALQGYTLREPIGVVGHIIPWNF 171 (349)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~i~p~n~ 171 (349)
|++++++|++++++|+|||+.+++ .|+..+++.++|++.+.+++.+... +. ..+...+++++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 999999999999999999999997 6999999999999998877665431 11 134457889999999999999999
Q ss_pred cHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHH
Q 018922 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (349)
Q Consensus 172 P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (349)
|+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+++|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (349)
Q Consensus 252 ~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~ 331 (349)
+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccccCCC
Q 018922 332 VGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 332 ~g~p~~~~~~~Gpl~~~ 348 (349)
+|||+++++++|||+++
T Consensus 323 ~g~p~~~~~~~gpli~~ 339 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSE 339 (503)
T ss_dssp BSCTTSTTCCBCCCSCH
T ss_pred CCCCCCCCCcccCccCH
Confidence 99999999999999984
No 17
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=7.5e-75 Score=570.10 Aligned_cols=325 Identities=54% Similarity=0.859 Sum_probs=306.5
Q ss_pred ceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHAE 101 (349)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (349)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999987667889999999999999999999999999999999999721 49999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (349)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~ 181 (349)
+|++++++|+|||+.++...|+..+++.++|+++.++++.+...+...+...+++++|+|||++|+|||||+...+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987657999999999999998887766544433344568899999999999999999999999999
Q ss_pred hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh-h
Q 018922 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-T 260 (349)
Q Consensus 182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a-~ 260 (349)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.++ .
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999987889999999999999999999999999999998 6
Q ss_pred CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCC
Q 018922 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (349)
Q Consensus 261 ~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~ 340 (349)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+++++
T Consensus 261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCC
Q 018922 341 RQGPQVLI 348 (349)
Q Consensus 341 ~~Gpl~~~ 348 (349)
++|||+++
T Consensus 340 ~~Gpli~~ 347 (500)
T 1o04_A 340 EQGPQVDE 347 (500)
T ss_dssp SBCCCSSH
T ss_pred ccCcccCH
Confidence 99999984
No 18
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.9e-75 Score=573.86 Aligned_cols=323 Identities=36% Similarity=0.615 Sum_probs=308.6
Q ss_pred cccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 018922 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (349)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (349)
++..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 88 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMR 88 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence 45567899999999877788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhh----hcCceeeccCCccceEEeecceeEEEEcCCCccH
Q 018922 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173 (349)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 173 (349)
+++++|++++++|+|||+.++ |+..+++.++|++...+. +.++..+...+. .+++++|+|||++|+|||||+
T Consensus 89 ~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~ 164 (517)
T 3r31_A 89 ERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQ 164 (517)
T ss_dssp HTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchH
Confidence 999999999999999999987 899999999999999887 666655544444 789999999999999999999
Q ss_pred HhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 018922 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (349)
Q Consensus 174 ~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (349)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|+.||+|+.|+||||+.+|+.
T Consensus 165 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 243 (517)
T 3r31_A 165 QIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRK 243 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 8889999999999999999999999999
Q ss_pred HHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccccc
Q 018922 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (349)
Q Consensus 254 i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g 333 (349)
|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 244 i~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 244 VAAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCC
Q 018922 334 DPFDPAVRQGPQVLI 348 (349)
Q Consensus 334 ~p~~~~~~~Gpl~~~ 348 (349)
||+++++++|||+++
T Consensus 323 ~p~~~~~~~Gpli~~ 337 (517)
T 3r31_A 323 DPLDYATHLGPLVSK 337 (517)
T ss_dssp CTTSTTCSBCCBSCH
T ss_pred CCCCcCCcccCCcCH
Confidence 999999999999974
No 19
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=8.5e-75 Score=569.06 Aligned_cols=331 Identities=37% Similarity=0.607 Sum_probs=306.0
Q ss_pred cccCccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 018922 13 LFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKF 92 (349)
Q Consensus 13 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~ 92 (349)
.++...+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++
T Consensus 15 ~~~~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~ 91 (495)
T 1wnd_A 15 LYKKAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKL 91 (495)
T ss_dssp -------CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHH
T ss_pred ccccccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHH
Confidence 34444445567999999998655 7899999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCc
Q 018922 93 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNF 171 (349)
Q Consensus 93 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~ 171 (349)
++.|++++++|++++++|+|||+.++...|+..+++.++|+++.++++.++..+.. .+...++.++|+|||++|+||||
T Consensus 92 a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 171 (495)
T 1wnd_A 92 ADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNY 171 (495)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcc
Confidence 99999999999999999999999998744999999999999998887766544432 23356788999999999999999
Q ss_pred cHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHH
Q 018922 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (349)
Q Consensus 172 P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (349)
|+...++++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|++||+|+.|+||||+.+|
T Consensus 172 P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 172 PLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999 99999999999878899999999999999999999999
Q ss_pred HHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (349)
Q Consensus 252 ~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~ 331 (349)
+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.+++++++
T Consensus 251 ~~i~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 329 (495)
T 1wnd_A 251 EHIISHTAS-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLK 329 (495)
T ss_dssp HHHHHHHGG-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHh-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhcc
Confidence 999999987 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccccCCC
Q 018922 332 VGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 332 ~g~p~~~~~~~Gpl~~~ 348 (349)
+|||+++++++|||+++
T Consensus 330 ~g~p~~~~~~~Gpli~~ 346 (495)
T 1wnd_A 330 SGAPDDESTELGPLSSL 346 (495)
T ss_dssp BCCTTSTTCCBCCCSCH
T ss_pred CCCCccCCCCccCCCCH
Confidence 99999999999999984
No 20
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-74 Score=571.35 Aligned_cols=323 Identities=43% Similarity=0.688 Sum_probs=307.4
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (349)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (349)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876678899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (349)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 180 (349)
+|++++++|+|||+.+++ .|+..+++.++|+++..++..+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999998 799999999999999888877665443 234456889999999999999999999999999
Q ss_pred HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 018922 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (349)
Q Consensus 181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~ 260 (349)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.++.
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999999988
Q ss_pred CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCC
Q 018922 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (349)
Q Consensus 261 ~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~ 340 (349)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCC
Q 018922 341 RQGPQVLI 348 (349)
Q Consensus 341 ~~Gpl~~~ 348 (349)
++|||+++
T Consensus 343 ~~gpli~~ 350 (515)
T 2d4e_A 343 EVGPLIHP 350 (515)
T ss_dssp SBCCCSCH
T ss_pred ccCCCcCH
Confidence 99999984
No 21
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=2.8e-74 Score=570.28 Aligned_cols=323 Identities=31% Similarity=0.500 Sum_probs=306.5
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
..+++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 111 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRR 111 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHH
Confidence 3568999999997 567899999999 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHh-hhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (349)
++++|++++++|+|||+.+++ .|+..+++.++|+++. .+...++..+...+...++.++|+|||++|+|||||+...+
T Consensus 112 ~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 190 (538)
T 3qan_A 112 RKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMV 190 (538)
T ss_dssp THHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHH
Confidence 999999999999999999998 5999999999999998 55566655543345567889999999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 270 (538)
T 3qan_A 191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270 (538)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCC------CcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922 258 AATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (349)
Q Consensus 258 ~a~~~------~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~ 331 (349)
++. + +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus 271 aa~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 349 (538)
T 3qan_A 271 AAV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT 349 (538)
T ss_dssp HTS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred hhh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence 987 6 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccccCCC
Q 018922 332 VGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 332 ~g~p~~~~~~~Gpl~~~ 348 (349)
+|||+++++++|||+++
T Consensus 350 vG~p~~~~~~~Gpli~~ 366 (538)
T 3qan_A 350 VGDPTNRDNYMGPVIDE 366 (538)
T ss_dssp BSCTTSTTCSBCCCSCH
T ss_pred CCCCCCCCCCCcCccCH
Confidence 99999999999999984
No 22
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=2e-74 Score=566.06 Aligned_cols=326 Identities=39% Similarity=0.675 Sum_probs=309.3
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 7 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 84 (481)
T 3jz4_A 7 LFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMME 84 (481)
T ss_dssp GCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CcccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3455799999999887788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhH
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (349)
++++|++++++|+|||+.+++ .|+..+++.++|++....+..+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus 85 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 163 (481)
T 3jz4_A 85 HQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMIT 163 (481)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHH
Confidence 999999999999999999998 6999999999999998877665554432 34556889999999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 164 ~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~ 243 (481)
T 3jz4_A 164 RKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQ 243 (481)
T ss_dssp HHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC
Q 018922 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (349)
Q Consensus 258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~ 337 (349)
++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus 244 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 322 (481)
T 3jz4_A 244 CAK-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLD 322 (481)
T ss_dssp HTT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTS
T ss_pred Hhh-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCC
Q 018922 338 PAVRQGPQVLI 348 (349)
Q Consensus 338 ~~~~~Gpl~~~ 348 (349)
+++++|||+++
T Consensus 323 ~~~~~gpli~~ 333 (481)
T 3jz4_A 323 NGVTIGPLIDE 333 (481)
T ss_dssp TTCCBCCCSCH
T ss_pred CcCccccccCH
Confidence 99999999974
No 23
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=1.9e-74 Score=565.92 Aligned_cols=325 Identities=33% Similarity=0.576 Sum_probs=307.3
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (349)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (349)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRER 82 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 356789999999876677899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHH
Q 018922 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (349)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 178 (349)
+++|++++++|+|||+.+++ .|+..+++.++|+++..++..+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 161 (479)
T 2imp_A 83 ASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIAR 161 (479)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHH
Confidence 99999999999999999988 6999999999999998877666553332 233568899999999999999999999999
Q ss_pred HHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (349)
Q Consensus 179 ~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (349)
++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|++.+
T Consensus 162 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 241 (479)
T 2imp_A 162 KMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA 241 (479)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999999
Q ss_pred hhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCC-
Q 018922 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD- 337 (349)
Q Consensus 259 a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~- 337 (349)
+. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus 242 a~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 320 (479)
T 2imp_A 242 AK-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 320 (479)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTC
T ss_pred hc-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcccc
Confidence 87 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCC
Q 018922 338 PAVRQGPQVLI 348 (349)
Q Consensus 338 ~~~~~Gpl~~~ 348 (349)
+++++|||+++
T Consensus 321 ~~~~~gpli~~ 331 (479)
T 2imp_A 321 NDIAMGPLINA 331 (479)
T ss_dssp SSCSBCCCSSH
T ss_pred CCCccCCCcCH
Confidence 99999999984
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=4.1e-74 Score=565.50 Aligned_cols=321 Identities=32% Similarity=0.523 Sum_probs=304.9
Q ss_pred ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (349)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (349)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccC------CccceEEeecceeEEEEcCCCccHH
Q 018922 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR------ALQGYTLREPIGVVGHIIPWNFPTT 174 (349)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~P~GVv~~i~p~n~P~~ 174 (349)
++|++++++|+|||+.+++ .|+..+++.++|+++..+++.++..+... +...+++++|+|||++|+|||||+.
T Consensus 89 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 9999999999999999998 59999999999999998887765544321 3456888999999999999999999
Q ss_pred hhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (349)
Q Consensus 175 ~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (349)
..++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (349)
Q Consensus 255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~ 334 (349)
++.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 99875 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCC
Q 018922 335 PFDPAVRQGPQVLI 348 (349)
Q Consensus 335 p~~~~~~~Gpl~~~ 348 (349)
|+ +++++|||+++
T Consensus 325 p~-~~~~~gpli~~ 337 (505)
T 3prl_A 325 PE-DDADITPVIDE 337 (505)
T ss_dssp TT-TTCSBCCCSCH
T ss_pred CC-CcCcCCcccCH
Confidence 99 99999999974
No 25
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=5.9e-74 Score=562.62 Aligned_cols=326 Identities=35% Similarity=0.535 Sum_probs=307.3
Q ss_pred CccccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (349)
Q Consensus 16 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (349)
|.|+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.
T Consensus 2 ~~m~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 79 (478)
T 3ty7_A 2 NAMRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKE 79 (478)
T ss_dssp -CCEECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHH
T ss_pred cchhhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 4456678999999999987788999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHh
Q 018922 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (349)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (349)
|++++++|++++++|+|||+.++...|+..+++.++|+++...+..+... ....+++++|+|||++|+|||||+..
T Consensus 80 l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~ 155 (478)
T 3ty7_A 80 YENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQ 155 (478)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHH
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHH
Confidence 99999999999999999999999447999999999999998877665432 23467889999999999999999999
Q ss_pred hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (349)
Q Consensus 176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (349)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 156 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~ 235 (478)
T 3ty7_A 156 TSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM 235 (478)
T ss_dssp HHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred HHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (349)
Q Consensus 256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p 335 (349)
+.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 236 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 314 (478)
T 3ty7_A 236 EKAAK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNP 314 (478)
T ss_dssp CSTTT-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHh-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99887 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCC
Q 018922 336 FDPAVRQGPQVLI 348 (349)
Q Consensus 336 ~~~~~~~Gpl~~~ 348 (349)
+++++++|||+++
T Consensus 315 ~~~~~~~gpli~~ 327 (478)
T 3ty7_A 315 REDGTQVGPIISK 327 (478)
T ss_dssp TSTTCCBCCCSCH
T ss_pred CCCCCccCCCcCH
Confidence 9999999999974
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=8.9e-74 Score=561.56 Aligned_cols=321 Identities=37% Similarity=0.633 Sum_probs=304.4
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (349)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (349)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999764 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhHHHH
Q 018922 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (349)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~ 180 (349)
+|++++++|+|||+.+++ .|+..+++.++|+++..++..++..+. ..+...+++++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 999999999999999998 599999999999999888776665443 233456889999999999999999999999999
Q ss_pred HhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~---g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |.+.++++.|++||+|+.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8677889999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhc-ccccCCC
Q 018922 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPF 336 (349)
Q Consensus 258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~-l~~g~p~ 336 (349)
++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++ +++|||+
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 987 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCcccccCCC
Q 018922 337 DPAVRQGPQVLI 348 (349)
Q Consensus 337 ~~~~~~Gpl~~~ 348 (349)
++++++|||+++
T Consensus 327 ~~~~~~gpli~~ 338 (487)
T 2w8n_A 327 EEGTTQGPLINE 338 (487)
T ss_dssp STTCCBCCCSSH
T ss_pred cccCcccCCCCH
Confidence 999999999984
No 27
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.4e-73 Score=560.85 Aligned_cols=326 Identities=28% Similarity=0.457 Sum_probs=305.7
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 81 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHE 81 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 4566899999999877788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc--CCccceEEeecceeEEEEcCCCccHHhh
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMF 176 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 176 (349)
++++|++++++|+|||+.+++ .|+..+++.++|+++..+.+.+...+.. .+...+++++|+|||++|+|||||+...
T Consensus 82 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 160 (485)
T 4dng_A 82 NRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLS 160 (485)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHH
Confidence 999999999999999999998 4999999999999999887766654432 2356788999999999999999999999
Q ss_pred HHHHHhHHhcCCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922 177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (349)
Q Consensus 177 ~~~~~~AL~aGN~vvlkps~~~~~t~-~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (349)
++++++||++||+||+|||+.+|+++ ..|+++|.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|+
T Consensus 161 ~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~ 240 (485)
T 4dng_A 161 MRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIG 240 (485)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999998778999999999999999999999999999
Q ss_pred HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (349)
Q Consensus 256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p 335 (349)
+.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 241 ~~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 241 EIAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99987 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCC
Q 018922 336 FDPAVRQGPQVLI 348 (349)
Q Consensus 336 ~~~~~~~Gpl~~~ 348 (349)
+|+++++|||+++
T Consensus 320 ~~~~~~~gpli~~ 332 (485)
T 4dng_A 320 TDPKTVVGPLINE 332 (485)
T ss_dssp TSTTCSBCCCSSH
T ss_pred CcCCCccCCCCCH
Confidence 9999999999974
No 28
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3.5e-73 Score=557.53 Aligned_cols=324 Identities=32% Similarity=0.512 Sum_probs=304.6
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
|..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++
T Consensus 3 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 80 (486)
T 1t90_A 3 IRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQ 80 (486)
T ss_dssp CCBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHT
T ss_pred CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHH
Confidence 4456789999999876677899999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee-ccCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (349)
++++|++++++|+|||+.+++ .|+..+++.++|++...+.+.++..+ ...+...+++++|+|||++|+|||||+...+
T Consensus 81 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 159 (486)
T 1t90_A 81 HKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPC 159 (486)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHH
Confidence 999999999999999999987 69999999999998776666655433 2233456788999999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++| +.++++.|++||+|+.|+||||+.+|+.|++.
T Consensus 160 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~ 238 (486)
T 1t90_A 160 WMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKK 238 (486)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 56789999999999999999999999999999
Q ss_pred HhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCce-EEEecccHHHHHHHHHHHhhcccccCCC
Q 018922 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (349)
Q Consensus 258 ~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~~~~~f~~~l~~~~~~l~~g~p~ 336 (349)
++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|.++++++++|+|+
T Consensus 239 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~ 316 (486)
T 1t90_A 239 GSE-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL 316 (486)
T ss_dssp HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred Hhc-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence 988 89999999999999999999999999999999999999999999999 999999 999999999999999999999
Q ss_pred CCCCcccccCCC
Q 018922 337 DPAVRQGPQVLI 348 (349)
Q Consensus 337 ~~~~~~Gpl~~~ 348 (349)
++++++|||+++
T Consensus 317 ~~~~~~gpli~~ 328 (486)
T 1t90_A 317 DDGVFLGPVIRE 328 (486)
T ss_dssp STTCCBCCCSCH
T ss_pred ccCCccCCCCCH
Confidence 999999999984
No 29
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=3e-73 Score=561.47 Aligned_cols=321 Identities=29% Similarity=0.489 Sum_probs=302.4
Q ss_pred ccceeecCeeeeCCCCCeEEeecCC-CCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922 21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (349)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~~P~-~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (349)
.+++||||+|+.+ +++++++||+ ||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 4578999999963 5689999999 6999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee--ccCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (349)
+++|++++++|+|||+.+++ .|+..+++.++||++.++++.+...+ ...+...++.++|+|||++|+|||||+...+
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 113 KRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 99999999999999999998 69999999999999988877765422 1123456788999999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|++||+|+.|+||||+.+|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999878899999999999999999999999999999
Q ss_pred Hh------hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccc
Q 018922 258 AA------TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (349)
Q Consensus 258 ~a------~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~ 331 (349)
++ . ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++
T Consensus 272 aa~~~~~~~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 350 (516)
T 1uzb_A 272 AGRLAPGQT-WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350 (516)
T ss_dssp HTSCCTTCC-SCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCC
T ss_pred hhhcccccc-ccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhcc
Confidence 87 4 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccccCCC
Q 018922 332 VGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 332 ~g~p~~~~~~~Gpl~~~ 348 (349)
+||| ++++++|||+++
T Consensus 351 ~G~p-~~~~~~Gpli~~ 366 (516)
T 1uzb_A 351 VGPA-EENPDLGPVVSA 366 (516)
T ss_dssp BSCG-GGCCSBCCCSCH
T ss_pred CCCC-ccccccCCCCCH
Confidence 9999 999999999984
No 30
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=3.7e-73 Score=556.25 Aligned_cols=320 Identities=30% Similarity=0.483 Sum_probs=301.3
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (349)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (349)
+.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 3 ~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 78 (475)
T 1euh_A 3 KQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 78 (475)
T ss_dssp CBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 4568999999997644 899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CC----ccc-eEEeecceeEEEEcCCCccH
Q 018922 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPT 173 (349)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~ 173 (349)
+++|++++++|+|||+.+++ .|+..+++.++|+++..+++.++..+.. .+ ... ++.++|+|||++|+|||||+
T Consensus 79 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 157 (475)
T 1euh_A 79 KEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157 (475)
T ss_dssp HHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchH
Confidence 99999999999999999987 6999999999999998877666544432 22 344 88999999999999999999
Q ss_pred HhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 018922 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (349)
Q Consensus 174 ~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (349)
...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.++++.|+.||+++.|+||||+.+|+.
T Consensus 158 ~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 237 (475)
T 1euh_A 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237 (475)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence 99999999999999999999999999999999999999999999999999977778999999999999999999999999
Q ss_pred HHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhccccc
Q 018922 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (349)
Q Consensus 254 i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g 333 (349)
|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 238 i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (475)
T 1euh_A 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 314 (475)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred HHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999875 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCC
Q 018922 334 DPFDPAVRQGPQVLI 348 (349)
Q Consensus 334 ~p~~~~~~~Gpl~~~ 348 (349)
||++ ++++|||+++
T Consensus 315 ~p~~-~~~~gpli~~ 328 (475)
T 1euh_A 315 NPED-DADITPLIDT 328 (475)
T ss_dssp CGGG-TCSBCCCSCH
T ss_pred Cccc-cCccCCCCCH
Confidence 9999 9999999984
No 31
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=4.2e-73 Score=555.87 Aligned_cols=315 Identities=31% Similarity=0.550 Sum_probs=293.7
Q ss_pred eeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 018922 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (349)
Q Consensus 24 ~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (349)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999975 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhH
Q 018922 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (349)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A 183 (349)
++++++|+|||+.+++ .|+..+++.++|++...+++.++..+.. +...+++++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999998 6999999999999999888766554433 4567889999999999999999999999999999
Q ss_pred HhcCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHh
Q 018922 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (349)
Q Consensus 184 L~aGN~vvlkps~~~~~t~~~l~~~l~~a----glP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a 259 (349)
|++||+||+|||+.+|+++..+++++.++ |+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999998875
Q ss_pred hCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCC
Q 018922 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (349)
Q Consensus 260 ~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~ 339 (349)
+||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCC
Q 018922 340 VRQGPQVLI 348 (349)
Q Consensus 340 ~~~Gpl~~~ 348 (349)
+++|||+++
T Consensus 312 ~~~gpli~~ 320 (486)
T 3pqa_A 312 TDVGPLISV 320 (486)
T ss_dssp CSBCCCSCH
T ss_pred CCcCCCCCH
Confidence 999999974
No 32
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=7e-73 Score=557.88 Aligned_cols=326 Identities=36% Similarity=0.556 Sum_probs=307.6
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEE 87 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 4556899999999877788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc--CCccceEEeecceeEEEEcCCCccHHhh
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHIIPWNFPTTMF 176 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 176 (349)
++++|++++++|+|||..+++ .|+..+++.++|++...+...+ ..+.. .+...+++++|+|||++|+|||||+...
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (508)
T 3r64_A 88 HREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLS 165 (508)
T ss_dssp THHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 999999999999999999998 5999999999999998877665 44432 2356788999999999999999999999
Q ss_pred HHHHHhHHhcCCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922 177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (349)
Q Consensus 177 ~~~~~~AL~aGN~vvlkps~~~~~t~-~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (349)
++++++||++||+||+|||+.+|+++ ..|++++.++|+|+|++|+++|++.++++.|++||+|+.|+||||+.+|+.|+
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 166 IRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhC-CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922 256 QAAATS-NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (349)
Q Consensus 256 ~~~a~~-~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~ 334 (349)
+.++.. ++||+++|+|||||+||++|||+|.|++.++.++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus 246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 325 (508)
T 3r64_A 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD 325 (508)
T ss_dssp HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 888742 5799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCC
Q 018922 335 PFDPAVRQGPQVLI 348 (349)
Q Consensus 335 p~~~~~~~Gpl~~~ 348 (349)
|+++++++|||+++
T Consensus 326 p~~~~~~~gpli~~ 339 (508)
T 3r64_A 326 PSAEGTLVGPVIND 339 (508)
T ss_dssp TTSSSCCBCCCSCH
T ss_pred CccCCCcccCCCCH
Confidence 99999999999974
No 33
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.1e-72 Score=555.49 Aligned_cols=322 Identities=28% Similarity=0.453 Sum_probs=302.0
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (349)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (349)
.+++.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 4678999999994 567899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc-CCccceEEeecceeEEEEcCCCccHHhhHH
Q 018922 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (349)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 178 (349)
+++|++++++|+|||+.++. .|+..+++.++|+++..+++.++..+.. .+...+++++|+|||++|+|||||+...++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 99999999999999999986 6999999999999998877666544322 233457789999999999999999999999
Q ss_pred HHHhHHhcCCeEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHH
Q 018922 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (349)
Q Consensus 179 ~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~----~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (349)
++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||+|+.|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999888765 56999999999999 78899999999999999999999999999
Q ss_pred HHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccC
Q 018922 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (349)
Q Consensus 255 ~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~ 334 (349)
++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++||
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999988 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCC
Q 018922 335 PFDPAVRQGPQVLI 348 (349)
Q Consensus 335 p~~~~~~~Gpl~~~ 348 (349)
|+++++++|||+++
T Consensus 335 p~~~~~~~gpli~~ 348 (500)
T 2j6l_A 335 PWDPNVLYGPLHTK 348 (500)
T ss_dssp TTSTTCCBCCCSCH
T ss_pred cccCCCccccCCCH
Confidence 99999999999984
No 34
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=9.1e-73 Score=555.81 Aligned_cols=320 Identities=29% Similarity=0.443 Sum_probs=301.5
Q ss_pred ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018922 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (349)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (349)
.+++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+. .|+.++..+|.++|+++++.|++++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45789999999763 78999999999999999999999999999999999971 3999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeecc---C--CccceEEeecceeEEEEcCCCccHHh
Q 018922 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---R--ALQGYTLREPIGVVGHIIPWNFPTTM 175 (349)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (349)
++|++++++|+|||+.+++ .|+..+++.++|+++..+++.++..+.. . ....+++++|+|||++|+|||||+..
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999998 6999999999999998888766654432 2 23568899999999999999999999
Q ss_pred hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (349)
Q Consensus 176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (349)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999976 8899999999999999999999999999
Q ss_pred HHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCC
Q 018922 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (349)
Q Consensus 256 ~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p 335 (349)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|||
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9875 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCC
Q 018922 336 FDPAVRQGPQVLI 348 (349)
Q Consensus 336 ~~~~~~~Gpl~~~ 348 (349)
+++++++|||+++
T Consensus 330 ~~~~~~~Gpli~~ 342 (501)
T 1uxt_A 330 RDPTVDVGPLISP 342 (501)
T ss_dssp TSTTCSBCCCSCH
T ss_pred cccCCcccCCCCH
Confidence 9999999999984
No 35
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.9e-72 Score=549.97 Aligned_cols=321 Identities=28% Similarity=0.426 Sum_probs=302.3
Q ss_pred cceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018922 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (349)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (349)
.++||||+|+.+. +..+.++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++++
T Consensus 6 ~~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 82 (490)
T 3ju8_A 6 STHYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRAD 82 (490)
T ss_dssp CCEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999763 46789999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHH
Q 018922 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVS 181 (349)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~ 181 (349)
+|++++++|+|||+.+++ .|+..+++.++|++...+...+...+...+...+++++|+|||++|+|||||+...+++++
T Consensus 83 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (490)
T 3ju8_A 83 ELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIV 161 (490)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHH
Confidence 999999999999999998 6999999999999988877766654322334456779999999999999999999999999
Q ss_pred hHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922 182 PALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (349)
Q Consensus 182 ~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 261 (349)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.++++.|+.||+|+.|+||||+.+|+.|++.++.
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~- 239 (490)
T 3ju8_A 162 PALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG- 239 (490)
T ss_dssp HHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-
T ss_pred HHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-
Confidence 9999999999999999999999999999999999999999999 67899999999999999999999999999999887
Q ss_pred CCcce-EEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEeccc-HHHHHHHHHHHhhcccccC-CCCC
Q 018922 262 NLKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDP 338 (349)
Q Consensus 262 ~~~~~-~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~-~~~f~~~l~~~~~~l~~g~-p~~~ 338 (349)
+++|+ ++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|.++++++++|+ |+++
T Consensus 240 ~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~ 319 (490)
T 3ju8_A 240 QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQP 319 (490)
T ss_dssp CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSS
T ss_pred cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCC
Confidence 88998 7999999999999999999999999999999999999999999999996 9999999999999999999 9999
Q ss_pred CCcccccCCC
Q 018922 339 AVRQGPQVLI 348 (349)
Q Consensus 339 ~~~~Gpl~~~ 348 (349)
++++|||+++
T Consensus 320 ~~~~Gpli~~ 329 (490)
T 3ju8_A 320 APFMGAVISL 329 (490)
T ss_dssp CCSBCCCSCH
T ss_pred cCccccccCH
Confidence 9999999974
No 36
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=6.3e-72 Score=547.28 Aligned_cols=306 Identities=27% Similarity=0.421 Sum_probs=293.8
Q ss_pred eEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhh
Q 018922 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (349)
Q Consensus 38 ~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (349)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 488999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCC
Q 018922 118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (349)
Q Consensus 118 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~ 197 (349)
++ .|+..+++.++|+++.++++.+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 98 69999999999999998887776555444556789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCcee
Q 018922 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (349)
Q Consensus 198 ~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~i 277 (349)
+|+++..|++++.++|+|+|++|+|+|++.++++ |+.||+|+.|+||||+.+|+.|++.+++ ++||+++|+|||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999998778888 9999999999999999999999999998 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 278 V~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~ 348 (349)
|++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+++++++|||+++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~ 310 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSE 310 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999974
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.4e-71 Score=552.12 Aligned_cols=324 Identities=24% Similarity=0.322 Sum_probs=300.5
Q ss_pred ccccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 018922 19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (349)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (349)
...+++||||+|+.+. ..+.++||+| ++++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++++|+
T Consensus 61 ~~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~ 136 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLS 136 (563)
T ss_dssp CEECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 3567899999999753 3678899998 799999999999999999999999999 8999999999999999999999
Q ss_pred Hh-HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceee-ccCCccceEEeecceeEEEEcCCCccHHh
Q 018922 98 EH-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (349)
Q Consensus 98 ~~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 175 (349)
++ +++|++++++|+|||+.++...++..+++.++|++..+.++.+.... .......+.++.|+|||++|+|||||+..
T Consensus 137 ~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~ 216 (563)
T 4e3x_A 137 GPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIG 216 (563)
T ss_dssp TTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHH
T ss_pred hccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHH
Confidence 98 99999999999999999998545999999999999998887664322 12233456677888999999999999999
Q ss_pred hHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHH
Q 018922 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (349)
Q Consensus 176 ~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (349)
..++++||| +||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 217 ~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~ 295 (563)
T 4e3x_A 217 GNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLW 295 (563)
T ss_dssp HHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 999999999 5999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCc------ceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhc
Q 018922 256 QAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 329 (349)
Q Consensus 256 ~~~a~~~~~------~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~ 329 (349)
+.++. ++| |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++
T Consensus 296 ~~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~ 374 (563)
T 4e3x_A 296 RQVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSR 374 (563)
T ss_dssp HHHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHT
T ss_pred HHHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHh
Confidence 99998 777 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC-CCCCCcccccCCC
Q 018922 330 WVVGDP-FDPAVRQGPQVLI 348 (349)
Q Consensus 330 l~~g~p-~~~~~~~Gpl~~~ 348 (349)
+++||| +|+++++||||++
T Consensus 375 l~vGdp~~d~~~~~Gpli~~ 394 (563)
T 4e3x_A 375 IKVGDPAEDFGTFFSAVIDA 394 (563)
T ss_dssp CCBSCTTTCTTCSBCCCSCH
T ss_pred ccCCCcccCcCCccCCCcCH
Confidence 999999 9999999999984
No 38
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=3.4e-70 Score=570.14 Aligned_cols=324 Identities=32% Similarity=0.487 Sum_probs=305.8
Q ss_pred cccceeecCeeeeCCCCCeEEeecCCC-CceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018922 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (349)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~~~~P~~-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (349)
..+++||||+|+. ++++++++||+| ++++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|++++++|++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~ 605 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK 605 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3567899999997 357899999998 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCceeec-cCCccceEEeecceeEEEEcCCCccHHhhH
Q 018922 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (349)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 177 (349)
++++|++++++|+|||+.++. .|+..+++.++||+..++++.+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 606 ~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 606 RLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp THHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 999999999999999999998 699999999999999988876554332 234556788999999999999999999999
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHH
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (349)
+++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+++|+.|++.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred Hhh-----CCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (349)
Q Consensus 258 ~a~-----~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~ 332 (349)
++. .++||+++|+|||||+||++|||+|.|++.++.|+|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 873 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccccCCC
Q 018922 333 GDPFDPAVRQGPQVLI 348 (349)
Q Consensus 333 g~p~~~~~~~Gpl~~~ 348 (349)
|+|+++++++||||++
T Consensus 845 G~p~d~~t~~Gpvi~~ 860 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADD 860 (1026)
T ss_dssp CCTTSTTCSBCCCSSH
T ss_pred CCcccccCccccccCH
Confidence 9999999999999984
No 39
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.6e-69 Score=529.36 Aligned_cols=308 Identities=27% Similarity=0.431 Sum_probs=292.2
Q ss_pred CCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch
Q 018922 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH 115 (349)
Q Consensus 36 ~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 115 (349)
..+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+
T Consensus 6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 83 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPI 83 (462)
T ss_dssp CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 45689999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred hhhhhCcHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecC
Q 018922 116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195 (349)
Q Consensus 116 ~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps 195 (349)
.+++ .|+..+++.++|+++..+...+.......+...+++++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 84 ~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps 162 (462)
T 3etf_A 84 KQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHA 162 (462)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECC
Confidence 9998 699999999999999887776654222234556889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCc
Q 018922 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275 (349)
Q Consensus 196 ~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~ 275 (349)
+.+|.++..++++|.++|+|+|++|+++| +.+.+..|+.||+++.|+||||+.+|+.|++.++. ++||+++|+|||||
T Consensus 163 ~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~p 240 (462)
T 3etf_A 163 PNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDP 240 (462)
T ss_dssp TTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCEE
T ss_pred CCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCCc
Confidence 99999999999999999999999999999 56788999999999999999999999999999998 89999999999999
Q ss_pred eeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922 276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 276 ~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~ 348 (349)
+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++|||+++
T Consensus 241 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~ 313 (462)
T 3etf_A 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARF 313 (462)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCH
T ss_pred cEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=7.6e-70 Score=539.63 Aligned_cols=319 Identities=24% Similarity=0.343 Sum_probs=290.1
Q ss_pred ccceeecCeeeeCCCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 018922 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEH 99 (349)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (349)
.+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.++..+|.++|+++++.|+++
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK 82 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence 468999999997644 479999999999999999998 9999999999999 58 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhhcCce-------eecc--CCccceEEeecc-eeEEEEcCC
Q 018922 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-------LKMS--RALQGYTLREPI-GVVGHIIPW 169 (349)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~P~-GVv~~i~p~ 169 (349)
+++|++++++|+|||+.++. .|+..+++.++||+...+++.+.. .+.. .....++.++|+ |||++|+||
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 161 (534)
T 2y53_A 83 RGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161 (534)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence 99999999999999999987 599999999999998876664321 1211 111346789997 999999999
Q ss_pred CccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcC-CCCCEEEEeCC
Q 018922 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGS 247 (349)
Q Consensus 170 n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~ag-lP~gvv~~v~g~~~~~~~~l~~~-~~v~~v~ftGs 247 (349)
|||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+ +..+ ++++.|+||||
T Consensus 162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS 237 (534)
T 2y53_A 162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGS 237 (534)
T ss_dssp TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESC
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECC
Confidence 99999999999999999999999999999999999999999999 899999999996543 3333 67999999999
Q ss_pred hHHHHHHHHHHh-hCCCcceEEeCCCCCceeEcCCC-----CHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHH
Q 018922 248 TDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (349)
Q Consensus 248 ~~~g~~i~~~~a-~~~~~~~~le~gG~~~~iV~~da-----d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~ 321 (349)
+.+|+.|++.++ ..++||+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 238 ~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 317 (534)
T 2y53_A 238 ADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 317 (534)
T ss_dssp HHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHH
Confidence 999999998874 23899999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccCCCCCCCcccccCCC
Q 018922 322 KLVEKAKAWVVGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 322 ~l~~~~~~l~~g~p~~~~~~~Gpl~~~ 348 (349)
+|.++++++++|||+++++++|||+++
T Consensus 318 ~l~~~~~~~~vG~p~~~~~~~Gpli~~ 344 (534)
T 2y53_A 318 ALKAKLAKITVGNPRNDAVRMGSLVSR 344 (534)
T ss_dssp HHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred HHHHHHHhccCCCCCcCCCCccCCCCH
Confidence 999999999999999999999999985
No 41
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4.4e-68 Score=520.19 Aligned_cols=307 Identities=29% Similarity=0.432 Sum_probs=285.2
Q ss_pred CCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 018922 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (349)
Q Consensus 34 ~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 113 (349)
...++++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3557899999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred chhhhhhCcHHHHHHHHHHHHHhhhhhcCceee-cc-CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEE
Q 018922 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (349)
Q Consensus 114 ~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vv 191 (349)
+... . .|+...++.+++++....++...... .. ........++|+|||++|+|||||+...++++++||++||+||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8654 4 59999999999999887665443322 11 2344567789999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCC
Q 018922 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (349)
Q Consensus 192 lkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~g 271 (349)
+|||+.+|.++..+.+++.++|+|+|++|+++| +.+.+..|+.| ++.|+||||+.+|+.|++.++. ++||+++|+|
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 67788899876 8999999999999999999998 8999999999
Q ss_pred CCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 272 G~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~ 348 (349)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|.++++++++|+|+++++++|||+++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~ 311 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAE 311 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999974
No 42
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.6e-67 Score=520.80 Aligned_cols=316 Identities=25% Similarity=0.308 Sum_probs=286.7
Q ss_pred ccccccceeecCeeeeCCCCCeEEeecCCCCceeE-EEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 018922 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (349)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~~~~~~P~~g~~i~-~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (349)
.++...++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.
T Consensus 25 ~~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~ 97 (528)
T 3v4c_A 25 IFTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADE 97 (528)
T ss_dssp SCCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHH
T ss_pred hcccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHH
Confidence 3456678999999997532 99999999998 9999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHhhhhh--cCceee----cc---CCccceEEeecceeEEEE
Q 018922 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----MS---RALQGYTLREPIGVVGHI 166 (349)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~~---~~~~~~~~~~P~GVv~~i 166 (349)
|++++++|++++++|+|||+.+++ .|+..+++.++|+++..++. .....+ .. .+...+++++|+|||++|
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 176 (528)
T 3v4c_A 98 IEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVF 176 (528)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEE
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEE
Confidence 999999999999999999999988 69999999999999988762 222211 00 123457889999999999
Q ss_pred cCCCccHHhhH--HHHHhHHhcCCeEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCCC
Q 018922 167 IPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDID 240 (349)
Q Consensus 167 ~p~n~P~~~~~--~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l----~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~ 240 (349)
+|||||+...+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.++++.|+.||+|+
T Consensus 177 ~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~ 256 (528)
T 3v4c_A 177 GASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIK 256 (528)
T ss_dssp CCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCC
T ss_pred CCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCC
Confidence 99999999865 89999999999999999999999999998865 5789999999999998888999999999999
Q ss_pred EEEEeCChHHHHHHHHHHhhCCC--cceEEeCCCCCceeEcCCC---CHHHHHHHHHHHHhhhcCCCcccCceEEEecc-
Q 018922 241 KVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG- 314 (349)
Q Consensus 241 ~v~ftGs~~~g~~i~~~~a~~~~--~~~~le~gG~~~~iV~~da---d~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~- 314 (349)
.|+||||+.+|+.|++.++. ++ ||+++|+|||||+||++|| |++.|++.++.++|.|+||.|++++|||||++
T Consensus 257 ~V~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~ 335 (528)
T 3v4c_A 257 AVGFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGA 335 (528)
T ss_dssp EEEEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSH
T ss_pred EEEEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEeccc
Confidence 99999999999999999988 78 9999999999999999999 88999999999999999999999999999997
Q ss_pred cHHHHHHHHHHHhhcccccCCCCCCCcccccCC
Q 018922 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVL 347 (349)
Q Consensus 315 ~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~ 347 (349)
+||+|+++|.+++++++.| +.+||+++
T Consensus 336 i~d~f~~~l~~~~~~~~~~------~~~gp~~~ 362 (528)
T 3v4c_A 336 DADRFTTAAVEALAKVAPQ------TMLTDGIA 362 (528)
T ss_dssp HHHHHHHHHHHHHHTCCCE------ECSCHHHH
T ss_pred HHHHHHHHHHHHHHhcccC------CCCCHHHH
Confidence 9999999999999998765 46788764
No 43
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.4e-65 Score=500.32 Aligned_cols=301 Identities=25% Similarity=0.384 Sum_probs=266.0
Q ss_pred CeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 018922 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (349)
Q Consensus 37 ~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (349)
..++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4578999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred hhhhCcHHHHHHHHHHHHHhhhhhcCce-eec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEE
Q 018922 117 WAKMGDIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192 (349)
Q Consensus 117 ~a~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvl 192 (349)
+++..|+..+++.++|+++..+.+.... .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9875599999999999998887665432 211 123456889999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCC
Q 018922 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272 (349)
Q Consensus 193 kps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG 272 (349)
|||+.+|+++..+++++.++ +|+|++|+++| +.+.++.|++ ++|+.|+||||+.+|+.|++.+++ ++||+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999999 99999999999 7788999998 799999999999999999999988 89999999999
Q ss_pred CCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 273 ~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~ 348 (349)
|||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++++ |+++ ++|||+++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~ 310 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTE 310 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999988 7776 99999974
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.8e-64 Score=498.43 Aligned_cols=297 Identities=23% Similarity=0.315 Sum_probs=272.0
Q ss_pred CCCCCeEEeecCCCCcee-EEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 018922 33 SVSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA 111 (349)
Q Consensus 33 ~~~~~~~~~~~P~~g~~i-~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 111 (349)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 345678999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCchhhhhhCcHHHHHHHHHHHHHhhhh--hcCceee----c--cCC-ccceEEeecceeEEEEcCCCccHHhh--HHHH
Q 018922 112 GKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLK----M--SRA-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKV 180 (349)
Q Consensus 112 Gk~~~~a~~~ev~~~~~~l~~~~~~~~~--~~~~~~~----~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~~ 180 (349)
|||+.++. .|+..+++.++|+++.+++ ..+.... . ... ...+++++|+|||++|+|||||+... .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99999886 6999999999999988875 3332221 1 111 13478899999999999999999985 4999
Q ss_pred HhHHhcCCeEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHH
Q 018922 181 SPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (349)
Q Consensus 181 ~~AL~aGN~vvlkps~~~~~t~~~l~~~l----~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (349)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+.++++.|+.||+|+.|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999987 56899999999999977889999999999999999999999999999
Q ss_pred HHhhCCC--cceEEeCCCCCceeEcCCCCHH--HHHHHHHHHHhhhcCCCcccCceEEEecc-cHHHHHHHHHHHhhccc
Q 018922 257 AAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWV 331 (349)
Q Consensus 257 ~~a~~~~--~~~~le~gG~~~~iV~~dad~~--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-~~~~f~~~l~~~~~~l~ 331 (349)
.++. ++ ||+++|+|||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ ++|+|+++|.+++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9987 64 9999999999999999999999 99999999999999999999999999999 99999999999999998
Q ss_pred cc
Q 018922 332 VG 333 (349)
Q Consensus 332 ~g 333 (349)
+|
T Consensus 319 ~g 320 (510)
T 1ez0_A 319 PS 320 (510)
T ss_dssp CB
T ss_pred CC
Confidence 75
No 45
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=2.6e-63 Score=517.33 Aligned_cols=292 Identities=32% Similarity=0.462 Sum_probs=277.2
Q ss_pred EcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHH
Q 018922 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (349)
Q Consensus 53 ~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 132 (349)
++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHH
Confidence 789999999999999999999 89999999999999999999999999999999999999999997 699999999999
Q ss_pred HHHhhhhhcCcee--eccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH
Q 018922 133 YAGAADKIHGEVL--KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (349)
Q Consensus 133 ~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~ 210 (349)
|+...+...+... +...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 9999887765432 22335567889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC--CCcceEEeCCCCCceeEcCCCCHHHHH
Q 018922 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA 288 (349)
Q Consensus 211 ~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~--~~~~~~le~gG~~~~iV~~dad~~~a~ 288 (349)
++|+|+|++|+|+|++.+ +..|+.||+|+.|+||||+++|+.|++.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999997777 99999999999999999999999999998863 489999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 289 ~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~ 348 (349)
+.++.++|.|+||.|+++++||||++++|+|+++|.++++++++|+|+++++++||||++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~ 839 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDV 839 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCH
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999974
No 46
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=7.2e-63 Score=481.81 Aligned_cols=287 Identities=26% Similarity=0.345 Sum_probs=260.7
Q ss_pred CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHH
Q 018922 55 EGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA 134 (349)
Q Consensus 55 ~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 134 (349)
..+.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++.+++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456799999999999999 89999999999999999999999999999999999999999987679999999999888
Q ss_pred HhhhhhcCcee----eccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH
Q 018922 135 GAADKIHGEVL----KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (349)
Q Consensus 135 ~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~ 210 (349)
+.......... ........+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 76654432211 11123456889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHH
Q 018922 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADM 290 (349)
Q Consensus 211 ~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~ 290 (349)
++ +|+|++|+++|. .+....|+.| +++.|+||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.
T Consensus 172 ~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 172 QY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp HH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred Hh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 98 999999999994 4556678887 89999999999999999999987 89999999999999999999999999999
Q ss_pred HHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccccCCCCCCCcccccCCC
Q 018922 291 ALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVLI 348 (349)
Q Consensus 291 i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpl~~~ 348 (349)
+++++|.|+||.|++++|||||+++||+|+++|.++++++ +|+|.++++++|||+++
T Consensus 248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~ 304 (469)
T 3sza_A 248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISA 304 (469)
T ss_dssp HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCH
T ss_pred HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCH
Confidence 9999999999999999999999999999999999999998 59999999999999984
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.4e-58 Score=451.89 Aligned_cols=287 Identities=20% Similarity=0.237 Sum_probs=249.7
Q ss_pred EEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHH
Q 018922 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (349)
Q Consensus 52 ~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 131 (349)
.++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|.+++++|++++++|+|||..+++..+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3456688999999999999999 89999999999999999999999999999999999999998876434445555554
Q ss_pred HHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHH----H
Q 018922 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA----H 207 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~----~ 207 (349)
.+....+. .+ ..+.+.+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++ +
T Consensus 83 ~~~~~~~~-~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMKT-IG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCCC-SE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhcccc-cc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 44332211 11 122234456688899999999999999999999999999999999999999999999999865 4
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCC-CCCceeEcCCCCHHH
Q 018922 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNT 286 (349)
Q Consensus 208 ~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~g-G~~~~iV~~dad~~~ 286 (349)
++.++|+|+|++|+|++++.+.++.|++||+|+.|+||||+.+ .+.++. ++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5789999999999999988889999999999999999999984 445554 78998 7888 999999999999999
Q ss_pred HHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHh-------hcccccCCC-CCCCcccccCCC
Q 018922 287 AADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVLI 348 (349)
Q Consensus 287 a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~-------~~l~~g~p~-~~~~~~Gpl~~~ 348 (349)
|++.+++++|+|+||.|++++|||||+++||+|+++|.++. +.+++|+|+ ++++++||+++.
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~ 304 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVG 304 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCH
Confidence 99999999999999999999999999999999999999986 567899998 778999999864
No 48
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-58 Score=448.48 Aligned_cols=277 Identities=16% Similarity=0.164 Sum_probs=227.8
Q ss_pred EeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------C
Q 018922 40 ETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-------G 112 (349)
Q Consensus 40 ~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------G 112 (349)
-++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred Cchh----hhhhCcHHHHHHHHHHHHHhhhhhcCceeecc---CCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHh
Q 018922 113 KLHS----WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALA 185 (349)
Q Consensus 113 k~~~----~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~ 185 (349)
||+. ++. .|+..+++.++|+++.+++..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9987 455 6999999999999988877766553322 2334578899999999999887 77766 89999999
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC
Q 018922 186 AGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261 (349)
Q Consensus 186 aGN~vvlkps~~~~~t~~~l~~~l~~a----glP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 261 (349)
+||+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 7778999999999999999999999999998875
Q ss_pred CCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHH-HHHHHHHHHh
Q 018922 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD-EFEKKLVEKA 327 (349)
Q Consensus 262 ~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~-~f~~~l~~~~ 327 (349)
+||+++|+|||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++|| .+.+++.+.+
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~ 305 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDML 305 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHH
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHH
Confidence 799999999999999999999999999999999999 999999999999999987 3555555554
No 49
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.2e-56 Score=434.95 Aligned_cols=264 Identities=20% Similarity=0.280 Sum_probs=229.4
Q ss_pred EcCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHH-H
Q 018922 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R 131 (349)
Q Consensus 53 ~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 131 (349)
++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999 8999999999999999999999999999999999999999998744677777766 3
Q ss_pred HHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHH-
Q 018922 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~- 210 (349)
++... ...+ ..+.+.....+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 33321 1111 1222233446788999999999999999999999999999999999999999999999998888765
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHH
Q 018922 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (349)
Q Consensus 211 ---~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a 287 (349)
++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+++ .++. ++||+++|+|||+|+||++|||+++|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 799999999999998888999999999999999999998644 4444 78999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHH
Q 018922 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 326 (349)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~ 326 (349)
++.++.++|+|+||.|++++|||||+++||+|+++|.++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 269 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH 269 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999875
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.5e-55 Score=427.99 Aligned_cols=269 Identities=22% Similarity=0.227 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhh-------CcHHHH
Q 018922 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (349)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~ 126 (349)
.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 89999999999999999999999999999999999999853 4432 378899
Q ss_pred HHHHHHHHHhhhhhcCceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHH
Q 018922 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (349)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~ 203 (349)
++.+++++.+.+.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999876542 333332 23455688999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeE
Q 018922 204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (349)
Q Consensus 204 ~l~~~l----~~aglP~gvv~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV 278 (349)
.+++++ .++|+|+|++|+++|.+. .+++.|..||+|+.|+||||+.+|+.|++.+ +||+++|+|||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999986 799999999999998554 5788888999999999999999999998775 6899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc---cCCC
Q 018922 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPF 336 (349)
Q Consensus 279 ~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~---g~p~ 336 (349)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|.++++++++ |||.
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~ 315 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD 315 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH
Confidence 9999999999999999999999 9999999999999999999999999999998 8764
No 51
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=8.1e-56 Score=431.62 Aligned_cols=266 Identities=17% Similarity=0.191 Sum_probs=238.3
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhhCcHHH-HHHHHHHHH
Q 018922 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYA 134 (349)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~~ 134 (349)
.+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||. .++...|+.. +++.+++++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58899999999999 8999999999999999999999999999999999999998 7765458888 888899988
Q ss_pred Hhhhhhc------Cceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHH
Q 018922 135 GAADKIH------GEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205 (349)
Q Consensus 135 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l 205 (349)
+..+.+. ++..+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8776665 443331 12344678999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCcee
Q 018922 206 AHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (349)
Q Consensus 206 ~~~l~----~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~i 277 (349)
++++. + +|+|+|++|+|+ +++++++.|..||+||.|+||||+++|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6767899999999999999999999999999775 599999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc---cCCC
Q 018922 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPF 336 (349)
Q Consensus 278 V~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~---g~p~ 336 (349)
|++|||+|.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |||.
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~ 305 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKD 305 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHH
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHH
Confidence 99999999999999999999999 99999999999999 9999999999999998 8874
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=7.5e-55 Score=421.03 Aligned_cols=265 Identities=18% Similarity=0.200 Sum_probs=238.8
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhh-------hCcHHHH
Q 018922 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAK-------MGDIPGA 126 (349)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-------~~ev~~~ 126 (349)
.+++++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+||+. .++. ..|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 4689999999999999 8999999999999999999999999999999999999986 4443 1489999
Q ss_pred HHHHHHHHHhhhhhcCceeec---cCCccceEEeecceeEEEEcCCCccHHhhHHHHHhHHhcCCeEEEecCCCChHHHH
Q 018922 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (349)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~ 203 (349)
++.+++++++.+. .+...+. ..+...+++++|+|||++|+||| +...++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999987665 3443332 12334578899999999999876 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEEEeCC-chhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeE
Q 018922 204 YFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (349)
Q Consensus 204 ~l~~~l~----~aglP~gvv~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV 278 (349)
.|++++. ++|+|+|++|+|+|. ++++++.|..||+|+.|+||||+.+|+.|++.+ +||+++|+|||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999997 789999999999984 466788899999999999999999999999886 4899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecccHHHHHHHHHHHhhcccc
Q 018922 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (349)
Q Consensus 279 ~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~~~~~f~~~l~~~~~~l~~ 332 (349)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|.++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 296 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGV 296 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999 9999999999999999999999999998876
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=93.10 E-value=5.7 Score=37.13 Aligned_cols=239 Identities=17% Similarity=0.168 Sum_probs=124.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-CCc------hhhhh--------------hCcHHHHHHHHHHHHH
Q 018922 77 WPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-GKL------HSWAK--------------MGDIPGAANTLRYYAG 135 (349)
Q Consensus 77 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-Gk~------~~~a~--------------~~ev~~~~~~l~~~~~ 135 (349)
|+.....+-.+..+.+.+.++++.|+-....++.. |.. +.... ...++.+.+.++.|.+
T Consensus 27 r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh~ 106 (423)
T 4gic_A 27 WSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYAE 106 (423)
T ss_dssp CC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 55555555556666666666666665555444433 211 11000 0123334444554443
Q ss_pred hhhhhcCceeeccCCccceEEeecceeEEEEcCCC---ccHHhhHHHHHhHHhcCCe-EEE-ecCCCChHHHHHHHHHHH
Q 018922 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCT-MIV-KPAEQTPLIALYFAHLAK 210 (349)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~-vvl-kps~~~~~t~~~l~~~l~ 210 (349)
.... .........+.....++.|+--|++..|.- ||...+ ..++||-.+|.. +|+ -|++..-. .-.+.-+..
T Consensus 107 ~Q~~-~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvL-M~aiPAkVAGV~~Iv~~tPp~~G~i-~p~iL~AA~ 183 (423)
T 4gic_A 107 RQKL-DSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVL-MNAVPAKVAGVPELIMAVPAPRGEL-NALVLAAAY 183 (423)
T ss_dssp HHCC-CCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHH-HHHHHHHHHTCSEEEEECCCGGGCC-CHHHHHHHH
T ss_pred hccc-CCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHH-HhhccHHHhCCCeEEEecCCCCCCc-cHHHHHHHH
Confidence 2211 111112223455567789999999999964 665444 457899999986 343 34332111 122233345
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHc----CCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeCCCCCceeEc-CCCCHH
Q 018922 211 LAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF-DDVDVN 285 (349)
Q Consensus 211 ~aglP~gvv~~v~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~-~dad~~ 285 (349)
.+|+-+ +..-.|...-.+|.- -|.||.|+-.|..=+..+= +... +..-+=+.-|..--+||- +++|.+
T Consensus 184 l~Gv~e----Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AK--r~v~-g~VgIDm~AGPSEilViAD~~a~p~ 256 (423)
T 4gic_A 184 ISGVDR----VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAK--KLVF-GQVGIDMVAGPSEILVISDGRTDPD 256 (423)
T ss_dssp HHTCCE----EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH--HHHB-TTBEECCCCCCCEEEEEECSCSCHH
T ss_pred hcCCcE----EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHH--HHhc-CCcCcccccccceEEEEeCCCCCHH
Confidence 566543 222224444445553 5899999999997665432 2222 212222222333333433 348999
Q ss_pred HHHHHHHHHHhhhcCCCcccCceEEEecc--cHHHHHHHHHHHhhcc
Q 018922 286 TAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW 330 (349)
Q Consensus 286 ~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--~~~~f~~~l~~~~~~l 330 (349)
..+..++.-+=+... .+.++|..+ +.+++.+.+.+.++.+
T Consensus 257 ~vAaDLlsQAEHd~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l 298 (423)
T 4gic_A 257 WIAMDLFSQAEHDED-----AQAILISPDAAHLEAVQASIERLLPGM 298 (423)
T ss_dssp HHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhhccCCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhC
Confidence 998888776644432 456677555 5666766776666554
No 54
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=72.61 E-value=11 Score=24.32 Aligned_cols=47 Identities=15% Similarity=0.266 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 018922 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEA 108 (349)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~ 108 (349)
.+.++.++.+++.-.|-..|.|.. ..+|+-++..|++-+|.++..+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~------SNFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDK------SNFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTS------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchH------HHHHHHHHHhHHHHHHHHHHHhc
Confidence 466777777777778877788988 46788899999999999887764
No 55
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=71.64 E-value=66 Score=30.08 Aligned_cols=194 Identities=20% Similarity=0.246 Sum_probs=105.4
Q ss_pred cHHHHHHHHHHHHHhhhhhcCceeeccCCccceEEeecceeEEEEcCC---CccHHhhHHHHHhHHhcCCeEEEecCCCC
Q 018922 122 DIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIVKPAEQT 198 (349)
Q Consensus 122 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~AL~aGN~vvlkps~~~ 198 (349)
-++.+.+.++.|...... .........+.....++.|+.-|++..|. -||... +..++||-.+|..=|+--+|-.
T Consensus 87 ai~~A~~nI~~fH~~Q~~-~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~ 164 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKL-PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPP 164 (434)
T ss_dssp HHHHHHHHHHHHHHTTCC-CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHHH-HHHHHHHHHHTCSEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcC-CCceEEecCCcEEEEEEeehheEEEEecCCCCCchhHH-HHhhccHhhcCCCeEEEECCCC
Confidence 345566666666543222 11111122245556778999999999997 355444 4457899999987554322211
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH----cCCCCCEEEEeCChHHHHHHHHHHhhCCCcceEEeC-CCC
Q 018922 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL-GGK 273 (349)
Q Consensus 199 ~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~le~-gG~ 273 (349)
... .+.-+...+|+-+ +--+ | |.....+|. +-|.||.|+-.|..=+..+= +.... ....|-..+ .|-
T Consensus 165 -i~p-~iL~AA~l~Gv~e--Iy~v-G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AK-r~Vs~-~~G~VgIDm~AGP 236 (434)
T 1kae_A 165 -IAD-EILYAAQLCGVQD--VFNV-G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK-RQVSQ-RLDGAAIDMPAGP 236 (434)
T ss_dssp -CCH-HHHHHHHHTTCCE--EEEC-C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHHH-CTTSCEESCCCCC
T ss_pred -CCH-HHHHHHHHcCCCE--Eeec-c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHH-HHhHh-hcCccccCCCCCC
Confidence 111 2222345566543 2222 3 444444444 35899999999986654331 11211 111222222 233
Q ss_pred Cce-eE-cCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEecc--cHHHHHHHHHHHhhcc
Q 018922 274 SPL-LI-FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW 330 (349)
Q Consensus 274 ~~~-iV-~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--~~~~f~~~l~~~~~~l 330 (349)
+=+ || +++||.+..+..++.-+=+... .+.++|..+ +.+++.+.+.+.+..+
T Consensus 237 SEilViAD~tAnp~~vAaDLLsQAEHd~~-----a~aiLvT~s~~la~~V~~ev~~ql~~l 292 (434)
T 1kae_A 237 SEVLVIADSGATPDFVASDLLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAEL 292 (434)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhC
Confidence 333 33 3458999998888776644432 456666554 5677777776666655
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=69.57 E-value=10 Score=30.19 Aligned_cols=114 Identities=16% Similarity=0.135 Sum_probs=74.5
Q ss_pred eeEEEEcCCCc-cHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHHHHHcCC
Q 018922 161 GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGAAIASHM 237 (349)
Q Consensus 161 GVv~~i~p~n~-P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~-aglP~gvv~~v~g-~~~~~~~~l~~~~ 237 (349)
|.++++..-+. +-...+.+-...++.|-.++-= .-|+ +.|.+ .|+|...++-++. .++.+++.+. +.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~-~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGALIS-EG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHH-TT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHHHH-CC
Confidence 65555555444 5555555666677788887752 2333 44555 8999877765543 2345666555 56
Q ss_pred CCCEEEEeCC-------hHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcC
Q 018922 238 DIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (349)
Q Consensus 238 ~v~~v~ftGs-------~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~G 300 (349)
.|++|+||=+ ..-+..|.+.+.. +..|+...+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 9999999876 4577889999988 667776542 455667777766653
No 57
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=66.19 E-value=21 Score=29.30 Aligned_cols=39 Identities=21% Similarity=0.310 Sum_probs=32.6
Q ss_pred HhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 018922 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (349)
Q Consensus 184 L~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~ 225 (349)
-.+||-+|+|-.|.. +..++.++.+.++|++++-.|.|+
T Consensus 114 ~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 114 DHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp EECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred eecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 347999999977654 777888888888999999999984
No 58
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=64.40 E-value=7.7 Score=33.13 Aligned_cols=69 Identities=10% Similarity=0.158 Sum_probs=46.7
Q ss_pred HHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHH
Q 018922 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (349)
Q Consensus 177 ~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (349)
+..++..+.+||-||+|.+.. .....+..+|... +|.+++++++. ..+. ...-..+.+.+..+...-..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~~--~~~~s~~~~L~~l-LP~~c~~l~~~-s~~Y----~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRDV--DLVQSAFEVLRTM-LPVGCVRIIPY-SSQY----EEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSCH--HHHHHHHHHHGGG-SCGGGCCEEEE-ESSC----CCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCCH--HHHHHHHHHHHHh-CCHHHHhcccc-chhh----cchhheeeecCCCCcccCcc
Confidence 456777888999999998763 4555566777777 99999999865 2221 22234566776666555444
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=64.12 E-value=11 Score=29.70 Aligned_cols=62 Identities=13% Similarity=0.022 Sum_probs=45.6
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhHHHHHHcCCCCCEEEEeCCh-----HHHHHHHHHHhhCCCcceEEe
Q 018922 206 AHLAKLAGVPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRQVMQAAATSNLKPVSLE 269 (349)
Q Consensus 206 ~~~l~~aglP~gvv~~v~g~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~g~~i~~~~a~~~~~~~~le 269 (349)
++.|.+.|+|...++-++.. . +.+.+.+.+ ..|++|++|-+. .-+..|.+.+.. +..|++.+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR~Av~-~~IP~~T~ 131 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRRTAVD-SGIPLLTN 131 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHHHHHH-TTCCEECS
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHHHHHH-hCCCeEcC
Confidence 45567899998888877642 2 567776655 589999998655 367888888888 66787754
No 60
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=61.87 E-value=2.9 Score=32.71 Aligned_cols=81 Identities=16% Similarity=0.128 Sum_probs=52.0
Q ss_pred HHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhHHHHHHcCCCCCEEEEeCC-------h
Q 018922 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS-------T 248 (349)
Q Consensus 178 ~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~-aglP~gvv~~v~-g~~~~~~~~l~~~~~v~~v~ftGs-------~ 248 (349)
.+-...++.|-.++- +.-|+ +.|.+ .|+|-..++-++ +.++.+++.+.+ ..|++|+||=+ .
T Consensus 22 a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~-geIdlVInt~~pl~~~~h~ 91 (134)
T 2xw6_A 22 CQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVAE-GRILAVIFFRDPLTAQPHE 91 (134)
T ss_dssp HHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHT-TCEEEEEEECCTTTCCTTS
T ss_pred HHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHHC-CCccEEEEccCcccCCCcc
Confidence 333445555665554 23343 44555 799988887666 534566666654 69999999977 3
Q ss_pred HHHHHHHHHHhhCCCcceEEe
Q 018922 249 DVGRQVMQAAATSNLKPVSLE 269 (349)
Q Consensus 249 ~~g~~i~~~~a~~~~~~~~le 269 (349)
.-+..|.+.+.. +..|+...
T Consensus 92 ~D~~~IrR~A~~-~~IP~~T~ 111 (134)
T 2xw6_A 92 PDVQALLRVCDV-HGVPLATN 111 (134)
T ss_dssp CCSHHHHHHHHH-HTCCEECS
T ss_pred chHHHHHHHHHH-cCCCeEcC
Confidence 345778888877 55676643
No 61
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=52.66 E-value=13 Score=30.39 Aligned_cols=119 Identities=17% Similarity=0.087 Sum_probs=77.7
Q ss_pred Eeecc-eeEEEEcCCCc-cHHhhHHHHHhHHhcCCeEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHH
Q 018922 156 LREPI-GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGA 231 (349)
Q Consensus 156 ~~~P~-GVv~~i~p~n~-P~~~~~~~~~~AL~aGN~vvlkps~~~~~t~~~l~~~l~~-aglP~gvv~~v~g-~~~~~~~ 231 (349)
..-|. |.++++..-+. +-...+.+-...++.|-.++- +.-|+ +.|.+ .|+|...++-++. ..+.+++
T Consensus 22 ~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI~d 92 (178)
T 1vmd_A 22 IFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQIGA 92 (178)
T ss_dssp EEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHH
T ss_pred eeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchHHH
Confidence 33444 76666655544 555556666667778988775 33444 44555 8999877765543 2345666
Q ss_pred HHHcCCCCCEEEEeCC-------hHHHHHHHHHHhhCCCcceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcC
Q 018922 232 AIASHMDIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (349)
Q Consensus 232 ~l~~~~~v~~v~ftGs-------~~~g~~i~~~~a~~~~~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~G 300 (349)
.+. +..|++|+||=+ ..-+..|.+.|.. +..|+... -..++.++.+.+++..
T Consensus 93 ~I~-~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tn---------------latA~A~v~ail~~~~ 151 (178)
T 1vmd_A 93 MIA-EGKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAIT---------------RSTADFLISSPLMNDV 151 (178)
T ss_dssp HHH-TTSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESS---------------HHHHHHHHHSGGGGSC
T ss_pred HHH-CCCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeC---------------HHHHHHHHHHHhcccc
Confidence 555 579999999876 3456889999988 66777654 2456677777777754
No 62
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=46.51 E-value=43 Score=22.65 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=40.1
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (349)
Q Consensus 186 aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (349)
++|-+|+|-.+. .+..++.++.+.++|+ ++-.+.|++ . ..+..=+.+.+..+.+..
T Consensus 12 ~~n~vVikT~pG---~A~~va~~iD~~~~~e-I~GTIAGDD-T------------Ilvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPG---NAHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHHHCCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEeeCC-E------------EEEEECCHHHHHHHHHHH
Confidence 699999997765 4777888898888777 899998842 1 344455556666666554
No 63
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=46.22 E-value=46 Score=23.03 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=29.6
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 018922 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (349)
Q Consensus 186 aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~ 225 (349)
++|-+|+|-.|. .+..++.++.+..+|+ ++-.+.|+
T Consensus 20 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPG---AAHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTT---CHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecC
Confidence 799999997765 4778888898888876 89888884
No 64
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=45.16 E-value=15 Score=29.60 Aligned_cols=51 Identities=18% Similarity=0.209 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC--CCCCEEEEeCChHHH
Q 018922 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVG 251 (349)
Q Consensus 200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g 251 (349)
.....|++.+.+.|...-...+++.+ +.+.+.|.+. ...|.|..||++..+
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 35567888899999877777788776 7777666542 368999999988754
No 65
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=41.72 E-value=36 Score=23.61 Aligned_cols=37 Identities=19% Similarity=0.361 Sum_probs=30.8
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 018922 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (349)
Q Consensus 186 aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~ 225 (349)
++|-+|+|-.+. .+..++.++.+.+.+++++-.+.|+
T Consensus 14 ~~n~vVikT~PG---~A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPG---AAQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTT---THHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhcCCCCCeEEEEecC
Confidence 689999997754 4777888888887889999999984
No 66
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=41.09 E-value=42 Score=23.49 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=39.5
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (349)
Q Consensus 186 aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (349)
+||-+|+|-.+. .+..++.++.+.++|+ ++-.+.|++ . ..+..=+.+.+..+.+..
T Consensus 24 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGDD-T------------Ilvi~r~~~~a~~l~~~l 79 (83)
T 2p5m_A 24 ASHMIVLKTMPG---NAQAIGALMDNLDWDE-MMGTICGDD-T------------ILIICRTPEDTEGVKNRL 79 (83)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHTTTCTT-CCEEEECSS-E------------EEEECSSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecCC-E------------EEEEECCHHHHHHHHHHH
Confidence 699999997765 4778889898887776 899888842 1 344445556666665554
No 67
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=39.92 E-value=25 Score=27.10 Aligned_cols=44 Identities=14% Similarity=0.051 Sum_probs=32.1
Q ss_pred CcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhh
Q 018922 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (349)
Q Consensus 217 gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~ 260 (349)
|.+++++|+..++.......+++.+|.+||+......+.+.+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE 96 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 57888888665554444432579999999998888888777765
No 68
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=38.99 E-value=30 Score=27.79 Aligned_cols=52 Identities=21% Similarity=0.178 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc---CCCCCEEEEeCChHHH
Q 018922 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (349)
Q Consensus 200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (349)
.....|++.|.+.|+......+++.+-+.+.+.|.. ....|.|..||++..+
T Consensus 31 sn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 456778888999998765566676544555555543 1368999999998654
No 69
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=37.60 E-value=48 Score=26.63 Aligned_cols=52 Identities=19% Similarity=0.020 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH---cCCCCCEEEEeCChHHH
Q 018922 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA---SHMDIDKVSFTGSTDVG 251 (349)
Q Consensus 200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~---~~~~v~~v~ftGs~~~g 251 (349)
....+|++.|.+.|+.--...+++.+-+.+.+.+. .....|.|..||+...+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 46678999999999876666666654445555553 34678999999998644
No 70
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=37.57 E-value=18 Score=29.81 Aligned_cols=54 Identities=19% Similarity=0.055 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC--CCCCEEEEeCChHHHH
Q 018922 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (349)
Q Consensus 199 ~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g~ 252 (349)
-.....|++.+.+.|...-...+++.+-+.+.+.|... .+.|.|..||++..+.
T Consensus 48 Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 48 DHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred CcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 34567788899999977666677776555566665542 5789999999987653
No 71
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=35.83 E-value=90 Score=27.81 Aligned_cols=103 Identities=16% Similarity=0.126 Sum_probs=59.2
Q ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC--Cch--hHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC---C
Q 018922 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG--FGP--TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS---N 262 (349)
Q Consensus 190 vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g--~~~--~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~---~ 262 (349)
+|++|....-.....+.+.|.+.|+. +.+... .++ +....+.. ...+.|+..|+..+-..+...+... .
T Consensus 34 vi~Np~sg~~~~~~~i~~~l~~~g~~---~~~~~t~~~~~~~~~~~~~~~-~~~d~vvv~GGDGTl~~v~~~l~~~~~~~ 109 (332)
T 2bon_A 34 LILNGKSTDNLPLREAIMLLREEGMT---IHVRVTWEKGDAARYVEEARK-FGVATVIAGGGDGTINEVSTALIQCEGDD 109 (332)
T ss_dssp EEECSSSTTCHHHHHHHHHHHTTTCC---EEEEECCSTTHHHHHHHHHHH-HTCSEEEEEESHHHHHHHHHHHHHCCSSC
T ss_pred EEECCCCCCCchHHHHHHHHHHcCCc---EEEEEecCcchHHHHHHHHHh-cCCCEEEEEccchHHHHHHHHHhhcccCC
Confidence 44555543323344566777777765 333322 121 11222222 3578999999999999998888731 3
Q ss_pred Ccce-EEeCCCCC-ceeEcC-CCCHHHHHHHHHHHHh
Q 018922 263 LKPV-SLELGGKS-PLLIFD-DVDVNTAADMALLGIL 296 (349)
Q Consensus 263 ~~~~-~le~gG~~-~~iV~~-dad~~~a~~~i~~~~~ 296 (349)
..|+ ++-+|--| .+--.. ..|++.+++.++.+.+
T Consensus 110 ~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~g~~ 146 (332)
T 2bon_A 110 IPALGILPLGTANDFATSVGIPEALDKALKLAIAGDA 146 (332)
T ss_dssp CCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHHSEE
T ss_pred CCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHcCCe
Confidence 3454 34466444 332222 4589999998887655
No 72
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=30.46 E-value=82 Score=24.76 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=40.2
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHH
Q 018922 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (349)
Q Consensus 186 aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (349)
++|-+|+|-.+. .+..++.++...++|. ++-.+.|++ . ..+..=+...+..+.+..
T Consensus 90 ~~n~vVikT~PG---~A~~va~~iD~~~~~e-IlGTIAGDD-T------------Ilvi~r~~~~a~~l~~~l 145 (149)
T 1b4a_A 90 TGNLLVLRTLPG---NAHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 145 (149)
T ss_dssp ETTEEEEEESTT---CHHHHHHHHHHHTCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecCC-E------------EEEEeCCHHHHHHHHHHH
Confidence 799999997765 4778899998888876 899998843 1 344455556666665554
No 73
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=27.83 E-value=30 Score=28.15 Aligned_cols=54 Identities=17% Similarity=0.005 Sum_probs=37.4
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc---CCCCCEEEEeCChHHH
Q 018922 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (349)
Q Consensus 198 ~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (349)
.-.....|++.|.+.|...-...+++.+-+.+.+.|.+ ..+.|.|..||++..+
T Consensus 38 ~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g 94 (178)
T 2pjk_A 38 VDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred eehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 33566778889999998766566776655555555543 2248999999997754
No 74
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=26.79 E-value=1.1e+02 Score=24.66 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=31.1
Q ss_pred HHhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 018922 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 225 (349)
Q Consensus 183 AL~aGN~vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~ 225 (349)
.-.+||-+|+|-.+. .+..++.++...++| +++-.|.|+
T Consensus 108 v~~~~nlvVikT~PG---~A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 108 TDDSGNLAVLRTPPG---AAHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EEEETTEEEEECSTT---CHHHHHHHHHHHTCT-TEEEEEECS
T ss_pred EeecCCEEEEEeCCC---cHHHHHHHHHhCCCC-CeEEEEecC
Confidence 345799999997765 477788888888877 689988884
No 75
>3ce8_A Putative PII-like nitrogen regulatory protein; structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.40A {Shewanella baltica}
Probab=26.59 E-value=87 Score=23.68 Aligned_cols=35 Identities=9% Similarity=0.109 Sum_probs=26.4
Q ss_pred cceEEeCCCCCceeEcCCCCHHHHHHHHHHHHhhhcCCCcccCceEEEe
Q 018922 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312 (349)
Q Consensus 264 ~~~~le~gG~~~~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~~v~V~ 312 (349)
.++.+| +|.+|.+++..++.+..++ ..|+. ++||.
T Consensus 77 pKvkiE-------ivv~d~~ve~vv~aI~~~a--~tg~I-----KIfV~ 111 (120)
T 3ce8_A 77 EFCKFE-------IMHPAAQQAALLTALALVC--KHNPC-----RYWIM 111 (120)
T ss_dssp EEEEEE-------EEEEGGGHHHHHHHHHHHT--TTSCC-----EEEEE
T ss_pred ceEEEE-------EEECHHHHHHHHHHHHHHc--CCCCE-----EEEEE
Confidence 466777 7888999999999999884 44544 77764
No 76
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=25.97 E-value=15 Score=34.13 Aligned_cols=53 Identities=15% Similarity=0.127 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc-CCCCCEEEEeCChHHHH
Q 018922 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDVGR 252 (349)
Q Consensus 200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~-~~~v~~v~ftGs~~~g~ 252 (349)
.....|...+.+.|...-...+++.+-..+.+.|.+ ....|.|..||++..+.
T Consensus 211 sn~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 211 TNSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 345668888999987655566666543343333332 12478999999998764
No 77
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=25.78 E-value=83 Score=27.22 Aligned_cols=88 Identities=9% Similarity=0.044 Sum_probs=53.8
Q ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCCCEEEEeCChHHHHHHHHHHhhC-CCcc-eE
Q 018922 190 MIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKP-VS 267 (349)
Q Consensus 190 vvlkps~~~~~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~-~~~~-~~ 267 (349)
+|.+|.+.+......+.+.|.+.|+.- .....|.|+--|+..+-..+.+..... ..+| +-
T Consensus 5 ii~n~~~~~~~~~~~l~~~l~~~g~~v------------------~~~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilG 66 (272)
T 2i2c_A 5 ITSKGDEKSDLLRLNMIAGFGEYDMEY------------------DDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG 66 (272)
T ss_dssp EEECCSHHHHHHHHHHHHHHTTSSCEE------------------CSSSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEe------------------CCCCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEE
Confidence 445554333334445556666665431 024679999999999999998887652 1456 44
Q ss_pred EeCCCCCceeEcCCCCHHHHHHHHHHHH
Q 018922 268 LELGGKSPLLIFDDVDVNTAADMALLGI 295 (349)
Q Consensus 268 le~gG~~~~iV~~dad~~~a~~~i~~~~ 295 (349)
..+|-.+.+-=....|++.+++.++.+.
T Consensus 67 In~G~lgfl~~~~~~~~~~~l~~l~~g~ 94 (272)
T 2i2c_A 67 IHTGHLGFYADWRPAEADKLVKLLAKGE 94 (272)
T ss_dssp EESSSCCSSCCBCGGGHHHHHHHHHTTC
T ss_pred EeCCCCCcCCcCCHHHHHHHHHHHHcCC
Confidence 5655444221112457888888887764
No 78
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=23.91 E-value=75 Score=20.74 Aligned_cols=35 Identities=9% Similarity=0.140 Sum_probs=24.3
Q ss_pred HHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Q 018922 68 ARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLA 104 (349)
Q Consensus 68 A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 104 (349)
++.... .|..|+..+|..+...+...-..+..++.
T Consensus 30 ~k~lg~--~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 30 LKTVKE--NWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHH--HHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445 69999999999888776665555555543
No 79
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=22.93 E-value=92 Score=19.09 Aligned_cols=27 Identities=4% Similarity=0.016 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 018922 86 RGIMLKFADLIEEHAEVLAVLEALDAG 112 (349)
Q Consensus 86 ~~~L~~~a~~l~~~~~~l~~~~~~e~G 112 (349)
.++|..+...|.+-+++|..++-.|..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888888888888887766543
No 80
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=22.45 E-value=56 Score=26.25 Aligned_cols=52 Identities=21% Similarity=0.141 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc---CCCCCEEEEeCChHHH
Q 018922 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (349)
Q Consensus 200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (349)
.....|++.|.+.|+......+++.+-+.+.+.|.. ..+.|.|..||++..+
T Consensus 28 ~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 28 TSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred ccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 445678888999988655556666544455555543 2247899999988644
No 81
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=20.52 E-value=41 Score=31.27 Aligned_cols=52 Identities=15% Similarity=0.011 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc-CCCCCEEEEeCChHHHH
Q 018922 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS-HMDIDKVSFTGSTDVGR 252 (349)
Q Consensus 201 t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~-~~~v~~v~ftGs~~~g~ 252 (349)
....|...+.+.|...-...+++.+-+.+.+.|.. ....|.|..||++..+.
T Consensus 208 N~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlVittGG~s~g~ 260 (402)
T 1uz5_A 208 NGRALCDAINELGGEGIFMGVARDDKESLKALIEKAVNVGDVVVISGGASGGT 260 (402)
T ss_dssp HHHHHHHHHHHHTSEEEEEEEECSSHHHHHHHHHHHHHHCSEEEEECCC----
T ss_pred hHHHHHHHHHhCCCeEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEcCCCCCCC
Confidence 45668888899987665566666544445444432 12478999999998773
No 82
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=20.31 E-value=67 Score=25.95 Aligned_cols=52 Identities=17% Similarity=-0.031 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC-CCCCEEEEeCChHHH
Q 018922 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH-MDIDKVSFTGSTDVG 251 (349)
Q Consensus 200 ~t~~~l~~~l~~aglP~gvv~~v~g~~~~~~~~l~~~-~~v~~v~ftGs~~~g 251 (349)
..+..|++.|.+.|+......+++.+-..+.+.|... ...|.|..||++..+
T Consensus 23 tN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~~ 75 (172)
T 3kbq_A 23 TNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGPT 75 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCSSS
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcCC
Confidence 4567788899999987766777766545555555431 246888888877644
No 83
>4g6u_B EC869 CDII; beta-augmentation, DNAse, toxin, immunity; 2.35A {Escherichia coli O157}
Probab=20.02 E-value=2e+02 Score=23.27 Aligned_cols=83 Identities=14% Similarity=0.106 Sum_probs=54.9
Q ss_pred ceeecCeeeeC--CCCCeEEeecCCCCceeEEEcCCCHHHHHHHHHHHHhhcccCCCCCCC-HHHHHHHHHHHHHHHHHh
Q 018922 23 KLFINGEFVDS--VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS-GAERRGIMLKFADLIEEH 99 (349)
Q Consensus 23 ~~~i~g~~~~~--~~~~~~~~~~P~~g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~-~~~R~~~L~~~a~~l~~~ 99 (349)
..+.|+++..- -++--+...|| .+.+..--+..+..++-.++..|-...+ .++ .+++.+++.. +.+.+.
T Consensus 12 ~~~~n~~f~~I~T~sg~~l~~~Dp-~~~~~~L~~dvdd~~LG~~i~~AL~~SR-----~i~~~ee~~~~f~~--~~~~~~ 83 (177)
T 4g6u_B 12 NIFVTPDFLSVETYSGLGMTGRDP-LFSPRLLQPDVDDKSLGEEILQALSDSR-----TLDVLEERVAFFDL--EKSKEQ 83 (177)
T ss_dssp EEEECSSCEEEEEEEESSSEEECT-TSCCEEECTTCCHHHHHHHHHHHHHTCC-----BCCSHHHHHHHHCT--TTTHHH
T ss_pred EEEecCCEEEEEEEecCceEecCC-CCCCeeCCCCCCHHHHHHHHHHHHHhCC-----ccCCHHHHHHHhcc--hhhhHH
Confidence 45667776421 12223556677 4455555577888888888887766543 677 8999888874 455667
Q ss_pred HHHHHHHHHHHhCC
Q 018922 100 AEVLAVLEALDAGK 113 (349)
Q Consensus 100 ~~~l~~~~~~e~Gk 113 (349)
..++.+.+....|.
T Consensus 84 yk~w~~~lm~~yGY 97 (177)
T 4g6u_B 84 YAAWIATLMEKYGY 97 (177)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCC
Confidence 77777777777774
Done!