Query 018930
Match_columns 348
No_of_seqs 419 out of 2184
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 05:15:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018930.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018930hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 100.0 6.9E-36 1.5E-40 255.0 24.9 246 97-346 5-251 (255)
2 PLN02211 methyl indole-3-aceta 100.0 2.9E-34 6.3E-39 246.3 26.3 263 82-346 5-268 (273)
3 PLN02824 hydrolase, alpha/beta 100.0 1.9E-34 4.1E-39 251.4 24.6 252 82-347 16-293 (294)
4 TIGR02240 PHA_depoly_arom poly 100.0 5.8E-34 1.3E-38 246.1 22.8 250 81-347 9-265 (276)
5 PRK00870 haloalkane dehalogena 100.0 5.6E-33 1.2E-37 243.0 23.9 264 75-347 23-300 (302)
6 PLN02679 hydrolase, alpha/beta 100.0 6E-33 1.3E-37 247.6 24.3 251 82-347 69-356 (360)
7 TIGR03343 biphenyl_bphD 2-hydr 100.0 2E-32 4.3E-37 237.5 22.9 255 83-346 19-281 (282)
8 PRK03204 haloalkane dehalogena 100.0 2.4E-32 5.1E-37 236.6 23.1 258 82-346 22-286 (286)
9 PRK03592 haloalkane dehalogena 100.0 3.4E-32 7.4E-37 237.4 24.1 259 81-346 14-287 (295)
10 PRK10349 carboxylesterase BioH 100.0 3.1E-32 6.6E-37 232.8 21.7 234 95-346 13-254 (256)
11 KOG4178 Soluble epoxide hydrol 100.0 5.6E-32 1.2E-36 225.5 22.1 259 79-346 27-318 (322)
12 TIGR03056 bchO_mg_che_rel puta 100.0 1.3E-31 2.7E-36 231.8 24.1 252 81-346 13-278 (278)
13 TIGR03611 RutD pyrimidine util 100.0 1.3E-31 2.8E-36 228.8 22.8 242 93-347 11-257 (257)
14 PRK10673 acyl-CoA esterase; Pr 100.0 1.7E-31 3.7E-36 228.1 21.3 237 93-347 14-254 (255)
15 PLN03084 alpha/beta hydrolase 100.0 7.9E-31 1.7E-35 233.0 24.9 259 81-346 112-382 (383)
16 PLN02578 hydrolase 100.0 1.3E-30 2.8E-35 232.4 25.7 251 82-346 74-353 (354)
17 PLN02385 hydrolase; alpha/beta 100.0 6.6E-31 1.4E-35 234.2 22.7 256 78-346 66-343 (349)
18 PLN03087 BODYGUARD 1 domain co 100.0 1.6E-30 3.4E-35 235.3 25.1 259 82-346 184-477 (481)
19 PRK06489 hypothetical protein; 100.0 1.3E-30 2.7E-35 233.1 23.2 256 81-347 47-356 (360)
20 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.4E-30 5.2E-35 219.7 21.6 238 94-346 12-251 (251)
21 TIGR01738 bioH putative pimelo 100.0 2.6E-30 5.7E-35 218.7 20.7 233 95-345 4-245 (245)
22 PLN02652 hydrolase; alpha/beta 100.0 1.1E-29 2.5E-34 227.0 25.5 298 19-346 70-385 (395)
23 PHA02857 monoglyceride lipase; 100.0 1.6E-29 3.6E-34 218.4 22.6 247 81-346 8-271 (276)
24 KOG4409 Predicted hydrolase/ac 100.0 1.9E-29 4.1E-34 210.8 21.6 250 91-347 86-363 (365)
25 PRK11126 2-succinyl-6-hydroxy- 100.0 1.2E-29 2.7E-34 214.9 21.0 227 95-346 2-240 (242)
26 KOG1454 Predicted hydrolase/ac 100.0 9.2E-30 2E-34 221.3 19.3 251 94-347 57-323 (326)
27 PRK08775 homoserine O-acetyltr 100.0 1.7E-29 3.6E-34 224.5 20.7 250 82-346 44-337 (343)
28 TIGR01250 pro_imino_pep_2 prol 100.0 9.4E-29 2E-33 214.4 24.6 248 94-346 24-288 (288)
29 PLN02298 hydrolase, alpha/beta 100.0 3.3E-29 7.1E-34 221.9 22.1 254 80-346 39-315 (330)
30 PRK10749 lysophospholipase L2; 100.0 9.6E-29 2.1E-33 218.4 23.5 259 80-347 37-328 (330)
31 PF12697 Abhydrolase_6: Alpha/ 100.0 4.4E-30 9.6E-35 214.6 13.4 221 98-340 1-228 (228)
32 PRK07581 hypothetical protein; 100.0 6.5E-29 1.4E-33 220.7 20.3 258 82-346 24-334 (339)
33 PLN02894 hydrolase, alpha/beta 100.0 1.4E-27 3E-32 215.3 29.0 109 91-201 101-213 (402)
34 TIGR03695 menH_SHCHC 2-succiny 100.0 1.9E-28 4.2E-33 207.7 20.3 243 95-346 1-251 (251)
35 TIGR01392 homoserO_Ac_trn homo 100.0 1.6E-28 3.5E-33 218.9 19.4 260 81-346 13-351 (351)
36 PRK00175 metX homoserine O-ace 100.0 9.7E-28 2.1E-32 215.5 20.0 257 82-347 31-373 (379)
37 PRK14875 acetoin dehydrogenase 100.0 6.7E-27 1.5E-31 210.8 23.6 248 82-347 117-370 (371)
38 COG2267 PldB Lysophospholipase 99.9 4.8E-26 1E-30 196.2 22.6 258 79-347 15-293 (298)
39 TIGR01249 pro_imino_pep_1 prol 99.9 8.4E-26 1.8E-30 197.8 20.8 119 80-200 11-131 (306)
40 PLN02511 hydrolase 99.9 2.9E-26 6.3E-31 205.9 17.7 250 79-346 77-363 (388)
41 PLN02980 2-oxoglutarate decarb 99.9 9.8E-26 2.1E-30 232.2 23.4 240 94-347 1370-1638(1655)
42 KOG1455 Lysophospholipase [Lip 99.9 1.9E-25 4.1E-30 183.5 19.5 241 95-347 54-311 (313)
43 PRK05855 short chain dehydroge 99.9 2.6E-25 5.5E-30 212.2 20.2 252 81-346 10-290 (582)
44 TIGR01607 PST-A Plasmodium sub 99.9 1.8E-24 3.9E-29 190.6 20.7 255 81-347 5-332 (332)
45 COG1647 Esterase/lipase [Gener 99.9 1.2E-24 2.7E-29 170.1 15.6 219 95-346 15-242 (243)
46 PRK05077 frsA fermentation/res 99.9 2.1E-23 4.6E-28 188.2 25.5 235 73-346 168-410 (414)
47 KOG2382 Predicted alpha/beta h 99.9 8E-24 1.7E-28 177.0 19.3 240 93-347 50-312 (315)
48 TIGR03100 hydr1_PEP hydrolase, 99.9 1.7E-22 3.6E-27 173.7 22.7 226 94-346 25-273 (274)
49 PRK10985 putative hydrolase; P 99.9 8E-23 1.7E-27 180.1 19.8 237 94-345 57-317 (324)
50 PRK06765 homoserine O-acetyltr 99.9 2.2E-22 4.7E-27 179.5 20.9 252 94-347 55-387 (389)
51 PRK11071 esterase YqiA; Provis 99.9 4.5E-22 9.8E-27 160.9 19.2 184 96-346 2-189 (190)
52 PRK13604 luxD acyl transferase 99.9 1.8E-21 3.8E-26 164.9 22.8 221 77-336 13-251 (307)
53 KOG2984 Predicted hydrolase [G 99.9 1.3E-23 2.8E-28 161.5 7.9 242 81-346 28-274 (277)
54 PF00561 Abhydrolase_1: alpha/ 99.9 2.3E-23 4.9E-28 174.8 4.7 211 123-342 1-229 (230)
55 PRK10566 esterase; Provisional 99.9 9.3E-21 2E-25 161.2 18.5 204 94-347 26-247 (249)
56 COG0596 MhpC Predicted hydrola 99.9 5E-20 1.1E-24 157.0 22.4 243 95-347 21-281 (282)
57 PLN02872 triacylglycerol lipas 99.9 1.6E-20 3.5E-25 167.5 19.5 246 94-346 73-387 (395)
58 TIGR01838 PHA_synth_I poly(R)- 99.9 2.3E-20 5.1E-25 170.9 19.3 234 94-335 187-462 (532)
59 TIGR01836 PHA_synth_III_C poly 99.9 8E-20 1.7E-24 162.9 19.7 247 95-347 62-349 (350)
60 PF06342 DUF1057: Alpha/beta h 99.8 1.1E-18 2.5E-23 142.8 20.5 233 97-346 37-297 (297)
61 PF12695 Abhydrolase_5: Alpha/ 99.8 9.8E-20 2.1E-24 141.5 13.8 144 97-328 1-145 (145)
62 KOG2564 Predicted acetyltransf 99.8 2.2E-20 4.7E-25 151.1 9.6 105 93-198 72-181 (343)
63 PRK07868 acyl-CoA synthetase; 99.8 1.2E-18 2.6E-23 174.4 21.8 245 94-346 66-359 (994)
64 KOG4667 Predicted esterase [Li 99.8 2.7E-18 5.8E-23 133.8 17.3 239 74-345 11-255 (269)
65 KOG1552 Predicted alpha/beta h 99.8 2.5E-18 5.5E-23 139.0 16.2 207 76-346 38-250 (258)
66 TIGR03101 hydr2_PEP hydrolase, 99.8 1.9E-18 4.2E-23 145.7 15.1 119 80-200 7-135 (266)
67 PRK11460 putative hydrolase; P 99.8 2E-17 4.3E-22 138.3 18.0 174 93-345 14-209 (232)
68 COG0429 Predicted hydrolase of 99.7 2.7E-16 5.9E-21 131.6 18.2 241 93-346 73-338 (345)
69 PLN02442 S-formylglutathione h 99.7 5.3E-16 1.1E-20 133.8 20.7 107 93-200 45-179 (283)
70 KOG4391 Predicted alpha/beta h 99.7 1.4E-16 3.1E-21 124.3 14.5 218 74-346 55-280 (300)
71 COG3208 GrsT Predicted thioest 99.7 3.2E-16 6.8E-21 126.1 14.7 226 93-346 5-234 (244)
72 TIGR02821 fghA_ester_D S-formy 99.7 1.5E-15 3.2E-20 130.8 20.0 107 93-200 40-174 (275)
73 PF00326 Peptidase_S9: Prolyl 99.7 4.1E-16 8.8E-21 129.3 14.2 192 110-346 2-207 (213)
74 PLN00021 chlorophyllase 99.7 9.2E-16 2E-20 133.1 16.8 101 92-198 49-165 (313)
75 COG1506 DAP2 Dipeptidyl aminop 99.7 2E-15 4.4E-20 143.6 18.8 229 71-346 363-614 (620)
76 KOG2931 Differentiation-relate 99.7 3.9E-14 8.5E-19 116.1 22.6 248 88-346 37-304 (326)
77 COG2021 MET2 Homoserine acetyl 99.7 1.3E-14 2.7E-19 123.7 20.1 252 94-347 50-367 (368)
78 PF06500 DUF1100: Alpha/beta h 99.7 7.3E-15 1.6E-19 128.6 19.0 233 72-346 164-407 (411)
79 PF03096 Ndr: Ndr family; Int 99.7 9.2E-15 2E-19 121.6 17.9 242 88-346 14-277 (283)
80 TIGR01840 esterase_phb esteras 99.7 4.6E-15 9.9E-20 122.8 16.2 108 93-200 11-131 (212)
81 KOG1838 Alpha/beta hydrolase [ 99.7 3.4E-14 7.4E-19 123.5 20.8 224 94-333 124-368 (409)
82 TIGR03230 lipo_lipase lipoprot 99.6 2E-15 4.3E-20 134.8 13.1 107 92-200 38-155 (442)
83 PF02230 Abhydrolase_2: Phosph 99.6 5.7E-15 1.2E-19 122.5 14.2 177 92-346 11-213 (216)
84 COG2945 Predicted hydrolase of 99.6 2.9E-14 6.2E-19 109.8 15.3 174 93-346 26-205 (210)
85 PF06821 Ser_hydrolase: Serine 99.6 9.9E-15 2.1E-19 115.2 12.5 154 98-332 1-157 (171)
86 PF01738 DLH: Dienelactone hyd 99.6 6.1E-14 1.3E-18 116.7 17.6 177 94-347 13-216 (218)
87 cd00707 Pancreat_lipase_like P 99.6 4.7E-15 1E-19 126.9 10.5 108 91-200 32-148 (275)
88 PRK10162 acetyl esterase; Prov 99.6 4.4E-13 9.5E-18 117.7 20.9 122 75-200 59-196 (318)
89 PF00975 Thioesterase: Thioest 99.6 1.7E-13 3.6E-18 115.0 17.2 220 96-345 1-229 (229)
90 PF08538 DUF1749: Protein of u 99.5 1.1E-13 2.4E-18 116.4 12.5 235 94-346 32-303 (303)
91 TIGR00976 /NonD putative hydro 99.5 7.2E-13 1.6E-17 125.0 19.5 119 79-199 2-132 (550)
92 PF10230 DUF2305: Uncharacteri 99.5 9.9E-13 2.1E-17 111.9 18.1 113 95-207 2-130 (266)
93 PF05728 UPF0227: Uncharacteri 99.5 2.3E-12 5E-17 102.8 18.8 182 98-346 2-187 (187)
94 COG0400 Predicted esterase [Ge 99.5 4.1E-13 8.9E-18 108.4 12.9 172 92-342 15-203 (207)
95 TIGR01839 PHA_synth_II poly(R) 99.5 2.3E-12 5E-17 117.4 17.9 103 95-202 215-331 (560)
96 KOG2565 Predicted hydrolases o 99.5 1.2E-12 2.5E-17 110.7 14.1 116 80-196 130-261 (469)
97 PF05448 AXE1: Acetyl xylan es 99.5 9.8E-12 2.1E-16 108.2 19.4 230 75-346 58-318 (320)
98 COG4757 Predicted alpha/beta h 99.4 2.1E-12 4.6E-17 102.3 12.7 246 76-345 8-280 (281)
99 TIGR03502 lipase_Pla1_cef extr 99.4 1E-12 2.2E-17 124.7 12.6 90 95-184 449-575 (792)
100 PF12146 Hydrolase_4: Putative 99.4 5.1E-13 1.1E-17 90.8 7.7 64 95-158 16-79 (79)
101 COG0412 Dienelactone hydrolase 99.4 2.8E-11 6.1E-16 101.0 19.0 160 95-332 27-206 (236)
102 PRK10115 protease 2; Provision 99.4 1.8E-11 3.9E-16 117.5 19.4 127 72-199 415-559 (686)
103 TIGR01849 PHB_depoly_PhaZ poly 99.4 3.7E-11 8E-16 106.5 19.2 104 96-203 103-212 (406)
104 COG3571 Predicted hydrolase of 99.4 5.1E-11 1.1E-15 89.0 14.8 160 97-329 16-182 (213)
105 PF09752 DUF2048: Uncharacteri 99.4 6.6E-11 1.4E-15 101.2 17.5 232 93-346 90-347 (348)
106 COG3545 Predicted esterase of 99.4 9.8E-11 2.1E-15 89.5 16.0 171 96-346 3-177 (181)
107 PRK10252 entF enterobactin syn 99.4 1.2E-11 2.6E-16 128.8 15.0 103 93-199 1066-1171(1296)
108 COG3319 Thioesterase domains o 99.3 5.7E-11 1.2E-15 99.0 15.5 101 96-200 1-104 (257)
109 PF02273 Acyl_transf_2: Acyl t 99.3 5.4E-11 1.2E-15 95.4 14.2 226 78-337 7-245 (294)
110 COG3458 Acetyl esterase (deace 99.3 2.1E-11 4.5E-16 99.1 11.3 227 75-346 58-315 (321)
111 PF12740 Chlorophyllase2: Chlo 99.3 2.7E-11 5.9E-16 100.2 12.0 106 92-199 14-131 (259)
112 PF07819 PGAP1: PGAP1-like pro 99.3 8.7E-11 1.9E-15 97.3 12.4 105 94-202 3-126 (225)
113 COG3243 PhaC Poly(3-hydroxyalk 99.3 1.3E-10 2.9E-15 100.7 13.8 103 95-202 107-220 (445)
114 PF06028 DUF915: Alpha/beta hy 99.2 6.9E-10 1.5E-14 92.9 16.1 202 94-345 10-252 (255)
115 PF07859 Abhydrolase_3: alpha/ 99.2 2.5E-10 5.4E-15 94.4 13.4 98 98-200 1-111 (211)
116 KOG2624 Triglyceride lipase-ch 99.2 1.3E-09 2.8E-14 96.6 17.3 126 75-201 50-201 (403)
117 KOG4627 Kynurenine formamidase 99.2 2.1E-10 4.5E-15 89.4 10.7 203 86-345 58-268 (270)
118 PF03959 FSH1: Serine hydrolas 99.2 1.2E-10 2.5E-15 96.1 9.9 164 94-333 3-206 (212)
119 PF06057 VirJ: Bacterial virul 99.2 4.2E-10 9.2E-15 88.1 12.0 98 96-200 3-108 (192)
120 PF02129 Peptidase_S15: X-Pro 99.2 3.7E-10 8.1E-15 97.1 11.9 107 93-201 18-138 (272)
121 PF10503 Esterase_phd: Esteras 99.2 1.9E-09 4.1E-14 88.2 14.8 108 94-201 15-134 (220)
122 PRK05371 x-prolyl-dipeptidyl a 99.1 2.6E-09 5.7E-14 103.5 18.2 85 113-199 270-373 (767)
123 KOG2551 Phospholipase/carboxyh 99.1 3.7E-09 8E-14 84.0 15.6 175 94-345 4-221 (230)
124 PF03403 PAF-AH_p_II: Platelet 99.1 8.8E-10 1.9E-14 98.3 13.0 105 93-199 98-262 (379)
125 KOG3975 Uncharacterized conser 99.1 5.6E-09 1.2E-13 84.1 15.9 240 92-346 26-301 (301)
126 PTZ00472 serine carboxypeptida 99.1 9.2E-09 2E-13 94.4 19.6 105 93-199 75-216 (462)
127 COG0657 Aes Esterase/lipase [L 99.0 9.5E-09 2.1E-13 90.3 14.9 105 94-202 78-194 (312)
128 KOG2112 Lysophospholipase [Lip 99.0 4.4E-09 9.6E-14 83.0 9.7 173 96-341 4-201 (206)
129 KOG3043 Predicted hydrolase re 99.0 1.9E-08 4.1E-13 80.0 13.2 163 88-330 31-211 (242)
130 PF07224 Chlorophyllase: Chlor 99.0 2.4E-09 5.1E-14 87.1 8.3 107 92-200 43-158 (307)
131 PLN02733 phosphatidylcholine-s 99.0 2.4E-09 5.2E-14 96.8 9.2 95 106-202 105-204 (440)
132 COG4188 Predicted dienelactone 99.0 3.7E-09 8E-14 91.0 9.5 92 94-186 70-181 (365)
133 PRK04940 hypothetical protein; 99.0 2.1E-07 4.5E-12 73.0 18.2 171 98-347 2-179 (180)
134 KOG2100 Dipeptidyl aminopeptid 98.9 2.7E-08 5.8E-13 96.3 15.0 199 94-346 525-745 (755)
135 smart00824 PKS_TE Thioesterase 98.9 9E-08 2E-12 78.8 15.7 97 100-200 2-103 (212)
136 PF01674 Lipase_2: Lipase (cla 98.9 2.9E-09 6.2E-14 87.0 5.2 87 96-185 2-96 (219)
137 KOG1515 Arylacetamide deacetyl 98.8 1.3E-06 2.9E-11 76.0 21.2 121 77-202 67-210 (336)
138 PF00151 Lipase: Lipase; Inte 98.8 4.8E-09 1E-13 91.7 4.9 109 92-201 68-189 (331)
139 KOG3847 Phospholipase A2 (plat 98.8 7E-08 1.5E-12 80.4 10.8 176 92-346 115-346 (399)
140 PF12715 Abhydrolase_7: Abhydr 98.8 1.3E-07 2.9E-12 82.1 12.9 124 73-197 88-258 (390)
141 PF08840 BAAT_C: BAAT / Acyl-C 98.8 2E-08 4.4E-13 82.7 6.7 51 149-200 5-57 (213)
142 KOG2281 Dipeptidyl aminopeptid 98.7 1.1E-07 2.5E-12 86.3 11.7 204 94-347 641-866 (867)
143 PF05990 DUF900: Alpha/beta hy 98.7 1.3E-07 2.8E-12 78.9 10.2 107 93-200 16-138 (233)
144 KOG4840 Predicted hydrolases o 98.7 8.4E-07 1.8E-11 70.4 13.7 102 95-200 36-145 (299)
145 PF05705 DUF829: Eukaryotic pr 98.7 2.3E-06 4.9E-11 72.2 17.4 220 97-345 1-240 (240)
146 COG4099 Predicted peptidase [G 98.7 2.4E-07 5.1E-12 76.8 9.9 99 96-198 192-303 (387)
147 PF11339 DUF3141: Protein of u 98.6 7.5E-06 1.6E-10 73.5 19.8 79 114-199 93-175 (581)
148 PF00450 Peptidase_S10: Serine 98.6 7.2E-06 1.6E-10 75.2 19.9 107 93-200 38-182 (415)
149 PF03583 LIP: Secretory lipase 98.6 8.4E-07 1.8E-11 76.6 12.6 58 288-345 219-282 (290)
150 COG4814 Uncharacterized protei 98.6 3.6E-06 7.7E-11 68.5 14.7 104 96-200 46-177 (288)
151 COG1075 LipA Predicted acetylt 98.6 2E-07 4.4E-12 82.2 7.7 102 96-201 60-166 (336)
152 KOG1553 Predicted alpha/beta h 98.6 3.2E-07 6.9E-12 77.6 8.3 101 95-198 243-344 (517)
153 PF05677 DUF818: Chlamydia CHL 98.5 4.8E-06 1E-10 71.1 14.9 90 92-185 134-236 (365)
154 COG2936 Predicted acyl esteras 98.5 3.4E-06 7.3E-11 77.4 13.9 129 72-200 18-160 (563)
155 PF05057 DUF676: Putative seri 98.5 5.6E-07 1.2E-11 74.4 7.4 87 95-183 4-97 (217)
156 PLN02606 palmitoyl-protein thi 98.4 2.8E-05 6E-10 66.0 17.0 102 95-200 26-133 (306)
157 COG3509 LpqC Poly(3-hydroxybut 98.4 3.7E-06 8.1E-11 70.2 10.7 107 93-199 59-179 (312)
158 PF12048 DUF3530: Protein of u 98.4 0.00011 2.5E-09 64.0 20.3 106 95-201 87-231 (310)
159 PLN02209 serine carboxypeptida 98.4 2.9E-05 6.4E-10 70.7 16.7 59 288-347 351-434 (437)
160 PF04301 DUF452: Protein of un 98.4 5.4E-06 1.2E-10 67.1 10.6 82 94-201 10-92 (213)
161 PF05577 Peptidase_S28: Serine 98.2 8.4E-06 1.8E-10 75.1 10.8 108 93-200 27-149 (434)
162 PF00756 Esterase: Putative es 98.2 2.3E-06 4.9E-11 72.8 6.5 109 93-201 22-152 (251)
163 PRK10439 enterobactin/ferric e 98.2 2.6E-05 5.6E-10 70.7 13.4 116 84-199 194-323 (411)
164 KOG3253 Predicted alpha/beta h 98.2 5.5E-06 1.2E-10 75.2 8.6 159 95-333 176-350 (784)
165 PLN03016 sinapoylglucose-malat 98.2 0.00048 1E-08 62.9 21.3 59 288-347 347-430 (433)
166 KOG1551 Uncharacterized conser 98.2 7.1E-06 1.5E-10 67.0 7.9 240 91-346 109-364 (371)
167 COG4782 Uncharacterized protei 98.2 1.5E-05 3.1E-10 68.6 9.7 106 93-199 114-234 (377)
168 PF08386 Abhydrolase_4: TAP-li 98.1 1.2E-05 2.6E-10 57.9 7.1 59 288-346 34-92 (103)
169 PF10340 DUF2424: Protein of u 98.1 0.00026 5.6E-09 62.3 16.1 105 94-201 121-237 (374)
170 KOG3724 Negative regulator of 98.1 5.1E-05 1.1E-09 71.2 12.2 104 94-201 88-222 (973)
171 PF02450 LCAT: Lecithin:choles 98.0 2.1E-05 4.6E-10 71.0 8.7 83 110-202 66-163 (389)
172 KOG1282 Serine carboxypeptidas 98.0 0.00042 9.2E-09 62.9 16.6 125 75-200 48-214 (454)
173 KOG3101 Esterase D [General fu 98.0 3.7E-05 8E-10 60.9 8.5 106 94-200 43-177 (283)
174 COG1073 Hydrolases of the alph 98.0 0.00011 2.3E-09 63.8 11.3 58 289-346 233-295 (299)
175 COG3150 Predicted esterase [Ge 97.9 4.4E-05 9.5E-10 58.2 6.3 89 98-200 2-92 (191)
176 COG1770 PtrB Protease II [Amin 97.8 0.0022 4.8E-08 59.7 17.5 128 73-200 419-563 (682)
177 cd00312 Esterase_lipase Estera 97.8 7E-05 1.5E-09 70.3 7.9 106 93-200 93-214 (493)
178 COG1505 Serine proteases of th 97.7 0.00087 1.9E-08 61.6 13.6 124 74-197 395-533 (648)
179 PF02089 Palm_thioest: Palmito 97.7 6.9E-05 1.5E-09 63.1 5.4 105 94-199 4-116 (279)
180 PF10142 PhoPQ_related: PhoPQ- 97.7 0.00049 1.1E-08 60.8 10.4 156 151-345 157-317 (367)
181 KOG3967 Uncharacterized conser 97.6 0.00078 1.7E-08 53.6 10.3 106 94-200 100-228 (297)
182 PLN02633 palmitoyl protein thi 97.6 0.0011 2.4E-08 56.5 10.8 102 94-199 24-131 (314)
183 PLN02213 sinapoylglucose-malat 97.6 0.017 3.7E-07 50.9 18.7 59 288-347 233-316 (319)
184 KOG2183 Prolylcarboxypeptidase 97.5 0.00029 6.3E-09 61.6 7.3 104 96-199 81-202 (492)
185 PLN02517 phosphatidylcholine-s 97.5 0.00029 6.3E-09 65.1 7.1 91 109-201 156-265 (642)
186 KOG2237 Predicted serine prote 97.5 0.0015 3.2E-08 60.5 11.5 127 73-199 441-584 (712)
187 KOG2541 Palmitoyl protein thio 97.5 0.0017 3.8E-08 53.7 10.2 100 96-199 24-128 (296)
188 KOG2182 Hydrolytic enzymes of 97.4 0.0013 2.8E-08 59.2 9.8 109 92-200 83-208 (514)
189 COG0627 Predicted esterase [Ge 97.4 0.0008 1.7E-08 58.5 8.2 109 94-202 53-190 (316)
190 PF07082 DUF1350: Protein of u 97.4 0.0019 4.1E-08 53.2 9.6 100 96-197 18-123 (250)
191 PF06259 Abhydrolase_8: Alpha/ 97.3 0.0073 1.6E-07 47.8 12.1 106 95-200 19-145 (177)
192 cd00741 Lipase Lipase. Lipase 97.3 0.0007 1.5E-08 52.7 6.4 54 148-201 9-69 (153)
193 PF01764 Lipase_3: Lipase (cla 97.1 0.0012 2.7E-08 50.4 5.7 37 147-184 48-84 (140)
194 COG2272 PnbA Carboxylesterase 97.0 0.0039 8.5E-08 56.4 8.4 118 82-200 78-218 (491)
195 KOG2369 Lecithin:cholesterol a 97.0 0.00095 2.1E-08 59.7 4.4 84 109-199 124-225 (473)
196 KOG2521 Uncharacterized conser 97.0 0.025 5.4E-07 49.6 12.9 234 94-346 37-288 (350)
197 COG3946 VirJ Type IV secretory 96.9 0.0036 7.7E-08 54.9 7.3 87 94-187 259-349 (456)
198 PF00135 COesterase: Carboxyle 96.8 0.004 8.7E-08 59.1 7.9 119 82-200 107-246 (535)
199 PF11187 DUF2974: Protein of u 96.8 0.0037 8E-08 51.7 6.1 38 164-201 84-125 (224)
200 PF11144 DUF2920: Protein of u 96.8 0.019 4.1E-07 51.1 10.6 34 165-198 185-218 (403)
201 COG4553 DepA Poly-beta-hydroxy 96.6 0.19 4.2E-06 42.4 14.6 104 95-202 103-212 (415)
202 COG2819 Predicted hydrolase of 96.5 0.0044 9.5E-08 51.7 5.0 36 164-199 137-172 (264)
203 PF11288 DUF3089: Protein of u 96.4 0.0068 1.5E-07 49.0 5.5 42 144-185 75-116 (207)
204 cd00519 Lipase_3 Lipase (class 96.4 0.0074 1.6E-07 50.4 5.9 21 164-184 128-148 (229)
205 KOG1202 Animal-type fatty acid 96.4 0.01 2.2E-07 59.0 7.0 100 90-199 2118-2219(2376)
206 PLN02162 triacylglycerol lipas 96.1 0.017 3.7E-07 52.3 6.8 35 148-183 263-297 (475)
207 COG2830 Uncharacterized protei 96.1 0.027 5.9E-07 42.9 6.6 79 96-200 12-91 (214)
208 PLN00413 triacylglycerol lipas 96.0 0.024 5.3E-07 51.4 7.0 51 148-199 269-327 (479)
209 COG2939 Carboxypeptidase C (ca 95.8 0.041 8.9E-07 50.1 7.7 108 94-202 100-239 (498)
210 PLN02454 triacylglycerol lipas 95.6 0.021 4.6E-07 51.1 5.2 34 151-184 214-248 (414)
211 PLN02571 triacylglycerol lipas 95.6 0.02 4.4E-07 51.3 5.0 38 147-184 208-246 (413)
212 PLN02310 triacylglycerol lipas 95.5 0.039 8.4E-07 49.4 6.4 38 147-184 189-229 (405)
213 KOG4372 Predicted alpha/beta h 95.3 0.025 5.3E-07 50.0 4.3 89 93-183 78-169 (405)
214 PLN02408 phospholipase A1 95.2 0.031 6.8E-07 49.4 4.9 36 149-184 184-220 (365)
215 PF05277 DUF726: Protein of un 95.1 0.046 1E-06 48.1 5.6 38 165-202 221-263 (345)
216 PF01083 Cutinase: Cutinase; 95.1 0.061 1.3E-06 42.9 6.0 77 123-202 40-125 (179)
217 PLN02324 triacylglycerol lipas 95.0 0.041 9E-07 49.3 4.9 36 149-184 199-235 (415)
218 PLN02934 triacylglycerol lipas 94.9 0.041 8.9E-07 50.4 4.8 35 148-183 306-340 (515)
219 KOG1516 Carboxylesterase and r 94.8 0.18 3.8E-06 48.2 9.0 105 95-199 112-232 (545)
220 PLN03037 lipase class 3 family 94.6 0.052 1.1E-06 49.9 4.7 37 148-184 299-338 (525)
221 PLN02802 triacylglycerol lipas 94.6 0.056 1.2E-06 49.6 4.9 37 148-184 313-350 (509)
222 PF05576 Peptidase_S37: PS-10 94.6 0.062 1.3E-06 47.7 4.9 112 86-199 54-169 (448)
223 PLN02753 triacylglycerol lipas 94.4 0.061 1.3E-06 49.5 4.7 36 148-183 292-331 (531)
224 PLN02761 lipase class 3 family 94.1 0.078 1.7E-06 48.8 4.7 36 148-183 273-313 (527)
225 PF04083 Abhydro_lipase: Parti 94.0 0.11 2.5E-06 33.3 4.1 37 75-111 14-59 (63)
226 PF06441 EHN: Epoxide hydrolas 93.9 0.086 1.9E-06 38.3 3.8 34 82-115 76-112 (112)
227 PLN02719 triacylglycerol lipas 93.8 0.095 2.1E-06 48.2 4.7 36 149-184 279-318 (518)
228 COG2382 Fes Enterochelin ester 93.7 0.087 1.9E-06 44.9 4.0 107 94-200 97-213 (299)
229 PLN02847 triacylglycerol lipas 92.9 0.17 3.8E-06 47.3 4.9 21 164-184 251-271 (633)
230 KOG4569 Predicted lipase [Lipi 92.7 0.18 4E-06 44.7 4.7 37 147-184 155-191 (336)
231 TIGR03712 acc_sec_asp2 accesso 92.5 8.7 0.00019 35.5 16.2 99 82-185 274-378 (511)
232 COG4947 Uncharacterized protei 91.9 0.47 1E-05 36.9 5.3 36 165-200 102-137 (227)
233 PF09949 DUF2183: Uncharacteri 91.2 2.4 5.2E-05 30.1 8.1 87 107-194 8-97 (100)
234 KOG4540 Putative lipase essent 90.6 0.49 1.1E-05 39.9 4.6 44 152-197 264-307 (425)
235 COG5153 CVT17 Putative lipase 90.6 0.49 1.1E-05 39.9 4.6 44 152-197 264-307 (425)
236 PF06850 PHB_depo_C: PHB de-po 90.5 0.53 1.1E-05 37.5 4.6 60 288-347 134-201 (202)
237 PF08237 PE-PPE: PE-PPE domain 90.4 1.4 3E-05 36.6 7.2 64 122-185 2-69 (225)
238 PF07519 Tannase: Tannase and 90.4 1.3 2.9E-05 41.3 7.9 83 115-200 53-151 (474)
239 COG4287 PqaA PhoPQ-activated p 90.2 0.51 1.1E-05 41.4 4.6 54 289-345 330-384 (507)
240 KOG2029 Uncharacterized conser 88.7 1 2.2E-05 42.2 5.6 56 145-200 505-573 (697)
241 KOG2385 Uncharacterized conser 85.9 1.2 2.6E-05 40.9 4.4 51 152-203 434-491 (633)
242 COG1448 TyrB Aspartate/tyrosin 85.5 5.7 0.00012 35.3 8.2 85 96-197 172-263 (396)
243 KOG1283 Serine carboxypeptidas 84.8 1.6 3.5E-05 37.7 4.3 105 93-199 29-166 (414)
244 PRK12467 peptide synthase; Pro 83.8 6.7 0.00014 47.0 10.2 100 95-198 3692-3794(3956)
245 cd01714 ETF_beta The electron 82.0 7 0.00015 31.9 7.1 73 113-195 67-145 (202)
246 KOG4388 Hormone-sensitive lipa 79.2 14 0.0003 35.0 8.4 98 95-199 396-508 (880)
247 COG0529 CysC Adenylylsulfate k 77.7 23 0.0005 28.1 8.1 37 93-129 20-58 (197)
248 PF06792 UPF0261: Uncharacteri 75.9 28 0.0006 31.6 9.3 99 96-195 2-126 (403)
249 PRK02399 hypothetical protein; 75.2 42 0.00091 30.5 10.2 99 96-195 4-128 (406)
250 PF00698 Acyl_transf_1: Acyl t 72.7 2.8 6.2E-05 36.9 2.5 32 152-184 73-104 (318)
251 PF09994 DUF2235: Uncharacteri 72.4 32 0.0007 29.6 8.8 40 145-184 72-112 (277)
252 PF06309 Torsin: Torsin; Inte 72.1 24 0.00051 26.3 6.7 62 92-159 49-115 (127)
253 PF07519 Tannase: Tannase and 71.9 5.6 0.00012 37.2 4.3 59 289-347 354-426 (474)
254 smart00827 PKS_AT Acyl transfe 71.4 5.2 0.00011 34.7 3.8 30 153-183 72-101 (298)
255 PF00448 SRP54: SRP54-type pro 68.3 25 0.00055 28.5 6.9 75 111-195 72-148 (196)
256 TIGR03131 malonate_mdcH malona 68.3 6.8 0.00015 34.0 3.9 31 152-183 65-95 (295)
257 TIGR00128 fabD malonyl CoA-acy 64.0 8.5 0.00018 33.2 3.6 31 153-184 72-103 (290)
258 cd03818 GT1_ExpC_like This fam 63.9 47 0.001 30.1 8.6 37 98-136 2-38 (396)
259 cd07225 Pat_PNPLA6_PNPLA7 Pata 62.6 12 0.00026 32.7 4.3 63 109-185 2-64 (306)
260 PRK11613 folP dihydropteroate 62.0 55 0.0012 28.3 8.0 55 112-178 166-225 (282)
261 PHA02114 hypothetical protein 61.5 14 0.0003 25.8 3.4 34 96-129 83-116 (127)
262 KOG1411 Aspartate aminotransfe 60.6 24 0.00052 31.2 5.5 84 97-196 199-289 (427)
263 PRK05579 bifunctional phosphop 60.0 1.1E+02 0.0024 28.0 10.1 74 95-171 116-196 (399)
264 PF00326 Peptidase_S9: Prolyl 60.0 23 0.00049 28.8 5.3 63 94-159 143-208 (213)
265 PRK10279 hypothetical protein; 59.3 14 0.0003 32.2 4.0 33 153-186 23-55 (300)
266 PF01012 ETF: Electron transfe 58.8 84 0.0018 24.4 8.3 77 95-184 33-112 (164)
267 cd07198 Patatin Patatin-like p 58.7 17 0.00037 28.6 4.2 33 153-186 16-48 (172)
268 TIGR02764 spore_ybaN_pdaB poly 57.7 7.9 0.00017 31.1 2.2 34 96-129 152-188 (191)
269 PF03610 EIIA-man: PTS system 57.3 71 0.0015 23.1 7.2 73 97-181 2-75 (116)
270 cd07227 Pat_Fungal_NTE1 Fungal 57.0 18 0.00039 31.0 4.2 33 152-185 27-59 (269)
271 cd07207 Pat_ExoU_VipD_like Exo 56.8 19 0.0004 28.9 4.2 32 153-185 17-48 (194)
272 PRK09936 hypothetical protein; 55.6 35 0.00075 29.4 5.6 52 107-163 36-87 (296)
273 COG3673 Uncharacterized conser 55.0 1.3E+02 0.0027 26.6 8.7 92 93-184 29-142 (423)
274 COG2939 Carboxypeptidase C (ca 54.7 12 0.00027 34.6 3.0 59 288-346 425-489 (498)
275 TIGR02816 pfaB_fam PfaB family 53.9 16 0.00034 34.8 3.7 32 153-185 254-286 (538)
276 COG1752 RssA Predicted esteras 53.6 19 0.00042 31.5 4.1 32 153-185 29-60 (306)
277 TIGR02884 spore_pdaA delta-lac 53.5 14 0.00029 30.7 2.9 35 95-129 186-221 (224)
278 PF14488 DUF4434: Domain of un 53.1 42 0.0009 26.4 5.4 58 106-163 17-80 (166)
279 PF01583 APS_kinase: Adenylyls 52.9 56 0.0012 25.4 6.0 35 95-129 1-37 (156)
280 TIGR02873 spore_ylxY probable 52.8 14 0.00031 31.6 3.0 34 96-129 231-264 (268)
281 cd07210 Pat_hypo_W_succinogene 52.5 26 0.00057 29.0 4.5 31 154-185 19-49 (221)
282 TIGR00521 coaBC_dfp phosphopan 52.4 1.3E+02 0.0028 27.4 9.2 86 96-184 113-224 (390)
283 PF05576 Peptidase_S37: PS-10 51.8 17 0.00037 32.9 3.3 56 289-346 352-412 (448)
284 PRK14974 cell division protein 50.5 98 0.0021 27.6 7.9 67 119-195 219-287 (336)
285 PRK12595 bifunctional 3-deoxy- 50.0 1E+02 0.0023 27.7 8.0 76 93-174 223-299 (360)
286 PF13439 Glyco_transf_4: Glyco 49.7 52 0.0011 25.2 5.7 79 102-183 9-99 (177)
287 PF03283 PAE: Pectinacetyleste 49.4 48 0.001 29.9 5.8 48 153-200 144-196 (361)
288 cd07209 Pat_hypo_Ecoli_Z1214_l 47.9 30 0.00065 28.5 4.1 33 153-186 16-48 (215)
289 COG0541 Ffh Signal recognition 47.3 1.1E+02 0.0023 28.3 7.5 69 117-195 177-247 (451)
290 cd03016 PRX_1cys Peroxiredoxin 47.3 1.4E+02 0.003 24.3 7.9 90 95-198 26-126 (203)
291 cd07228 Pat_NTE_like_bacteria 47.2 31 0.00068 27.2 4.0 31 155-186 20-50 (175)
292 PF02230 Abhydrolase_2: Phosph 46.5 54 0.0012 26.8 5.5 57 95-159 155-214 (216)
293 cd04951 GT1_WbdM_like This fam 46.1 1.6E+02 0.0034 25.7 8.9 36 97-132 2-39 (360)
294 TIGR00689 rpiB_lacA_lacB sugar 45.5 1.4E+02 0.003 22.9 7.3 73 112-196 14-86 (144)
295 cd07211 Pat_PNPLA8 Patatin-lik 45.0 62 0.0013 28.3 5.9 17 167-183 44-60 (308)
296 COG4822 CbiK Cobalamin biosynt 45.0 1.2E+02 0.0027 24.9 6.8 60 95-169 138-199 (265)
297 TIGR01425 SRP54_euk signal rec 44.9 96 0.0021 28.7 7.1 71 115-195 175-247 (429)
298 cd07205 Pat_PNPLA6_PNPLA7_NTE1 44.7 43 0.00093 26.3 4.5 31 154-185 19-49 (175)
299 PRK05571 ribose-5-phosphate is 44.4 1.5E+02 0.0031 22.9 7.1 74 112-196 16-89 (148)
300 COG3933 Transcriptional antite 44.3 1.6E+02 0.0035 27.2 8.1 73 95-180 109-181 (470)
301 PRK08622 galactose-6-phosphate 43.2 1.6E+02 0.0035 23.2 7.2 73 112-196 16-88 (171)
302 PF10081 Abhydrolase_9: Alpha/ 43.1 42 0.00091 28.8 4.2 53 149-201 92-149 (289)
303 TIGR03709 PPK2_rel_1 polyphosp 43.0 30 0.00064 29.5 3.4 72 94-177 54-127 (264)
304 PRK00726 murG undecaprenyldiph 42.9 1.2E+02 0.0026 26.9 7.6 36 97-132 4-39 (357)
305 PF11713 Peptidase_C80: Peptid 42.8 14 0.0003 28.7 1.3 51 126-176 57-116 (157)
306 PRK06731 flhF flagellar biosyn 42.8 2.2E+02 0.0047 24.5 8.6 72 114-195 145-219 (270)
307 COG0218 Predicted GTPase [Gene 42.7 23 0.00049 28.7 2.5 54 289-346 136-197 (200)
308 PF02502 LacAB_rpiB: Ribose/Ga 42.7 1.2E+02 0.0026 23.1 6.2 73 112-196 15-87 (140)
309 TIGR01119 lacB galactose-6-pho 42.2 1.7E+02 0.0037 23.1 7.2 65 112-187 16-80 (171)
310 PRK14581 hmsF outer membrane N 41.2 45 0.00097 32.7 4.6 79 93-171 46-142 (672)
311 PRK13398 3-deoxy-7-phosphohept 40.4 2.2E+02 0.0047 24.5 8.2 95 93-196 132-232 (266)
312 KOG1200 Mitochondrial/plastidi 38.8 1.8E+02 0.004 23.7 6.8 33 97-131 15-47 (256)
313 cd07230 Pat_TGL4-5_like Triacy 38.7 23 0.0005 32.6 2.3 25 165-189 102-126 (421)
314 PRK05282 (alpha)-aspartyl dipe 38.4 65 0.0014 27.0 4.7 38 94-131 30-70 (233)
315 TIGR02883 spore_cwlD N-acetylm 38.4 84 0.0018 25.2 5.3 37 125-162 2-44 (189)
316 TIGR01120 rpiB ribose 5-phosph 38.3 1.8E+02 0.0039 22.2 7.3 73 112-196 15-87 (143)
317 COG3727 Vsr DNA G:T-mismatch r 38.2 79 0.0017 23.6 4.4 35 94-128 56-114 (150)
318 KOG2872 Uroporphyrinogen decar 37.6 1.4E+02 0.003 25.8 6.3 71 95-172 252-336 (359)
319 cd00739 DHPS DHPS subgroup of 37.5 2E+02 0.0043 24.5 7.6 59 111-178 152-212 (257)
320 cd03811 GT1_WabH_like This fam 36.5 2.7E+02 0.0059 23.7 11.1 84 97-183 2-101 (353)
321 PF10605 3HBOH: 3HB-oligomer h 36.1 26 0.00057 33.4 2.1 34 166-199 287-321 (690)
322 cd00006 PTS_IIA_man PTS_IIA, P 36.0 1.7E+02 0.0037 21.3 7.3 71 97-179 3-73 (122)
323 PF03205 MobB: Molybdopterin g 35.9 76 0.0017 24.0 4.4 41 97-137 1-43 (140)
324 cd07229 Pat_TGL3_like Triacylg 35.8 25 0.00054 31.9 2.0 37 155-192 103-139 (391)
325 TIGR01361 DAHP_synth_Bsub phos 35.7 2E+02 0.0044 24.5 7.4 73 93-174 130-206 (260)
326 cd07232 Pat_PLPL Patain-like p 35.7 23 0.0005 32.4 1.7 28 165-192 96-123 (407)
327 PRK13397 3-deoxy-7-phosphohept 35.5 2.2E+02 0.0047 24.2 7.3 41 93-133 120-160 (250)
328 COG1506 DAP2 Dipeptidyl aminop 35.4 1.1E+02 0.0025 29.9 6.5 65 92-159 548-615 (620)
329 COG0552 FtsY Signal recognitio 35.2 3.3E+02 0.0071 24.3 8.7 93 93-202 136-234 (340)
330 COG0331 FabD (acyl-carrier-pro 35.1 50 0.0011 29.0 3.6 20 164-183 85-104 (310)
331 PRK12615 galactose-6-phosphate 35.1 2.3E+02 0.0049 22.5 7.1 73 112-196 16-88 (171)
332 TIGR03707 PPK2_P_aer polyphosp 34.8 41 0.0009 28.0 3.0 71 95-177 30-102 (230)
333 PF14253 AbiH: Bacteriophage a 34.8 36 0.00079 29.0 2.8 21 156-176 227-247 (270)
334 KOG0781 Signal recognition par 34.3 1.8E+02 0.0039 27.3 6.9 74 100-183 443-517 (587)
335 PRK14457 ribosomal RNA large s 34.2 2.3E+02 0.005 25.4 7.7 76 97-179 259-334 (345)
336 PF05724 TPMT: Thiopurine S-me 34.1 64 0.0014 26.7 4.0 30 96-130 38-67 (218)
337 COG3340 PepE Peptidase E [Amin 34.0 1.9E+02 0.004 23.9 6.3 37 94-130 31-70 (224)
338 PTZ00215 ribose 5-phosphate is 33.8 2.2E+02 0.0048 22.0 7.1 73 112-196 18-92 (151)
339 cd07212 Pat_PNPLA9 Patatin-lik 33.6 36 0.00079 29.9 2.6 20 167-186 35-54 (312)
340 PF04244 DPRP: Deoxyribodipyri 33.6 1.2E+02 0.0026 25.2 5.5 48 111-169 51-98 (224)
341 TIGR03586 PseI pseudaminic aci 33.5 2.7E+02 0.0058 24.8 7.9 81 93-184 132-214 (327)
342 PF09419 PGP_phosphatase: Mito 33.4 1.5E+02 0.0033 23.3 5.7 54 117-174 35-88 (168)
343 KOG0855 Alkyl hydroperoxide re 33.0 1.2E+02 0.0026 23.8 4.8 55 75-129 71-131 (211)
344 PF08433 KTI12: Chromatin asso 32.5 1.1E+02 0.0025 26.2 5.4 38 97-134 2-41 (270)
345 cd05312 NAD_bind_1_malic_enz N 32.5 92 0.002 26.9 4.7 80 98-181 27-123 (279)
346 TIGR00959 ffh signal recogniti 32.3 2.9E+02 0.0062 25.7 8.2 71 115-195 175-247 (428)
347 cd07224 Pat_like Patatin-like 32.2 81 0.0018 26.3 4.4 35 152-186 16-51 (233)
348 cd07231 Pat_SDP1-like Sugar-De 32.0 35 0.00076 30.0 2.2 27 159-186 92-118 (323)
349 PRK07313 phosphopantothenoylcy 31.8 1.5E+02 0.0033 23.7 5.6 62 94-158 112-179 (182)
350 COG2240 PdxK Pyridoxal/pyridox 31.7 1.8E+02 0.0038 25.1 6.2 82 117-203 23-117 (281)
351 PRK06849 hypothetical protein; 31.6 3.6E+02 0.0078 24.4 8.9 61 110-172 16-85 (389)
352 PF03976 PPK2: Polyphosphate k 31.6 21 0.00045 29.8 0.7 70 95-177 30-102 (228)
353 PRK08621 galactose-6-phosphate 31.1 2.2E+02 0.0049 21.7 6.1 56 112-177 16-71 (142)
354 COG0279 GmhA Phosphoheptose is 31.1 75 0.0016 24.9 3.5 73 99-176 44-121 (176)
355 COG0482 TrmU Predicted tRNA(5- 30.6 2.4E+02 0.0052 25.3 7.0 61 95-162 4-64 (356)
356 COG0337 AroB 3-dehydroquinate 29.8 3.9E+02 0.0084 24.1 8.2 78 97-182 35-118 (360)
357 PRK06490 glutamine amidotransf 29.7 3.1E+02 0.0068 23.0 7.5 84 95-182 8-103 (239)
358 PRK09273 hypothetical protein; 29.6 3.2E+02 0.0069 22.5 7.1 78 110-197 18-95 (211)
359 cd07208 Pat_hypo_Ecoli_yjju_li 29.3 94 0.002 26.4 4.4 22 166-187 29-50 (266)
360 PF10813 DUF2733: Protein of u 29.2 25 0.00055 18.9 0.5 9 1-9 1-9 (32)
361 TIGR01118 lacA galactose-6-pho 29.1 2.6E+02 0.0057 21.3 6.3 56 112-177 16-71 (141)
362 KOG1209 1-Acyl dihydroxyaceton 28.8 1E+02 0.0022 25.5 4.1 38 93-131 4-41 (289)
363 COG1576 Uncharacterized conser 28.7 1.5E+02 0.0032 23.0 4.7 56 114-181 60-115 (155)
364 PRK10319 N-acetylmuramoyl-l-al 28.6 1.7E+02 0.0037 25.4 5.8 14 148-161 86-99 (287)
365 COG1255 Uncharacterized protei 28.5 68 0.0015 23.4 2.7 23 109-131 23-45 (129)
366 PF08484 Methyltransf_14: C-me 28.5 1.3E+02 0.0029 23.4 4.7 51 147-197 51-102 (160)
367 cd01715 ETF_alpha The electron 28.4 2.2E+02 0.0047 22.2 6.0 75 96-185 30-106 (168)
368 PRK13256 thiopurine S-methyltr 27.5 53 0.0012 27.3 2.4 28 98-130 46-73 (226)
369 TIGR02260 benz_CoA_red_B benzo 27.4 5E+02 0.011 24.0 9.1 39 95-134 266-304 (413)
370 cd07206 Pat_TGL3-4-5_SDP1 Tria 27.3 83 0.0018 27.4 3.6 25 165-189 98-122 (298)
371 PRK10867 signal recognition pa 27.3 5.1E+02 0.011 24.1 9.1 69 116-194 177-247 (433)
372 PRK02458 ribose-phosphate pyro 27.2 4.4E+02 0.0096 23.3 8.6 74 94-168 55-132 (323)
373 PF03490 Varsurf_PPLC: Variant 27.0 84 0.0018 18.9 2.5 27 143-170 5-31 (51)
374 COG0159 TrpA Tryptophan syntha 27.0 2.9E+02 0.0062 23.7 6.7 67 93-175 93-160 (265)
375 PF13207 AAA_17: AAA domain; P 26.9 1.1E+02 0.0024 21.9 3.9 71 98-170 1-77 (121)
376 COG1092 Predicted SAM-dependen 26.3 2E+02 0.0043 26.3 6.0 56 114-172 280-337 (393)
377 PRK07451 translation initiatio 26.2 2.6E+02 0.0057 20.4 5.8 64 90-163 46-109 (115)
378 PF07521 RMMBL: RNA-metabolisi 26.2 1.4E+02 0.003 17.2 3.5 32 123-169 7-38 (43)
379 TIGR02069 cyanophycinase cyano 26.2 3.3E+02 0.0071 23.1 7.0 40 92-131 25-66 (250)
380 TIGR00632 vsr DNA mismatch end 26.1 1.1E+02 0.0025 22.4 3.6 15 115-129 100-114 (117)
381 cd08769 DAP_dppA_2 Peptidase M 26.1 2.2E+02 0.0048 24.5 5.9 51 288-344 147-199 (270)
382 KOG0854 Alkyl hydroperoxide re 25.9 1.8E+02 0.004 23.0 4.8 56 96-161 34-95 (224)
383 PF03853 YjeF_N: YjeF-related 25.9 89 0.0019 24.5 3.4 36 93-128 23-58 (169)
384 cd07204 Pat_PNPLA_like Patatin 25.8 1.2E+02 0.0026 25.6 4.3 20 167-186 34-53 (243)
385 PRK13753 dihydropteroate synth 25.7 2.3E+02 0.0049 24.5 5.9 59 116-180 158-218 (279)
386 PRK11460 putative hydrolase; P 25.7 2.9E+02 0.0063 22.8 6.7 41 94-134 147-190 (232)
387 PRK03363 fixB putative electro 25.6 3.6E+02 0.0078 23.8 7.3 60 116-185 42-103 (313)
388 TIGR03569 NeuB_NnaB N-acetylne 25.4 3.4E+02 0.0074 24.2 7.1 81 93-184 131-215 (329)
389 cd08185 Fe-ADH1 Iron-containin 25.4 3.6E+02 0.0079 24.4 7.7 64 96-170 26-91 (380)
390 cd01819 Patatin_and_cPLA2 Pata 25.3 1.2E+02 0.0027 23.2 4.1 18 165-182 29-46 (155)
391 COG1856 Uncharacterized homolo 25.2 2.6E+02 0.0056 23.3 5.7 80 112-194 100-185 (275)
392 PTZ00445 p36-lilke protein; Pr 25.2 3.4E+02 0.0073 22.5 6.4 68 109-176 29-104 (219)
393 PF04084 ORC2: Origin recognit 24.9 3.6E+02 0.0077 24.0 7.2 34 144-177 117-150 (326)
394 COG1087 GalE UDP-glucose 4-epi 24.8 3.5E+02 0.0076 23.8 6.8 85 112-199 14-120 (329)
395 COG4075 Uncharacterized conser 24.8 2.5E+02 0.0055 19.7 4.8 57 110-171 15-72 (110)
396 PRK07206 hypothetical protein; 24.7 3.5E+02 0.0076 24.7 7.6 80 96-182 3-89 (416)
397 PRK11889 flhF flagellar biosyn 24.7 4.8E+02 0.01 24.2 7.9 76 110-195 307-385 (436)
398 PRK14456 ribosomal RNA large s 24.6 3.4E+02 0.0073 24.6 7.1 75 98-179 283-357 (368)
399 PF13714 PEP_mutase: Phosphoen 24.4 3.5E+02 0.0075 22.8 6.8 72 95-170 70-142 (238)
400 KOG1252 Cystathionine beta-syn 24.3 5.1E+02 0.011 23.1 7.7 38 94-132 210-249 (362)
401 PF13709 DUF4159: Domain of un 24.3 2.8E+02 0.0061 22.7 6.1 56 288-344 53-108 (207)
402 PRK07933 thymidylate kinase; V 23.8 1.6E+02 0.0035 24.1 4.7 39 98-136 2-42 (213)
403 PF01656 CbiA: CobQ/CobB/MinD/ 23.6 1E+02 0.0022 24.3 3.5 33 99-131 2-36 (195)
404 PLN02752 [acyl-carrier protein 23.6 82 0.0018 28.1 3.1 19 166-184 126-144 (343)
405 PF03033 Glyco_transf_28: Glyc 23.5 56 0.0012 24.2 1.8 34 98-131 2-35 (139)
406 PLN02695 GDP-D-mannose-3',5'-e 23.5 4.2E+02 0.0092 23.8 7.7 35 95-132 21-55 (370)
407 TIGR02363 dhaK1 dihydroxyaceto 23.4 1.7E+02 0.0037 26.0 4.8 36 93-128 251-291 (329)
408 cd07218 Pat_iPLA2 Calcium-inde 23.2 1.4E+02 0.003 25.2 4.2 20 167-186 33-52 (245)
409 PRK03092 ribose-phosphate pyro 22.8 5.2E+02 0.011 22.6 8.9 71 93-163 34-108 (304)
410 PF01075 Glyco_transf_9: Glyco 22.5 1.1E+02 0.0024 25.4 3.6 37 93-129 103-144 (247)
411 PF05577 Peptidase_S28: Serine 22.5 53 0.0011 30.4 1.7 40 289-331 377-416 (434)
412 cd00423 Pterin_binding Pterin 22.5 1.3E+02 0.0029 25.5 4.1 24 111-135 152-177 (258)
413 TIGR02813 omega_3_PfaA polyket 22.4 84 0.0018 36.4 3.4 31 152-183 663-693 (2582)
414 TIGR02362 dhaK1b probable dihy 22.4 1.8E+02 0.0038 25.8 4.7 35 93-127 247-286 (326)
415 PRK11468 dihydroxyacetone kina 22.2 1.9E+02 0.0041 26.0 4.9 35 94-128 275-314 (356)
416 KOG0780 Signal recognition par 22.1 4.9E+02 0.011 23.9 7.3 39 116-163 177-215 (483)
417 COG1225 Bcp Peroxiredoxin [Pos 22.1 3.3E+02 0.0071 21.2 5.7 54 75-129 12-71 (157)
418 cd03146 GAT1_Peptidase_E Type 21.9 4.4E+02 0.0096 21.5 7.4 85 93-180 29-129 (212)
419 cd03785 GT1_MurG MurG is an N- 21.8 4.7E+02 0.01 22.9 7.7 32 99-130 2-35 (350)
420 PRK14481 dihydroxyacetone kina 21.7 1.9E+02 0.0041 25.7 4.8 36 93-128 250-290 (331)
421 COG5441 Uncharacterized conser 21.7 5.5E+02 0.012 22.5 8.1 98 97-194 3-123 (401)
422 PRK14483 DhaKLM operon coactiv 21.7 1.8E+02 0.0039 25.8 4.7 36 93-128 250-290 (329)
423 PF12242 Eno-Rase_NADH_b: NAD( 21.4 2.1E+02 0.0045 19.2 3.8 38 147-185 20-61 (78)
424 TIGR03702 lip_kinase_YegS lipi 21.3 3.3E+02 0.0071 23.5 6.4 32 97-128 2-33 (293)
425 PRK08762 molybdopterin biosynt 21.3 6.2E+02 0.013 22.9 9.7 37 159-199 132-169 (376)
426 COG0859 RfaF ADP-heptose:LPS h 21.1 1.6E+02 0.0035 26.1 4.4 35 95-129 175-215 (334)
427 TIGR03708 poly_P_AMP_trns poly 20.7 3.1E+02 0.0066 26.0 6.2 73 94-178 38-112 (493)
428 PRK08105 flavodoxin; Provision 20.7 2.5E+02 0.0054 21.5 4.9 57 102-163 59-117 (149)
429 cd07217 Pat17_PNPLA8_PNPLA9_li 20.7 91 0.002 27.9 2.8 18 167-184 44-61 (344)
430 cd08551 Fe-ADH iron-containing 20.6 5.5E+02 0.012 23.1 7.9 34 96-129 24-58 (370)
431 TIGR02638 lactal_redase lactal 20.6 5.4E+02 0.012 23.3 7.8 58 96-163 30-88 (379)
432 cd06542 GH18_EndoS-like Endo-b 20.6 5.1E+02 0.011 21.7 7.3 55 109-163 51-106 (255)
433 KOG1202 Animal-type fatty acid 20.5 1.8E+02 0.004 30.9 4.9 29 147-176 566-594 (2376)
434 KOG2170 ATPase of the AAA+ sup 20.3 1.2E+02 0.0027 26.5 3.2 32 91-122 105-138 (344)
435 TIGR00064 ftsY signal recognit 20.2 5.6E+02 0.012 22.0 8.9 69 117-195 149-225 (272)
436 PRK00771 signal recognition pa 20.1 7.2E+02 0.016 23.2 9.5 37 94-130 93-131 (437)
437 COG3887 Predicted signaling pr 20.0 2.8E+02 0.006 26.9 5.6 100 95-198 258-377 (655)
No 1
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=6.9e-36 Score=254.98 Aligned_cols=246 Identities=37% Similarity=0.680 Sum_probs=165.4
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHH
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (348)
+|||+||++.+.+.|..+++.|.+.||+|+++|+||||.|+.+....++++++++++.++++.++..++++|+||||||.
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 59999999999999999999997778999999999999997654456789999999999999998634999999999999
Q ss_pred HHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccCCC
Q 018930 177 CVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSP 256 (348)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (348)
+++.+|.++|++|+++|++++.....+......+........ .... ........................++....
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTE---KIWD-YTFGEGPDKPPTGIMMKPEFVRHYYYNQSP 160 (255)
T ss_pred HHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccc---ccee-eeeccCCCCCcchhhcCHHHHHHHHhcCCC
Confidence 999999999999999999998643222211111111000000 0000 000000000110001111122222222222
Q ss_pred hHHHHHHHHhcCCCCCCcccccccCC-cCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccChH
Q 018930 257 SKDVALAMASMRPTPLGPIMEKLSLS-PEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKPQ 335 (348)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 335 (348)
..........+............... ....+++|+++|+|++|.++|++..+.+.+.+|++++++++++||++++|+|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~ 240 (255)
T PLN02965 161 LEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPT 240 (255)
T ss_pred HHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHH
Confidence 22122222222221111111100000 11234699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 018930 336 SLHKILVEIAQ 346 (348)
Q Consensus 336 ~~~~~i~~fl~ 346 (348)
+|++.|.+|++
T Consensus 241 ~v~~~l~~~~~ 251 (255)
T PLN02965 241 TLFQYLLQAVS 251 (255)
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 2
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=2.9e-34 Score=246.30 Aligned_cols=263 Identities=39% Similarity=0.670 Sum_probs=179.4
Q ss_pred CCeeeeeeecCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc
Q 018930 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (348)
Q Consensus 82 ~g~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (348)
+|..+++...++++|+|||+||++.+.+.|.+++..|.+.||+|+++|+||||.|.......++++++++++.++++++.
T Consensus 5 ~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~ 84 (273)
T PLN02211 5 NGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP 84 (273)
T ss_pred cccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC
Confidence 56666666656778999999999999999999999999889999999999999885444445799999999999999985
Q ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchh
Q 018930 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFM 241 (348)
Q Consensus 162 ~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (348)
..++++||||||||.+++.++.++|++|+++|++++.....+................+...... ..............
T Consensus 85 ~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 163 (273)
T PLN02211 85 ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYEL-GFGLGPDQPPTSAI 163 (273)
T ss_pred CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceee-eeccCCCCCCceee
Confidence 33499999999999999999999999999999998865433322221111111000000000000 00000000011111
Q ss_pred hHHHhhhhhhccCCChHHHHHHHHhcCCCCCCccccccc-CCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEE
Q 018930 242 FEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLS-LSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVY 320 (348)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~ 320 (348)
...+.....++...+..............+...+..... .....+.++|+++|.|++|..+|++.++.+.+.+++.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~ 243 (273)
T PLN02211 164 IKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVY 243 (273)
T ss_pred eCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEE
Confidence 122333344455554444443333333333222222111 0112334689999999999999999999999999999999
Q ss_pred EecCCCCCCCccChHHHHHHHHHHhc
Q 018930 321 KIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 321 ~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
.++ +||.+++++|+++++.|.++..
T Consensus 244 ~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 244 ELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred EEC-CCCCccccCHHHHHHHHHHHHH
Confidence 997 8999999999999999998864
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.9e-34 Score=251.43 Aligned_cols=252 Identities=15% Similarity=0.174 Sum_probs=167.8
Q ss_pred CCeeeeeeecCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC------CCCCChHhhhHHHHH
Q 018930 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT------NSVTTLAEYSKPLLD 155 (348)
Q Consensus 82 ~g~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~l~~ 155 (348)
+|.+++|...+.++++|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+. ...++++++++++.+
T Consensus 16 ~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~ 94 (294)
T PLN02824 16 KGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLND 94 (294)
T ss_pred cCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHH
Confidence 5677776665545689999999999999999999999986 899999999999997532 235899999999999
Q ss_pred HHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCC----h-hhH---HHHhhcchh---hhhhh-
Q 018930 156 YLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR----P-FDV---FAEELGSAE---RFMQE- 223 (348)
Q Consensus 156 ~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~----~-~~~---~~~~~~~~~---~~~~~- 223 (348)
++++++.+ +++|+||||||.+++.+|.++|++|+++|++++........ . ... +........ .+...
T Consensus 95 ~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (294)
T PLN02824 95 FCSDVVGD-PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSV 173 (294)
T ss_pred HHHHhcCC-CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhh
Confidence 99999986 99999999999999999999999999999999864221100 0 000 011000000 00000
Q ss_pred -----hhhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCC---CCcccccccCCcCccCCcceEEEE
Q 018930 224 -----SQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTP---LGPIMEKLSLSPEKYGTGRRFFIQ 295 (348)
Q Consensus 224 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Pvl~i~ 295 (348)
....+....... .....+....+................+.... ....+.+ .++|+++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------i~~P~lvi~ 241 (294)
T PLN02824 174 ATPETVKNILCQCYHDD----SAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPA--------VKCPVLIAW 241 (294)
T ss_pred cCHHHHHHHHHHhccCh----hhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhh--------cCCCeEEEE
Confidence 000000000000 00011111111110001111111111110000 0111222 359999999
Q ss_pred eCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 296 TLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 296 G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
|++|.++|.+..+.+.+..+++++++++++||++++|+|++|++.|.+|++.
T Consensus 242 G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 242 GEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9999999999998888888889999999999999999999999999999975
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=5.8e-34 Score=246.07 Aligned_cols=250 Identities=15% Similarity=0.123 Sum_probs=165.3
Q ss_pred cCCeeeeeeec-CC-CCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHH
Q 018930 81 SNGKQDTNILE-NI-QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLE 158 (348)
Q Consensus 81 ~~g~~~~~~~~-~~-~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 158 (348)
.+|.+++|... ++ ++++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+ ...++++++++++.++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~~~~~~i~ 86 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTP-RHPYRFPGLAKLAARMLD 86 (276)
T ss_pred cCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCC-CCcCcHHHHHHHHHHHHH
Confidence 36667777552 23 457999999999999999999999987 599999999999999753 446789999999999999
Q ss_pred hhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhh---h--hhhhcCCC
Q 018930 159 NLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQES---Q--FLIYGNGK 233 (348)
Q Consensus 159 ~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~ 233 (348)
+++++ +++||||||||.+++.+|.++|++|+++|+++++.....................+.... . ........
T Consensus 87 ~l~~~-~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (276)
T TIGR02240 87 YLDYG-QVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAF 165 (276)
T ss_pred HhCcC-ceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhcccee
Confidence 99987 999999999999999999999999999999998754221110000000000000000000 0 00000000
Q ss_pred CCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHh
Q 018930 234 DKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRE 313 (348)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~ 313 (348)
...+. ... ...................... .......+. .+++|+++|+|++|.++|++..+.+.+.
T Consensus 166 ~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~--------~i~~P~lii~G~~D~~v~~~~~~~l~~~ 232 (276)
T TIGR02240 166 RRDPE---LAM-AHASKVRSGGKLGYYWQLFAGL-GWTSIHWLH--------KIQQPTLVLAGDDDPIIPLINMRLLAWR 232 (276)
T ss_pred eccch---hhh-hhhhhcccCCCchHHHHHHHHc-CCchhhHhh--------cCCCCEEEEEeCCCCcCCHHHHHHHHHh
Confidence 00000 000 0000000000000000000000 000011122 2359999999999999999999999999
Q ss_pred CCCCcEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 314 NPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 314 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
+++++++++++ ||++++|+|+++++.|.+|++.
T Consensus 233 ~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 233 IPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred CCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 99999999985 9999999999999999999863
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.6e-33 Score=243.00 Aligned_cols=264 Identities=16% Similarity=0.101 Sum_probs=166.2
Q ss_pred eeeecccCCe--eeeeeec-CCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHhhh
Q 018930 75 TLSESLSNGK--QDTNILE-NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYS 150 (348)
Q Consensus 75 ~~~~~~~~g~--~~~~~~~-~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~ 150 (348)
.+..+..+|. +++|... ++++|+|||+||++++...|..+++.|.+.||+|+++|+||||.|+.+.. ..+++++++
T Consensus 23 ~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 102 (302)
T PRK00870 23 YVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHV 102 (302)
T ss_pred eEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHH
Confidence 3444444444 4555443 33578999999999999999999999988799999999999999975432 457999999
Q ss_pred HHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhh-hhhhhhhh
Q 018930 151 KPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFM-QESQFLIY 229 (348)
Q Consensus 151 ~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 229 (348)
+++.+++++++.+ +++|+||||||.+|+.+|.++|++|.++|++++............+........... ........
T Consensus 103 ~~l~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (302)
T PRK00870 103 EWMRSWFEQLDLT-DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVN 181 (302)
T ss_pred HHHHHHHHHcCCC-CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhh
Confidence 9999999999987 999999999999999999999999999999987533221100011110000000000 00000000
Q ss_pred cCCCCCCCCchhhHHHhhhhhhccCCChHHHHH---HHHhcCCCCC---CcccccccCCcCccCCcceEEEEeCCCCCCC
Q 018930 230 GNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVAL---AMASMRPTPL---GPIMEKLSLSPEKYGTGRRFFIQTLDDRALS 303 (348)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp 303 (348)
..... ....+.... +........... ....+..... ...............++|+++|+|++|.++|
T Consensus 182 ~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 254 (302)
T PRK00870 182 GGTVR------DLSDAVRAA-YDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITG 254 (302)
T ss_pred ccccc------cCCHHHHHH-hhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCccc
Confidence 00000 000011111 000000000000 0000000000 0000000000112235999999999999999
Q ss_pred HHHHHHHHHhCCCCc---EEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 304 PDVQEKLVRENPPEG---VYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 304 ~~~~~~~~~~~~~~~---~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
... +.+.+.+++.+ +++++++||++++|+|++|++.|.+|++.
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 255 GGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred Cch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 876 88889898876 88999999999999999999999999964
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6e-33 Score=247.63 Aligned_cols=251 Identities=16% Similarity=0.218 Sum_probs=160.7
Q ss_pred CCe-eeeeeecC-C----CCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHH
Q 018930 82 NGK-QDTNILEN-I----QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLD 155 (348)
Q Consensus 82 ~g~-~~~~~~~~-~----~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ 155 (348)
+|. +++|...+ + .+|+|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+....++++++++++.+
T Consensus 69 ~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~ 147 (360)
T PLN02679 69 KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILD 147 (360)
T ss_pred CCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHH
Confidence 344 66665433 2 358999999999999999999999987 6999999999999997654456799999999999
Q ss_pred HHHhhcCCCcEEEEEECHHHHHHHHHHH-hCCcccceEEEecccccCCCCChhh-HHHHhh-c-------------chhh
Q 018930 156 YLENLLEDEKVILVGHSSGGACVSYALE-HFPQKISKAIFLCATMVSDGQRPFD-VFAEEL-G-------------SAER 219 (348)
Q Consensus 156 ~l~~l~~~~~v~lvGhS~Gg~~a~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~-~-------------~~~~ 219 (348)
++++++.+ +++|+||||||.+++.++. .+|++|+++|++++........... ...... . ....
T Consensus 148 ~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (360)
T PLN02679 148 FLEEVVQK-PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASA 226 (360)
T ss_pred HHHHhcCC-CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHH
Confidence 99999987 9999999999999998886 4799999999999864321111000 000000 0 0000
Q ss_pred hhhh------hhhhhhcCCCCCCCCchhhHHHhhh---hhhccCCChHHHHHHHHhc-CCCCCCcccccccCCcCccCCc
Q 018930 220 FMQE------SQFLIYGNGKDKPPTGFMFEKQQMK---GLYFNQSPSKDVALAMASM-RPTPLGPIMEKLSLSPEKYGTG 289 (348)
Q Consensus 220 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 289 (348)
+... ....+...... ... ...+... ....... ........... ...+....+. .+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~--------~i~~ 293 (360)
T PLN02679 227 LFNRVKQRDNLKNILLSVYGN--KEA--VDDELVEIIRGPADDEG-ALDAFVSIVTGPPGPNPIKLIP--------RISL 293 (360)
T ss_pred HHHHhcCHHHHHHHHHHhccC--ccc--CCHHHHHHHHhhccCCC-hHHHHHHHHhcCCCCCHHHHhh--------hcCC
Confidence 0000 00000000000 000 0001100 0000000 00000000000 0001111112 2359
Q ss_pred ceEEEEeCCCCCCCHHH-----HHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 290 RRFFIQTLDDRALSPDV-----QEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 290 Pvl~i~G~~D~~vp~~~-----~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
|+|+|+|++|.++|++. .+.+.+.+|++++++++++||++++|+|++|++.|.+||+.
T Consensus 294 PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 294 PILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 99999999999998763 34566778999999999999999999999999999999963
No 7
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2e-32 Score=237.48 Aligned_cols=255 Identities=15% Similarity=0.158 Sum_probs=157.2
Q ss_pred CeeeeeeecCCCCceEEEecCCCCCcccHHH---HHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh
Q 018930 83 GKQDTNILENIQYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (348)
Q Consensus 83 g~~~~~~~~~~~~~~vvllHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (348)
+..++|... +++|+|||+||++.+...|.. .+..|.+.||+|+++|+||||.|+...........+++++.++++.
T Consensus 19 ~~~~~y~~~-g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 97 (282)
T TIGR03343 19 NFRIHYNEA-GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA 97 (282)
T ss_pred ceeEEEEec-CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHH
Confidence 445555543 467899999999998888864 3556766789999999999999975432222222578999999999
Q ss_pred hcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCC---ChhhHHHHhhcchh-hhhhhhhhhhhcCCCCC
Q 018930 160 LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQ---RPFDVFAEELGSAE-RFMQESQFLIYGNGKDK 235 (348)
Q Consensus 160 l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 235 (348)
++.+ +++++||||||.+++.+|.++|++|+++|++++....... .............. ................
T Consensus 98 l~~~-~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (282)
T TIGR03343 98 LDIE-KAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFD- 175 (282)
T ss_pred cCCC-CeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccC-
Confidence 9997 9999999999999999999999999999999975321110 00000000000000 0000000000000000
Q ss_pred CCCchhhHHHhhhhhhc-cCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC
Q 018930 236 PPTGFMFEKQQMKGLYF-NQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN 314 (348)
Q Consensus 236 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~ 314 (348)
... ........... ...................... .. . ......+++|+|+|+|++|.++|++..+.+.+.+
T Consensus 176 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~ 249 (282)
T TIGR03343 176 QSL---ITEELLQGRWENIQRQPEHLKNFLISSQKAPLST-WD-V-TARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM 249 (282)
T ss_pred ccc---CcHHHHHhHHHHhhcCHHHHHHHHHhcccccccc-ch-H-HHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhC
Confidence 000 00000000000 0000011001111100000000 00 0 0011223599999999999999999999999999
Q ss_pred CCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 315 PPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 315 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
|++++++++++||++++|+|++|++.|.+|++
T Consensus 250 ~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 250 PDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999986
No 8
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.4e-32 Score=236.60 Aligned_cols=258 Identities=14% Similarity=0.184 Sum_probs=162.9
Q ss_pred CCeeeeeeecCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc
Q 018930 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (348)
Q Consensus 82 ~g~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (348)
+|.+++|...+ ++++|||+||++.+...|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.+++++++
T Consensus 22 ~~~~i~y~~~G-~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (286)
T PRK03204 22 SRGRIHYIDEG-TGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLG 99 (286)
T ss_pred CCcEEEEEECC-CCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhC
Confidence 45566655433 568999999999988999999999987 5999999999999997655446789999999999999999
Q ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcc---hhhhhhhhhhhhhcCCCCCCCC
Q 018930 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGS---AERFMQESQFLIYGNGKDKPPT 238 (348)
Q Consensus 162 ~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 238 (348)
.+ +++++||||||.+++.++..+|++|+++|++++............+...... ...+.. ...............
T Consensus 100 ~~-~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 177 (286)
T PRK03204 100 LD-RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILR-RNFFVERLIPAGTEH 177 (286)
T ss_pred CC-CEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhh-hhHHHHHhccccccC
Confidence 86 9999999999999999999999999999998875422111011111110000 000000 000000000000000
Q ss_pred chhhHHHhhhhhhccCCChHHHHHHHHhcC--CCCCCcccccccC-CcCccCCcceEEEEeCCCCCCCH-HHHHHHHHhC
Q 018930 239 GFMFEKQQMKGLYFNQSPSKDVALAMASMR--PTPLGPIMEKLSL-SPEKYGTGRRFFIQTLDDRALSP-DVQEKLVREN 314 (348)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~Pvl~i~G~~D~~vp~-~~~~~~~~~~ 314 (348)
.........+ ...............+. ..........+.. ......++|+++|+|++|.++++ ...+.+.+.+
T Consensus 178 --~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~i 254 (286)
T PRK03204 178 --RPSSAVMAHY-RAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATF 254 (286)
T ss_pred --CCCHHHHHHh-cCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhc
Confidence 0001111111 11100000011000000 0000001111100 00011259999999999998865 4578899999
Q ss_pred CCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 315 PPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 315 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
|+.++++++++||++++|+|+++++.|.+|+.
T Consensus 255 p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 255 PDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred CCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999973
No 9
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.4e-32 Score=237.35 Aligned_cols=259 Identities=15% Similarity=0.119 Sum_probs=160.9
Q ss_pred cCCeeeeeeecCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh
Q 018930 81 SNGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL 160 (348)
Q Consensus 81 ~~g~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l 160 (348)
.+|..++|...+ ++++|||+||++++...|..+++.|.+. ++|+++|+||||.|+.+. ..++++++++++.++++++
T Consensus 14 ~~g~~i~y~~~G-~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~-~~~~~~~~a~dl~~ll~~l 90 (295)
T PRK03592 14 VLGSRMAYIETG-EGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD-IDYTFADHARYLDAWFDAL 90 (295)
T ss_pred ECCEEEEEEEeC-CCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh
Confidence 366777765543 5689999999999999999999999997 699999999999997643 4579999999999999999
Q ss_pred cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCC-hhhHHHHhhcchh------hhhhhhhhhhhcCCC
Q 018930 161 LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR-PFDVFAEELGSAE------RFMQESQFLIYGNGK 233 (348)
Q Consensus 161 ~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 233 (348)
+.+ +++++||||||.+|+.+|.++|++|+++|++++........ ............. ...............
T Consensus 91 ~~~-~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (295)
T PRK03592 91 GLD-DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLP 169 (295)
T ss_pred CCC-CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhccc
Confidence 986 99999999999999999999999999999999843221100 0000000000000 000000000000000
Q ss_pred CCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCC----cc---cccccCCcCccCCcceEEEEeCCCCCCCHH-
Q 018930 234 DKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLG----PI---MEKLSLSPEKYGTGRRFFIQTLDDRALSPD- 305 (348)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~- 305 (348)
..... .+..+.+..+.................+..... .. ..... .....+++|+|+|+|++|.++++.
T Consensus 170 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lii~G~~D~~~~~~~ 246 (295)
T PRK03592 170 GSILR--PLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYA-QWLATSDVPKLLINAEPGAILTTGA 246 (295)
T ss_pred Ccccc--cCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhH-HHhccCCCCeEEEeccCCcccCcHH
Confidence 00000 000111100000000000000000000000000 00 00000 001223699999999999999544
Q ss_pred HHHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 306 VQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 306 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
..+.+.+..+++++++++++||++++|+|+++++.|.+|++
T Consensus 247 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~ 287 (295)
T PRK03592 247 IRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLR 287 (295)
T ss_pred HHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHH
Confidence 44444556788999999999999999999999999999986
No 10
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=3.1e-32 Score=232.83 Aligned_cols=234 Identities=19% Similarity=0.240 Sum_probs=149.8
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHH
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (348)
.|+|||+||++++...|..+++.|.+. |+|+++|+||||.|+.. ..++++++++++.+ +..+ +++|||||||
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l~~----~~~~-~~~lvGhS~G 84 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGF--GALSLADMAEAVLQ----QAPD-KAIWLGWSLG 84 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCC--CCCCHHHHHHHHHh----cCCC-CeEEEEECHH
Confidence 357999999999999999999999885 99999999999999753 34677777776553 4555 9999999999
Q ss_pred HHHHHHHHHhCCcccceEEEecccccCCCCCh----h-hHHHHhhcchhh-hhhhhhhhhhcCCCCCCCCchhhHHHhhh
Q 018930 175 GACVSYALEHFPQKISKAIFLCATMVSDGQRP----F-DVFAEELGSAER-FMQESQFLIYGNGKDKPPTGFMFEKQQMK 248 (348)
Q Consensus 175 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (348)
|.+|+.+|.++|++|+++|++++.+....... . ............ +......++.... ..... .......+.
T Consensus 85 g~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~ 162 (256)
T PRK10349 85 GLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT-MGTET-ARQDARALK 162 (256)
T ss_pred HHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH-ccCch-HHHHHHHHH
Confidence 99999999999999999999988543211100 0 000000000000 0000000000000 00000 000000011
Q ss_pred hhhccCC-ChH-HHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCC
Q 018930 249 GLYFNQS-PSK-DVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSD 326 (348)
Q Consensus 249 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~g 326 (348)
....... ... ............+....+..+ ++|+++|+|++|.++|.+..+.+.+.++++++++++++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--------~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~g 234 (256)
T PRK10349 163 KTVLALPMPEVDVLNGGLEILKTVDLRQPLQNV--------SMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAA 234 (256)
T ss_pred HHhhccCCCcHHHHHHHHHHHHhCccHHHHhhc--------CCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCC
Confidence 1111110 100 111111111112222222333 499999999999999999999999999999999999999
Q ss_pred CCCCccChHHHHHHHHHHhc
Q 018930 327 HCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 327 H~~~~e~p~~~~~~i~~fl~ 346 (348)
|++++|+|++|++.|.+|-+
T Consensus 235 H~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 235 HAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCccccCHHHHHHHHHHHhc
Confidence 99999999999999999864
No 11
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=5.6e-32 Score=225.48 Aligned_cols=259 Identities=17% Similarity=0.131 Sum_probs=170.0
Q ss_pred cccCCeeeeeee-cCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHhhhHHHHHH
Q 018930 79 SLSNGKQDTNIL-ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDY 156 (348)
Q Consensus 79 ~~~~g~~~~~~~-~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~ 156 (348)
-..+|..+++.. +.+++|.|+++||++.....|+.++..|+.+||+|+++|+||+|.|+.+.. ..|++..++.|+..+
T Consensus 27 ~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~l 106 (322)
T KOG4178|consen 27 VTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVAL 106 (322)
T ss_pred EEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHH
Confidence 334555555443 556799999999999999999999999999999999999999999998776 889999999999999
Q ss_pred HHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhh------------cchhhh----
Q 018930 157 LENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEEL------------GSAERF---- 220 (348)
Q Consensus 157 l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~------------~~~~~~---- 220 (348)
|++++.+ +++++||+||+.+|..+|..+|++|+++|.++.+.........+...... ...+..
T Consensus 107 ld~Lg~~-k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~ 185 (322)
T KOG4178|consen 107 LDHLGLK-KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKD 185 (322)
T ss_pred HHHhccc-eeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccc
Confidence 9999986 99999999999999999999999999999999876632222221111100 000000
Q ss_pred -hhhhhhhhhcCCCC---------CCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCccccccc---CCcCccC
Q 018930 221 -MQESQFLIYGNGKD---------KPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLS---LSPEKYG 287 (348)
Q Consensus 221 -~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 287 (348)
.......+...... ..+..+ +..+.+.-+.... ....... +.++...+..-. .-.....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w-~t~edi~~~~~~f-~~~g~~g------plNyyrn~~r~w~a~~~~~~~i 257 (322)
T KOG4178|consen 186 DTEMLVKTFRTRKTPGPLIVPKQPNENPLW-LTEEDIAFYVSKF-QIDGFTG------PLNYYRNFRRNWEAAPWALAKI 257 (322)
T ss_pred hhHHhHHhhhccccCCccccCCCCCCccch-hhHHHHHHHHhcc-ccccccc------cchhhHHHhhCchhcccccccc
Confidence 00000001000000 000000 1111111110000 0000000 000000000000 1111223
Q ss_pred CcceEEEEeCCCCCCCHH-HHHHHHHhCCCC-cEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 288 TGRRFFIQTLDDRALSPD-VQEKLVRENPPE-GVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~-~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
.+|+++|+|+.|.+.+.. ..+.+.+.+|+. +.++++|+||+++.|+|+++++.|.+|++
T Consensus 258 ~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~ 318 (322)
T KOG4178|consen 258 TIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFIN 318 (322)
T ss_pred ccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHH
Confidence 589999999999999866 445556666776 78899999999999999999999999986
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.3e-31 Score=231.80 Aligned_cols=252 Identities=17% Similarity=0.136 Sum_probs=166.5
Q ss_pred cCCeeeeeeecC-CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh
Q 018930 81 SNGKQDTNILEN-IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (348)
Q Consensus 81 ~~g~~~~~~~~~-~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (348)
.++..+++...+ .++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.+++++
T Consensus 13 ~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~ 91 (278)
T TIGR03056 13 VGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA 91 (278)
T ss_pred ECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH
Confidence 366677665443 3578999999999999999999999987 59999999999999976555568999999999999999
Q ss_pred hcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCC---hhhHHHHhhc---chhhhhhh-------hhh
Q 018930 160 LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR---PFDVFAEELG---SAERFMQE-------SQF 226 (348)
Q Consensus 160 l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~-------~~~ 226 (348)
++.+ +++|+||||||.+++.+|.++|++++++|++++........ .......... ........ ...
T Consensus 92 ~~~~-~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (278)
T TIGR03056 92 EGLS-PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVER 170 (278)
T ss_pred cCCC-CceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhH
Confidence 9886 99999999999999999999999999999998754321100 0000000000 00000000 000
Q ss_pred hhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHH
Q 018930 227 LIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDV 306 (348)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~ 306 (348)
........ .. ......+...... ...................... ...+++|+++|+|++|.++|++.
T Consensus 171 ~~~~~~~~--~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~P~lii~g~~D~~vp~~~ 238 (278)
T TIGR03056 171 LIRDTGSL--LD--KAGMTYYGRLIRS---PAHVDGALSMMAQWDLAPLNRD-----LPRITIPLHLIAGEEDKAVPPDE 238 (278)
T ss_pred Hhhccccc--cc--cchhhHHHHhhcC---chhhhHHHHHhhcccccchhhh-----cccCCCCEEEEEeCCCcccCHHH
Confidence 00000000 00 0000000000000 0000001111111111111111 11235899999999999999999
Q ss_pred HHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 307 QEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 307 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
.+.+.+.+++.++++++++||++++|+|+++++.|.+|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 239 SKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999985
No 13
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.3e-31 Score=228.75 Aligned_cols=242 Identities=14% Similarity=0.214 Sum_probs=161.4
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
.++|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|+.+....++++++++++.++++.++.+ +++++|||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~G~S 88 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE-RFHFVGHA 88 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC-cEEEEEec
Confidence 3578999999999999999999998887 699999999999999765566689999999999999999987 99999999
Q ss_pred HHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcch-----hhhhhhhhhhhhcCCCCCCCCchhhHHHhh
Q 018930 173 SGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSA-----ERFMQESQFLIYGNGKDKPPTGFMFEKQQM 247 (348)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (348)
|||.+++.+|.++|++|+++|++++....... ....+....... ..+................. .........
T Consensus 89 ~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 166 (257)
T TIGR03611 89 LGGLIGLQLALRYPERLLSLVLINAWSRPDPH-TRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISEN-AARLAADEA 166 (257)
T ss_pred hhHHHHHHHHHHChHHhHHheeecCCCCCChh-HHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhcc-chhhhhhhh
Confidence 99999999999999999999999875443211 100010000000 00000000000000000000 000000000
Q ss_pred hhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCC
Q 018930 248 KGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDH 327 (348)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH 327 (348)
.. ................+...+....+.. .++|+++++|++|.++|++..+.+.+.+++.+++.++++||
T Consensus 167 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 237 (257)
T TIGR03611 167 HA-LAHFPGKANVLRRINALEAFDVSARLDR--------IQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGH 237 (257)
T ss_pred hc-ccccCccHHHHHHHHHHHcCCcHHHhcc--------cCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCC
Confidence 00 0000000111111111111111111222 25899999999999999999999999999999999999999
Q ss_pred CCCccChHHHHHHHHHHhcC
Q 018930 328 CPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 328 ~~~~e~p~~~~~~i~~fl~~ 347 (348)
++++++|+++++.|.+||+.
T Consensus 238 ~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 238 ASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CccccCHHHHHHHHHHHhcC
Confidence 99999999999999999863
No 14
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.7e-31 Score=228.11 Aligned_cols=237 Identities=16% Similarity=0.130 Sum_probs=157.3
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
.++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|... ..++++++++|+.+++++++.+ +++|+|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~--~~~~~~~~~~d~~~~l~~l~~~-~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRD--PVMNYPAMAQDLLDTLDALQIE-KATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCC--CCCCHHHHHHHHHHHHHHcCCC-ceEEEEEC
Confidence 4578999999999999999999999987 599999999999999753 3479999999999999999987 89999999
Q ss_pred HHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhh--hhhh--hhhhhhcCCCCCCCCchhhHHHhhh
Q 018930 173 SGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAER--FMQE--SQFLIYGNGKDKPPTGFMFEKQQMK 248 (348)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (348)
|||.+++.+|.++|++|+++|++++.+.................... .... ......... .. . .......
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~-~~~~~~~ 163 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHL----NE-E-GVIQFLL 163 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhc----CC-H-HHHHHHH
Confidence 99999999999999999999999864332211000000000000000 0000 000000000 00 0 0000000
Q ss_pred hhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCC
Q 018930 249 GLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHC 328 (348)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~ 328 (348)
..+...............+......... ...++|+|+|+|++|..++.+..+.+.+.++++++++++++||+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 235 (255)
T PRK10673 164 KSFVDGEWRFNVPVLWDQYPHIVGWEKI--------PAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHW 235 (255)
T ss_pred hcCCcceeEeeHHHHHHhHHHHhCCccc--------CCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCe
Confidence 0000000000000000000000000011 12258999999999999999999999999999999999999999
Q ss_pred CCccChHHHHHHHHHHhcC
Q 018930 329 PFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 329 ~~~e~p~~~~~~i~~fl~~ 347 (348)
+++++|+++++.|.+|++.
T Consensus 236 ~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 236 VHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred eeccCHHHHHHHHHHHHhc
Confidence 9999999999999999975
No 15
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=7.9e-31 Score=232.95 Aligned_cols=259 Identities=19% Similarity=0.138 Sum_probs=166.0
Q ss_pred cCCeeeeeeec-CCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC---CCCChHhhhHHHHHH
Q 018930 81 SNGKQDTNILE-NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN---SVTTLAEYSKPLLDY 156 (348)
Q Consensus 81 ~~g~~~~~~~~-~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~l~~~ 156 (348)
.+|..++|... +.++++|||+||++.+...|..+++.|.+ +|+|+++|+||||.|+.+.. ..++++++++++.++
T Consensus 112 ~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~ 190 (383)
T PLN03084 112 SDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESL 190 (383)
T ss_pred CCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHH
Confidence 45555655443 34578999999999999999999999987 69999999999999976443 257999999999999
Q ss_pred HHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcch-hhhhh-----hhhhhhhc
Q 018930 157 LENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSA-ERFMQ-----ESQFLIYG 230 (348)
Q Consensus 157 l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~ 230 (348)
+++++++ +++|+|||+||.+++.+|.++|++|+++|++++............+....... ..+.. .....+..
T Consensus 191 i~~l~~~-~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 269 (383)
T PLN03084 191 IDELKSD-KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTS 269 (383)
T ss_pred HHHhCCC-CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcc
Confidence 9999997 99999999999999999999999999999999875432111111110000000 00000 00000000
Q ss_pred CCCCCCCCchhhHHHhhhhhhccCCChH-HHHHHHHhcCCCCCCcccccccC-CcCccCCcceEEEEeCCCCCCCHHHHH
Q 018930 231 NGKDKPPTGFMFEKQQMKGLYFNQSPSK-DVALAMASMRPTPLGPIMEKLSL-SPEKYGTGRRFFIQTLDDRALSPDVQE 308 (348)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Pvl~i~G~~D~~vp~~~~~ 308 (348)
. ............+...+....... ........+.. ........+.. ......++|+++|+|++|.+++.+..+
T Consensus 270 ~---~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~-~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~ 345 (383)
T PLN03084 270 C---GPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKK-ELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVE 345 (383)
T ss_pred c---CccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhc-ccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHH
Confidence 0 000000001111111111111100 11111111111 11111111100 000123589999999999999999888
Q ss_pred HHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 309 KLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 309 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
.+++. ++.++++++++||++++|+|+++++.|.+|++
T Consensus 346 ~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 346 DFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 88887 58899999999999999999999999999986
No 16
>PLN02578 hydrolase
Probab=100.00 E-value=1.3e-30 Score=232.38 Aligned_cols=251 Identities=17% Similarity=0.232 Sum_probs=163.2
Q ss_pred CCeeeeeeecCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc
Q 018930 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (348)
Q Consensus 82 ~g~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (348)
+|..++|...+ ++++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+ ...++.+++++++.++++.+.
T Consensus 74 ~~~~i~Y~~~g-~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~-~~~~~~~~~a~~l~~~i~~~~ 150 (354)
T PLN02578 74 RGHKIHYVVQG-EGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKA-LIEYDAMVWRDQVADFVKEVV 150 (354)
T ss_pred CCEEEEEEEcC-CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCc-ccccCHHHHHHHHHHHHHHhc
Confidence 46666666543 568899999999999999999999987 599999999999999764 345799999999999999998
Q ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCCh--h-------hHHHHhh-cchhhhhhhh-hhhhhc
Q 018930 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRP--F-------DVFAEEL-GSAERFMQES-QFLIYG 230 (348)
Q Consensus 162 ~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~-------~~~~~~~-~~~~~~~~~~-~~~~~~ 230 (348)
.+ +++++|||+||.+++.+|.++|++|+++|++++......... . ....... .......... ....+.
T Consensus 151 ~~-~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (354)
T PLN02578 151 KE-PAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFW 229 (354)
T ss_pred cC-CeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHH
Confidence 76 999999999999999999999999999999987643221100 0 0000000 0000000000 000000
Q ss_pred CCCC----------CCCCchhhHHHhhhhhh----ccCCChHHHHHHHHh-c---CCCCCCcccccccCCcCccCCcceE
Q 018930 231 NGKD----------KPPTGFMFEKQQMKGLY----FNQSPSKDVALAMAS-M---RPTPLGPIMEKLSLSPEKYGTGRRF 292 (348)
Q Consensus 231 ~~~~----------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~Pvl 292 (348)
.... ......... +.+.+.+ ............... + ........+.. .++|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------i~~PvL 300 (354)
T PLN02578 230 QAKQPSRIESVLKSVYKDKSNVD-DYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSK--------LSCPLL 300 (354)
T ss_pred HhcCHHHHHHHHHHhcCCcccCC-HHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhc--------CCCCEE
Confidence 0000 000000000 0000000 000000000111000 0 01111112222 259999
Q ss_pred EEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 293 FIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 293 ~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
+|+|++|.++|.+..+.+.+.+|+++++++ ++||+++.|+|+++++.|.+|++
T Consensus 301 iI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 301 LLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 58999999999999999999986
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.98 E-value=6.6e-31 Score=234.16 Aligned_cols=256 Identities=14% Similarity=0.168 Sum_probs=160.7
Q ss_pred ecccCCeeeeeee-cC---CCCceEEEecCCCCCccc-HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHH
Q 018930 78 ESLSNGKQDTNIL-EN---IQYKKFVLIHGEGFGAWC-WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKP 152 (348)
Q Consensus 78 ~~~~~g~~~~~~~-~~---~~~~~vvllHG~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 152 (348)
....+|..+.+.. .+ ..+++|||+||++++... |..+++.|.+.||+|+++|+||||.|+.......+++++++|
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~d 145 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDD 145 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHH
Confidence 3446777776433 22 235789999999988765 678999999889999999999999997643344689999999
Q ss_pred HHHHHHhhcCC-----CcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCC-hhhHHHHhhcchhhhhhhhhh
Q 018930 153 LLDYLENLLED-----EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR-PFDVFAEELGSAERFMQESQF 226 (348)
Q Consensus 153 l~~~l~~l~~~-----~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 226 (348)
+.++++.+... .+++|+||||||++++.++.++|++|+++|+++|........ ...................
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~-- 223 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKA-- 223 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCc--
Confidence 99999887532 279999999999999999999999999999999865422110 0001100000000000000
Q ss_pred hhhcCCCCCCCCch-hhHHHhhhhh---hccCCChHHHHHHHHhcCC-CCCCcccccccCCcCccCCcceEEEEeCCCCC
Q 018930 227 LIYGNGKDKPPTGF-MFEKQQMKGL---YFNQSPSKDVALAMASMRP-TPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRA 301 (348)
Q Consensus 227 ~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~ 301 (348)
..... ........ .......... .+..... .......+.. ......+.+ .++|+|+|+|++|.+
T Consensus 224 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~l~~--------i~~P~Lii~G~~D~v 292 (349)
T PLN02385 224 KLVPQ-KDLAELAFRDLKKRKMAEYNVIAYKDKPR--LRTAVELLRTTQEIEMQLEE--------VSLPLLILHGEADKV 292 (349)
T ss_pred eecCC-CccccccccCHHHHHHhhcCcceeCCCcc--hHHHHHHHHHHHHHHHhccc--------CCCCEEEEEeCCCCc
Confidence 00000 00000000 0000000000 0000000 0000000000 000111122 259999999999999
Q ss_pred CCHHHHHHHHHhC--CCCcEEEecCCCCCCCccChHH----HHHHHHHHhc
Q 018930 302 LSPDVQEKLVREN--PPEGVYKIKGSDHCPFFSKPQS----LHKILVEIAQ 346 (348)
Q Consensus 302 vp~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~ 346 (348)
+|++..+.+.+.+ ++.++++++++||+++.|+|++ +.+.|.+||+
T Consensus 293 v~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~ 343 (349)
T PLN02385 293 TDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLD 343 (349)
T ss_pred cChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHH
Confidence 9999999999887 5689999999999999999987 7888889986
No 18
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.98 E-value=1.6e-30 Score=235.33 Aligned_cols=259 Identities=13% Similarity=0.065 Sum_probs=161.1
Q ss_pred CCeeeeeeecCC-C---CceEEEecCCCCCcccHHH-HHHHHH---hCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHH
Q 018930 82 NGKQDTNILENI-Q---YKKFVLIHGEGFGAWCWYK-TVASLE---EVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPL 153 (348)
Q Consensus 82 ~g~~~~~~~~~~-~---~~~vvllHG~~~~~~~~~~-~~~~L~---~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 153 (348)
++..+++....+ + +++|||+||++++...|.. ++..|. +.+|+|+++|+||||.|+.+....++++++++++
T Consensus 184 ~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l 263 (481)
T PLN03087 184 SNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMI 263 (481)
T ss_pred CCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHH
Confidence 445666655332 2 4799999999999999985 456665 3589999999999999976555668999999999
Q ss_pred H-HHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChh--hHHHHhhcchh--------hhhh
Q 018930 154 L-DYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPF--DVFAEELGSAE--------RFMQ 222 (348)
Q Consensus 154 ~-~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~ 222 (348)
. .++++++.+ +++++||||||.+++.+|.++|++|+++|+++++......... ........... ....
T Consensus 264 ~~~ll~~lg~~-k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (481)
T PLN03087 264 ERSVLERYKVK-SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVA 342 (481)
T ss_pred HHHHHHHcCCC-CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHH
Confidence 5 899999987 9999999999999999999999999999999976433221110 00000000000 0000
Q ss_pred hhhhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHH------------HH-HhcCCCC--CCcccccccCCcCccC
Q 018930 223 ESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVAL------------AM-ASMRPTP--LGPIMEKLSLSPEKYG 287 (348)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~--~~~~~~~~~~~~~~~~ 287 (348)
.+.................. .+.+...+........... .. ....... ....+..+ ...+
T Consensus 343 ~w~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l----~~~I 417 (481)
T PLN03087 343 CWYEHISRTICLVICKNHRL-WEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHV----RDQL 417 (481)
T ss_pred HHHHHHHhhhhcccccchHH-HHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHH----HHhC
Confidence 00000000000000000000 0000000000000000000 00 0000000 00000000 0112
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCc-cChHHHHHHHHHHhc
Q 018930 288 TGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFF-SKPQSLHKILVEIAQ 346 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 346 (348)
++|+|+|+|++|.++|++..+.+.+.+|++++++++++||++++ |+|++|++.|.+|.+
T Consensus 418 ~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 418 KCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 59999999999999999999999999999999999999999886 999999999999975
No 19
>PRK06489 hypothetical protein; Provisional
Probab=99.98 E-value=1.3e-30 Score=233.09 Aligned_cols=256 Identities=14% Similarity=0.164 Sum_probs=157.2
Q ss_pred cCCeeeeeeecCC-C-------CceEEEecCCCCCcccHH--HHHHHH-------HhCCCeEEEeCCCCCCCCCCCCCC-
Q 018930 81 SNGKQDTNILENI-Q-------YKKFVLIHGEGFGAWCWY--KTVASL-------EEVGLIPTALDLKGSGIDLSDTNS- 142 (348)
Q Consensus 81 ~~g~~~~~~~~~~-~-------~~~vvllHG~~~~~~~~~--~~~~~L-------~~~G~~vi~~D~~G~G~S~~~~~~- 142 (348)
.+|..++|...+. + +|+|||+||++++...|. .+.+.| ..++|+||++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 3456666655433 3 789999999999998886 565555 134699999999999999754321
Q ss_pred -----CCChHhhhHHHHHHH-HhhcCCCcEE-EEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCCh--h-hHHHH
Q 018930 143 -----VTTLAEYSKPLLDYL-ENLLEDEKVI-LVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRP--F-DVFAE 212 (348)
Q Consensus 143 -----~~~~~~~~~~l~~~l-~~l~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~-~~~~~ 212 (348)
.++++++++++.+++ ++++++ +++ |+||||||++|+.+|.++|++|+++|++++......... . .....
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~-~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~ 205 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVK-HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIE 205 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCC-ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHH
Confidence 478999999988855 889987 875 899999999999999999999999999987542211100 0 00000
Q ss_pred hhcchhh-----------hhhhhh-hh-hhcCC-----CCCCCCchhhHHHhhhhhhccC--CChHHHHHHHHhcCCCCC
Q 018930 213 ELGSAER-----------FMQESQ-FL-IYGNG-----KDKPPTGFMFEKQQMKGLYFNQ--SPSKDVALAMASMRPTPL 272 (348)
Q Consensus 213 ~~~~~~~-----------~~~~~~-~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 272 (348)
....... ...... .. ..... ...... .......+...+... ................+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 284 (360)
T PRK06489 206 SIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPT-RAAADKLVDERLAAPVTADANDFLYQWDSSRDYNP 284 (360)
T ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCC-hHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccCh
Confidence 0000000 000000 00 00000 000000 000000111000000 001111111111111122
Q ss_pred CcccccccCCcCccCCcceEEEEeCCCCCCCHHHH--HHHHHhCCCCcEEEecCC----CCCCCccChHHHHHHHHHHhc
Q 018930 273 GPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQ--EKLVRENPPEGVYKIKGS----DHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 273 ~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~--~~~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~ 346 (348)
...+.++ ++|+|+|+|++|.++|++.. +.+.+.+|++++++++++ ||.++ ++|++|++.|.+||+
T Consensus 285 ~~~L~~I--------~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~ 355 (360)
T PRK06489 285 SPDLEKI--------KAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLA 355 (360)
T ss_pred HHHHHhC--------CCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHH
Confidence 2222333 49999999999999999875 789999999999999996 99997 899999999999996
Q ss_pred C
Q 018930 347 I 347 (348)
Q Consensus 347 ~ 347 (348)
.
T Consensus 356 ~ 356 (360)
T PRK06489 356 Q 356 (360)
T ss_pred h
Confidence 3
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=2.4e-30 Score=219.69 Aligned_cols=238 Identities=14% Similarity=0.217 Sum_probs=158.5
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECH
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (348)
++|+|||+||++.+...|..+++.|.. ||+|+++|+||||.|+.+ ...++++++++++.++++.++.+ +++++||||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~i~~~~~~-~v~liG~S~ 88 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAP-EGPYSIEDLADDVLALLDHLGIE-RAVFCGLSL 88 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhCCC-ceEEEEeCc
Confidence 568899999999999999999999976 799999999999999653 34579999999999999999886 999999999
Q ss_pred HHHHHHHHHHhCCcccceEEEecccccCCCCChhh-HHHHhhc-chhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhh
Q 018930 174 GGACVSYALEHFPQKISKAIFLCATMVSDGQRPFD-VFAEELG-SAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLY 251 (348)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (348)
||.+++.+|.++|++|+++|++++........... ....... ................... .... .....+...+
T Consensus 89 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ 165 (251)
T TIGR02427 89 GGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFR-EAHP--ARLDLYRNML 165 (251)
T ss_pred hHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccc-cCCh--HHHHHHHHHH
Confidence 99999999999999999999998754322111110 0000000 0000000000000000000 0000 0000111111
Q ss_pred ccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCc
Q 018930 252 FNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFF 331 (348)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 331 (348)
... ...........+........+.+ .++|+++++|++|.++|.+..+.+.+.+++.++++++++||++++
T Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 236 (251)
T TIGR02427 166 VRQ-PPDGYAGCCAAIRDADFRDRLGA--------IAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCV 236 (251)
T ss_pred Hhc-CHHHHHHHHHHHhcccHHHHhhh--------cCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccc
Confidence 110 01111111111111111111222 248999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHhc
Q 018930 332 SKPQSLHKILVEIAQ 346 (348)
Q Consensus 332 e~p~~~~~~i~~fl~ 346 (348)
++|+++.+.|.+|++
T Consensus 237 ~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 237 EQPEAFNAALRDFLR 251 (251)
T ss_pred cChHHHHHHHHHHhC
Confidence 999999999999984
No 21
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=2.6e-30 Score=218.73 Aligned_cols=233 Identities=16% Similarity=0.226 Sum_probs=149.1
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHH
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (348)
.|+|||+||++++...|..+++.|.+ +|+|+++|+||+|.|+.. ..++++++++++.+.+ . ++++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~----~-~~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF--GPLSLADAAEAIAAQA----P-DPAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC--CCcCHHHHHHHHHHhC----C-CCeEEEEEcHH
Confidence 37899999999999999999999987 699999999999998642 3457777777766543 2 49999999999
Q ss_pred HHHHHHHHHhCCcccceEEEecccccCCCCChh------hHHHHhhcchh-hhhhhhhhhhhcCCCCCCCCchhhHHHhh
Q 018930 175 GACVSYALEHFPQKISKAIFLCATMVSDGQRPF------DVFAEELGSAE-RFMQESQFLIYGNGKDKPPTGFMFEKQQM 247 (348)
Q Consensus 175 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (348)
|.+++.+|.++|++|.++|++++.......... ........... ........+........ ..... ....+
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~ 153 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGT-PTARQ-DARAL 153 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-Cccch-HHHHH
Confidence 999999999999999999999876532211100 00000000000 00000000000000000 00000 00011
Q ss_pred hhhhccC-CC-hHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCC
Q 018930 248 KGLYFNQ-SP-SKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGS 325 (348)
Q Consensus 248 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~ 325 (348)
...+... .. ..........+...+....+.+ +++|+++|+|++|.++|++..+.+.+.++++++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILATVDLRQPLQN--------ISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKA 225 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhcccHHHHHhc--------CCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCC
Confidence 1111100 01 0111111111111111112222 249999999999999999999999999999999999999
Q ss_pred CCCCCccChHHHHHHHHHHh
Q 018930 326 DHCPFFSKPQSLHKILVEIA 345 (348)
Q Consensus 326 gH~~~~e~p~~~~~~i~~fl 345 (348)
||++++|+|+++++.|.+|+
T Consensus 226 gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 226 AHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCccccCHHHHHHHHHhhC
Confidence 99999999999999999996
No 22
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=1.1e-29 Score=226.97 Aligned_cols=298 Identities=16% Similarity=0.159 Sum_probs=177.3
Q ss_pred CCCcccccchhhhhhhhHHHHHHHHHHHHHHhcccccCcccCcccccCCCCCccceeeeecccCCeeeeee--ec--CCC
Q 018930 19 GSRSKRMGRSQRKMLAEEEFLHRQALSMALQQHQLSQRFEGSMSRRIGGNTSSRRRTLSESLSNGKQDTNI--LE--NIQ 94 (348)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~--~~~ 94 (348)
|.+.++|+|++-....++++..+++|+..+..... .......+...+..++..+++. .. ...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~g~~~~~~~~~~~~~~~l~~~~~~p~~~~~ 135 (395)
T PLN02652 70 PAPSRRWRRRMAWKLEEEDTRRRRALAEGVEMVED--------------GEGTRWATSLFYGARRNALFCRSWAPAAGEM 135 (395)
T ss_pred CCccccchhccchhhcchHHHHHHHHHHhhhheec--------------CCCceEEEEEEECCCCCEEEEEEecCCCCCC
Confidence 33445544332233457788888888865422111 1111222333344444444422 22 233
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC---CcEEEEEE
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED---EKVILVGH 171 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~---~~v~lvGh 171 (348)
.++|||+||++++...|..+++.|.++||+|+++|+||||.|+.......+++.+++|+.++++.+... .+++|+||
T Consensus 136 ~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGh 215 (395)
T PLN02652 136 RGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGH 215 (395)
T ss_pred ceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 568999999999999999999999999999999999999999765444568888999999999887532 37999999
Q ss_pred CHHHHHHHHHHHhCCc---ccceEEEecccccCCCCChhhHHHHhhcchhhhhhhh-hhhhhcCCCCCCCCchhhHHHhh
Q 018930 172 SSGGACVSYALEHFPQ---KISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQES-QFLIYGNGKDKPPTGFMFEKQQM 247 (348)
Q Consensus 172 S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 247 (348)
||||.+++.++. +|+ +|+++|+.+|.......... . ..... +.... ..+....... ............
T Consensus 216 SmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~--~-~~~~~---l~~~~~p~~~~~~~~~-~~~~~s~~~~~~ 287 (395)
T PLN02652 216 STGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPI--V-GAVAP---IFSLVAPRFQFKGANK-RGIPVSRDPAAL 287 (395)
T ss_pred CHHHHHHHHHHh-ccCcccccceEEEECcccccccchHH--H-HHHHH---HHHHhCCCCcccCccc-ccCCcCCCHHHH
Confidence 999999998775 564 89999999886432211110 0 00000 00000 0000000000 000000001111
Q ss_pred hhhhccCCC---hHHHHHHHHhcCCC-CCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC--CCcEEE
Q 018930 248 KGLYFNQSP---SKDVALAMASMRPT-PLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP--PEGVYK 321 (348)
Q Consensus 248 ~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~--~~~~~~ 321 (348)
...+..... .............. .....+.+ +++|+|+++|++|.++|++..+.+++.++ +.++++
T Consensus 288 ~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~--------I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~ 359 (395)
T PLN02652 288 LAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKS--------VTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKL 359 (395)
T ss_pred HHHhcCCCcccCCchHHHHHHHHHHHHHHHhhccc--------CCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEE
Confidence 111100000 00000000000000 00111122 24999999999999999999999988864 468999
Q ss_pred ecCCCCCCCcc-ChHHHHHHHHHHhc
Q 018930 322 IKGSDHCPFFS-KPQSLHKILVEIAQ 346 (348)
Q Consensus 322 i~~~gH~~~~e-~p~~~~~~i~~fl~ 346 (348)
+++++|.+++| +++++.+.|.+||+
T Consensus 360 ~~ga~H~l~~e~~~e~v~~~I~~FL~ 385 (395)
T PLN02652 360 YDGFLHDLLFEPEREEVGRDIIDWME 385 (395)
T ss_pred ECCCeEEeccCCCHHHHHHHHHHHHH
Confidence 99999998887 79999999999986
No 23
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=1.6e-29 Score=218.40 Aligned_cols=247 Identities=12% Similarity=0.126 Sum_probs=154.5
Q ss_pred cCCeeeeee-ecC--CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHH
Q 018930 81 SNGKQDTNI-LEN--IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL 157 (348)
Q Consensus 81 ~~g~~~~~~-~~~--~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 157 (348)
.+|..+.+. +.+ ...+.|+++||++.+...|..+++.|.+.||+|+++|+||||.|+.......++.++++|+.+++
T Consensus 8 ~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l 87 (276)
T PHA02857 8 LDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHV 87 (276)
T ss_pred CCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHH
Confidence 467666643 232 33556777799999999999999999999999999999999999754333446677777777777
Q ss_pred Hhhc---CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCC
Q 018930 158 ENLL---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKD 234 (348)
Q Consensus 158 ~~l~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (348)
+.+. ...+++|+||||||.+|+.+|.++|++|+++|+++|............+.... ..........
T Consensus 88 ~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 157 (276)
T PHA02857 88 VTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKL----------MGIFYPNKIV 157 (276)
T ss_pred HHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHH----------HHHhCCCCcc
Confidence 6542 12389999999999999999999999999999999865422111111100000 0000000000
Q ss_pred C--CCCchhhHHHhhhhhhccC-----CChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHH
Q 018930 235 K--PPTGFMFEKQQMKGLYFNQ-----SPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQ 307 (348)
Q Consensus 235 ~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~ 307 (348)
. ................... .............. ......+. ..++|+|+|+|++|.++|++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~--------~i~~Pvliv~G~~D~i~~~~~~ 228 (276)
T PHA02857 158 GKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKAT-NKVRKIIP--------KIKTPILILQGTNNEISDVSGA 228 (276)
T ss_pred CCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHH-HHHHHhcc--------cCCCCEEEEecCCCCcCChHHH
Confidence 0 0000000000000000000 00000000000000 00001111 2259999999999999999999
Q ss_pred HHHHHhC-CCCcEEEecCCCCCCCccCh---HHHHHHHHHHhc
Q 018930 308 EKLVREN-PPEGVYKIKGSDHCPFFSKP---QSLHKILVEIAQ 346 (348)
Q Consensus 308 ~~~~~~~-~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~ 346 (348)
+.+.+.+ ++.++.+++++||.++.|++ +++.+.|.+||+
T Consensus 229 ~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~ 271 (276)
T PHA02857 229 YYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIF 271 (276)
T ss_pred HHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHH
Confidence 9998877 46899999999999999876 468888889985
No 24
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.9e-29 Score=210.85 Aligned_cols=250 Identities=17% Similarity=0.207 Sum_probs=158.2
Q ss_pred cCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC---CCCChHhhhHHHHHHHHhhcCCCcEE
Q 018930 91 ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN---SVTTLAEYSKPLLDYLENLLEDEKVI 167 (348)
Q Consensus 91 ~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~v~ 167 (348)
+...++++|||||+|.+...|..-++.|++ .++|+++|++|+|.|+.+.. .......+++.++++..+.++. +.+
T Consensus 86 ~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~-Kmi 163 (365)
T KOG4409|consen 86 ESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLE-KMI 163 (365)
T ss_pred cccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCc-cee
Confidence 345688999999999999999999999999 59999999999999986543 3334568999999999999997 999
Q ss_pred EEEECHHHHHHHHHHHhCCcccceEEEecccccCCCC-ChhhH------HHHhhcchhhhhhhhhhhhhcCCCCCCCCch
Q 018930 168 LVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQ-RPFDV------FAEELGSAERFMQESQFLIYGNGKDKPPTGF 240 (348)
Q Consensus 168 lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (348)
|+|||+||++|..||.+||++|++|||++|....... ...+. +.............. ..+...+...+....
T Consensus 164 lvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl-~~LR~~Gp~Gp~Lv~ 242 (365)
T KOG4409|consen 164 LVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPL-ALLRLMGPLGPKLVS 242 (365)
T ss_pred EeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHH-HHHHhccccchHHHh
Confidence 9999999999999999999999999999998765432 11110 000000000000000 000000000000000
Q ss_pred ------------hhHHHhhhhhhcc----CCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCH
Q 018930 241 ------------MFEKQQMKGLYFN----QSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSP 304 (348)
Q Consensus 241 ------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~ 304 (348)
...++.+.++++. ....................++++.+... ..+||+++|+|++|.+-..
T Consensus 243 ~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l---~~~~pv~fiyG~~dWmD~~ 319 (365)
T KOG4409|consen 243 RLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLREL---KKDVPVTFIYGDRDWMDKN 319 (365)
T ss_pred hhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhh---ccCCCEEEEecCcccccch
Confidence 0011111222211 11111111111111222223333333211 1149999999999976543
Q ss_pred HHHHHHHHh--CCCCcEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 305 DVQEKLVRE--NPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 305 ~~~~~~~~~--~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
....+.+. ...++.++++++||.+++++|+.|++.|.++++.
T Consensus 320 -~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 320 -AGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred -hHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 33344443 3457999999999999999999999999999863
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=1.2e-29 Score=214.92 Aligned_cols=227 Identities=17% Similarity=0.112 Sum_probs=142.3
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHH
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (348)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+. ..+++++++++.+++++++.+ +++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSYNIL-PYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHcCCC-CeEEEEECHH
Confidence 578999999999999999999988 3 5999999999999997543 348999999999999999986 9999999999
Q ss_pred HHHHHHHHHhCCcc-cceEEEecccccCCCCChhhHHHHhhcchhhhhhhh-----hhhh---hcCCCCCCCCchhhHHH
Q 018930 175 GACVSYALEHFPQK-ISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQES-----QFLI---YGNGKDKPPTGFMFEKQ 245 (348)
Q Consensus 175 g~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~ 245 (348)
|.+|+.+|.++|+. |+++|++++....... ......... ...+.... ...+ ....... .........
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 152 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNA--EERQARWQN-DRQWAQRFRQEPLEQVLADWYQQPVFA-SLNAEQRQQ 152 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCH--HHHHHHHhh-hHHHHHHhccCcHHHHHHHHHhcchhh-ccCccHHHH
Confidence 99999999999764 9999998865422111 000000000 00000000 0000 0000000 000000000
Q ss_pred hhhhhhccCCChHHHHHHHHhcC---CCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEe
Q 018930 246 QMKGLYFNQSPSKDVALAMASMR---PTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKI 322 (348)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i 322 (348)
... ... ............... .......+.+ .++|+++|+|++|..+. .+.+. .+++++++
T Consensus 153 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i 216 (242)
T PRK11126 153 LVA-KRS-NNNGAAVAAMLEATSLAKQPDLRPALQA--------LTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVI 216 (242)
T ss_pred HHH-hcc-cCCHHHHHHHHHhcCcccCCcHHHHhhc--------cCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEe
Confidence 000 000 000111111111110 0011111222 25999999999998552 22332 37899999
Q ss_pred cCCCCCCCccChHHHHHHHHHHhc
Q 018930 323 KGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 323 ~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
+++||++++|+|+++++.|.+|++
T Consensus 217 ~~~gH~~~~e~p~~~~~~i~~fl~ 240 (242)
T PRK11126 217 PNAGHNAHRENPAAFAASLAQILR 240 (242)
T ss_pred CCCCCchhhhChHHHHHHHHHHHh
Confidence 999999999999999999999986
No 26
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=9.2e-30 Score=221.30 Aligned_cols=251 Identities=21% Similarity=0.263 Sum_probs=159.0
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHhC-CCeEEEeCCCCCC-CCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEE
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSG-IDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G-~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (348)
.+++||++|||+++...|+.++..|.+. |+.|+++|++|+| .|..+....|+..++++.+..+....... +++++||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~-~~~lvgh 135 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE-PVSLVGH 135 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc-ceEEEEe
Confidence 6889999999999999999999988875 5999999999999 44555566699999999999999998886 8999999
Q ss_pred CHHHHHHHHHHHhCCcccceEE---EecccccCCCCChhhH---HHHhhcchhhhhhh---hhhhhhcCCCCCCC----C
Q 018930 172 SSGGACVSYALEHFPQKISKAI---FLCATMVSDGQRPFDV---FAEELGSAERFMQE---SQFLIYGNGKDKPP----T 238 (348)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----~ 238 (348)
|+||.+|+.+|+.+|+.|+++| ++++............ ..........+... .....+........ .
T Consensus 136 S~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 215 (326)
T KOG1454|consen 136 SLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYT 215 (326)
T ss_pred CcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeecc
Confidence 9999999999999999999999 5555544332211111 11000000000000 00000000000000 0
Q ss_pred chhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCc-CccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCC
Q 018930 239 GFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSP-EKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPE 317 (348)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~ 317 (348)
......+.....................+....... +...... ....++|+|+++|++|+++|.+..+.+.+.+|++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~ 293 (326)
T KOG1454|consen 216 DPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGF--DENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNA 293 (326)
T ss_pred ccccchhhhhhheecccccchhhhheeeEEEeccCc--cchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCc
Confidence 000000000000000000000000000000000000 0000000 1112499999999999999999999999999999
Q ss_pred cEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 318 GVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 318 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
++++++++||.+++|+|+++++.|..|++.
T Consensus 294 ~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 294 ELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred eEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999863
No 27
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.7e-29 Score=224.51 Aligned_cols=250 Identities=12% Similarity=0.072 Sum_probs=154.2
Q ss_pred CCeeeeeeecCCCCceEEEecCCCCCcc------------cHHHHHH---HHHhCCCeEEEeCCCCCCCCCCCCCCCCCh
Q 018930 82 NGKQDTNILENIQYKKFVLIHGEGFGAW------------CWYKTVA---SLEEVGLIPTALDLKGSGIDLSDTNSVTTL 146 (348)
Q Consensus 82 ~g~~~~~~~~~~~~~~vvllHG~~~~~~------------~~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~ 146 (348)
+|..++|...+.+++++||+||++++.. .|..++. .|...+|+||++|+||||.|.. ..+++
T Consensus 44 ~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~~~~~ 120 (343)
T PRK08775 44 EDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---VPIDT 120 (343)
T ss_pred CCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---CCCCH
Confidence 5566776655444556777777776665 6888886 5743369999999999998742 34688
Q ss_pred HhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcch---------
Q 018930 147 AEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSA--------- 217 (348)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--------- 217 (348)
+++++++.++++++++++.++|+||||||++|+.+|.++|++|.++|++++...... ............
T Consensus 121 ~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 198 (343)
T PRK08775 121 ADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHP--YAAAWRALQRRAVALGQLQCA 198 (343)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCH--HHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999872457999999999999999999999999999998653221 110011000000
Q ss_pred --h--hhhhhhhh--------hhhcCCCCCC--CC-chhhHHHhhhh---hhccCCChHHHHHHHHhcCCCCCCcccccc
Q 018930 218 --E--RFMQESQF--------LIYGNGKDKP--PT-GFMFEKQQMKG---LYFNQSPSKDVALAMASMRPTPLGPIMEKL 279 (348)
Q Consensus 218 --~--~~~~~~~~--------~~~~~~~~~~--~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (348)
. ........ .......... .. ........+.. .................... ....+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~-- 274 (343)
T PRK08775 199 EKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL--HRVDPE-- 274 (343)
T ss_pred chhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh--cCCChh--
Confidence 0 00000000 0000000000 00 00000000000 00000000000000000000 000112
Q ss_pred cCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC-CCCcEEEecC-CCCCCCccChHHHHHHHHHHhc
Q 018930 280 SLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN-PPEGVYKIKG-SDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 280 ~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~-~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
.+++|+|+|+|++|.++|++..+.+.+.+ |+++++++++ +||++++|+|++|++.|.+||+
T Consensus 275 ------~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~ 337 (343)
T PRK08775 275 ------AIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALR 337 (343)
T ss_pred ------cCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHH
Confidence 23589999999999999999888888887 6999999985 9999999999999999999996
No 28
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=9.4e-29 Score=214.43 Aligned_cols=248 Identities=15% Similarity=0.102 Sum_probs=149.9
Q ss_pred CCceEEEecCCCCCcccH-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCC--CCChHhhhHHHHHHHHhhcCCCcEEEEE
Q 018930 94 QYKKFVLIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNS--VTTLAEYSKPLLDYLENLLEDEKVILVG 170 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (348)
.+++|||+||++++...| ..+...|.+.||+|+++|+||+|.|+.+... .++++++++++.+++++++.. +++++|
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~liG 102 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLD-KFYLLG 102 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 368999999987666554 5555666666899999999999999754333 378999999999999999986 899999
Q ss_pred ECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchh-hhhhhhhhhhhcCCCCCCCCchhhHHHhhhh
Q 018930 171 HSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAE-RFMQESQFLIYGNGKDKPPTGFMFEKQQMKG 249 (348)
Q Consensus 171 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (348)
|||||.+++.+|..+|++|.++|++++...... ............. ........... ...................
T Consensus 103 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 179 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQHLKGLIISSMLDSAPE--YVKELNRLRKELPPEVRAAIKRCEA-SGDYDNPEYQEAVEVFYHH 179 (288)
T ss_pred eehHHHHHHHHHHhCccccceeeEecccccchH--HHHHHHHHHhhcChhHHHHHHHHHh-ccCcchHHHHHHHHHHHHH
Confidence 999999999999999999999999987543211 1000000000000 00000000000 0000000000000000000
Q ss_pred hhc-cCCChHHHHHHHH--------hcC-CCCC--CcccccccC-CcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCC
Q 018930 250 LYF-NQSPSKDVALAMA--------SMR-PTPL--GPIMEKLSL-SPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPP 316 (348)
Q Consensus 250 ~~~-~~~~~~~~~~~~~--------~~~-~~~~--~~~~~~~~~-~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~ 316 (348)
... ............. .+. .... ...+..... .....+++|+++++|++|.+ +++..+.+.+.+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~ 258 (288)
T TIGR01250 180 LLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAG 258 (288)
T ss_pred hhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccC
Confidence 000 0000000000000 000 0000 000000000 01123469999999999985 66778888999999
Q ss_pred CcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 317 EGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 317 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
.++++++++||++++|+|+++++.|.+|++
T Consensus 259 ~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 259 SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999985
No 29
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=3.3e-29 Score=221.92 Aligned_cols=254 Identities=18% Similarity=0.202 Sum_probs=155.7
Q ss_pred ccCCeeeeeee-cC----CCCceEEEecCCCCCc-ccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHH
Q 018930 80 LSNGKQDTNIL-EN----IQYKKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPL 153 (348)
Q Consensus 80 ~~~g~~~~~~~-~~----~~~~~vvllHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 153 (348)
..+|.+++++. .. ...++|||+||++.+. +.|..+...|.++||+|+++|+||||.|+.......+++.+++|+
T Consensus 39 ~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~ 118 (330)
T PLN02298 39 SPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDC 118 (330)
T ss_pred cCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHH
Confidence 35788887643 22 2345799999998664 456778888998899999999999999975434346889999999
Q ss_pred HHHHHhhcCC-----CcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhH-HHHhhcchhhhhhhhhhh
Q 018930 154 LDYLENLLED-----EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDV-FAEELGSAERFMQESQFL 227 (348)
Q Consensus 154 ~~~l~~l~~~-----~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 227 (348)
.++++.+... .+++|+||||||.+++.++.++|++|+++|++++............ ..........+... .
T Consensus 119 ~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 195 (330)
T PLN02298 119 LSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPT---L 195 (330)
T ss_pred HHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCC---C
Confidence 9999987531 3799999999999999999999999999999998653221100000 00000000000000 0
Q ss_pred hhcCCCCCCCCchhh-HHHhhh---hhhccCCC-hHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCC
Q 018930 228 IYGNGKDKPPTGFMF-EKQQMK---GLYFNQSP-SKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRAL 302 (348)
Q Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~v 302 (348)
............... ....+. ...+.... ............ .....+.. .++|+|+|+|++|.++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~--------i~~PvLii~G~~D~iv 265 (330)
T PLN02298 196 AIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTD--YLGKKLKD--------VSIPFIVLHGSADVVT 265 (330)
T ss_pred ccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHH--HHHHhhhh--------cCCCEEEEecCCCCCC
Confidence 000000000000000 000000 00000000 000000000000 00011112 2499999999999999
Q ss_pred CHHHHHHHHHhCC--CCcEEEecCCCCCCCccChHH----HHHHHHHHhc
Q 018930 303 SPDVQEKLVRENP--PEGVYKIKGSDHCPFFSKPQS----LHKILVEIAQ 346 (348)
Q Consensus 303 p~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~ 346 (348)
|++..+.+.+.++ +.++++++++||.+++++|+. +.+.|.+||.
T Consensus 266 p~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~ 315 (330)
T PLN02298 266 DPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLN 315 (330)
T ss_pred CHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHH
Confidence 9999999988774 789999999999999998864 6667778875
No 30
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=9.6e-29 Score=218.37 Aligned_cols=259 Identities=14% Similarity=0.081 Sum_probs=158.1
Q ss_pred ccCCeeeeeee-cC-CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-----CCCChHhhhHH
Q 018930 80 LSNGKQDTNIL-EN-IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-----SVTTLAEYSKP 152 (348)
Q Consensus 80 ~~~g~~~~~~~-~~-~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~ 152 (348)
..+|..++|.. ++ ..+++||++||++++...|..++..|.+.||+|+++|+||||.|+.... ...++++++++
T Consensus 37 ~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d 116 (330)
T PRK10749 37 GVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDD 116 (330)
T ss_pred cCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHH
Confidence 45666666554 32 3467999999999998899999999988899999999999999964321 22589999999
Q ss_pred HHHHHHhh----cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhh-
Q 018930 153 LLDYLENL----LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFL- 227 (348)
Q Consensus 153 l~~~l~~l----~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 227 (348)
+..+++.+ +.. +++++||||||.+++.+|.++|++|+++|+++|..............................
T Consensus 117 ~~~~~~~~~~~~~~~-~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (330)
T PRK10749 117 LAAFWQQEIQPGPYR-KRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYA 195 (330)
T ss_pred HHHHHHHHHhcCCCC-CeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCC
Confidence 99999886 444 999999999999999999999999999999988643221111111000000000000000000
Q ss_pred hhcCCCCCCC---CchhhHHH---hhhhhhccCCCh----HHHHHHHHhcCC-CCCCcccccccCCcCccCCcceEEEEe
Q 018930 228 IYGNGKDKPP---TGFMFEKQ---QMKGLYFNQSPS----KDVALAMASMRP-TPLGPIMEKLSLSPEKYGTGRRFFIQT 296 (348)
Q Consensus 228 ~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Pvl~i~G 296 (348)
.......... .......+ ...+.+...... .........+.. ........ ..++|+|+|+|
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~i~~P~Lii~G 267 (330)
T PRK10749 196 IGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAG--------DITTPLLLLQA 267 (330)
T ss_pred CCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhcc--------CCCCCEEEEEe
Confidence 0000000000 00000000 000111111000 000000000000 00000111 12489999999
Q ss_pred CCCCCCCHHHHHHHHHhC-------CCCcEEEecCCCCCCCccCh---HHHHHHHHHHhcC
Q 018930 297 LDDRALSPDVQEKLVREN-------PPEGVYKIKGSDHCPFFSKP---QSLHKILVEIAQI 347 (348)
Q Consensus 297 ~~D~~vp~~~~~~~~~~~-------~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~ 347 (348)
++|.+++++..+.+.+.+ +++++++++|+||.++.|.+ +++.+.|.+|++.
T Consensus 268 ~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 268 EEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 999999999988888765 34589999999999999886 5688888898863
No 31
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=4.4e-30 Score=214.57 Aligned_cols=221 Identities=22% Similarity=0.346 Sum_probs=148.7
Q ss_pred EEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHH
Q 018930 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (348)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (348)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.... ..++++++++++.+++++++.+ +++|+|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK-KVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS-SEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc-cccccccccccc
Confidence 7999999999999999999996 589999999999999976443 4679999999999999999986 999999999999
Q ss_pred HHHHHHHhCCcccceEEEecccccCCCCC----hhhHHHHhhcchhhhhhhhh-hhhhcCCCCCCCCchhhHHHhhhhhh
Q 018930 177 CVSYALEHFPQKISKAIFLCATMVSDGQR----PFDVFAEELGSAERFMQESQ-FLIYGNGKDKPPTGFMFEKQQMKGLY 251 (348)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (348)
+++.++.++|++|+++|++++........ ....+............... ..+.. ...........
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 148 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYR----------WFDGDEPEDLI 148 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHTHHHHHHHH
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccc----------ccccccccccc
Confidence 99999999999999999999976422100 00011111100000000000 00000 00000011100
Q ss_pred ccCCChHHHHHHHHh-cCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCC
Q 018930 252 FNQSPSKDVALAMAS-MRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPF 330 (348)
Q Consensus 252 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~ 330 (348)
.. ........... ............+ ++|+++++|++|.+++.+..+.+.+.++++++++++++||+++
T Consensus 149 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~--------~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 218 (228)
T PF12697_consen 149 RS--SRRALAEYLRSNLWQADLSEALPRI--------KVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLF 218 (228)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHHGS--------SSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHH
T ss_pred cc--ccccccccccccccccccccccccc--------CCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccH
Confidence 00 00000000000 0000111112222 4899999999999999999999999999999999999999999
Q ss_pred ccChHHHHHH
Q 018930 331 FSKPQSLHKI 340 (348)
Q Consensus 331 ~e~p~~~~~~ 340 (348)
+|+|++|++.
T Consensus 219 ~~~p~~~~~a 228 (228)
T PF12697_consen 219 LEQPDEVAEA 228 (228)
T ss_dssp HHSHHHHHHH
T ss_pred HHCHHHHhcC
Confidence 9999999864
No 32
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=6.5e-29 Score=220.74 Aligned_cols=258 Identities=11% Similarity=0.050 Sum_probs=149.9
Q ss_pred CCeeeeeeecCC----CCceEEEecCCCCCcccHHHHH---HHHHhCCCeEEEeCCCCCCCCCCCCC--CCCChHh----
Q 018930 82 NGKQDTNILENI----QYKKFVLIHGEGFGAWCWYKTV---ASLEEVGLIPTALDLKGSGIDLSDTN--SVTTLAE---- 148 (348)
Q Consensus 82 ~g~~~~~~~~~~----~~~~vvllHG~~~~~~~~~~~~---~~L~~~G~~vi~~D~~G~G~S~~~~~--~~~~~~~---- 148 (348)
+|..++|...+. +.|+||++||++++...|..++ +.|...+|+||++|+||||.|+.+.. ..+++++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 103 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHV 103 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCce
Confidence 445555554332 3356777777777766776554 46765579999999999999975432 2344443
Q ss_pred -hhHHHHH----HHHhhcCCCc-EEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCCh--hhHHHHhhcc----
Q 018930 149 -YSKPLLD----YLENLLEDEK-VILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRP--FDVFAEELGS---- 216 (348)
Q Consensus 149 -~~~~l~~----~l~~l~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~---- 216 (348)
+++++.+ ++++++++ + ++||||||||++|+.+|.+||++|+++|++++......... ..........
T Consensus 104 ~~~~~~~~~~~~l~~~lgi~-~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~ 182 (339)
T PRK07581 104 TIYDNVRAQHRLLTEKFGIE-RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAF 182 (339)
T ss_pred eHHHHHHHHHHHHHHHhCCC-ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 4566654 66889997 8 58999999999999999999999999999987653211000 0000000000
Q ss_pred ------------hhhhhhhhh------hhhhcCCCCCCCCc--hhhHHHhhhhhhccCCChHHHHHHHHhcCCCCC----
Q 018930 217 ------------AERFMQESQ------FLIYGNGKDKPPTG--FMFEKQQMKGLYFNQSPSKDVALAMASMRPTPL---- 272 (348)
Q Consensus 217 ------------~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 272 (348)
......... ..+........... ................. .........+.....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~ 261 (339)
T PRK07581 183 NGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDP-NNLLAMLWTWQRGDISRNP 261 (339)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCc-ccHHHHHHHhhhcccccCc
Confidence 000000000 00000000000000 00000011111111111 111111000100000
Q ss_pred ---CcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecC-CCCCCCccChHHHHHHHHHHhc
Q 018930 273 ---GPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKG-SDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 273 ---~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
......+ ..+++|+|+|+|++|..+|++..+.+.+.+|+++++++++ +||++++++|+++++.|.+||+
T Consensus 262 ~~~~d~~~~L-----~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~ 334 (339)
T PRK07581 262 AYGGDLAAAL-----GSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALK 334 (339)
T ss_pred ccCCCHHHHH-----hcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHH
Confidence 0111111 1235999999999999999999999999999999999998 9999999999999999999986
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.4e-27 Score=215.30 Aligned_cols=109 Identities=18% Similarity=0.256 Sum_probs=91.2
Q ss_pred cCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCh----HhhhHHHHHHHHhhcCCCcE
Q 018930 91 ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTL----AEYSKPLLDYLENLLEDEKV 166 (348)
Q Consensus 91 ~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~----~~~~~~l~~~l~~l~~~~~v 166 (348)
+++++|+|||+||++++...|...++.|.+ +|+|+++|+||||.|+.+.....+. +.+++++.++++.++.. ++
T Consensus 101 ~~~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~-~~ 178 (402)
T PLN02894 101 SKEDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLS-NF 178 (402)
T ss_pred CCCCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCC-Ce
Confidence 345678999999999999999999999988 5999999999999997543222222 23567788888888887 99
Q ss_pred EEEEECHHHHHHHHHHHhCCcccceEEEecccccC
Q 018930 167 ILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (348)
+|+||||||.+|+.+|.++|++|+++|++++....
T Consensus 179 ~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 179 ILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred EEEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 99999999999999999999999999999886543
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=1.9e-28 Score=207.70 Aligned_cols=243 Identities=18% Similarity=0.179 Sum_probs=151.9
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHhhhHH-HHHHHHhhcCCCcEEEEEEC
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKP-LLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~-l~~~l~~l~~~~~v~lvGhS 172 (348)
+|+|||+||++++...|..+++.|. +||+|+++|+||+|.|+.+.. ...++++.+++ +..+++.++.+ +++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIE-PFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCC-eEEEEEec
Confidence 4789999999999999999999998 589999999999999965432 45788899988 77788888776 99999999
Q ss_pred HHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhc-chhhhhhh----hhhhhhcCCCCCCCC-chhhHHHh
Q 018930 173 SGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELG-SAERFMQE----SQFLIYGNGKDKPPT-GFMFEKQQ 246 (348)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~ 246 (348)
+||.+++.+|.++|++|.++|++++.................. ....+... ............... ........
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQA 158 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHH
Confidence 9999999999999999999999987643221100000000000 00000000 000000000000000 00000000
Q ss_pred hhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCC
Q 018930 247 MKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSD 326 (348)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~g 326 (348)
+.......... ....................+ ...++|+++|+|++|..++ +..+.+.+..++.++++++++|
T Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~g 231 (251)
T TIGR03695 159 LRAKRLANNPE-GLAKMLRATGLGKQPSLWPKL-----QALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAG 231 (251)
T ss_pred HHHhcccccch-HHHHHHHHhhhhcccchHHHh-----hCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCC
Confidence 11000011111 111111110000000011111 1235999999999998774 5667788888999999999999
Q ss_pred CCCCccChHHHHHHHHHHhc
Q 018930 327 HCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 327 H~~~~e~p~~~~~~i~~fl~ 346 (348)
|++++|+|+++++.|.+|++
T Consensus 232 H~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 232 HNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCcCccChHHHHHHHHHHhC
Confidence 99999999999999999984
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=1.6e-28 Score=218.92 Aligned_cols=260 Identities=12% Similarity=0.136 Sum_probs=156.5
Q ss_pred cCCeeeeeeecC----CCCceEEEecCCCCCcc-----------cHHHHH---HHHHhCCCeEEEeCCCC--CCCCCCC-
Q 018930 81 SNGKQDTNILEN----IQYKKFVLIHGEGFGAW-----------CWYKTV---ASLEEVGLIPTALDLKG--SGIDLSD- 139 (348)
Q Consensus 81 ~~g~~~~~~~~~----~~~~~vvllHG~~~~~~-----------~~~~~~---~~L~~~G~~vi~~D~~G--~G~S~~~- 139 (348)
.+|.+++|...+ .++++|||+||++++.. .|..++ ..|..++|+|+++|+|| ||.|...
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 345566665433 34679999999999763 377776 25655679999999999 5554321
Q ss_pred --C--------CCCCChHhhhHHHHHHHHhhcCCCc-EEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCC--h
Q 018930 140 --T--------NSVTTLAEYSKPLLDYLENLLEDEK-VILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR--P 206 (348)
Q Consensus 140 --~--------~~~~~~~~~~~~l~~~l~~l~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~--~ 206 (348)
+ ...++++++++++.+++++++++ + ++|+||||||++++.+|.++|++|+++|++++........ .
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE-QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAF 171 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHH
Confidence 1 12478999999999999999997 7 9999999999999999999999999999999875433211 0
Q ss_pred hhHHHHhhcchh-----------------hhhhhhhhhh----------hcCCCCCC--CC-------chhhHHHhhhhh
Q 018930 207 FDVFAEELGSAE-----------------RFMQESQFLI----------YGNGKDKP--PT-------GFMFEKQQMKGL 250 (348)
Q Consensus 207 ~~~~~~~~~~~~-----------------~~~~~~~~~~----------~~~~~~~~--~~-------~~~~~~~~~~~~ 250 (348)
............ .......... +....... +. ............
T Consensus 172 ~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
T TIGR01392 172 NEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDK 251 (351)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHH
Confidence 000000000000 0000000000 00000000 00 000000000000
Q ss_pred hccCCChHHHHHHHHhcCCCCCC----cccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEE-----E
Q 018930 251 YFNQSPSKDVALAMASMRPTPLG----PIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVY-----K 321 (348)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~-----~ 321 (348)
+...............+...+.. ...+. ...+++|+|+|+|++|.++|++..+.+.+.+|+++++ +
T Consensus 252 ~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~-----l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i 326 (351)
T TIGR01392 252 FVDRFDANSYLYLTRALDTHDLGRGRGSLTEA-----LSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEI 326 (351)
T ss_pred HHhhcCcchHHHHHHHHHhcCCcCCCCCHHHH-----HhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEe
Confidence 00000011111111111111110 01111 1123589999999999999999999999999988765 5
Q ss_pred ecCCCCCCCccChHHHHHHHHHHhc
Q 018930 322 IKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 322 i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
++++||++++|+|++|++.|.+||+
T Consensus 327 ~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 327 ESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCCCCcchhhcCHHHHHHHHHHHhC
Confidence 6789999999999999999999985
No 36
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=9.7e-28 Score=215.48 Aligned_cols=257 Identities=11% Similarity=0.130 Sum_probs=155.9
Q ss_pred CCeeeeeeecCC----CCceEEEecCCCCCccc-------------HHHHHH---HHHhCCCeEEEeCCCCC-CCCCCCC
Q 018930 82 NGKQDTNILENI----QYKKFVLIHGEGFGAWC-------------WYKTVA---SLEEVGLIPTALDLKGS-GIDLSDT 140 (348)
Q Consensus 82 ~g~~~~~~~~~~----~~~~vvllHG~~~~~~~-------------~~~~~~---~L~~~G~~vi~~D~~G~-G~S~~~~ 140 (348)
+|..++|...+. ++|+|||+||++++... |..++. .|...+|+||++|++|+ |.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 344455554321 36899999999999985 666652 34334799999999983 5453221
Q ss_pred C-------------CCCChHhhhHHHHHHHHhhcCCCc-EEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCCh
Q 018930 141 N-------------SVTTLAEYSKPLLDYLENLLEDEK-VILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRP 206 (348)
Q Consensus 141 ~-------------~~~~~~~~~~~l~~~l~~l~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 206 (348)
. ..++++++++++.+++++++++ + ++|+||||||.+++.+|.++|++|+++|++++.........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 189 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT-RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNI 189 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC-CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHH
Confidence 0 1579999999999999999997 7 59999999999999999999999999999998654322100
Q ss_pred --hhHHHHhhcchhh------------------hhhhh-------h-hh--hhcCCCCCCCC----chhh-HHHhh---h
Q 018930 207 --FDVFAEELGSAER------------------FMQES-------Q-FL--IYGNGKDKPPT----GFMF-EKQQM---K 248 (348)
Q Consensus 207 --~~~~~~~~~~~~~------------------~~~~~-------~-~~--~~~~~~~~~~~----~~~~-~~~~~---~ 248 (348)
............. ..+.. . .. .+......... .... ....+ .
T Consensus 190 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~ 269 (379)
T PRK00175 190 AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQG 269 (379)
T ss_pred HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHH
Confidence 0000000000000 00000 0 00 00000000000 0000 00000 0
Q ss_pred hhhccCCChHHHHHHHHhcCCCC--------CCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCC---
Q 018930 249 GLYFNQSPSKDVALAMASMRPTP--------LGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPE--- 317 (348)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~--- 317 (348)
..+...............+...+ ....+.. +++|+|+|+|++|.++|++..+.+.+.++++
T Consensus 270 ~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~--------I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~ 341 (379)
T PRK00175 270 DKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALAR--------IKARFLVVSFTSDWLFPPARSREIVDALLAAGAD 341 (379)
T ss_pred HHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhc--------CCCCEEEEEECCccccCHHHHHHHHHHHHhcCCC
Confidence 00011111111111111111111 1112222 3489999999999999999999999999887
Q ss_pred -cEEEec-CCCCCCCccChHHHHHHHHHHhcC
Q 018930 318 -GVYKIK-GSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 318 -~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
++++++ ++||++++|+|++|++.|.+||+.
T Consensus 342 ~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 342 VSYAEIDSPYGHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred eEEEEeCCCCCchhHhcCHHHHHHHHHHHHHh
Confidence 677775 899999999999999999999963
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=6.7e-27 Score=210.77 Aligned_cols=248 Identities=18% Similarity=0.205 Sum_probs=157.2
Q ss_pred CCeeeeeee-cCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh
Q 018930 82 NGKQDTNIL-ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL 160 (348)
Q Consensus 82 ~g~~~~~~~-~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l 160 (348)
++..++|.. +++++++|||+||++++...|..++..|.+. |+|+++|+||||.|... ....+++++++++.++++.+
T Consensus 117 ~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~-~~~~~~~~~~~~~~~~~~~~ 194 (371)
T PRK14875 117 GGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKA-VGAGSLDELAAAVLAFLDAL 194 (371)
T ss_pred cCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCC-CCCCCHHHHHHHHHHHHHhc
Confidence 344455443 3455789999999999999999999999884 99999999999998543 34568999999999999999
Q ss_pred cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcc---hhhhhhhhhhhhhcCCCCCCC
Q 018930 161 LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGS---AERFMQESQFLIYGNGKDKPP 237 (348)
Q Consensus 161 ~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 237 (348)
+.. +++|+|||+||.+++.+|..+|+++.++|++++........ ..+...... ...+....... ..... .
T Consensus 195 ~~~-~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~ 267 (371)
T PRK14875 195 GIE-RAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN--GDYIDGFVAAESRRELKPVLELL-FADPA---L 267 (371)
T ss_pred CCc-cEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc--hhHHHHhhcccchhHHHHHHHHH-hcChh---h
Confidence 987 99999999999999999999999999999998764322110 011000000 00000000000 00000 0
Q ss_pred CchhhHHHhhhhhhccCCChHHHHHHHHh-cCC-CCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC
Q 018930 238 TGFMFEKQQMKGLYFNQSPSKDVALAMAS-MRP-TPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP 315 (348)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~ 315 (348)
........... ................. +.. .........+ ...++|+++++|++|.++|++..+.+ .+
T Consensus 268 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~i~~Pvlii~g~~D~~vp~~~~~~l---~~ 338 (371)
T PRK14875 268 VTRQMVEDLLK-YKRLDGVDDALRALADALFAGGRQRVDLRDRL-----ASLAIPVLVIWGEQDRIIPAAHAQGL---PD 338 (371)
T ss_pred CCHHHHHHHHH-HhccccHHHHHHHHHHHhccCcccchhHHHHH-----hcCCCCEEEEEECCCCccCHHHHhhc---cC
Confidence 00000000000 00000000000000010 000 0000000111 11259999999999999998876544 34
Q ss_pred CCcEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 316 PEGVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 316 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
+.++.+++++||++++++|+++++.|.+|++.
T Consensus 339 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 339 GVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 68999999999999999999999999999975
No 38
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=4.8e-26 Score=196.22 Aligned_cols=258 Identities=18% Similarity=0.186 Sum_probs=163.5
Q ss_pred cccCCeeeeeee--cCCCC-ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCC-CCCCCCCChHhhhHHHH
Q 018930 79 SLSNGKQDTNIL--ENIQY-KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDL-SDTNSVTTLAEYSKPLL 154 (348)
Q Consensus 79 ~~~~g~~~~~~~--~~~~~-~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~l~ 154 (348)
...+|..+.+.. ...+. .+||++||.+.+..-|..++..|..+||.|+++|+||||.|. .......++.++.+|+.
T Consensus 15 ~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~ 94 (298)
T COG2267 15 TGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLD 94 (298)
T ss_pred ecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHH
Confidence 344666665443 22222 689999999999999999999999999999999999999997 44555567999999999
Q ss_pred HHHHhhc---CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcC
Q 018930 155 DYLENLL---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGN 231 (348)
Q Consensus 155 ~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (348)
.+++... .+.+++|+||||||.+++.++.+++.+|.++|+.+|...... .....................+....
T Consensus 95 ~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~--~~~~~~~~~~~~~~~~~~~p~~~~~~ 172 (298)
T COG2267 95 AFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG--AILRLILARLALKLLGRIRPKLPVDS 172 (298)
T ss_pred HHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh--hHHHHHHHHHhcccccccccccccCc
Confidence 9999875 346999999999999999999999999999999999865543 00000000000000000000000000
Q ss_pred CC--CCCCCchhhHHHhhhhhh------ccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCC
Q 018930 232 GK--DKPPTGFMFEKQQMKGLY------FNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALS 303 (348)
Q Consensus 232 ~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp 303 (348)
.. ........-++....... ................. ... .......++|+|+++|++|.+++
T Consensus 173 ~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~-~~~--------~~~~~~~~~PvLll~g~~D~vv~ 243 (298)
T COG2267 173 NLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR-VPA--------LRDAPAIALPVLLLQGGDDRVVD 243 (298)
T ss_pred ccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc-ccc--------hhccccccCCEEEEecCCCcccc
Confidence 00 000000000111111111 11111111111222211 001 11112235899999999999999
Q ss_pred -HHHHHHHHHhC--CCCcEEEecCCCCCCCccC-h--HHHHHHHHHHhcC
Q 018930 304 -PDVQEKLVREN--PPEGVYKIKGSDHCPFFSK-P--QSLHKILVEIAQI 347 (348)
Q Consensus 304 -~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~-p--~~~~~~i~~fl~~ 347 (348)
.+...++.+.. ++.++++++|+.|.++.|. . +++.+.+.+|+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 244 NVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred CcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 67777776665 5678999999999999875 4 6788888888863
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=8.4e-26 Score=197.79 Aligned_cols=119 Identities=13% Similarity=0.059 Sum_probs=96.0
Q ss_pred ccCCeeeeeeecC-CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHhhhHHHHHHH
Q 018930 80 LSNGKQDTNILEN-IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYL 157 (348)
Q Consensus 80 ~~~g~~~~~~~~~-~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l 157 (348)
..+|.+++|...+ .++++|||+||++++...+ .+...+...+|+|+++|+||||.|+.+.. ..++.+++++++..++
T Consensus 11 ~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~ 89 (306)
T TIGR01249 11 VSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLR 89 (306)
T ss_pred cCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence 3457777765543 4478899999988776654 34444544579999999999999975432 3467889999999999
Q ss_pred HhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 158 ENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 158 ~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
++++.+ +++++||||||.+++.++.++|++|+++|++++...
T Consensus 90 ~~l~~~-~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 90 EKLGIK-NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHcCCC-CEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 999987 999999999999999999999999999999987654
No 40
>PLN02511 hydrolase
Probab=99.94 E-value=2.9e-26 Score=205.93 Aligned_cols=250 Identities=12% Similarity=0.102 Sum_probs=148.5
Q ss_pred cccCCeeeeeee-------cCCCCceEEEecCCCCCccc-H-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhh
Q 018930 79 SLSNGKQDTNIL-------ENIQYKKFVLIHGEGFGAWC-W-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEY 149 (348)
Q Consensus 79 ~~~~g~~~~~~~-------~~~~~~~vvllHG~~~~~~~-~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~ 149 (348)
...||..+.+.+ .+..+|+||++||++++... | ..++..+.++||+|+++|+||||.|+..... .....+
T Consensus 77 ~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~-~~~~~~ 155 (388)
T PLN02511 77 RTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ-FYSASF 155 (388)
T ss_pred ECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC-EEcCCc
Confidence 344665655422 12457899999999887754 5 4577777778999999999999999653222 234567
Q ss_pred hHHHHHHHHhhcC---CCcEEEEEECHHHHHHHHHHHhCCcc--cceEEEecccccCCCCChhhHHHHhhc-ch-hhhhh
Q 018930 150 SKPLLDYLENLLE---DEKVILVGHSSGGACVSYALEHFPQK--ISKAIFLCATMVSDGQRPFDVFAEELG-SA-ERFMQ 222 (348)
Q Consensus 150 ~~~l~~~l~~l~~---~~~v~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~ 222 (348)
++|+.++++++.. ..+++++||||||.+++.++.++|++ |.++++++++..... ....+..... .. ..+..
T Consensus 156 ~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~--~~~~~~~~~~~~y~~~~~~ 233 (388)
T PLN02511 156 TGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVI--ADEDFHKGFNNVYDKALAK 233 (388)
T ss_pred hHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHH--HHHHHhccHHHHHHHHHHH
Confidence 7888888888764 13899999999999999999999987 888888876542100 0000000000 00 00000
Q ss_pred hhhhhh------hcCCCCCC--------CCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCC
Q 018930 223 ESQFLI------YGNGKDKP--------PTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGT 288 (348)
Q Consensus 223 ~~~~~~------~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (348)
...... ........ .....++ +.+...........++ +...+....+.. ++
T Consensus 234 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd-~~~t~~~~gf~~~~~y------y~~~s~~~~L~~--------I~ 298 (388)
T PLN02511 234 ALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFD-DGLTRVSFGFKSVDAY------YSNSSSSDSIKH--------VR 298 (388)
T ss_pred HHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHH-HhhhhhcCCCCCHHHH------HHHcCchhhhcc--------CC
Confidence 000000 00000000 0000000 0000000000000000 000111112222 35
Q ss_pred cceEEEEeCCCCCCCHHHH-HHHHHhCCCCcEEEecCCCCCCCccChHH------HHHHHHHHhc
Q 018930 289 GRRFFIQTLDDRALSPDVQ-EKLVRENPPEGVYKIKGSDHCPFFSKPQS------LHKILVEIAQ 346 (348)
Q Consensus 289 ~Pvl~i~G~~D~~vp~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~ 346 (348)
+|+|+|+|++|+++|.+.. ..+.+.+|++++++++++||+.++|+|+. +.+.|.+|++
T Consensus 299 vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 299 VPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred CCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHH
Confidence 9999999999999998764 45677789999999999999999999976 4788888875
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.94 E-value=9.8e-26 Score=232.24 Aligned_cols=240 Identities=15% Similarity=0.189 Sum_probs=153.3
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC-------CCCCChHhhhHHHHHHHHhhcCCCcE
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT-------NSVTTLAEYSKPLLDYLENLLEDEKV 166 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~l~~~~~v 166 (348)
++++|||+||++++...|..++..|.+ +|+|+++|+||||.|+... ...++++++++++.+++++++.+ ++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~-~v 1447 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG-KV 1447 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC-CE
Confidence 468999999999999999999999987 4999999999999996432 23568999999999999999987 99
Q ss_pred EEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhh-cchhhhhhh--hhhhh---hcCC-CCCCCCc
Q 018930 167 ILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEEL-GSAERFMQE--SQFLI---YGNG-KDKPPTG 239 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~---~~~~-~~~~~~~ 239 (348)
+|+||||||.+++.++.++|++|+++|++++.......... ...... ......... ...+. +... .......
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 1526 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVAR-KIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNH 1526 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHH-HHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccC
Confidence 99999999999999999999999999999875432211110 000000 000000000 00000 0000 0000000
Q ss_pred hhhHHHhhhhhhccCCChHHHHHHHHhc---CCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCC
Q 018930 240 FMFEKQQMKGLYFNQSPSKDVALAMASM---RPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPP 316 (348)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~ 316 (348)
......+...+... ...........+ ...+....+..+ ++|+|+|+|++|..++ +..+.+.+.+++
T Consensus 1527 -~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~dl~~~L~~I--------~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~ 1595 (1655)
T PLN02980 1527 -PHFNKIVASRLLHK-DVPSLAKLLSDLSIGRQPSLWEDLKQC--------DTPLLLVVGEKDVKFK-QIAQKMYREIGK 1595 (1655)
T ss_pred -HHHHHHHHHHHhcC-CHHHHHHHHHHhhhcccchHHHHHhhC--------CCCEEEEEECCCCccH-HHHHHHHHHccc
Confidence 00000011111111 111111111111 111111222222 4899999999999875 556677777665
Q ss_pred ------------CcEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 317 ------------EGVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 317 ------------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
+++++++++||++++|+|+++++.|.+||+.
T Consensus 1596 a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1596 SKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred cccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 4899999999999999999999999999963
No 42
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.94 E-value=1.9e-25 Score=183.53 Aligned_cols=241 Identities=15% Similarity=0.162 Sum_probs=159.1
Q ss_pred CceEEEecCCCCCc-ccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc-----CCCcEEE
Q 018930 95 YKKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-----EDEKVIL 168 (348)
Q Consensus 95 ~~~vvllHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-----~~~~v~l 168 (348)
.-.|+++||++... +.|..++..|+..||.|+++|++|||.|+.-.....+++..++|+..+++... .+-+..|
T Consensus 54 r~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL 133 (313)
T KOG1455|consen 54 RGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFL 133 (313)
T ss_pred ceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeee
Confidence 34799999999887 68888999999999999999999999999777777899999999999998642 2248999
Q ss_pred EEECHHHHHHHHHHHhCCcccceEEEecccccCCCCCh-hhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhh
Q 018930 169 VGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRP-FDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQM 247 (348)
Q Consensus 169 vGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (348)
+||||||++++.++.++|+...++|+++|......... .............++..+. ......... ...-++...
T Consensus 134 ~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk-~vp~~d~~~---~~~kdp~~r 209 (313)
T KOG1455|consen 134 FGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWK-IVPTKDIID---VAFKDPEKR 209 (313)
T ss_pred eecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCcee-ecCCccccc---cccCCHHHH
Confidence 99999999999999999999999999999765443321 1112222222221222222 111110000 000011111
Q ss_pred hhhhccCC---ChHHHHHHHHhcC-CCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC--CCcEEE
Q 018930 248 KGLYFNQS---PSKDVALAMASMR-PTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP--PEGVYK 321 (348)
Q Consensus 248 ~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~--~~~~~~ 321 (348)
.....+.. ...........++ ..+....+.++ ++|.+++||+.|.++.++..+.+++..+ +.++.+
T Consensus 210 ~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~v--------tvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKl 281 (313)
T KOG1455|consen 210 KILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEV--------TVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKL 281 (313)
T ss_pred HHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccc--------cccEEEEecCCCcccCcHHHHHHHHhccCCCCceec
Confidence 11111110 0111111111111 11222223333 4899999999999999999999999874 669999
Q ss_pred ecCCCCCCCc-c---ChHHHHHHHHHHhcC
Q 018930 322 IKGSDHCPFF-S---KPQSLHKILVEIAQI 347 (348)
Q Consensus 322 i~~~gH~~~~-e---~p~~~~~~i~~fl~~ 347 (348)
+||.-|.++. | +-+.|...|.+||+.
T Consensus 282 YpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 282 YPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred cccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 9999999886 3 335677888888864
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.94 E-value=2.6e-25 Score=212.24 Aligned_cols=252 Identities=18% Similarity=0.151 Sum_probs=153.8
Q ss_pred cCCeeeeeee-cCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC-CCCCChHhhhHHHHHHHH
Q 018930 81 SNGKQDTNIL-ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT-NSVTTLAEYSKPLLDYLE 158 (348)
Q Consensus 81 ~~g~~~~~~~-~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~l~ 158 (348)
.+|..++|+. ++.++|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|+.+. ...++++++++|+.++++
T Consensus 10 ~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~ 88 (582)
T PRK05855 10 SDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLAD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVID 88 (582)
T ss_pred eCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 4677777554 445678999999999999999999999954 7999999999999997533 346799999999999999
Q ss_pred hhcCCCcEEEEEECHHHHHHHHHHHh--CCcccceEEEecccccCCCCChhhHHHHhh---------cchhhhhhhhhhh
Q 018930 159 NLLEDEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMVSDGQRPFDVFAEEL---------GSAERFMQESQFL 227 (348)
Q Consensus 159 ~l~~~~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 227 (348)
+++...+++|+||||||.+++.++.. .++++..++.++++.... ......... .............
T Consensus 89 ~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (582)
T PRK05855 89 AVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH---VGFWLRSGLRRPTPRRLARALGQLLRSWYIY 165 (582)
T ss_pred HhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHH---HHHHHhhcccccchhhhhHHHHHHhhhHHHH
Confidence 99876459999999999999888865 234555555444322110 000000000 0000000000000
Q ss_pred hhcCCCCCCCCchh-hHHHhhhh---hhccCCCh------------HHHHHHHHhcCCCCCCcccccccCCcCccCCcce
Q 018930 228 IYGNGKDKPPTGFM-FEKQQMKG---LYFNQSPS------------KDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRR 291 (348)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv 291 (348)
.... .......+. ........ ........ ............ ..........++|+
T Consensus 166 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~P~ 236 (582)
T PRK05855 166 LFHL-PVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIR--------SLSRPRERYTDVPV 236 (582)
T ss_pred HHhC-CCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhh--------hhccCccCCccCce
Confidence 0000 000000000 00000000 00000000 000000000000 00000112246999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 292 FFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 292 l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
++|+|++|.++|++..+.+.+.+++.++++++ +||++++|+|+++.+.|.+|+.
T Consensus 237 lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 290 (582)
T PRK05855 237 QLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVD 290 (582)
T ss_pred EEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHH
Confidence 99999999999999999988888888888887 6999999999999999999986
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.93 E-value=1.8e-24 Score=190.62 Aligned_cols=255 Identities=13% Similarity=0.139 Sum_probs=151.7
Q ss_pred cCCeeeeeee-c-CCCCceEEEecCCCCCcc-cH-------------------------HHHHHHHHhCCCeEEEeCCCC
Q 018930 81 SNGKQDTNIL-E-NIQYKKFVLIHGEGFGAW-CW-------------------------YKTVASLEEVGLIPTALDLKG 132 (348)
Q Consensus 81 ~~g~~~~~~~-~-~~~~~~vvllHG~~~~~~-~~-------------------------~~~~~~L~~~G~~vi~~D~~G 132 (348)
.+|..+.++. . +..+.+||++||++++.. .| ..+++.|.++||.|+++|+||
T Consensus 5 ~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rG 84 (332)
T TIGR01607 5 KDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQG 84 (332)
T ss_pred CCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccc
Confidence 3566665332 2 234559999999999886 21 468999999999999999999
Q ss_pred CCCCCCCC---CCCCChHhhhHHHHHHHHhhcC-----------------------CCcEEEEEECHHHHHHHHHHHhCC
Q 018930 133 SGIDLSDT---NSVTTLAEYSKPLLDYLENLLE-----------------------DEKVILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 133 ~G~S~~~~---~~~~~~~~~~~~l~~~l~~l~~-----------------------~~~v~lvGhS~Gg~~a~~~a~~~p 186 (348)
||.|+... ....+++++++|+..+++.... +.+++|+||||||.+++.++..++
T Consensus 85 HG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 85 HGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred cCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 99987432 1224889999999999987421 348999999999999999987654
Q ss_pred c--------ccceEEEecccccCCCC--C---hhhHH-HHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhh-
Q 018930 187 Q--------KISKAIFLCATMVSDGQ--R---PFDVF-AEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLY- 251 (348)
Q Consensus 187 ~--------~v~~lvl~~~~~~~~~~--~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 251 (348)
+ .++++|+++|....... . ..... .........+... +............. .......+.+
T Consensus 165 ~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~---~~~~~~~~~~~~~~-~~~~~~~Dp~~ 240 (332)
T TIGR01607 165 KSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPT---FRISKKIRYEKSPY-VNDIIKFDKFR 240 (332)
T ss_pred cccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCc---ccccCccccccChh-hhhHHhcCccc
Confidence 3 58999988886532110 0 00000 0000000000000 00000000000000 0001111111
Q ss_pred ccCC-ChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC--CCCcEEEecCCCCC
Q 018930 252 FNQS-PSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN--PPEGVYKIKGSDHC 328 (348)
Q Consensus 252 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~--~~~~~~~i~~~gH~ 328 (348)
.... ............... ......+. .++|+|+|+|++|.+++++..+.+.+.. ++.+++++++++|.
T Consensus 241 ~~~~~s~~~~~~l~~~~~~~--~~~~~~i~------~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~ 312 (332)
T TIGR01607 241 YDGGITFNLASELIKATDTL--DCDIDYIP------KDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHV 312 (332)
T ss_pred cCCcccHHHHHHHHHHHHHH--HhhHhhCC------CCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCC
Confidence 1111 111111111110000 00111111 1489999999999999999998888765 56889999999999
Q ss_pred CCccC-hHHHHHHHHHHhcC
Q 018930 329 PFFSK-PQSLHKILVEIAQI 347 (348)
Q Consensus 329 ~~~e~-p~~~~~~i~~fl~~ 347 (348)
++.|. ++++.+.|.+||++
T Consensus 313 i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 313 ITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred CccCCCHHHHHHHHHHHhhC
Confidence 99885 68899999999864
No 45
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.93 E-value=1.2e-24 Score=170.12 Aligned_cols=219 Identities=16% Similarity=0.177 Sum_probs=148.8
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh---cCCCcEEEEEE
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVILVGH 171 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGh 171 (348)
+..|+||||+.++....+.+.++|.++||.|.++.+||||.... ..-..+.++|-+++.+..+.| +.+ .|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e-~fl~t~~~DW~~~v~d~Y~~L~~~gy~-eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPE-DFLKTTPRDWWEDVEDGYRDLKEAGYD-EIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHH-HHhcCCHHHHHHHHHHHHHHHHHcCCC-eEEEEee
Confidence 37999999999999999999999999999999999999997632 223357777777777666665 455 9999999
Q ss_pred CHHHHHHHHHHHhCCcccceEEEecccccCCCCC-hhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhh
Q 018930 172 SSGGACVSYALEHFPQKISKAIFLCATMVSDGQR-PFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGL 250 (348)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (348)
||||.+++.+|.++| ++++|.++++....... ..+.+.. +.+..... .. .+.+.+...
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~-------y~~~~kk~--------e~----k~~e~~~~e 151 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLE-------YFRNAKKY--------EG----KDQEQIDKE 151 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHH-------HHHHhhhc--------cC----CCHHHHHHH
Confidence 999999999999999 99999999976533211 1111111 11100000 00 011111111
Q ss_pred hccC--CChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC--CCcEEEecCCC
Q 018930 251 YFNQ--SPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP--PEGVYKIKGSD 326 (348)
Q Consensus 251 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~--~~~~~~i~~~g 326 (348)
+... .+..........+. .....++.| ..|++++.|.+|.++|.+.+..+.+..- ..++.+++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~--~~~~~~~~I--------~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~Sg 221 (243)
T COG1647 152 MKSYKDTPMTTTAQLKKLIK--DARRSLDKI--------YSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSG 221 (243)
T ss_pred HHHhhcchHHHHHHHHHHHH--HHHhhhhhc--------ccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCC
Confidence 1111 11111111111110 011112222 3799999999999999999999998873 45899999999
Q ss_pred CCCCcc-ChHHHHHHHHHHhc
Q 018930 327 HCPFFS-KPQSLHKILVEIAQ 346 (348)
Q Consensus 327 H~~~~e-~p~~~~~~i~~fl~ 346 (348)
|.+..+ ..+.+.+.|..||+
T Consensus 222 HVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 222 HVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred ceeecchhHHHHHHHHHHHhh
Confidence 998775 56889999999986
No 46
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.93 E-value=2.1e-23 Score=188.19 Aligned_cols=235 Identities=9% Similarity=0.039 Sum_probs=149.5
Q ss_pred ceeeeecccCCeeee-eee-c--CCCCceEEEecCCCCCc-ccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChH
Q 018930 73 RRTLSESLSNGKQDT-NIL-E--NIQYKKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLA 147 (348)
Q Consensus 73 ~~~~~~~~~~g~~~~-~~~-~--~~~~~~vvllHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 147 (348)
.+.+..|..+|..+. +.+ . +++.|+||++||+++.. ..|..+++.|.++||.|+++|+||+|.|.... ...+..
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~-~~~d~~ 246 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK-LTQDSS 246 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-ccccHH
Confidence 457778887885555 322 2 23456777767766654 57888899999999999999999999985422 123444
Q ss_pred hhhHHHHHHHHhh---cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhh
Q 018930 148 EYSKPLLDYLENL---LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQES 224 (348)
Q Consensus 148 ~~~~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (348)
.....+.+++... +.+ ++.++||||||++++.+|..+|++|+++|+++++...... ...... .......
T Consensus 247 ~~~~avld~l~~~~~vd~~-ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~-~~~~~~----~~p~~~~-- 318 (414)
T PRK05077 247 LLHQAVLNALPNVPWVDHT-RVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT-DPKRQQ----QVPEMYL-- 318 (414)
T ss_pred HHHHHHHHHHHhCcccCcc-cEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhc-chhhhh----hchHHHH--
Confidence 5556666677665 334 8999999999999999999999999999999886421100 000000 0000000
Q ss_pred hhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCH
Q 018930 225 QFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSP 304 (348)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~ 304 (348)
..+....+. ..............+.. ....... ...++|+|+|+|++|.++|+
T Consensus 319 ~~la~~lg~-------------------~~~~~~~l~~~l~~~sl-~~~~~l~-------~~i~~PvLiI~G~~D~ivP~ 371 (414)
T PRK05077 319 DVLASRLGM-------------------HDASDEALRVELNRYSL-KVQGLLG-------RRCPTPMLSGYWKNDPFSPE 371 (414)
T ss_pred HHHHHHhCC-------------------CCCChHHHHHHhhhccc-hhhhhhc-------cCCCCcEEEEecCCCCCCCH
Confidence 000000000 00000000000000000 0000000 11248999999999999999
Q ss_pred HHHHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 305 DVQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 305 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
+..+.+.+..++.++++++++ ++++.++++.+.|.+||+
T Consensus 372 ~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~ 410 (414)
T PRK05077 372 EDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLE 410 (414)
T ss_pred HHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHH
Confidence 999999999999999999985 566899999999999986
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.92 E-value=8e-24 Score=176.98 Aligned_cols=240 Identities=16% Similarity=0.173 Sum_probs=158.9
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc----CCCcEE
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL----EDEKVI 167 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~----~~~~v~ 167 (348)
...|+++++||+.++.+.|..+...|... |-.|+++|.|.||.|+. ....+...+++|+..+|+..+ .. +++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~--~~~h~~~~ma~dv~~Fi~~v~~~~~~~-~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPK--ITVHNYEAMAEDVKLFIDGVGGSTRLD-PVV 126 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcc--ccccCHHHHHHHHHHHHHHcccccccC-Cce
Confidence 46799999999999999999999999875 67899999999999864 445679999999999999985 44 999
Q ss_pred EEEECHHH-HHHHHHHHhCCcccceEEEecccccCCCCChhh---HHHHhhcchh---------hhhhhhhhhhhcCCCC
Q 018930 168 LVGHSSGG-ACVSYALEHFPQKISKAIFLCATMVSDGQRPFD---VFAEELGSAE---------RFMQESQFLIYGNGKD 234 (348)
Q Consensus 168 lvGhS~Gg-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 234 (348)
|+|||||| .+++..+...|+.+..+|+++..+...+..... .+........ .............
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~--- 203 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDN--- 203 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcch---
Confidence 99999999 777888888999999999998766432222211 1111110000 0000000000000
Q ss_pred CCCCchhhHHHhhh-----hhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHH
Q 018930 235 KPPTGFMFEKQQMK-----GLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEK 309 (348)
Q Consensus 235 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~ 309 (348)
..+.+....++ ..+........+......+....+....+... -..||+++.|.++..++.+....
T Consensus 204 ---~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~------~~~pvlfi~g~~S~fv~~~~~~~ 274 (315)
T KOG2382|consen 204 ---LVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGP------YTGPVLFIKGLQSKFVPDEHYPR 274 (315)
T ss_pred ---HHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccc------cccceeEEecCCCCCcChhHHHH
Confidence 00000000000 00000111111222222211111111111111 14799999999999999999999
Q ss_pred HHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 310 LVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 310 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
+.+.+|+++++.++++||++++|+|++|.+.|.+|++.
T Consensus 275 ~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 275 MEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred HHHhccchheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999874
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.91 E-value=1.7e-22 Score=173.72 Aligned_cols=226 Identities=10% Similarity=0.085 Sum_probs=133.8
Q ss_pred CCceEEEecCCCC----CcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh-----cCCC
Q 018930 94 QYKKFVLIHGEGF----GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL-----LEDE 164 (348)
Q Consensus 94 ~~~~vvllHG~~~----~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-----~~~~ 164 (348)
++++||++||... +...|..+++.|.++||+|+++|++|||.|+.. ..++.++.+|+.++++.+ +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~---~~~~~~~~~d~~~~~~~l~~~~~g~~- 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE---NLGFEGIDADIAAAIDAFREAAPHLR- 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC---CCCHHHHHHHHHHHHHHHHhhCCCCC-
Confidence 4567888887653 233467788999999999999999999998642 246777788888888776 344
Q ss_pred cEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhh--hhhhhhcCCCCCCCCchhh
Q 018930 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQE--SQFLIYGNGKDKPPTGFMF 242 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 242 (348)
+++++|||+||.+++.+|.. +++|+++|++++.................. ...... +.....+ .+.+
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g--------~~~~ 169 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYL--GQLLSADFWRKLLSG--------EVNL 169 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHH--HHHhChHHHHHhcCC--------CccH
Confidence 79999999999999999865 568999999998754322111111111000 000000 0000000 0000
Q ss_pred H--HHhhhhhhccCCChHHHHHHHHhcCCCCCCc-ccccccCCcCccCCcceEEEEeCCCCCCCHHHH------HHHHHh
Q 018930 243 E--KQQMKGLYFNQSPSKDVALAMASMRPTPLGP-IMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQ------EKLVRE 313 (348)
Q Consensus 243 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~------~~~~~~ 313 (348)
. ...+...+ ............. ....+. ......++|+++++|+.|...+ ... ..+.+.
T Consensus 170 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~ 237 (274)
T TIGR03100 170 GSSLRGLGDAL----------LKARQKGDEVAHGGLAERMK-AGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGA 237 (274)
T ss_pred HHHHHHHHHHH----------HhhhhcCCCcccchHHHHHH-HHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHH
Confidence 0 00010000 0000000000000 000000 0001124899999999999864 222 344444
Q ss_pred C--CCCcEEEecCCCCCCCccC-hHHHHHHHHHHhc
Q 018930 314 N--PPEGVYKIKGSDHCPFFSK-PQSLHKILVEIAQ 346 (348)
Q Consensus 314 ~--~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~ 346 (348)
+ ++++++++++++|++..+. ++++.+.|.+||+
T Consensus 238 l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 238 LEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred hhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 4 7899999999999986655 5999999999985
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.91 E-value=8e-23 Score=180.10 Aligned_cols=237 Identities=12% Similarity=0.111 Sum_probs=130.7
Q ss_pred CCceEEEecCCCCCccc--HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCC---ChHhhhHHHHHHHHhhcCCCcEEE
Q 018930 94 QYKKFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVT---TLAEYSKPLLDYLENLLEDEKVIL 168 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~~l~~~l~~l~~~~~v~l 168 (348)
.+|+||++||++++... +..++..|.++||+|+++|+||||.+.......+ ..+|....+..+.++++.. ++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~~~ 135 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHV-PTAA 135 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCC-CEEE
Confidence 46899999999887554 4568899999999999999999998753222221 2233322233333334554 8999
Q ss_pred EEECHHHHHHHHHHHhCCcc--cceEEEecccccCCCCChhhHHHHhhcc-hhh-hhh----hhhhhhhcCCCCCCCCch
Q 018930 169 VGHSSGGACVSYALEHFPQK--ISKAIFLCATMVSDGQRPFDVFAEELGS-AER-FMQ----ESQFLIYGNGKDKPPTGF 240 (348)
Q Consensus 169 vGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~----~~~~~~~~~~~~~~~~~~ 240 (348)
+||||||.+++.++..+++. +.++|+++++..... ....+...... ... +.. ......... ........
T Consensus 136 vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~ 212 (324)
T PRK10985 136 VGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEA--CSYRMEQGFSRVYQRYLLNLLKANAARKLAAY-PGTLPINL 212 (324)
T ss_pred EEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHH--HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhc-cccccCCH
Confidence 99999999888888776544 889999988653211 00001010000 000 000 000000000 00000000
Q ss_pred h-h----HHHhhhhhhccCC-ChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC
Q 018930 241 M-F----EKQQMKGLYFNQS-PSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN 314 (348)
Q Consensus 241 ~-~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~ 314 (348)
. . ....+.+.+.... .......... ..+....+.. +++|+++|+|++|.+++++....+.+..
T Consensus 213 ~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~---~~~~~~~l~~--------i~~P~lii~g~~D~~~~~~~~~~~~~~~ 281 (324)
T PRK10985 213 AQLKSVRRLREFDDLITARIHGFADAIDYYR---QCSALPLLNQ--------IRKPTLIIHAKDDPFMTHEVIPKPESLP 281 (324)
T ss_pred HHHhcCCcHHHHhhhheeccCCCCCHHHHHH---HCChHHHHhC--------CCCCEEEEecCCCCCCChhhChHHHHhC
Confidence 0 0 0000000110000 0000000000 1111122222 2489999999999999998888777788
Q ss_pred CCCcEEEecCCCCCCCccCh-----HHHHHHHHHHh
Q 018930 315 PPEGVYKIKGSDHCPFFSKP-----QSLHKILVEIA 345 (348)
Q Consensus 315 ~~~~~~~i~~~gH~~~~e~p-----~~~~~~i~~fl 345 (348)
++.++++++++||+.++|.. --..+.+.+|+
T Consensus 282 ~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 282 PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHH
Confidence 89999999999999998742 13445555555
No 50
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.90 E-value=2.2e-22 Score=179.48 Aligned_cols=252 Identities=12% Similarity=0.091 Sum_probs=151.5
Q ss_pred CCceEEEecCCCCCccc-------------HHHHHH---HHHhCCCeEEEeCCCCCCCCCCC-----------C------
Q 018930 94 QYKKFVLIHGEGFGAWC-------------WYKTVA---SLEEVGLIPTALDLKGSGIDLSD-----------T------ 140 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~-------------~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~-----------~------ 140 (348)
+.++||++|++.++... |..++- .|.-.-|.||++|..|-|.|+.+ +
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~ 134 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPY 134 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCcc
Confidence 35799999999886521 555553 34433599999999998753211 1
Q ss_pred ---CCCCChHhhhHHHHHHHHhhcCCCcEE-EEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCC---hhhHHHHh
Q 018930 141 ---NSVTTLAEYSKPLLDYLENLLEDEKVI-LVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR---PFDVFAEE 213 (348)
Q Consensus 141 ---~~~~~~~~~~~~l~~~l~~l~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~ 213 (348)
...+++.++++++..++++++++ ++. ++||||||++++.+|.++|++|.++|++++........ ........
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~lgi~-~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~a 213 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSLGIA-RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEA 213 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHH
Confidence 12378999999999999999997 876 99999999999999999999999999998865443221 11111110
Q ss_pred hcchh-----------------hhhhhhh--------hhhhcCCCC---CCC-C---chhhHH-Hhhhh---hhccCCCh
Q 018930 214 LGSAE-----------------RFMQESQ--------FLIYGNGKD---KPP-T---GFMFEK-QQMKG---LYFNQSPS 257 (348)
Q Consensus 214 ~~~~~-----------------~~~~~~~--------~~~~~~~~~---~~~-~---~~~~~~-~~~~~---~~~~~~~~ 257 (348)
..... ....... .+....... ... . ...+.. ..+.. .+......
T Consensus 214 i~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Da 293 (389)
T PRK06765 214 IRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDA 293 (389)
T ss_pred HHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccCh
Confidence 00000 0000000 000000000 000 0 000000 00000 01111122
Q ss_pred HHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC----CCcEEEecC-CCCCCCcc
Q 018930 258 KDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP----PEGVYKIKG-SDHCPFFS 332 (348)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~----~~~~~~i~~-~gH~~~~e 332 (348)
..+......+...+.......+ ......+++|+|+|+|++|.++|++..+.+.+.++ +++++++++ +||+++++
T Consensus 294 n~~l~l~~a~~~~d~g~~~~dl-~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le 372 (389)
T PRK06765 294 NHWLYLAKAVQLFDAGHGFSSL-EEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVF 372 (389)
T ss_pred hhHHHHHHHHHhcCCccccCCH-HHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhc
Confidence 2222222222222221110000 00011235899999999999999999999998886 688999985 89999999
Q ss_pred ChHHHHHHHHHHhcC
Q 018930 333 KPQSLHKILVEIAQI 347 (348)
Q Consensus 333 ~p~~~~~~i~~fl~~ 347 (348)
+|+++++.|.+||+.
T Consensus 373 ~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 373 DIHLFEKKIYEFLNR 387 (389)
T ss_pred CHHHHHHHHHHHHcc
Confidence 999999999999974
No 51
>PRK11071 esterase YqiA; Provisional
Probab=99.90 E-value=4.5e-22 Score=160.88 Aligned_cols=184 Identities=16% Similarity=0.188 Sum_probs=127.0
Q ss_pred ceEEEecCCCCCcccHHH--HHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEE
Q 018930 96 KKFVLIHGEGFGAWCWYK--TVASLEEV--GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~--~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (348)
|+|||+||++++...|.. +.+.|.+. +|+|+++|+||+| ++.++++.+++++++.+ +++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~-~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGD-PLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 689999999999999984 44666552 6999999999985 35788899999999887 9999999
Q ss_pred CHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhh
Q 018930 172 SSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLY 251 (348)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (348)
||||.+++.+|.++|. ++|+++|+.. ..+.......... .......+.+....+.+
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~-----~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~d-- 124 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVR-----PFELLTDYLGENE--------------NPYTGQQYVLESRHIYD-- 124 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCC-----HHHHHHHhcCCcc--------------cccCCCcEEEcHHHHHH--
Confidence 9999999999999983 4688888533 1111111111000 00000001111111111
Q ss_pred ccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCc
Q 018930 252 FNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFF 331 (348)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 331 (348)
...+. .. .+. ..+|+++|+|++|.++|.+.+..+.+. ++.++++|++|.+
T Consensus 125 ------------~~~~~---~~----~i~------~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f-- 174 (190)
T PRK11071 125 ------------LKVMQ---ID----PLE------SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAF-- 174 (190)
T ss_pred ------------HHhcC---Cc----cCC------ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcch--
Confidence 01111 11 111 137899999999999999999998884 5777889999987
Q ss_pred cChHHHHHHHHHHhc
Q 018930 332 SKPQSLHKILVEIAQ 346 (348)
Q Consensus 332 e~p~~~~~~i~~fl~ 346 (348)
+..+++.+.|.+|++
T Consensus 175 ~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 175 VGFERYFNQIVDFLG 189 (190)
T ss_pred hhHHHhHHHHHHHhc
Confidence 555889999999985
No 52
>PRK13604 luxD acyl transferase; Provisional
Probab=99.90 E-value=1.8e-21 Score=164.88 Aligned_cols=221 Identities=13% Similarity=0.038 Sum_probs=134.6
Q ss_pred eecccCCeeeeeeecC------CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCC-CCCCCCCCCCCChHhh
Q 018930 77 SESLSNGKQDTNILEN------IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDTNSVTTLAEY 149 (348)
Q Consensus 77 ~~~~~~g~~~~~~~~~------~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~~~~~~~~~ 149 (348)
..-..+|..+.-|+.. .+.++||++||++.....+..+++.|.++||.|+.||++|+ |.|+... ...++...
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~-~~~t~s~g 91 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI-DEFTMSIG 91 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc-ccCccccc
Confidence 3344567776643322 23468999999999887799999999999999999999987 9986532 22233334
Q ss_pred hHHHHH---HHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhh
Q 018930 150 SKPLLD---YLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQF 226 (348)
Q Consensus 150 ~~~l~~---~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (348)
..|+.. +++..+.+ ++.|+||||||.+|+.+|... .++++|+.+|+... .+.+........ .
T Consensus 92 ~~Dl~aaid~lk~~~~~-~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l-----~d~l~~~~~~~~--~----- 156 (307)
T PRK13604 92 KNSLLTVVDWLNTRGIN-NLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL-----RDTLERALGYDY--L----- 156 (307)
T ss_pred HHHHHHHHHHHHhcCCC-ceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH-----HHHHHHhhhccc--c-----
Confidence 555544 44444444 899999999999998777643 49999998886542 222222111100 0
Q ss_pred hhhcCCCCCCCCc-----hhh-HHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCC
Q 018930 227 LIYGNGKDKPPTG-----FMF-EKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDR 300 (348)
Q Consensus 227 ~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~ 300 (348)
.......+.. ..+ ...++.. .............+.+. ..++|+|+|||++|.
T Consensus 157 ---~~p~~~lp~~~d~~g~~l~~~~f~~~--------------~~~~~~~~~~s~i~~~~-----~l~~PvLiIHG~~D~ 214 (307)
T PRK13604 157 ---SLPIDELPEDLDFEGHNLGSEVFVTD--------------CFKHGWDTLDSTINKMK-----GLDIPFIAFTANNDS 214 (307)
T ss_pred ---cCcccccccccccccccccHHHHHHH--------------HHhcCccccccHHHHHh-----hcCCCEEEEEcCCCC
Confidence 0000000000 000 0011100 00000000011111111 013899999999999
Q ss_pred CCCHHHHHHHHHhCC--CCcEEEecCCCCCCCccChHH
Q 018930 301 ALSPDVQEKLVRENP--PEGVYKIKGSDHCPFFSKPQS 336 (348)
Q Consensus 301 ~vp~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~ 336 (348)
+||.+..+.+.+.++ +.++++++|++|.+ .|++-.
T Consensus 215 lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l-~~~~~~ 251 (307)
T PRK13604 215 WVKQSEVIDLLDSIRSEQCKLYSLIGSSHDL-GENLVV 251 (307)
T ss_pred ccCHHHHHHHHHHhccCCcEEEEeCCCcccc-CcchHH
Confidence 999999999999875 68999999999986 455543
No 53
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.89 E-value=1.3e-23 Score=161.49 Aligned_cols=242 Identities=12% Similarity=0.068 Sum_probs=161.9
Q ss_pred cCCeeeeeeecCCCCceEEEecCCCCCcc-cHHHHHHHHHhC-CCeEEEeCCCCCCCCCCCCC--CCCChHhhhHHHHHH
Q 018930 81 SNGKQDTNILENIQYKKFVLIHGEGFGAW-CWYKTVASLEEV-GLIPTALDLKGSGIDLSDTN--SVTTLAEYSKPLLDY 156 (348)
Q Consensus 81 ~~g~~~~~~~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~l~~~ 156 (348)
.+|.++.|...+.+...|++++|..++.+ .|.+.+..|-+. .+.|+++|.||||.|.++.. ...-+...+++..++
T Consensus 28 vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdL 107 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDL 107 (277)
T ss_pred ecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHH
Confidence 46788887766666668999999877766 798888776553 38999999999999965332 223455677888889
Q ss_pred HHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCC
Q 018930 157 LENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKP 236 (348)
Q Consensus 157 l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (348)
++.|... ++.++|||-||..|+.+|+++++.|.++|+.++......... ...........|......-.
T Consensus 108 M~aLk~~-~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~--ma~kgiRdv~kWs~r~R~P~-------- 176 (277)
T KOG2984|consen 108 MEALKLE-PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA--MAFKGIRDVNKWSARGRQPY-------- 176 (277)
T ss_pred HHHhCCC-CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH--HHHhchHHHhhhhhhhcchH--------
Confidence 9999997 999999999999999999999999999999988654332111 01111111111111110000
Q ss_pred CCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCC-CcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC
Q 018930 237 PTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPL-GPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP 315 (348)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~ 315 (348)
......+.+...... --+............+ ...+.++ +||+|+++|+.|++++....-.+....+
T Consensus 177 --e~~Yg~e~f~~~wa~---wvD~v~qf~~~~dG~fCr~~lp~v--------kcPtli~hG~kDp~~~~~hv~fi~~~~~ 243 (277)
T KOG2984|consen 177 --EDHYGPETFRTQWAA---WVDVVDQFHSFCDGRFCRLVLPQV--------KCPTLIMHGGKDPFCGDPHVCFIPVLKS 243 (277)
T ss_pred --HHhcCHHHHHHHHHH---HHHHHHHHhhcCCCchHhhhcccc--------cCCeeEeeCCcCCCCCCCCccchhhhcc
Confidence 000011111110000 0000111111111111 1122333 4999999999999999999888888889
Q ss_pred CCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 316 PEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 316 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
.+++.+++.++|.+++.-+++|++.+.+||+
T Consensus 244 ~a~~~~~peGkHn~hLrya~eFnklv~dFl~ 274 (277)
T KOG2984|consen 244 LAKVEIHPEGKHNFHLRYAKEFNKLVLDFLK 274 (277)
T ss_pred cceEEEccCCCcceeeechHHHHHHHHHHHh
Confidence 9999999999999999999999999999996
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=2.3e-23 Score=174.83 Aligned_cols=211 Identities=19% Similarity=0.177 Sum_probs=128.5
Q ss_pred CeEEEeCCCCCCCCCC---CCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccc
Q 018930 123 LIPTALDLKGSGIDLS---DTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 123 ~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
|+|+++|+||+|.|+. .....++.+++++++..++++++.+ +++++||||||.+++.+|..+|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK-KINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS-SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC-CeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 6899999999999985 5667789999999999999999998 89999999999999999999999999999999852
Q ss_pred ----cCCCCChhh-HHHHhh-cchhh-hhhhhhhhhhcCC----CCCCCCchhhHHHhhhhhhccCCChHHHHH----HH
Q 018930 200 ----VSDGQRPFD-VFAEEL-GSAER-FMQESQFLIYGNG----KDKPPTGFMFEKQQMKGLYFNQSPSKDVAL----AM 264 (348)
Q Consensus 200 ----~~~~~~~~~-~~~~~~-~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 264 (348)
......... .+.... ..... ............. ..................+........... ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNAL 159 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccc
Confidence 000000000 000000 00000 0000000000000 000000000000000000000000000000 00
Q ss_pred HhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHH
Q 018930 265 ASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILV 342 (348)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 342 (348)
......+....... +++|+++++|++|.++|++....+.+.+|+.++++++++||+.++++|+++++.|.
T Consensus 160 ~~~~~~~~~~~l~~--------i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 160 GYFSVWDPSPALSN--------IKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHTT--------TTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccc--------cCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 00000001111111 35999999999999999999999999999999999999999999999999999885
No 55
>PRK10566 esterase; Provisional
Probab=99.87 E-value=9.3e-21 Score=161.20 Aligned_cols=204 Identities=13% Similarity=0.107 Sum_probs=122.3
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCh-------HhhhHHHHHHHHhh---c-C
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTL-------AEYSKPLLDYLENL---L-E 162 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~-------~~~~~~l~~~l~~l---~-~ 162 (348)
..|+||++||++++...|..+++.|.++||.|+++|+||||.+..... ...+ .+..+++.++++.+ + +
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDE-ARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcc-ccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 468999999999999999999999999999999999999997632111 1111 12233343333332 2 2
Q ss_pred -CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchh
Q 018930 163 -DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFM 241 (348)
Q Consensus 163 -~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (348)
.++++++|||+||.+++.++.++|+....++++++... ..+.... +.........
T Consensus 105 ~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--------------~~~~~~~~~~--- 160 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-------TSLARTL--------------FPPLIPETAA--- 160 (249)
T ss_pred CccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-------HHHHHHh--------------cccccccccc---
Confidence 24899999999999999999988864444444443211 0000000 0000000000
Q ss_pred hHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCC-----
Q 018930 242 FEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPP----- 316 (348)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~----- 316 (348)
... ............+......++ .++|+|+++|++|.++|++..+.+.+.++.
T Consensus 161 -~~~-------------~~~~~~~~~~~~~~~~~~~~i-------~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~ 219 (249)
T PRK10566 161 -QQA-------------EFNNIVAPLAEWEVTHQLEQL-------ADRPLLLWHGLADDVVPAAESLRLQQALRERGLDK 219 (249)
T ss_pred -cHH-------------HHHHHHHHHhhcChhhhhhhc-------CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCc
Confidence 000 000000001011111111222 138999999999999999998888886642
Q ss_pred -CcEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 317 -EGVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 317 -~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
.+++.++++||.+. + ...+.+.+||+.
T Consensus 220 ~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 220 NLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred ceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 46678899999863 3 456778888763
No 56
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=5e-20 Score=157.02 Aligned_cols=243 Identities=20% Similarity=0.236 Sum_probs=144.6
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCC--CeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
+|+|+++||++++...|......+.... |+++++|+||||.|. .. .++...+++++..+++.++.. +++++|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDALGLE-KVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCCC-ceEEEEec
Confidence 6699999999999999988444443321 899999999999986 11 345666699999999999987 79999999
Q ss_pred HHHHHHHHHHHhCCcccceEEEecccccCCCC----------ChhhHHHHhhcchhhhhhhhhhhhhcCC-CCCCCCchh
Q 018930 173 SGGACVSYALEHFPQKISKAIFLCATMVSDGQ----------RPFDVFAEELGSAERFMQESQFLIYGNG-KDKPPTGFM 241 (348)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 241 (348)
+||.+++.++.++|+++.++|++++....... .............. ............ .........
T Consensus 97 ~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 174 (282)
T COG0596 97 MGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLD--AAAFAALLAALGLLAALAAAAR 174 (282)
T ss_pred ccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccc--hhhhhhhhhcccccccccccch
Confidence 99999999999999999999999976531100 00000000000000 000000000000 000000000
Q ss_pred hHHHhhhhhhccCCChHHHHHHHHhcC----CCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCC-
Q 018930 242 FEKQQMKGLYFNQSPSKDVALAMASMR----PTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPP- 316 (348)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~- 316 (348)
..... .. ................ ...................++|+++++|++|.+.|......+.+.+++
T Consensus 175 --~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~ 250 (282)
T COG0596 175 --AGLAE-AL-RAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPND 250 (282)
T ss_pred --hcccc-cc-ccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCC
Confidence 00000 00 0000000000000000 000000011000111222358999999999977787766777777885
Q ss_pred CcEEEecCCCCCCCccChHHHHHHHHHHhcC
Q 018930 317 EGVYKIKGSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 317 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
.++++++++||++++++|+.+.+.+.+|++.
T Consensus 251 ~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~~ 281 (282)
T COG0596 251 ARLVVIPGAGHFPHLEAPEAFAAALLAFLER 281 (282)
T ss_pred ceEEEeCCCCCcchhhcHHHHHHHHHHHHhc
Confidence 8999999999999999999999999886653
No 57
>PLN02872 triacylglycerol lipase
Probab=99.87 E-value=1.6e-20 Score=167.47 Aligned_cols=246 Identities=15% Similarity=0.164 Sum_probs=144.5
Q ss_pred CCceEEEecCCCCCcccHH------HHHHHHHhCCCeEEEeCCCCCCCCCC----C-CC---CCCChHhhh-HHHHHHHH
Q 018930 94 QYKKFVLIHGEGFGAWCWY------KTVASLEEVGLIPTALDLKGSGIDLS----D-TN---SVTTLAEYS-KPLLDYLE 158 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~------~~~~~L~~~G~~vi~~D~~G~G~S~~----~-~~---~~~~~~~~~-~~l~~~l~ 158 (348)
++|+|||+||++.++..|. .+...|+++||+|+++|+||+|.|.. . .. ..+++++++ .|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 3679999999999998883 35557888999999999999886532 1 11 246788888 79999998
Q ss_pred hh---cCCCcEEEEEECHHHHHHHHHHHhCCc---ccceEEEecccccCCC-CChhh-HHHH-h-------hcchh----
Q 018930 159 NL---LEDEKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMVSDG-QRPFD-VFAE-E-------LGSAE---- 218 (348)
Q Consensus 159 ~l---~~~~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~-~~~~~-~~~~-~-------~~~~~---- 218 (348)
.+ .. +++++||||+||.+++.++ .+|+ +|+.+++++|...... .+..- .+.. . .+...
T Consensus 153 ~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (395)
T PLN02872 153 YVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFR 230 (395)
T ss_pred HHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCC
Confidence 86 23 4999999999999998655 5676 6888888888754321 11111 1000 0 00000
Q ss_pred -hhhhhh-hhh----------h-hcCCCCCCCCchhhHHHhhhhhhcc---CCChHH-HHHHH----HhcCCCCCCcccc
Q 018930 219 -RFMQES-QFL----------I-YGNGKDKPPTGFMFEKQQMKGLYFN---QSPSKD-VALAM----ASMRPTPLGPIME 277 (348)
Q Consensus 219 -~~~~~~-~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~----~~~~~~~~~~~~~ 277 (348)
..+... ... + .-.+.. . .+....+...+.. ....+. ..+.. ..++..++.....
T Consensus 231 ~~~~~~~~~~~C~~~~~c~~~~~~~~g~~-~----~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n 305 (395)
T PLN02872 231 SDVLVKLLDSICEGHMDCNDLLTSITGTN-C----CFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKN 305 (395)
T ss_pred cHHHHHHHHHHccCchhHHHHHHHHhCCC-c----ccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhh
Confidence 000000 000 0 000000 0 0001111110000 000111 11110 1122222221110
Q ss_pred c-----ccCC--cCccC--CcceEEEEeCCCCCCCHHHHHHHHHhCCC-CcEEEecCCCCCCC---ccChHHHHHHHHHH
Q 018930 278 K-----LSLS--PEKYG--TGRRFFIQTLDDRALSPDVQEKLVRENPP-EGVYKIKGSDHCPF---FSKPQSLHKILVEI 344 (348)
Q Consensus 278 ~-----~~~~--~~~~~--~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~-~~~~~i~~~gH~~~---~e~p~~~~~~i~~f 344 (348)
. ...+ ....+ ++|+++++|++|.+++++..+.+.+.+++ .+++.++++||..+ .+.|+++.+.|.+|
T Consensus 306 ~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~f 385 (395)
T PLN02872 306 LKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQF 385 (395)
T ss_pred HHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHH
Confidence 0 0000 01111 47999999999999999999999999987 58888999999644 48899999999999
Q ss_pred hc
Q 018930 345 AQ 346 (348)
Q Consensus 345 l~ 346 (348)
++
T Consensus 386 L~ 387 (395)
T PLN02872 386 FR 387 (395)
T ss_pred HH
Confidence 86
No 58
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.86 E-value=2.3e-20 Score=170.92 Aligned_cols=234 Identities=15% Similarity=0.073 Sum_probs=140.0
Q ss_pred CCceEEEecCCCCCcccHH-----HHHHHHHhCCCeEEEeCCCCCCCCCCCC-CCCCChHhhhHHHHHHHHhhcCCCcEE
Q 018930 94 QYKKFVLIHGEGFGAWCWY-----KTVASLEEVGLIPTALDLKGSGIDLSDT-NSVTTLAEYSKPLLDYLENLLEDEKVI 167 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~-----~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~l~~l~~~~~v~ 167 (348)
.+++||++||+......|+ .++..|.++||+|+++|++|+|.+.... ...|..+.+.+.+..+++.++.+ +++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~-kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEK-QVN 265 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCC-CeE
Confidence 4689999999999888885 7999999999999999999999885432 12334445566677777777776 999
Q ss_pred EEEECHHHHHHH----HHHHhC-CcccceEEEecccccCCCCChhhHHHHhhc--chhhhhhh-----------h-----
Q 018930 168 LVGHSSGGACVS----YALEHF-PQKISKAIFLCATMVSDGQRPFDVFAEELG--SAERFMQE-----------S----- 224 (348)
Q Consensus 168 lvGhS~Gg~~a~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------~----- 224 (348)
++||||||.++. .++..+ +++|++++++++............+..... .....+.. .
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999852 244454 789999999998866543322222111000 00000000 0
Q ss_pred ------hhhhhcCCCCCCCCchhhHHHhhhhhhccCC--ChHHHHHHHHh-cCCCCCCccccccc----CCcCccCCcce
Q 018930 225 ------QFLIYGNGKDKPPTGFMFEKQQMKGLYFNQS--PSKDVALAMAS-MRPTPLGPIMEKLS----LSPEKYGTGRR 291 (348)
Q Consensus 225 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~Pv 291 (348)
...+........+.. ++ +..+..+.. +.......... +....+. ...+. ......+++|+
T Consensus 346 p~~l~w~~~v~~yl~g~~~~~--fd---ll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~--~G~~~v~g~~~dL~~I~vPv 418 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSPVP--FD---LLFWNSDSTNLPGKMHNFYLRNLYLQNALT--TGGLEVCGVRLDLSKVKVPV 418 (532)
T ss_pred hhhHHHHHHHHHHhcCCCccc--hh---HHHHhccCccchHHHHHHHHHHHHhcCCCc--CCeeEECCEecchhhCCCCE
Confidence 000000000000000 00 000110010 11111111111 1111111 01111 11223346999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccChH
Q 018930 292 FFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKPQ 335 (348)
Q Consensus 292 l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 335 (348)
++|+|++|.++|.+..+.+.+.+++.+.++++++||.+++++|.
T Consensus 419 LvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 419 YIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred EEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 99999999999999999999999999999999999999999874
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.85 E-value=8e-20 Score=162.89 Aligned_cols=247 Identities=13% Similarity=0.081 Sum_probs=138.9
Q ss_pred CceEEEecCCCCCcccH-----HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHH-HHH----HHHhhcCCC
Q 018930 95 YKKFVLIHGEGFGAWCW-----YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKP-LLD----YLENLLEDE 164 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-l~~----~l~~l~~~~ 164 (348)
+++||++||+..+...| ..+++.|.++||+|+++|++|+|.|+. ..++++++.+ +.+ +++..+..
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~~~~~~- 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICRTSKLD- 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 56899999987666554 689999999999999999999997643 2366666533 433 34445555
Q ss_pred cEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCC-hhhHHHHh---------hcchhhhhhhhhhhhhcCCCC
Q 018930 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR-PFDVFAEE---------LGSAERFMQESQFLIYGNGKD 234 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 234 (348)
+++++||||||.+++.++..+|++|+++|+++++....... ........ ............+........
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~ 216 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSL 216 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchh
Confidence 99999999999999999999999999999999876543211 11111000 000000000000000000000
Q ss_pred CCCCchh-----hHHHh------hhhhhccCC--ChHHHHHHHHhc-CCCCC-Ccccc-cccCCcCccCCcceEEEEeCC
Q 018930 235 KPPTGFM-----FEKQQ------MKGLYFNQS--PSKDVALAMASM-RPTPL-GPIME-KLSLSPEKYGTGRRFFIQTLD 298 (348)
Q Consensus 235 ~~~~~~~-----~~~~~------~~~~~~~~~--~~~~~~~~~~~~-~~~~~-~~~~~-~~~~~~~~~~~~Pvl~i~G~~ 298 (348)
....... .+.+. +..++.... ...........+ ..... ...+. .-........++|+++++|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~ 296 (350)
T TIGR01836 217 GYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAER 296 (350)
T ss_pred hhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCC
Confidence 0000000 00000 001111110 111111111100 00000 00000 000001122359999999999
Q ss_pred CCCCCHHHHHHHHHhCCC--CcEEEecCCCCCCCccCh---HHHHHHHHHHhcC
Q 018930 299 DRALSPDVQEKLVRENPP--EGVYKIKGSDHCPFFSKP---QSLHKILVEIAQI 347 (348)
Q Consensus 299 D~~vp~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~ 347 (348)
|.++|++..+.+.+.+++ .++++++ +||..++.++ +++...|.+|++.
T Consensus 297 D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 297 DHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999988864 4566676 7999877654 7889999999864
No 60
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.83 E-value=1.1e-18 Score=142.77 Aligned_cols=233 Identities=13% Similarity=0.091 Sum_probs=155.4
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHH
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (348)
+||-+||.+++...|..+.+.|.+.|+|+|.+++||+|.++.++...++-.+-..-+.++|+.++++++++.+|||.|+-
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGce 116 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCE 116 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchH
Confidence 89999999999999999999999999999999999999998888888999999999999999999988999999999999
Q ss_pred HHHHHHHhCCcccceEEEecccccCCCCChhhHHH-HhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccCC
Q 018930 177 CVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFA-EELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQS 255 (348)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (348)
.|+.+|..+| +.++++++|+............. ........++.. .+. .......++..-+.-.
T Consensus 117 nal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~---~~~----------~~i~~~~y~~iG~KV~ 181 (297)
T PF06342_consen 117 NALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPR---FII----------NAIMYFYYRMIGFKVS 181 (297)
T ss_pred HHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhH---HHH----------HHHHHHHHHHhCeeec
Confidence 9999999986 78999999987655433222110 000000000000 000 0000011111111111
Q ss_pred ChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC--------------------
Q 018930 256 PSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP-------------------- 315 (348)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~-------------------- 315 (348)
.......+...+...++..-.+.+....+ .++|+++++|.+|.++-.+...++...+.
T Consensus 182 ~GeeA~na~r~m~~~df~~q~~~I~~ln~--~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~ 259 (297)
T PF06342_consen 182 DGEEAINAMRSMQNCDFEEQKEYIDKLNK--KPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKIL 259 (297)
T ss_pred ChHHHHHHHHHHHhcCHHHHHHHHHHhcc--CCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHH
Confidence 12222233333333333332222221111 13899999999999987776555543321
Q ss_pred -------CCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 316 -------PEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 316 -------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
....+.+.+.||+.+-.+++-+++.+...++
T Consensus 260 ~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 260 KSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 1124456777999999999999988887663
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.83 E-value=9.8e-20 Score=141.55 Aligned_cols=144 Identities=24% Similarity=0.356 Sum_probs=109.4
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHH
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (348)
+||++||++++...|..+.+.|.++||.|+.+|+||+|.+.. .....++.+++. .+..+. .+++|+|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~-~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG----ADAVERVLADIR--AGYPDP-DRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH----SHHHHHHHHHHH--HHHCTC-CEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch----hHHHHHHHHHHH--hhcCCC-CcEEEEEEccCcH
Confidence 589999999999999999999999999999999999997621 112222222221 111244 4999999999999
Q ss_pred HHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccCCC
Q 018930 177 CVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSP 256 (348)
Q Consensus 177 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (348)
+++.++.+. .+++++|++++... .. .
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~~~----------------~~---------------------------~---------- 99 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPYPD----------------SE---------------------------D---------- 99 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESESSG----------------CH---------------------------H----------
T ss_pred HHHHHhhhc-cceeEEEEecCccc----------------hh---------------------------h----------
Confidence 999999988 78999999998200 00 0
Q ss_pred hHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC-CCcEEEecCCCCC
Q 018930 257 SKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP-PEGVYKIKGSDHC 328 (348)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~-~~~~~~i~~~gH~ 328 (348)
+... ++|+++++|++|..+|.+..+.+.+.++ +.++++++|++|+
T Consensus 100 -------------------~~~~--------~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 -------------------LAKI--------RIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -------------------HTTT--------TSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred -------------------hhcc--------CCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0000 2699999999999999999999888887 5799999999996
No 62
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.83 E-value=2.2e-20 Score=151.08 Aligned_cols=105 Identities=25% Similarity=0.345 Sum_probs=89.9
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc--CCCcEEEE
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL--EDEKVILV 169 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~--~~~~v~lv 169 (348)
..+|.++++||.|.+.-.|..++.+|..+ ..+|+++|+||||++........+.+.++.|+.++++.+- ...+++||
T Consensus 72 t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilV 151 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILV 151 (343)
T ss_pred CCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 47899999999999999999999988764 4678889999999998777777899999999999999974 23589999
Q ss_pred EECHHHHHHHHHHHh--CCcccceEEEeccc
Q 018930 170 GHSSGGACVSYALEH--FPQKISKAIFLCAT 198 (348)
Q Consensus 170 GhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~ 198 (348)
||||||.+|...|.. .|. +.+++.++-.
T Consensus 152 GHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 152 GHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred eccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 999999999887753 465 8899988854
No 63
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.82 E-value=1.2e-18 Score=174.39 Aligned_cols=245 Identities=15% Similarity=0.133 Sum_probs=142.4
Q ss_pred CCceEEEecCCCCCcccHHHH-----HHHHHhCCCeEEEeCCCCCCCCCCCCC-CCCChHhhhHHHHHHHHh---hcCCC
Q 018930 94 QYKKFVLIHGEGFGAWCWYKT-----VASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLEN---LLEDE 164 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~-----~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~---l~~~~ 164 (348)
.+++|||+||++.+...|+.. ++.|.++||+|+++|+ |.++.+.. ...++.+++..+.+.++. +..+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~- 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR- 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC-
Confidence 568999999999999999865 8899999999999994 66544222 235777777777777665 3344
Q ss_pred cEEEEEECHHHHHHHHHHHhC-CcccceEEEecccccCCCCChhhHHHHh------------h--cchhhhhhhhhh---
Q 018930 165 KVILVGHSSGGACVSYALEHF-PQKISKAIFLCATMVSDGQRPFDVFAEE------------L--GSAERFMQESQF--- 226 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~------------~--~~~~~~~~~~~~--- 226 (348)
+++|+||||||.+++.++..+ +++|+++|+++++............... . .....+.....+
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l 221 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQML 221 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhc
Confidence 899999999999999888754 5689999998887543211110100000 0 000000000000
Q ss_pred -----------hhhcCCCCCCCCchhhHHHhhhhhhcc----CCChHHHHHHHHhc---CCCCCCcccccccCCcCccCC
Q 018930 227 -----------LIYGNGKDKPPTGFMFEKQQMKGLYFN----QSPSKDVALAMASM---RPTPLGPIMEKLSLSPEKYGT 288 (348)
Q Consensus 227 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 288 (348)
++....... ...+.+....++.. .............+ .......+.-.-.......++
T Consensus 222 ~p~~~~~~~~~~~~~l~~~~----~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~ 297 (994)
T PRK07868 222 DPVKTAKARVDFLRQLHDRE----ALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADIT 297 (994)
T ss_pred ChhHHHHHHHHHHHhcCchh----hhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCC
Confidence 000000000 00000000010000 00000111111111 000000000000000122335
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHhCCCCcE-EEecCCCCCCCcc---ChHHHHHHHHHHhc
Q 018930 289 GRRFFIQTLDDRALSPDVQEKLVRENPPEGV-YKIKGSDHCPFFS---KPQSLHKILVEIAQ 346 (348)
Q Consensus 289 ~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~-~~i~~~gH~~~~e---~p~~~~~~i~~fl~ 346 (348)
+|+|+|+|++|.++|++..+.+.+.++++++ .+++++||+.++- -++++...|.+||+
T Consensus 298 ~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~ 359 (994)
T PRK07868 298 CPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVK 359 (994)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHH
Confidence 8999999999999999999999999999987 6789999997763 57888899999986
No 64
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.81 E-value=2.7e-18 Score=133.75 Aligned_cols=239 Identities=16% Similarity=0.164 Sum_probs=149.1
Q ss_pred eeeeecccCCeeee-eeecCCCCceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhh
Q 018930 74 RTLSESLSNGKQDT-NILENIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYS 150 (348)
Q Consensus 74 ~~~~~~~~~g~~~~-~~~~~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 150 (348)
..+..|...+..+. .....++...+|++||+-.+.. ....++..|++.|+.++.+|++|.|+|+.. .........+
T Consensus 11 ~~ivi~n~~ne~lvg~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs-f~~Gn~~~ea 89 (269)
T KOG4667|consen 11 QKIVIPNSRNEKLVGLLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS-FYYGNYNTEA 89 (269)
T ss_pred eEEEeccCCCchhhcceeccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc-cccCcccchH
Confidence 34555555444333 4445567789999999988776 345678899999999999999999999652 2223445566
Q ss_pred HHHHHHHHhhcCCCc--EEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhh-cchhhhhhhhhhh
Q 018930 151 KPLLDYLENLLEDEK--VILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEEL-GSAERFMQESQFL 227 (348)
Q Consensus 151 ~~l~~~l~~l~~~~~--v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 227 (348)
+|+..+++++.-..+ -+++|||-||.+++.+|.++++ +.-+|-+++-..... ...+.. .....++....++
T Consensus 90 dDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~-----~I~eRlg~~~l~~ike~Gfi 163 (269)
T KOG4667|consen 90 DDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKN-----GINERLGEDYLERIKEQGFI 163 (269)
T ss_pred HHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhc-----chhhhhcccHHHHHHhCCce
Confidence 999999998853212 4689999999999999999987 777776665433221 111111 1111122222222
Q ss_pred hhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHH
Q 018930 228 IYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQ 307 (348)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~ 307 (348)
-........... +.++.+.+.+ . .+......++. .+||||-+||..|.+||.+.+
T Consensus 164 d~~~rkG~y~~r--vt~eSlmdrL----------------n-td~h~aclkId------~~C~VLTvhGs~D~IVPve~A 218 (269)
T KOG4667|consen 164 DVGPRKGKYGYR--VTEESLMDRL----------------N-TDIHEACLKID------KQCRVLTVHGSEDEIVPVEDA 218 (269)
T ss_pred ecCcccCCcCce--ecHHHHHHHH----------------h-chhhhhhcCcC------ccCceEEEeccCCceeechhH
Confidence 222111111111 1111111111 0 01111111122 259999999999999999999
Q ss_pred HHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHh
Q 018930 308 EKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIA 345 (348)
Q Consensus 308 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 345 (348)
..+++.+|+-++.++||+.|..... ..++.....+|.
T Consensus 219 kefAk~i~nH~L~iIEgADHnyt~~-q~~l~~lgl~f~ 255 (269)
T KOG4667|consen 219 KEFAKIIPNHKLEIIEGADHNYTGH-QSQLVSLGLEFI 255 (269)
T ss_pred HHHHHhccCCceEEecCCCcCccch-hhhHhhhcceeE
Confidence 9999999999999999999986543 344555544443
No 65
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.80 E-value=2.5e-18 Score=139.02 Aligned_cols=207 Identities=16% Similarity=0.149 Sum_probs=142.1
Q ss_pred eeecccCCeeee-eeecCC-C-CceEEEecCCCCCcccHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHhhhH
Q 018930 76 LSESLSNGKQDT-NILENI-Q-YKKFVLIHGEGFGAWCWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSK 151 (348)
Q Consensus 76 ~~~~~~~g~~~~-~~~~~~-~-~~~vvllHG~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 151 (348)
...++..|..+. .++... . .+++++.||...+......+...|.. -+++|+.+|+.|+|.|+..+.+. .+.+.++
T Consensus 38 ~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-n~y~Di~ 116 (258)
T KOG1552|consen 38 FKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-NLYADIK 116 (258)
T ss_pred EEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-cchhhHH
Confidence 344555565555 444333 3 48999999997777665566666655 25899999999999998755554 5555555
Q ss_pred HHHHHHHhhc-CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhc
Q 018930 152 PLLDYLENLL-EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYG 230 (348)
Q Consensus 152 ~l~~~l~~l~-~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (348)
.+.++|++-. ..++++|+|+|+|...++.+|.+.| +.++||.+|.... .+.+.... .
T Consensus 117 avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~-----~rv~~~~~---~------------ 174 (258)
T KOG1552|consen 117 AVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG-----MRVAFPDT---K------------ 174 (258)
T ss_pred HHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhh-----hhhhccCc---c------------
Confidence 5666665544 4469999999999999999999988 9999999985321 11100000 0
Q ss_pred CCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHH
Q 018930 231 NGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKL 310 (348)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~ 310 (348)
..+. .+.....+++. .+++|+|++||++|.++|..+...+
T Consensus 175 -----------------~~~~------------------~d~f~~i~kI~-----~i~~PVLiiHgtdDevv~~sHg~~L 214 (258)
T KOG1552|consen 175 -----------------TTYC------------------FDAFPNIEKIS-----KITCPVLIIHGTDDEVVDFSHGKAL 214 (258)
T ss_pred -----------------eEEe------------------eccccccCcce-----eccCCEEEEecccCceecccccHHH
Confidence 0000 00001122222 2359999999999999999999999
Q ss_pred HHhCCCC-cEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 311 VRENPPE-GVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 311 ~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
.+..++. +-.+++|+||.-. +...++.+.+..|+.
T Consensus 215 ye~~k~~~epl~v~g~gH~~~-~~~~~yi~~l~~f~~ 250 (258)
T KOG1552|consen 215 YERCKEKVEPLWVKGAGHNDI-ELYPEYIEHLRRFIS 250 (258)
T ss_pred HHhccccCCCcEEecCCCccc-ccCHHHHHHHHHHHH
Confidence 9999765 7888999999974 445567778887764
No 66
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.80 E-value=1.9e-18 Score=145.73 Aligned_cols=119 Identities=11% Similarity=0.019 Sum_probs=91.1
Q ss_pred ccCCeeeeeeecCC---CCceEEEecCCCCCc----ccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHH
Q 018930 80 LSNGKQDTNILENI---QYKKFVLIHGEGFGA----WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKP 152 (348)
Q Consensus 80 ~~~g~~~~~~~~~~---~~~~vvllHG~~~~~----~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 152 (348)
...|..+.+++.+. ..++|||+||++... ..|..+++.|.++||+|+++|+||||.|+.+.. ..++..+++|
T Consensus 7 ~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~D 85 (266)
T TIGR03101 7 APHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKED 85 (266)
T ss_pred CCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHH
Confidence 34444444333222 246899999998653 356778899999999999999999999965333 3477777787
Q ss_pred HHHHH---HhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 153 LLDYL---ENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 153 l~~~l---~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
+..++ ++.+.. +++|+||||||.+++.+|.++|+++.++|+++|...
T Consensus 86 v~~ai~~L~~~~~~-~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 86 VAAAYRWLIEQGHP-PVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHhcCCC-CEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 76654 444554 999999999999999999999999999999998643
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.78 E-value=2e-17 Score=138.35 Aligned_cols=174 Identities=11% Similarity=0.002 Sum_probs=117.4
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC----------CCCC---ChHhhhHHHHHHHH-
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT----------NSVT---TLAEYSKPLLDYLE- 158 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~----------~~~~---~~~~~~~~l~~~l~- 158 (348)
...+.|||+||++++...|..+.+.|...++.+..++.+|...+.... .... .+.+..+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 456799999999999999999999998776666666666653221000 0001 12233333333333
Q ss_pred ---hhcCC-CcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCC
Q 018930 159 ---NLLED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKD 234 (348)
Q Consensus 159 ---~l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (348)
..+++ ++++|+|||+||.+++.++.++|+.+.++|.+++..... .
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~---------------~---------------- 142 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL---------------P---------------- 142 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc---------------c----------------
Confidence 33332 489999999999999999998998888777665421000 0
Q ss_pred CCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC
Q 018930 235 KPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN 314 (348)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~ 314 (348)
. . .. ...|+++++|++|.++|.+..+.+.+.+
T Consensus 143 ---------~-------------------------~------~~--------~~~pvli~hG~~D~vvp~~~~~~~~~~L 174 (232)
T PRK11460 143 ---------E-------------------------T------AP--------TATTIHLIHGGEDPVIDVAHAVAAQEAL 174 (232)
T ss_pred ---------c-------------------------c------cc--------CCCcEEEEecCCCCccCHHHHHHHHHHH
Confidence 0 0 00 0279999999999999999988777765
Q ss_pred C----CCcEEEecCCCCCCCccChHHHHHHHHHHh
Q 018930 315 P----PEGVYKIKGSDHCPFFSKPQSLHKILVEIA 345 (348)
Q Consensus 315 ~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 345 (348)
. ++++++++++||.+.-+.-+.+.+.|.+++
T Consensus 175 ~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 175 ISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred HHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 3 457888999999996555555666665555
No 68
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.74 E-value=2.7e-16 Score=131.63 Aligned_cols=241 Identities=17% Similarity=0.195 Sum_probs=126.2
Q ss_pred CCCceEEEecCCCCCccc-H-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh---cCCCcEE
Q 018930 93 IQYKKFVLIHGEGFGAWC-W-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVI 167 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~-~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~ 167 (348)
...|.||++||+.++... | +.+...+.++||.|+++++|||+.+.......++. -+.+|+..+++.+ ....++.
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~-G~t~D~~~~l~~l~~~~~~r~~~ 151 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHS-GETEDIRFFLDWLKARFPPRPLY 151 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecc-cchhHHHHHHHHHHHhCCCCceE
Confidence 457899999999877763 4 56888999999999999999999885422222221 1124444444443 4445999
Q ss_pred EEEECHHHHH-HHHHHHhCC-cccceEEEecccccCC------CCChh-hHHHHhhcchhhhhhhhhhhhhcCCCCCCCC
Q 018930 168 LVGHSSGGAC-VSYALEHFP-QKISKAIFLCATMVSD------GQRPF-DVFAEELGSAERFMQESQFLIYGNGKDKPPT 238 (348)
Q Consensus 168 lvGhS~Gg~~-a~~~a~~~p-~~v~~lvl~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (348)
.||.|+||.+ +..++++-. -.+.+.+.++.+.... ..... ..+...+... +.+.....+.......+..
T Consensus 152 avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~--L~~~~~~kl~~l~~~~p~~ 229 (345)
T COG0429 152 AVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRN--LKRNAARKLKELEPSLPGT 229 (345)
T ss_pred EEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHH--HHHHHHHHHHhcCcccCcH
Confidence 9999999954 544444321 1345555555432211 00000 1111111000 1111111111110000110
Q ss_pred chhhHH-----HhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHH-
Q 018930 239 GFMFEK-----QQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVR- 312 (348)
Q Consensus 239 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~- 312 (348)
.....+ ..+.+.+... ......+...++.......+.+| .+|+|+|+..+|++++++.......
T Consensus 230 ~~~~ik~~~ti~eFD~~~Tap--~~Gf~da~dYYr~aSs~~~L~~I--------r~PtLii~A~DDP~~~~~~iP~~~~~ 299 (345)
T COG0429 230 VLAAIKRCRTIREFDDLLTAP--LHGFADAEDYYRQASSLPLLPKI--------RKPTLIINAKDDPFMPPEVIPKLQEM 299 (345)
T ss_pred HHHHHHhhchHHhccceeeec--ccCCCcHHHHHHhcccccccccc--------ccceEEEecCCCCCCChhhCCcchhc
Confidence 000000 0000000000 00001111222222222333333 4999999999999999988766666
Q ss_pred hCCCCcEEEecCCCCCCCcc----ChH-HHHHHHHHHhc
Q 018930 313 ENPPEGVYKIKGSDHCPFFS----KPQ-SLHKILVEIAQ 346 (348)
Q Consensus 313 ~~~~~~~~~i~~~gH~~~~e----~p~-~~~~~i~~fl~ 346 (348)
..|++.+..-+.+||.-++. +|. -..+.|.+|++
T Consensus 300 ~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~ 338 (345)
T COG0429 300 LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338 (345)
T ss_pred CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHH
Confidence 67888999999999998887 443 33455556653
No 69
>PLN02442 S-formylglutathione hydrolase
Probab=99.74 E-value=5.3e-16 Score=133.80 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=75.9
Q ss_pred CCCceEEEecCCCCCcccHHH---HHHHHHhCCCeEEEeCCCCCCC-----CCC-------------CCC-----C--CC
Q 018930 93 IQYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLKGSGI-----DLS-------------DTN-----S--VT 144 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~-----S~~-------------~~~-----~--~~ 144 (348)
.+.|+|+|+||++++...|.. +...+...|+.|+.+|..++|. +.. ... . .+
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 356899999999998887744 3456677799999999887661 100 000 0 01
Q ss_pred ChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 145 TLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 145 ~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
-.+++.+.+...++.++.+ +++|+||||||.+|+.++.++|+++++++.+++...
T Consensus 125 ~~~~l~~~i~~~~~~~~~~-~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTS-RASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHHHhcCCC-ceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 1233333444444445665 899999999999999999999999999999988643
No 70
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.73 E-value=1.4e-16 Score=124.34 Aligned_cols=218 Identities=14% Similarity=0.132 Sum_probs=141.2
Q ss_pred eeeeecccCCeeee-eee-cCCCCceEEEecCCCCCcccHHHHHHHH-HhCCCeEEEeCCCCCCCCCCCCCCCCChHhhh
Q 018930 74 RTLSESLSNGKQDT-NIL-ENIQYKKFVLIHGEGFGAWCWYKTVASL-EEVGLIPTALDLKGSGIDLSDTNSVTTLAEYS 150 (348)
Q Consensus 74 ~~~~~~~~~g~~~~-~~~-~~~~~~~vvllHG~~~~~~~~~~~~~~L-~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 150 (348)
.+++.-..|...+. ++. ...+.|+++++||..++....-+.+.-+ ..-+.+|+.+++||+|.|...+.+ ..+.-.+
T Consensus 55 e~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE-~GL~lDs 133 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE-EGLKLDS 133 (300)
T ss_pred eEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc-cceeccH
Confidence 44444444554554 222 4557899999999999998887777644 444789999999999999764433 2444444
Q ss_pred HHHHHHHHh---hcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhh
Q 018930 151 KPLLDYLEN---LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFL 227 (348)
Q Consensus 151 ~~l~~~l~~---l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (348)
+.+.+.+-. +.. .+++|.|-|+||++|+.+|++..+++.++|+-+++...+.. ..... .
T Consensus 134 ~avldyl~t~~~~dk-tkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~-----~i~~v---~--------- 195 (300)
T KOG4391|consen 134 EAVLDYLMTRPDLDK-TKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHM-----AIPLV---F--------- 195 (300)
T ss_pred HHHHHHHhcCccCCc-ceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhh-----hhhee---c---------
Confidence 444444432 223 48999999999999999999999999999998875432110 00000 0
Q ss_pred hhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHH
Q 018930 228 IYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQ 307 (348)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~ 307 (348)
.+.-..+..+ ... +.+.. ..++. ..++|.|+|.|..|.++|+-..
T Consensus 196 -------------p~~~k~i~~l------------c~k--n~~~S---~~ki~-----~~~~P~LFiSGlkDelVPP~~M 240 (300)
T KOG4391|consen 196 -------------PFPMKYIPLL------------CYK--NKWLS---YRKIG-----QCRMPFLFISGLKDELVPPVMM 240 (300)
T ss_pred -------------cchhhHHHHH------------HHH--hhhcc---hhhhc-----cccCceEEeecCccccCCcHHH
Confidence 0000000000 000 00000 00111 1148999999999999999999
Q ss_pred HHHHHhCC--CCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 308 EKLVRENP--PEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 308 ~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
+.+.+..| +.++.+||++.|.-.+-. +-..++|.+||.
T Consensus 241 r~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dGYfq~i~dFla 280 (300)
T KOG4391|consen 241 RQLYELCPSRTKRLAEFPDGTHNDTWIC-DGYFQAIEDFLA 280 (300)
T ss_pred HHHHHhCchhhhhheeCCCCccCceEEe-ccHHHHHHHHHH
Confidence 99999987 458899999999866543 456677777764
No 71
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=3.2e-16 Score=126.13 Aligned_cols=226 Identities=14% Similarity=0.086 Sum_probs=142.6
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
.....++++|-.|+++..|..+...|... +.++++++||+|.--. ..-..+++++++.|..-+...-.+.++.++|||
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~-ep~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFG-EPLLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccC-CcccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 34568999999999999999999999884 9999999999997532 344568999999998888742233499999999
Q ss_pred HHHHHHHHHHHhCC---cccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhh
Q 018930 173 SGGACVSYALEHFP---QKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKG 249 (348)
Q Consensus 173 ~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (348)
|||++|.++|.+.. -.+..+++.+...+..... .. + .... -..++.....+-.. +... +....+..
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~-~~-i-~~~~-D~~~l~~l~~lgG~------p~e~-led~El~~ 151 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG-KQ-I-HHLD-DADFLADLVDLGGT------PPEL-LEDPELMA 151 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc-CC-c-cCCC-HHHHHHHHHHhCCC------ChHH-hcCHHHHH
Confidence 99999999997642 1256666665544311100 00 0 0000 00011111111000 0000 11111111
Q ss_pred hhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC-CCcEEEecCCCCC
Q 018930 250 LYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP-PEGVYKIKGSDHC 328 (348)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~-~~~~~~i~~~gH~ 328 (348)
++... ...+.. ......+... ..+ +||+.++.|++|..+..+....+.+... ..++.+++| ||+
T Consensus 152 l~LPi-lRAD~~----~~e~Y~~~~~-~pl--------~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHF 216 (244)
T COG3208 152 LFLPI-LRADFR----ALESYRYPPP-APL--------ACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHF 216 (244)
T ss_pred HHHHH-HHHHHH----HhcccccCCC-CCc--------CcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cce
Confidence 11000 001111 1111111111 122 4999999999999999999988888876 679999995 999
Q ss_pred CCccChHHHHHHHHHHhc
Q 018930 329 PFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 329 ~~~e~p~~~~~~i~~fl~ 346 (348)
...++.+++.+.|.+.+.
T Consensus 217 fl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 217 FLNQQREEVLARLEQHLA 234 (244)
T ss_pred ehhhhHHHHHHHHHHHhh
Confidence 999999999999998874
No 72
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.71 E-value=1.5e-15 Score=130.78 Aligned_cols=107 Identities=17% Similarity=0.154 Sum_probs=77.6
Q ss_pred CCCceEEEecCCCCCcccHHHH--HHHH-HhCCCeEEEeCC--CCCCCCCCC-------------------CCCCCChHh
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKT--VASL-EEVGLIPTALDL--KGSGIDLSD-------------------TNSVTTLAE 148 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~--~~~L-~~~G~~vi~~D~--~G~G~S~~~-------------------~~~~~~~~~ 148 (348)
.+.|+|||+||++++...|... +..+ .+.|+.|+++|. +|+|.+... ....+...+
T Consensus 40 ~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 3468999999999999888542 3344 456899999998 555533210 001122333
Q ss_pred -hhHHHHHHHHh---hcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 149 -YSKPLLDYLEN---LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 149 -~~~~l~~~l~~---l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
.++++..++++ ++.+ +++++||||||.+++.++.++|+.+++++++++...
T Consensus 120 ~~~~~l~~~~~~~~~~~~~-~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGE-RQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHHhhCCCCCC-ceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 35777777776 2344 899999999999999999999999999999888643
No 73
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.70 E-value=4.1e-16 Score=129.31 Aligned_cols=192 Identities=11% Similarity=0.092 Sum_probs=110.4
Q ss_pred cHHHHHHHHHhCCCeEEEeCCCCCCCCCC-------CCCCCCChHhhhHHHHHHHHhhcC-CCcEEEEEECHHHHHHHHH
Q 018930 110 CWYKTVASLEEVGLIPTALDLKGSGIDLS-------DTNSVTTLAEYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYA 181 (348)
Q Consensus 110 ~~~~~~~~L~~~G~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~ 181 (348)
.|......|+++||.|+.+|+||.+.... .......++|..+.+..++++-.+ .+++.++|||+||++++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 34566778989999999999999885321 111122333333333333333222 1499999999999999999
Q ss_pred HHhCCcccceEEEecccccCCCCChhhH-HHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHH
Q 018930 182 LEHFPQKISKAIFLCATMVSDGQRPFDV-FAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDV 260 (348)
Q Consensus 182 a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (348)
+.++|++++++|..++............ +.. ......-.........
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~ 129 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTK--------------------------------AEYLEYGDPWDNPEFY 129 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTCCHHH--------------------------------GHHHHHSSTTTSHHHH
T ss_pred hcccceeeeeeeccceecchhccccccccccc--------------------------------ccccccCccchhhhhh
Confidence 9999999999999988654332111000 000 0000000000001111
Q ss_pred HHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC----CCCcEEEecCCCCCCC-ccChH
Q 018930 261 ALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN----PPEGVYKIKGSDHCPF-FSKPQ 335 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~ 335 (348)
. ....... ...+. .++|+|+++|++|..||++....+.+.+ .+.+++++|++||.+. .+...
T Consensus 130 ~-~~s~~~~------~~~~~------~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~ 196 (213)
T PF00326_consen 130 R-ELSPISP------ADNVQ------IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRR 196 (213)
T ss_dssp H-HHHHGGG------GGGCG------GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHH
T ss_pred h-hhccccc------ccccc------CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHH
Confidence 1 1111110 01100 1389999999999999999877776655 3579999999999654 34455
Q ss_pred HHHHHHHHHhc
Q 018930 336 SLHKILVEIAQ 346 (348)
Q Consensus 336 ~~~~~i~~fl~ 346 (348)
+..+.+.+|++
T Consensus 197 ~~~~~~~~f~~ 207 (213)
T PF00326_consen 197 DWYERILDFFD 207 (213)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67777777775
No 74
>PLN00021 chlorophyllase
Probab=99.70 E-value=9.2e-16 Score=133.07 Aligned_cols=101 Identities=19% Similarity=0.175 Sum_probs=76.1
Q ss_pred CCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHH----h-------h
Q 018930 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLE----N-------L 160 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~----~-------l 160 (348)
.+..|+|||+||++.+...|..+++.|+++||.|+++|++|++.+. ....+++ +.++.+++. . .
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~----~~~~i~d-~~~~~~~l~~~l~~~l~~~~~~ 123 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPD----GTDEIKD-AAAVINWLSSGLAAVLPEGVRP 123 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCC----chhhHHH-HHHHHHHHHhhhhhhccccccc
Confidence 3557899999999999999999999999999999999999975331 1122322 222233332 2 1
Q ss_pred cCCCcEEEEEECHHHHHHHHHHHhCCc-----ccceEEEeccc
Q 018930 161 LEDEKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCAT 198 (348)
Q Consensus 161 ~~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~ 198 (348)
+. ++++|+|||+||.+|+.+|..+++ +++++|+++|.
T Consensus 124 d~-~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 124 DL-SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred Ch-hheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 23 389999999999999999998874 57888988875
No 75
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.68 E-value=2e-15 Score=143.57 Aligned_cols=229 Identities=15% Similarity=0.086 Sum_probs=141.8
Q ss_pred ccceeeeecccCCeeeeeee-cC--CC----CceEEEecCCCCCccc--HHHHHHHHHhCCCeEEEeCCCCCCCCC----
Q 018930 71 SRRRTLSESLSNGKQDTNIL-EN--IQ----YKKFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDLKGSGIDL---- 137 (348)
Q Consensus 71 ~~~~~~~~~~~~g~~~~~~~-~~--~~----~~~vvllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~---- 137 (348)
..++.++.+..+|..++.+. .+ .+ -|+||++||.+..... |...++.|+.+||.|+.++.||.+.-.
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH
Confidence 34556677777888877433 21 11 2799999999866654 677888999999999999999765421
Q ss_pred ---CCCCCCCChHhhhHHHHHHHHhhcCC--CcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHH
Q 018930 138 ---SDTNSVTTLAEYSKPLLDYLENLLED--EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAE 212 (348)
Q Consensus 138 ---~~~~~~~~~~~~~~~l~~~l~~l~~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 212 (348)
........++|+.+.+. ++++.+.- +++.+.|||+||++++.++.+.| .+++.+...+..... ..
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~--------~~ 512 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWL--------LY 512 (620)
T ss_pred HhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhh--------hh
Confidence 11223346666666666 66665532 48999999999999999999877 677776666543211 00
Q ss_pred hhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceE
Q 018930 213 ELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRF 292 (348)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl 292 (348)
.......+........ ..... ........ .......++ ++|+|
T Consensus 513 ~~~~~~~~~~~~~~~~------------------------~~~~~--~~~~~~~~---sp~~~~~~i--------~~P~L 555 (620)
T COG1506 513 FGESTEGLRFDPEENG------------------------GGPPE--DREKYEDR---SPIFYADNI--------KTPLL 555 (620)
T ss_pred ccccchhhcCCHHHhC------------------------CCccc--ChHHHHhc---Chhhhhccc--------CCCEE
Confidence 0000000000000000 00000 00000000 111112222 48999
Q ss_pred EEEeCCCCCCCHHHHHHHHHhC----CCCcEEEecCCCCCCCc-cChHHHHHHHHHHhc
Q 018930 293 FIQTLDDRALSPDVQEKLVREN----PPEGVYKIKGSDHCPFF-SKPQSLHKILVEIAQ 346 (348)
Q Consensus 293 ~i~G~~D~~vp~~~~~~~~~~~----~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 346 (348)
+|||++|..||.+.+..+.+.+ .+.+++++|+.+|.+.- ++-..+.+.+.+|++
T Consensus 556 liHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~ 614 (620)
T COG1506 556 LIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFK 614 (620)
T ss_pred EEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHH
Confidence 9999999999999888777665 45689999999999766 444556666666664
No 76
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.68 E-value=3.9e-14 Score=116.11 Aligned_cols=248 Identities=13% Similarity=0.105 Sum_probs=159.3
Q ss_pred eeecCCC--CceEEEecCCCCCccc-HHHHH-----HHHHhCCCeEEEeCCCCCCCCCC--CCC-CCCChHhhhHHHHHH
Q 018930 88 NILENIQ--YKKFVLIHGEGFGAWC-WYKTV-----ASLEEVGLIPTALDLKGSGIDLS--DTN-SVTTLAEYSKPLLDY 156 (348)
Q Consensus 88 ~~~~~~~--~~~vvllHG~~~~~~~-~~~~~-----~~L~~~G~~vi~~D~~G~G~S~~--~~~-~~~~~~~~~~~l~~~ 156 (348)
+.+++.+ +|++|-.|..+.+... |..++ ..+.++ |.|+-+|-|||-.-.. +.+ ...++++++++|..+
T Consensus 37 ~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~V 115 (326)
T KOG2931|consen 37 TVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEV 115 (326)
T ss_pred EEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHH
Confidence 4445444 8899999999998875 66553 567776 9999999999965422 222 456999999999999
Q ss_pred HHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchh----hhhhhh-hhhhhcC
Q 018930 157 LENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAE----RFMQES-QFLIYGN 231 (348)
Q Consensus 157 l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~ 231 (348)
+++++.+ .++-+|.--|++|..++|..||++|-+|||+++.....+ +.++....+.... .+.... ..++...
T Consensus 116 L~~f~lk-~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g--wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~ 192 (326)
T KOG2931|consen 116 LDHFGLK-SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG--WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHH 192 (326)
T ss_pred HHhcCcc-eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch--HHHHHHHHHHHHHHHhhchhhhHHHHHHHHH
Confidence 9999998 999999999999999999999999999999999766554 5555554433211 011111 1111110
Q ss_pred -CCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhc-CCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHH
Q 018930 232 -GKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASM-RPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEK 309 (348)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~ 309 (348)
+........+. ...++..+...............+ ...++..-...... ..+||+|++.|++.+.+.. ...
T Consensus 193 Fg~e~~~~~~di-Vq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~----tlkc~vllvvGd~Sp~~~~--vv~ 265 (326)
T KOG2931|consen 193 FGKEELGNNSDI-VQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGT----TLKCPVLLVVGDNSPHVSA--VVE 265 (326)
T ss_pred hccccccccHHH-HHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCc----cccccEEEEecCCCchhhh--hhh
Confidence 01111111111 123333333333333333333322 22222211111110 2259999999999886643 233
Q ss_pred HHHhC--CCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 310 LVREN--PPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 310 ~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
+..++ .+..+..+.++|-.+..++|..+++.+.-|++
T Consensus 266 ~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 266 CNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred hhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 44444 25688889999999999999999999999986
No 77
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.3e-14 Score=123.74 Aligned_cols=252 Identities=13% Similarity=0.161 Sum_probs=150.7
Q ss_pred CCceEEEecCCCCCcccHHH-------HHHHH-------HhCCCeEEEeCCCCCC-CCCCC----CC--------CCCCh
Q 018930 94 QYKKFVLIHGEGFGAWCWYK-------TVASL-------EEVGLIPTALDLKGSG-IDLSD----TN--------SVTTL 146 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~-------~~~~L-------~~~G~~vi~~D~~G~G-~S~~~----~~--------~~~~~ 146 (348)
...+||++||+.++...... +.+.| .-.-|.||++|-.|.+ .|+.+ +. ...++
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 35689999999996664321 33333 2234899999999876 34321 11 34688
Q ss_pred HhhhHHHHHHHHhhcCCCcEE-EEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCCh--hhHHHHhhcchh-----
Q 018930 147 AEYSKPLLDYLENLLEDEKVI-LVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRP--FDVFAEELGSAE----- 218 (348)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~----- 218 (348)
.|++..-..++++||++ ++. +||-||||+.|+.++..||++|.++|.+++......... .....+....-.
T Consensus 130 ~D~V~aq~~ll~~LGI~-~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G 208 (368)
T COG2021 130 RDMVRAQRLLLDALGIK-KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGG 208 (368)
T ss_pred HHHHHHHHHHHHhcCcc-eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCC
Confidence 89999889999999998 655 999999999999999999999999999988654332111 000000000000
Q ss_pred ------------hhhhhhhhhhh----------cCCCCCCCCc---hhhHHHhh----hhhhccCCChHHHHHHHHhcCC
Q 018930 219 ------------RFMQESQFLIY----------GNGKDKPPTG---FMFEKQQM----KGLYFNQSPSKDVALAMASMRP 269 (348)
Q Consensus 219 ------------~~~~~~~~~~~----------~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 269 (348)
...+....+.+ .......+.. ..+..+.+ -+.+........+......+..
T Consensus 209 ~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~ 288 (368)
T COG2021 209 DYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDY 288 (368)
T ss_pred CccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHh
Confidence 01111111110 0000000000 00111111 1112222223333333333333
Q ss_pred CCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCc-EEEec-CCCCCCCccChHHHHHHHHHHhcC
Q 018930 270 TPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEG-VYKIK-GSDHCPFFSKPQSLHKILVEIAQI 347 (348)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~-~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 347 (348)
++.......+.. ....+++|++++.-+.|...|++..+.+.+.++.+. +++|+ ..||.-|+...+.+...|..||+.
T Consensus 289 ~D~s~~~~~l~~-al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 289 HDVSRGRGDLTA-ALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred cCCCCCcCcHHH-HHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 333332111110 011234899999999999999999999999998877 76666 679999999999999999999974
No 78
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.67 E-value=7.3e-15 Score=128.62 Aligned_cols=233 Identities=12% Similarity=0.078 Sum_probs=126.4
Q ss_pred cceeeeecccCCeeee-e-eec--CCCCceEEEecCCCCCcccHHHH-HHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCh
Q 018930 72 RRRTLSESLSNGKQDT-N-ILE--NIQYKKFVLIHGEGFGAWCWYKT-VASLEEVGLIPTALDLKGSGIDLSDTNSVTTL 146 (348)
Q Consensus 72 ~~~~~~~~~~~g~~~~-~-~~~--~~~~~~vvllHG~~~~~~~~~~~-~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~ 146 (348)
..+.+.+|..+ ..+. | ... ++..|+||++.|+.+....+..+ .+.|..+|+.++++|.||.|.|...+.. .+.
T Consensus 164 ~i~~v~iP~eg-~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~ 241 (411)
T PF06500_consen 164 PIEEVEIPFEG-KTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDS 241 (411)
T ss_dssp EEEEEEEEETT-CEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-C
T ss_pred CcEEEEEeeCC-cEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCH
Confidence 34677778766 4444 2 222 23357888888988888776555 4678999999999999999998643322 234
Q ss_pred HhhhHHHHHHHHhhc---CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhh
Q 018930 147 AEYSKPLLDYLENLL---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQE 223 (348)
Q Consensus 147 ~~~~~~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (348)
+.+...+.+++.... .. +|.++|.|+||++|+++|..+++|++++|.++++... .+............+.
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~-RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~----~ft~~~~~~~~P~my~-- 314 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHT-RVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHH----FFTDPEWQQRVPDMYL-- 314 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEE-EEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SC----GGH-HHHHTTS-HHHH--
T ss_pred HHHHHHHHHHHhcCCccChh-heEEEEeccchHHHHHHHHhcccceeeEeeeCchHhh----hhccHHHHhcCCHHHH--
Confidence 556666667776653 33 8999999999999999998889999999999986432 1111111000000000
Q ss_pred hhhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCC--CcccccccCCcCccCCcceEEEEeCCCCC
Q 018930 224 SQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPL--GPIMEKLSLSPEKYGTGRRFFIQTLDDRA 301 (348)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~ 301 (348)
..+...+-.... . .......+....+ ..++. .+...+|+|.++|++|.+
T Consensus 315 ---------------------d~LA~rlG~~~~-~-~~~l~~el~~~SLk~qGlL~------~rr~~~plL~i~~~~D~v 365 (411)
T PF06500_consen 315 ---------------------DVLASRLGMAAV-S-DESLRGELNKFSLKTQGLLS------GRRCPTPLLAINGEDDPV 365 (411)
T ss_dssp ---------------------HHHHHHCT-SCE---HHHHHHHGGGGSTTTTTTTT------SS-BSS-EEEEEETT-SS
T ss_pred ---------------------HHHHHHhCCccC-C-HHHHHHHHHhcCcchhcccc------CCCCCcceEEeecCCCCC
Confidence 001110000000 0 0111111111111 11220 112248999999999999
Q ss_pred CCHHHHHHHHHhCCCCcEEEecCCC-CCCCccChHHHHHHHHHHhc
Q 018930 302 LSPDVQEKLVRENPPEGVYKIKGSD-HCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 302 vp~~~~~~~~~~~~~~~~~~i~~~g-H~~~~e~p~~~~~~i~~fl~ 346 (348)
+|.+..+-++....+.+...++... |.-+ +.-...+.+||+
T Consensus 366 ~P~eD~~lia~~s~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~ 407 (411)
T PF06500_consen 366 SPIEDSRLIAESSTDGKALRIPSKPLHMGY----PQALDEIYKWLE 407 (411)
T ss_dssp S-HHHHHHHHHTBTT-EEEEE-SSSHHHHH----HHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCceeecCCCccccch----HHHHHHHHHHHH
Confidence 9999998888887778888888543 3322 234455555553
No 79
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.66 E-value=9.2e-15 Score=121.62 Aligned_cols=242 Identities=12% Similarity=0.116 Sum_probs=135.3
Q ss_pred eeecCCC--CceEEEecCCCCCccc-HHHHH-----HHHHhCCCeEEEeCCCCCCCCCC--CC-CCCCChHhhhHHHHHH
Q 018930 88 NILENIQ--YKKFVLIHGEGFGAWC-WYKTV-----ASLEEVGLIPTALDLKGSGIDLS--DT-NSVTTLAEYSKPLLDY 156 (348)
Q Consensus 88 ~~~~~~~--~~~vvllHG~~~~~~~-~~~~~-----~~L~~~G~~vi~~D~~G~G~S~~--~~-~~~~~~~~~~~~l~~~ 156 (348)
+..++.+ +|++|-.|-.|.+... |..++ +.+.++ |.++-+|-||+..-.. +. ....+++++++++.++
T Consensus 14 ~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~V 92 (283)
T PF03096_consen 14 TVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEV 92 (283)
T ss_dssp EEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHH
T ss_pred EEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHH
Confidence 4445554 8999999999998875 76654 456664 9999999999976432 22 2456999999999999
Q ss_pred HHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchh--------hhhhhhhhhh
Q 018930 157 LENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAE--------RFMQESQFLI 228 (348)
Q Consensus 157 l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 228 (348)
+++++++ .++-+|.-.|++|..++|..||++|.++||+++.....+ +.+++........ ........-.
T Consensus 93 l~~f~lk-~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g--w~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~ 169 (283)
T PF03096_consen 93 LDHFGLK-SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG--WMEWFYQKLSSWLLYSYGMTSSVKDYLLWHY 169 (283)
T ss_dssp HHHHT----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHHHHH-------CTTS-HHHHHHHHH
T ss_pred HHhCCcc-EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc--HHHHHHHHHhcccccccccccchHHhhhhcc
Confidence 9999998 999999999999999999999999999999999766544 5555554433110 0000000000
Q ss_pred hcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHH-HhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHH
Q 018930 229 YGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAM-ASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQ 307 (348)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~ 307 (348)
++...... ..+ ....++..+.....+....... ......++....... .||+|++.|+..+... ..
T Consensus 170 Fg~~~~~~--n~D-lv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~--------~c~vLlvvG~~Sp~~~--~v 236 (283)
T PF03096_consen 170 FGKEEEEN--NSD-LVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSL--------GCPVLLVVGDNSPHVD--DV 236 (283)
T ss_dssp S-HHHHHC--T-H-HHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTC--------CS-EEEEEETTSTTHH--HH
T ss_pred cccccccc--cHH-HHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCC--------CCCeEEEEecCCcchh--hH
Confidence 00000000 000 1122222232322322222222 222233333222222 3999999999887653 34
Q ss_pred HHHHHhC-C-CCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 308 EKLVREN-P-PEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 308 ~~~~~~~-~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
..+..++ | +.++..++++|=.+..|+|+.+++.++-||+
T Consensus 237 v~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 237 VEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred HHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 4566666 3 4578889999999999999999999999986
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.66 E-value=4.6e-15 Score=122.76 Aligned_cols=108 Identities=15% Similarity=0.110 Sum_probs=75.0
Q ss_pred CCCceEEEecCCCCCcccHH---HHHHHHHhCCCeEEEeCCCCCCCCCCCC-----CCCCChHhhhHHHHHHHH----hh
Q 018930 93 IQYKKFVLIHGEGFGAWCWY---KTVASLEEVGLIPTALDLKGSGIDLSDT-----NSVTTLAEYSKPLLDYLE----NL 160 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~---~~~~~L~~~G~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~~~l~~~l~----~l 160 (348)
++.|+||++||.+++...|. .+...+.+.||.|+++|.+|++.+.... ...........++.++++ ..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 45689999999998887765 3555566679999999999987543100 000000112223333333 33
Q ss_pred cCC-CcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 161 LED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 161 ~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
+++ ++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 332 4899999999999999999999999999998887654
No 81
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.65 E-value=3.4e-14 Score=123.50 Aligned_cols=224 Identities=15% Similarity=0.193 Sum_probs=121.4
Q ss_pred CCceEEEecCCCCCccc--HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh---cCCCcEEE
Q 018930 94 QYKKFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVIL 168 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~l 168 (348)
..|+||++||+.+++.. -..++..+.++||+|++++.||+|.|.-.....+ ...+.+|+.++++++ -...++..
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f-~ag~t~Dl~~~v~~i~~~~P~a~l~a 202 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLF-TAGWTEDLREVVNHIKKRYPQAPLFA 202 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCcee-ecCCHHHHHHHHHHHHHhCCCCceEE
Confidence 45899999999877763 3567788888999999999999999864333322 223344444444443 23348999
Q ss_pred EEECHHHHHHHHHHHhCCcc--cceEEEecccccCC-CCC-----hhhHH-HHhhc-chhhhhhhhhhhhhcCCCC----
Q 018930 169 VGHSSGGACVSYALEHFPQK--ISKAIFLCATMVSD-GQR-----PFDVF-AEELG-SAERFMQESQFLIYGNGKD---- 234 (348)
Q Consensus 169 vGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~-~~~-----~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~---- 234 (348)
+|.||||.+...|..+..++ +.+.+.++.++..- ... ....+ ...+. ............+.....+
T Consensus 203 vG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~ 282 (409)
T KOG1838|consen 203 VGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVI 282 (409)
T ss_pred EEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhh
Confidence 99999999999998764332 44444444433211 000 00000 00000 0000000000101000000
Q ss_pred -CCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHH-HHHHH
Q 018930 235 -KPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQ-EKLVR 312 (348)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~-~~~~~ 312 (348)
...+..++++......+-... ....++........+++ ++|+|+|+..+|+++|++.. .....
T Consensus 283 ~~~~SvreFD~~~t~~~~gf~~-------~deYY~~aSs~~~v~~I--------~VP~L~ina~DDPv~p~~~ip~~~~~ 347 (409)
T KOG1838|consen 283 LKSRSVREFDEALTRPMFGFKS-------VDEYYKKASSSNYVDKI--------KVPLLCINAADDPVVPEEAIPIDDIK 347 (409)
T ss_pred hhcCcHHHHHhhhhhhhcCCCc-------HHHHHhhcchhhhcccc--------cccEEEEecCCCCCCCcccCCHHHHh
Confidence 001111111111111111110 11112222222233333 49999999999999998653 56667
Q ss_pred hCCCCcEEEecCCCCCCCccC
Q 018930 313 ENPPEGVYKIKGSDHCPFFSK 333 (348)
Q Consensus 313 ~~~~~~~~~i~~~gH~~~~e~ 333 (348)
..|+.-+++-.-+||.-++|.
T Consensus 348 ~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 348 SNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cCCcEEEEEeCCCceeeeecc
Confidence 778888888888899999986
No 82
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.65 E-value=2e-15 Score=134.84 Aligned_cols=107 Identities=21% Similarity=0.179 Sum_probs=83.3
Q ss_pred CCCCceEEEecCCCCCc--ccHHH-HHHHHHh--CCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh------
Q 018930 92 NIQYKKFVLIHGEGFGA--WCWYK-TVASLEE--VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL------ 160 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~--~~~~~-~~~~L~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------ 160 (348)
+..+|++|+|||++.+. ..|.. +++.|.. ..++||++|++|+|.|..+... ......++++.++++.+
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCC
Confidence 45678999999998754 35765 5555542 2599999999999987543222 34466777777777765
Q ss_pred cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 161 LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 161 ~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
+++ +++||||||||.+|..++..+|++|.++++++|+.+
T Consensus 117 ~l~-~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 117 PWD-NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCC-cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 244 999999999999999999999999999999999754
No 83
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.64 E-value=5.7e-15 Score=122.51 Aligned_cols=177 Identities=15% Similarity=0.116 Sum_probs=103.6
Q ss_pred CCCCceEEEecCCCCCcccHHHHHH-HHHhCCCeEEEeCCCC------CCC---C-----CCCCCC---CCChHhhhHHH
Q 018930 92 NIQYKKFVLIHGEGFGAWCWYKTVA-SLEEVGLIPTALDLKG------SGI---D-----LSDTNS---VTTLAEYSKPL 153 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~-~L~~~G~~vi~~D~~G------~G~---S-----~~~~~~---~~~~~~~~~~l 153 (348)
+...++|||+||+|.+...|..+.. .+......++.++-|- .|. + ...... ...+.+.++.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 4567899999999999976666555 2222346677665431 122 1 001111 12344445555
Q ss_pred HHHHHhh---cC-CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhh
Q 018930 154 LDYLENL---LE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIY 229 (348)
Q Consensus 154 ~~~l~~l---~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (348)
.++++.. ++ .++++|.|+|.||++++.++.++|+.+.++|.+++..+......
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~----------------------- 147 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE----------------------- 147 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH-----------------------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc-----------------------
Confidence 6666543 22 24899999999999999999999999999999998643211000
Q ss_pred cCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHH
Q 018930 230 GNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEK 309 (348)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~ 309 (348)
....... ++|++++||.+|.++|.+..+.
T Consensus 148 --------------------------------------------~~~~~~~-------~~pi~~~hG~~D~vvp~~~~~~ 176 (216)
T PF02230_consen 148 --------------------------------------------DRPEALA-------KTPILIIHGDEDPVVPFEWAEK 176 (216)
T ss_dssp --------------------------------------------CCHCCCC-------TS-EEEEEETT-SSSTHHHHHH
T ss_pred --------------------------------------------ccccccC-------CCcEEEEecCCCCcccHHHHHH
Confidence 0000000 2799999999999999987766
Q ss_pred HHHhC----CCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 310 LVREN----PPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 310 ~~~~~----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
..+.+ .+.++..++|.||.+. .+..+.+.+||+
T Consensus 177 ~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~ 213 (216)
T PF02230_consen 177 TAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLE 213 (216)
T ss_dssp HHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHh
Confidence 66554 3568899999999985 334455666664
No 84
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.62 E-value=2.9e-14 Score=109.83 Aligned_cols=174 Identities=17% Similarity=0.142 Sum_probs=125.6
Q ss_pred CCCceEEEecCCCC-----CcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcE-
Q 018930 93 IQYKKFVLIHGEGF-----GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKV- 166 (348)
Q Consensus 93 ~~~~~vvllHG~~~-----~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v- 166 (348)
...|+.|++|-.+. +...-..+...|.++||.++.||+||.|.|...-+....-.+.+....++++....+.+.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 44677788875443 223456677889999999999999999999876555555556666777788777655344
Q ss_pred EEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHh
Q 018930 167 ILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQ 246 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (348)
.|.|+|+|++|++.+|.+.|+ ....+.+.+..... +
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~-----d-------------------------------------- 141 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY-----D-------------------------------------- 141 (210)
T ss_pred hhcccchHHHHHHHHHHhccc-ccceeeccCCCCch-----h--------------------------------------
Confidence 689999999999999998876 44444444422100 0
Q ss_pred hhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCC
Q 018930 247 MKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSD 326 (348)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~g 326 (348)
.. ++... .+|.++|+|+.|.+++.....++++. ...+++++++++
T Consensus 142 -----------------fs---------~l~P~--------P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~ 186 (210)
T COG2945 142 -----------------FS---------FLAPC--------PSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGAD 186 (210)
T ss_pred -----------------hh---------hccCC--------CCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCC
Confidence 00 00000 27899999999999999888888877 456889999999
Q ss_pred CCCCccChHHHHHHHHHHhc
Q 018930 327 HCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 327 H~~~~e~p~~~~~~i~~fl~ 346 (348)
|+++ .+-..+.+.|.+|+.
T Consensus 187 HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 187 HFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred ceec-ccHHHHHHHHHHHhh
Confidence 9975 466788999999884
No 85
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.61 E-value=9.9e-15 Score=115.17 Aligned_cols=154 Identities=19% Similarity=0.172 Sum_probs=102.7
Q ss_pred EEEecCCCCCcc-cHHHHHH-HHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHH
Q 018930 98 FVLIHGEGFGAW-CWYKTVA-SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (348)
Q Consensus 98 vvllHG~~~~~~-~~~~~~~-~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (348)
|+++||++++.. .|.++.+ .|... ++|-.+|+ ...+.+++.+.+.+.+.... ++++|||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAID--EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHHH
Confidence 689999998865 7887665 55554 77777665 22378888888888887653 589999999999
Q ss_pred HHHHHHH-HhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccC
Q 018930 176 ACVSYAL-EHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQ 254 (348)
Q Consensus 176 ~~a~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (348)
..++.++ .....+|.+++|++|+..... ........
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~~~~-------~~~~~~~~------------------------------------ 103 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDPDDP-------EPFPPELD------------------------------------ 103 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SCGCH-------HCCTCGGC------------------------------------
T ss_pred HHHHHHHhhcccccccEEEEEcCCCcccc-------cchhhhcc------------------------------------
Confidence 9999999 777889999999999743200 00000000
Q ss_pred CChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCcc
Q 018930 255 SPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFS 332 (348)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 332 (348)
..... -...+ .+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+.--+
T Consensus 104 --------------~f~~~-p~~~l--------~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 104 --------------GFTPL-PRDPL--------PFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp --------------CCTTS-HCCHH--------HCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred --------------ccccC-ccccc--------CCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccccc
Confidence 00000 00111 267899999999999999999999998 78999999999997654
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.61 E-value=6.1e-14 Score=116.67 Aligned_cols=177 Identities=16% Similarity=0.061 Sum_probs=110.6
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCC-CCCCC-CCCC--------ChHhhhHHHHHHHHhhcC-
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGI-DLSDT-NSVT--------TLAEYSKPLLDYLENLLE- 162 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~-S~~~~-~~~~--------~~~~~~~~l~~~l~~l~~- 162 (348)
+.|.||++|++.+-......+++.|+++||.|+++|+-+-.. ..... .... ..+...+++...++.+..
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 578999999999888777889999999999999999764443 11111 1000 123455666555555532
Q ss_pred ----CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCC
Q 018930 163 ----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPT 238 (348)
Q Consensus 163 ----~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (348)
.+++.++|+||||.+++.+|... +.+++.|..-+..... ..
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~-----~~----------------------------- 137 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPP-----PP----------------------------- 137 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGG-----GH-----------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCC-----cc-----------------------------
Confidence 24899999999999999999876 5788888776610000 00
Q ss_pred chhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC----
Q 018930 239 GFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN---- 314 (348)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~---- 314 (348)
.. ....+ ++|+++++|++|+.+|.+..+.+.+.+
T Consensus 138 -----~~-----------------------------~~~~~--------~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 175 (218)
T PF01738_consen 138 -----LE-----------------------------DAPKI--------KAPVLILFGENDPFFPPEEVEALEEALKAAG 175 (218)
T ss_dssp -----HH-----------------------------HGGG----------S-EEEEEETT-TTS-HHHHHHHHHHHHCTT
T ss_pred -----hh-----------------------------hhccc--------CCCEeecCccCCCCCChHHHHHHHHHHHhcC
Confidence 00 00111 389999999999999998766655544
Q ss_pred CCCcEEEecCCCCCCCccChH--------HHHHHHHHHhcC
Q 018930 315 PPEGVYKIKGSDHCPFFSKPQ--------SLHKILVEIAQI 347 (348)
Q Consensus 315 ~~~~~~~i~~~gH~~~~e~p~--------~~~~~i~~fl~~ 347 (348)
...++++++|++|-+...... +-.+.+.+|++.
T Consensus 176 ~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 176 VDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp TTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred CcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 567999999999988765332 344556667654
No 87
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.60 E-value=4.7e-15 Score=126.91 Aligned_cols=108 Identities=19% Similarity=0.153 Sum_probs=81.1
Q ss_pred cCCCCceEEEecCCCCCc-ccHHHH-HHHH-HhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh------c
Q 018930 91 ENIQYKKFVLIHGEGFGA-WCWYKT-VASL-EEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL------L 161 (348)
Q Consensus 91 ~~~~~~~vvllHG~~~~~-~~~~~~-~~~L-~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------~ 161 (348)
-+.++|++|+|||++++. ..|... ...+ ...+++|+++|++|++.+.. .....++...++++..+++.+ +
T Consensus 32 f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y-~~a~~~~~~v~~~la~~l~~L~~~~g~~ 110 (275)
T cd00707 32 FNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNY-PQAVNNTRVVGAELAKFLDFLVDNTGLS 110 (275)
T ss_pred CCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccCh-HHHHHhHHHHHHHHHHHHHHHHHhcCCC
Confidence 356688999999999988 677654 4444 44579999999999843321 122234555566666666654 2
Q ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 162 ~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
. ++++||||||||.+|..++.++|++|.++++++|+.+
T Consensus 111 ~-~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 111 L-ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred h-HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 3 4899999999999999999999999999999998754
No 88
>PRK10162 acetyl esterase; Provisional
Probab=99.58 E-value=4.4e-13 Score=117.67 Aligned_cols=122 Identities=11% Similarity=0.048 Sum_probs=80.1
Q ss_pred eeeecccCCe-eeeeeec-CCCCceEEEecCCC---CCcccHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHh
Q 018930 75 TLSESLSNGK-QDTNILE-NIQYKKFVLIHGEG---FGAWCWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAE 148 (348)
Q Consensus 75 ~~~~~~~~g~-~~~~~~~-~~~~~~vvllHG~~---~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~ 148 (348)
.+..+..+|. .+.++.. ..+.|+||++||.+ ++...|..++..|+. .|+.|+.+|+|...+... ...+++
T Consensus 59 ~~~i~~~~g~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~----p~~~~D 134 (318)
T PRK10162 59 AYMVPTPYGQVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARF----PQAIEE 134 (318)
T ss_pred EEEEecCCCceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCC----CCcHHH
Confidence 3444444442 3333332 33468999999977 455678888888887 489999999997554321 112333
Q ss_pred h---hHHHHHHHHhhcCC-CcEEEEEECHHHHHHHHHHHhC------CcccceEEEeccccc
Q 018930 149 Y---SKPLLDYLENLLED-EKVILVGHSSGGACVSYALEHF------PQKISKAIFLCATMV 200 (348)
Q Consensus 149 ~---~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~ 200 (348)
. .+.+.+..+.++++ ++++|+|+|+||.+|+.++... +.++.++|++.|...
T Consensus 135 ~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 135 IVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 3 23333333445542 4899999999999999888643 357899999987643
No 89
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.57 E-value=1.7e-13 Score=115.04 Aligned_cols=220 Identities=14% Similarity=0.143 Sum_probs=134.7
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHH
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (348)
++|+|+|+.+++...|.++++.|...++.|+.++.+|.+.. .....+++++++...+.|.....+.+++|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~---~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDD---EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTT---SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCC---CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999999999999999984489999999999832 334469999999999999887765699999999999
Q ss_pred HHHHHHHHhC---CcccceEEEecccccCCCCChhhHHHHhhc-chhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhh
Q 018930 176 ACVSYALEHF---PQKISKAIFLCATMVSDGQRPFDVFAEELG-SAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLY 251 (348)
Q Consensus 176 ~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (348)
.+|.++|.+. ...|..++++++..+...... ........ ....+....... .........+...+
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 146 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERP-RSREPSDEQFIEELRRIGGTP----------DASLEDEELLARLL 146 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCH-HHHHCHHHHHHHHHHHHCHHH----------HHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccch-hhhhhhHHHHHHHHHHhcCCc----------hhhhcCHHHHHHHH
Confidence 9999999753 345899999997654321111 10000000 000000000000 00000000011000
Q ss_pred ccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHH---HHHHHHHhCCC-CcEEEecCCCC
Q 018930 252 FNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPD---VQEKLVRENPP-EGVYKIKGSDH 327 (348)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~---~~~~~~~~~~~-~~~~~i~~~gH 327 (348)
.................... ..+|.++.....|...... ....+.+...+ .+++.++ ++|
T Consensus 147 ------~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H 210 (229)
T PF00975_consen 147 ------RALRDDFQALENYSIRPIDK---------QKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDH 210 (229)
T ss_dssp ------HHHHHHHHHHHTCS-TTSSS---------ESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SET
T ss_pred ------HHHHHHHHHHhhccCCcccc---------CCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCC
Confidence 00000111111111000000 0267899999999988776 34446666654 4778888 599
Q ss_pred CCCcc-ChHHHHHHHHHHh
Q 018930 328 CPFFS-KPQSLHKILVEIA 345 (348)
Q Consensus 328 ~~~~e-~p~~~~~~i~~fl 345 (348)
+.++. +..++++.|.++|
T Consensus 211 ~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 211 FSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TGHHSTTHHHHHHHHHHHH
T ss_pred cEecchHHHHHHHHHhccC
Confidence 98887 7788999998875
No 90
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.54 E-value=1.1e-13 Score=116.40 Aligned_cols=235 Identities=19% Similarity=0.150 Sum_probs=87.5
Q ss_pred CCceEEEecCCCCCcc---cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc-------CC
Q 018930 94 QYKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-------ED 163 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-------~~ 163 (348)
....||||.|++.+.. ....+++.|...||.|+-+-+.- +....+..++++.+++|.++++.+. ..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS----Sy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS----SYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG----GBTTS-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC----ccCCcCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 3558999999988765 45678889987799999998652 1122334588888999888887652 12
Q ss_pred CcEEEEEECHHHHHHHHHHHhCC-----cccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCC-CCCCC
Q 018930 164 EKVILVGHSSGGACVSYALEHFP-----QKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNG-KDKPP 237 (348)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 237 (348)
++|+|+|||.|+.-++.|+.... ..|.++||-+|....+....... . .....+........+.... ....+
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~--~-~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLG--E-REAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHH--H----HHHHHHHHHHHHHCT-TT-GG-
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhccc--c-hHHHHHHHHHHHHHHHcCCCCceee
Confidence 48999999999999999987642 56999999999776553322111 0 0011111111111111110 00000
Q ss_pred C--------chhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHH-H
Q 018930 238 T--------GFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQ-E 308 (348)
Q Consensus 238 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~-~ 308 (348)
. ........+..+. ....+-......+....+...+..+. +|+|++++++|..+|...- +
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~---s~~gdDD~FSSDL~de~l~~tfG~v~--------~plLvl~Sg~DEyvP~~vdk~ 253 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLA---SPGGDDDYFSSDLSDERLKKTFGKVS--------KPLLVLYSGKDEYVPPWVDKE 253 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S----SSHHHHTHHHHHTT-HHHHTGGG----------S-EEEEEE--TT---------
T ss_pred ccccccccCCCcccHHHHHhcc---CCCCcccccCCCCCHHHHHHHhccCC--------CceEEEecCCCceeccccccc
Confidence 0 0000111111111 11111111112222222223333333 7999999999999987652 3
Q ss_pred HHHHhCCC--------CcEEEecCCCCCCCccChH----HHHHHHHHHhc
Q 018930 309 KLVRENPP--------EGVYKIKGSDHCPFFSKPQ----SLHKILVEIAQ 346 (348)
Q Consensus 309 ~~~~~~~~--------~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~ 346 (348)
.+.+++.. ...-+|||++|.+--+..+ .+.+.+..||+
T Consensus 254 ~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 254 ALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 33333321 1234799999998654333 46777777774
No 91
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.53 E-value=7.2e-13 Score=124.99 Aligned_cols=119 Identities=13% Similarity=0.010 Sum_probs=87.5
Q ss_pred cccCCeeeee--eec--CCCCceEEEecCCCCCcc---cH-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhh
Q 018930 79 SLSNGKQDTN--ILE--NIQYKKFVLIHGEGFGAW---CW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYS 150 (348)
Q Consensus 79 ~~~~g~~~~~--~~~--~~~~~~vvllHG~~~~~~---~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 150 (348)
|..+|..+.. +.. .++.|+||++||++.... .+ ......|.++||.|+++|+||+|.|+..... .+ ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe-cC-cccc
Confidence 4456666652 221 235689999999987653 22 2345678888999999999999999753222 22 4566
Q ss_pred HHHHHHHHhhcC----CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccc
Q 018930 151 KPLLDYLENLLE----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 151 ~~l~~~l~~l~~----~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
+|+.++++.+.. +.++.++|||+||.+++.+|..+|++++++|..++..
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 677777766532 2499999999999999999999999999999888764
No 92
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.53 E-value=9.9e-13 Score=111.89 Aligned_cols=113 Identities=21% Similarity=0.300 Sum_probs=95.0
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhC---CCeEEEeCCCCCCCCCCC-----CCCCCChHhhhHHHHHHHHhhc-----
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEV---GLIPTALDLKGSGIDLSD-----TNSVTTLAEYSKPLLDYLENLL----- 161 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~---G~~vi~~D~~G~G~S~~~-----~~~~~~~~~~~~~l~~~l~~l~----- 161 (348)
...+||++|.+|-.+.|..+++.|.++ .+.|+++.+.||-.++.. ....++++++++...++++++-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 357999999999999999999988854 699999999999887654 4577899999998888887753
Q ss_pred CCCcEEEEEECHHHHHHHHHHHhCC---cccceEEEecccccCCCCChh
Q 018930 162 EDEKVILVGHSSGGACVSYALEHFP---QKISKAIFLCATMVSDGQRPF 207 (348)
Q Consensus 162 ~~~~v~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~ 207 (348)
.+.+++|+|||.|++++++++.+++ .+|.+++++-|+......+..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~ 130 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPN 130 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCch
Confidence 3358999999999999999999999 789999999998755444433
No 93
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.53 E-value=2.3e-12 Score=102.81 Aligned_cols=182 Identities=15% Similarity=0.238 Sum_probs=113.0
Q ss_pred EEEecCCCCCcccHHH--HHHHHHhCC--CeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECH
Q 018930 98 FVLIHGEGFGAWCWYK--TVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (348)
Q Consensus 98 vvllHG~~~~~~~~~~--~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (348)
|+++||+.++...... +.+.+.+.+ ..++.+|++ ....+..+.+.++++....+ .+.|||+||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~-~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE-NVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC-CeEEEEECh
Confidence 7999999999987754 455676654 455666654 35677778888899888765 699999999
Q ss_pred HHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhcc
Q 018930 174 GGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFN 253 (348)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
||+.|..+|.+++ +.+ |+++|+... ...+....+... .........+....+.+
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p-----~~~l~~~iG~~~--------------~~~~~e~~~~~~~~~~~---- 122 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRP-----YELLQDYIGEQT--------------NPYTGESYELTEEHIEE---- 122 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCH-----HHHHHHhhCccc--------------cCCCCccceechHhhhh----
Confidence 9999999999886 554 888987542 222222221110 00000001111110000
Q ss_pred CCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccC
Q 018930 254 QSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSK 333 (348)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 333 (348)
.+...... .. ...+++++.++.|.+++...+ .+...++..++.+|++|-+. +
T Consensus 123 -------------l~~l~~~~----~~------~~~~~lvll~~~DEvLd~~~a---~~~~~~~~~~i~~ggdH~f~--~ 174 (187)
T PF05728_consen 123 -------------LKALEVPY----PT------NPERYLVLLQTGDEVLDYREA---VAKYRGCAQIIEEGGDHSFQ--D 174 (187)
T ss_pred -------------cceEeccc----cC------CCccEEEEEecCCcccCHHHH---HHHhcCceEEEEeCCCCCCc--c
Confidence 00000000 00 136899999999999998544 44445666677788899864 5
Q ss_pred hHHHHHHHHHHhc
Q 018930 334 PQSLHKILVEIAQ 346 (348)
Q Consensus 334 p~~~~~~i~~fl~ 346 (348)
-++....|.+|++
T Consensus 175 f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 175 FEEYLPQIIAFLQ 187 (187)
T ss_pred HHHHHHHHHHhhC
Confidence 5677778888764
No 94
>COG0400 Predicted esterase [General function prediction only]
Probab=99.50 E-value=4.1e-13 Score=108.39 Aligned_cols=172 Identities=13% Similarity=0.057 Sum_probs=113.8
Q ss_pred CCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCC--CCCC---CCCCCCCCC-------hHhhhHHHHHHHHh
Q 018930 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKG--SGID---LSDTNSVTT-------LAEYSKPLLDYLEN 159 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G--~G~S---~~~~~~~~~-------~~~~~~~l~~~l~~ 159 (348)
++..|+||++||+|++...+.++...+... +.++.+--+= .|.- .......++ .+.+++.+..+.++
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999998866666553 6666543210 1100 001111222 23344444445555
Q ss_pred hcCC-CcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCC
Q 018930 160 LLED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPT 238 (348)
Q Consensus 160 l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (348)
.+++ ++++++|+|-|+++++.+..++|+.++++|++.+..+.....
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~--------------------------------- 140 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL--------------------------------- 140 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc---------------------------------
Confidence 5552 499999999999999999999999999999999865543210
Q ss_pred chhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC----
Q 018930 239 GFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN---- 314 (348)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~---- 314 (348)
.... ..+|+++++|+.|+++|......+.+.+
T Consensus 141 -------------------------------------~~~~-------~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g 176 (207)
T COG0400 141 -------------------------------------LPDL-------AGTPILLSHGTEDPVVPLALAEALAEYLTASG 176 (207)
T ss_pred -------------------------------------cccc-------CCCeEEEeccCcCCccCHHHHHHHHHHHHHcC
Confidence 0000 0379999999999999998877766654
Q ss_pred CCCcEEEecCCCCCCCccChHHHHHHHH
Q 018930 315 PPEGVYKIKGSDHCPFFSKPQSLHKILV 342 (348)
Q Consensus 315 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 342 (348)
-++++..++ .||.+..+.-+++.+.+.
T Consensus 177 ~~v~~~~~~-~GH~i~~e~~~~~~~wl~ 203 (207)
T COG0400 177 ADVEVRWHE-GGHEIPPEELEAARSWLA 203 (207)
T ss_pred CCEEEEEec-CCCcCCHHHHHHHHHHHH
Confidence 456777888 799986554444444333
No 95
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.49 E-value=2.3e-12 Score=117.41 Aligned_cols=103 Identities=12% Similarity=0.113 Sum_probs=86.1
Q ss_pred CceEEEecCCCCCcccH-----HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh----cCCCc
Q 018930 95 YKKFVLIHGEGFGAWCW-----YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LEDEK 165 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 165 (348)
++|||+++.+-.....| ..++++|.++||+|+++|+++-+.. ....++++|++.+.+.++.. +. ++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~----~r~~~ldDYv~~i~~Ald~V~~~tG~-~~ 289 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKA----HREWGLSTYVDALKEAVDAVRAITGS-RD 289 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChh----hcCCCHHHHHHHHHHHHHHHHHhcCC-CC
Confidence 57999999999777777 5799999999999999999987754 24468899988888877775 34 49
Q ss_pred EEEEEECHHHHHHHH----HHHhCCc-ccceEEEecccccCC
Q 018930 166 VILVGHSSGGACVSY----ALEHFPQ-KISKAIFLCATMVSD 202 (348)
Q Consensus 166 v~lvGhS~Gg~~a~~----~a~~~p~-~v~~lvl~~~~~~~~ 202 (348)
+.++|||+||.+++. +++++++ +|+.++++.+.....
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 999999999999886 7788885 899999999877654
No 96
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.48 E-value=1.2e-12 Score=110.68 Aligned_cols=116 Identities=16% Similarity=0.140 Sum_probs=98.8
Q ss_pred ccCCeeeeeee-cCC------CCceEEEecCCCCCcccHHHHHHHHHhC---------CCeEEEeCCCCCCCCCCCCCCC
Q 018930 80 LSNGKQDTNIL-ENI------QYKKFVLIHGEGFGAWCWYKTVASLEEV---------GLIPTALDLKGSGIDLSDTNSV 143 (348)
Q Consensus 80 ~~~g~~~~~~~-~~~------~~~~vvllHG~~~~~~~~~~~~~~L~~~---------G~~vi~~D~~G~G~S~~~~~~~ 143 (348)
...|.++++.. ... .-.+++++|||+++-+.|..+++.|.+- -|.||++.+||+|.|+.+....
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 35788887432 221 1238999999999999999999998764 2789999999999999888888
Q ss_pred CChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEec
Q 018930 144 TTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLC 196 (348)
Q Consensus 144 ~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 196 (348)
.+..+.|..+..++-.||.+ ++.+-|-.||+.|+..+|..+|++|.++=+-.
T Consensus 210 Fn~~a~ArvmrkLMlRLg~n-kffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRLGYN-KFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred ccHHHHHHHHHHHHHHhCcc-eeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 89999999999999999998 99999999999999999999999998875433
No 97
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.46 E-value=9.8e-12 Score=108.16 Aligned_cols=230 Identities=12% Similarity=0.071 Sum_probs=122.3
Q ss_pred eeeecccCCeeee--eee-c--CCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC---------
Q 018930 75 TLSESLSNGKQDT--NIL-E--NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT--------- 140 (348)
Q Consensus 75 ~~~~~~~~g~~~~--~~~-~--~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~--------- 140 (348)
.+.....+|..++ +.. . +++-|.||.+||.++....|...+. ++..||.|+.+|.+|+|....+.
T Consensus 58 ~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~ 136 (320)
T PF05448_consen 58 DVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLK 136 (320)
T ss_dssp EEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SS
T ss_pred EEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCc
Confidence 4455555677766 222 1 3345789999999999888877654 66679999999999999322110
Q ss_pred ----------CCCCChHhhhHHHHHHHHhhc----C-CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCC
Q 018930 141 ----------NSVTTLAEYSKPLLDYLENLL----E-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR 205 (348)
Q Consensus 141 ----------~~~~~~~~~~~~l~~~l~~l~----~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 205 (348)
...+-+.....|....++.+. . .+++.+.|.|.||.+++.+|+..+ +|++++...|+....
T Consensus 137 g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~--- 212 (320)
T PF05448_consen 137 GHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDF--- 212 (320)
T ss_dssp SSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSH---
T ss_pred cHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccch---
Confidence 001112223344444444432 1 148999999999999999999764 699999888864321
Q ss_pred hhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhc-cCCChHHHHHHHHhcCCCCCCcccccccCCcC
Q 018930 206 PFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYF-NQSPSKDVALAMASMRPTPLGPIMEKLSLSPE 284 (348)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (348)
...+........ + ..+..++. .+............+...+...+...+.
T Consensus 213 -~~~~~~~~~~~~-y------------------------~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~---- 262 (320)
T PF05448_consen 213 -RRALELRADEGP-Y------------------------PEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIK---- 262 (320)
T ss_dssp -HHHHHHT--STT-T------------------------HHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG------
T ss_pred -hhhhhcCCcccc-H------------------------HHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcC----
Confidence 111111000000 0 00000000 0001111112222233344444444444
Q ss_pred ccCCcceEEEEeCCCCCCCHHHHHHHHHhCC-CCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 285 KYGTGRRFFIQTLDDRALSPDVQEKLVRENP-PEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 285 ~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
+|+++-.|-.|.++|+..+-...+.++ ..++++++..||...-+ .-.+...+||+
T Consensus 263 ----~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~---~~~~~~~~~l~ 318 (320)
T PF05448_consen 263 ----CPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE---FQEDKQLNFLK 318 (320)
T ss_dssp ----SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH---HHHHHHHHHHH
T ss_pred ----CCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh---HHHHHHHHHHh
Confidence 999999999999999999999999886 45889999999976432 22555556654
No 98
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.45 E-value=2.1e-12 Score=102.33 Aligned_cols=246 Identities=17% Similarity=0.207 Sum_probs=134.4
Q ss_pred eeecccCCeeee--eeecCCCCc-eEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC--CCCChHhhh
Q 018930 76 LSESLSNGKQDT--NILENIQYK-KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN--SVTTLAEYS 150 (348)
Q Consensus 76 ~~~~~~~g~~~~--~~~~~~~~~-~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~--~~~~~~~~~ 150 (348)
...|..||..+. .+..++..+ -|+.-.+.+.....|++++..+.++||.|+.+|+||.|.|+.... ..+.+.|++
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA 87 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWA 87 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhh
Confidence 345566665554 233344444 566666666777788899999999999999999999999965322 335566655
Q ss_pred H-HHHHHHHhhc---CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchh--------
Q 018930 151 K-PLLDYLENLL---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAE-------- 218 (348)
Q Consensus 151 ~-~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-------- 218 (348)
. |+...++.++ ...+.+.||||+||.+.-.+.. ++ ++......+......+.- -..+.+....
T Consensus 88 ~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m---~~~~~l~~~~l~~lv~p~ 162 (281)
T COG4757 88 RLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWM---GLRERLGAVLLWNLVGPP 162 (281)
T ss_pred hcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEeccccccccch---hhhhcccceeeccccccc
Confidence 3 5555554443 2348999999999996655544 45 444444444332221110 0000000000
Q ss_pred --hhhhhhhhhhhcCCCCCCCCchhhHHHhhhhh-hccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEE
Q 018930 219 --RFMQESQFLIYGNGKDKPPTGFMFEKQQMKGL-YFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQ 295 (348)
Q Consensus 219 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~ 295 (348)
.+.......+.+.+.+.+......-....+.- ++...+ .. ....+.+..+ ++|++++.
T Consensus 163 lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp-~~----------~~~~q~yaaV--------rtPi~~~~ 223 (281)
T COG4757 163 LTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDP-AM----------RNYRQVYAAV--------RTPITFSR 223 (281)
T ss_pred hhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccCh-hH----------hHHHHHHHHh--------cCceeeec
Confidence 00001111111111111111000000000000 000000 00 0011112222 38999999
Q ss_pred eCCCCCCCHHHHHHHHHhCCCCcE--EEecC----CCCCCCccCh-HHHHHHHHHHh
Q 018930 296 TLDDRALSPDVQEKLVRENPPEGV--YKIKG----SDHCPFFSKP-QSLHKILVEIA 345 (348)
Q Consensus 296 G~~D~~vp~~~~~~~~~~~~~~~~--~~i~~----~gH~~~~e~p-~~~~~~i~~fl 345 (348)
..+|..+|+...+.+.+..+|+.+ ..++. -||+-.+-+| |.+.+.+.+|+
T Consensus 224 ~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 224 ALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 999999999999999998887744 44443 5999888887 88888887775
No 99
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.44 E-value=1e-12 Score=124.72 Aligned_cols=90 Identities=21% Similarity=0.169 Sum_probs=75.9
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCC---------CCC-------------CCChHhhhHH
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSD---------TNS-------------VTTLAEYSKP 152 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~---------~~~-------------~~~~~~~~~~ 152 (348)
.|+|||+||++++.+.|..+++.|.++||+|+++|+||||.|... ... ...+.+.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 368999999999999999999999988999999999999999443 111 1267889999
Q ss_pred HHHHHHhhc--------------C-CCcEEEEEECHHHHHHHHHHHh
Q 018930 153 LLDYLENLL--------------E-DEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 153 l~~~l~~l~--------------~-~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
+..+...++ . ..+++++||||||.++..++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 998888876 1 2489999999999999999974
No 100
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.44 E-value=5.1e-13 Score=90.78 Aligned_cols=64 Identities=20% Similarity=0.323 Sum_probs=58.7
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHH
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLE 158 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 158 (348)
+.+|+++||++.+...|..+++.|.++||.|+++|+||||.|+.......+++++++|+..+++
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 6699999999999999999999999999999999999999998766667799999999998874
No 101
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.43 E-value=2.8e-11 Score=100.96 Aligned_cols=160 Identities=16% Similarity=0.123 Sum_probs=117.5
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCC-CCCCCCC--C----C----CCChHhhhHHHHHHHHhhc--
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDT--N----S----VTTLAEYSKPLLDYLENLL-- 161 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~--~----~----~~~~~~~~~~l~~~l~~l~-- 161 (348)
.|.||++|++.+-......+.+.|+..||.|+++|+-+. |.+.... . . ..+..+...|+.+.++.|.
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 389999999999999999999999999999999998873 4332111 0 0 1223566677777777763
Q ss_pred ---CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCC
Q 018930 162 ---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPT 238 (348)
Q Consensus 162 ---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (348)
..++|.++|+||||.+++.++.+.| .|++.|..-+........
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~--------------------------------- 152 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTA--------------------------------- 152 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCccc---------------------------------
Confidence 1247999999999999999999876 688887766543211000
Q ss_pred chhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC---
Q 018930 239 GFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP--- 315 (348)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~--- 315 (348)
...++ ++|+++++|+.|..+|....+.+.+.+.
T Consensus 153 ------------------------------------~~~~~--------~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~ 188 (236)
T COG0412 153 ------------------------------------DAPKI--------KVPVLLHLAGEDPYIPAADVDALAAALEDAG 188 (236)
T ss_pred ------------------------------------ccccc--------cCcEEEEecccCCCCChhHHHHHHHHHHhcC
Confidence 00111 4899999999999999987766666552
Q ss_pred -CCcEEEecCCCCCCCcc
Q 018930 316 -PEGVYKIKGSDHCPFFS 332 (348)
Q Consensus 316 -~~~~~~i~~~gH~~~~e 332 (348)
..++.+++++.|.++-+
T Consensus 189 ~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 189 VKVDLEIYPGAGHGFAND 206 (236)
T ss_pred CCeeEEEeCCCccccccC
Confidence 56788999988988754
No 102
>PRK10115 protease 2; Provisional
Probab=99.41 E-value=1.8e-11 Score=117.54 Aligned_cols=127 Identities=16% Similarity=0.098 Sum_probs=94.5
Q ss_pred cceeeeecccCCeeeee--ee-----cCCCCceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCCC----
Q 018930 72 RRRTLSESLSNGKQDTN--IL-----ENIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLS---- 138 (348)
Q Consensus 72 ~~~~~~~~~~~g~~~~~--~~-----~~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~---- 138 (348)
..+.+..+..||..+.. .+ .+++.|+||++||..+... .|......|.++||.|+.++.||-|.-..
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 34556666778887763 12 2345689999999877664 47777778999999999999999765321
Q ss_pred ---CCCCCCChHhhhHHHHHHHHhhcC--CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccc
Q 018930 139 ---DTNSVTTLAEYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 139 ---~~~~~~~~~~~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
......+++|+++.+..++++ +. .+++.+.|.|.||+++..++.++|++++++|...|..
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 122335777777777666655 32 2599999999999999999998999999999887753
No 103
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.40 E-value=3.7e-11 Score=106.54 Aligned_cols=104 Identities=11% Similarity=0.056 Sum_probs=84.4
Q ss_pred ceEEEecCCCCCcccH-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHH
Q 018930 96 KKFVLIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (348)
|+||++.-+.+..... +.+++.|.+ |+.|+..|+..-+..+. .....+++++++-+.+++++++. +++++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~-~~~~f~ldDYi~~l~~~i~~~G~--~v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL-SAGKFDLEDYIDYLIEFIRFLGP--DIHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch-hcCCCCHHHHHHHHHHHHHHhCC--CCcEEEEchh
Confidence 7999999988666654 568899999 99999999987664421 24567999999999999999974 5999999999
Q ss_pred HHHHHHHHHhC-----CcccceEEEecccccCCC
Q 018930 175 GACVSYALEHF-----PQKISKAIFLCATMVSDG 203 (348)
Q Consensus 175 g~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~ 203 (348)
|..++.+++.+ |.+++.+++++++.....
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 99977666554 667999999999876653
No 104
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.37 E-value=5.1e-11 Score=88.98 Aligned_cols=160 Identities=19% Similarity=0.181 Sum_probs=114.9
Q ss_pred eEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCC-----CCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEE
Q 018930 97 KFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGID-----LSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (348)
Q Consensus 97 ~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S-----~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (348)
+||+-||.+.+.+ ....++..|+.+|+.|..|+++..-.- .+++....-...+...+.++...+..+ +.++-
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~g-pLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEG-PLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCC-ceeec
Confidence 7889999998877 467788999999999999999875432 122333334567778888888877765 99999
Q ss_pred EECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhh
Q 018930 170 GHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKG 249 (348)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (348)
||||||-++.+++...-..|.++++++=+....+... .
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe-~----------------------------------------- 132 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE-Q----------------------------------------- 132 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc-c-----------------------------------------
Confidence 9999999999998766556999998875543332110 0
Q ss_pred hhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCC
Q 018930 250 LYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCP 329 (348)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~ 329 (348)
.....+..+ ++|+||.+|+.|.+-..+.... +...+..++++++++.|..
T Consensus 133 ---------------------~Rt~HL~gl--------~tPtli~qGtrD~fGtr~~Va~-y~ls~~iev~wl~~adHDL 182 (213)
T COG3571 133 ---------------------LRTEHLTGL--------KTPTLITQGTRDEFGTRDEVAG-YALSDPIEVVWLEDADHDL 182 (213)
T ss_pred ---------------------chhhhccCC--------CCCeEEeecccccccCHHHHHh-hhcCCceEEEEeccCcccc
Confidence 000011112 3899999999999987766532 2233577999999999986
No 105
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.36 E-value=6.6e-11 Score=101.24 Aligned_cols=232 Identities=15% Similarity=0.171 Sum_probs=132.8
Q ss_pred CCCceEEEecCCCCCcccHH-HH-HHHHHhCCCeEEEeCCCCCCCCCCCCC---CCCChHh----------hhHHHHHHH
Q 018930 93 IQYKKFVLIHGEGFGAWCWY-KT-VASLEEVGLIPTALDLKGSGIDLSDTN---SVTTLAE----------YSKPLLDYL 157 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~-~~-~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~----------~~~~l~~~l 157 (348)
..+|.+|.++|.|......+ .+ +..|.+.|+..+.+..|-||.-.+... ...++.| -+..|..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 34788889999877444332 23 667777799999999999997643211 1112222 234555666
Q ss_pred HhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCC----C----CChhhHHHHhhcchhhhhhhhhhhhh
Q 018930 158 ENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD----G----QRPFDVFAEELGSAERFMQESQFLIY 229 (348)
Q Consensus 158 ~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (348)
+..+.. ++.|.|.||||.+|..+|...|..|..+-++++..... + ...++.+........ +.........
T Consensus 170 ~~~G~~-~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~-~~~~~~~~~~ 247 (348)
T PF09752_consen 170 EREGYG-PLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTV-YEEEISDIPA 247 (348)
T ss_pred HhcCCC-ceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccc-hhhhhccccc
Confidence 667887 99999999999999999999998877666666543211 1 011111211100000 0000000000
Q ss_pred cCCCCCCCCchhhHHHhhhhhhccCCC-hHHHHHHHHhcC-CCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHH
Q 018930 230 GNGKDKPPTGFMFEKQQMKGLYFNQSP-SKDVALAMASMR-PTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQ 307 (348)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~ 307 (348)
.... ..... ...... ..........+. ..+...+..... .-.++++.+++|.+||....
T Consensus 248 --------~~~~---~~~~~-~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~d-------p~~ii~V~A~~DaYVPr~~v 308 (348)
T PF09752_consen 248 --------QNKS---LPLDS-MEERRRDREALRFMRGVMDSFTHLTNFPVPVD-------PSAIIFVAAKNDAYVPRHGV 308 (348)
T ss_pred --------Cccc---ccchh-hccccchHHHHHHHHHHHHhhccccccCCCCC-------CCcEEEEEecCceEechhhc
Confidence 0000 00000 000000 111111111111 111111111111 23589999999999999988
Q ss_pred HHHHHhCCCCcEEEecCCCCC-CCccChHHHHHHHHHHhc
Q 018930 308 EKLVRENPPEGVYKIKGSDHC-PFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 308 ~~~~~~~~~~~~~~i~~~gH~-~~~e~p~~~~~~i~~fl~ 346 (348)
..+.+.+|++++..++| ||. .++-+.+.|.+.|.+-++
T Consensus 309 ~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 309 LSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred chHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 89999999999999996 998 566788999999988764
No 106
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.35 E-value=9.8e-11 Score=89.47 Aligned_cols=171 Identities=18% Similarity=0.197 Sum_probs=115.5
Q ss_pred ceEEEecCCCCCcc-cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHH
Q 018930 96 KKFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (348)
Q Consensus 96 ~~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (348)
+.+|++||+.++.. .|....+.-.. .+-.+++ +......+++|++.+.+.+... . ++++||+||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq--------~~w~~P~~~dWi~~l~~~v~a~-~-~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQ--------DDWEAPVLDDWIARLEKEVNAA-E-GPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhccc--------CCCCCCCHHHHHHHHHHHHhcc-C-CCeEEEEeccc
Confidence 57899999988775 57665432111 1222332 1234458999999999988887 3 47999999999
Q ss_pred HHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccC
Q 018930 175 GACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQ 254 (348)
Q Consensus 175 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (348)
+..++.++......|.|++|++|+..........
T Consensus 70 c~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~---------------------------------------------- 103 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPK---------------------------------------------- 103 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCCCccccccchh----------------------------------------------
Confidence 9999999988777899999999875432100000
Q ss_pred CChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCc---
Q 018930 255 SPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFF--- 331 (348)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~--- 331 (348)
....+...+. ..+ .-|.+++...+|++++.+.++.+++.+. +.++.+..+||+.-.
T Consensus 104 --------~~~tf~~~p~----~~l--------pfps~vvaSrnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~ 162 (181)
T COG3545 104 --------HLMTFDPIPR----EPL--------PFPSVVVASRNDPYVSYEHAEDLANAWG-SALVDVGEGGHINAESGF 162 (181)
T ss_pred --------hccccCCCcc----ccC--------CCceeEEEecCCCCCCHHHHHHHHHhcc-HhheecccccccchhhcC
Confidence 0000000000 111 1589999999999999999999999885 578888889998543
Q ss_pred cChHHHHHHHHHHhc
Q 018930 332 SKPQSLHKILVEIAQ 346 (348)
Q Consensus 332 e~p~~~~~~i~~fl~ 346 (348)
..-.+....+.+|+.
T Consensus 163 g~wpeg~~~l~~~~s 177 (181)
T COG3545 163 GPWPEGYALLAQLLS 177 (181)
T ss_pred CCcHHHHHHHHHHhh
Confidence 344556666666653
No 107
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.35 E-value=1.2e-11 Score=128.85 Aligned_cols=103 Identities=15% Similarity=0.036 Sum_probs=89.2
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
+++++++|+||++++...|..+.+.|.. ++.|+++|++|+|.+. ...++++++++++.+.++.+....+++++|||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 3467899999999999999999999977 5999999999998652 34579999999999999887654589999999
Q ss_pred HHHHHHHHHHHh---CCcccceEEEecccc
Q 018930 173 SGGACVSYALEH---FPQKISKAIFLCATM 199 (348)
Q Consensus 173 ~Gg~~a~~~a~~---~p~~v~~lvl~~~~~ 199 (348)
+||.+|..+|.+ .++++..++++++..
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999999985 578899999998754
No 108
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.34 E-value=5.7e-11 Score=99.02 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=89.3
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHH
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (348)
|+|+++|+.++...+|.++...|... ..|+.++.||+|.- .....+++++++...+.|.+.....+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~---~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAG---EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccc---ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 58999999999999999999999997 99999999999853 234469999999999999998877799999999999
Q ss_pred HHHHHHHHhC---CcccceEEEeccccc
Q 018930 176 ACVSYALEHF---PQKISKAIFLCATMV 200 (348)
Q Consensus 176 ~~a~~~a~~~---p~~v~~lvl~~~~~~ 200 (348)
.+|..+|.+. .+.|..++++++...
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999753 457999999999876
No 109
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.33 E-value=5.4e-11 Score=95.35 Aligned_cols=226 Identities=14% Similarity=0.063 Sum_probs=112.6
Q ss_pred ecccCCeeeeeeecC------CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCC-CCCCCCCCCCCChHhhh
Q 018930 78 ESLSNGKQDTNILEN------IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDTNSVTTLAEYS 150 (348)
Q Consensus 78 ~~~~~g~~~~~~~~~------~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~~~~~~~~~~ 150 (348)
....+|+++.+|... ...++||+.+|++.....|..++.+|+.+||+|+.||.-.| |.|+.. -..+++....
T Consensus 7 i~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~-I~eftms~g~ 85 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD-INEFTMSIGK 85 (294)
T ss_dssp EEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHH
T ss_pred eEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC-hhhcchHHhH
Confidence 345677777766532 23579999999999999999999999999999999998766 777653 4456887777
Q ss_pred HHHHHHHHhh---cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhh
Q 018930 151 KPLLDYLENL---LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFL 227 (348)
Q Consensus 151 ~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (348)
+++..+++.+ +.. ++.|+.-|+.|-+|+..|.+ + .+..+|..-+... ....+....+.- ++.....-
T Consensus 86 ~sL~~V~dwl~~~g~~-~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVGVVn-----lr~TLe~al~~D--yl~~~i~~ 155 (294)
T PF02273_consen 86 ASLLTVIDWLATRGIR-RIGLIAASLSARIAYEVAAD-I-NLSFLITAVGVVN-----LRDTLEKALGYD--YLQLPIEQ 155 (294)
T ss_dssp HHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTTT-S---SEEEEES--S------HHHHHHHHHSS---GGGS-GGG
T ss_pred HHHHHHHHHHHhcCCC-cchhhhhhhhHHHHHHHhhc-c-CcceEEEEeeeee-----HHHHHHHHhccc--hhhcchhh
Confidence 7766666554 565 89999999999999999985 3 4777777665332 212222211110 11100000
Q ss_pred hhcCCCCCCCCchhhH-HHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHH
Q 018930 228 IYGNGKDKPPTGFMFE-KQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDV 306 (348)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~ 306 (348)
+... ..-....+. +.+..+.+ .....+......++. ..++|++.+.+++|.+|-...
T Consensus 156 lp~d---ldfeGh~l~~~vFv~dc~--------------e~~w~~l~ST~~~~k-----~l~iP~iaF~A~~D~WV~q~e 213 (294)
T PF02273_consen 156 LPED---LDFEGHNLGAEVFVTDCF--------------EHGWDDLDSTINDMK-----RLSIPFIAFTANDDDWVKQSE 213 (294)
T ss_dssp --SE---EEETTEEEEHHHHHHHHH--------------HTT-SSHHHHHHHHT-----T--S-EEEEEETT-TTS-HHH
T ss_pred CCCc---ccccccccchHHHHHHHH--------------HcCCccchhHHHHHh-----hCCCCEEEEEeCCCccccHHH
Confidence 0000 000000011 11111111 111112212222221 114999999999999999888
Q ss_pred HHHHHHhC--CCCcEEEecCCCCCCCccChHHH
Q 018930 307 QEKLVREN--PPEGVYKIKGSDHCPFFSKPQSL 337 (348)
Q Consensus 307 ~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~ 337 (348)
...+...+ +..+++.++|++|-.- |+|-.+
T Consensus 214 V~~~~~~~~s~~~klysl~Gs~HdL~-enl~vl 245 (294)
T PF02273_consen 214 VEELLDNINSNKCKLYSLPGSSHDLG-ENLVVL 245 (294)
T ss_dssp HHHHHTT-TT--EEEEEETT-SS-TT-SSHHHH
T ss_pred HHHHHHhcCCCceeEEEecCccchhh-hChHHH
Confidence 88888755 4568999999999863 556433
No 110
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.32 E-value=2.1e-11 Score=99.13 Aligned_cols=227 Identities=14% Similarity=0.108 Sum_probs=133.6
Q ss_pred eeeecccCCeeeeeee-----cCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCC----CC----
Q 018930 75 TLSESLSNGKQDTNIL-----ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSD----TN---- 141 (348)
Q Consensus 75 ~~~~~~~~g~~~~~~~-----~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~----~~---- 141 (348)
.++.+-.+|..+.-|+ +.+.-|.||-.||++++.+.|..+...-. .||.|+.+|.||.|.|+.+ +.
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~ 136 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSD 136 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCcC
Confidence 3444555666666222 22456899999999999999987776444 4999999999999988321 11
Q ss_pred ------------CCCChHhhhHHHHHHHHhh---c--CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCC
Q 018930 142 ------------SVTTLAEYSKPLLDYLENL---L--EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQ 204 (348)
Q Consensus 142 ------------~~~~~~~~~~~l~~~l~~l---~--~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 204 (348)
..+-+.....|+..+++.+ . ..+++.+.|.|.||.+++.+++.. .+|++++..-|....-.
T Consensus 137 pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~-~rik~~~~~~Pfl~df~- 214 (321)
T COG3458 137 PGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD-PRIKAVVADYPFLSDFP- 214 (321)
T ss_pred CceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC-hhhhcccccccccccch-
Confidence 1112223334444444443 1 125999999999999999999865 47999888777543211
Q ss_pred ChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcC
Q 018930 205 RPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPE 284 (348)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (348)
...+. .... .. ..+..++....+. ....+..+...+...+...++
T Consensus 215 r~i~~-----~~~~-~y-----------------------dei~~y~k~h~~~--e~~v~~TL~yfD~~n~A~RiK---- 259 (321)
T COG3458 215 RAIEL-----ATEG-PY-----------------------DEIQTYFKRHDPK--EAEVFETLSYFDIVNLAARIK---- 259 (321)
T ss_pred hheee-----cccC-cH-----------------------HHHHHHHHhcCch--HHHHHHHHhhhhhhhHHHhhc----
Confidence 00000 0000 00 0000001001111 112223333334444444443
Q ss_pred ccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCC-cEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 285 KYGTGRRFFIQTLDDRALSPDVQEKLVRENPPE-GVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 285 ~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
+|+|+..|-.|.++|+..+-.+++.++.. ++.+++.-+|.-. |.-..+.+..|++
T Consensus 260 ----~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~ 315 (321)
T COG3458 260 ----VPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLK 315 (321)
T ss_pred ----cceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC---cchhHHHHHHHHH
Confidence 99999999999999999999999988755 5556776567643 3333344444443
No 111
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.31 E-value=2.7e-11 Score=100.20 Aligned_cols=106 Identities=26% Similarity=0.204 Sum_probs=76.0
Q ss_pred CCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh-h------cCCC
Q 018930 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN-L------LEDE 164 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~-l------~~~~ 164 (348)
.+.-|+|||+||+......|..++++++..||-|+++|+...+... .........+.++.+.+-++. + +. .
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~-~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~-s 91 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD-DTDEVASAAEVIDWLAKGLESKLPLGVKPDF-S 91 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC-cchhHHHHHHHHHHHHhcchhhccccccccc-c
Confidence 4567899999999987778899999999999999999976644311 111112222333332221211 1 23 3
Q ss_pred cEEEEEECHHHHHHHHHHHhC-----CcccceEEEecccc
Q 018930 165 KVILVGHSSGGACVSYALEHF-----PQKISKAIFLCATM 199 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~ 199 (348)
++.|.|||-||-+|..++..+ +.+++++|+++|.-
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 899999999999999999887 55899999999964
No 112
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.26 E-value=8.7e-11 Score=97.30 Aligned_cols=105 Identities=22% Similarity=0.121 Sum_probs=72.7
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHh--------CCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHH----HHHHHhh-
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEE--------VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPL----LDYLENL- 160 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~--------~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l----~~~l~~l- 160 (348)
.+.+||||||.+++...|+.+...+.+ ..++++++|+...... .....+.+.++.+ ..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~----~~g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA----FHGRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccc----cccccHHHHHHHHHHHHHHHHHhhh
Confidence 567999999999999998888776632 1478999998764321 1112344433333 3333333
Q ss_pred ---cCCCcEEEEEECHHHHHHHHHHHhCC---cccceEEEecccccCC
Q 018930 161 ---LEDEKVILVGHSSGGACVSYALEHFP---QKISKAIFLCATMVSD 202 (348)
Q Consensus 161 ---~~~~~v~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~ 202 (348)
...++++||||||||.+|..++...+ +.|+.+|.++++....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 22359999999999999988886533 4799999999876554
No 113
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.26 E-value=1.3e-10 Score=100.71 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=81.0
Q ss_pred CceEEEecCCCCCcccH-----HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhh-H----HHHHHHHhhcCCC
Q 018930 95 YKKFVLIHGEGFGAWCW-----YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYS-K----PLLDYLENLLEDE 164 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~----~l~~~l~~l~~~~ 164 (348)
+++++++|-+-.....| ..++..|.++|+.|..+|+++-..+.. ..++++++ + .+..+.+..+.+
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~- 181 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQK- 181 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCcc-
Confidence 56999999998877766 358888999999999999998766532 34666666 3 444444555665
Q ss_pred cEEEEEECHHHHHHHHHHHhCCcc-cceEEEecccccCC
Q 018930 165 KVILVGHSSGGACVSYALEHFPQK-ISKAIFLCATMVSD 202 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~ 202 (348)
+|.++|||.||.++..+++.++.+ |+.++++.+...+.
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 999999999999999999888887 99999988876554
No 114
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.23 E-value=6.9e-10 Score=92.90 Aligned_cols=202 Identities=20% Similarity=0.231 Sum_probs=117.4
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHH-hCCC--eE--EEeCCCCC----CCCCC-----------CCCCCCChHhhhHHH
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLE-EVGL--IP--TALDLKGS----GIDLS-----------DTNSVTTLAEYSKPL 153 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~-~~G~--~v--i~~D~~G~----G~S~~-----------~~~~~~~~~~~~~~l 153 (348)
...|.|||||++++...+..++..+. +.|. .+ +.++--|. |.=.. ..+...++...+..+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 45689999999999999999999998 6543 23 33333332 21110 011213677888888
Q ss_pred HHHHHhh----cCCCcEEEEEECHHHHHHHHHHHhCCc-----ccceEEEecccccCCCCChhhHHHHhhcchhhhhhhh
Q 018930 154 LDYLENL----LEDEKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQES 224 (348)
Q Consensus 154 ~~~l~~l----~~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (348)
..+|..| +++ ++.+|||||||..++.++..+.. ++.++|.+++++......... ..
T Consensus 90 ~~vl~~L~~~Y~~~-~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~---~~----------- 154 (255)
T PF06028_consen 90 KKVLKYLKKKYHFK-KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDD---QN----------- 154 (255)
T ss_dssp HHHHHHHHHCC--S-EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC----TT-----------
T ss_pred HHHHHHHHHhcCCC-EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccccccc---ch-----------
Confidence 8888776 455 99999999999999999887532 589999999875432111000 00
Q ss_pred hhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeC------C
Q 018930 225 QFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTL------D 298 (348)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~------~ 298 (348)
...+...+ +.. ....+. ......+ ..++ .++.||-|+|. .
T Consensus 155 ~~~~~~~g----p~~---~~~~y~-------------~l~~~~~--------~~~p------~~i~VLnI~G~~~~g~~s 200 (255)
T PF06028_consen 155 QNDLNKNG----PKS---MTPMYQ-------------DLLKNRR--------KNFP------KNIQVLNIYGDLEDGSNS 200 (255)
T ss_dssp TT-CSTT-----BSS-----HHHH-------------HHHHTHG--------GGST------TT-EEEEEEEESBTTCSB
T ss_pred hhhhcccC----Ccc---cCHHHH-------------HHHHHHH--------hhCC------CCeEEEEEecccCCCCCC
Confidence 00000000 000 000111 1111100 0000 13789999998 8
Q ss_pred CCCCCHHHHHHHHHhCCC----CcEEEecC--CCCCCCccChHHHHHHHHHHh
Q 018930 299 DRALSPDVQEKLVRENPP----EGVYKIKG--SDHCPFFSKPQSLHKILVEIA 345 (348)
Q Consensus 299 D~~vp~~~~~~~~~~~~~----~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl 345 (348)
|-.||...+..+...+.+ .+-.++.| +.|.-..|++ +|.+.|.+||
T Consensus 201 DG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 201 DGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp TSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred CeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 999999988777776643 24445654 6899877777 5779999997
No 115
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.23 E-value=2.5e-10 Score=94.43 Aligned_cols=98 Identities=20% Similarity=0.246 Sum_probs=61.5
Q ss_pred EEEecCCCCCcc---cHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh-----hcCCCcEEE
Q 018930 98 FVLIHGEGFGAW---CWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN-----LLEDEKVIL 168 (348)
Q Consensus 98 vvllHG~~~~~~---~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~-----l~~~~~v~l 168 (348)
||++||.+.... ....+...+.+ .|+.|+.+|+|=..+. .....++|..+.+..++++ .+. ++++|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~----~~p~~~~D~~~a~~~l~~~~~~~~~d~-~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA----PFPAALEDVKAAYRWLLKNADKLGIDP-ERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS----STTHHHHHHHHHHHHHHHTHHHHTEEE-EEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc----cccccccccccceeeeccccccccccc-cceEE
Confidence 799999875433 44556666664 7999999999843221 1112334444444444444 233 49999
Q ss_pred EEECHHHHHHHHHHHhCCc----ccceEEEeccccc
Q 018930 169 VGHSSGGACVSYALEHFPQ----KISKAIFLCATMV 200 (348)
Q Consensus 169 vGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~ 200 (348)
+|+|-||.+++.++....+ .++++++++|...
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 9999999999999875433 3899999999643
No 116
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.20 E-value=1.3e-09 Score=96.55 Aligned_cols=126 Identities=19% Similarity=0.129 Sum_probs=89.3
Q ss_pred eeeecccCCeeeeee---ecCCCCceEEEecCCCCCcccHHH------HHHHHHhCCCeEEEeCCCCCCCCCC----CC-
Q 018930 75 TLSESLSNGKQDTNI---LENIQYKKFVLIHGEGFGAWCWYK------TVASLEEVGLIPTALDLKGSGIDLS----DT- 140 (348)
Q Consensus 75 ~~~~~~~~g~~~~~~---~~~~~~~~vvllHG~~~~~~~~~~------~~~~L~~~G~~vi~~D~~G~G~S~~----~~- 140 (348)
.....+.||..+... ...+++|+|+|.||+..++..|-. +.=.|+++||.|..-+.||--.|.. .+
T Consensus 50 ~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~ 129 (403)
T KOG2624|consen 50 EHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPS 129 (403)
T ss_pred EEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCc
Confidence 344445577644422 233678999999999999999943 4556889999999999999776632 11
Q ss_pred ----CCCCChHhhhH-HHHHHH----HhhcCCCcEEEEEECHHHHHHHHHHHhCCc---ccceEEEecccccC
Q 018930 141 ----NSVTTLAEYSK-PLLDYL----ENLLEDEKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMVS 201 (348)
Q Consensus 141 ----~~~~~~~~~~~-~l~~~l----~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 201 (348)
.-.+++.+++. ||-+.| +.-+.. +++.||||.|+.....++...|+ +|+..++++|....
T Consensus 130 ~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~-kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 130 SDKEFWDFSWHEMGTYDLPAMIDYILEKTGQE-KLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred CCcceeecchhhhhhcCHHHHHHHHHHhcccc-ceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 12345555432 444444 444554 99999999999999888887765 79999999998743
No 117
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.20 E-value=2.1e-10 Score=89.42 Aligned_cols=203 Identities=14% Similarity=0.108 Sum_probs=121.2
Q ss_pred eeeeecCCCCceEEEecCCCC---CcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcC
Q 018930 86 DTNILENIQYKKFVLIHGEGF---GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE 162 (348)
Q Consensus 86 ~~~~~~~~~~~~vvllHG~~~---~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (348)
+.+|......+.+||+||.-- +...-...+..+.++||+|..++ ||.+.....-..++.+...-+.-+++....
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q~htL~qt~~~~~~gv~filk~~~n 134 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQVHTLEQTMTQFTHGVNFILKYTEN 134 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCcccccHHHHHHHHHHHHHHHHHhccc
Confidence 335555677899999999632 22223345555666799999886 454432211223445555555555565554
Q ss_pred CCcEEEEEECHHHHHHHHHHHh-CCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchh
Q 018930 163 DEKVILVGHSSGGACVSYALEH-FPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFM 241 (348)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (348)
...+.+-|||-|+.+|..+..+ +..+|.+++++++..... +.... . .. ..+.
T Consensus 135 ~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~---------EL~~t-e----------~g-------~dlg 187 (270)
T KOG4627|consen 135 TKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLR---------ELSNT-E----------SG-------NDLG 187 (270)
T ss_pred ceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHH---------HHhCC-c----------cc-------cccC
Confidence 4478888999999999888755 456899999988754211 00000 0 00 0000
Q ss_pred hHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEE
Q 018930 242 FEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYK 321 (348)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~ 321 (348)
+..+. .... ......+..+ ++|+|++.|++|.-.-.+..+.+.+....+.+..
T Consensus 188 Lt~~~-------------ae~~------Scdl~~~~~v--------~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~ 240 (270)
T KOG4627|consen 188 LTERN-------------AESV------SCDLWEYTDV--------TVWILVVAAEHESPKLIEQNRDFADQLRKASFTL 240 (270)
T ss_pred cccch-------------hhhc------CccHHHhcCc--------eeeeeEeeecccCcHHHHhhhhHHHHhhhcceee
Confidence 00000 0000 0000011112 3799999999998777778888999888899999
Q ss_pred ecCCCCCCCccC----hHHHHHHHHHHh
Q 018930 322 IKGSDHCPFFSK----PQSLHKILVEIA 345 (348)
Q Consensus 322 i~~~gH~~~~e~----p~~~~~~i~~fl 345 (348)
++|.+|+-.+++ ...+...+..|+
T Consensus 241 f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 241 FKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred cCCcchhhHHHHhccccchHHHHHHHHh
Confidence 999999976653 234555666654
No 118
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.20 E-value=1.2e-10 Score=96.11 Aligned_cols=164 Identities=20% Similarity=0.167 Sum_probs=87.9
Q ss_pred CCceEEEecCCCCCcccHHHHH----HHHHhCCCeEEEeCCCCC-----CCCCC------------------C----CCC
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTV----ASLEEVGLIPTALDLKGS-----GIDLS------------------D----TNS 142 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~----~~L~~~G~~vi~~D~~G~-----G~S~~------------------~----~~~ 142 (348)
.++.||||||++.++..|.... ..|.+.++.++.+|-|-- |.... . ...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4578999999999999987654 445442588888875421 11100 0 011
Q ss_pred CCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhC--------CcccceEEEecccccCCCCChhhHHHHhh
Q 018930 143 VTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF--------PQKISKAIFLCATMVSDGQRPFDVFAEEL 214 (348)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~--------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 214 (348)
...+++..+.|.++++..+. -..|+|+|.||.+|..++... ...++.+|+++++.+....
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred ccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 23456666677777777662 357999999999998887532 1247888888876442110
Q ss_pred cchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEE
Q 018930 215 GSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFI 294 (348)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i 294 (348)
+.. .+ .... +++|+|.|
T Consensus 151 --------------------------------~~~---------------------~~--~~~~--------i~iPtlHv 167 (212)
T PF03959_consen 151 --------------------------------YQE---------------------LY--DEPK--------ISIPTLHV 167 (212)
T ss_dssp --------------------------------GTT---------------------TT----TT-----------EEEEE
T ss_pred --------------------------------hhh---------------------hh--cccc--------CCCCeEEE
Confidence 000 00 0011 13899999
Q ss_pred EeCCCCCCCHHHHHHHHHhCCC-CcEEEecCCCCCCCccC
Q 018930 295 QTLDDRALSPDVQEKLVRENPP-EGVYKIKGSDHCPFFSK 333 (348)
Q Consensus 295 ~G~~D~~vp~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~ 333 (348)
+|++|.+++++..+.+.+.+.+ .+++..+ +||.+....
T Consensus 168 ~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~ 206 (212)
T PF03959_consen 168 IGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKK 206 (212)
T ss_dssp EETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----H
T ss_pred EeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCCh
Confidence 9999999999998899888876 7777777 589987653
No 119
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.19 E-value=4.2e-10 Score=88.08 Aligned_cols=98 Identities=15% Similarity=0.209 Sum_probs=76.4
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh----cCCCcEEEEEE
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LEDEKVILVGH 171 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~v~lvGh 171 (348)
..+||+-|=++....=..+++.|+++|+.|+.+|-+-|=.+ ..+.++.+.|+..++++. +.+ +++|+|+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~------~rtP~~~a~Dl~~~i~~y~~~w~~~-~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWS------ERTPEQTAADLARIIRHYRARWGRK-RVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhh------hCCHHHHHHHHHHHHHHHHHHhCCc-eEEEEee
Confidence 45788888777765556788999999999999995543333 347778888888877664 454 9999999
Q ss_pred CHHHHHHHHHHHhCC----cccceEEEeccccc
Q 018930 172 SSGGACVSYALEHFP----QKISKAIFLCATMV 200 (348)
Q Consensus 172 S~Gg~~a~~~a~~~p----~~v~~lvl~~~~~~ 200 (348)
|+|+-+......+.| ++|+.++|+++...
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 999998888887777 47899999988643
No 120
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.16 E-value=3.7e-10 Score=97.13 Aligned_cols=107 Identities=14% Similarity=0.091 Sum_probs=70.6
Q ss_pred CCCceEEEecCCCCCccc-HHHH---------HHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhH---HHHHHHHh
Q 018930 93 IQYKKFVLIHGEGFGAWC-WYKT---------VASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSK---PLLDYLEN 159 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~-~~~~---------~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~---~l~~~l~~ 159 (348)
+.-|+||..|+++.+... .... ...+.++||.|+..|.||.|.|+...... ....++ ++.+++.+
T Consensus 18 ~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~--~~~e~~D~~d~I~W~~~ 95 (272)
T PF02129_consen 18 GPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM--SPNEAQDGYDTIEWIAA 95 (272)
T ss_dssp SSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--SHHHHHHHHHHHHHHHH
T ss_pred CcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--ChhHHHHHHHHHHHHHh
Confidence 456789999999865421 2111 12388899999999999999997533321 333444 44444444
Q ss_pred hcC-CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccC
Q 018930 160 LLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (348)
Q Consensus 160 l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (348)
..- +.+|.++|.|++|..++.+|...|..+++++...+....
T Consensus 96 Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 96 QPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp CTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred CCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 321 249999999999999999999888899999988776543
No 121
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.15 E-value=1.9e-09 Score=88.23 Aligned_cols=108 Identities=15% Similarity=0.107 Sum_probs=70.5
Q ss_pred CCceEEEecCCCCCcccHHHH--HHHHHh-CCCeEEEeCCCCCCCCC--C------CCCCCCChHhhhHHHHHHHHhhcC
Q 018930 94 QYKKFVLIHGEGFGAWCWYKT--VASLEE-VGLIPTALDLKGSGIDL--S------DTNSVTTLAEYSKPLLDYLENLLE 162 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~--~~~L~~-~G~~vi~~D~~G~G~S~--~------~~~~~~~~~~~~~~l~~~l~~l~~ 162 (348)
+.|.||++||.+.+...+... ...|++ +||-|+.++........ . ......+...++..+..+..+.++
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 458999999999999876542 234444 58889988854321110 0 011111222233333334444444
Q ss_pred C-CcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccC
Q 018930 163 D-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (348)
Q Consensus 163 ~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (348)
+ .+|++.|+|.||+++..++..+|+.+.++..+++....
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~ 134 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYG 134 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccc
Confidence 3 48999999999999999999999999998888776543
No 122
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.15 E-value=2.6e-09 Score=103.50 Aligned_cols=85 Identities=12% Similarity=-0.021 Sum_probs=62.7
Q ss_pred HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc-------------------CCCcEEEEEECH
Q 018930 113 KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-------------------EDEKVILVGHSS 173 (348)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-------------------~~~~v~lvGhS~ 173 (348)
.+.+.|..+||.|+.+|.||.|.|+.... ... .+..+|..++|+-+. .+.+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~-~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT-TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc-cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 45678889999999999999999976322 111 233344444444332 024999999999
Q ss_pred HHHHHHHHHHhCCcccceEEEecccc
Q 018930 174 GGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
||.+++.+|...|+.++++|..++..
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 99999999998888999999877653
No 123
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.15 E-value=3.7e-09 Score=83.98 Aligned_cols=175 Identities=13% Similarity=0.083 Sum_probs=111.8
Q ss_pred CCceEEEecCCCCCcccHHH----HHHHHHhCCCeEEEeCCCC----CCCCC--C------C-----------------C
Q 018930 94 QYKKFVLIHGEGFGAWCWYK----TVASLEEVGLIPTALDLKG----SGIDL--S------D-----------------T 140 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~----~~~~L~~~G~~vi~~D~~G----~G~S~--~------~-----------------~ 140 (348)
.++-|+||||+-.+...|.. +-+.|.+. +..+.+|-|- -+.++ . + .
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 45789999999999998754 44556665 7777777662 01110 0 0 0
Q ss_pred CCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCC------c--ccceEEEecccccCCCCChhhHHHH
Q 018930 141 NSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP------Q--KISKAIFLCATMVSDGQRPFDVFAE 212 (348)
Q Consensus 141 ~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p------~--~v~~lvl~~~~~~~~~~~~~~~~~~ 212 (348)
.....++.-.+-|++++++.|. =-.|+|+|.|+.++..++..-. + .++-+|+++++...... .
T Consensus 83 ~~~~~~eesl~yl~~~i~enGP--FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~-----~-- 153 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGP--FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK-----L-- 153 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCC--CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch-----h--
Confidence 1122345556777777777774 2279999999999888876211 1 25677777765332100 0
Q ss_pred hhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceE
Q 018930 213 ELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRF 292 (348)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl 292 (348)
... .....+ ++|.|
T Consensus 154 ------------------------------~~~----------------------------~~~~~i--------~~PSL 167 (230)
T KOG2551|consen 154 ------------------------------DES----------------------------AYKRPL--------STPSL 167 (230)
T ss_pred ------------------------------hhh----------------------------hhccCC--------CCCee
Confidence 000 000111 49999
Q ss_pred EEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccCh--HHHHHHHHHHh
Q 018930 293 FIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKP--QSLHKILVEIA 345 (348)
Q Consensus 293 ~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl 345 (348)
.|.|+.|.++|....+.+++.+++..++.-+ +||++.-.++ +.+.+.|.+++
T Consensus 168 Hi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 168 HIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFL 221 (230)
T ss_pred EEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999998665555 6999887653 33444444443
No 124
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.13 E-value=8.8e-10 Score=98.32 Aligned_cols=105 Identities=20% Similarity=0.246 Sum_probs=60.9
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCC-CCCC-----C-----C------CC-------CC---CC
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDL-----S-----D------TN-------SV---TT 145 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~-----~-----~------~~-------~~---~~ 145 (348)
++-|+|||-||++++...|..++..|+.+||-|+++|+|.. +-.. . . .. .. ..
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 44689999999999999999999999999999999999943 2110 0 0 00 00 00
Q ss_pred -------hHhhhHHHHHHHHhh--------------------------cCCCcEEEEEECHHHHHHHHHHHhCCcccceE
Q 018930 146 -------LAEYSKPLLDYLENL--------------------------LEDEKVILVGHSSGGACVSYALEHFPQKISKA 192 (348)
Q Consensus 146 -------~~~~~~~l~~~l~~l--------------------------~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~l 192 (348)
++.-++++..+++.+ .. +++.++|||+||..++.++... .++++.
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~-~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDL-SRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEE-EEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcch-hheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 111122333333222 12 3799999999999999888764 789999
Q ss_pred EEecccc
Q 018930 193 IFLCATM 199 (348)
Q Consensus 193 vl~~~~~ 199 (348)
|++++..
T Consensus 256 I~LD~W~ 262 (379)
T PF03403_consen 256 ILLDPWM 262 (379)
T ss_dssp EEES---
T ss_pred EEeCCcc
Confidence 9999964
No 125
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.12 E-value=5.6e-09 Score=84.05 Aligned_cols=240 Identities=14% Similarity=0.109 Sum_probs=141.0
Q ss_pred CCCCceEEEecCCCCCcccHHHHHHHHHhCC---CeEEEeCCCCCCCCC--------CCCCCCCChHhhhHHHHHHHHhh
Q 018930 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVG---LIPTALDLKGSGIDL--------SDTNSVTTLAEYSKPLLDYLENL 160 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G---~~vi~~D~~G~G~S~--------~~~~~~~~~~~~~~~l~~~l~~l 160 (348)
....+.+++++|.++....|.++...|..+- +.++.+...||-.-+ ......++++++++.=.++++..
T Consensus 26 ~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 3567899999999999999999988876541 558998888886542 11235678999999888888775
Q ss_pred -cCCCcEEEEEECHHHHHHHHHHHhC--CcccceEEEecccccCCCCChhhHHHH----------------hhcchhhhh
Q 018930 161 -LEDEKVILVGHSSGGACVSYALEHF--PQKISKAIFLCATMVSDGQRPFDVFAE----------------ELGSAERFM 221 (348)
Q Consensus 161 -~~~~~v~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~ 221 (348)
..+.+++++|||-|+++.+.+.... --.|.+++++=|....-..+....... .+...+.++
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 3446999999999999999988632 235788888877643221111110000 000011111
Q ss_pred hhhhhhhhcCCCCCCCCch----hhH-HHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEe
Q 018930 222 QESQFLIYGNGKDKPPTGF----MFE-KQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQT 296 (348)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G 296 (348)
+.....+.......++... .+. +..++....-.. ...... ...+ ....++ . -+-+.+.+|
T Consensus 186 r~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~--qEm~eV----~~~d-~e~~ee------n--~d~l~Fyyg 250 (301)
T KOG3975|consen 186 RFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAA--QEMEEV----TTRD-IEYCEE------N--LDSLWFYYG 250 (301)
T ss_pred HHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhch--HHHHHH----HHhH-HHHHHh------c--CcEEEEEcc
Confidence 1111111111111111100 000 001111000000 000000 0000 000111 0 256899999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCcEEE-ecCCCCCCCccChHHHHHHHHHHhc
Q 018930 297 LDDRALSPDVQEKLVRENPPEGVYK-IKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 297 ~~D~~vp~~~~~~~~~~~~~~~~~~-i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
..|.++|.+....+.+.+|..++.. .++..|.+...+.+..++.+.+.++
T Consensus 251 t~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 251 TNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred CCCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhhC
Confidence 9999999999999999998766554 3688999999999999988887654
No 126
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.12 E-value=9.2e-09 Score=94.39 Aligned_cols=105 Identities=13% Similarity=0.137 Sum_probs=74.0
Q ss_pred CCCceEEEecCCCCCcccHHHHHH------------------HHHhCCCeEEEeCCC-CCCCCCCCC-CCCCChHhhhHH
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVA------------------SLEEVGLIPTALDLK-GSGIDLSDT-NSVTTLAEYSKP 152 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~------------------~L~~~G~~vi~~D~~-G~G~S~~~~-~~~~~~~~~~~~ 152 (348)
.+.|.||+++|.++.+..+..+.+ .+.+ -..++.+|.| |+|.|.... ....+.++.++|
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 347899999999998876533321 1222 2689999976 899885422 223456788888
Q ss_pred HHHHHHhh-------cCCCcEEEEEECHHHHHHHHHHHhC----------CcccceEEEecccc
Q 018930 153 LLDYLENL-------LEDEKVILVGHSSGGACVSYALEHF----------PQKISKAIFLCATM 199 (348)
Q Consensus 153 l~~~l~~l-------~~~~~v~lvGhS~Gg~~a~~~a~~~----------p~~v~~lvl~~~~~ 199 (348)
+.++++.+ .. .+++|+|||+||.++..+|... .-.++++++-++..
T Consensus 154 ~~~~l~~f~~~~p~~~~-~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRA-NDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHhCccccC-CCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 88888753 23 4999999999999888777652 11367888877754
No 127
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.02 E-value=9.5e-09 Score=90.33 Aligned_cols=105 Identities=11% Similarity=0.059 Sum_probs=68.4
Q ss_pred CCceEEEecCCCCCcc---cH-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh---hcC-CCc
Q 018930 94 QYKKFVLIHGEGFGAW---CW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN---LLE-DEK 165 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~---~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~---l~~-~~~ 165 (348)
..|+||++||.+.-.. .. ..+...+...|+.|+.+|+|---+-. ....+++..+.+..+.++ ++. .++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~----~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP----FPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC----CCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 4789999999874433 34 34455566679999999998544321 122344433333333333 333 248
Q ss_pred EEEEEECHHHHHHHHHHHhCCc----ccceEEEecccccCC
Q 018930 166 VILVGHSSGGACVSYALEHFPQ----KISKAIFLCATMVSD 202 (348)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~ 202 (348)
+.++|+|-||.+++.++..-.+ .....+++.|.....
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 9999999999999998875433 467888888865443
No 128
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.98 E-value=4.4e-09 Score=82.98 Aligned_cols=173 Identities=13% Similarity=0.147 Sum_probs=112.3
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCC-----------------CCCCCCCChHhhhHHHHHHHH
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDL-----------------SDTNSVTTLAEYSKPLLDYLE 158 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~-----------------~~~~~~~~~~~~~~~l~~~l~ 158 (348)
.+||++||.+.+...|..+++.|.-.+...|.+.-|-.-.+. .-.....++...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 479999999999999998888877666777776433221110 001123355566667777776
Q ss_pred hh---cC-CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCC
Q 018930 159 NL---LE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKD 234 (348)
Q Consensus 159 ~l---~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (348)
+. ++ .+++.+-|.|+||.++++.+..+|..+.+++-..+..+....
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~------------------------------ 133 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI------------------------------ 133 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh------------------------------
Confidence 64 22 147899999999999999999998888887766654321100
Q ss_pred CCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHh-
Q 018930 235 KPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRE- 313 (348)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~- 313 (348)
.+..+... . . ..|++..||+.|.+||....+...+.
T Consensus 134 -----------~~~~~~~~----------------~------~----------~~~i~~~Hg~~d~~vp~~~g~~s~~~l 170 (206)
T KOG2112|consen 134 -----------GLPGWLPG----------------V------N----------YTPILLCHGTADPLVPFRFGEKSAQFL 170 (206)
T ss_pred -----------hccCCccc----------------c------C----------cchhheecccCCceeehHHHHHHHHHH
Confidence 00000000 0 0 17999999999999998875544433
Q ss_pred ---CCCCcEEEecCCCCCCCccChHHHHHHH
Q 018930 314 ---NPPEGVYKIKGSDHCPFFSKPQSLHKIL 341 (348)
Q Consensus 314 ---~~~~~~~~i~~~gH~~~~e~p~~~~~~i 341 (348)
....++..++|.+|...-+.-+++...|
T Consensus 171 ~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~ 201 (206)
T KOG2112|consen 171 KSLGVRVTFKPYPGLGHSTSPQELDDLKSWI 201 (206)
T ss_pred HHcCCceeeeecCCccccccHHHHHHHHHHH
Confidence 3346788899999987544444444333
No 129
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.98 E-value=1.9e-08 Score=80.02 Aligned_cols=163 Identities=13% Similarity=0.132 Sum_probs=104.7
Q ss_pred eeecCCC-CceEEEecCCCCCcc-cHHHHHHHHHhCCCeEEEeCCC-CCCCCCC-CCC------CCCChH---hhhHHHH
Q 018930 88 NILENIQ-YKKFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLK-GSGIDLS-DTN------SVTTLA---EYSKPLL 154 (348)
Q Consensus 88 ~~~~~~~-~~~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~-G~G~S~~-~~~------~~~~~~---~~~~~l~ 154 (348)
|..+..+ +..||++--+.+... .-+..++.++..||.|+++|+- |--.|.. +.. ...+.. .....+.
T Consensus 31 Yv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~ 110 (242)
T KOG3043|consen 31 YVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVV 110 (242)
T ss_pred EEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHH
Confidence 3334333 346777766655554 4778899999999999999964 4222211 000 111222 2333444
Q ss_pred HHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCC
Q 018930 155 DYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKD 234 (348)
Q Consensus 155 ~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (348)
++|+..+...++.++|.+|||.++..+....| .+.+.+.+-|......
T Consensus 111 k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~~------------------------------- 158 (242)
T KOG3043|consen 111 KWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDSA------------------------------- 158 (242)
T ss_pred HHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCChh-------------------------------
Confidence 45555564459999999999999988887766 5776666554321100
Q ss_pred CCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC
Q 018930 235 KPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN 314 (348)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~ 314 (348)
....+ ++|++++.|+.|..+|++....+.+.+
T Consensus 159 ----------------------------------------D~~~v--------k~Pilfl~ae~D~~~p~~~v~~~ee~l 190 (242)
T KOG3043|consen 159 ----------------------------------------DIANV--------KAPILFLFAELDEDVPPKDVKAWEEKL 190 (242)
T ss_pred ----------------------------------------HHhcC--------CCCEEEEeecccccCCHHHHHHHHHHH
Confidence 00011 389999999999999998877666655
Q ss_pred ---CC--CcEEEecCCCCCCC
Q 018930 315 ---PP--EGVYKIKGSDHCPF 330 (348)
Q Consensus 315 ---~~--~~~~~i~~~gH~~~ 330 (348)
+. .++.+++|-+|-..
T Consensus 191 k~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 191 KENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred hcCcccceeEEEcCCccchhh
Confidence 32 36899999999866
No 130
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.98 E-value=2.4e-09 Score=87.06 Aligned_cols=107 Identities=20% Similarity=0.165 Sum_probs=76.4
Q ss_pred CCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh-------cCCC
Q 018930 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL-------LEDE 164 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-------~~~~ 164 (348)
.+.-|.|+|+||+.-....|..++.+++..||-|+++++-..- ......+..+....++++..-+.++ ++.
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~-~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~- 120 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF-PPDGQDEIKSAASVINWLPEGLQHVLPENVEANLS- 120 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc-CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccc-
Confidence 5667999999999999999999999999999999999987521 1111111122333333333333332 233
Q ss_pred cEEEEEECHHHHHHHHHHHhCC--cccceEEEeccccc
Q 018930 165 KVILVGHSSGGACVSYALEHFP--QKISKAIFLCATMV 200 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~ 200 (348)
++.|+|||.||-.|..+|..+. -++++||-++|...
T Consensus 121 klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 121 KLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred eEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 8999999999999999998764 24788888888643
No 131
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.97 E-value=2.4e-09 Score=96.76 Aligned_cols=95 Identities=20% Similarity=0.227 Sum_probs=70.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCC-CCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHh
Q 018930 106 FGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNS-VTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 106 ~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
.....|..+++.|.+.||.+ ..|++|+|.+...... ...++++.+.++++.+..+.. +++|+||||||.+++.++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~-kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGK-KVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCC-CEEEEEECHhHHHHHHHHHH
Confidence 45678999999999998755 8999999988553221 112344444444444455555 99999999999999999988
Q ss_pred CCcc----cceEEEecccccCC
Q 018930 185 FPQK----ISKAIFLCATMVSD 202 (348)
Q Consensus 185 ~p~~----v~~lvl~~~~~~~~ 202 (348)
+|+. |+++|.++++....
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCC
Confidence 8864 78999998876544
No 132
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.96 E-value=3.7e-09 Score=90.96 Aligned_cols=92 Identities=23% Similarity=0.154 Sum_probs=64.4
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCC--CCCCCCCCCC--CC---hHhhhHHHHHHHHh---h---
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS--GIDLSDTNSV--TT---LAEYSKPLLDYLEN---L--- 160 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~--G~S~~~~~~~--~~---~~~~~~~l~~~l~~---l--- 160 (348)
.-|.||+-||.|.....|..+.+.|++.||-|.++|+||. |..+...... +. +.+-..|+..+|+. +
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 4688999999999999999999999999999999999994 3332111110 11 11222233222222 2
Q ss_pred -------cCCCcEEEEEECHHHHHHHHHHHhCC
Q 018930 161 -------LEDEKVILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 161 -------~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (348)
.. .+|.++|||+||+.++..+....
T Consensus 150 P~l~~~ld~-~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 150 PALAGRLDP-QRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred cccccccCc-cceEEEecccccHHHHHhccccc
Confidence 23 48999999999999999986544
No 133
>PRK04940 hypothetical protein; Provisional
Probab=98.95 E-value=2.1e-07 Score=72.96 Aligned_cols=171 Identities=11% Similarity=0.100 Sum_probs=97.8
Q ss_pred EEEecCCCCCccc--HHHH-HHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh---cCCCcEEEEEE
Q 018930 98 FVLIHGEGFGAWC--WYKT-VASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVILVGH 171 (348)
Q Consensus 98 vvllHG~~~~~~~--~~~~-~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGh 171 (348)
|+++||+.+++.. .... ...+ .-+.+++ +++ ..+..+..+.+.+.+..+ +..+++.|||+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7899999999988 5322 1122 1123333 221 123344444455555432 11137999999
Q ss_pred CHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhh
Q 018930 172 SSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLY 251 (348)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (348)
|+||+.|..+|.++. + ..|+++|+..+. ..+........ . ...+....+.++
T Consensus 68 SLGGyyA~~La~~~g--~-~aVLiNPAv~P~-----~~L~~~ig~~~------------------~-y~~~~~~h~~eL- 119 (180)
T PRK04940 68 GLGGYWAERIGFLCG--I-RQVIFNPNLFPE-----ENMEGKIDRPE------------------E-YADIATKCVTNF- 119 (180)
T ss_pred ChHHHHHHHHHHHHC--C-CEEEECCCCChH-----HHHHHHhCCCc------------------c-hhhhhHHHHHHh-
Confidence 999999999999875 4 567789976531 11111111000 0 001111111111
Q ss_pred ccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCCCC-cEEEecCCCCCCC
Q 018930 252 FNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENPPE-GVYKIKGSDHCPF 330 (348)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~-~~~~i~~~gH~~~ 330 (348)
+ +.. .-..+++..+.|.+.....+.... .++ ++.+.+|++|-+
T Consensus 120 ----------------~----------~~~------p~r~~vllq~gDEvLDyr~a~~~y---~~~y~~~v~~GGdH~f- 163 (180)
T PRK04940 120 ----------------R----------EKN------RDRCLVILSRNDEVLDSQRTAEEL---HPYYEIVWDEEQTHKF- 163 (180)
T ss_pred ----------------h----------hcC------cccEEEEEeCCCcccCHHHHHHHh---ccCceEEEECCCCCCC-
Confidence 0 000 135699999999999877654433 445 688888888875
Q ss_pred ccChHHHHHHHHHHhcC
Q 018930 331 FSKPQSLHKILVEIAQI 347 (348)
Q Consensus 331 ~e~p~~~~~~i~~fl~~ 347 (348)
++-++....|.+|++.
T Consensus 164 -~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 164 -KNISPHLQRIKAFKTL 179 (180)
T ss_pred -CCHHHHHHHHHHHHhc
Confidence 3556677888888753
No 134
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.92 E-value=2.7e-08 Score=96.33 Aligned_cols=199 Identities=15% Similarity=0.158 Sum_probs=123.4
Q ss_pred CCceEEEecCCCCCcc-------cHHHHHHHHHhCCCeEEEeCCCCCCCCCCC-------CCCCCChHhhhHHHHHHHHh
Q 018930 94 QYKKFVLIHGEGFGAW-------CWYKTVASLEEVGLIPTALDLKGSGIDLSD-------TNSVTTLAEYSKPLLDYLEN 159 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~-------~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~ 159 (348)
+-|.||.+||.+++.. .|..+ .....|+.|+.+|.||.|..... .-+...++|....+..+++.
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~ 602 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKL 602 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhc
Confidence 4578888899887333 34444 46667999999999998865321 12445677777777777776
Q ss_pred hcCC-CcEEEEEECHHHHHHHHHHHhCCcccceE-EEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCC
Q 018930 160 LLED-EKVILVGHSSGGACVSYALEHFPQKISKA-IFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPP 237 (348)
Q Consensus 160 l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~l-vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (348)
.-++ +++.++|+|+||++++.++...|+.+.++ +.++|.....- .-....+. +
T Consensus 603 ~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~--yds~~ter------y----------------- 657 (755)
T KOG2100|consen 603 PFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLY--YDSTYTER------Y----------------- 657 (755)
T ss_pred ccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeee--ecccccHh------h-----------------
Confidence 5443 48999999999999999999988565555 88888643210 00000000 0
Q ss_pred CchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcc-eEEEEeCCCCCCCHHHHHHHHHhCC-
Q 018930 238 TGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGR-RFFIQTLDDRALSPDVQEKLVRENP- 315 (348)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-vl~i~G~~D~~vp~~~~~~~~~~~~- 315 (348)
.......... .. ..........+. .| .|+|||+.|.-|+.+....+.+.+.
T Consensus 658 --------------mg~p~~~~~~--y~---e~~~~~~~~~~~--------~~~~LliHGt~DdnVh~q~s~~~~~aL~~ 710 (755)
T KOG2100|consen 658 --------------MGLPSENDKG--YE---ESSVSSPANNIK--------TPKLLLIHGTEDDNVHFQQSAILIKALQN 710 (755)
T ss_pred --------------cCCCccccch--hh---hccccchhhhhc--------cCCEEEEEcCCcCCcCHHHHHHHHHHHHH
Confidence 0000000000 00 011111112222 34 5999999999999887777776552
Q ss_pred ---CCcEEEecCCCCCCCccCh-HHHHHHHHHHhc
Q 018930 316 ---PEGVYKIKGSDHCPFFSKP-QSLHKILVEIAQ 346 (348)
Q Consensus 316 ---~~~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~ 346 (348)
..++.++|+.+|.+..-.. ..+...+..|+.
T Consensus 711 ~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 711 AGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred CCCceEEEEeCCCCcccccccchHHHHHHHHHHHH
Confidence 2688999999999876443 455666666654
No 135
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.90 E-value=9e-08 Score=78.78 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=73.1
Q ss_pred EecCCC--CCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHH
Q 018930 100 LIHGEG--FGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC 177 (348)
Q Consensus 100 llHG~~--~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 177 (348)
++|+.+ ++...|..+...|.. .+.|+++|++|+|.+... ..+++++++.+...+.......+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPL---PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCC---CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 455544 566789999999987 499999999999865432 24677777766665555433348999999999999
Q ss_pred HHHHHHh---CCcccceEEEeccccc
Q 018930 178 VSYALEH---FPQKISKAIFLCATMV 200 (348)
Q Consensus 178 a~~~a~~---~p~~v~~lvl~~~~~~ 200 (348)
+..++.+ .+..+.+++++++...
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPP 103 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCC
Confidence 9888875 4567899998887543
No 136
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.87 E-value=2.9e-09 Score=86.99 Aligned_cols=87 Identities=26% Similarity=0.339 Sum_probs=52.8
Q ss_pred ceEEEecCCCC-CcccHHHHHHHHHhCCCe---EEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh----hcCCCcEE
Q 018930 96 KKFVLIHGEGF-GAWCWYKTVASLEEVGLI---PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN----LLEDEKVI 167 (348)
Q Consensus 96 ~~vvllHG~~~-~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~----l~~~~~v~ 167 (348)
.||||+||.++ ....|..+.+.|.++||. |+++++-....... ........+.+..|.++++. -+. +|-
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~-~~~~~~~~~~~~~l~~fI~~Vl~~TGa--kVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPS-VQNAHMSCESAKQLRAFIDAVLAYTGA--KVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTH-HHHHHB-HHHHHHHHHHHHHHHHHHT----EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCc-ccccccchhhHHHHHHHHHHHHHhhCC--EEE
Confidence 48999999999 567999999999999999 79999844332111 01111122334555555554 443 999
Q ss_pred EEEECHHHHHHHHHHHhC
Q 018930 168 LVGHSSGGACVSYALEHF 185 (348)
Q Consensus 168 lvGhS~Gg~~a~~~a~~~ 185 (348)
||||||||.++..+....
T Consensus 79 IVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEETCHHHHHHHHHHHC
T ss_pred EEEcCCcCHHHHHHHHHc
Confidence 999999999999998753
No 137
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.84 E-value=1.3e-06 Score=76.02 Aligned_cols=121 Identities=16% Similarity=0.135 Sum_probs=79.4
Q ss_pred eecccCCeeeeeeec----C-CCCceEEEecCCCCCcc-----cHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCC
Q 018930 77 SESLSNGKQDTNILE----N-IQYKKFVLIHGEGFGAW-----CWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTT 145 (348)
Q Consensus 77 ~~~~~~g~~~~~~~~----~-~~~~~vvllHG~~~~~~-----~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~ 145 (348)
.+...++..+.+|.. . ...|.||++||.|.-.. .|..+...++. .+.-|+++|+|=--+... ...
T Consensus 67 ~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~----Pa~ 142 (336)
T KOG1515|consen 67 TIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPF----PAA 142 (336)
T ss_pred EecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCC----Ccc
Confidence 333344444544442 2 34679999999875433 57777777744 478899999984433322 234
Q ss_pred hHhhhHHHHHHHHh------hcCCCcEEEEEECHHHHHHHHHHHhC------CcccceEEEecccccCC
Q 018930 146 LAEYSKPLLDYLEN------LLEDEKVILVGHSSGGACVSYALEHF------PQKISKAIFLCATMVSD 202 (348)
Q Consensus 146 ~~~~~~~l~~~l~~------l~~~~~v~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~ 202 (348)
++|-.+.+..++++ .+.+ +++|+|-|-||.+|..+|.+. +-++++.|++-|.....
T Consensus 143 y~D~~~Al~w~~~~~~~~~~~D~~-rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLKLGADPS-RVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred chHHHHHHHHHHHhHHHHhCCCcc-cEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 55555555555543 2344 899999999999998887642 35789999999976544
No 138
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.81 E-value=4.8e-09 Score=91.73 Aligned_cols=109 Identities=19% Similarity=0.216 Sum_probs=66.1
Q ss_pred CCCCceEEEecCCCCCc--ccHH-HHHHHH-Hh--CCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh----c
Q 018930 92 NIQYKKFVLIHGEGFGA--WCWY-KTVASL-EE--VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----L 161 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~--~~~~-~~~~~L-~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~ 161 (348)
+.+.|++|++|||.++. ..|. .+.+.| .. .+++||++||...-.. .-...........+.|..+|..| +
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~-~Y~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN-NYPQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc-cccchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 46789999999999888 3565 445544 43 4799999999632211 00001112333444445545443 2
Q ss_pred C-CCcEEEEEECHHHHHHHHHHHhCCc--ccceEEEecccccC
Q 018930 162 E-DEKVILVGHSSGGACVSYALEHFPQ--KISKAIFLCATMVS 201 (348)
Q Consensus 162 ~-~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 201 (348)
. .++++|||||+||.+|-.++..... +|..++.++|+.+.
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 2 1499999999999999999998877 89999999998653
No 139
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.79 E-value=7e-08 Score=80.40 Aligned_cols=176 Identities=21% Similarity=0.244 Sum_probs=112.9
Q ss_pred CCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCC------CCCCCC--------------C-------
Q 018930 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDL------SDTNSV--------------T------- 144 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~------~~~~~~--------------~------- 144 (348)
+.+-|.|||-||++++...|..+.-.|+.+||-|.++++|-+-.+- .+.+.. .
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 3456899999999999999999999999999999999998765431 100100 0
Q ss_pred -ChHhhhHHHH---HHHHhhcC-----------------------CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecc
Q 018930 145 -TLAEYSKPLL---DYLENLLE-----------------------DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (348)
Q Consensus 145 -~~~~~~~~l~---~~l~~l~~-----------------------~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (348)
-+..-+.... .+|+.++. ..++.++|||+||+.++.....+ ..+++.|++++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeee
Confidence 0111112221 22222110 14789999999999988777654 56999999998
Q ss_pred cccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccc
Q 018930 198 TMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIME 277 (348)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (348)
.+.+-... ..+
T Consensus 274 WM~Pl~~~---------------------------------------------------------------------~~~ 284 (399)
T KOG3847|consen 274 WMFPLDQL---------------------------------------------------------------------QYS 284 (399)
T ss_pred eecccchh---------------------------------------------------------------------hhh
Confidence 65431100 000
Q ss_pred cccCCcCccCCcceEEEEeCCCCCCCHH--HHHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 278 KLSLSPEKYGTGRRFFIQTLDDRALSPD--VQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 278 ~~~~~~~~~~~~Pvl~i~G~~D~~vp~~--~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
.. +.|+++|. .+|...+.. ..++.........++++.|+=|..+-+-|=.+-+.|..+++
T Consensus 285 ~a--------rqP~~fin-v~~fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~ 346 (399)
T KOG3847|consen 285 QA--------RQPTLFIN-VEDFQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFK 346 (399)
T ss_pred hc--------cCCeEEEE-cccccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhc
Confidence 11 27999998 444444433 33444444455688889999999888877777676666654
No 140
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.78 E-value=1.3e-07 Score=82.11 Aligned_cols=124 Identities=16% Similarity=0.150 Sum_probs=65.9
Q ss_pred ceeeeecccCCeeeeee--ec---CCCCceEEEecCCCCCccc--------------H----HHHHHHHHhCCCeEEEeC
Q 018930 73 RRTLSESLSNGKQDTNI--LE---NIQYKKFVLIHGEGFGAWC--------------W----YKTVASLEEVGLIPTALD 129 (348)
Q Consensus 73 ~~~~~~~~~~g~~~~~~--~~---~~~~~~vvllHG~~~~~~~--------------~----~~~~~~L~~~G~~vi~~D 129 (348)
.+++..-...+..+..+ .. .+..|.||++||-+++.+. + ..+...|+++||-|+++|
T Consensus 88 ~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D 167 (390)
T PF12715_consen 88 REKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPD 167 (390)
T ss_dssp EEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE-
T ss_pred EEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEc
Confidence 34444444445444422 22 2346799999998876642 1 125678999999999999
Q ss_pred CCCCCCCCCCCC----CCCChHhhhH---------------HHHHHHHhhcC-----CCcEEEEEECHHHHHHHHHHHhC
Q 018930 130 LKGSGIDLSDTN----SVTTLAEYSK---------------PLLDYLENLLE-----DEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 130 ~~G~G~S~~~~~----~~~~~~~~~~---------------~l~~~l~~l~~-----~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
.+|+|+...... ..++...++. +....++.|.. .++|.++|+||||..++.+|+.
T Consensus 168 ~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL- 246 (390)
T PF12715_consen 168 ALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL- 246 (390)
T ss_dssp -TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-
T ss_pred cccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc-
Confidence 999998743221 1112122211 11222333321 2489999999999999999986
Q ss_pred CcccceEEEecc
Q 018930 186 PQKISKAIFLCA 197 (348)
Q Consensus 186 p~~v~~lvl~~~ 197 (348)
.++|+..|..+.
T Consensus 247 DdRIka~v~~~~ 258 (390)
T PF12715_consen 247 DDRIKATVANGY 258 (390)
T ss_dssp -TT--EEEEES-
T ss_pred chhhHhHhhhhh
Confidence 468988776554
No 141
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.75 E-value=2e-08 Score=82.70 Aligned_cols=51 Identities=24% Similarity=0.419 Sum_probs=38.5
Q ss_pred hhHHHHHHHHhhc-C-CCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 149 YSKPLLDYLENLL-E-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 149 ~~~~l~~~l~~l~-~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
+.+...++|.... . .++|.|+|.|.||-+|+.+|..+| .|+++|.+++...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 4455556665542 2 149999999999999999999998 7999999998654
No 142
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.75 E-value=1.1e-07 Score=86.34 Aligned_cols=204 Identities=17% Similarity=0.142 Sum_probs=126.8
Q ss_pred CCceEEEecCCCCCccc-----HHH--HHHHHHhCCCeEEEeCCCCCCCCCC-------CCCCCCChHhhhHHHHHHHHh
Q 018930 94 QYKKFVLIHGEGFGAWC-----WYK--TVASLEEVGLIPTALDLKGSGIDLS-------DTNSVTTLAEYSKPLLDYLEN 159 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~-----~~~--~~~~L~~~G~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~~l~~~l~~ 159 (348)
+-|+++++-|.++-.-. |.. -...|+..||-|+.+|-||.-.-.. ..-+...++|.++-+.-+.++
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq 720 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQ 720 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHh
Confidence 46799999998764432 222 2346888899999999999654321 223556789999999999988
Q ss_pred hc---CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCC
Q 018930 160 LL---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKP 236 (348)
Q Consensus 160 l~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (348)
.+ .+ +|.+-|||+||++++....++|+.++..|.=+|...... .. ....++.+....
T Consensus 721 ~gfidmd-rV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~------YD--TgYTERYMg~P~----------- 780 (867)
T KOG2281|consen 721 TGFIDMD-RVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRL------YD--TGYTERYMGYPD----------- 780 (867)
T ss_pred cCcccch-heeEeccccccHHHHHHhhcCcceeeEEeccCcceeeee------ec--ccchhhhcCCCc-----------
Confidence 75 45 999999999999999999999997776664443221110 00 000000000000
Q ss_pred CCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHh---
Q 018930 237 PTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRE--- 313 (348)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~--- 313 (348)
.....+.. .......+++... .-..+++||--|.-|...+...+...
T Consensus 781 ------------------~nE~gY~a-------gSV~~~Veklpde-----pnRLlLvHGliDENVHF~Hts~Lvs~lvk 830 (867)
T KOG2281|consen 781 ------------------NNEHGYGA-------GSVAGHVEKLPDE-----PNRLLLVHGLIDENVHFAHTSRLVSALVK 830 (867)
T ss_pred ------------------cchhcccc-------hhHHHHHhhCCCC-----CceEEEEecccccchhhhhHHHHHHHHHh
Confidence 00000000 0000111111100 13589999999999987776555544
Q ss_pred -CCCCcEEEecCCCCCCCc-cChHHHHHHHHHHhcC
Q 018930 314 -NPPEGVYKIKGSDHCPFF-SKPQSLHKILVEIAQI 347 (348)
Q Consensus 314 -~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 347 (348)
.+.-+++++|+-.|.+-. |.-.-+...|..|+++
T Consensus 831 agKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 831 AGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 355699999999999764 3445566778888875
No 143
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.70 E-value=1.3e-07 Score=78.88 Aligned_cols=107 Identities=16% Similarity=0.186 Sum_probs=69.0
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHH-hCCC--eEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh----cCCCc
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLE-EVGL--IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LEDEK 165 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~-~~G~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 165 (348)
.++..+|||||+..+.+.-..-+..+. ..++ .++.|.||..|.-..-.....+...-...+.++|+.+ +. .+
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~-~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI-KR 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC-ce
Confidence 457799999999988665332222222 2223 7999999988853211111223444455566666654 34 49
Q ss_pred EEEEEECHHHHHHHHHHHh----CC-----cccceEEEeccccc
Q 018930 166 VILVGHSSGGACVSYALEH----FP-----QKISKAIFLCATMV 200 (348)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~~----~p-----~~v~~lvl~~~~~~ 200 (348)
|+|++||||+.+.+.+... .+ .++..+|+++|-..
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999999888654 11 35778888887543
No 144
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.69 E-value=8.4e-07 Score=70.45 Aligned_cols=102 Identities=25% Similarity=0.214 Sum_probs=77.0
Q ss_pred CceEEEecCCCCCccc---HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC---CcEEE
Q 018930 95 YKKFVLIHGEGFGAWC---WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED---EKVIL 168 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~---~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~---~~v~l 168 (348)
...|||+.|++.+--. -..+...|.+.++.++-+-++. +....+..++.+.++|+..+++++... ++|+|
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~S----sy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRS----SYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccc----cccccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 4579999999877653 4567888888899999988762 222234458899999999999987643 38999
Q ss_pred EEECHHHHHHHHHHH--hCCcccceEEEeccccc
Q 018930 169 VGHSSGGACVSYALE--HFPQKISKAIFLCATMV 200 (348)
Q Consensus 169 vGhS~Gg~~a~~~a~--~~p~~v~~lvl~~~~~~ 200 (348)
+|||.|+.=.++|.. ..+..|...|+.+|...
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999999998887773 23556777787777654
No 145
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.69 E-value=2.3e-06 Score=72.25 Aligned_cols=220 Identities=14% Similarity=0.103 Sum_probs=118.9
Q ss_pred eEEEecCCCCCcc-cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCC--cEEEEEECH
Q 018930 97 KFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDE--KVILVGHSS 173 (348)
Q Consensus 97 ~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~--~v~lvGhS~ 173 (348)
|+|+|=||.+... ...+..+...+.|++++.+-.+-...... ...+...++.+.+.+......+ ++++-..|.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWP----SKRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeee----ccchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 4677778875554 55667776666899999988653322111 1356666666666666654332 799999999
Q ss_pred HHHHHHHHHHh---------C-CcccceEEEecccccCCCCChhhHHHHhhcchhh-hhhhhhhhhhcCCCCCCCCchhh
Q 018930 174 GGACVSYALEH---------F-PQKISKAIFLCATMVSDGQRPFDVFAEELGSAER-FMQESQFLIYGNGKDKPPTGFMF 242 (348)
Q Consensus 174 Gg~~a~~~a~~---------~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 242 (348)
||...+..... . -.+++++|+=+++...........+......... +......... ..+
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 146 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQ----------FLL 146 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHH----------HHH
Confidence 88866555431 1 1237888866555433322222222222221100 0000000000 000
Q ss_pred HHHhhhhhh-ccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC----CC
Q 018930 243 EKQQMKGLY-FNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP----PE 317 (348)
Q Consensus 243 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~----~~ 317 (348)
......... ................. .....+|.|+|+++.|.+++.+..++.++... ++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V 211 (240)
T PF05705_consen 147 RLSIISYFIFGYPDVQEYYRRALNDFA---------------NSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDV 211 (240)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHhhhh---------------cCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeE
Confidence 000000000 00000011111100000 00113799999999999999988777665542 35
Q ss_pred cEEEecCCCCCCCc-cChHHHHHHHHHHh
Q 018930 318 GVYKIKGSDHCPFF-SKPQSLHKILVEIA 345 (348)
Q Consensus 318 ~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 345 (348)
+...++++.|..|+ ++|+++.+.+.+|+
T Consensus 212 ~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 212 RAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred EEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 67778999999887 68999999999885
No 146
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.65 E-value=2.4e-07 Score=76.81 Aligned_cols=99 Identities=20% Similarity=0.245 Sum_probs=61.9
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCC---C----CC----CCCCCCCChHhhhHHHH-HHHHhhcCC
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSG---I----DL----SDTNSVTTLAEYSKPLL-DYLENLLED 163 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G---~----S~----~~~~~~~~~~~~~~~l~-~~l~~l~~~ 163 (348)
|.|||+||.|..+..-.... .. |...|+.+.|-.+ . +. .+.....-+....+.+. .+.++.+++
T Consensus 192 PLvlfLHgagq~g~dn~~~l---~s-g~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID 267 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVL---SS-GIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNID 267 (387)
T ss_pred cEEEEEecCCCCCchhhhhh---hc-CccceeeecccCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcc
Confidence 89999999998887644322 22 3344444444333 0 10 00111112223333333 233444543
Q ss_pred -CcEEEEEECHHHHHHHHHHHhCCcccceEEEeccc
Q 018930 164 -EKVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (348)
Q Consensus 164 -~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (348)
.+|+++|.|+||+.++.++.++|+.+.+.+++++.
T Consensus 268 ~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 268 RSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred cceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 58999999999999999999999999999999874
No 147
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.65 E-value=7.5e-06 Score=73.51 Aligned_cols=79 Identities=16% Similarity=0.219 Sum_probs=60.9
Q ss_pred HHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc---CC-CcEEEEEECHHHHHHHHHHHhCCccc
Q 018930 114 TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL---ED-EKVILVGHSSGGACVSYALEHFPQKI 189 (348)
Q Consensus 114 ~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~---~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v 189 (348)
+-..|.. |+.|+.+.+. ..+....++++.......+++... .+ .+++|+|.|.||+.++.+|+.+|+.+
T Consensus 93 vG~AL~~-GHPvYFV~F~------p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 93 VGVALRA-GHPVYFVGFF------PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHc-CCCeEEEEec------CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 3445555 9999988765 223344589998888888887753 21 28999999999999999999999999
Q ss_pred ceEEEecccc
Q 018930 190 SKAIFLCATM 199 (348)
Q Consensus 190 ~~lvl~~~~~ 199 (348)
.-+|+-+++.
T Consensus 166 gplvlaGaPl 175 (581)
T PF11339_consen 166 GPLVLAGAPL 175 (581)
T ss_pred CceeecCCCc
Confidence 9988877664
No 148
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.61 E-value=7.2e-06 Score=75.21 Aligned_cols=107 Identities=13% Similarity=0.105 Sum_probs=70.1
Q ss_pred CCCceEEEecCCCCCcccHHHHHH-------------------HHHhCCCeEEEeCCC-CCCCCCCCCC--CCCChHhhh
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVA-------------------SLEEVGLIPTALDLK-GSGIDLSDTN--SVTTLAEYS 150 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~-------------------~L~~~G~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~ 150 (348)
...|.||.+.|.++++..|..+.+ .+.+ -.+++.+|.| |.|.|..... ...+.++.+
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceEEEeecCceEEeeccccccccchhhHHH
Confidence 457899999999999998855432 1122 2689999966 9999954332 245788888
Q ss_pred HHHHHHHHhhc------CCCcEEEEEECHHHHHHHHHHHh----C------CcccceEEEeccccc
Q 018930 151 KPLLDYLENLL------EDEKVILVGHSSGGACVSYALEH----F------PQKISKAIFLCATMV 200 (348)
Q Consensus 151 ~~l~~~l~~l~------~~~~v~lvGhS~Gg~~a~~~a~~----~------p~~v~~lvl~~~~~~ 200 (348)
+++.++|..+- ...+++|.|.|+||..+..+|.. . +-.++++++.++...
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccc
Confidence 88888887741 12399999999999977666643 2 234789998887653
No 149
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.60 E-value=8.4e-07 Score=76.65 Aligned_cols=58 Identities=16% Similarity=0.084 Sum_probs=41.3
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHhC-----CCCcEEEecCCCCCCCc-cChHHHHHHHHHHh
Q 018930 288 TGRRFFIQTLDDRALSPDVQEKLVREN-----PPEGVYKIKGSDHCPFF-SKPQSLHKILVEIA 345 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 345 (348)
++|+++.+|..|.++|....+.+.+.+ .+++++.+++.+|.... ..-....+.|.+-+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRF 282 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHH
Confidence 689999999999999998876666543 35677888899998532 23334445555443
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.59 E-value=3.6e-06 Score=68.46 Aligned_cols=104 Identities=25% Similarity=0.263 Sum_probs=74.2
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCC-----CeEEEeCCCCC----CCCCCC----------CCCCCChHhhhHHHHHH
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVG-----LIPTALDLKGS----GIDLSD----------TNSVTTLAEYSKPLLDY 156 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G-----~~vi~~D~~G~----G~S~~~----------~~~~~~~~~~~~~l~~~ 156 (348)
-|.|||||++++.......+..|...+ -=++.+|--|. |.=+.+ .....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 378999999999999999999888763 12455665552 111111 01234666777777777
Q ss_pred HHhh----cCCCcEEEEEECHHHHHHHHHHHhCCc-----ccceEEEeccccc
Q 018930 157 LENL----LEDEKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCATMV 200 (348)
Q Consensus 157 l~~l----~~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 200 (348)
+..| +++ ++.+|||||||.-...|+..+.+ .+.++|.++++..
T Consensus 126 msyL~~~Y~i~-k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIP-KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCc-eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 7665 566 99999999999998888876532 3889999988654
No 151
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.56 E-value=2e-07 Score=82.16 Aligned_cols=102 Identities=23% Similarity=0.261 Sum_probs=82.0
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCe---EEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLI---PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
-++|++||++.+...|..+...+...|+. ++.+++++.. .........++....+.+.+...+.. ++.|+|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~ql~~~V~~~l~~~ga~-~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD---GTYSLAVRGEQLFAYVDEVLAKTGAK-KVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC---CCccccccHHHHHHHHHHHHhhcCCC-ceEEEeec
Confidence 48999999988889999888888877777 9999988662 12233345666667777777777776 99999999
Q ss_pred HHHHHHHHHHHhCC--cccceEEEecccccC
Q 018930 173 SGGACVSYALEHFP--QKISKAIFLCATMVS 201 (348)
Q Consensus 173 ~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~ 201 (348)
+||.++..++..++ .+|+.++.++++-..
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999999888 899999999987543
No 152
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.56 E-value=3.2e-07 Score=77.55 Aligned_cols=101 Identities=17% Similarity=0.143 Sum_probs=71.4
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC-CcEEEEEECH
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED-EKVILVGHSS 173 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~v~lvGhS~ 173 (348)
...|||+-|..+--+. .++..=.+.||.|+.+++||++.|...+....+....-..+.-.|..|+.. +.++|.|||.
T Consensus 243 q~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSI 320 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSI 320 (517)
T ss_pred ceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeec
Confidence 4477888886554432 122222234899999999999999765554444444444444556667643 5899999999
Q ss_pred HHHHHHHHHHhCCcccceEEEeccc
Q 018930 174 GGACVSYALEHFPQKISKAIFLCAT 198 (348)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (348)
||..+..+|..||+ |+++|+-+++
T Consensus 321 GGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 321 GGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred CCchHHHHhhcCCC-ceEEEeecch
Confidence 99999999999997 9998876654
No 153
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.54 E-value=4.8e-06 Score=71.09 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=64.3
Q ss_pred CCCCceEEEecCCCCCcccH-------HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh----
Q 018930 92 NIQYKKFVLIHGEGFGAWCW-------YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---- 160 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~-------~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---- 160 (348)
..++..||+.-|.++.-+.. ..+.+.....|-+|+.+++||.|.|.... +.++++.+-.+.++.|
T Consensus 134 a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 134 AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhcc
Confidence 34577999999998877761 22333344457899999999999996544 3466666555555554
Q ss_pred -cC-CCcEEEEEECHHHHHHHHHHHhC
Q 018930 161 -LE-DEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 161 -~~-~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
|+ .+.+++.|||+||.++..++..+
T Consensus 210 ~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 210 QGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cCCChheEEEeeccccHHHHHHHHHhc
Confidence 22 14899999999999999877764
No 154
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.49 E-value=3.4e-06 Score=77.41 Aligned_cols=129 Identities=12% Similarity=0.015 Sum_probs=91.4
Q ss_pred cceeeeecccCCeeee--eeecC--CCCceEEEecCCCCCcc---cH--HHHHH---HHHhCCCeEEEeCCCCCCCCCCC
Q 018930 72 RRRTLSESLSNGKQDT--NILEN--IQYKKFVLIHGEGFGAW---CW--YKTVA---SLEEVGLIPTALDLKGSGIDLSD 139 (348)
Q Consensus 72 ~~~~~~~~~~~g~~~~--~~~~~--~~~~~vvllHG~~~~~~---~~--~~~~~---~L~~~G~~vi~~D~~G~G~S~~~ 139 (348)
..+.+..++-||.+++ +|..+ +..|+++..+-++-... .+ ..... .++.+||.|+..|.||.|.|+..
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~ 97 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV 97 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc
Confidence 3455778888998888 44433 45677888882332222 11 11223 57788999999999999999875
Q ss_pred CCCCCC-hHhhhHHHHHHHHhhcC-CCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 140 TNSVTT-LAEYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 140 ~~~~~~-~~~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
.....+ -.+...|++++|.+..- +.+|..+|.|++|...+.+|+..|..++.++...+...
T Consensus 98 ~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 98 FDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 554445 44455677777766532 34999999999999999999988888998887776543
No 155
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.46 E-value=5.6e-07 Score=74.44 Aligned_cols=87 Identities=21% Similarity=0.252 Sum_probs=51.8
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCChHhhhHHH----HHHHHhhcCC-CcEE
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEV--GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPL----LDYLENLLED-EKVI 167 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l----~~~l~~l~~~-~~v~ 167 (348)
.-.|||+||+.++...|..+...+... .+.-..+...++.... .....+++..++.+ .+.++..... .+++
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccccce
Confidence 457999999999999998887777661 1221222222222111 11223455444444 4444333322 3899
Q ss_pred EEEECHHHHHHHHHHH
Q 018930 168 LVGHSSGGACVSYALE 183 (348)
Q Consensus 168 lvGhS~Gg~~a~~~a~ 183 (348)
+|||||||.++-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999876654
No 156
>PLN02606 palmitoyl-protein thioesterase
Probab=98.43 E-value=2.8e-05 Score=65.99 Aligned_cols=102 Identities=18% Similarity=0.177 Sum_probs=69.4
Q ss_pred CceEEEecCCC--CCcccHHHHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc-CCCcEEEEE
Q 018930 95 YKKFVLIHGEG--FGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-EDEKVILVG 170 (348)
Q Consensus 95 ~~~vvllHG~~--~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvG 170 (348)
..|||+.||+| .+...+..+.+.+.+. |+.+..+- .|-|. ...-...+.+.++.+.+.+.... ..+-+.+||
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naIG 101 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELSEGYNIVA 101 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhcCceEEEE
Confidence 45899999999 5556788888877633 66655554 23221 11111345555555555554421 124799999
Q ss_pred ECHHHHHHHHHHHhCCc--ccceEEEeccccc
Q 018930 171 HSSGGACVSYALEHFPQ--KISKAIFLCATMV 200 (348)
Q Consensus 171 hS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~ 200 (348)
+|.||.++-.++++.|+ .|..+|.++++..
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 99999999999999887 5999999998753
No 157
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.40 E-value=3.7e-06 Score=70.16 Aligned_cols=107 Identities=16% Similarity=0.185 Sum_probs=73.3
Q ss_pred CCCceEEEecCCCCCcccHHHHH--HHHHh-CCCeEEEeCCC-------CCCCCCCCC---CCCCChHhhhHHHHHHHHh
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTV--ASLEE-VGLIPTALDLK-------GSGIDLSDT---NSVTTLAEYSKPLLDYLEN 159 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~--~~L~~-~G~~vi~~D~~-------G~G~S~~~~---~~~~~~~~~~~~l~~~l~~ 159 (348)
.+.|.||++||..++...+.... +.|++ .||-|+.+|-- |.|.+..+. ....+...+.+.+..++.+
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~ 138 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNE 138 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHh
Confidence 34578999999999998765544 44444 48999998521 122221111 1222333444455555555
Q ss_pred hcCC-CcEEEEEECHHHHHHHHHHHhCCcccceEEEecccc
Q 018930 160 LLED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 160 l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
.+++ ++|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 139 ~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 139 YGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 5654 589999999999999999999999999998888765
No 158
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.38 E-value=0.00011 Score=63.97 Aligned_cols=106 Identities=10% Similarity=0.093 Sum_probs=69.6
Q ss_pred CceEEEecCCCCCcc---cHHHHHHHHHhCCCeEEEeCCCC--CCCCCC--------------CCCCC------------
Q 018930 95 YKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKG--SGIDLS--------------DTNSV------------ 143 (348)
Q Consensus 95 ~~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G--~G~S~~--------------~~~~~------------ 143 (348)
.-.||+|||.+.+.. .-..+-..|.+.|+..+++.+|. ...... .....
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 348999999998874 45667788999999999999887 111100 00000
Q ss_pred CChHh----hhHHHHHHH---HhhcCCCcEEEEEECHHHHHHHHHHHhCCc-ccceEEEecccccC
Q 018930 144 TTLAE----YSKPLLDYL---ENLLEDEKVILVGHSSGGACVSYALEHFPQ-KISKAIFLCATMVS 201 (348)
Q Consensus 144 ~~~~~----~~~~l~~~l---~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~ 201 (348)
..... +..-|.+.+ ...+.. +++|+||+.|+..++.+....+. .+.++|++++..+.
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~-~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGK-NIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQ 231 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCc
Confidence 01112 222222222 333433 59999999999999999887764 58999999986543
No 159
>PLN02209 serine carboxypeptidase
Probab=98.36 E-value=2.9e-05 Score=70.71 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=47.9
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHhC------------------------CC-CcEEEecCCCCCCCccChHHHHHHHH
Q 018930 288 TGRRFFIQTLDDRALSPDVQEKLVREN------------------------PP-EGVYKIKGSDHCPFFSKPQSLHKILV 342 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~~~~~~~~------------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 342 (348)
.++||+..|..|.+++.-..+.+.+.+ .+ .+++++.+|||++. .+|++....+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 479999999999999987766666554 22 45667889999996 59999999999
Q ss_pred HHhcC
Q 018930 343 EIAQI 347 (348)
Q Consensus 343 ~fl~~ 347 (348)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99863
No 160
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.36 E-value=5.4e-06 Score=67.08 Aligned_cols=82 Identities=18% Similarity=0.172 Sum_probs=55.8
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHhCCCeE-EEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIP-TALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~v-i~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
+...|||..|||++...+..+. +.. ++.| +++|++-.- ++. + + -+. +.+.|||+|
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~--~~~-~~D~l~~yDYr~l~-----------~d~---~----~--~~y-~~i~lvAWS 65 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI--LPE-NYDVLICYDYRDLD-----------FDF---D----L--SGY-REIYLVAWS 65 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc--CCC-CccEEEEecCcccc-----------ccc---c----c--ccC-ceEEEEEEe
Confidence 4578999999999999887764 122 4554 556765211 110 1 1 123 499999999
Q ss_pred HHHHHHHHHHHhCCcccceEEEecccccC
Q 018930 173 SGGACVSYALEHFPQKISKAIFLCATMVS 201 (348)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (348)
||-.+|..+....| ++..|.+++...+
T Consensus 66 mGVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 66 MGVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred HHHHHHHHHhccCC--cceeEEEECCCCC
Confidence 99999988876554 7777888876543
No 161
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.25 E-value=8.4e-06 Score=75.11 Aligned_cols=108 Identities=20% Similarity=0.177 Sum_probs=70.7
Q ss_pred CCCceEEEecCCCCCcccH--HHHHHHHHhC-CCeEEEeCCCCCCCCCCC------CCCCCChHhhhHHHHHHHHhhc--
Q 018930 93 IQYKKFVLIHGEGFGAWCW--YKTVASLEEV-GLIPTALDLKGSGIDLSD------TNSVTTLAEYSKPLLDYLENLL-- 161 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~--~~~~~~L~~~-G~~vi~~D~~G~G~S~~~------~~~~~~~~~~~~~l~~~l~~l~-- 161 (348)
+++|++|++-|-+.-...| ..++..|+++ |--|+++++|-+|+|.+- .-...+.++..+|++.+++++.
T Consensus 27 ~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 27 PGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 3477777776655433322 2244445543 667999999999999531 2244688899999999998764
Q ss_pred ----CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 162 ----EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 162 ----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
.+.|++++|-|+||++|..+-.+||+.|.+.+..+++..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 224899999999999999999999999999998887753
No 162
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.24 E-value=2.3e-06 Score=72.76 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=66.1
Q ss_pred CCCceEEEecCCCCCcccH--HHHHHHHHhCC----CeEEEeCCCCCCCC--CCC--------CCCC---CC-hHhhhHH
Q 018930 93 IQYKKFVLIHGEGFGAWCW--YKTVASLEEVG----LIPTALDLKGSGID--LSD--------TNSV---TT-LAEYSKP 152 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~--~~~~~~L~~~G----~~vi~~D~~G~G~S--~~~--------~~~~---~~-~~~~~~~ 152 (348)
..-|+|+++||.......+ ...++.+...| .-+++++..+.+.. +.. .... .. .+.+.++
T Consensus 22 ~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 4467999999972222222 23344344432 34566665555411 000 0011 11 2334556
Q ss_pred HHHHHHhh-cCC-CcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccC
Q 018930 153 LLDYLENL-LED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (348)
Q Consensus 153 l~~~l~~l-~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 201 (348)
|..+|++. ... .+..|+|+||||..|+.++.+||+.+.+++.+++....
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 66676663 222 13899999999999999999999999999999986543
No 163
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.24 E-value=2.6e-05 Score=70.74 Aligned_cols=116 Identities=14% Similarity=0.183 Sum_probs=71.2
Q ss_pred eeeeeeecC----CCCceEEEecCCCCCcc-cHHHHHHHHHhCCC----eEEEeCCCCC-CCCCCCCCCCCChHhhhHHH
Q 018930 84 KQDTNILEN----IQYKKFVLIHGEGFGAW-CWYKTVASLEEVGL----IPTALDLKGS-GIDLSDTNSVTTLAEYSKPL 153 (348)
Q Consensus 84 ~~~~~~~~~----~~~~~vvllHG~~~~~~-~~~~~~~~L~~~G~----~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~l 153 (348)
..+++|..+ ..-|+|+|+||-.-... .....++.|.+.|. -++.+|..+. ..+..-.........++++|
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eL 273 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQEL 273 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHH
Confidence 455555432 34589999999542221 22345566666553 3577775321 11111011111233455666
Q ss_pred HHHHHhh-c---CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccc
Q 018930 154 LDYLENL-L---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 154 ~~~l~~l-~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
.-++++. . ..++.+|+|+||||..|+.++.++|+++.+++.+++..
T Consensus 274 lP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 274 LPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 6677664 1 12478999999999999999999999999999999853
No 164
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.23 E-value=5.5e-06 Score=75.22 Aligned_cols=159 Identities=14% Similarity=0.168 Sum_probs=98.0
Q ss_pred CceEEEecCCC--CCcc----cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh--------h
Q 018930 95 YKKFVLIHGEG--FGAW----CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN--------L 160 (348)
Q Consensus 95 ~~~vvllHG~~--~~~~----~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~--------l 160 (348)
.|.++++||.+ .... .|........+. ..|.+||++.- .+..++..-++.+..+... +
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~-------igG~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNP-------IGGANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCC-------CCCcchHHHHHHHHHHhhhhhhhhhccC
Confidence 57899999988 1112 233333333332 56677887621 1113566666655555542 2
Q ss_pred cCCCcEEEEEECHHHHHHHHHHHhCC-cccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCCCCCc
Q 018930 161 LEDEKVILVGHSSGGACVSYALEHFP-QKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDKPPTG 239 (348)
Q Consensus 161 ~~~~~v~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (348)
.. .+++|+|.|||+.++........ .-|.++|+++=+........ +
T Consensus 248 ph-a~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr--------g------------------------ 294 (784)
T KOG3253|consen 248 PH-APIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR--------G------------------------ 294 (784)
T ss_pred CC-CceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc--------C------------------------
Confidence 23 48999999999888777765432 23777777764322110000 0
Q ss_pred hhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC-CCc
Q 018930 240 FMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP-PEG 318 (348)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~-~~~ 318 (348)
+. ...+-.+ +.|+||+.|.+|..+++...+.+.++.. ..+
T Consensus 295 -------ir------------------------DE~Lldm--------k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~e 335 (784)
T KOG3253|consen 295 -------IR------------------------DEALLDM--------KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVE 335 (784)
T ss_pred -------Cc------------------------chhhHhc--------CCceEEEecCCcccCCHHHHHHHHHHhhccce
Confidence 00 0000011 3899999999999999999999998874 568
Q ss_pred EEEecCCCCCCCccC
Q 018930 319 VYKIKGSDHCPFFSK 333 (348)
Q Consensus 319 ~~~i~~~gH~~~~e~ 333 (348)
++++.+++|.+-...
T Consensus 336 lhVI~~adhsmaipk 350 (784)
T KOG3253|consen 336 LHVIGGADHSMAIPK 350 (784)
T ss_pred EEEecCCCccccCCc
Confidence 999999999876543
No 165
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.22 E-value=0.00048 Score=62.87 Aligned_cols=59 Identities=14% Similarity=0.052 Sum_probs=47.8
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHhC------------------------CC-CcEEEecCCCCCCCccChHHHHHHHH
Q 018930 288 TGRRFFIQTLDDRALSPDVQEKLVREN------------------------PP-EGVYKIKGSDHCPFFSKPQSLHKILV 342 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~~~~~~~~------------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 342 (348)
.++||+..|..|.++|.-..+.+.+.+ .+ .+++++.++||++. .+|++....+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 479999999999999988777666554 11 34567888999996 59999999999
Q ss_pred HHhcC
Q 018930 343 EIAQI 347 (348)
Q Consensus 343 ~fl~~ 347 (348)
.|++.
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99863
No 166
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.20 E-value=7.1e-06 Score=67.04 Aligned_cols=240 Identities=13% Similarity=0.136 Sum_probs=118.6
Q ss_pred cCCCCceEEEecCCCCCcccHH-HHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHH--------HHHH----
Q 018930 91 ENIQYKKFVLIHGEGFGAWCWY-KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPL--------LDYL---- 157 (348)
Q Consensus 91 ~~~~~~~vvllHG~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l--------~~~l---- 157 (348)
..+.++.-+++-|-|.+...-+ .+.+.+.++|...+.+.-|-||..... ......-+.+.|+ .+..
T Consensus 109 PQK~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~-~q~~~~Le~vtDlf~mG~A~I~E~~~lf~ 187 (371)
T KOG1551|consen 109 PQKMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPE-EQIIHMLEYVTDLFKMGRATIQEFVKLFT 187 (371)
T ss_pred ccCcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCH-HHHHHHHHHHHHHHHhhHHHHHHHHHhcc
Confidence 3344454444444444433222 345566667899999999999976432 2111111222221 2222
Q ss_pred --HhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchhhhhhhhhhhhhcCCCCC
Q 018930 158 --ENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAERFMQESQFLIYGNGKDK 235 (348)
Q Consensus 158 --~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (348)
+..+.+ +..|+|-||||.+|..+...++..|+-+=++++....... ....+........++.......-+ ....
T Consensus 188 Ws~~~g~g-~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~-teg~l~~~~s~~~~~~~~t~~~~~--~~r~ 263 (371)
T KOG1551|consen 188 WSSADGLG-NLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSA-TEGLLLQDTSKMKRFNQTTNKSGY--TSRN 263 (371)
T ss_pred cccccCcc-cceeeeeecccHHHHhhcccCCCCccccccccccccchhh-hhhhhhhhhHHHHhhccCcchhhh--hhhC
Confidence 223566 9999999999999999999887767655555442211100 000111100000000000000000 0000
Q ss_pred CCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhCC
Q 018930 236 PPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVRENP 315 (348)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~~ 315 (348)
+...+.. ..+..-.+ ........+.... +..........+.. .-=++++.+++|..+|......+.+.+|
T Consensus 264 p~Q~~~~---~~~~~srn--~~~E~~~~Mr~vm--d~~T~v~~fp~Pvd---psl~ivv~A~~D~Yipr~gv~~lQ~~WP 333 (371)
T KOG1551|consen 264 PAQSYHL---LSKEQSRN--SRKESLIFMRGVM--DECTHVANFPVPVD---PSLIIVVQAKEDAYIPRTGVRSLQEIWP 333 (371)
T ss_pred chhhHHH---HHHHhhhc--chHHHHHHHHHHH--HhhchhhcCCCCCC---CCeEEEEEecCCccccccCcHHHHHhCC
Confidence 0000000 00000000 1111111111100 00001111110000 1126788899999999988899999999
Q ss_pred CCcEEEecCCCCC-CCccChHHHHHHHHHHhc
Q 018930 316 PEGVYKIKGSDHC-PFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 316 ~~~~~~i~~~gH~-~~~e~p~~~~~~i~~fl~ 346 (348)
++++..++ +||. .++.+-+++.+.|.+-|.
T Consensus 334 g~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~ 364 (371)
T KOG1551|consen 334 GCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLD 364 (371)
T ss_pred CCEEEEee-cCceeeeehhchHHHHHHHHHHH
Confidence 99999999 6897 566788999999988764
No 167
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.17 E-value=1.5e-05 Score=68.64 Aligned_cols=106 Identities=21% Similarity=0.239 Sum_probs=67.1
Q ss_pred CCCceEEEecCCCCCccc-HHHHHHHHHhCC--CeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh----cCCCc
Q 018930 93 IQYKKFVLIHGEGFGAWC-WYKTVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LEDEK 165 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~-~~~~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 165 (348)
..+..+||+||+..+-.. -...++-....| ...+.+.||-.|.--.-.....+...-..+|+.+|..| ... +
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~-~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVK-R 192 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCc-e
Confidence 456799999999877653 344444444444 46788999987753211111223333344444555444 444 8
Q ss_pred EEEEEECHHHHHHHHHHHh--------CCcccceEEEecccc
Q 018930 166 VILVGHSSGGACVSYALEH--------FPQKISKAIFLCATM 199 (348)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~~--------~p~~v~~lvl~~~~~ 199 (348)
|+|++||||.++++..... .+.+++-+|+.+|-.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 9999999999999888754 234677788777643
No 168
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.12 E-value=1.2e-05 Score=57.90 Aligned_cols=59 Identities=8% Similarity=0.121 Sum_probs=53.5
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 288 TGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
..|+|+|.++.|+++|.+.++.+.+.+++++++.+++.||..+...-.-+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999887555677888889885
No 169
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.10 E-value=0.00026 Score=62.30 Aligned_cols=105 Identities=19% Similarity=0.178 Sum_probs=69.2
Q ss_pred CCceEEEecCCCCCcccHHHHH-------HHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcE
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTV-------ASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKV 166 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~-------~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v 166 (348)
..|+||++||.|..-......+ ..|. ...+++.|+.-..--.....-..-+.+.++....+++..+.+ ++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~-nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNK-NI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCC-eE
Confidence 4689999999987666433322 2333 358888887643300011222335666667677777666776 99
Q ss_pred EEEEECHHHHHHHHHHHhC--Cc---ccceEEEecccccC
Q 018930 167 ILVGHSSGGACVSYALEHF--PQ---KISKAIFLCATMVS 201 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~--p~---~v~~lvl~~~~~~~ 201 (348)
+|+|-|-||.+++.+++.. ++ .-+++|+++|....
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 9999999999998887532 11 25789999997644
No 170
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.09 E-value=5.1e-05 Score=71.24 Aligned_cols=104 Identities=17% Similarity=0.130 Sum_probs=66.7
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHh----------------CCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHH
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEE----------------VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL 157 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~----------------~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 157 (348)
++-||+|++|..|+...-+.++..... ..|+..++|+-+- ...-...++.++++-+.+.|
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hhhhccHhHHHHHHHHHHHH
Confidence 466999999999998887776654442 1356677775320 01122346777777666666
Q ss_pred Hhh-----c-------CCCcEEEEEECHHHHHHHHHHHh---CCcccceEEEecccccC
Q 018930 158 ENL-----L-------EDEKVILVGHSSGGACVSYALEH---FPQKISKAIFLCATMVS 201 (348)
Q Consensus 158 ~~l-----~-------~~~~v~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~~~~ 201 (348)
+.. + ....|+||||||||.+|...+.. .++.|.-++..+++...
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 542 1 11359999999999999877742 23456667767665433
No 171
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.04 E-value=2.1e-05 Score=70.96 Aligned_cols=83 Identities=29% Similarity=0.410 Sum_probs=60.8
Q ss_pred cHHHHHHHHHhCCCeE-----EE-eCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh---cCCCcEEEEEECHHHHHHHH
Q 018930 110 CWYKTVASLEEVGLIP-----TA-LDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVILVGHSSGGACVSY 180 (348)
Q Consensus 110 ~~~~~~~~L~~~G~~v-----i~-~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~ 180 (348)
.|..+++.|.+.||.. .+ +|+|-- .. ..+++...|...|+.. . +++|+||||||||.++..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~------~~---~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS------PA---ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc------hh---hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHH
Confidence 8999999999988752 23 788721 11 3445555555555553 3 469999999999999999
Q ss_pred HHHhCCc------ccceEEEecccccCC
Q 018930 181 ALEHFPQ------KISKAIFLCATMVSD 202 (348)
Q Consensus 181 ~a~~~p~------~v~~lvl~~~~~~~~ 202 (348)
+....+. .|+++|.++++....
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9987743 599999999886544
No 172
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.03 E-value=0.00042 Score=62.86 Aligned_cols=125 Identities=15% Similarity=0.041 Sum_probs=76.5
Q ss_pred eeeecccCCeeeeeee-c----CCCCceEEEecCCCCCcccHHHHHHHHH-----hC-------------CCeEEEeCCC
Q 018930 75 TLSESLSNGKQDTNIL-E----NIQYKKFVLIHGEGFGAWCWYKTVASLE-----EV-------------GLIPTALDLK 131 (348)
Q Consensus 75 ~~~~~~~~g~~~~~~~-~----~~~~~~vvllHG~~~~~~~~~~~~~~L~-----~~-------------G~~vi~~D~~ 131 (348)
-+......+..+.|++ + +...|.||.+.|.++.+..- .++.++- .. --+++.+|.|
T Consensus 48 Yv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~P 126 (454)
T KOG1282|consen 48 YVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQP 126 (454)
T ss_pred eEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecC
Confidence 3455555677777654 2 23478999999999888754 2222211 01 1368999988
Q ss_pred -CCCCCCCCCCC--CCChHhhhHHHHHHHHh----hc--CCCcEEEEEECHHHHHHHHHHHh----CC------cccceE
Q 018930 132 -GSGIDLSDTNS--VTTLAEYSKPLLDYLEN----LL--EDEKVILVGHSSGGACVSYALEH----FP------QKISKA 192 (348)
Q Consensus 132 -G~G~S~~~~~~--~~~~~~~~~~l~~~l~~----l~--~~~~v~lvGhS~Gg~~a~~~a~~----~p------~~v~~l 192 (348)
|.|.|-..... ..+-+..++|+..+|.+ .. ...+++|.|-|++|..+-.+|.. .. -.++|+
T Consensus 127 vGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~ 206 (454)
T KOG1282|consen 127 VGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGY 206 (454)
T ss_pred CcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEE
Confidence 99988432221 12444555666665544 21 12499999999999877666643 21 246777
Q ss_pred EEeccccc
Q 018930 193 IFLCATMV 200 (348)
Q Consensus 193 vl~~~~~~ 200 (348)
++-++...
T Consensus 207 ~IGNg~td 214 (454)
T KOG1282|consen 207 AIGNGLTD 214 (454)
T ss_pred EecCcccC
Confidence 76666543
No 173
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.02 E-value=3.7e-05 Score=60.87 Aligned_cols=106 Identities=20% Similarity=0.155 Sum_probs=70.3
Q ss_pred CCceEEEecCCCCCcccHHH---HHHHHHhCCCeEEEeCCCCCCCC-----CC-CCC---------------CCCChHh-
Q 018930 94 QYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLKGSGID-----LS-DTN---------------SVTTLAE- 148 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~S-----~~-~~~---------------~~~~~~~- 148 (348)
.-|++.++.|+..+.+.|.. +-..-.+.|+.|+++|-.-.|-. +. +-. ..|.+-+
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 36899999999999987743 33445567899999996544322 10 000 0112222
Q ss_pred hhHHHHHHHHh----hcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 149 YSKPLLDYLEN----LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 149 ~~~~l~~~l~~----l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
.+++|.+++.. +... ++.|.||||||.-|+..+.+.|.+.+++-..+|...
T Consensus 123 v~kELp~~l~~~~~pld~~-k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPL-KVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHHhccccccccch-hcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 23444455542 2233 799999999999999999999999888877776543
No 174
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.95 E-value=0.00011 Score=63.81 Aligned_cols=58 Identities=14% Similarity=0.235 Sum_probs=47.2
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHhCCC--CcEEEecCCCCCCCccChH---HHHHHHHHHhc
Q 018930 289 GRRFFIQTLDDRALSPDVQEKLVRENPP--EGVYKIKGSDHCPFFSKPQ---SLHKILVEIAQ 346 (348)
Q Consensus 289 ~Pvl~i~G~~D~~vp~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~ 346 (348)
+|+|+++|..|.++|......+.+.... .+...+++++|......+. +..+.+.+|+.
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~ 295 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLE 295 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHH
Confidence 7999999999999999999888887755 5777888999998865443 56777777765
No 175
>COG3150 Predicted esterase [General function prediction only]
Probab=97.87 E-value=4.4e-05 Score=58.15 Aligned_cols=89 Identities=13% Similarity=0.132 Sum_probs=64.2
Q ss_pred EEEecCCCCCcccHHHHH--HHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHH
Q 018930 98 FVLIHGEGFGAWCWYKTV--ASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (348)
Q Consensus 98 vvllHG~~~~~~~~~~~~--~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (348)
||++||+.+++....... +.+... .+.+.+ +. +.-..++.+.++.+..++..++.. ...|||.|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y-------~~--p~l~h~p~~a~~ele~~i~~~~~~-~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEY-------ST--PHLPHDPQQALKELEKAVQELGDE-SPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceee-------ec--CCCCCCHHHHHHHHHHHHHHcCCC-CceEEeecchH
Confidence 899999999999887643 233332 232222 22 122358889999999999999875 79999999999
Q ss_pred HHHHHHHHhCCcccceEEEeccccc
Q 018930 176 ACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 176 ~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
+.|..++.++. ++.++ ++|+..
T Consensus 71 Y~At~l~~~~G--irav~-~NPav~ 92 (191)
T COG3150 71 YYATWLGFLCG--IRAVV-FNPAVR 92 (191)
T ss_pred HHHHHHHHHhC--Chhhh-cCCCcC
Confidence 99999999865 55544 677643
No 176
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.82 E-value=0.0022 Score=59.73 Aligned_cols=128 Identities=13% Similarity=0.102 Sum_probs=88.1
Q ss_pred ceeeeecccCCeeee---eee----cCCCCceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCC------
Q 018930 73 RRTLSESLSNGKQDT---NIL----ENIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDL------ 137 (348)
Q Consensus 73 ~~~~~~~~~~g~~~~---~~~----~~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~------ 137 (348)
.+++..+..+|.++. ++. -++++|++|..-|.-+... .|....-.|.++||-....--||=|.=.
T Consensus 419 s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~ 498 (682)
T COG1770 419 SRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYED 498 (682)
T ss_pred EEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHh
Confidence 345555657776665 222 2345677777766644443 3554455677889877777778866532
Q ss_pred -CCCCCCCChHhhhHHHHHHHHhh-cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 138 -SDTNSVTTLAEYSKPLLDYLENL-LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 138 -~~~~~~~~~~~~~~~l~~~l~~l-~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
.-.....++.|+++....+++.- +..+.++++|-|-||++.-.++...|+.++++|+--|+..
T Consensus 499 GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 499 GKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred hhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 12234568888888887777652 2234899999999999999999999999999998877543
No 177
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.79 E-value=7e-05 Score=70.34 Aligned_cols=106 Identities=21% Similarity=0.209 Sum_probs=63.8
Q ss_pred CCCceEEEecCCCCCc---ccHHHHHHHHHhC--CCeEEEeCCC-C---CCCCCC-CCCCCCChHhhhH---HHHHHHHh
Q 018930 93 IQYKKFVLIHGEGFGA---WCWYKTVASLEEV--GLIPTALDLK-G---SGIDLS-DTNSVTTLAEYSK---PLLDYLEN 159 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~---~~~~~~~~~L~~~--G~~vi~~D~~-G---~G~S~~-~~~~~~~~~~~~~---~l~~~l~~ 159 (348)
.+.|+||++||.+... ..+ ....|... |+-|+.+++| | +..+.. .......+.|... .+.+.++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 4468999999965322 221 22334433 3899999998 3 332221 1122233444443 34444444
Q ss_pred hcC-CCcEEEEEECHHHHHHHHHHHh--CCcccceEEEeccccc
Q 018930 160 LLE-DEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMV 200 (348)
Q Consensus 160 l~~-~~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 200 (348)
.+. .++|+|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 443 2599999999999998888764 2346888888877543
No 178
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.75 E-value=0.00087 Score=61.58 Aligned_cols=124 Identities=15% Similarity=0.130 Sum_probs=84.4
Q ss_pred eeeeecccCCeeeeeeec--C---CCCceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCCC-------C
Q 018930 74 RTLSESLSNGKQDTNILE--N---IQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLS-------D 139 (348)
Q Consensus 74 ~~~~~~~~~g~~~~~~~~--~---~~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~-------~ 139 (348)
++......||.++.|+.- + .+.|++|+--|...-+. .|........++|...+..++||=|+=.. .
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhh
Confidence 344445568888886542 1 13667666655443333 46666677777799999999999886421 1
Q ss_pred CCCCCChHhhhHHHHHHHHhh-cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecc
Q 018930 140 TNSVTTLAEYSKPLLDYLENL-LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (348)
Q Consensus 140 ~~~~~~~~~~~~~l~~~l~~l-~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (348)
.+....++|+++..++++++- ...+++.+.|-|-||.+.-.+..++|+.+.++|+--|
T Consensus 475 ~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 234456777777777776552 1235899999999999988888889998888776554
No 179
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.69 E-value=6.9e-05 Score=63.11 Aligned_cols=105 Identities=15% Similarity=0.154 Sum_probs=56.7
Q ss_pred CCceEEEecCCCCCc---ccHHHHHHHHHhC--CCeEEEeCCCCCCCC-CCCCCCCCChHhhhHHHHHHHHhhc-CCCcE
Q 018930 94 QYKKFVLIHGEGFGA---WCWYKTVASLEEV--GLIPTALDLKGSGID-LSDTNSVTTLAEYSKPLLDYLENLL-EDEKV 166 (348)
Q Consensus 94 ~~~~vvllHG~~~~~---~~~~~~~~~L~~~--G~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~v 166 (348)
...|||+.||+|.+. ..+..+.+.+.+. |.-|..+++ |-+.+ +....-...+.+.++.+.+.+.... ..+-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 345899999999754 3455554444432 677888876 22211 1000111245566666666665432 22479
Q ss_pred EEEEECHHHHHHHHHHHhCCc-ccceEEEecccc
Q 018930 167 ILVGHSSGGACVSYALEHFPQ-KISKAIFLCATM 199 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 199 (348)
+++|+|-||.++-.++++.|+ .|..+|.++++.
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 999999999999999999865 699999999864
No 180
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.65 E-value=0.00049 Score=60.79 Aligned_cols=156 Identities=12% Similarity=0.141 Sum_probs=90.3
Q ss_pred HHHHHHHHhh---cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCCCCChhhHHHHhhcchh-hhhhhhhh
Q 018930 151 KPLLDYLENL---LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEELGSAE-RFMQESQF 226 (348)
Q Consensus 151 ~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 226 (348)
+.+.+++++. .++ ++++.|.|==|..+...|. -.+||++++-+.-.... ....+........ .+....
T Consensus 157 D~vq~~~~~~~~~~i~-~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN----~~~~l~h~y~~yG~~ws~a~-- 228 (367)
T PF10142_consen 157 DAVQEFLKKKFGVNIE-KFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLN----MKANLEHQYRSYGGNWSFAF-- 228 (367)
T ss_pred HHHHHHHHhhcCCCcc-EEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCC----cHHHHHHHHHHhCCCCccch--
Confidence 3444555544 565 9999999999999999998 56789888766543322 1111111111110 000000
Q ss_pred hhhcCCCCCCCCchhhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHH
Q 018930 227 LIYGNGKDKPPTGFMFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDV 306 (348)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~ 306 (348)
.....+-+.................+..+. +++ ++|.++|.|..|.+..++.
T Consensus 229 -----------------~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~---~rL--------~~PK~ii~atgDeFf~pD~ 280 (367)
T PF10142_consen 229 -----------------QDYYNEGITQQLDTPEFDKLMQIVDPYSYR---DRL--------TMPKYIINATGDEFFVPDS 280 (367)
T ss_pred -----------------hhhhHhCchhhcCCHHHHHHHHhcCHHHHH---Hhc--------CccEEEEecCCCceeccCc
Confidence 001111111111222222222223332222 333 3899999999999999999
Q ss_pred HHHHHHhCCCC-cEEEecCCCCCCCccChHHHHHHHHHHh
Q 018930 307 QEKLVRENPPE-GVYKIKGSDHCPFFSKPQSLHKILVEIA 345 (348)
Q Consensus 307 ~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl 345 (348)
...+.+.+|+. .+..+|+++|.... ..+...|..|+
T Consensus 281 ~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~ 317 (367)
T PF10142_consen 281 SNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFY 317 (367)
T ss_pred hHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHH
Confidence 99999999865 56679999999865 45555566664
No 181
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.65 E-value=0.00078 Score=53.58 Aligned_cols=106 Identities=23% Similarity=0.225 Sum_probs=65.4
Q ss_pred CCceEEEecCCCCCc-ccHHH---------------HHHHHHhCCCeEEEeCCCC---CCCCC-CCCCCCCChHhhhH-H
Q 018930 94 QYKKFVLIHGEGFGA-WCWYK---------------TVASLEEVGLIPTALDLKG---SGIDL-SDTNSVTTLAEYSK-P 152 (348)
Q Consensus 94 ~~~~vvllHG~~~~~-~~~~~---------------~~~~L~~~G~~vi~~D~~G---~G~S~-~~~~~~~~~~~~~~-~ 152 (348)
....+|+|||.|.-. ..|.+ +++.-.+.||.|++.+--- +-.+. .+.....+..+.+. .
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 355899999988543 35632 3455556699999987431 11111 11111112222222 2
Q ss_pred HHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCc--ccceEEEeccccc
Q 018930 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ--KISKAIFLCATMV 200 (348)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~ 200 (348)
...++.-... +.+.+|.||+||...+.+..++|+ +|.++.+.++++.
T Consensus 180 w~~~v~pa~~-~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 180 WKNIVLPAKA-ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred HHHHhcccCc-ceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 2333333444 489999999999999999999884 6888888887643
No 182
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.56 E-value=0.0011 Score=56.54 Aligned_cols=102 Identities=16% Similarity=0.164 Sum_probs=67.7
Q ss_pred CCceEEEecCCCCCcc--cHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc-CCCcEEEE
Q 018930 94 QYKKFVLIHGEGFGAW--CWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-EDEKVILV 169 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~--~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lv 169 (348)
...|+|+.||+|.+.. ....+.+.+.+ .|..+..+.. |.+ ....-...+.+.++.+.+.+.... ..+-+.+|
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 3458999999987765 34445555543 2566666654 322 112222355566665555554421 12479999
Q ss_pred EECHHHHHHHHHHHhCCc--ccceEEEecccc
Q 018930 170 GHSSGGACVSYALEHFPQ--KISKAIFLCATM 199 (348)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 199 (348)
|+|.||.++-.++++.|+ .|..+|.++++.
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999987 599999999864
No 183
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.56 E-value=0.017 Score=50.88 Aligned_cols=59 Identities=14% Similarity=0.045 Sum_probs=47.4
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHhCC------------------------C-CcEEEecCCCCCCCccChHHHHHHHH
Q 018930 288 TGRRFFIQTLDDRALSPDVQEKLVRENP------------------------P-EGVYKIKGSDHCPFFSKPQSLHKILV 342 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~~~~~~~~~------------------------~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 342 (348)
.++||+..|..|.+++.-..+.+.+.+. + .+++++.++||+++ .+|++..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999999999877666665541 1 45566779999996 59999999999
Q ss_pred HHhcC
Q 018930 343 EIAQI 347 (348)
Q Consensus 343 ~fl~~ 347 (348)
.|++.
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99863
No 184
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.55 E-value=0.00029 Score=61.64 Aligned_cols=104 Identities=15% Similarity=0.104 Sum_probs=74.7
Q ss_pred ceEEEecCCCCCcccHHH---HHHHHHh-CCCeEEEeCCCCCCCCCCCC---------CCCCChHhhhHHHHHHHHhhcC
Q 018930 96 KKFVLIHGEGFGAWCWYK---TVASLEE-VGLIPTALDLKGSGIDLSDT---------NSVTTLAEYSKPLLDYLENLLE 162 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~---~~~~L~~-~G~~vi~~D~~G~G~S~~~~---------~~~~~~~~~~~~l~~~l~~l~~ 162 (348)
.+|+|--|.-++.+.|.. ++-.++. .+--+|..++|-+|+|-+-. -+..+.++-.+|.+++|..+..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 578888998888776543 2222222 24568999999999994311 1234566666777777777642
Q ss_pred -----CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccc
Q 018930 163 -----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 163 -----~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
..+|+.+|-|+||++|..+=.+||..|.|.+..+++.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 2589999999999999999999999998877666553
No 185
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.50 E-value=0.00029 Score=65.05 Aligned_cols=91 Identities=15% Similarity=0.221 Sum_probs=56.5
Q ss_pred ccHHHHHHHHHhCCCeEEEeCCCCCCCCCC-CCCCCCChHhhhHHHHHHHHhh---cCCCcEEEEEECHHHHHHHHHHHh
Q 018930 109 WCWYKTVASLEEVGLIPTALDLKGSGIDLS-DTNSVTTLAEYSKPLLDYLENL---LEDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 109 ~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
+.|..+++.|.+.||. -.|+.|-...=. .......-+++-..|..+|+.. +-+++++|+||||||.+++.+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 4679999999999986 333333222100 0011112244545555555543 323599999999999999998763
Q ss_pred CC---------------cccceEEEecccccC
Q 018930 185 FP---------------QKISKAIFLCATMVS 201 (348)
Q Consensus 185 ~p---------------~~v~~lvl~~~~~~~ 201 (348)
.. +.|++.|.++++...
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccCC
Confidence 21 247889999887644
No 186
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.50 E-value=0.0015 Score=60.46 Aligned_cols=127 Identities=15% Similarity=0.101 Sum_probs=85.1
Q ss_pred ceeeeecccCCeeee--e-ee----cCCCCceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCC------
Q 018930 73 RRTLSESLSNGKQDT--N-IL----ENIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDL------ 137 (348)
Q Consensus 73 ~~~~~~~~~~g~~~~--~-~~----~~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~------ 137 (348)
..++..+..||..+. + +. .+++.|.+|..+|.-+-.- .|..--..|.+.|+-....|.||=|.-.
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~ 520 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKD 520 (712)
T ss_pred EEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhc
Confidence 345666777887765 1 22 2345676666655433222 3544334455678888888999977532
Q ss_pred -CCCCCCCChHhhhHHHHHHHHhh-cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccc
Q 018930 138 -SDTNSVTTLAEYSKPLLDYLENL-LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 138 -~~~~~~~~~~~~~~~l~~~l~~l-~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
.-.....+++|+.....-+++.- ...++..+.|.|-||.++-.+...+|+.+.++|+--|.+
T Consensus 521 G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 521 GRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred cchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 12234567888888777777652 223589999999999999999999999999888766643
No 187
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.45 E-value=0.0017 Score=53.66 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=70.4
Q ss_pred ceEEEecCCCCCccc--HHHHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc-CCCcEEEEEE
Q 018930 96 KKFVLIHGEGFGAWC--WYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-EDEKVILVGH 171 (348)
Q Consensus 96 ~~vvllHG~~~~~~~--~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvGh 171 (348)
.|+|++||++.+... ...+.+.+.+. |..|++.|. |-|. .......+.+.++.+.+.+.... ..+-+.++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~---~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGI---KDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCc---chhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 589999999998886 67777777664 778888885 3341 11122345566665555554321 2357999999
Q ss_pred CHHHHHHHHHHHhCCc-ccceEEEecccc
Q 018930 172 SSGGACVSYALEHFPQ-KISKAIFLCATM 199 (348)
Q Consensus 172 S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 199 (348)
|.||.++-.+++.-++ .|..+|.++++.
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 9999999999987543 488888888764
No 188
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.41 E-value=0.0013 Score=59.18 Aligned_cols=109 Identities=17% Similarity=0.194 Sum_probs=84.1
Q ss_pred CCCCceEEEecCCCCCcccHH-----HHHHHHHhCCCeEEEeCCCCCCCCCCCCC------CCCChHhhhHHHHHHHHhh
Q 018930 92 NIQYKKFVLIHGEGFGAWCWY-----KTVASLEEVGLIPTALDLKGSGIDLSDTN------SVTTLAEYSKPLLDYLENL 160 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~-----~~~~~L~~~G~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~l 160 (348)
..++|..++|-|-+.-...|- .+...-++.|-.|+..++|-+|.|.+-.. ...+..+...|++++|+++
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 467899999999877765552 23344445578999999999998843211 3346778889999999887
Q ss_pred cCC------CcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 161 LED------EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 161 ~~~------~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
+.. .+.+.+|-|+-|.++..+=++||+.+.+.|..+++..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 532 2899999999999999999999999999988777653
No 189
>COG0627 Predicted esterase [General function prediction only]
Probab=97.39 E-value=0.0008 Score=58.50 Aligned_cols=109 Identities=17% Similarity=0.160 Sum_probs=68.3
Q ss_pred CCceEEEecCCCCCcccHH---HHHHHHHhCCCeEEEeCCC--------------CCCCCC---C---CCC-CCCChHh-
Q 018930 94 QYKKFVLIHGEGFGAWCWY---KTVASLEEVGLIPTALDLK--------------GSGIDL---S---DTN-SVTTLAE- 148 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~---~~~~~L~~~G~~vi~~D~~--------------G~G~S~---~---~~~-~~~~~~~- 148 (348)
.-|+++++||..++...|. .+-......|+.++++|-. |-+.|- . +.. ..+.+++
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 4568888899888764432 2334444556777776322 333321 0 000 1134443
Q ss_pred hhHHHHHHHHh-hcCCC---cEEEEEECHHHHHHHHHHHhCCcccceEEEecccccCC
Q 018930 149 YSKPLLDYLEN-LLEDE---KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (348)
Q Consensus 149 ~~~~l~~~l~~-l~~~~---~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (348)
+.+++-..+++ ..... +..++||||||.-|+.+|.++|++++.+..+++.....
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 34456544443 33221 68999999999999999999999999999888876544
No 190
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.37 E-value=0.0019 Score=53.25 Aligned_cols=100 Identities=18% Similarity=0.086 Sum_probs=59.0
Q ss_pred ceEEEecCCCCCcc---cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC---CcEEEE
Q 018930 96 KKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED---EKVILV 169 (348)
Q Consensus 96 ~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~---~~v~lv 169 (348)
-+|=|+-|...++. .|+.+.+.|.++||.|++.=+.- |.. ...-...-+..+-..+..+.+.-+.. -+++-+
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tfD-H~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~v 95 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TFD-HQAIAREVWERFERCLRALQKRGGLDPAYLPVYGV 95 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CCc-HHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeee
Confidence 36777777755554 68899999999999999976531 100 00000001111222222222221211 267889
Q ss_pred EECHHHHHHHHHHHhCCcccceEEEecc
Q 018930 170 GHSSGGACVSYALEHFPQKISKAIFLCA 197 (348)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (348)
|||+|+-+-+.+...++..-++-|+++-
T Consensus 96 GHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 96 GHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred ecccchHHHHHHhhhccCcccceEEEec
Confidence 9999999988888777655566676653
No 191
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.32 E-value=0.0073 Score=47.77 Aligned_cols=106 Identities=19% Similarity=0.203 Sum_probs=65.7
Q ss_pred CceEEEecCCCCCcccHH----H----HHHH----HHh--CCCeEEEeCCCCCCCCCC---CCCCCCChHhhhHHHHHHH
Q 018930 95 YKKFVLIHGEGFGAWCWY----K----TVAS----LEE--VGLIPTALDLKGSGIDLS---DTNSVTTLAEYSKPLLDYL 157 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~----~----~~~~----L~~--~G~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~~l~~~l 157 (348)
..+.++++|.+.+..... . +.+. +.. .+-.|-++-|-||---.. ......--+.-+..|..|+
T Consensus 19 ~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f~ 98 (177)
T PF06259_consen 19 DHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARFL 98 (177)
T ss_pred CeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHHH
Confidence 568999999988776321 1 1111 111 123455555555542100 0111122345566777777
Q ss_pred Hhhc----CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 158 ENLL----EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 158 ~~l~----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
+.|. .+..+.++|||+|+.++-.++...+..+..+|+++++..
T Consensus 99 ~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 99 DGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 7664 234899999999999999998876778999999988643
No 192
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.32 E-value=0.0007 Score=52.71 Aligned_cols=54 Identities=24% Similarity=0.317 Sum_probs=37.0
Q ss_pred hhhHHHHHHHHhhc---CCCcEEEEEECHHHHHHHHHHHhCCc----ccceEEEecccccC
Q 018930 148 EYSKPLLDYLENLL---EDEKVILVGHSSGGACVSYALEHFPQ----KISKAIFLCATMVS 201 (348)
Q Consensus 148 ~~~~~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~ 201 (348)
.....+...++... ...+++++|||+||.+|..++..... .+..++.++++...
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 34444444454432 23499999999999999999887654 56677777776543
No 193
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.10 E-value=0.0012 Score=50.36 Aligned_cols=37 Identities=27% Similarity=0.431 Sum_probs=27.5
Q ss_pred HhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHh
Q 018930 147 AEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
++..+.+.+++++... .++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPD-YSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHh
Confidence 3445566665555554 489999999999999888865
No 194
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.99 E-value=0.0039 Score=56.39 Aligned_cols=118 Identities=23% Similarity=0.217 Sum_probs=70.9
Q ss_pred CCeeeeeeecC---CCCceEEEecCCCCCcc---cHHHHHHHHHhCC-CeEEEeCCC-C-CCCCC---CC----CCCCCC
Q 018930 82 NGKQDTNILEN---IQYKKFVLIHGEGFGAW---CWYKTVASLEEVG-LIPTALDLK-G-SGIDL---SD----TNSVTT 145 (348)
Q Consensus 82 ~g~~~~~~~~~---~~~~~vvllHG~~~~~~---~~~~~~~~L~~~G-~~vi~~D~~-G-~G~S~---~~----~~~~~~ 145 (348)
|...+.++... .+.|++|+|||.+.... ....--..|+++| +-|+++++| | .|.=+ .. ......
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 44444444422 34599999999864332 2112234577777 888888887 2 23211 11 011124
Q ss_pred hHhhh---HHHHHHHHhhcCC-CcEEEEEECHHHHHHHHHHHhCCc---ccceEEEeccccc
Q 018930 146 LAEYS---KPLLDYLENLLED-EKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMV 200 (348)
Q Consensus 146 ~~~~~---~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~ 200 (348)
+.|.+ +.+.+-|+++|-+ ++|.|+|+|-||+.++.+.+ .|. .+.++|+.++...
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 44443 4566667777643 58999999999998877765 353 4677777777654
No 195
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.97 E-value=0.00095 Score=59.74 Aligned_cols=84 Identities=25% Similarity=0.356 Sum_probs=56.1
Q ss_pred ccHHHHHHHHHhCCCe------EEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh----hcCCCcEEEEEECHHHHHH
Q 018930 109 WCWYKTVASLEEVGLI------PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN----LLEDEKVILVGHSSGGACV 178 (348)
Q Consensus 109 ~~~~~~~~~L~~~G~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~----l~~~~~v~lvGhS~Gg~~a 178 (348)
+.|..+++.|..-||. -..+|+|=.= . ...-.+++...+...+|. -+.+ |++||+|||||.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~---~---~~e~rd~yl~kLK~~iE~~~~~~G~k-kVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSY---H---NSEERDQYLSKLKKKIETMYKLNGGK-KVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhcc---C---ChhHHHHHHHHHHHHHHHHHHHcCCC-ceEEEecCCccHHH
Confidence 5789999999988887 4557877211 1 111233444444444443 3434 99999999999999
Q ss_pred HHHHHhCCc--------ccceEEEecccc
Q 018930 179 SYALEHFPQ--------KISKAIFLCATM 199 (348)
Q Consensus 179 ~~~a~~~p~--------~v~~lvl~~~~~ 199 (348)
+++...+++ .|++.|-++++.
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCchh
Confidence 999998876 356666666554
No 196
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.96 E-value=0.025 Score=49.61 Aligned_cols=234 Identities=17% Similarity=0.108 Sum_probs=119.2
Q ss_pred CCceEEEecCCCCCcccH-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcC-CCcEEEEEE
Q 018930 94 QYKKFVLIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVILVGH 171 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvGh 171 (348)
+..+||++=||.+..+.| ........+.|+.++.+-.|-+-..-.......++.....-+.+++...+. ..++++--.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 343666666776666655 456777778899999998887654433233444566666777777777662 137888899
Q ss_pred CHHHHHHHHHH----HhC-C---cccceEEEecccccCCCCChhhH--HHHhhcch-hhhhhhhhhhhhcCCCCCCCCch
Q 018930 172 SSGGACVSYAL----EHF-P---QKISKAIFLCATMVSDGQRPFDV--FAEELGSA-ERFMQESQFLIYGNGKDKPPTGF 240 (348)
Q Consensus 172 S~Gg~~a~~~a----~~~-p---~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (348)
|+||...+... .++ | +.+.++++...+........... +....... ..+.+...... ... ....
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~-~~~-~~~~--- 191 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHIT-LLT-MAGN--- 191 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEE-EEE-eeec---
Confidence 99998654443 122 2 24556777665543221100000 00000000 00000000000 000 0000
Q ss_pred hhHHHhhhhhhccCCChHHHHHHHHhcCCCCCCcccccccCCcCccCCcceEEEEeCCCCCCCHHHHHHHHHhC----CC
Q 018930 241 MFEKQQMKGLYFNQSPSKDVALAMASMRPTPLGPIMEKLSLSPEKYGTGRRFFIQTLDDRALSPDVQEKLVREN----PP 316 (348)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~G~~D~~vp~~~~~~~~~~~----~~ 316 (348)
......+...+ .. ........+...+..... ....+.+++++..|.++|....+++.+.. -+
T Consensus 192 ~~~~~~~~~~~-~~------------~~~~r~~~~~~r~~~~~~-~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~ 257 (350)
T KOG2521|consen 192 EGGAYLLGPLA-EK------------ISMSRKYHFLDRYEEQRN-ELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVN 257 (350)
T ss_pred ccchhhhhhhh-hc------------cccccchHHHHHHHhhhh-cccccceeecCCccccccHHHHHHHHHHHHhcCce
Confidence 00000000000 00 000000000000000000 00257899999999999999887775433 34
Q ss_pred CcEEEecCCCCCCCc-cChHHHHHHHHHHhc
Q 018930 317 EGVYKIKGSDHCPFF-SKPQSLHKILVEIAQ 346 (348)
Q Consensus 317 ~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 346 (348)
++.+.+.++-|..++ ..|..+.+...+|++
T Consensus 258 v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~ 288 (350)
T KOG2521|consen 258 VKSVKFKDSEHVAHFRSFPKTYLKKCSEFLR 288 (350)
T ss_pred EEEeeccCccceeeeccCcHHHHHHHHHHHH
Confidence 466667789999877 579999999999885
No 197
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.92 E-value=0.0036 Score=54.94 Aligned_cols=87 Identities=17% Similarity=0.153 Sum_probs=66.1
Q ss_pred CCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh----cCCCcEEEE
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LEDEKVILV 169 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~v~lv 169 (348)
....-||+.|=|+....=..+.++|.++|+.|+.+|-.-|=.| ..+.++.++|+..+++.. +.. ++.|+
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~------~rtPe~~a~Dl~r~i~~y~~~w~~~-~~~li 331 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWS------ERTPEQIAADLSRLIRFYARRWGAK-RVLLI 331 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhc------cCCHHHHHHHHHHHHHHHHHhhCcc-eEEEE
Confidence 3456788888777666667889999999999999994322222 347888888888888765 444 99999
Q ss_pred EECHHHHHHHHHHHhCCc
Q 018930 170 GHSSGGACVSYALEHFPQ 187 (348)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~ 187 (348)
|+|+|+-+.-.+..+.|.
T Consensus 332 GySfGADvlP~~~n~L~~ 349 (456)
T COG3946 332 GYSFGADVLPFAYNRLPP 349 (456)
T ss_pred eecccchhhHHHHHhCCH
Confidence 999999987777666554
No 198
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.84 E-value=0.004 Score=59.10 Aligned_cols=119 Identities=20% Similarity=0.161 Sum_probs=64.8
Q ss_pred CCeeeeeeecC--C---CCceEEEecCCCCCcc----cHHHHHHHHHhCCCeEEEeCCC----CCCCCCC-CCC-CCCCh
Q 018930 82 NGKQDTNILEN--I---QYKKFVLIHGEGFGAW----CWYKTVASLEEVGLIPTALDLK----GSGIDLS-DTN-SVTTL 146 (348)
Q Consensus 82 ~g~~~~~~~~~--~---~~~~vvllHG~~~~~~----~~~~~~~~L~~~G~~vi~~D~~----G~G~S~~-~~~-~~~~~ 146 (348)
|-..+.++... . +-|++|+|||.+.... ....-...+...++-||.+.+| |+-.+.. ... ..+.+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhh
Confidence 44555555422 2 3589999999764432 2233334455668999999988 3322211 111 34455
Q ss_pred HhhhHHH---HHHHHhhcC-CCcEEEEEECHHHHHHHHHHHh--CCcccceEEEeccccc
Q 018930 147 AEYSKPL---LDYLENLLE-DEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMV 200 (348)
Q Consensus 147 ~~~~~~l---~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 200 (348)
.|+...| .+-|..+|- .++|+|+|||-||..+...+.. -...+.++|+.++...
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 5655444 444444542 2489999999999977666654 1346999999998543
No 199
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.77 E-value=0.0037 Score=51.74 Aligned_cols=38 Identities=32% Similarity=0.441 Sum_probs=31.2
Q ss_pred CcEEEEEECHHHHHHHHHHHhC----CcccceEEEecccccC
Q 018930 164 EKVILVGHSSGGACVSYALEHF----PQKISKAIFLCATMVS 201 (348)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl~~~~~~~ 201 (348)
+++++.|||.||.+|.+++... .++|.+++..+++...
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 4799999999999999999873 3578898888886543
No 200
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.75 E-value=0.019 Score=51.09 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=29.5
Q ss_pred cEEEEEECHHHHHHHHHHHhCCcccceEEEeccc
Q 018930 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (348)
+++++|+|.||++|..+|.--|..+.+++=-++.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 8999999999999999999999988887754443
No 201
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.57 E-value=0.19 Score=42.43 Aligned_cols=104 Identities=11% Similarity=-0.035 Sum_probs=73.4
Q ss_pred CceEEEecCCCCCcc-cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECH
Q 018930 95 YKKFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (348)
Q Consensus 95 ~~~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (348)
.|.|+++--..++.. ..+..++.|... ..|+..||-.--.-+ -..+.++++++++-+.+.+..+|. .+++++.+.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp-~~~G~FdldDYIdyvie~~~~~Gp--~~hv~aVCQ 178 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVP-LEAGHFDLDDYIDYVIEMINFLGP--DAHVMAVCQ 178 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceee-cccCCccHHHHHHHHHHHHHHhCC--CCcEEEEec
Confidence 456666655544443 556677777774 789999986443322 234667999999999999999996 477888776
Q ss_pred HH-----HHHHHHHHhCCcccceEEEecccccCC
Q 018930 174 GG-----ACVSYALEHFPQKISKAIFLCATMVSD 202 (348)
Q Consensus 174 Gg-----~~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (348)
-+ .+++..+...|..-..+++++++....
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 54 455555556777888999999887543
No 202
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.54 E-value=0.0044 Score=51.75 Aligned_cols=36 Identities=28% Similarity=0.581 Sum_probs=33.3
Q ss_pred CcEEEEEECHHHHHHHHHHHhCCcccceEEEecccc
Q 018930 164 EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
++-.++|||+||.+++.+...+|+.+...++++|..
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 478999999999999999999999999999999864
No 203
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.45 E-value=0.0068 Score=48.98 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=35.8
Q ss_pred CChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 144 TTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 144 ~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
....|..+....+|++.+.+.+++|+|||.|+.++.++...+
T Consensus 75 ~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 346677788888899888777999999999999999998764
No 204
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.43 E-value=0.0074 Score=50.43 Aligned_cols=21 Identities=43% Similarity=0.536 Sum_probs=18.7
Q ss_pred CcEEEEEECHHHHHHHHHHHh
Q 018930 164 EKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
.++++.|||+||.+|..++..
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 489999999999999888765
No 205
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.37 E-value=0.01 Score=58.99 Aligned_cols=100 Identities=10% Similarity=0.094 Sum_probs=72.7
Q ss_pred ecCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEE
Q 018930 90 LENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (348)
Q Consensus 90 ~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (348)
....+.|++.|+|-.-+....+..++..| ..|-||.-....-...++++.+.-...-++++....+..|+
T Consensus 2118 a~~se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~ 2187 (2376)
T KOG1202|consen 2118 AVQSEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLA 2187 (2376)
T ss_pred hhcccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeee
Confidence 34567899999999877776666666554 34555544332333458888888888888888777799999
Q ss_pred EECHHHHHHHHHHHhC--CcccceEEEecccc
Q 018930 170 GHSSGGACVSYALEHF--PQKISKAIFLCATM 199 (348)
Q Consensus 170 GhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 199 (348)
|+|+|+.++..+|... .+....+|++++.+
T Consensus 2188 GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2188 GYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred ccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 9999999999888543 23456699998764
No 206
>PLN02162 triacylglycerol lipase
Probab=96.15 E-value=0.017 Score=52.27 Aligned_cols=35 Identities=34% Similarity=0.307 Sum_probs=25.7
Q ss_pred hhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHH
Q 018930 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (348)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (348)
+..+.+.+++.+.... ++++.|||+||++|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~-kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNL-KYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCc-eEEEEecChHHHHHHHHHH
Confidence 3445555666554443 8999999999999988764
No 207
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.09 E-value=0.027 Score=42.91 Aligned_cols=79 Identities=16% Similarity=0.087 Sum_probs=55.2
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCe-EEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHH
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLI-PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (348)
..||+.-||+..+..+..++ |.++ +. ++++|+..... ..++.. . ..+.||++|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN-~dl~lcYDY~dl~l-------dfDfsA-------------y-~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPEN-HDLLLCYDYQDLNL-------DFDFSA-------------Y-RHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCC-CcEEEEeehhhcCc-------ccchhh-------------h-hhhhhhhhhHH
Confidence 37888899999988877766 4443 54 56788754331 122221 1 36789999999
Q ss_pred HHHHHHHHHhCCcccceEEEeccccc
Q 018930 175 GACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 175 g~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
-.+|-++.+..+ ++..+.+++...
T Consensus 68 VwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCCCC
Confidence 999999998765 777788887643
No 208
>PLN00413 triacylglycerol lipase
Probab=95.97 E-value=0.024 Score=51.43 Aligned_cols=51 Identities=20% Similarity=0.212 Sum_probs=34.8
Q ss_pred hhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHh---C-----CcccceEEEecccc
Q 018930 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH---F-----PQKISKAIFLCATM 199 (348)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~---~-----p~~v~~lvl~~~~~ 199 (348)
+..+.+.++++..... ++++.|||+||++|..+|.. + ..++.+++..+++.
T Consensus 269 ~i~~~Lk~ll~~~p~~-kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPTS-KFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCCC-eEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 4556677777665544 89999999999999988742 1 12344566666543
No 209
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.80 E-value=0.041 Score=50.11 Aligned_cols=108 Identities=11% Similarity=0.097 Sum_probs=70.6
Q ss_pred CCceEEEecCCCCCcccHHHHHHH-------------------HHhCCCeEEEeCC-CCCCCCCC-CCCCCCChHhhhHH
Q 018930 94 QYKKFVLIHGEGFGAWCWYKTVAS-------------------LEEVGLIPTALDL-KGSGIDLS-DTNSVTTLAEYSKP 152 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~~~~~~~-------------------L~~~G~~vi~~D~-~G~G~S~~-~~~~~~~~~~~~~~ 152 (348)
+.|.++.+.|.++++..|..+.+. +... -.++.+|. -|.|.|.. ......++....+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccchh
Confidence 478999999999999988776431 1111 36899994 49999864 33334455555555
Q ss_pred HHHHHHhh--------cCCCcEEEEEECHHHHHHHHHHHhCCc---ccceEEEecccccCC
Q 018930 153 LLDYLENL--------LEDEKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMVSD 202 (348)
Q Consensus 153 l~~~l~~l--------~~~~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~ 202 (348)
+..+++.+ ....+.+|+|-|+||.-+..+|...-+ ..+++|++.+.....
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlign 239 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGN 239 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecC
Confidence 55555442 122489999999999988777754333 356677666654433
No 210
>PLN02454 triacylglycerol lipase
Probab=95.63 E-value=0.021 Score=51.12 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=23.0
Q ss_pred HHHHHHHHhhcCC-CcEEEEEECHHHHHHHHHHHh
Q 018930 151 KPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 151 ~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
..|..+++..... -++++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444444443322 139999999999999999854
No 211
>PLN02571 triacylglycerol lipase
Probab=95.60 E-value=0.02 Score=51.29 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=28.1
Q ss_pred HhhhHHHHHHHHhhcCC-CcEEEEEECHHHHHHHHHHHh
Q 018930 147 AEYSKPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 147 ~~~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
+++.++|..+++..... -++++.|||+||.+|+.+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45566677777665432 268999999999999998864
No 212
>PLN02310 triacylglycerol lipase
Probab=95.51 E-value=0.039 Score=49.41 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=27.0
Q ss_pred HhhhHHHHHHHHhhc---CCCcEEEEEECHHHHHHHHHHHh
Q 018930 147 AEYSKPLLDYLENLL---EDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 147 ~~~~~~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
++..+.+..+++... ..-++++.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666666542 22379999999999999988853
No 213
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.28 E-value=0.025 Score=50.02 Aligned_cols=89 Identities=19% Similarity=0.266 Sum_probs=53.2
Q ss_pred CCCceEEEecCCCC-CcccHHHHHHHHHhCCCeEEEeCCCCC-CCCCCCCCCCCC-hHhhhHHHHHHHHhhcCCCcEEEE
Q 018930 93 IQYKKFVLIHGEGF-GAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDTNSVTT-LAEYSKPLLDYLENLLEDEKVILV 169 (348)
Q Consensus 93 ~~~~~vvllHG~~~-~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~~~~~-~~~~~~~l~~~l~~l~~~~~v~lv 169 (348)
+.+-.||+.||+-+ +...|...+.....+ +.=..+..+|+ |.......+... -...++++.+.+....++ ++-.|
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~-kISfv 155 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIE-KISFV 155 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccc-eeeee
Confidence 34458999999988 566788777777665 32223333443 222111111111 123445555555555566 99999
Q ss_pred EECHHHHHHHHHHH
Q 018930 170 GHSSGGACVSYALE 183 (348)
Q Consensus 170 GhS~Gg~~a~~~a~ 183 (348)
|||+||.++..+..
T Consensus 156 ghSLGGLvar~AIg 169 (405)
T KOG4372|consen 156 GHSLGGLVARYAIG 169 (405)
T ss_pred eeecCCeeeeEEEE
Confidence 99999998765543
No 214
>PLN02408 phospholipase A1
Probab=95.23 E-value=0.031 Score=49.38 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=26.1
Q ss_pred hhHHHHHHHHhhcCC-CcEEEEEECHHHHHHHHHHHh
Q 018930 149 YSKPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 149 ~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
..+.|..+++..... .++++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 445566666655432 259999999999999988864
No 215
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.14 E-value=0.046 Score=48.09 Aligned_cols=38 Identities=32% Similarity=0.579 Sum_probs=30.5
Q ss_pred cEEEEEECHHHHHHHHHHHhCCcc-----cceEEEecccccCC
Q 018930 165 KVILVGHSSGGACVSYALEHFPQK-----ISKAIFLCATMVSD 202 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~-----v~~lvl~~~~~~~~ 202 (348)
++.|||||+|+.+...++....++ |..+++++++...+
T Consensus 221 pVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 221 PVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred ceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 899999999999988887654443 78899998876543
No 216
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.14 E-value=0.061 Score=42.93 Aligned_cols=77 Identities=17% Similarity=0.210 Sum_probs=43.0
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhh---cCCCcEEEEEECHHHHHHHHHHHh------CCcccceEE
Q 018930 123 LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVILVGHSSGGACVSYALEH------FPQKISKAI 193 (348)
Q Consensus 123 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~~a~~------~p~~v~~lv 193 (348)
..+..+++|-.... .....+...=++.+...++.. ..+.+++|+|+|.|+.++..++.. ..++|.++|
T Consensus 40 ~~~~~V~YpA~~~~---~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avv 116 (179)
T PF01083_consen 40 VAVQGVEYPASLGP---NSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVV 116 (179)
T ss_dssp EEEEE--S---SCG---GSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEE
T ss_pred eEEEecCCCCCCCc---ccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEE
Confidence 44555666643211 111123333344444444432 344599999999999999999876 235788999
Q ss_pred EecccccCC
Q 018930 194 FLCATMVSD 202 (348)
Q Consensus 194 l~~~~~~~~ 202 (348)
+++-+....
T Consensus 117 lfGdP~~~~ 125 (179)
T PF01083_consen 117 LFGDPRRGA 125 (179)
T ss_dssp EES-TTTBT
T ss_pred EecCCcccC
Confidence 988765443
No 217
>PLN02324 triacylglycerol lipase
Probab=94.95 E-value=0.041 Score=49.29 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=25.9
Q ss_pred hhHHHHHHHHhhcCC-CcEEEEEECHHHHHHHHHHHh
Q 018930 149 YSKPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 149 ~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
..+.|..+++..... -.|++.|||+||.+|+.+|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 445566666655421 269999999999999988853
No 218
>PLN02934 triacylglycerol lipase
Probab=94.92 E-value=0.041 Score=50.42 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=27.2
Q ss_pred hhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHH
Q 018930 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (348)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (348)
+....+.+++++.... ++++.|||+||++|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~-kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNA-KFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCC-eEEEeccccHHHHHHHHHH
Confidence 4556666777665544 9999999999999998874
No 219
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.76 E-value=0.18 Score=48.20 Aligned_cols=105 Identities=23% Similarity=0.217 Sum_probs=58.6
Q ss_pred CceEEEecCCCCCccc---H--HHHHHHHHhCCCeEEEeCCC-C---CCCCC-CCCCCCCChHhhhHHHH---HHHHhhc
Q 018930 95 YKKFVLIHGEGFGAWC---W--YKTVASLEEVGLIPTALDLK-G---SGIDL-SDTNSVTTLAEYSKPLL---DYLENLL 161 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~---~--~~~~~~L~~~G~~vi~~D~~-G---~G~S~-~~~~~~~~~~~~~~~l~---~~l~~l~ 161 (348)
-|++|++||.+..... + ......+..+..-|+.+.+| | +.-.. ....+.+.+.|+...+. +-|...+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 5899999998654433 2 11222333334556666666 2 22111 11234455555555444 4444444
Q ss_pred -CCCcEEEEEECHHHHHHHHHHHhC--CcccceEEEecccc
Q 018930 162 -EDEKVILVGHSSGGACVSYALEHF--PQKISKAIFLCATM 199 (348)
Q Consensus 162 -~~~~v~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 199 (348)
..++|+|+|||.||..+..+...- ...+.++|.+++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 235899999999999987776421 13455556665543
No 220
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.61 E-value=0.052 Score=49.89 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=26.9
Q ss_pred hhhHHHHHHHHhhc---CCCcEEEEEECHHHHHHHHHHHh
Q 018930 148 EYSKPLLDYLENLL---EDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 148 ~~~~~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
+..++|..+++... .+-++++.|||+||.+|+.+|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44566667776553 22369999999999999888853
No 221
>PLN02802 triacylglycerol lipase
Probab=94.60 E-value=0.056 Score=49.58 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=26.2
Q ss_pred hhhHHHHHHHHhhcC-CCcEEEEEECHHHHHHHHHHHh
Q 018930 148 EYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 148 ~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
+..++|..+++.... +-+|++.|||+||.+|+.+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344556666665432 1268999999999999988864
No 222
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.59 E-value=0.062 Score=47.74 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=84.6
Q ss_pred eeeeecCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC--CCCChHhhhHHHHHHHHhhcC-
Q 018930 86 DTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN--SVTTLAEYSKPLLDYLENLLE- 162 (348)
Q Consensus 86 ~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~l~~~l~~l~~- 162 (348)
+.+...+...|+|+..-|++.+..-...=...|.+ -+-+.+++|-+|.|.+.+. ...++.+-+.|.+.+++.+..
T Consensus 54 vtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 54 VTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred EEEEEcCCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh
Confidence 44555677889999999998876544322223333 4789999999999964332 446888999999998888752
Q ss_pred -CCcEEEEEECHHHHHHHHHHHhCCcccceEEEecccc
Q 018930 163 -DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 163 -~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
.++.+--|.|=||+.++.+=.-||+-|.+.|.--++.
T Consensus 132 Y~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 132 YPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred ccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 3489999999999999999888999999888765543
No 223
>PLN02753 triacylglycerol lipase
Probab=94.44 E-value=0.061 Score=49.53 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHhhcC----CCcEEEEEECHHHHHHHHHHH
Q 018930 148 EYSKPLLDYLENLLE----DEKVILVGHSSGGACVSYALE 183 (348)
Q Consensus 148 ~~~~~l~~~l~~l~~----~~~v~lvGhS~Gg~~a~~~a~ 183 (348)
+..+.|..+++.... +-+|++.|||+||.+|+.+|.
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 344555666655432 248999999999999999885
No 224
>PLN02761 lipase class 3 family protein
Probab=94.11 E-value=0.078 Score=48.79 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=25.6
Q ss_pred hhhHHHHHHHHhhc-----CCCcEEEEEECHHHHHHHHHHH
Q 018930 148 EYSKPLLDYLENLL-----EDEKVILVGHSSGGACVSYALE 183 (348)
Q Consensus 148 ~~~~~l~~~l~~l~-----~~~~v~lvGhS~Gg~~a~~~a~ 183 (348)
+..+.|..+++... .+-++++.|||+||.+|+.+|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34455666665542 1236999999999999998885
No 225
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.02 E-value=0.11 Score=33.26 Aligned_cols=37 Identities=16% Similarity=0.027 Sum_probs=19.2
Q ss_pred eeeecccCCeeeeeee--cC-------CCCceEEEecCCCCCcccH
Q 018930 75 TLSESLSNGKQDTNIL--EN-------IQYKKFVLIHGEGFGAWCW 111 (348)
Q Consensus 75 ~~~~~~~~g~~~~~~~--~~-------~~~~~vvllHG~~~~~~~~ 111 (348)
.....+.||..+.++. .+ ..+|+|+|.||+.+++..|
T Consensus 14 ~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 14 EHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 3444556776655322 11 3478999999999999988
No 226
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=93.92 E-value=0.086 Score=38.31 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=20.6
Q ss_pred CCeeeeeee---cCCCCceEEEecCCCCCcccHHHHH
Q 018930 82 NGKQDTNIL---ENIQYKKFVLIHGEGFGAWCWYKTV 115 (348)
Q Consensus 82 ~g~~~~~~~---~~~~~~~vvllHG~~~~~~~~~~~~ 115 (348)
+|..+++.. .+.+..+|||+||++++-..|.+++
T Consensus 76 ~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 76 DGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred eeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 587887443 2345669999999999998887764
No 227
>PLN02719 triacylglycerol lipase
Probab=93.83 E-value=0.095 Score=48.15 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=25.2
Q ss_pred hhHHHHHHHHhhcC----CCcEEEEEECHHHHHHHHHHHh
Q 018930 149 YSKPLLDYLENLLE----DEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 149 ~~~~l~~~l~~l~~----~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
..+.|..+++.... .-++++.|||+||.+|+.+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44455555555431 1379999999999999998853
No 228
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=93.75 E-value=0.087 Score=44.86 Aligned_cols=107 Identities=19% Similarity=0.214 Sum_probs=61.6
Q ss_pred CCceEEEecCCCCCcc-cHHHHHHHHHhCC----CeEEEeCCCCCCCC-CCCCCCCCChHhhhHHHHHHHHhh----cCC
Q 018930 94 QYKKFVLIHGEGFGAW-CWYKTVASLEEVG----LIPTALDLKGSGID-LSDTNSVTTLAEYSKPLLDYLENL----LED 163 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~-~~~~~~~~L~~~G----~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~~l~~~l~~l----~~~ 163 (348)
+-|.+++.||-..... .-..+++.|...| --+|.+|.----+- ............++++|.=+++.. ...
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a 176 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSADA 176 (299)
T ss_pred cccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccccC
Confidence 4578999997532111 1223445554433 33555553210000 000111123444555555555552 112
Q ss_pred CcEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 164 EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
..-+|+|-|+||.+++.++..||+++..++..++...
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 3678999999999999999999999999988887653
No 229
>PLN02847 triacylglycerol lipase
Probab=92.91 E-value=0.17 Score=47.31 Aligned_cols=21 Identities=33% Similarity=0.417 Sum_probs=18.0
Q ss_pred CcEEEEEECHHHHHHHHHHHh
Q 018930 164 EKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 389999999999999887754
No 230
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.68 E-value=0.18 Score=44.65 Aligned_cols=37 Identities=27% Similarity=0.287 Sum_probs=30.3
Q ss_pred HhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHh
Q 018930 147 AEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
..+.+++..+++....- ++++-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~-~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNY-SIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCc-EEEEecCChHHHHHHHHHHH
Confidence 56777777777777754 99999999999999888864
No 231
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.51 E-value=8.7 Score=35.46 Aligned_cols=99 Identities=17% Similarity=0.008 Sum_probs=63.7
Q ss_pred CCeeeeeeecCC--CCceEEEecCCCCCcccHHHH--HHHHHhCCCeE-EEeCCCCCCCCCCCCCCCCChHhhhHHHHHH
Q 018930 82 NGKQDTNILENI--QYKKFVLIHGEGFGAWCWYKT--VASLEEVGLIP-TALDLKGSGIDLSDTNSVTTLAEYSKPLLDY 156 (348)
Q Consensus 82 ~g~~~~~~~~~~--~~~~vvllHG~~~~~~~~~~~--~~~L~~~G~~v-i~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 156 (348)
.+..+.|++.++ +.|..|..-|+-. ++-|..+ +..| |... +.-|.|=-|.+-. .....--....+-|.+.
T Consensus 274 ~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFY-lGs~eyE~~I~~~I~~~ 348 (511)
T TIGR03712 274 KRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFY-LGSDEYEQGIINVIQEK 348 (511)
T ss_pred CCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceee-eCcHHHHHHHHHHHHHH
Confidence 345555666444 4678899999866 6655543 3334 4444 4447776665521 11111133456667777
Q ss_pred HHhhcCC-CcEEEEEECHHHHHHHHHHHhC
Q 018930 157 LENLLED-EKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 157 l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
|+.|+.+ +.++|-|-|||..-|+++++..
T Consensus 349 L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 349 LDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 8888864 4799999999999999999864
No 232
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.94 E-value=0.47 Score=36.89 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=32.8
Q ss_pred cEEEEEECHHHHHHHHHHHhCCcccceEEEeccccc
Q 018930 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
..++-|-||||+.|+.+.-++|+...++|.+++...
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 678899999999999999999999999999988643
No 233
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=91.25 E-value=2.4 Score=30.08 Aligned_cols=87 Identities=21% Similarity=0.230 Sum_probs=55.7
Q ss_pred Cccc-HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHH--HHHHHHH
Q 018930 107 GAWC-WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA--CVSYALE 183 (348)
Q Consensus 107 ~~~~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~--~a~~~a~ 183 (348)
+.+. |..+.+.+...||..=.+.++.+|.+-.........+.=...|..+++.+... +++|||=|--.= +-..+|.
T Consensus 8 SPwnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~-kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 8 SPWNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPER-KFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred CHHHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCC-cEEEEeeCCCcCHHHHHHHHH
Confidence 4443 44555666677788777888877655321111111134455677777777765 999999776543 4455678
Q ss_pred hCCcccceEEE
Q 018930 184 HFPQKISKAIF 194 (348)
Q Consensus 184 ~~p~~v~~lvl 194 (348)
++|++|.++.+
T Consensus 87 ~~P~~i~ai~I 97 (100)
T PF09949_consen 87 RFPGRILAIYI 97 (100)
T ss_pred HCCCCEEEEEE
Confidence 89999998754
No 234
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=90.58 E-value=0.49 Score=39.94 Aligned_cols=44 Identities=27% Similarity=0.411 Sum_probs=30.1
Q ss_pred HHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecc
Q 018930 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (348)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (348)
||...+..+-.+.++.|-|||+||.+|..+..++. +-.+.+-+|
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33344444445569999999999999999988764 444444444
No 235
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.58 E-value=0.49 Score=39.94 Aligned_cols=44 Identities=27% Similarity=0.411 Sum_probs=30.1
Q ss_pred HHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecc
Q 018930 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (348)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (348)
||...+..+-.+.++.|-|||+||.+|..+..++. +-.+.+-+|
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33344444445569999999999999999988764 444444444
No 236
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=90.50 E-value=0.53 Score=37.55 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=45.0
Q ss_pred CcceEEEEeCCCCCCCHHHH---HHHHHhCCCC--cEEEecCCCCCCCccCh---HHHHHHHHHHhcC
Q 018930 288 TGRRFFIQTLDDRALSPDVQ---EKLVRENPPE--GVYKIKGSDHCPFFSKP---QSLHKILVEIAQI 347 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~---~~~~~~~~~~--~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~ 347 (348)
+++++.|-|+.|.++.+... ..+...+|.. ..++.+|+||+-.+.-+ +++.-.|.+|+..
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 57899999999999987665 4455555532 56678899999777533 6788888888764
No 237
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.40 E-value=1.4 Score=36.65 Aligned_cols=64 Identities=20% Similarity=0.151 Sum_probs=41.0
Q ss_pred CCeEEEeCCCCC-CC-CC-CCCCCCCChHhhhHHHHHHHHhh-cCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 122 GLIPTALDLKGS-GI-DL-SDTNSVTTLAEYSKPLLDYLENL-LEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 122 G~~vi~~D~~G~-G~-S~-~~~~~~~~~~~~~~~l~~~l~~l-~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
|+.+..+++|.. +- +. .......++.+=++.+.+.+... ..+++++++|+|.|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 567778888761 11 00 11223346666666677766652 2446999999999999998877653
No 238
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.39 E-value=1.3 Score=41.29 Aligned_cols=83 Identities=17% Similarity=0.204 Sum_probs=54.0
Q ss_pred HHHHHhCCCeEEEeCCCCCCCCCC--CCCCCCC-----------hHhhhHHHHHHHHhh---cCCCcEEEEEECHHHHHH
Q 018930 115 VASLEEVGLIPTALDLKGSGIDLS--DTNSVTT-----------LAEYSKPLLDYLENL---LEDEKVILVGHSSGGACV 178 (348)
Q Consensus 115 ~~~L~~~G~~vi~~D~~G~G~S~~--~~~~~~~-----------~~~~~~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a 178 (348)
...+.. ||.++.-|- ||..+.. ......+ +.+.+..-.++++.. .. +.-+..|.|.||.-+
T Consensus 53 ~~~~~~-G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p-~~sY~~GcS~GGRqg 129 (474)
T PF07519_consen 53 ATALAR-GYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAP-KYSYFSGCSTGGRQG 129 (474)
T ss_pred chhhhc-CeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCC-CceEEEEeCCCcchH
Confidence 344544 999999994 6655432 1111122 222222223333332 23 378999999999999
Q ss_pred HHHHHhCCcccceEEEeccccc
Q 018930 179 SYALEHFPQKISKAIFLCATMV 200 (348)
Q Consensus 179 ~~~a~~~p~~v~~lvl~~~~~~ 200 (348)
+..|++||+...++|.-+|+..
T Consensus 130 l~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 130 LMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHhChhhcCeEEeCCchHH
Confidence 9999999999999999888753
No 239
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=90.20 E-value=0.51 Score=41.37 Aligned_cols=54 Identities=15% Similarity=0.206 Sum_probs=41.5
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHhCCCCc-EEEecCCCCCCCccChHHHHHHHHHHh
Q 018930 289 GRRFFIQTLDDRALSPDVQEKLVRENPPEG-VYKIKGSDHCPFFSKPQSLHKILVEIA 345 (348)
Q Consensus 289 ~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~-~~~i~~~gH~~~~e~p~~~~~~i~~fl 345 (348)
+|..++.+..|.+.+++.+....+.+|+.+ +..+|+..|... ++.+...|..|+
T Consensus 330 lpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~fl 384 (507)
T COG4287 330 LPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFL 384 (507)
T ss_pred ccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHH
Confidence 899999999999999999999999999875 556889988864 333444444443
No 240
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.73 E-value=1 Score=42.15 Aligned_cols=56 Identities=30% Similarity=0.396 Sum_probs=35.0
Q ss_pred ChHhhhHHHHHHHHhhcC--CCcEEEEEECHHHHHHHHHHHh-----CCc------ccceEEEeccccc
Q 018930 145 TLAEYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEH-----FPQ------KISKAIFLCATMV 200 (348)
Q Consensus 145 ~~~~~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lvl~~~~~~ 200 (348)
++..-...+.+.+.+.++ +.+++.+||||||.++=.+... .|+ ...++|+++.+..
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 344444445555555433 3589999999999987555432 232 3578888887643
No 241
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.91 E-value=1.2 Score=40.89 Aligned_cols=51 Identities=24% Similarity=0.216 Sum_probs=35.7
Q ss_pred HHHHHHHh--hcCCCcEEEEEECHHHHHHHHHHHhC-----CcccceEEEecccccCCC
Q 018930 152 PLLDYLEN--LLEDEKVILVGHSSGGACVSYALEHF-----PQKISKAIFLCATMVSDG 203 (348)
Q Consensus 152 ~l~~~l~~--l~~~~~v~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~ 203 (348)
.+++.|.. +|.. ||.|||+|+|+-+...+.... -..|..+++++++.....
T Consensus 434 lLAe~L~~r~qG~R-PVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 434 LLAEALCKRSQGNR-PVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred HHHHHHHHhccCCC-ceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 34444433 3555 999999999999988666532 235888999998876653
No 242
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=85.54 E-value=5.7 Score=35.31 Aligned_cols=85 Identities=19% Similarity=0.209 Sum_probs=64.8
Q ss_pred ceEEEecCCCCCcc-------cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEE
Q 018930 96 KKFVLIHGEGFGAW-------CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL 168 (348)
Q Consensus 96 ~~vvllHG~~~~~~-------~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (348)
..||++||-+.++. .|..+++.+.++| -+-.+|...+|.-+ .+++.+..+..+++.. +-.+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~-------GleeDa~~lR~~a~~~----~~~l 239 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFAD-------GLEEDAYALRLFAEVG----PELL 239 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhcc-------chHHHHHHHHHHHHhC----CcEE
Confidence 47999998776554 6999999999985 56678888777532 4788888888877654 3388
Q ss_pred EEECHHHHHHHHHHHhCCcccceEEEecc
Q 018930 169 VGHSSGGACVSYALEHFPQKISKAIFLCA 197 (348)
Q Consensus 169 vGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (348)
|..|+.=..++ |.+||-++.+++.
T Consensus 240 va~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 240 VASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred EEehhhhhhhh-----hhhccceeEEEeC
Confidence 99998766655 6789999998865
No 243
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=84.76 E-value=1.6 Score=37.69 Aligned_cols=105 Identities=12% Similarity=0.087 Sum_probs=70.4
Q ss_pred CCCceEEEecCCCCCcc----cHHHHHH-----------HHHhCCCeEEEeCCC-CCCCCCCCCCC--CCChHhhhHHHH
Q 018930 93 IQYKKFVLIHGEGFGAW----CWYKTVA-----------SLEEVGLIPTALDLK-GSGIDLSDTNS--VTTLAEYSKPLL 154 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~----~~~~~~~-----------~L~~~G~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~~~l~ 154 (348)
...|..+.+.|.++.+. .|..+-+ .|.. -.++.+|-| |.|.|-.+... ..+..+.+.|+.
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~ 106 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLV 106 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHH
Confidence 34677888888776655 2333221 2333 578889987 89988443333 346778999999
Q ss_pred HHHHhhcC------CCcEEEEEECHHHHHHHHHHHhCCc---------ccceEEEecccc
Q 018930 155 DYLENLLE------DEKVILVGHSSGGACVSYALEHFPQ---------KISKAIFLCATM 199 (348)
Q Consensus 155 ~~l~~l~~------~~~v~lvGhS~Gg~~a~~~a~~~p~---------~v~~lvl~~~~~ 199 (348)
++++.+-. ..+++|+..|+||-+|..++...-+ .+.+++|=++..
T Consensus 107 ~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 107 ELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred HHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 99988521 2489999999999999888765322 345666666554
No 244
>PRK12467 peptide synthase; Provisional
Probab=83.79 E-value=6.7 Score=46.96 Aligned_cols=100 Identities=16% Similarity=0.002 Sum_probs=71.9
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHH
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (348)
.+.+++.|...+....+..+...|.. +..++.+..++.-... ....+++..+....+++.......+..+.|+|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~---~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDG---WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCC-CCcEEEEecccccccc---CCccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 35699999999888888888888866 4788888876653221 1334677777777777776655458999999999
Q ss_pred HHHHHHHHHh---CCcccceEEEeccc
Q 018930 175 GACVSYALEH---FPQKISKAIFLCAT 198 (348)
Q Consensus 175 g~~a~~~a~~---~p~~v~~lvl~~~~ 198 (348)
|.++..++.. ..+.+..+.+++..
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEecc
Confidence 9999888753 34556666565443
No 245
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=82.00 E-value=7 Score=31.87 Aligned_cols=73 Identities=14% Similarity=0.115 Sum_probs=51.0
Q ss_pred HHHHHHHhCCC-eEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECH----HHHHHHHHHHhCC-
Q 018930 113 KTVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS----GGACVSYALEHFP- 186 (348)
Q Consensus 113 ~~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~----Gg~~a~~~a~~~p- 186 (348)
...+.+...|. +|+..|.++. ..++.+.+++.+.+++++.+ . .++|+|||. |..++..+|.+..
T Consensus 67 ~~~~~l~~~G~d~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~~-p-~lVL~~~t~~~~~grdlaprlAarLga 136 (202)
T cd01714 67 EALREALAMGADRAILVSDRAF--------AGADTLATAKALAAAIKKIG-V-DLILTGKQSIDGDTGQVGPLLAELLGW 136 (202)
T ss_pred HHHHHHHHcCCCEEEEEecccc--------cCCChHHHHHHHHHHHHHhC-C-CEEEEcCCcccCCcCcHHHHHHHHhCC
Confidence 34444555565 6888876543 33688999999999998877 3 899999999 7788888887642
Q ss_pred cccceEEEe
Q 018930 187 QKISKAIFL 195 (348)
Q Consensus 187 ~~v~~lvl~ 195 (348)
..+..++-+
T Consensus 137 ~lvsdv~~l 145 (202)
T cd01714 137 PQITYVSKI 145 (202)
T ss_pred CccceEEEE
Confidence 234444443
No 246
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=79.23 E-value=14 Score=35.00 Aligned_cols=98 Identities=19% Similarity=0.124 Sum_probs=52.6
Q ss_pred CceEEEecCCCCCccc------H-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHH---HhhcC-C
Q 018930 95 YKKFVLIHGEGFGAWC------W-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL---ENLLE-D 163 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~------~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l---~~l~~-~ 163 (348)
.-.||-+||.|.-+.. | +.|+..| |..|+.+|+-=--+.+ ...-+++.--...-+| ..+|. .
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP----FPRaleEv~fAYcW~inn~allG~Tg 468 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP----FPRALEEVFFAYCWAINNCALLGSTG 468 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC----CCcHHHHHHHHHHHHhcCHHHhCccc
Confidence 3368888998754332 2 2344433 7899999974222211 1122333222222222 22442 3
Q ss_pred CcEEEEEECHHHHHH----HHHHHhCCcccceEEEecccc
Q 018930 164 EKVILVGHSSGGACV----SYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 164 ~~v~lvGhS~Gg~~a----~~~a~~~p~~v~~lvl~~~~~ 199 (348)
++|+++|-|-||.+. +.+++..=..-.++++.-++.
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 799999999999854 444432222235777765543
No 247
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=77.68 E-value=23 Score=28.15 Aligned_cols=37 Identities=16% Similarity=-0.065 Sum_probs=30.8
Q ss_pred CCCceEEEecCCCCCcccH--HHHHHHHHhCCCeEEEeC
Q 018930 93 IQYKKFVLIHGEGFGAWCW--YKTVASLEEVGLIPTALD 129 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~--~~~~~~L~~~G~~vi~~D 129 (348)
+.++.+|++-|+.++...- ..+.+.|.+.|++++..|
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 4567899999998888753 456778999999999999
No 248
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=75.90 E-value=28 Score=31.60 Aligned_cols=99 Identities=17% Similarity=0.168 Sum_probs=65.4
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC----------------------CCCChHhhhHHH
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN----------------------SVTTLAEYSKPL 153 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~----------------------~~~~~~~~~~~l 153 (348)
|+|+++--+..-...+..+.+.+.+.|..|+.+|.-=.|.+....+ ....++.+++-+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 4566665555555678888889999999999999654444322110 011233444455
Q ss_pred HHHHHhhc----CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEe
Q 018930 154 LDYLENLL----EDEKVILVGHSSGGACVSYALEHFPQKISKAIFL 195 (348)
Q Consensus 154 ~~~l~~l~----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 195 (348)
..++..+. ++ -++-+|-|.|..++..+....|=-+-+++..
T Consensus 82 ~~~v~~l~~~g~i~-Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 82 ARFVSDLYDEGKID-GVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHhcCCcc-EEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 55555543 34 6888999999999999999888666666643
No 249
>PRK02399 hypothetical protein; Provisional
Probab=75.22 E-value=42 Score=30.48 Aligned_cols=99 Identities=18% Similarity=0.184 Sum_probs=61.8
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC----------------------CCCCChHhhhHHH
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT----------------------NSVTTLAEYSKPL 153 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~----------------------~~~~~~~~~~~~l 153 (348)
+.|+++--+..-...+..+.+.+.+.|..|+.+|.-..|....+. +....++.+++-.
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 444444444444456777777888889999999985444221110 0111223444555
Q ss_pred HHHHHhh----cCCCcEEEEEECHHHHHHHHHHHhCCcccceEEEe
Q 018930 154 LDYLENL----LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFL 195 (348)
Q Consensus 154 ~~~l~~l----~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 195 (348)
..+++.| .++ -++-+|-|.|..++..+....|=-+-++++.
T Consensus 84 ~~~v~~L~~~g~i~-gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 84 AAFVRELYERGDVA-GVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHHHhcCCcc-EEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 5555543 244 6889999999999999998888666666643
No 250
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=72.71 E-value=2.8 Score=36.88 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=25.1
Q ss_pred HHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHh
Q 018930 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
.+.++++..|+. +-.++|||+|=+.|+.++..
T Consensus 73 al~~~l~~~Gi~-P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 73 ALARLLRSWGIK-PDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHHTTHC-ESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhhcccccc-cceeeccchhhHHHHHHCCc
Confidence 445666777886 88999999999988877643
No 251
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=72.37 E-value=32 Score=29.59 Aligned_cols=40 Identities=13% Similarity=0.143 Sum_probs=27.4
Q ss_pred ChHhhhHHHHH-HHHhhcCCCcEEEEEECHHHHHHHHHHHh
Q 018930 145 TLAEYSKPLLD-YLENLLEDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 145 ~~~~~~~~l~~-~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
.+++-+..... +.+....+.++.++|.|-|++.|-.+|..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 34444443333 33555555689999999999999988864
No 252
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=72.09 E-value=24 Score=26.29 Aligned_cols=62 Identities=13% Similarity=0.104 Sum_probs=37.4
Q ss_pred CCCCceEEEecCCCCCcccHH--HHHHHHHhCCCe---EEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh
Q 018930 92 NIQYKKFVLIHGEGFGAWCWY--KTVASLEEVGLI---PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~~~--~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (348)
++++|.|+-+||+.|....|- -+++.|-..|.. |..+.-. ..-+....++++-++|..+|..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~------~hFP~~~~v~~Yk~~L~~~I~~ 115 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIAT------HHFPHNSNVDEYKEQLKSWIRG 115 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeeccc------ccCCCchHHHHHHHHHHHHHHH
Confidence 356788899999999999874 355665555532 2222211 1111223677777777777755
No 253
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=71.90 E-value=5.6 Score=37.20 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=43.5
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHh----CCC--------CcEEEecCCCCCCCcc--ChHHHHHHHHHHhcC
Q 018930 289 GRRFFIQTLDDRALSPDVQEKLVRE----NPP--------EGVYKIKGSDHCPFFS--KPQSLHKILVEIAQI 347 (348)
Q Consensus 289 ~Pvl~i~G~~D~~vp~~~~~~~~~~----~~~--------~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~ 347 (348)
-.+++.||..|.++|+.....+.++ ... .+++.+||.+|+.--. .+-.....|.+|++.
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 5799999999999998765555443 321 3788899999996543 445677888888863
No 254
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=71.39 E-value=5.2 Score=34.75 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=24.1
Q ss_pred HHHHHHhhcCCCcEEEEEECHHHHHHHHHHH
Q 018930 153 LLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (348)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (348)
+.+++..+++. +-.++|||+|-+.|+.++.
T Consensus 72 ~~~~l~~~Gi~-p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVR-PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCc-ccEEEecCHHHHHHHHHhC
Confidence 44556777886 8899999999998887764
No 255
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=68.29 E-value=25 Score=28.47 Aligned_cols=75 Identities=21% Similarity=0.130 Sum_probs=49.3
Q ss_pred HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCc--c
Q 018930 111 WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ--K 188 (348)
Q Consensus 111 ~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~ 188 (348)
....++.+..+++.++.+|-+|... .-.+..+.+..+++..... .++||=-+..+.-.+..+..+-+ .
T Consensus 72 ~~~~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~~~~-~~~LVlsa~~~~~~~~~~~~~~~~~~ 141 (196)
T PF00448_consen 72 AREALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEALNPD-EVHLVLSATMGQEDLEQALAFYEAFG 141 (196)
T ss_dssp HHHHHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHHSSS-EEEEEEEGGGGGHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhcCCc-cceEEEecccChHHHHHHHHHhhccc
Confidence 4445666777789999999988662 3355667777888887665 67777666666655554443322 3
Q ss_pred cceEEEe
Q 018930 189 ISKAIFL 195 (348)
Q Consensus 189 v~~lvl~ 195 (348)
+.++|+-
T Consensus 142 ~~~lIlT 148 (196)
T PF00448_consen 142 IDGLILT 148 (196)
T ss_dssp TCEEEEE
T ss_pred CceEEEE
Confidence 7788864
No 256
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=68.28 E-value=6.8 Score=34.01 Aligned_cols=31 Identities=19% Similarity=0.125 Sum_probs=24.3
Q ss_pred HHHHHHHhhcCCCcEEEEEECHHHHHHHHHHH
Q 018930 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (348)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (348)
.+.++++..++. +..++|||+|-+.|+.++.
T Consensus 65 al~~~l~~~g~~-P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 65 AAWRALLALLPR-PSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHHhcCCC-CcEEeecCHHHHHHHHHhC
Confidence 345556677885 9999999999988887764
No 257
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=63.99 E-value=8.5 Score=33.22 Aligned_cols=31 Identities=23% Similarity=0.056 Sum_probs=23.6
Q ss_pred HHHHHHhhc-CCCcEEEEEECHHHHHHHHHHHh
Q 018930 153 LLDYLENLL-EDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 153 l~~~l~~l~-~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
+.+.+...+ +. +..++|||+|=+.|+.++..
T Consensus 72 l~~~l~~~g~i~-p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 72 LYLKLKEQGGLK-PDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHHcCCCC-CCEEeecCHHHHHHHHHhCC
Confidence 344555666 76 88999999999988887753
No 258
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=63.91 E-value=47 Score=30.08 Aligned_cols=37 Identities=11% Similarity=0.009 Sum_probs=29.8
Q ss_pred EEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCC
Q 018930 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGID 136 (348)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S 136 (348)
|||+|.... ..|..+++.|.++|+.|.++-..+.+..
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 789988643 4589999999999999999877776553
No 259
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=62.59 E-value=12 Score=32.74 Aligned_cols=63 Identities=17% Similarity=0.049 Sum_probs=39.2
Q ss_pred ccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 109 WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 109 ~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
..|.++...|... -..++++ |=| .---...-+.+.+++.++. .-.++|.|+|+.++..+|..+
T Consensus 2 ~d~~rl~r~l~~~-~~gLvL~--GGG----------~RG~ahiGvL~aLee~gi~-~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 2 SDFSRLARVLTGN-SIALVLG--GGG----------ARGCAHIGVIKALEEAGIP-VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred ChHHHHHHHhcCC-CEEEEEC--ChH----------HHHHHHHHHHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCC
Confidence 3567777777764 2333333 211 1111223445566666776 778999999999999999764
No 260
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=62.02 E-value=55 Score=28.28 Aligned_cols=55 Identities=24% Similarity=0.314 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCe--EEEeCCCCCCCCCCCCCCCCChHhhhH---HHHHHHHhhcCCCcEEEEEECHHHHHH
Q 018930 112 YKTVASLEEVGLI--PTALDLKGSGIDLSDTNSVTTLAEYSK---PLLDYLENLLEDEKVILVGHSSGGACV 178 (348)
Q Consensus 112 ~~~~~~L~~~G~~--vi~~D~~G~G~S~~~~~~~~~~~~~~~---~l~~~l~~l~~~~~v~lvGhS~Gg~~a 178 (348)
...++.+.+.|+. =|.+|. |.|.+. +.++-.+ .+..+ ..++ ..+++|+|-=.++.
T Consensus 166 ~~~i~~a~~~GI~~~~IilDP-GiGF~k-------~~~~n~~ll~~l~~l-~~lg---~Pilvg~SRKsfig 225 (282)
T PRK11613 166 IEQIARCEAAGIAKEKLLLDP-GFGFGK-------NLSHNYQLLARLAEF-HHFN---LPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHcCCChhhEEEeC-CCCcCC-------CHHHHHHHHHHHHHH-HhCC---CCEEEEecccHHHH
Confidence 3445566777886 778884 777542 2222222 22222 2333 55899999555443
No 261
>PHA02114 hypothetical protein
Probab=61.47 E-value=14 Score=25.75 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=29.8
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeC
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (348)
.+||+=-.+..+..-|-.++.+|.+.||.|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 3788888888999999999999999999999854
No 262
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=60.64 E-value=24 Score=31.16 Aligned_cols=84 Identities=15% Similarity=0.264 Sum_probs=60.9
Q ss_pred eEEEecCCCCCcc-------cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEE
Q 018930 97 KFVLIHGEGFGAW-------CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (348)
Q Consensus 97 ~vvllHG~~~~~~-------~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (348)
.+|++|+-..+.. .|..+.+.+.++ -.+-.+|....|..+. +++..+..+.-+++. + .-+++
T Consensus 199 s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG------~~d~DA~avR~F~~~-g---~~~~l 267 (427)
T KOG1411|consen 199 SIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASG------DLDKDAQAVRLFVED-G---HEILL 267 (427)
T ss_pred cEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccC------CchhhHHHHHHHHHc-C---CceEe
Confidence 6899997766554 899999888886 4666789888887554 666777777777765 3 33777
Q ss_pred EECHHHHHHHHHHHhCCcccceEEEec
Q 018930 170 GHSSGGACVSYALEHFPQKISKAIFLC 196 (348)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~~v~~lvl~~ 196 (348)
..|+.=.+.+ |.++|.++-.++
T Consensus 268 aQSyAKNMGL-----YgERvGa~svvc 289 (427)
T KOG1411|consen 268 AQSYAKNMGL-----YGERVGALSVVC 289 (427)
T ss_pred ehhhhhhcch-----hhhccceeEEEe
Confidence 8887766655 567788776665
No 263
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=60.02 E-value=1.1e+02 Score=27.97 Aligned_cols=74 Identities=12% Similarity=0.107 Sum_probs=42.9
Q ss_pred CceEEEecCCCCCcc---cHHHHHHHHHhCCCeEEEeCCCCC---CCCCCCCCCCCChHhhhHHHHHHHHhhcCC-CcEE
Q 018930 95 YKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGS---GIDLSDTNSVTTLAEYSKPLLDYLENLLED-EKVI 167 (348)
Q Consensus 95 ~~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~v~ 167 (348)
+.+||+++......+ ....-+..|.+.|+.|+-++ +|+ |.. ......++++.+..+...+...... .++.
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~--g~gr~~~~~~I~~~~~~~~~~~~l~gk~vl 192 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDV--GPGRMAEPEEIVAAAERALSPKDLAGKRVL 192 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCc--CCCCCCCHHHHHHHHHHHhhhcccCCCEEE
Confidence 456777775432222 24566778888898888654 333 322 1233457777777777776432222 2566
Q ss_pred EEEE
Q 018930 168 LVGH 171 (348)
Q Consensus 168 lvGh 171 (348)
+-|-
T Consensus 193 ITgG 196 (399)
T PRK05579 193 ITAG 196 (399)
T ss_pred EeCC
Confidence 6665
No 264
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=60.01 E-value=23 Score=28.83 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=38.7
Q ss_pred CCceEEEecCCCCCccc---HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh
Q 018930 94 QYKKFVLIHGEGFGAWC---WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~---~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (348)
..++++++||.....-. -..+...|.+.|..+...-+||-|.. ........++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~---~~~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHG---FGNPENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSS---TTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCC---CCCchhHHHHHHHHHHHHHH
Confidence 56899999998665443 34577888888877766666654431 11112333556666666654
No 265
>PRK10279 hypothetical protein; Provisional
Probab=59.29 E-value=14 Score=32.24 Aligned_cols=33 Identities=15% Similarity=0.048 Sum_probs=25.7
Q ss_pred HHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCC
Q 018930 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (348)
+.+.+++.++. .-.++|.|+|+.++..+|....
T Consensus 23 VL~aL~E~gi~-~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIE-IDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCC-cCEEEEEcHHHHHHHHHHcCCh
Confidence 44555666776 7799999999999999987543
No 266
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=58.75 E-value=84 Score=24.36 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=48.6
Q ss_pred CceEEEecCCCCCcccHHH-HHHHHHhCCC-eEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 95 YKKFVLIHGEGFGAWCWYK-TVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~-~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
.+..+++=| +...... +.+.|...|. +|+.++.+. ...++.+.+++.+.+++++.+. .++|+|++
T Consensus 33 ~~v~av~~G---~~~~~~~~l~~~l~~~G~d~v~~~~~~~--------~~~~~~~~~a~~l~~~~~~~~~--~lVl~~~t 99 (164)
T PF01012_consen 33 GEVTAVVLG---PAEEAAEALRKALAKYGADKVYHIDDPA--------LAEYDPEAYADALAELIKEEGP--DLVLFGST 99 (164)
T ss_dssp SEEEEEEEE---TCCCHHHHHHHHHHSTTESEEEEEE-GG--------GTTC-HHHHHHHHHHHHHHHT---SEEEEESS
T ss_pred CeEEEEEEe---cchhhHHHHhhhhhhcCCcEEEEecCcc--------ccccCHHHHHHHHHHHHHhcCC--CEEEEcCc
Confidence 355555555 2233333 3444554676 688888543 2335788999999999999764 68888887
Q ss_pred HHH-HHHHHHHHh
Q 018930 173 SGG-ACVSYALEH 184 (348)
Q Consensus 173 ~Gg-~~a~~~a~~ 184 (348)
.-| -++..+|.+
T Consensus 100 ~~g~~la~~lA~~ 112 (164)
T PF01012_consen 100 SFGRDLAPRLAAR 112 (164)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHH
Confidence 554 477777765
No 267
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=58.67 E-value=17 Score=28.57 Aligned_cols=33 Identities=15% Similarity=0.049 Sum_probs=25.2
Q ss_pred HHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCC
Q 018930 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (348)
+.+.+++.++. .-.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~-~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPL-IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCC
Confidence 44455555665 7799999999999999998643
No 268
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=57.70 E-value=7.9 Score=31.11 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=25.3
Q ss_pred ceEEEecC---CCCCcccHHHHHHHHHhCCCeEEEeC
Q 018930 96 KKFVLIHG---EGFGAWCWYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 96 ~~vvllHG---~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (348)
..||++|. ...+......+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 36999994 22334456778899999999998875
No 269
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=57.29 E-value=71 Score=23.11 Aligned_cols=73 Identities=19% Similarity=0.202 Sum_probs=49.6
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhC-CCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHH
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (348)
.||.-|| .-+......++.+... --.+.++++. ...+++++.+.+.+.++.+...+.++++-==+||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4777899 5666677777777765 3477777753 1248899999999999888765466666555555
Q ss_pred HHHHHH
Q 018930 176 ACVSYA 181 (348)
Q Consensus 176 ~~a~~~ 181 (348)
...-.+
T Consensus 70 sp~n~a 75 (116)
T PF03610_consen 70 SPFNEA 75 (116)
T ss_dssp HHHHHH
T ss_pred ccchHH
Confidence 544333
No 270
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=56.95 E-value=18 Score=31.01 Aligned_cols=33 Identities=18% Similarity=0.010 Sum_probs=25.5
Q ss_pred HHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
-+.+.+++.++. .-.++|.|+|+.++..+|...
T Consensus 27 GVL~aLeE~gi~-~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGIP-IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCCC-ccEEEEECHHHHHHHHHHcCC
Confidence 344555666775 668999999999999998763
No 271
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=56.76 E-value=19 Score=28.93 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=23.6
Q ss_pred HHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
+.+.+++.++. .-.++|-|.||.+|..++..+
T Consensus 17 vl~~L~e~~~~-~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGIL-KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCC-cceEEEECHHHHHHHHHHcCC
Confidence 33444455665 568999999999999998753
No 272
>PRK09936 hypothetical protein; Provisional
Probab=55.61 E-value=35 Score=29.40 Aligned_cols=52 Identities=10% Similarity=-0.062 Sum_probs=37.3
Q ss_pred CcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC
Q 018930 107 GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED 163 (348)
Q Consensus 107 ~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (348)
+...|..+...+...|++.+.+-+-++|.|+.. .-+-+...+.+.....|++
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg-----~~~g~La~~l~~A~~~Gl~ 87 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFG-----GQRGWLAKRLAAAQQAGLK 87 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCcc-----cchHHHHHHHHHHHHcCCE
Confidence 345799999999999999999999999987432 1244445555555555553
No 273
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=54.98 E-value=1.3e+02 Score=26.63 Aligned_cols=92 Identities=15% Similarity=0.014 Sum_probs=53.0
Q ss_pred CCCceEEEecCCCCC--ccc---HHHHHHHHHh-CCCeEEEeCCCCCCCCCCCC---------------CCCCChHhhhH
Q 018930 93 IQYKKFVLIHGEGFG--AWC---WYKTVASLEE-VGLIPTALDLKGSGIDLSDT---------------NSVTTLAEYSK 151 (348)
Q Consensus 93 ~~~~~vvllHG~~~~--~~~---~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~---------------~~~~~~~~~~~ 151 (348)
..+..|+|+-|.... ..- --.+...|.. .+-+++++=-+|.|--..+. .-..++...+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 445577888775322 112 2334445555 57788888878888431100 00112222222
Q ss_pred -HHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHh
Q 018930 152 -PLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (348)
Q Consensus 152 -~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (348)
...-++++...+.+|+++|+|-|+++|--+|..
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 223344555666799999999999998777754
No 274
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=54.67 E-value=12 Score=34.63 Aligned_cols=59 Identities=10% Similarity=-0.026 Sum_probs=40.4
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHhC------CCCcEEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 288 TGRRFFIQTLDDRALSPDVQEKLVREN------PPEGVYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~~~~~~~~------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
+.+++...|-.|..+|+-....-.+.. ++..+..+-.+||++.+++|+.....+..|+.
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChHHHHHHHHHHHh
Confidence 456777777788887766543333333 23333334448999999999999999988864
No 275
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=53.89 E-value=16 Score=34.78 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=25.1
Q ss_pred HHHHH-HhhcCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 153 LLDYL-ENLLEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 153 l~~~l-~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
+.+++ +..|+. +-.++|||+|=+.|+.+|.-.
T Consensus 254 La~ll~~~~GI~-Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIK-PDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCC-CCEEeecCHHHHHHHHHhCCC
Confidence 34455 567887 889999999999998888644
No 276
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=53.64 E-value=19 Score=31.47 Aligned_cols=32 Identities=19% Similarity=0.195 Sum_probs=25.0
Q ss_pred HHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
+.+.|+..++. .-++.|-|+|+.++..+|..+
T Consensus 29 Vl~aL~e~gi~-~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIP-IDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCC-ccEEEecCHHHHHHHHHHcCC
Confidence 34555556665 779999999999999999854
No 277
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=53.54 E-value=14 Score=30.74 Aligned_cols=35 Identities=26% Similarity=0.237 Sum_probs=27.6
Q ss_pred CceEEEecCC-CCCcccHHHHHHHHHhCCCeEEEeC
Q 018930 95 YKKFVLIHGE-GFGAWCWYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 95 ~~~vvllHG~-~~~~~~~~~~~~~L~~~G~~vi~~D 129 (348)
...||++|.. ..+.+....+++.|.++||+++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 3469999974 4455677889999999999998875
No 278
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=53.14 E-value=42 Score=26.39 Aligned_cols=58 Identities=12% Similarity=0.122 Sum_probs=40.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC------CCCChHhhhHHHHHHHHhhcCC
Q 018930 106 FGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN------SVTTLAEYSKPLLDYLENLLED 163 (348)
Q Consensus 106 ~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~l~~~ 163 (348)
-+...|...+..+.+.|++.+.+-.-|++.....+. ......+.++.+.+..++.|++
T Consensus 17 ~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk 80 (166)
T PF14488_consen 17 WTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK 80 (166)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE
Confidence 455689999999999999999998888887542111 1123446667777777777764
No 279
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=52.90 E-value=56 Score=25.39 Aligned_cols=35 Identities=14% Similarity=-0.056 Sum_probs=27.0
Q ss_pred CceEEEecCCCCCccc--HHHHHHHHHhCCCeEEEeC
Q 018930 95 YKKFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D 129 (348)
++.||++-|+.++... -..+.+.|.+.|+.++.+|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 3679999999888874 3456778888899999998
No 280
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=52.83 E-value=14 Score=31.60 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=28.3
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeC
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (348)
..||++|-...+......+++.|.++||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3688999776666677889999999999998875
No 281
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=52.52 E-value=26 Score=28.98 Aligned_cols=31 Identities=16% Similarity=0.112 Sum_probs=23.2
Q ss_pred HHHHHhhcCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 154 LDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
.+.+++.++. .-.++|.|.|+.+|..+|...
T Consensus 19 L~aL~e~gi~-~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMGLE-PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcCCC-ceEEEEeCHHHHHHHHHHcCC
Confidence 3444445665 668999999999999998754
No 282
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=52.38 E-value=1.3e+02 Score=27.45 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=51.0
Q ss_pred ceEEEecCCCCCcc---cHHHHHHHHHhCCCeEEEeCCCCC--CCCCCCCCCCCChHhhhHHHHHHHHh---hcCCCcEE
Q 018930 96 KKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGS--GIDLSDTNSVTTLAEYSKPLLDYLEN---LLEDEKVI 167 (348)
Q Consensus 96 ~~vvllHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~~l~~~l~~---l~~~~~v~ 167 (348)
.++|+++-.....+ ....-+..|.+.|+.|+-+..--+ |... .....++++..+.+...+.. +.- .++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g--~g~~~~~~~i~~~v~~~~~~~~~~~~-~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEG--KGRLAEPETIVKAAEREFSPKEDLEG-KRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCccccccccc--CCCCCCHHHHHHHHHHHHhhccccCC-ceEE
Confidence 56777776433332 456677788888888776653222 3321 23345778888877777754 322 2555
Q ss_pred EEEE------------------CHHHHHHHHHHHh
Q 018930 168 LVGH------------------SSGGACVSYALEH 184 (348)
Q Consensus 168 lvGh------------------S~Gg~~a~~~a~~ 184 (348)
+-|- .+|..+|..++.+
T Consensus 190 it~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~ 224 (390)
T TIGR00521 190 ITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR 224 (390)
T ss_pred EecCCccCCCCceeeecCCCcchHHHHHHHHHHHC
Confidence 5555 3556677666654
No 283
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=51.75 E-value=17 Score=32.95 Aligned_cols=56 Identities=16% Similarity=0.139 Sum_probs=38.0
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccC-----hHHHHHHHHHHhc
Q 018930 289 GRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSK-----PQSLHKILVEIAQ 346 (348)
Q Consensus 289 ~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-----p~~~~~~i~~fl~ 346 (348)
-.+|+|+|++|++.-.... +-+...++.+++.||++|...+.. .++....|.+|..
T Consensus 352 ~rmlFVYG~nDPW~A~~f~--l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAEPFR--LGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CeEEEEeCCCCCcccCccc--cCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999998643321 112234678889999999866542 3456677777754
No 284
>PRK14974 cell division protein FtsY; Provisional
Probab=50.54 E-value=98 Score=27.58 Aligned_cols=67 Identities=22% Similarity=0.196 Sum_probs=42.6
Q ss_pred HhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCC--cccceEEEe
Q 018930 119 EEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP--QKISKAIFL 195 (348)
Q Consensus 119 ~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~ 195 (348)
...|+.++.+|-+|... +-..+.+.+..+.+....+ .+++|.-+.-|.-++.-+..+. -.+.++|+-
T Consensus 219 ~~~~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~~pd-~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 219 KARGIDVVLIDTAGRMH---------TDANLMDELKKIVRVTKPD-LVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HhCCCCEEEEECCCccC---------CcHHHHHHHHHHHHhhCCc-eEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 44578899999887653 2234455566666666665 6777777777776666565443 246777764
No 285
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=49.98 E-value=1e+02 Score=27.72 Aligned_cols=76 Identities=17% Similarity=0.062 Sum_probs=46.3
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEE-EEE
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL-VGH 171 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l-vGh 171 (348)
..+.+|++--|...+.+.|...++.+...|-.=+++=.||. |..+.....++ ....+..+-+..+. +|++ ..|
T Consensus 223 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~--s~yp~~~~~~l--dl~~i~~lk~~~~~--PV~~d~~H 296 (360)
T PRK12595 223 RVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGI--RTYEKATRNTL--DISAVPILKQETHL--PVMVDVTH 296 (360)
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCcc--CCCCCCCCCCc--CHHHHHHHHHHhCC--CEEEeCCC
Confidence 34678999999999999999999999887764344443443 33222212222 22223333333443 6667 799
Q ss_pred CHH
Q 018930 172 SSG 174 (348)
Q Consensus 172 S~G 174 (348)
|.|
T Consensus 297 s~G 299 (360)
T PRK12595 297 STG 299 (360)
T ss_pred CCc
Confidence 988
No 286
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=49.71 E-value=52 Score=25.17 Aligned_cols=79 Identities=10% Similarity=-0.030 Sum_probs=40.2
Q ss_pred cCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCC------------CCCCCChHhhhHHHHHHHHhhcCCCcEEEE
Q 018930 102 HGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSD------------TNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (348)
Q Consensus 102 HG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~------------~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (348)
++.||.......++..|.++|+.|..+-...-+..... .............+..++++...+ ++.
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D---iVh 85 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKPD---IVH 85 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-S---EEE
T ss_pred CCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCCC---eEE
Confidence 34444555678899999999999988854433322111 000111122334555666665543 445
Q ss_pred EECHHHHHHHHHHH
Q 018930 170 GHSSGGACVSYALE 183 (348)
Q Consensus 170 GhS~Gg~~a~~~a~ 183 (348)
.|..........+.
T Consensus 86 ~~~~~~~~~~~~~~ 99 (177)
T PF13439_consen 86 IHGPPAFWIALLAC 99 (177)
T ss_dssp CCTTHCCCHHHHHH
T ss_pred ecccchhHHHHHhc
Confidence 66666554443443
No 287
>PF03283 PAE: Pectinacetylesterase
Probab=49.36 E-value=48 Score=29.86 Aligned_cols=48 Identities=25% Similarity=0.379 Sum_probs=30.5
Q ss_pred HHHHHHh-hcCCCcEEEEEECHHHHHHHHHH----HhCCcccceEEEeccccc
Q 018930 153 LLDYLEN-LLEDEKVILVGHSSGGACVSYAL----EHFPQKISKAIFLCATMV 200 (348)
Q Consensus 153 l~~~l~~-l~~~~~v~lvGhS~Gg~~a~~~a----~~~p~~v~~lvl~~~~~~ 200 (348)
|..++++ +...++++|.|.|-||.-++..+ ..+|..++-..+.++...
T Consensus 144 l~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 144 LDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred HHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 3334444 43335999999999999777654 346655555555566543
No 288
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=47.85 E-value=30 Score=28.45 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=25.2
Q ss_pred HHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCC
Q 018930 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (348)
+.+.|++.++. .-.++|.|.|+.+|..+|...+
T Consensus 16 vl~aL~e~g~~-~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIE-PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCc
Confidence 34445555664 6689999999999999998764
No 289
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=47.34 E-value=1.1e+02 Score=28.31 Aligned_cols=69 Identities=20% Similarity=0.168 Sum_probs=48.0
Q ss_pred HHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcc--cceEEE
Q 018930 117 SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQK--ISKAIF 194 (348)
Q Consensus 117 ~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl 194 (348)
.+...+|.|+.+|-.|.- .--+++.+.+.++-+.+.++ .+.+|--++=|.-|...|..+-+. +.++|+
T Consensus 177 ~ak~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~~P~-E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 177 KAKEEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVINPD-ETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred HHHHcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhcCCC-eEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 344445666666644422 12345667777777778887 899999999999999999887654 677777
Q ss_pred e
Q 018930 195 L 195 (348)
Q Consensus 195 ~ 195 (348)
.
T Consensus 247 T 247 (451)
T COG0541 247 T 247 (451)
T ss_pred E
Confidence 4
No 290
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=47.27 E-value=1.4e+02 Score=24.27 Aligned_cols=90 Identities=10% Similarity=0.123 Sum_probs=47.7
Q ss_pred CceEEEecCCCCCccc------HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEE
Q 018930 95 YKKFVLIHGEGFGAWC------WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL 168 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~------~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (348)
+++|||.|-...+..| +..+.+.+.++|..|+++.. +...+...+.+++.+..+ .++ ++-+
T Consensus 26 k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~----------D~~~~~~~~~~~i~~~~~-~~~--~fpi 92 (203)
T cd03016 26 SWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSV----------DSVESHIKWIEDIEEYTG-VEI--PFPI 92 (203)
T ss_pred CEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEC----------CCHHHHHHHHhhHHHhcC-CCC--ceeE
Confidence 4566767766555554 34556678888999988862 112234445555555443 333 3333
Q ss_pred EEECHHHHHHHHHHHhCC-----cccceEEEeccc
Q 018930 169 VGHSSGGACVSYALEHFP-----QKISKAIFLCAT 198 (348)
Q Consensus 169 vGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~ 198 (348)
..+..+.++-.+....+ .-+.+.+++++.
T Consensus 93 -l~D~~~~ia~~yg~~~~~~~~~~~~r~~fiID~~ 126 (203)
T cd03016 93 -IADPDREVAKLLGMIDPDAGSTLTVRAVFIIDPD 126 (203)
T ss_pred -EECchHHHHHHcCCccccCCCCceeeEEEEECCC
Confidence 33445555555543322 224456667653
No 291
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=47.24 E-value=31 Score=27.18 Aligned_cols=31 Identities=19% Similarity=0.045 Sum_probs=23.3
Q ss_pred HHHHhhcCCCcEEEEEECHHHHHHHHHHHhCC
Q 018930 155 DYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 155 ~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (348)
+.+++.++. .-.++|.|.|+.+|..++...+
T Consensus 20 ~~L~e~g~~-~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIE-IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCC-eeEEEEeCHHHHHHHHHHcCCC
Confidence 334445554 6689999999999999987644
No 292
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=46.48 E-value=54 Score=26.79 Aligned_cols=57 Identities=23% Similarity=0.283 Sum_probs=36.4
Q ss_pred CceEEEecCCCCCcccH---HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh
Q 018930 95 YKKFVLIHGEGFGAWCW---YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~---~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (348)
..+|+++||-....-.+ ....+.|.+.|.+|-.-.++|.|.+ ...+...++.++|++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~--------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE--------ISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC--------CCHHHHHHHHHHHhh
Confidence 56899999987766543 4567788888888888777776643 234555667777654
No 293
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=46.08 E-value=1.6e+02 Score=25.75 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=24.2
Q ss_pred eEEEecCCC--CCcccHHHHHHHHHhCCCeEEEeCCCC
Q 018930 97 KFVLIHGEG--FGAWCWYKTVASLEEVGLIPTALDLKG 132 (348)
Q Consensus 97 ~vvllHG~~--~~~~~~~~~~~~L~~~G~~vi~~D~~G 132 (348)
.+++++|.+ +.......+++.|.+.|+.|..+...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 345556543 333455678899998899998876554
No 294
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=45.52 E-value=1.4e+02 Score=22.90 Aligned_cols=73 Identities=18% Similarity=0.213 Sum_probs=40.4
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccce
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISK 191 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 191 (348)
..+.++|.+.||.|+ |+ |-.+ ....++.+++..+...+..-..+.-|.+.|.-.|-.+ +|.++|. |.+
T Consensus 14 ~~l~~~L~~~g~eV~--D~---G~~~---~~~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~si---aANK~~G-Ira 81 (144)
T TIGR00689 14 SEIIEHLKQKGHEVI--DC---GTLY---DERVDYPDYAKLVADKVVAGEVSLGILICGTGIGMSI---AANKFKG-IRA 81 (144)
T ss_pred HHHHHHHHHCCCEEE--Ec---CCCC---CCCCChHHHHHHHHHHHHcCCCceEEEEcCCcHHHHH---HHhcCCC-eEE
Confidence 357789999999885 43 2111 1224677888888777755433323455555555433 3445554 433
Q ss_pred EEEec
Q 018930 192 AIFLC 196 (348)
Q Consensus 192 lvl~~ 196 (348)
.+..+
T Consensus 82 a~~~d 86 (144)
T TIGR00689 82 ALCVD 86 (144)
T ss_pred EEECC
Confidence 33333
No 295
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=45.04 E-value=62 Score=28.32 Aligned_cols=17 Identities=18% Similarity=0.083 Sum_probs=15.4
Q ss_pred EEEEECHHHHHHHHHHH
Q 018930 167 ILVGHSSGGACVSYALE 183 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~ 183 (348)
.++|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58999999999999885
No 296
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=44.97 E-value=1.2e+02 Score=24.89 Aligned_cols=60 Identities=18% Similarity=0.193 Sum_probs=36.1
Q ss_pred CceEEEecCCCCCcccHHH-HHHHHHhCCC-eEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEE
Q 018930 95 YKKFVLIHGEGFGAWCWYK-TVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~-~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (348)
...|++.||...++..... +-..|.+.|| .|+....-|+- . .+.+.+.++..++. ++.|+
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP----------~----~d~vi~~l~~~~~~-~v~L~ 199 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP----------L----VDTVIEYLRKNGIK-EVHLI 199 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC----------c----HHHHHHHHHHcCCc-eEEEe
Confidence 3478888998877765444 4445667778 55554433322 2 24566667777776 66554
No 297
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=44.86 E-value=96 Score=28.67 Aligned_cols=71 Identities=17% Similarity=0.215 Sum_probs=44.9
Q ss_pred HHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCc--ccceE
Q 018930 115 VASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ--KISKA 192 (348)
Q Consensus 115 ~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~l 192 (348)
++.+...+|.++.+|-+|.-. .-+.+.+.+..+.+..... .++||--++-|.-+...|..+-+ .+.++
T Consensus 175 l~~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~~p~-e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~ 244 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAIQPD-NIIFVMDGSIGQAAEAQAKAFKDSVDVGSV 244 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhcCCc-EEEEEeccccChhHHHHHHHHHhccCCcEE
Confidence 344555689999999998542 2233455566666666655 67777777777666666655533 36677
Q ss_pred EEe
Q 018930 193 IFL 195 (348)
Q Consensus 193 vl~ 195 (348)
|+-
T Consensus 245 IlT 247 (429)
T TIGR01425 245 IIT 247 (429)
T ss_pred EEE
Confidence 763
No 298
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=44.66 E-value=43 Score=26.33 Aligned_cols=31 Identities=23% Similarity=0.170 Sum_probs=22.9
Q ss_pred HHHHHhhcCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 154 LDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
...|++.+.. .-.++|.|.|+.+|..++...
T Consensus 19 l~~L~~~~~~-~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEAGIP-IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHcCCC-eeEEEEECHHHHHHHHHHcCC
Confidence 3444445554 668999999999999998653
No 299
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=44.40 E-value=1.5e+02 Score=22.89 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=41.8
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccce
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISK 191 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 191 (348)
..+.++|.++||.|+ |+ |. .+ .....++.+++..+...+..-..+.-|.+.|...|-.+ +|.++|. |.+
T Consensus 16 ~~l~~~L~~~g~eV~--D~-G~--~~--~~~~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~si---aANK~~G-IRA 84 (148)
T PRK05571 16 EEIIEHLEELGHEVI--DL-GP--DS--YDASVDYPDYAKKVAEAVVAGEADRGILICGTGIGMSI---AANKVKG-IRA 84 (148)
T ss_pred HHHHHHHHHCCCEEE--Ec-CC--CC--CCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCcHHHHH---HHhcCCC-eEE
Confidence 357789999999885 43 21 11 11124677888887777755433334556666655443 3445554 444
Q ss_pred EEEec
Q 018930 192 AIFLC 196 (348)
Q Consensus 192 lvl~~ 196 (348)
.+..+
T Consensus 85 A~~~d 89 (148)
T PRK05571 85 ALCHD 89 (148)
T ss_pred EEECC
Confidence 44444
No 300
>COG3933 Transcriptional antiterminator [Transcription]
Probab=44.26 E-value=1.6e+02 Score=27.23 Aligned_cols=73 Identities=18% Similarity=0.089 Sum_probs=54.1
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHH
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (348)
-.+||+.||... +.....++..|... --+.++|+| -..++.+..+.+.+.+++.... +=.++=.+||
T Consensus 109 v~vIiiAHG~sT-ASSmaevanrLL~~-~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~~~~-~GlllLVDMG 175 (470)
T COG3933 109 VKVIIIAHGYST-ASSMAEVANRLLGE-EIFIAIDMP----------LDVSPSDVLEKLKEYLKERDYR-SGLLLLVDMG 175 (470)
T ss_pred eeEEEEecCcch-HHHHHHHHHHHhhc-cceeeecCC----------CcCCHHHHHHHHHHHHHhcCcc-CceEEEEecc
Confidence 358999999754 45566777777775 578999987 2348889999999999998776 5456667999
Q ss_pred HHHHHH
Q 018930 175 GACVSY 180 (348)
Q Consensus 175 g~~a~~ 180 (348)
......
T Consensus 176 SL~~f~ 181 (470)
T COG3933 176 SLTSFG 181 (470)
T ss_pred hHHHHH
Confidence 875543
No 301
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=43.23 E-value=1.6e+02 Score=23.24 Aligned_cols=73 Identities=16% Similarity=0.116 Sum_probs=38.8
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccce
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISK 191 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 191 (348)
..+.++|.+.||.|+-+-- +. ....++.+++..+...+..-..+.-|.+.|.-.|-.+ +|.++|. |.+
T Consensus 16 ~~l~~~L~~~G~eV~D~G~--~~------~e~~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~si---aANKv~G-IRA 83 (171)
T PRK08622 16 MAVSDYLKSKGHEVIDVGT--YD------FTRTHYPIFGKKVGEAVASGEADLGVCICGTGVGISN---AVNKVPG-IRS 83 (171)
T ss_pred HHHHHHHHHCCCEEEEcCC--CC------CCCCChHHHHHHHHHHHHcCCCcEEEEEcCCcHHHHH---HHhcCCC-eEE
Confidence 4578899999998853321 11 1124677788877777754333323444444444332 3445554 333
Q ss_pred EEEec
Q 018930 192 AIFLC 196 (348)
Q Consensus 192 lvl~~ 196 (348)
.+..+
T Consensus 84 A~~~d 88 (171)
T PRK08622 84 ALVRD 88 (171)
T ss_pred EEeCC
Confidence 33333
No 302
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=43.14 E-value=42 Score=28.83 Aligned_cols=53 Identities=19% Similarity=0.268 Sum_probs=34.1
Q ss_pred hhHHHHHHHHhhcC--CCcEEEEEECHHHHHHHHHH---HhCCcccceEEEecccccC
Q 018930 149 YSKPLLDYLENLLE--DEKVILVGHSSGGACVSYAL---EHFPQKISKAIFLCATMVS 201 (348)
Q Consensus 149 ~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a---~~~p~~v~~lvl~~~~~~~ 201 (348)
+.+.+.+.+..+.. ..+++|.|-|+|++-+..+. ...-+++.+.++.+++...
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 33444444455532 24899999999988665543 2334579999999886543
No 303
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=43.01 E-value=30 Score=29.55 Aligned_cols=72 Identities=8% Similarity=0.013 Sum_probs=47.9
Q ss_pred CCceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEE
Q 018930 94 QYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (348)
..|+||++.|+.+++. .-..++..|..+|++|.++.-|- .-+..-.-+-.+-.++...+.+.|+=-
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt------------~eE~~~p~lWRfw~~lP~~G~i~IF~R 121 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS------------AEELDHDFLWRIHKALPERGEIGIFNR 121 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcCchHHHHHHhCCCCCeEEEEcC
Confidence 3479999999988776 46788889999999999996441 111111223345566655557877777
Q ss_pred CHHHHH
Q 018930 172 SSGGAC 177 (348)
Q Consensus 172 S~Gg~~ 177 (348)
||=+-+
T Consensus 122 SWY~~v 127 (264)
T TIGR03709 122 SHYEDV 127 (264)
T ss_pred ccccch
Confidence 764443
No 304
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=42.93 E-value=1.2e+02 Score=26.93 Aligned_cols=36 Identities=14% Similarity=0.006 Sum_probs=25.8
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCC
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKG 132 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G 132 (348)
.++...|.+++-..+..++..|.+.|+.|..+-..+
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCC
Confidence 344446677666666789999999999988875543
No 305
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=42.82 E-value=14 Score=28.75 Aligned_cols=51 Identities=24% Similarity=0.205 Sum_probs=26.7
Q ss_pred EEeCCCCCCCC--CCCCCCCCChHhhhHHH----HHHHHhhcC---CCcEEEEEECHHHH
Q 018930 126 TALDLKGSGID--LSDTNSVTTLAEYSKPL----LDYLENLLE---DEKVILVGHSSGGA 176 (348)
Q Consensus 126 i~~D~~G~G~S--~~~~~~~~~~~~~~~~l----~~~l~~l~~---~~~v~lvGhS~Gg~ 176 (348)
+-+-+-|||.. ....-..++..+++..| ..+.+..+. .++|.|+|.|++..
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 33444466654 11222446777777777 444444322 24899999998876
No 306
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=42.81 E-value=2.2e+02 Score=24.48 Aligned_cols=72 Identities=14% Similarity=0.198 Sum_probs=43.1
Q ss_pred HHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEE-EECHHHHHHHHHHHhCC-cccc
Q 018930 114 TVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV-GHSSGGACVSYALEHFP-QKIS 190 (348)
Q Consensus 114 ~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv-GhS~Gg~~a~~~a~~~p-~~v~ 190 (348)
.++.+.+ .++.++.+|.+|....+ .+..+.+.++++..... .++|| .-++++.-+...+..|. -.+.
T Consensus 145 ~l~~l~~~~~~D~ViIDt~Gr~~~~---------~~~l~el~~~~~~~~~~-~~~LVl~a~~~~~d~~~~~~~f~~~~~~ 214 (270)
T PRK06731 145 ALTYFKEEARVDYILIDTAGKNYRA---------SETVEEMIETMGQVEPD-YICLTLSASMKSKDMIEIITNFKDIHID 214 (270)
T ss_pred HHHHHHhcCCCCEEEEECCCCCcCC---------HHHHHHHHHHHhhhCCC-eEEEEEcCccCHHHHHHHHHHhCCCCCC
Confidence 3344443 36899999999875321 23444455566555554 45554 45677777777776653 3467
Q ss_pred eEEEe
Q 018930 191 KAIFL 195 (348)
Q Consensus 191 ~lvl~ 195 (348)
++|+-
T Consensus 215 ~~I~T 219 (270)
T PRK06731 215 GIVFT 219 (270)
T ss_pred EEEEE
Confidence 77763
No 307
>COG0218 Predicted GTPase [General function prediction only]
Probab=42.73 E-value=23 Score=28.69 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=32.4
Q ss_pred cceEEEEeCCCCCCCHHHH---HHHHHhC---CCCc--EEEecCCCCCCCccChHHHHHHHHHHhc
Q 018930 289 GRRFFIQTLDDRALSPDVQ---EKLVREN---PPEG--VYKIKGSDHCPFFSKPQSLHKILVEIAQ 346 (348)
Q Consensus 289 ~Pvl~i~G~~D~~vp~~~~---~~~~~~~---~~~~--~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 346 (348)
+|++++...-|.+-..+.. ..+.+.+ +... ++.++-..... -+++.+.|.+++.
T Consensus 136 i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G----i~~l~~~i~~~~~ 197 (200)
T COG0218 136 IPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG----IDELKAKILEWLK 197 (200)
T ss_pred CCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC----HHHHHHHHHHHhh
Confidence 8999999999998865553 3333332 2323 44444322222 4677777777764
No 308
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=42.67 E-value=1.2e+02 Score=23.09 Aligned_cols=73 Identities=15% Similarity=0.198 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccce
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISK 191 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 191 (348)
..+.++|.+.||.|+=+-.- .....++.+++..+...+..-..+.-|.+.|...|-.+ +|.++|. |.+
T Consensus 15 ~~i~~~L~~~g~eV~D~G~~--------~~~~~dy~~~a~~va~~V~~~~~d~GIliCgtGiG~~i---aANK~~G-IrA 82 (140)
T PF02502_consen 15 EAIKEYLEEKGYEVIDFGTY--------SEDSVDYPDFAEKVAEAVASGEADRGILICGTGIGMSI---AANKVPG-IRA 82 (140)
T ss_dssp HHHHHHHHHTTEEEEEESES--------STST--HHHHHHHHHHHHHTTSSSEEEEEESSSHHHHH---HHHTSTT---E
T ss_pred HHHHHHHHHCCCEEEEeCCC--------CCCCCCHHHHHHHHHHHHHcccCCeEEEEcCCChhhhh---HhhcCCC-EEE
Confidence 35778999999988755321 11245788888888877765544323444454444333 3445664 444
Q ss_pred EEEec
Q 018930 192 AIFLC 196 (348)
Q Consensus 192 lvl~~ 196 (348)
.+..+
T Consensus 83 a~~~d 87 (140)
T PF02502_consen 83 ALCSD 87 (140)
T ss_dssp EE-SS
T ss_pred EeeCC
Confidence 44333
No 309
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=42.20 E-value=1.7e+02 Score=23.11 Aligned_cols=65 Identities=15% Similarity=0.079 Sum_probs=36.1
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCc
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ 187 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~ 187 (348)
..+.++|.++||.|+-+-- .+ ....++.+++..+...+..-..+.-|.+.|.-.|-.+ +|.++|.
T Consensus 16 ~~l~~~L~~~G~eV~D~G~-----~~---~~~~dYpd~a~~va~~V~~g~~~~GIliCGTGiG~si---aANKv~G 80 (171)
T TIGR01119 16 MEVSEFLKSKGYEVLDVGT-----YD---FTRTHYPIFGKKVGEAVVSGEADLGVCICGTGVGINN---AVNKVPG 80 (171)
T ss_pred HHHHHHHHHCCCEEEEeCC-----CC---CCCCChHHHHHHHHHHHHcCCCCEEEEEcCCcHHHHH---HHhcCCC
Confidence 3578899999998864321 11 1123577788877777755333323444444444333 3445554
No 310
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=41.24 E-value=45 Score=32.74 Aligned_cols=79 Identities=10% Similarity=0.025 Sum_probs=48.4
Q ss_pred CCCceEEEecCCCCC----------cccHHHHHHHHHhCCCeEEEeCCC-C--CCCCCCCCC-C----CCChHhhhHHHH
Q 018930 93 IQYKKFVLIHGEGFG----------AWCWYKTVASLEEVGLIPTALDLK-G--SGIDLSDTN-S----VTTLAEYSKPLL 154 (348)
Q Consensus 93 ~~~~~vvllHG~~~~----------~~~~~~~~~~L~~~G~~vi~~D~~-G--~G~S~~~~~-~----~~~~~~~~~~l~ 154 (348)
+++.+|++.|..... .+.|...++.|.++||++|.+|-- . .|....+.. - +....+....+.
T Consensus 46 ~~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~Al 125 (672)
T PRK14581 46 KNTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVY 125 (672)
T ss_pred CCceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHH
Confidence 344577777876543 346888999999999999998722 1 121111111 0 112334556777
Q ss_pred HHHHhhcCCCcEEEEEE
Q 018930 155 DYLENLLEDEKVILVGH 171 (348)
Q Consensus 155 ~~l~~l~~~~~v~lvGh 171 (348)
.+|++.+...-+.++|.
T Consensus 126 PILKkyg~pATfFvVg~ 142 (672)
T PRK14581 126 PLLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHHcCCCEEEEEech
Confidence 88999887655666664
No 311
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=40.43 E-value=2.2e+02 Score=24.45 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=55.4
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEE-EEE
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL-VGH 171 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l-vGh 171 (348)
..+.+|++--|..++.+.|...++.+...|-.=+.+=.+|.- + . ..|...+.--.....+++... -+|++ ..|
T Consensus 132 ~~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~-t-~---~~Y~~~~vdl~~i~~lk~~~~-~pV~~D~sH 205 (266)
T PRK13398 132 KTKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGIR-T-F---ETYTRNTLDLAAVAVIKELSH-LPIIVDPSH 205 (266)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCC-C-C---CCCCHHHHHHHHHHHHHhccC-CCEEEeCCC
Confidence 446789999999999999999999998877644455556631 1 1 112222222222233333322 36777 799
Q ss_pred CHH-----HHHHHHHHHhCCcccceEEEec
Q 018930 172 SSG-----GACVSYALEHFPQKISKAIFLC 196 (348)
Q Consensus 172 S~G-----g~~a~~~a~~~p~~v~~lvl~~ 196 (348)
|.| ..++..+.+ .. +.++++-.
T Consensus 206 s~G~~~~v~~~~~aAva-~G--a~Gl~iE~ 232 (266)
T PRK13398 206 ATGRRELVIPMAKAAIA-AG--ADGLMIEV 232 (266)
T ss_pred cccchhhHHHHHHHHHH-cC--CCEEEEec
Confidence 998 444333333 22 56666543
No 312
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=38.80 E-value=1.8e+02 Score=23.72 Aligned_cols=33 Identities=18% Similarity=0.119 Sum_probs=22.9
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCC
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK 131 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (348)
.+..+-|. +...=+.+...|+++|++|++.|+.
T Consensus 15 k~~~vtGg--~sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 15 KVAAVTGG--SSGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred ceeEEecC--CchHHHHHHHHHHhcCcEEEEeecc
Confidence 34445443 3344467888899999999998764
No 313
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=38.74 E-value=23 Score=32.58 Aligned_cols=25 Identities=24% Similarity=0.359 Sum_probs=20.2
Q ss_pred cEEEEEECHHHHHHHHHHHhCCccc
Q 018930 165 KVILVGHSSGGACVSYALEHFPQKI 189 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v 189 (348)
+-+++|-|.|+.+|..++...++.+
T Consensus 102 p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 102 PRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHH
Confidence 4489999999999999988655543
No 314
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=38.44 E-value=65 Score=26.97 Aligned_cols=38 Identities=21% Similarity=0.156 Sum_probs=27.2
Q ss_pred CCceEEEecCCCCC--cccH-HHHHHHHHhCCCeEEEeCCC
Q 018930 94 QYKKFVLIHGEGFG--AWCW-YKTVASLEEVGLIPTALDLK 131 (348)
Q Consensus 94 ~~~~vvllHG~~~~--~~~~-~~~~~~L~~~G~~vi~~D~~ 131 (348)
++|.|+||+=.... ...| ..+.+.+.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 56789999987743 3333 34556778889999988865
No 315
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=38.44 E-value=84 Score=25.19 Aligned_cols=37 Identities=22% Similarity=0.134 Sum_probs=21.0
Q ss_pred EEEeCCCCCCCCCCCCCCCC--C----hHhhhHHHHHHHHhhcC
Q 018930 125 PTALDLKGSGIDLSDTNSVT--T----LAEYSKPLLDYLENLLE 162 (348)
Q Consensus 125 vi~~D~~G~G~S~~~~~~~~--~----~~~~~~~l~~~l~~l~~ 162 (348)
+|++| ||||..+....... . ..+++..+...|++.+.
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA 44 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 67777 89998764322211 1 12455566666666653
No 316
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=38.30 E-value=1.8e+02 Score=22.23 Aligned_cols=73 Identities=19% Similarity=0.139 Sum_probs=39.6
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccce
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISK 191 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 191 (348)
..+.++|.++||.|+=+- -+. ....++.+++..+...+..-..+.-|.+.|.-.|-.+ +|.++|. |.+
T Consensus 15 ~~l~~~L~~~g~eV~D~G--~~~------~~~~dYpd~a~~va~~V~~~~~~~GIliCGtGiG~si---aANK~~G-Ira 82 (143)
T TIGR01120 15 EEIKAFLVERGVKVIDKG--TWS------SERTDYPHYAKQVALAVAGGEVDGGILICGTGIGMSI---AANKFAG-IRA 82 (143)
T ss_pred HHHHHHHHHCCCEEEEeC--CCC------CCCCCHHHHHHHHHHHHHCCCCceEEEEcCCcHHHHH---HHhcCCC-eEE
Confidence 346789999999885332 111 1124677888887777755333323445555555433 3445554 433
Q ss_pred EEEec
Q 018930 192 AIFLC 196 (348)
Q Consensus 192 lvl~~ 196 (348)
.+..+
T Consensus 83 a~~~d 87 (143)
T TIGR01120 83 ALCSE 87 (143)
T ss_pred EEECC
Confidence 33333
No 317
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=38.23 E-value=79 Score=23.63 Aligned_cols=35 Identities=17% Similarity=0.514 Sum_probs=23.1
Q ss_pred CCceEEEecCCCCCcc-------------cHH-----------HHHHHHHhCCCeEEEe
Q 018930 94 QYKKFVLIHGEGFGAW-------------CWY-----------KTVASLEEVGLIPTAL 128 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~-------------~~~-----------~~~~~L~~~G~~vi~~ 128 (348)
+..++||+||-.-+.. .|. ..+..|.+.|++|+.+
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 3468999999653322 242 2345788889998776
No 318
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=37.57 E-value=1.4e+02 Score=25.83 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=45.9
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCC--------CCC---C--CCC-CCCCChHhhhHHHHHHHHhh
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS--------GID---L--SDT-NSVTTLAEYSKPLLDYLENL 160 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~--------G~S---~--~~~-~~~~~~~~~~~~l~~~l~~l 160 (348)
-|-|+|..|.++ .++.|+..||.|+..|+-=- |.. . -++ .-..+.+...+.+.+.++..
T Consensus 252 vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDF 324 (359)
T ss_pred CceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHh
Confidence 378899888754 56788899999999998521 111 0 011 12235667778888888888
Q ss_pred cCCCcEEEEEEC
Q 018930 161 LEDEKVILVGHS 172 (348)
Q Consensus 161 ~~~~~v~lvGhS 172 (348)
|...-|.=.||.
T Consensus 325 G~~ryI~NLGHG 336 (359)
T KOG2872|consen 325 GKSRYIANLGHG 336 (359)
T ss_pred CccceEEecCCC
Confidence 865334445664
No 319
>cd00739 DHPS DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.
Probab=37.53 E-value=2e+02 Score=24.48 Aligned_cols=59 Identities=27% Similarity=0.244 Sum_probs=30.2
Q ss_pred HHHHHHHHHhCCCe--EEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHH
Q 018930 111 WYKTVASLEEVGLI--PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACV 178 (348)
Q Consensus 111 ~~~~~~~L~~~G~~--vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a 178 (348)
+...++.+.+.|+. =+.+|. |.|... +. +..-.+..-++.+...+--+++|+|-=.++.
T Consensus 152 ~~~~i~~~~~~Gi~~~~Ii~DP-g~gf~k-------s~-~~~~~~l~~i~~l~~~~~pil~G~SrkSfig 212 (257)
T cd00739 152 LEARLEAAESAGVARNRIILDP-GIGFGK-------TP-EHNLELLRRLDELKQLGLPVLVGASRKSFIG 212 (257)
T ss_pred HHHHHHHHHHcCCCHHHEEEec-CCCccc-------CH-HHHHHHHHHHHHHHhCCCcEEEEecccHHHH
Confidence 34455667777875 677884 666432 11 1112222222322211245799997655554
No 320
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=36.48 E-value=2.7e+02 Score=23.74 Aligned_cols=84 Identities=14% Similarity=0.056 Sum_probs=46.0
Q ss_pred eEEEecCC--CCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCC-------------CCCChHhhhHHHHHHHHhhc
Q 018930 97 KFVLIHGE--GFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-------------SVTTLAEYSKPLLDYLENLL 161 (348)
Q Consensus 97 ~vvllHG~--~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-------------~~~~~~~~~~~l~~~l~~l~ 161 (348)
.+++.+++ ++.......+++.|.+.|+.|..+............. ...........+..+++...
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKEK 81 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhcC
Confidence 35556665 4444567889999988899998876554333211110 11122334455666666655
Q ss_pred CCCcEEEEEECH-HHHHHHHHHH
Q 018930 162 EDEKVILVGHSS-GGACVSYALE 183 (348)
Q Consensus 162 ~~~~v~lvGhS~-Gg~~a~~~a~ 183 (348)
.+ +++.|+. ...+...+..
T Consensus 82 ~d---ii~~~~~~~~~~~~~~~~ 101 (353)
T cd03811 82 PD---VVISHLTTTPNVLALLAA 101 (353)
T ss_pred CC---EEEEcCccchhHHHHHHh
Confidence 43 5566665 4444444443
No 321
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=36.09 E-value=26 Score=33.42 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=26.4
Q ss_pred EEEEEECHHHHHHHHHHHhCC-cccceEEEecccc
Q 018930 166 VILVGHSSGGACVSYALEHFP-QKISKAIFLCATM 199 (348)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~~ 199 (348)
+|-.+.|-||.-++.+|++.- ..|.+++...|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 566778999999999998643 3588888877754
No 322
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=36.03 E-value=1.7e+02 Score=21.33 Aligned_cols=71 Identities=15% Similarity=0.077 Sum_probs=47.7
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHH
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (348)
.||.-|| .-+......++.+....-.+.++++.- ..+++++.+.+.++++.....+.++++-==+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~----------~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP----------GESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC----------CCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5777798 555666667777765434777777541 2378888899999999886544666555555776
Q ss_pred HHH
Q 018930 177 CVS 179 (348)
Q Consensus 177 ~a~ 179 (348)
...
T Consensus 71 p~n 73 (122)
T cd00006 71 PNN 73 (122)
T ss_pred HHH
Confidence 543
No 323
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=35.86 E-value=76 Score=24.02 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=27.2
Q ss_pred eEEEecCCCCCccc--HHHHHHHHHhCCCeEEEeCCCCCCCCC
Q 018930 97 KFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDLKGSGIDL 137 (348)
Q Consensus 97 ~vvllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G~S~ 137 (348)
++|.+-|.-.+... -..++..|.++|++|.++=.-+||...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 46777777666654 367889999999999977666776554
No 324
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=35.78 E-value=25 Score=31.89 Aligned_cols=37 Identities=14% Similarity=0.017 Sum_probs=26.0
Q ss_pred HHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceE
Q 018930 155 DYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKA 192 (348)
Q Consensus 155 ~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~l 192 (348)
..|...++. +-++.|-|.|+.+|..+|..-++.+..+
T Consensus 103 kaL~e~gl~-p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 103 KALWLRGLL-PRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHcCCC-CceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 344445555 5579999999999999998655444433
No 325
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=35.69 E-value=2e+02 Score=24.48 Aligned_cols=73 Identities=18% Similarity=0.153 Sum_probs=45.5
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCe-EEEeCCCCCCCCCC-C-CCCCCChHhhhHHHHHHHHhhcCCCcEEE-
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLI-PTALDLKGSGIDLS-D-TNSVTTLAEYSKPLLDYLENLLEDEKVIL- 168 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G~G~S~~-~-~~~~~~~~~~~~~l~~~l~~l~~~~~v~l- 168 (348)
..+.+|++--|...+.+.|...++.+...|-. ++... +|. |.. + .....++. .+..+-+..+ -+|++
T Consensus 130 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~-rG~--s~y~~~~~~~~dl~----~i~~lk~~~~--~pV~~d 200 (260)
T TIGR01361 130 KQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCE-RGI--RTFEKATRNTLDLS----AVPVLKKETH--LPIIVD 200 (260)
T ss_pred cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-CCC--CCCCCCCcCCcCHH----HHHHHHHhhC--CCEEEc
Confidence 44678999999999999999999999887764 44443 333 222 1 11122222 2222222234 37788
Q ss_pred EEECHH
Q 018930 169 VGHSSG 174 (348)
Q Consensus 169 vGhS~G 174 (348)
.+||.|
T Consensus 201 s~Hs~G 206 (260)
T TIGR01361 201 PSHAAG 206 (260)
T ss_pred CCCCCC
Confidence 799988
No 326
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=35.67 E-value=23 Score=32.45 Aligned_cols=28 Identities=11% Similarity=0.228 Sum_probs=21.7
Q ss_pred cEEEEEECHHHHHHHHHHHhCCcccceE
Q 018930 165 KVILVGHSSGGACVSYALEHFPQKISKA 192 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~l 192 (348)
+-+++|.|.|+.+|..++...++.+..+
T Consensus 96 p~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 96 PNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 4479999999999999998655555443
No 327
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=35.48 E-value=2.2e+02 Score=24.18 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=33.5
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCC
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS 133 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~ 133 (348)
..+.+|++--|...+.+.|...++.+.+.|-.=+.+=.||.
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 45778999999999999999999999988875555555665
No 328
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=35.40 E-value=1.1e+02 Score=29.85 Aligned_cols=65 Identities=20% Similarity=0.194 Sum_probs=39.6
Q ss_pred CCCCceEEEecCCCCCccc---HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh
Q 018930 92 NIQYKKFVLIHGEGFGAWC---WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~~---~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (348)
+.-..++++|||.....-. -..+...|..+|..|-.+-+|+-|.+-.. .....+....+.+++++
T Consensus 548 ~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~---~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 548 DNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR---PENRVKVLKEILDWFKR 615 (620)
T ss_pred cccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC---chhHHHHHHHHHHHHHH
Confidence 3446689999998655443 34577888888988877777765543221 22344444444455443
No 329
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=35.16 E-value=3.3e+02 Score=24.28 Aligned_cols=93 Identities=14% Similarity=0.005 Sum_probs=58.9
Q ss_pred CCCceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCCh-HhhhHHHHHHHHhhcCCCcEEEE
Q 018930 93 IQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTL-AEYSKPLLDYLENLLEDEKVILV 169 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~l~~~l~~l~~~~~v~lv 169 (348)
.++|.|+++=|..+... .-..++..|.++|++|+..- | + ++ ..-++.|..+-+.++.+ +|
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA----~--------D-TFRAaAiEQL~~w~er~gv~----vI 198 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAA----G--------D-TFRAAAIEQLEVWGERLGVP----VI 198 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEe----c--------c-hHHHHHHHHHHHHHHHhCCe----EE
Confidence 45688888888877776 46789999999999998653 1 1 33 23456666777776653 55
Q ss_pred EECHHHH---HHHHHHHhCCcccceEEEecccccCC
Q 018930 170 GHSSGGA---CVSYALEHFPQKISKAIFLCATMVSD 202 (348)
Q Consensus 170 GhS~Gg~---~a~~~a~~~p~~v~~lvl~~~~~~~~ 202 (348)
.|..|+= ++..+...--.+=.-+|+++++....
T Consensus 199 ~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLh 234 (340)
T COG0552 199 SGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLH 234 (340)
T ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCccccc
Confidence 5557743 44444332223334578888875443
No 330
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=35.12 E-value=50 Score=29.00 Aligned_cols=20 Identities=25% Similarity=0.222 Sum_probs=17.5
Q ss_pred CcEEEEEECHHHHHHHHHHH
Q 018930 164 EKVILVGHSSGGACVSYALE 183 (348)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~ 183 (348)
.+.++.|||+|=+.|+.++.
T Consensus 85 ~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 85 KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCceeecccHhHHHHHHHcc
Confidence 38899999999999888775
No 331
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=35.12 E-value=2.3e+02 Score=22.45 Aligned_cols=73 Identities=21% Similarity=0.166 Sum_probs=38.3
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccce
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISK 191 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 191 (348)
..+.++|.+.||.|+ |+ |. .+ ....++.+++..+...+..-..+.-|.+.|.-.|-.+ +|.++|. |.+
T Consensus 16 ~~l~~~L~~~G~eV~--D~-G~--~~---~~~~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~si---aANK~~G-IRA 83 (171)
T PRK12615 16 MAVSDFLKSKGYDVI--DC-GT--YD---HTRTHYPIFGKKVGEAVVNGQADLGVCICGTGVGINN---AVNKVPG-IRS 83 (171)
T ss_pred HHHHHHHHHCCCEEE--Ec-CC--CC---CCCCChHHHHHHHHHHHHcCCCCEEEEEcCCcHHHHH---HHhcCCC-eEE
Confidence 357789999999885 42 21 11 1123577777777777754333323444444444332 3445554 333
Q ss_pred EEEec
Q 018930 192 AIFLC 196 (348)
Q Consensus 192 lvl~~ 196 (348)
.+..+
T Consensus 84 A~~~d 88 (171)
T PRK12615 84 ALVRD 88 (171)
T ss_pred EEeCC
Confidence 33333
No 332
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=34.81 E-value=41 Score=28.04 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=49.3
Q ss_pred CceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 95 YKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 95 ~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
.|+||++.|+.+++. .-..++..|..+|++|.++.-|- .-+..-.-+-.+-..+...+.+.++=-|
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt------------~eE~~~p~lwRfw~~lP~~G~i~IF~rS 97 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS------------DRERTQWYFQRYVQHLPAAGEIVLFDRS 97 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcChHHHHHHHhCCCCCeEEEEeCc
Confidence 479999999988776 46788889999999999987541 1111222344555667655688888877
Q ss_pred HHHHH
Q 018930 173 SGGAC 177 (348)
Q Consensus 173 ~Gg~~ 177 (348)
|=+-+
T Consensus 98 wY~~~ 102 (230)
T TIGR03707 98 WYNRA 102 (230)
T ss_pred hhhhH
Confidence 75554
No 333
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=34.81 E-value=36 Score=28.96 Aligned_cols=21 Identities=33% Similarity=0.694 Sum_probs=14.5
Q ss_pred HHHhhcCCCcEEEEEECHHHH
Q 018930 156 YLENLLEDEKVILVGHSSGGA 176 (348)
Q Consensus 156 ~l~~l~~~~~v~lvGhS~Gg~ 176 (348)
+++.+.--..|+++|||+|..
T Consensus 227 ~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 227 FFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHhhhcCCCEEEEEeCCCchh
Confidence 334443224999999999976
No 334
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.27 E-value=1.8e+02 Score=27.31 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=47.4
Q ss_pred EecCCCCCcccH-HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHH
Q 018930 100 LIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACV 178 (348)
Q Consensus 100 llHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a 178 (348)
|--|+|.+...- ..-+++-..+||.|+.+|-.|.=.. -.-+...+..+++.-.++ .|+.||.-+=|.=+
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~---------~~~lm~~l~k~~~~~~pd-~i~~vgealvg~ds 512 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN---------NAPLMTSLAKLIKVNKPD-LILFVGEALVGNDS 512 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC---------ChhHHHHHHHHHhcCCCc-eEEEehhhhhCcHH
Confidence 334555554332 2345566677999999998774422 223445666777776776 89999988877766
Q ss_pred HHHHH
Q 018930 179 SYALE 183 (348)
Q Consensus 179 ~~~a~ 183 (348)
+.-+.
T Consensus 513 v~q~~ 517 (587)
T KOG0781|consen 513 VDQLK 517 (587)
T ss_pred HHHHH
Confidence 55544
No 335
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=34.23 E-value=2.3e+02 Score=25.38 Aligned_cols=76 Identities=11% Similarity=-0.075 Sum_probs=46.8
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHH
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (348)
-+++|+|+..+.+....+++.+...+..|-.+-+--.|.+... . .-.+..+.+.++++..++. +.+..|.|.-
T Consensus 259 ey~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~---~-ps~e~i~~f~~~L~~~Gi~---vtvR~~~G~d 331 (345)
T PRK14457 259 EYILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQ---R-PSPKRIQAFQRVLEQRGVA---VSVRASRGLD 331 (345)
T ss_pred EEEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCC---C-CCHHHHHHHHHHHHHCCCe---EEEeCCCCCc
Confidence 3789999999999988888888764334433333222333221 1 2234455566677777764 6788999865
Q ss_pred HHH
Q 018930 177 CVS 179 (348)
Q Consensus 177 ~a~ 179 (348)
+..
T Consensus 332 i~a 334 (345)
T PRK14457 332 ANA 334 (345)
T ss_pred hhh
Confidence 543
No 336
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=34.15 E-value=64 Score=26.66 Aligned_cols=30 Identities=33% Similarity=0.262 Sum_probs=23.3
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCC
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDL 130 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~ 130 (348)
+.=||++|-|-+.. +..|+++||+|+.+|+
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 34588898877755 4558888999999996
No 337
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=33.96 E-value=1.9e+02 Score=23.91 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=28.5
Q ss_pred CCceEEEecCCCCCccc--H-HHHHHHHHhCCCeEEEeCC
Q 018930 94 QYKKFVLIHGEGFGAWC--W-YKTVASLEEVGLIPTALDL 130 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~--~-~~~~~~L~~~G~~vi~~D~ 130 (348)
.++.|.||+-.+.+... | ....+.|.+.|..+..+++
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 36799999988777764 3 4566788888988888875
No 338
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=33.83 E-value=2.2e+02 Score=21.97 Aligned_cols=73 Identities=8% Similarity=0.099 Sum_probs=40.9
Q ss_pred HHHHHHHHh--CCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCccc
Q 018930 112 YKTVASLEE--VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKI 189 (348)
Q Consensus 112 ~~~~~~L~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v 189 (348)
..+.++|.+ .||.|+=+ |-.+ ....++.+++..+...+..-..+.-+.+.|...|-.++ |.++|. |
T Consensus 18 ~~l~~~L~~~~~g~eV~D~-----G~~~---~~~~dYp~~a~~va~~V~~~~~~~GIliCGtGiG~sia---ANK~~G-I 85 (151)
T PTZ00215 18 NEIIDYIKNKGKEYKIEDM-----GTYT---AESVDYPDFAEKVCEEVLKGEADTGILVCGSGIGISIA---ANKVKG-I 85 (151)
T ss_pred HHHHHHHHhccCCCEEEEc-----CCCC---CCCCCHHHHHHHHHHHHhcCCCcEEEEEcCCcHHHHHH---HhcCCC-e
Confidence 357889999 89988643 2111 11246777888777777554333245566666664433 445553 4
Q ss_pred ceEEEec
Q 018930 190 SKAIFLC 196 (348)
Q Consensus 190 ~~lvl~~ 196 (348)
.+.+..+
T Consensus 86 RAa~~~d 92 (151)
T PTZ00215 86 RCALCHD 92 (151)
T ss_pred EEEEECC
Confidence 4333333
No 339
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=33.63 E-value=36 Score=29.90 Aligned_cols=20 Identities=25% Similarity=0.280 Sum_probs=17.2
Q ss_pred EEEEECHHHHHHHHHHHhCC
Q 018930 167 ILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p 186 (348)
.+.|.|.||.+|+.++..++
T Consensus 35 ~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 35 WIAGTSTGGILALALLHGKS 54 (312)
T ss_pred EEEeeChHHHHHHHHHcCCC
Confidence 68999999999999997543
No 340
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=33.62 E-value=1.2e+02 Score=25.22 Aligned_cols=48 Identities=13% Similarity=0.150 Sum_probs=27.1
Q ss_pred HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEE
Q 018930 111 WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (348)
Q Consensus 111 ~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (348)
.+.+++.|.++||+|..+.+.- ..+...+.+.|..+++..+++ .+.++
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~~----------~~~~~s~~~~L~~~~~~~~~~-~~~~~ 98 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELDD----------PENTQSFEDALARALKQHGID-RLHVM 98 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT-----------TT--SSHHHHHHHHHHHH-----EEEE
T ss_pred HHHHHHHHHhCCCEEEEEeCCC----------ccccccHHHHHHHHHHHcCCC-EEEEE
Confidence 4667889999999999998641 112335667777888888776 55544
No 341
>TIGR03586 PseI pseudaminic acid synthase.
Probab=33.50 E-value=2.7e+02 Score=24.76 Aligned_cols=81 Identities=17% Similarity=0.033 Sum_probs=49.2
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCC-eEEEeCCCCCCCCCCC-CCCCCChHhhhHHHHHHHHhhcCCCcEEEEE
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGL-IPTALDLKGSGIDLSD-TNSVTTLAEYSKPLLDYLENLLEDEKVILVG 170 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~-~vi~~D~~G~G~S~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (348)
..+.+|++--|. .+...|...++.+.+.|. .|+.... -|..+ +....++ ..+..+-+..+ -+|.+..
T Consensus 132 ~~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~LlhC----~s~YP~~~~~~nL----~~i~~lk~~f~--~pVG~SD 200 (327)
T TIGR03586 132 KTGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLKC----TSSYPAPLEDANL----RTIPDLAERFN--VPVGLSD 200 (327)
T ss_pred hcCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEec----CCCCCCCcccCCH----HHHHHHHHHhC--CCEEeeC
Confidence 446688899998 588899999999988777 4555542 23221 1111122 22222223343 3787899
Q ss_pred ECHHHHHHHHHHHh
Q 018930 171 HSSGGACVSYALEH 184 (348)
Q Consensus 171 hS~Gg~~a~~~a~~ 184 (348)
|+.|-.+++.+.+.
T Consensus 201 Ht~G~~~~~aAva~ 214 (327)
T TIGR03586 201 HTLGILAPVAAVAL 214 (327)
T ss_pred CCCchHHHHHHHHc
Confidence 99997666555543
No 342
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=33.35 E-value=1.5e+02 Score=23.34 Aligned_cols=54 Identities=20% Similarity=0.291 Sum_probs=34.6
Q ss_pred HHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHH
Q 018930 117 SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (348)
Q Consensus 117 ~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (348)
.|.+.|++.+.+|.=+.=-. +....-..++.+.+.++.+..+.+ ++.+|-.|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~---~~~~~i~~~~~~~~~~l~~~~~~~-~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTP---PYEDEIPPEYAEWLNELKKQFGKD-RVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCC---CCcCcCCHHHHHHHHHHHHHCCCC-eEEEEECCCC
Confidence 48888999999997554211 222223345555555555555544 8999999986
No 343
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=33.02 E-value=1.2e+02 Score=23.79 Aligned_cols=55 Identities=9% Similarity=0.041 Sum_probs=38.7
Q ss_pred eeeecccCCeeeeeeecCCCCceEEEecCCCCCccc------HHHHHHHHHhCCCeEEEeC
Q 018930 75 TLSESLSNGKQDTNILENIQYKKFVLIHGEGFGAWC------WYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 75 ~~~~~~~~g~~~~~~~~~~~~~~vvllHG~~~~~~~------~~~~~~~L~~~G~~vi~~D 129 (348)
.++.+..+|..+.+..-.+++++|+|+--...+..| |+.-.+.+.+.|+.|+.+.
T Consensus 71 D~tL~dedg~sisLkkit~nk~vV~f~YP~asTPGCTkQaCgFRDnY~k~kka~aeV~GlS 131 (211)
T KOG0855|consen 71 DFTLKDEDGKSISLKKITGNKPVVLFFYPAASTPGCTKQACGFRDNYEKFKKAGAEVIGLS 131 (211)
T ss_pred CcccccCCCCeeeeeeecCCCcEEEEEeccCCCCCcccccccccccHHHHhhcCceEEeec
Confidence 345666788888866555566888888655555443 6777788888899998664
No 344
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=32.54 E-value=1.1e+02 Score=26.17 Aligned_cols=38 Identities=16% Similarity=0.096 Sum_probs=24.5
Q ss_pred eEEEecCCCCCccc--HHHHHHHHHhCCCeEEEeCCCCCC
Q 018930 97 KFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDLKGSG 134 (348)
Q Consensus 97 ~vvllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G 134 (348)
++|++-|+++++.. ...+.+.|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 58899999998875 345777888888999998855555
No 345
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=32.45 E-value=92 Score=26.85 Aligned_cols=80 Identities=23% Similarity=0.233 Sum_probs=45.4
Q ss_pred EEEecCCCCCcc-cHHHHHHHHHhCCC-------eEEEeCCCCCCCCCCCCCCCCChHhhh--------HHHHHHHHhhc
Q 018930 98 FVLIHGEGFGAW-CWYKTVASLEEVGL-------IPTALDLKGSGIDLSDTNSVTTLAEYS--------KPLLDYLENLL 161 (348)
Q Consensus 98 vvllHG~~~~~~-~~~~~~~~L~~~G~-------~vi~~D~~G~G~S~~~~~~~~~~~~~~--------~~l~~~l~~l~ 161 (348)
-|++.|.|...- .-..+...+.+.|. +++.+|..|-=..+.+.. ...-..++ .+|.++++..+
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l-~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDL-TPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcc-hHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 345556555444 44555666666677 899999988533322110 00111122 35777777766
Q ss_pred CCCcEEEEEECH-HHHHHHHH
Q 018930 162 EDEKVILVGHSS-GGACVSYA 181 (348)
Q Consensus 162 ~~~~v~lvGhS~-Gg~~a~~~ 181 (348)
. -+|+|-|- ||.+.-.+
T Consensus 106 p---tvlIG~S~~~g~ft~ev 123 (279)
T cd05312 106 P---TVLIGLSGVGGAFTEEV 123 (279)
T ss_pred C---CEEEEeCCCCCCCCHHH
Confidence 4 49999995 67644333
No 346
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=32.32 E-value=2.9e+02 Score=25.69 Aligned_cols=71 Identities=18% Similarity=0.164 Sum_probs=38.0
Q ss_pred HHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCc--ccceE
Q 018930 115 VASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ--KISKA 192 (348)
Q Consensus 115 ~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~l 192 (348)
++.+...+|.++.+|-+|....+ +...+.+..+.+.+... .+++|--++-|.-+...|..+-+ .+.++
T Consensus 175 l~~~~~~~~DvVIIDTaGr~~~d---------~~l~~eL~~i~~~~~p~-e~lLVvda~tgq~~~~~a~~f~~~v~i~gi 244 (428)
T TIGR00959 175 LEYAKENGFDVVIVDTAGRLQID---------EELMEELAAIKEILNPD-EILLVVDAMTGQDAVNTAKTFNERLGLTGV 244 (428)
T ss_pred HHHHHhcCCCEEEEeCCCccccC---------HHHHHHHHHHHHhhCCc-eEEEEEeccchHHHHHHHHHHHhhCCCCEE
Confidence 34454568999999999865321 12334444444444444 55555555545555555444322 35565
Q ss_pred EEe
Q 018930 193 IFL 195 (348)
Q Consensus 193 vl~ 195 (348)
|+-
T Consensus 245 IlT 247 (428)
T TIGR00959 245 VLT 247 (428)
T ss_pred EEe
Confidence 543
No 347
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=32.21 E-value=81 Score=26.33 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=24.4
Q ss_pred HHHHHHHhhcCCC-cEEEEEECHHHHHHHHHHHhCC
Q 018930 152 PLLDYLENLLEDE-KVILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 152 ~l~~~l~~l~~~~-~v~lvGhS~Gg~~a~~~a~~~p 186 (348)
-+.+.+.+.++.. .-.++|-|.|+.++..++...+
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3444555555531 3479999999999999998654
No 348
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=31.97 E-value=35 Score=29.96 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=20.1
Q ss_pred hhcCCCcEEEEEECHHHHHHHHHHHhCC
Q 018930 159 NLLEDEKVILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 159 ~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (348)
..++. +-++.|-|.|+.+|..++...+
T Consensus 92 e~gl~-p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 92 EHQLL-PRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred HcCCC-CCEEEEECHHHHHHHHHHcCCH
Confidence 33444 5579999999999998887543
No 349
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=31.79 E-value=1.5e+02 Score=23.65 Aligned_cols=62 Identities=10% Similarity=0.075 Sum_probs=36.5
Q ss_pred CCceEEEecCCCCC---cccHHHHHHHHHhCCCeEEEeCCCCC---CCCCCCCCCCCChHhhhHHHHHHHH
Q 018930 94 QYKKFVLIHGEGFG---AWCWYKTVASLEEVGLIPTALDLKGS---GIDLSDTNSVTTLAEYSKPLLDYLE 158 (348)
Q Consensus 94 ~~~~vvllHG~~~~---~~~~~~~~~~L~~~G~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~l~~~l~ 158 (348)
.+.+||+++-.... ...+..-+..|.+.|+.|+-+. +|+ |... .....++++.++.+..++.
T Consensus 112 ~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g--~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 112 ATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEG--YGALADIETILETIENTLK 179 (182)
T ss_pred CCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCcc--CCCCCCHHHHHHHHHHHhc
Confidence 35567777753222 2234566788999898888776 444 4322 2333467777766666553
No 350
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=31.75 E-value=1.8e+02 Score=25.14 Aligned_cols=82 Identities=20% Similarity=0.078 Sum_probs=42.0
Q ss_pred HHHhCCCeEE------EeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHh---hcCCCcEEEEEECHHHH----HHHHHHH
Q 018930 117 SLEEVGLIPT------ALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN---LLEDEKVILVGHSSGGA----CVSYALE 183 (348)
Q Consensus 117 ~L~~~G~~vi------~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~---l~~~~~v~lvGhS~Gg~----~a~~~a~ 183 (348)
.|...|++|. .-.++|||...... ...++.+++.+-++. +.. -+.++-|+=-.+. ++-.+.+
T Consensus 23 ~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v----~~~e~l~~~l~~l~~~~~~~~-~davltGYlgs~~qv~~i~~~v~~ 97 (281)
T COG2240 23 PLQRLGLDVWAVPTVQFSNHTGYGKWTGIV----MPPEQLADLLNGLEAIDKLGE-CDAVLTGYLGSAEQVRAIAGIVKA 97 (281)
T ss_pred HHHHcCCceeeeceEEecCCCCCCCCCCcC----CCHHHHHHHHHHHHhcccccc-cCEEEEccCCCHHHHHHHHHHHHH
Confidence 4555677654 45899999754322 333333333333333 222 2677777532222 2222222
Q ss_pred hCCcccceEEEecccccCCC
Q 018930 184 HFPQKISKAIFLCATMVSDG 203 (348)
Q Consensus 184 ~~p~~v~~lvl~~~~~~~~~ 203 (348)
-..+.-+.+++++|.+...+
T Consensus 98 vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 98 VKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred HhccCCCeEEEeCCcccCCC
Confidence 22223457799999876654
No 351
>PRK06849 hypothetical protein; Provisional
Probab=31.63 E-value=3.6e+02 Score=24.41 Aligned_cols=61 Identities=8% Similarity=-0.008 Sum_probs=39.4
Q ss_pred cHHHHHHHHHhCCCeEEEeCCCCCCCCC--C-------CCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 110 CWYKTVASLEEVGLIPTALDLKGSGIDL--S-------DTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 110 ~~~~~~~~L~~~G~~vi~~D~~G~G~S~--~-------~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
.-..++..|.+.|++|++.|......+. . -+....+.+++.+.|.+++++.++ .+++-+.+
T Consensus 16 ~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~i--d~vIP~~e 85 (389)
T PRK06849 16 AALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENI--DLLIPTCE 85 (389)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCC--CEEEECCh
Confidence 4456788899999999999976543221 0 011123556788888888888775 44555544
No 352
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=31.56 E-value=21 Score=29.76 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=40.7
Q ss_pred CceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhh-HHHHHHHHhhcCCCcEEEEEE
Q 018930 95 YKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYS-KPLLDYLENLLEDEKVILVGH 171 (348)
Q Consensus 95 ~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~~l~~~l~~l~~~~~v~lvGh 171 (348)
.|+||++.|+.+++. .-..+...|..+|++|.++.-|. -++.. .-+-.+-.++...+.+.++=-
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~pt-------------~eE~~~p~lwRfw~~lP~~G~I~if~r 96 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKPT-------------DEELRRPFLWRFWRALPARGQIGIFDR 96 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS---------------HHHHTS-TTHHHHTTS--TT-EEEEES
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCCC-------------hhHcCCCcHHHHHHhCCCCCEEEEEec
Confidence 468999999988876 45677778888899999998552 11111 123344555654457777766
Q ss_pred CHHHHH
Q 018930 172 SSGGAC 177 (348)
Q Consensus 172 S~Gg~~ 177 (348)
||=.-+
T Consensus 97 SWY~~~ 102 (228)
T PF03976_consen 97 SWYEDV 102 (228)
T ss_dssp -GGGGG
T ss_pred chhhHH
Confidence 664443
No 353
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=31.07 E-value=2.2e+02 Score=21.70 Aligned_cols=56 Identities=7% Similarity=0.060 Sum_probs=33.9
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHH
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC 177 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 177 (348)
..+.++|.++||.|+ |+ |.. ...++.+++..+.+.+..-..+.-+.+.|.-.|-.+
T Consensus 16 ~~l~~~L~~~G~eV~--D~-G~~-------~~~dYpd~a~~va~~V~~~~~~~GIliCGTGiG~si 71 (142)
T PRK08621 16 EVVKDYLEDNKYEVV--DV-TEE-------GAEDFVDSTLAVAKEVNKSEDNLGIVIDAYGAGSFM 71 (142)
T ss_pred HHHHHHHHHCCCEEE--EC-CCC-------CCCCcHHHHHHHHHHHHcCCCceEEEEcCCChhhhh
Confidence 357889999999986 54 221 124677777777777644333324556666555443
No 354
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=31.07 E-value=75 Score=24.91 Aligned_cols=73 Identities=21% Similarity=0.138 Sum_probs=47.2
Q ss_pred EEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCC-----CCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECH
Q 018930 99 VLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSD-----TNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (348)
Q Consensus 99 vllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~-----~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (348)
|++-|.|++...-..++.+|..+ |.--.+-+|.--.|... -..+|.++.. ....++.++.. -=+|+|.|.
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~-GDvLigIST 118 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQP-GDVLIGIST 118 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCC-CCEEEEEeC
Confidence 56668888998888999888876 66665666555544110 1133444432 34556677765 558999998
Q ss_pred HHH
Q 018930 174 GGA 176 (348)
Q Consensus 174 Gg~ 176 (348)
-|.
T Consensus 119 SGN 121 (176)
T COG0279 119 SGN 121 (176)
T ss_pred CCC
Confidence 886
No 355
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=30.56 E-value=2.4e+02 Score=25.33 Aligned_cols=61 Identities=18% Similarity=-0.005 Sum_probs=37.5
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcC
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE 162 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (348)
..+||.+.|.-.|+ -.+..|.++||.|+.+-+.-+... ........+...|...+.+.+++
T Consensus 4 ~kV~v~mSGGVDSS----VaA~lLk~QGyeViGl~m~~~~~~---~~~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 4 KKVLVGMSGGVDSS----VAAYLLKEQGYEVIGLFMKNWDED---GGGGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred cEEEEEccCCHHHH----HHHHHHHHcCCeEEEEEEEeeccC---CCCcCCchhHHHHHHHHHHHhCC
Confidence 34566666543322 234457778999999988766641 22223455566777777777776
No 356
>COG0337 AroB 3-dehydroquinate synthetase [Amino acid transport and metabolism]
Probab=29.78 E-value=3.9e+02 Score=24.11 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=48.8
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEE-----
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH----- 171 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh----- 171 (348)
.+++++--.........+...|.+.|+.+..+.+|.= ....+++.+ ..+.+.+-..+.+.+-.|+|-
T Consensus 35 k~~ivtd~~v~~~y~~~~~~~l~~~g~~v~~~~lp~G-------E~~Ksl~~~-~~i~~~ll~~~~~R~s~iialGGGvi 106 (360)
T COG0337 35 KVAIVTDETVAPLYLEKLLATLEAAGVEVDSIVLPDG-------EEYKSLETL-EKIYDALLEAGLDRKSTLIALGGGVI 106 (360)
T ss_pred eEEEEECchhHHHHHHHHHHHHHhcCCeeeEEEeCCC-------cccccHHHH-HHHHHHHHHcCCCCCcEEEEECChHH
Confidence 6777776666666667788899999999877777632 233466444 445555555565556666664
Q ss_pred -CHHHHHHHHHH
Q 018930 172 -SSGGACVSYAL 182 (348)
Q Consensus 172 -S~Gg~~a~~~a 182 (348)
+++|++|..+.
T Consensus 107 gDlaGF~Aaty~ 118 (360)
T COG0337 107 GDLAGFAAATYM 118 (360)
T ss_pred HHHHHHHHHHHH
Confidence 34455555443
No 357
>PRK06490 glutamine amidotransferase; Provisional
Probab=29.73 E-value=3.1e+02 Score=22.96 Aligned_cols=84 Identities=14% Similarity=0.172 Sum_probs=44.6
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCC-CC--C--CCC-------CCCCCCCChHhhhHHHHHHHHhhcC
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK-GS--G--IDL-------SDTNSVTTLAEYSKPLLDYLENLLE 162 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~-G~--G--~S~-------~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (348)
...+|+.|--....... .+.|.+.|+.+-.++.. |- . ..+ ..+...++-..+...+.++++..-.
T Consensus 8 ~~vlvi~h~~~~~~g~l---~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~~ 84 (239)
T PRK06490 8 RPVLIVLHQERSTPGRV---GQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPLK 84 (239)
T ss_pred ceEEEEecCCCCCChHH---HHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHHHH
Confidence 34677778765555554 44444556665554321 10 0 000 0111223333456666677765433
Q ss_pred CCcEEEEEECHHHHHHHHHH
Q 018930 163 DEKVILVGHSSGGACVSYAL 182 (348)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a 182 (348)
. ++-++|.++|..+...+.
T Consensus 85 ~-~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 85 E-NKPFLGICLGAQMLARHL 103 (239)
T ss_pred C-CCCEEEECHhHHHHHHHc
Confidence 2 556999999999776664
No 358
>PRK09273 hypothetical protein; Provisional
Probab=29.59 E-value=3.2e+02 Score=22.47 Aligned_cols=78 Identities=12% Similarity=0.092 Sum_probs=42.3
Q ss_pred cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCccc
Q 018930 110 CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKI 189 (348)
Q Consensus 110 ~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v 189 (348)
.+..+.++|.+.||.|+=+-. + +. .....++.+++..+...+..-.. ...+++-..|-.+. .+|.++|. |
T Consensus 18 i~~~L~~~L~~~G~eV~D~G~--~---~~-~~~s~dYpd~a~~vA~~V~~g~~--d~GIliCGTGiG~s-iAANK~pG-I 87 (211)
T PRK09273 18 IYEALKKVADPKGHEVFNYGM--Y---DE-EDHQLTYVQNGIMASILLNSKAV--DFVVTGCGTGQGAM-LALNSFPG-V 87 (211)
T ss_pred HHHHHHHHHHHCCCEEEEeCC--C---CC-CCCCCChHHHHHHHHHHHHcCCC--CEEEEEcCcHHHHH-HHHhcCCC-e
Confidence 577888999999998854331 1 11 11125777888877777755333 33444443433322 33445665 3
Q ss_pred ceEEEecc
Q 018930 190 SKAIFLCA 197 (348)
Q Consensus 190 ~~lvl~~~ 197 (348)
.+.+..++
T Consensus 88 raalc~d~ 95 (211)
T PRK09273 88 VCGYCIDP 95 (211)
T ss_pred EEEEeCCH
Confidence 33333443
No 359
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.27 E-value=94 Score=26.44 Aligned_cols=22 Identities=18% Similarity=0.187 Sum_probs=18.6
Q ss_pred EEEEEECHHHHHHHHHHHhCCc
Q 018930 166 VILVGHSSGGACVSYALEHFPQ 187 (348)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~~~p~ 187 (348)
-.++|.|.|+.++..++.....
T Consensus 29 d~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 29 DLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CEEEEECHHHHhHHHHHhCCcc
Confidence 3899999999999999887543
No 360
>PF10813 DUF2733: Protein of unknown function (DUF2733); InterPro: IPR024360 The UL11 gene product of herpes simplex virus is a membrane-associated tegument protein that is incorporated into the HSV virion and functions in viral envelopment []. UL11 is acylated, which is crucial for lipid raft association [].
Probab=29.22 E-value=25 Score=18.93 Aligned_cols=9 Identities=22% Similarity=0.327 Sum_probs=5.9
Q ss_pred CCCcceecc
Q 018930 1 MGNRFICMN 9 (348)
Q Consensus 1 ~~~~~~~~~ 9 (348)
||++++|-.
T Consensus 1 MG~~~s~Ck 9 (32)
T PF10813_consen 1 MGSLLSMCK 9 (32)
T ss_pred Ccceeeeee
Confidence 777776554
No 361
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=29.13 E-value=2.6e+02 Score=21.31 Aligned_cols=56 Identities=9% Similarity=0.089 Sum_probs=34.5
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHH
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC 177 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 177 (348)
..+.++|.++||.|+ |+ |.+ ...++.+++..+...+..-..+.-+.+.|.-.|-.+
T Consensus 16 ~~i~~~L~~~G~eV~--D~-G~~-------~~~dYpd~a~~va~~V~~~e~~~GIliCGtGiG~si 71 (141)
T TIGR01118 16 DVIKNFLVDNGFEVI--DV-TEG-------DGQDFVDVTLAVASEVQKDEQNLGIVIDAYGAGSFM 71 (141)
T ss_pred HHHHHHHHHCCCEEE--Ec-CCC-------CCCCcHHHHHHHHHHHHcCCCceEEEEcCCCHhHhh
Confidence 357789999999885 43 221 124677788877777755333324566666655443
No 362
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.81 E-value=1e+02 Score=25.46 Aligned_cols=38 Identities=24% Similarity=0.201 Sum_probs=26.9
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCC
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK 131 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (348)
.+.+.+|++-|...+.- =..++.+|.++||.|++--.+
T Consensus 4 ~~~~k~VlItgcs~GGI-G~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGI-GYALAKEFARNGYLVYATARR 41 (289)
T ss_pred ccCCCeEEEeecCCcch-hHHHHHHHHhCCeEEEEEccc
Confidence 34567788887544443 356888899999999986543
No 363
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=28.68 E-value=1.5e+02 Score=22.99 Aligned_cols=56 Identities=20% Similarity=0.251 Sum_probs=34.6
Q ss_pred HHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHH
Q 018930 114 TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYA 181 (348)
Q Consensus 114 ~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~ 181 (348)
+.+.+.. |-.|++.|.+|-- .+-+++++.+..+-+ .| ..=.+++|-|.|=.-++..
T Consensus 60 il~~i~~-~~~vi~Ld~~Gk~---------~sSe~fA~~l~~~~~-~G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 60 ILAAIPK-GSYVVLLDIRGKA---------LSSEEFADFLERLRD-DG-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHhcCC-CCeEEEEecCCCc---------CChHHHHHHHHHHHh-cC-CeEEEEEeCcccCCHHHHH
Confidence 3344444 6789999988633 355566665554433 34 3367889999996555544
No 364
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=28.60 E-value=1.7e+02 Score=25.43 Aligned_cols=14 Identities=21% Similarity=0.097 Sum_probs=8.0
Q ss_pred hhhHHHHHHHHhhc
Q 018930 148 EYSKPLLDYLENLL 161 (348)
Q Consensus 148 ~~~~~l~~~l~~l~ 161 (348)
+.+..+.+.|+..+
T Consensus 86 ~IA~~l~~~L~~~G 99 (287)
T PRK10319 86 AIAKNVRSILRNHG 99 (287)
T ss_pred HHHHHHHHHHHHCC
Confidence 44555666666554
No 365
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.49 E-value=68 Score=23.41 Aligned_cols=23 Identities=22% Similarity=0.226 Sum_probs=19.9
Q ss_pred ccHHHHHHHHHhCCCeEEEeCCC
Q 018930 109 WCWYKTVASLEEVGLIPTALDLK 131 (348)
Q Consensus 109 ~~~~~~~~~L~~~G~~vi~~D~~ 131 (348)
..|..+++.|+++||.|++.|.-
T Consensus 23 G~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 23 GFFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred chHHHHHHHHHHcCCcEEEEecc
Confidence 35778999999999999999964
No 366
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=28.47 E-value=1.3e+02 Score=23.41 Aligned_cols=51 Identities=16% Similarity=0.131 Sum_probs=27.0
Q ss_pred HhhhHHHHHHHHhhc-CCCcEEEEEECHHHHHHHHHHHhCCcccceEEEecc
Q 018930 147 AEYSKPLLDYLENLL-EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (348)
Q Consensus 147 ~~~~~~l~~~l~~l~-~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 197 (348)
++..+.+.++++.+. .+.+|.++|-|..|..-+.++...++.|..++=.++
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 344445555555543 234799999999999999888765666776664443
No 367
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=28.42 E-value=2.2e+02 Score=22.19 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=47.3
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCC-eEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECH-
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS- 173 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~- 173 (348)
...+++-|-... ...+.+...|. +|+.++.+. ...++.+.+++.+.+++++.+. .++|+|+|.
T Consensus 30 ~v~~v~~G~~~~-----~~~~~~~~~Gad~v~~~~~~~--------~~~~~~~~~a~al~~~i~~~~p--~~Vl~~~t~~ 94 (168)
T cd01715 30 EVTALVIGSGAE-----AVAAALKAYGADKVLVAEDPA--------LAHYLAEPYAPALVALAKKEKP--SHILAGATSF 94 (168)
T ss_pred CEEEEEECCChH-----HHHHHHHhcCCCEEEEecChh--------hcccChHHHHHHHHHHHHhcCC--CEEEECCCcc
Confidence 455555554321 12444555565 577776432 2235788999999999988763 777777664
Q ss_pred HHHHHHHHHHhC
Q 018930 174 GGACVSYALEHF 185 (348)
Q Consensus 174 Gg~~a~~~a~~~ 185 (348)
|.-++-++|.+.
T Consensus 95 g~~la~rlAa~L 106 (168)
T cd01715 95 GKDLAPRVAAKL 106 (168)
T ss_pred ccchHHHHHHHh
Confidence 556777777764
No 368
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=27.54 E-value=53 Score=27.32 Aligned_cols=28 Identities=18% Similarity=0.120 Sum_probs=20.4
Q ss_pred EEEecCCCCCcccHHHHHHHHHhCCCeEEEeCC
Q 018930 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDL 130 (348)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~ 130 (348)
=||++|-|-+.. +..|+++||+|+.+|+
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEec
Confidence 567777665543 3347888999999996
No 369
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=27.42 E-value=5e+02 Score=23.98 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=28.9
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCC
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSG 134 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G 134 (348)
..+-|++||.+.... ...+.+.+.+.|..|++-|+..++
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~~ 304 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKVG 304 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEeccccc
Confidence 467999999877665 345556666889999999877554
No 370
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=27.34 E-value=83 Score=27.44 Aligned_cols=25 Identities=16% Similarity=0.303 Sum_probs=19.6
Q ss_pred cEEEEEECHHHHHHHHHHHhCCccc
Q 018930 165 KVILVGHSSGGACVSYALEHFPQKI 189 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v 189 (348)
+-++.|.|.|+.+|..++....+.+
T Consensus 98 ~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 98 PRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred CCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 4479999999999999987644333
No 371
>PRK10867 signal recognition particle protein; Provisional
Probab=27.31 E-value=5.1e+02 Score=24.10 Aligned_cols=69 Identities=17% Similarity=0.143 Sum_probs=35.8
Q ss_pred HHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCc--ccceEE
Q 018930 116 ASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ--KISKAI 193 (348)
Q Consensus 116 ~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~lv 193 (348)
+.....+|.++.+|-+|....+ +...+.+..+.+..... .+++|.-++-|.-+...|..+-+ .+.++|
T Consensus 177 ~~a~~~~~DvVIIDTaGrl~~d---------~~lm~eL~~i~~~v~p~-evllVlda~~gq~av~~a~~F~~~~~i~giI 246 (433)
T PRK10867 177 EEAKENGYDVVIVDTAGRLHID---------EELMDELKAIKAAVNPD-EILLVVDAMTGQDAVNTAKAFNEALGLTGVI 246 (433)
T ss_pred HHHHhcCCCEEEEeCCCCcccC---------HHHHHHHHHHHHhhCCC-eEEEEEecccHHHHHHHHHHHHhhCCCCEEE
Confidence 3444557999999999865321 12333334444444444 45555555544545555544322 245555
Q ss_pred E
Q 018930 194 F 194 (348)
Q Consensus 194 l 194 (348)
+
T Consensus 247 l 247 (433)
T PRK10867 247 L 247 (433)
T ss_pred E
Confidence 5
No 372
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=27.16 E-value=4.4e+02 Score=23.33 Aligned_cols=74 Identities=12% Similarity=0.040 Sum_probs=37.2
Q ss_pred CCceEEEecCCCCCc-ccH---HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEE
Q 018930 94 QYKKFVLIHGEGFGA-WCW---YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL 168 (348)
Q Consensus 94 ~~~~vvllHG~~~~~-~~~---~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (348)
.+..|++++...... ... .-+++.+.+.|-+-+..-.|.+|.+..+......-.--+..+..+|+..+.+ +++.
T Consensus 55 ~g~dV~ii~s~~~~~nd~l~eLll~~~alr~~~a~~i~lViPYl~YaRQDr~~~~ge~isak~~a~lL~~~g~d-~vit 132 (323)
T PRK02458 55 RGDDIYIIQSTSFPVNDHLWELLIMIDACKRASANTVNVVLPYFGYARQDRIAKPREPITAKLVANMLVKAGVD-RVLT 132 (323)
T ss_pred CCCeEEEEecCCCCCchHHHHHHHHHHHHHHcCCceEEEEEeccccchhhcccCCCCCchHHHHHHHHhhcCCC-eEEE
Confidence 345677777654331 222 2345677777766555556666655322211111111345666677766665 4443
No 373
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=27.01 E-value=84 Score=18.87 Aligned_cols=27 Identities=7% Similarity=0.128 Sum_probs=23.1
Q ss_pred CCChHhhhHHHHHHHHhhcCCCcEEEEE
Q 018930 143 VTTLAEYSKPLLDYLENLLEDEKVILVG 170 (348)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (348)
..+.+.|-.|+...|..+.+. .+.++|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~-ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAIT-QLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhcceee-eEEecc
Confidence 357788999999999999997 888887
No 374
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=27.00 E-value=2.9e+02 Score=23.68 Aligned_cols=67 Identities=19% Similarity=0.122 Sum_probs=43.9
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCe-EEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEE
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLI-PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (348)
.+-|.++|.--..-.......+++.+++.|.. ++.+|+| -+..+++....++.+++ .+.|+.=
T Consensus 93 ~~~Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP---------------~ee~~~~~~~~~~~gi~-~I~lvaP 156 (265)
T COG0159 93 VKVPIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP---------------PEESDELLKAAEKHGID-PIFLVAP 156 (265)
T ss_pred CCCCEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC---------------hHHHHHHHHHHHHcCCc-EEEEeCC
Confidence 34466666655555555667788888888864 8889986 13345666777777776 7777654
Q ss_pred CHHH
Q 018930 172 SSGG 175 (348)
Q Consensus 172 S~Gg 175 (348)
+..-
T Consensus 157 tt~~ 160 (265)
T COG0159 157 TTPD 160 (265)
T ss_pred CCCH
Confidence 4443
No 375
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=26.86 E-value=1.1e+02 Score=21.92 Aligned_cols=71 Identities=21% Similarity=0.218 Sum_probs=37.6
Q ss_pred EEEecCCCCCcccHHHHHHHHHhC-CCeEEEeCC--CCCCCCCCCCCCCCChHhhhHHHHHHHHhhc---CCCcEEEEE
Q 018930 98 FVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDL--KGSGIDLSDTNSVTTLAEYSKPLLDYLENLL---EDEKVILVG 170 (348)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~--~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v~lvG 170 (348)
+|+|.|.++++... +++.|++. |+.++..|- .-.+....+...........+.+.+.++.+. ....+++-|
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~g 77 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQLQNKPDNDNWIIDG 77 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHHHHETTT--EEEEEC
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHhhhccCCCCeEEEeC
Confidence 57888888777643 33344443 899999887 4444432221111123444455556666552 112455555
No 376
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=26.34 E-value=2e+02 Score=26.30 Aligned_cols=56 Identities=11% Similarity=-0.021 Sum_probs=32.1
Q ss_pred HHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEEC
Q 018930 114 TVASLEEV--GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (348)
Q Consensus 114 ~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (348)
+++.+.++ -|.||.+|.|.+++|.... ..-..++.+.+...++-|..+ -++++-.+
T Consensus 280 ~l~~~~~~g~~fDlIilDPPsF~r~k~~~--~~~~rdy~~l~~~~~~iL~pg-G~l~~~s~ 337 (393)
T COG1092 280 WLRKAERRGEKFDLIILDPPSFARSKKQE--FSAQRDYKDLNDLALRLLAPG-GTLVTSSC 337 (393)
T ss_pred HHHHHHhcCCcccEEEECCcccccCcccc--hhHHHHHHHHHHHHHHHcCCC-CEEEEEec
Confidence 34445553 3999999999999986432 222344444444455555554 44444333
No 377
>PRK07451 translation initiation factor Sui1; Validated
Probab=26.23 E-value=2.6e+02 Score=20.42 Aligned_cols=64 Identities=19% Similarity=0.152 Sum_probs=43.6
Q ss_pred ecCCCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC
Q 018930 90 LENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED 163 (348)
Q Consensus 90 ~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (348)
.....+..|-+|-|+.........++..|... -|+|.+-. .....---|..+.+.++|...+..
T Consensus 46 r~gR~GK~VTvV~Gl~~~~~dlk~LaK~LK~k---------~gcGGtvk-d~~IelQGD~r~~v~~~L~~~Gf~ 109 (115)
T PRK07451 46 RSGRKGKTVTVITGFQHKPETLAKLLKQLKTQ---------CGSGGTVK-DNTIEIQGDHRQKILEILIKLGYK 109 (115)
T ss_pred ecCCCCCeEEEEeCCCCCHHHHHHHHHHHHHH---------hcCCceEc-CCEEEEcCcHHHHHHHHHHHCCCe
Confidence 34446789999999988778888999999775 35665532 111112235667788888888763
No 378
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=26.17 E-value=1.4e+02 Score=17.18 Aligned_cols=32 Identities=34% Similarity=0.507 Sum_probs=20.2
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEE
Q 018930 123 LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (348)
Q Consensus 123 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (348)
.+|..+|+-||+. .++|..+++.++.. ++++|
T Consensus 7 a~v~~~~fSgHad--------------~~~L~~~i~~~~p~-~vilV 38 (43)
T PF07521_consen 7 ARVEQIDFSGHAD--------------REELLEFIEQLNPR-KVILV 38 (43)
T ss_dssp SEEEESGCSSS-B--------------HHHHHHHHHHHCSS-EEEEE
T ss_pred EEEEEEeecCCCC--------------HHHHHHHHHhcCCC-EEEEe
Confidence 4566777666652 36777888888664 66655
No 379
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=26.17 E-value=3.3e+02 Score=23.08 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=26.9
Q ss_pred CCCCceEEEecCCCCCcc-cHHHHHHHHHhCCCe-EEEeCCC
Q 018930 92 NIQYKKFVLIHGEGFGAW-CWYKTVASLEEVGLI-PTALDLK 131 (348)
Q Consensus 92 ~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~G~~-vi~~D~~ 131 (348)
++..+.|++++-.+.... .+..+.+.|.+.|+. |-.+|.+
T Consensus 25 g~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 25 GGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 455678999987665543 345666778888884 5566664
No 380
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=26.15 E-value=1.1e+02 Score=22.36 Aligned_cols=15 Identities=20% Similarity=0.140 Sum_probs=11.5
Q ss_pred HHHHHhCCCeEEEeC
Q 018930 115 VASLEEVGLIPTALD 129 (348)
Q Consensus 115 ~~~L~~~G~~vi~~D 129 (348)
.+.|.+.|++|+.+-
T Consensus 100 ~~~L~~~Gw~Vlr~W 114 (117)
T TIGR00632 100 NSRLQELGWRVLRVW 114 (117)
T ss_pred HHHHHHCcCEEEEEe
Confidence 356888899998763
No 381
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=26.11 E-value=2.2e+02 Score=24.48 Aligned_cols=51 Identities=10% Similarity=0.036 Sum_probs=34.1
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEec-CCCCC-CCccChHHHHHHHHHH
Q 018930 288 TGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIK-GSDHC-PFFSKPQSLHKILVEI 344 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~-~~gH~-~~~e~p~~~~~~i~~f 344 (348)
.+||+++.|++ ...++..+.+|+.+.+.++ +.|++ ...-.|++..+.|.+-
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~a 199 (270)
T cd08769 147 GVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREA 199 (270)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHH
Confidence 49999999865 3345566667999888877 44644 3344667766666553
No 382
>KOG0854 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=25.92 E-value=1.8e+02 Score=23.01 Aligned_cols=56 Identities=16% Similarity=0.260 Sum_probs=40.1
Q ss_pred ceEEEecCCCCCccc------HHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc
Q 018930 96 KKFVLIHGEGFGAWC------WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (348)
Q Consensus 96 ~~vvllHG~~~~~~~------~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (348)
=.|+|-|-...+.-| +..++.++.++|...++.. .+...+-.+|++||.++.+..+
T Consensus 34 W~vLFSHPaDFTPVCTTElgr~Akl~pEF~KRnvKlialS----------~d~vesH~~Wi~DIks~~~~~~ 95 (224)
T KOG0854|consen 34 WGVLFSHPADFTPVCTTELGRFAKLAPEFDKRNVKLIALS----------VDDVESHKDWIKDIKSYAKVKN 95 (224)
T ss_pred eEEEecCcccCCcchhHHHHHHHhhChhhhhcCceEEEee----------hhhHHHHHHHHHHHHHHHhccC
Confidence 368999998888776 3455678888888877664 2344567788888888776654
No 383
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=25.92 E-value=89 Score=24.54 Aligned_cols=36 Identities=14% Similarity=0.078 Sum_probs=27.8
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCeEEEe
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTAL 128 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~ 128 (348)
...+.|+++-|-|.+...=...+.+|..+|+.|.++
T Consensus 23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 345678888888888887778889999999998883
No 384
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=25.82 E-value=1.2e+02 Score=25.55 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=17.8
Q ss_pred EEEEECHHHHHHHHHHHhCC
Q 018930 167 ILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p 186 (348)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998654
No 385
>PRK13753 dihydropteroate synthase; Provisional
Probab=25.71 E-value=2.3e+02 Score=24.53 Aligned_cols=59 Identities=25% Similarity=0.179 Sum_probs=30.9
Q ss_pred HHHHhCCC--eEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHHHHH
Q 018930 116 ASLEEVGL--IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSY 180 (348)
Q Consensus 116 ~~L~~~G~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~ 180 (348)
+.+.+.|. .=|.+| ||.|.... .....++ ++...+..+...++ -.+|+|+|-=.++.-.
T Consensus 158 ~~~~~~Gi~~~~IilD-PGiGF~k~-k~~~~n~-~ll~~l~~l~~~~g---~PvLvg~SRKsfig~~ 218 (279)
T PRK13753 158 SALRRSGVAADRLILD-PGMGFFLS-PAPETSL-HVLSNLQKLKSALG---LPLLVSVSRKSFLGAT 218 (279)
T ss_pred HHHHHcCCChhhEEEe-CCCCCCCC-CChHHHH-HHHHhHHHHHHhCC---CceEEEccHhHHHHHH
Confidence 34555566 347788 68886311 0111122 22333333333344 4589999988887643
No 386
>PRK11460 putative hydrolase; Provisional
Probab=25.71 E-value=2.9e+02 Score=22.83 Aligned_cols=41 Identities=20% Similarity=0.020 Sum_probs=27.9
Q ss_pred CCceEEEecCCCCCcccH---HHHHHHHHhCCCeEEEeCCCCCC
Q 018930 94 QYKKFVLIHGEGFGAWCW---YKTVASLEEVGLIPTALDLKGSG 134 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~~---~~~~~~L~~~G~~vi~~D~~G~G 134 (348)
..++|+++||--...-.+ ..+.+.|.+.|..+....++|-|
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~g 190 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLG 190 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 356899999987765543 35667788777766665556444
No 387
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=25.59 E-value=3.6e+02 Score=23.81 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=41.7
Q ss_pred HHHHhCCC-eEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHH-HHHHHHHhC
Q 018930 116 ASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA-CVSYALEHF 185 (348)
Q Consensus 116 ~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~-~a~~~a~~~ 185 (348)
+.+...|- +|+..|.+. .. ++.+.+++.+.+++++.+.. .++|+|+|.=|. ++-++|.+.
T Consensus 42 ~~~~~~Gad~V~~~~~~~--------~~-~~~e~~~~al~~~i~~~~p~-~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 42 AQAIQLGANHVWKLSGKP--------DD-RMIEDYAGVMADTIRQHGAD-GLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred HHHHhcCCCEEEEecCcc--------cc-cChHHHHHHHHHHHHhhCCC-cEEEEcCCccHHHHHHHHHHHh
Confidence 44555554 677777541 22 67889999999998887642 589999887555 777777653
No 388
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=25.38 E-value=3.4e+02 Score=24.15 Aligned_cols=81 Identities=17% Similarity=-0.025 Sum_probs=48.9
Q ss_pred CCCceEEEecCCCCCcccHHHHHHHHHhCCCe---EEEeCCCCCCCCCCC-CCCCCChHhhhHHHHHHHHhhcCCCcEEE
Q 018930 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLI---PTALDLKGSGIDLSD-TNSVTTLAEYSKPLLDYLENLLEDEKVIL 168 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (348)
..+.||++--|. .+...|...++.+.+.|.. ++..-.- |..+ +....++ ..+..+-+..+ -+|.+
T Consensus 131 ~~gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llhC~----s~YP~~~~~~nL----~~I~~Lk~~f~--~pVG~ 199 (329)
T TIGR03569 131 RFGKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLHCT----TEYPAPFEDVNL----NAMDTLKEAFD--LPVGY 199 (329)
T ss_pred hcCCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEEEC----CCCCCCcccCCH----HHHHHHHHHhC--CCEEE
Confidence 446679999998 5888999999999887764 4444421 2111 1122222 22222333343 38888
Q ss_pred EEECHHHHHHHHHHHh
Q 018930 169 VGHSSGGACVSYALEH 184 (348)
Q Consensus 169 vGhS~Gg~~a~~~a~~ 184 (348)
-+|+.|-.+++.+.+.
T Consensus 200 SdHt~G~~~~~aAval 215 (329)
T TIGR03569 200 SDHTLGIEAPIAAVAL 215 (329)
T ss_pred CCCCccHHHHHHHHHc
Confidence 9999997666555543
No 389
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=25.36 E-value=3.6e+02 Score=24.40 Aligned_cols=64 Identities=17% Similarity=0.125 Sum_probs=38.0
Q ss_pred ceEEEecCCCC--CcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEE
Q 018930 96 KKFVLIHGEGF--GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVG 170 (348)
Q Consensus 96 ~~vvllHG~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (348)
..+++++|-.. ....+..+.+.|.+.|..+..+|-- . ...+ .+.++.+.+.++..+.+ -|+-||
T Consensus 26 ~r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~~v--~-------~~p~-~~~v~~~~~~~~~~~~D-~IiavG 91 (380)
T cd08185 26 KKALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFDKV--E-------PNPT-TTTVMEGAALAREEGCD-FVVGLG 91 (380)
T ss_pred CeEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeCCc--c-------CCCC-HHHHHHHHHHHHHcCCC-EEEEeC
Confidence 46777777544 4456778888998888888877611 1 1113 33444555566666665 344343
No 390
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=25.29 E-value=1.2e+02 Score=23.24 Aligned_cols=18 Identities=22% Similarity=0.228 Sum_probs=16.2
Q ss_pred cEEEEEECHHHHHHHHHH
Q 018930 165 KVILVGHSSGGACVSYAL 182 (348)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a 182 (348)
.-.+.|.|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 558899999999999988
No 391
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=25.25 E-value=2.6e+02 Score=23.32 Aligned_cols=80 Identities=16% Similarity=0.147 Sum_probs=47.9
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCC-CCCCCChHhhhHHHHHHHHhhcCC-CcEEEEEECHHHH----HHHHHHHhC
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSD-TNSVTTLAEYSKPLLDYLENLLED-EKVILVGHSSGGA----CVSYALEHF 185 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~----~a~~~a~~~ 185 (348)
...++.|.+.+..|+..|+-|-...-.. ..-..+.+++.+.+. +|.+.+++ -+-+.+|-+.|+. =|+.+...+
T Consensus 100 E~~~eklk~~~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l~-~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~ 178 (275)
T COG1856 100 ESDLEKLKEELVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSLL-LLKENGIRVVPHITIGLDFGKIHGEFKAIDILVNY 178 (275)
T ss_pred HHHHHHHHHhcCcEEEEeecCChHHHHHHHcCCccHHHHHHHHH-HHHHcCceeceeEEEEeccCcccchHHHHHHHhcC
Confidence 4456667777889999999874432100 011235566665553 34444432 2667899999976 467777766
Q ss_pred CcccceEEE
Q 018930 186 PQKISKAIF 194 (348)
Q Consensus 186 p~~v~~lvl 194 (348)
+ ...+|+
T Consensus 179 ~--~DalVl 185 (275)
T COG1856 179 E--PDALVL 185 (275)
T ss_pred C--CCeEEE
Confidence 5 444544
No 392
>PTZ00445 p36-lilke protein; Provisional
Probab=25.22 E-value=3.4e+02 Score=22.47 Aligned_cols=68 Identities=19% Similarity=0.118 Sum_probs=37.7
Q ss_pred ccHHHHHHHHHhCCCeEEEeCCCCC------CCCCCCC-CCCCChHhhhHHHHHHHHhhc-CCCcEEEEEECHHHH
Q 018930 109 WCWYKTVASLEEVGLIPTALDLKGS------GIDLSDT-NSVTTLAEYSKPLLDYLENLL-EDEKVILVGHSSGGA 176 (348)
Q Consensus 109 ~~~~~~~~~L~~~G~~vi~~D~~G~------G~S~~~~-~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvGhS~Gg~ 176 (348)
+.-..+.+.|.+.|+++++.|+=.. |.-..+. ....-+.....++..+++.+. .+-++++|-+|--..
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 3456688889999999999997542 1110111 111111223344555555542 223788998886533
No 393
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=24.90 E-value=3.6e+02 Score=23.98 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=25.3
Q ss_pred CChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHH
Q 018930 144 TTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC 177 (348)
Q Consensus 144 ~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 177 (348)
.+..+.++.+...++......+++|+=|+.=|..
T Consensus 117 ~~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 117 KSPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CCHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 4677777777777777753349999999987665
No 394
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=24.84 E-value=3.5e+02 Score=23.81 Aligned_cols=85 Identities=24% Similarity=0.145 Sum_probs=48.7
Q ss_pred HHHHHHHHhCCCeEEEeCCCCCCCCCCCCC--CC---CChHhhhHHHHHHHHhhcCCCc-----EEEEEECH--------
Q 018930 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTN--SV---TTLAEYSKPLLDYLENLLEDEK-----VILVGHSS-------- 173 (348)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~--~~---~~~~~~~~~l~~~l~~l~~~~~-----v~lvGhS~-------- 173 (348)
...+..|.+.||.|+.+|---.|....-.. .. -++. ..+.|.+++++..++.- ...||-|+
T Consensus 14 SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~-D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~ 92 (329)
T COG1087 14 SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLL-DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYD 92 (329)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccc-cHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHh
Confidence 345666777899999999876665422111 01 1111 12356666666665412 23466664
Q ss_pred ---HHH-HHHHHHHhCCcccceEEEecccc
Q 018930 174 ---GGA-CVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 174 ---Gg~-~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
+|. ..+.++.++ .|+.+|+.+++.
T Consensus 93 NNv~gTl~Ll~am~~~--gv~~~vFSStAa 120 (329)
T COG1087 93 NNVVGTLNLIEAMLQT--GVKKFIFSSTAA 120 (329)
T ss_pred hchHhHHHHHHHHHHh--CCCEEEEecchh
Confidence 344 444555543 499999988754
No 395
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=24.79 E-value=2.5e+02 Score=19.70 Aligned_cols=57 Identities=16% Similarity=0.225 Sum_probs=34.0
Q ss_pred cHHHHHHHHHhCCCe-EEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEE
Q 018930 110 CWYKTVASLEEVGLI-PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (348)
Q Consensus 110 ~~~~~~~~L~~~G~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (348)
.-...+..+++.|.. .+.++++|.--. .....+.++..+....++..+. ++.+++|.
T Consensus 15 NvGkaiN~mad~GiTGFfl~eYrGvsPd---~wkgf~~~EDpE~aik~i~D~s--~~AVlI~t 72 (110)
T COG4075 15 NVGKAINIMADAGITGFFLHEYRGVSPD---KWKGFSKEEDPESAIKAIRDLS--DKAVLIGT 72 (110)
T ss_pred HHHHHHHHHHhcCcceEEEEEecCcChh---HhcCcccccCHHHHHHHHHHhh--hceEEEEE
Confidence 344566777777754 678888886522 2333455555555555555554 36677664
No 396
>PRK07206 hypothetical protein; Provisional
Probab=24.72 E-value=3.5e+02 Score=24.68 Aligned_cols=80 Identities=21% Similarity=0.187 Sum_probs=42.9
Q ss_pred ceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCC----CCCCC---CCCChHhhhHHHHHHHHhhcCCCcEEE
Q 018930 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGID----LSDTN---SVTTLAEYSKPLLDYLENLLEDEKVIL 168 (348)
Q Consensus 96 ~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S----~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (348)
+.|+++.|.... ..+++.+.+.||+++++|-.+.-.. ..... ..... ...+.+.++++..++ ..++
T Consensus 3 k~~liv~~~~~~----~~~~~a~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~l~~~~~~~~~--d~vi 75 (416)
T PRK07206 3 KKVVIVDPFSSG----KFLAPAFKKRGIEPIAVTSSCLLDPYYYASFDTSDFIEVIIN-GDIDDLVEFLRKLGP--EAII 75 (416)
T ss_pred CeEEEEcCCchH----HHHHHHHHHcCCeEEEEEcCCCCchhhhcccCcccchhhhcC-CCHHHHHHHHHHcCC--CEEE
Confidence 467888875332 3577888888999999885432110 00000 00011 234566677777664 4555
Q ss_pred EEECHHHHHHHHHH
Q 018930 169 VGHSSGGACVSYAL 182 (348)
Q Consensus 169 vGhS~Gg~~a~~~a 182 (348)
.|...+-.++..++
T Consensus 76 ~~~e~~~~~~a~l~ 89 (416)
T PRK07206 76 AGAESGVELADRLA 89 (416)
T ss_pred ECCCccHHHHHHHH
Confidence 56555444444443
No 397
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=24.68 E-value=4.8e+02 Score=24.20 Aligned_cols=76 Identities=13% Similarity=0.168 Sum_probs=44.6
Q ss_pred cHHHHHHHHHh-CCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEE-ECHHHHHHHHHHHhCC-
Q 018930 110 CWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVG-HSSGGACVSYALEHFP- 186 (348)
Q Consensus 110 ~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG-hS~Gg~~a~~~a~~~p- 186 (348)
.+...+..+.+ .++.++.+|-+|.-. .-....+.+..+++..... .++||- -++++.-+...+..+.
T Consensus 307 ~L~~aL~~lk~~~~~DvVLIDTaGRs~---------kd~~lm~EL~~~lk~~~Pd-evlLVLsATtk~~d~~~i~~~F~~ 376 (436)
T PRK11889 307 AMTRALTYFKEEARVDYILIDTAGKNY---------RASETVEEMIETMGQVEPD-YICLTLSASMKSKDMIEIITNFKD 376 (436)
T ss_pred HHHHHHHHHHhccCCCEEEEeCccccC---------cCHHHHHHHHHHHhhcCCC-eEEEEECCccChHHHHHHHHHhcC
Confidence 34444455553 368999999887642 1123455566666665554 556653 3456666666666543
Q ss_pred cccceEEEe
Q 018930 187 QKISKAIFL 195 (348)
Q Consensus 187 ~~v~~lvl~ 195 (348)
-.+.++|+-
T Consensus 377 ~~idglI~T 385 (436)
T PRK11889 377 IHIDGIVFT 385 (436)
T ss_pred CCCCEEEEE
Confidence 347777764
No 398
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=24.61 E-value=3.4e+02 Score=24.63 Aligned_cols=75 Identities=12% Similarity=-0.048 Sum_probs=47.2
Q ss_pred EEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEECHHHHH
Q 018930 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC 177 (348)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 177 (348)
.+++.|...+.+....+++.+......|-.+.+=-.+.+.. . ....+..+.+.+.++..++. +.+..|.|.-+
T Consensus 283 yvLI~GvNDs~eda~~L~~~l~~~~~~VnlIpyn~~~~~~~---~-~ps~e~i~~F~~~L~~~Gi~---vtvR~~~G~di 355 (368)
T PRK14456 283 YMLLEGINDSPEDARKLIRFASRFFCKINLIDYNSIVNIKF---E-PVCSSTRERFRDRLLDAGLQ---VTVRKSYGTTI 355 (368)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcCCCeeEEeeeccCCCCCC---C-CCCHHHHHHHHHHHHHCCCc---EEeeCCCCcch
Confidence 68899999888888888888876433333333222332221 1 23344566677777777765 78888888655
Q ss_pred HH
Q 018930 178 VS 179 (348)
Q Consensus 178 a~ 179 (348)
..
T Consensus 356 ~a 357 (368)
T PRK14456 356 NA 357 (368)
T ss_pred hh
Confidence 43
No 399
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B ....
Probab=24.44 E-value=3.5e+02 Score=22.75 Aligned_cols=72 Identities=14% Similarity=0.143 Sum_probs=49.1
Q ss_pred CceEEEe-cCCCCCcccHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEE
Q 018930 95 YKKFVLI-HGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVG 170 (348)
Q Consensus 95 ~~~vvll-HG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (348)
-|.++=+ .|+|.+.......+..+.+.|..-+.++--.+|. ......+.+++++-|....+..... .++|++
T Consensus 70 iPv~vD~d~GyG~~~~~v~~tv~~~~~aG~agi~IEDq~~~~---~~~~l~~~ee~~~kI~Aa~~a~~~~-~~~I~A 142 (238)
T PF13714_consen 70 IPVIVDADTGYGNDPENVARTVRELERAGAAGINIEDQRCGH---GGKQLVSPEEMVAKIRAAVDARRDP-DFVIIA 142 (238)
T ss_dssp SEEEEE-TTTSSSSHHHHHHHHHHHHHCT-SEEEEESBSTTT---STT-B--HHHHHHHHHHHHHHHSST-TSEEEE
T ss_pred CcEEEEcccccCchhHHHHHHHHHHHHcCCcEEEeeccccCC---CCCceeCHHHHHHHHHHHHHhccCC-eEEEEE
Confidence 4544444 6777778899999999999998877776544552 2344569999999999999888755 466665
No 400
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=24.28 E-value=5.1e+02 Score=23.15 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=23.1
Q ss_pred CCceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCC
Q 018930 94 QYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKG 132 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G 132 (348)
.+++=+|+||.|.+.. .-.+++.+-.. +..|+.+|--+
T Consensus 210 ~g~vDi~V~gaGTGGTitgvGRylke~~~-~~kVv~vdp~~ 249 (362)
T KOG1252|consen 210 DGKVDIFVAGAGTGGTITGVGRYLKEQNP-NIKVVGVDPQE 249 (362)
T ss_pred cCCCCEEEeccCCCceeechhHHHHHhCC-CCEEEEeCCCc
Confidence 4566678888766554 33444444333 47888888655
No 401
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=24.25 E-value=2.8e+02 Score=22.67 Aligned_cols=56 Identities=14% Similarity=0.121 Sum_probs=39.3
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCccChHHHHHHHHHH
Q 018930 288 TGRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFFSKPQSLHKILVEI 344 (348)
Q Consensus 288 ~~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 344 (348)
..|++++.|..+...+.+..+.+.+.+.+--++.++.+ ++.-...-+.+.+.+...
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~-~~~~~~~~~~~r~~~~~v 108 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDR-DCGSAGFDASFRRLMKRV 108 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECC-CcccccccHHHHHHHHHh
Confidence 47999999999998888888888888877788888865 222222223344554443
No 402
>PRK07933 thymidylate kinase; Validated
Probab=23.76 E-value=1.6e+02 Score=24.09 Aligned_cols=39 Identities=21% Similarity=0.105 Sum_probs=29.4
Q ss_pred EEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCC
Q 018930 98 FVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGID 136 (348)
Q Consensus 98 vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S 136 (348)
+|.+=|..+++. .-..+.+.|..+|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 455666666555 346788999999999999999987743
No 403
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=23.60 E-value=1e+02 Score=24.34 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=22.3
Q ss_pred EEecCCCCCcccH--HHHHHHHHhCCCeEEEeCCC
Q 018930 99 VLIHGEGFGAWCW--YKTVASLEEVGLIPTALDLK 131 (348)
Q Consensus 99 vllHG~~~~~~~~--~~~~~~L~~~G~~vi~~D~~ 131 (348)
.+.++-||.+... ..++..|+++|++|+.+|+=
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 4445555555533 45788899999999999973
No 404
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=23.55 E-value=82 Score=28.06 Aligned_cols=19 Identities=16% Similarity=-0.024 Sum_probs=15.5
Q ss_pred EEEEEECHHHHHHHHHHHh
Q 018930 166 VILVGHSSGGACVSYALEH 184 (348)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~~ 184 (348)
-.++|||+|=+.|+.++..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3689999999988887743
No 405
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=23.54 E-value=56 Score=24.23 Aligned_cols=34 Identities=9% Similarity=0.021 Sum_probs=24.3
Q ss_pred EEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCC
Q 018930 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK 131 (348)
Q Consensus 98 vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (348)
++...|..++-.-+-.+...|.++|++|...-.+
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4555666666667788999999999999765443
No 406
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=23.49 E-value=4.2e+02 Score=23.78 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=23.0
Q ss_pred CceEEEecCCCCCcccHHHHHHHHHhCCCeEEEeCCCC
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKG 132 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G 132 (348)
+..|++.-| +...=..++..|.++||.|+++|...
T Consensus 21 ~~~IlVtGg---tGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 21 KLRICITGA---GGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCEEEEECC---ccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 344554433 23344567888888899999999754
No 407
>TIGR02363 dhaK1 dihydroxyacetone kinase, DhaK subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the DhaK subunit of the latter type of dihydroxyacetone kinase, but it specifically excludes the DhaK paralog DhaK2 (TIGR02362) found in the same operon as DhaK and DhaK in the Firmicutes.
Probab=23.43 E-value=1.7e+02 Score=25.97 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=28.2
Q ss_pred CCCceEEEecCCCCCcc-----cHHHHHHHHHhCCCeEEEe
Q 018930 93 IQYKKFVLIHGEGFGAW-----CWYKTVASLEEVGLIPTAL 128 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~-----~~~~~~~~L~~~G~~vi~~ 128 (348)
.+...+|++.|+|+.+. .+..+.+.|.++|+.|...
T Consensus 251 ~gd~v~vlvN~LG~ts~lEl~i~~~~v~~~L~~~gi~v~r~ 291 (329)
T TIGR02363 251 SGDRVIVLVNGMGATPLMELYIFYNDVQRLLEQRGVNVART 291 (329)
T ss_pred CCCeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 34569999999999987 3677888998888876543
No 408
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=23.24 E-value=1.4e+02 Score=25.23 Aligned_cols=20 Identities=25% Similarity=0.413 Sum_probs=17.3
Q ss_pred EEEEECHHHHHHHHHHHhCC
Q 018930 167 ILVGHSSGGACVSYALEHFP 186 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p 186 (348)
.+.|-|.|+.+|..+|...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987644
No 409
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=22.79 E-value=5.2e+02 Score=22.64 Aligned_cols=71 Identities=8% Similarity=0.037 Sum_probs=35.0
Q ss_pred CCCceEEEecCCCCC--cccH--HHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC
Q 018930 93 IQYKKFVLIHGEGFG--AWCW--YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED 163 (348)
Q Consensus 93 ~~~~~vvllHG~~~~--~~~~--~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (348)
-.+..|++++..... .... .-+++.+.+.|-+-+..=.|.+|.+..+......-.--+..+..+|+..+.+
T Consensus 34 v~g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~va~lL~~~g~d 108 (304)
T PRK03092 34 VRGCDAFVLQSHTAPINKWLMEQLIMIDALKRASAKRITVVLPFYPYARQDKKHRGREPISARLVADLFKTAGAD 108 (304)
T ss_pred CCCCEEEEEeCCCCCCcHHHHHHHHHHHHHHHcCCCeEEEEEecccccccccccCCCCCccHHHHHHHHHhcCCC
Confidence 345557777765433 2222 2345667776765555555666655322111111112245566666666665
No 410
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=22.52 E-value=1.1e+02 Score=25.41 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=23.0
Q ss_pred CCCceEEEecCCCCCccc-----HHHHHHHHHhCCCeEEEeC
Q 018930 93 IQYKKFVLIHGEGFGAWC-----WYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~-----~~~~~~~L~~~G~~vi~~D 129 (348)
.+++.|++.+|.+..... |..+++.|.+.|+.|+.+-
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 456788888888775554 5678888888887777554
No 411
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=22.49 E-value=53 Score=30.36 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=24.3
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEecCCCCCCCc
Q 018930 289 GRRFFIQTLDDRALSPDVQEKLVRENPPEGVYKIKGSDHCPFF 331 (348)
Q Consensus 289 ~Pvl~i~G~~D~~vp~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 331 (348)
..++++.|+.|++........ .......++|+|++|+.-+
T Consensus 377 tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeeccc
Confidence 479999999999987663322 1234456789999999544
No 412
>cd00423 Pterin_binding Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS. Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.
Probab=22.47 E-value=1.3e+02 Score=25.46 Aligned_cols=24 Identities=29% Similarity=0.412 Sum_probs=16.2
Q ss_pred HHHHHHHHHhCCC--eEEEeCCCCCCC
Q 018930 111 WYKTVASLEEVGL--IPTALDLKGSGI 135 (348)
Q Consensus 111 ~~~~~~~L~~~G~--~vi~~D~~G~G~ 135 (348)
+...++.+.+.|+ .=+.+| ||.|.
T Consensus 152 ~~~~i~~~~~~Gi~~~~IilD-Pg~g~ 177 (258)
T cd00423 152 LEERVEAATEAGIPPEDIILD-PGIGF 177 (258)
T ss_pred HHHHHHHHHHcCCCHHHEEEe-CCCCc
Confidence 4456667777784 457888 67774
No 413
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=22.43 E-value=84 Score=36.38 Aligned_cols=31 Identities=16% Similarity=0.040 Sum_probs=24.4
Q ss_pred HHHHHHHhhcCCCcEEEEEECHHHHHHHHHHH
Q 018930 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (348)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (348)
.+.++++.+|+. +-.++|||+|=+.|+.++.
T Consensus 663 Al~~lL~~~Gi~-Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 663 GQYKLFTQAGFK-ADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHHHHcCCc-cceeecCCHHHHHHHHHhC
Confidence 345566778886 8899999999988887763
No 414
>TIGR02362 dhaK1b probable dihydroxyacetone kinase DhaK1b subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form with a phosphoprotein donor related to PTS transport proteins. This family represents a protein, unique to the Firmicutes (low GC Gram-positives), that appears to be a divergent second copy of the K subunit of that complex; its gene is always found in operons with the other three proteins of the complex.
Probab=22.41 E-value=1.8e+02 Score=25.83 Aligned_cols=35 Identities=14% Similarity=-0.127 Sum_probs=28.1
Q ss_pred CCCceEEEecCCCCCcc-----cHHHHHHHHHhCCCeEEE
Q 018930 93 IQYKKFVLIHGEGFGAW-----CWYKTVASLEEVGLIPTA 127 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~-----~~~~~~~~L~~~G~~vi~ 127 (348)
.+...+|++.|+|+.+. .+..+.+.|.++|+.|..
T Consensus 247 ~gd~v~vlvN~LG~t~~lEl~i~~~~v~~~L~~~gi~v~r 286 (326)
T TIGR02362 247 ADDHYAVLVNNLGGTTPMEQMVFNNDVHELLALEALHLPF 286 (326)
T ss_pred CCCEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 34579999999999987 367788899888887654
No 415
>PRK11468 dihydroxyacetone kinase subunit DhaK; Provisional
Probab=22.16 E-value=1.9e+02 Score=25.96 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=27.4
Q ss_pred CCceEEEecCCCCCcc-----cHHHHHHHHHhCCCeEEEe
Q 018930 94 QYKKFVLIHGEGFGAW-----CWYKTVASLEEVGLIPTAL 128 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~-----~~~~~~~~L~~~G~~vi~~ 128 (348)
+...+||+.|+|+.+. .+..+.+.|.++|+.|...
T Consensus 275 gd~v~vLVNgLG~t~~~El~i~~~~v~~~L~~~gi~v~r~ 314 (356)
T PRK11468 275 GDRVIALVNNLGATPLSELYGVYNRLATRCEQAGLTIERN 314 (356)
T ss_pred CCeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 3469999999999987 3567788898888876543
No 416
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.13 E-value=4.9e+02 Score=23.92 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=23.2
Q ss_pred HHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC
Q 018930 116 ASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED 163 (348)
Q Consensus 116 ~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (348)
+.+.+.+|.||.+|-.|.-. .-..+-+.+.++.+.++++
T Consensus 177 ~~fKke~fdvIIvDTSGRh~---------qe~sLfeEM~~v~~ai~Pd 215 (483)
T KOG0780|consen 177 DRFKKENFDVIIVDTSGRHK---------QEASLFEEMKQVSKAIKPD 215 (483)
T ss_pred HHHHhcCCcEEEEeCCCchh---------hhHHHHHHHHHHHhhcCCC
Confidence 46677789999999766432 1223334444555555554
No 417
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=22.08 E-value=3.3e+02 Score=21.23 Aligned_cols=54 Identities=7% Similarity=0.053 Sum_probs=33.3
Q ss_pred eeeecccCCeeeeeeecCCCCceEEEecCCCCCcc------cHHHHHHHHHhCCCeEEEeC
Q 018930 75 TLSESLSNGKQDTNILENIQYKKFVLIHGEGFGAW------CWYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 75 ~~~~~~~~g~~~~~~~~~~~~~~vvllHG~~~~~~------~~~~~~~~L~~~G~~vi~~D 129 (348)
..+.|..+|..+....-.++ ++||++.--..++. .|+...+.|.+.|..|+.+.
T Consensus 12 dF~Lp~~~g~~v~Lsd~~Gk-~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS 71 (157)
T COG1225 12 DFELPDQDGETVSLSDLRGK-PVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGIS 71 (157)
T ss_pred CeEeecCCCCEEehHHhcCC-cEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 34556666655443222222 56666665555555 36777788888899998775
No 418
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=21.94 E-value=4.4e+02 Score=21.48 Aligned_cols=85 Identities=18% Similarity=0.139 Sum_probs=47.7
Q ss_pred CCCceEEEecCCCCCccc-HHHHHHHHHhC-CCeEEEeCCCCCCCCC-C----CCC----CCCChHhhhHH-----HHHH
Q 018930 93 IQYKKFVLIHGEGFGAWC-WYKTVASLEEV-GLIPTALDLKGSGIDL-S----DTN----SVTTLAEYSKP-----LLDY 156 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~~-~~~~~~~L~~~-G~~vi~~D~~G~G~S~-~----~~~----~~~~~~~~~~~-----l~~~ 156 (348)
+..+.|++|+=....... ...+...|.+. |+.+..++... ..+ . ..+ ..-+...+.+. +.+.
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAI 106 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHH
Confidence 356789999877765443 34566778888 89988887643 111 0 000 00122222221 2333
Q ss_pred HHhhcCCCcEEEEEECHHHHHHHH
Q 018930 157 LENLLEDEKVILVGHSSGGACVSY 180 (348)
Q Consensus 157 l~~l~~~~~v~lvGhS~Gg~~a~~ 180 (348)
|+..-. ....++|.|.|+.+...
T Consensus 107 l~~~~~-~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 107 LKAALE-RGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHH-CCCEEEEECHhHHhhCC
Confidence 333222 26789999999987765
No 419
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=21.80 E-value=4.7e+02 Score=22.85 Aligned_cols=32 Identities=28% Similarity=0.281 Sum_probs=21.0
Q ss_pred EEecCCCCCccc--HHHHHHHHHhCCCeEEEeCC
Q 018930 99 VLIHGEGFGAWC--WYKTVASLEEVGLIPTALDL 130 (348)
Q Consensus 99 vllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~ 130 (348)
+|+++.+.+... -..+++.|.++||.|..+-.
T Consensus 2 ~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~ 35 (350)
T cd03785 2 ILIAGGGTGGHIFPALALAEELRERGAEVLFLGT 35 (350)
T ss_pred EEEEecCchhhhhHHHHHHHHHHhCCCEEEEEEC
Confidence 455554444333 34788999999999977743
No 420
>PRK14481 dihydroxyacetone kinase subunit DhaK; Provisional
Probab=21.74 E-value=1.9e+02 Score=25.67 Aligned_cols=36 Identities=22% Similarity=0.282 Sum_probs=28.0
Q ss_pred CCCceEEEecCCCCCcc-----cHHHHHHHHHhCCCeEEEe
Q 018930 93 IQYKKFVLIHGEGFGAW-----CWYKTVASLEEVGLIPTAL 128 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~-----~~~~~~~~L~~~G~~vi~~ 128 (348)
.+...+||+.|+|+.+. .+..+.+.|.++|+.+...
T Consensus 250 ~gd~v~lLvN~LG~ts~lEl~i~~~~v~~~L~~~gi~i~r~ 290 (331)
T PRK14481 250 AGDEVLVLVNGMGATPLMELYIVYNDVAELLEERGVTVARS 290 (331)
T ss_pred CCCeEEEEEeCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 34569999999999987 3677888898888876543
No 421
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=21.74 E-value=5.5e+02 Score=22.51 Aligned_cols=98 Identities=17% Similarity=0.214 Sum_probs=59.2
Q ss_pred eEEEecCCCCCcc-cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC----------------------CCCCChHhhhHHH
Q 018930 97 KFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDT----------------------NSVTTLAEYSKPL 153 (348)
Q Consensus 97 ~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~----------------------~~~~~~~~~~~~l 153 (348)
..|++-|.+.+.. ....+.+.....|-.++.+|.-=.+...... +...-+..+++.+
T Consensus 3 krIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 3 KRIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 3566667666665 4556667777789999999965432211100 0111234455555
Q ss_pred HHHHHhhcCCCcEEEEEECHHHHHHHHHHHhCCcccceEEE
Q 018930 154 LDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIF 194 (348)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 194 (348)
..++..-+.-.-++-+|-|.|..++.-.+.+.|--|-+++.
T Consensus 83 ~r~l~sR~dV~gmig~GGsgGT~lit~~m~~LPlgvPK~mV 123 (401)
T COG5441 83 VRFLSSRGDVAGMIGMGGSGGTALITPAMRRLPLGVPKVMV 123 (401)
T ss_pred HHHhhcccchhheeecCCCcchHhhhhHHHhcCcCCcceee
Confidence 55555443222677788999999999888888866655543
No 422
>PRK14483 DhaKLM operon coactivator DhaQ; Provisional
Probab=21.66 E-value=1.8e+02 Score=25.76 Aligned_cols=36 Identities=25% Similarity=0.103 Sum_probs=28.3
Q ss_pred CCCceEEEecCCCCCcc-----cHHHHHHHHHhCCCeEEEe
Q 018930 93 IQYKKFVLIHGEGFGAW-----CWYKTVASLEEVGLIPTAL 128 (348)
Q Consensus 93 ~~~~~vvllHG~~~~~~-----~~~~~~~~L~~~G~~vi~~ 128 (348)
.+...+|++.|+|+.+. .+..+.+.|.++|+.|...
T Consensus 250 ~gd~v~vlVN~LG~ts~~El~i~~~~v~~~L~~~gi~v~r~ 290 (329)
T PRK14483 250 KGDNFILLINGLGATTLMEQYIFANDIRRLLELEGLQITFV 290 (329)
T ss_pred CCCeEEEEEeCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 34569999999999987 3677888998888876543
No 423
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=21.36 E-value=2.1e+02 Score=19.22 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=23.6
Q ss_pred HhhhHHHHHHHHh----hcCCCcEEEEEECHHHHHHHHHHHhC
Q 018930 147 AEYSKPLLDYLEN----LLEDEKVILVGHSSGGACVSYALEHF 185 (348)
Q Consensus 147 ~~~~~~l~~~l~~----l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (348)
...+++-.++++. -+.+ ++.++|-|-|=.+|.+.+..+
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK-~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPK-KVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-S-EEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCc-eEEEEecCCcccHHHHHHHHh
Confidence 3444444444444 2334 899999999988887777665
No 424
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=21.34 E-value=3.3e+02 Score=23.55 Aligned_cols=32 Identities=13% Similarity=0.177 Sum_probs=24.1
Q ss_pred eEEEecCCCCCcccHHHHHHHHHhCCCeEEEe
Q 018930 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTAL 128 (348)
Q Consensus 97 ~vvllHG~~~~~~~~~~~~~~L~~~G~~vi~~ 128 (348)
.+++++|-++....|..+.+.|.+.|+.+...
T Consensus 2 ~~~I~N~~~~~~~~~~~~~~~l~~~g~~~~v~ 33 (293)
T TIGR03702 2 ALLILNGKQADNEDVREAVGDLRDEGIQLHVR 33 (293)
T ss_pred EEEEEeCCccchhHHHHHHHHHHHCCCeEEEE
Confidence 46777877666678888888999888775443
No 425
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=21.30 E-value=6.2e+02 Score=22.91 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=25.5
Q ss_pred hhcCCCcEEEEEEC-HHHHHHHHHHHhCCcccceEEEecccc
Q 018930 159 NLLEDEKVILVGHS-SGGACVSYALEHFPQKISKAIFLCATM 199 (348)
Q Consensus 159 ~l~~~~~v~lvGhS-~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 199 (348)
.+... +|.|+|-. .|+.++..++.. -|..+++++.-.
T Consensus 132 ~l~~~-~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d~ 169 (376)
T PRK08762 132 RLLEA-RVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHDV 169 (376)
T ss_pred HHhcC-cEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCCE
Confidence 34444 89999986 566666666553 388899998764
No 426
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=21.07 E-value=1.6e+02 Score=26.08 Aligned_cols=35 Identities=14% Similarity=0.008 Sum_probs=25.9
Q ss_pred CceEEEecC-CCCCcc-----cHHHHHHHHHhCCCeEEEeC
Q 018930 95 YKKFVLIHG-EGFGAW-----CWYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 95 ~~~vvllHG-~~~~~~-----~~~~~~~~L~~~G~~vi~~D 129 (348)
+|.|++.|| ..+... .|..+++.|.++|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 578999999 443333 57789999999987887654
No 427
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=20.73 E-value=3.1e+02 Score=26.03 Aligned_cols=73 Identities=12% Similarity=0.036 Sum_probs=48.7
Q ss_pred CCceEEEecCCCCCcc--cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCCCcEEEEEE
Q 018930 94 QYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (348)
+.+.||++-|+.+++. .-..+...|..+|++|+++..|..-+ ..-.-+-.+-.++...+.+.++=-
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~eE------------~~~~flwRfw~~lP~~G~I~IFdR 105 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSDEE------------RERPPMWRFWRRLPPKGKIGIFFG 105 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCHHH------------hcCcHHHHHHHhCCCCCeEEEEcC
Confidence 4578999999988776 56788999999999999998763211 111223345555654457777776
Q ss_pred CHHHHHH
Q 018930 172 SSGGACV 178 (348)
Q Consensus 172 S~Gg~~a 178 (348)
|+=+-+.
T Consensus 106 SWY~~vl 112 (493)
T TIGR03708 106 SWYTRPL 112 (493)
T ss_pred cccchhh
Confidence 6655443
No 428
>PRK08105 flavodoxin; Provisional
Probab=20.72 E-value=2.5e+02 Score=21.47 Aligned_cols=57 Identities=11% Similarity=-0.029 Sum_probs=32.9
Q ss_pred cCCCCCcccHHHHHHHHHhC--CCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC
Q 018930 102 HGEGFGAWCWYKTVASLEEV--GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED 163 (348)
Q Consensus 102 HG~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (348)
+|-|.-+..|..+.+.|.+. ...=+.+-.-|.|.|. ...+-..+..+.+.++.+|..
T Consensus 59 ~G~Ge~p~~~~~f~~~l~~~~~~l~~~~~avfGlGds~-----Y~~fc~~~~~ld~~l~~lGa~ 117 (149)
T PRK08105 59 TGQGDLPDSIVPLFQALKDTAGYQPNLRYGVIALGDSS-----YDNFCGAGKQFDALLQEQGAK 117 (149)
T ss_pred CCCCCCChhHHHHHHHHHhcCcccCCCEEEEEeeecCC-----HHHHHHHHHHHHHHHHHCCCe
Confidence 45556666788887777653 1111122233556442 135667777788888877754
No 429
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.68 E-value=91 Score=27.87 Aligned_cols=18 Identities=17% Similarity=0.171 Sum_probs=16.1
Q ss_pred EEEEECHHHHHHHHHHHh
Q 018930 167 ILVGHSSGGACVSYALEH 184 (348)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~ 184 (348)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 789999999999999864
No 430
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=20.64 E-value=5.5e+02 Score=23.06 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=23.4
Q ss_pred ceEEEecCCCCCc-ccHHHHHHHHHhCCCeEEEeC
Q 018930 96 KKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALD 129 (348)
Q Consensus 96 ~~vvllHG~~~~~-~~~~~~~~~L~~~G~~vi~~D 129 (348)
..++++.|-.... ..+..+.+.|.+.|+.+..+|
T Consensus 24 ~~~lvv~~~~~~~~~~~~~v~~~L~~~~~~~~~~~ 58 (370)
T cd08551 24 RKALIVTDPGLVKTGVLDKVIDSLKEAGIEVVIFD 58 (370)
T ss_pred CeEEEEeCcchhhCccHHHHHHHHHHcCCeEEEEC
Confidence 3555665543333 566788899998888888777
No 431
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=20.59 E-value=5.4e+02 Score=23.28 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=34.7
Q ss_pred ceEEEecCCCCCcc-cHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC
Q 018930 96 KKFVLIHGEGFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED 163 (348)
Q Consensus 96 ~~vvllHG~~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (348)
..++++.|-..... .+..+.+.|.+.|+.+..+|- . ....+ .+.++.+.+.++..+.+
T Consensus 30 ~r~lvvt~~~~~~~g~~~~v~~~L~~~~i~~~~~~~--v-------~~~p~-~~~v~~~~~~~~~~~~D 88 (379)
T TIGR02638 30 KKALVVTDKDLIKFGVADKVTDLLDEAGIAYELFDE--V-------KPNPT-ITVVKAGVAAFKASGAD 88 (379)
T ss_pred CEEEEEcCcchhhccchHHHHHHHHHCCCeEEEECC--C-------CCCcC-HHHHHHHHHHHHhcCCC
Confidence 45667777543333 567788899888888887761 1 11112 34445555666666665
No 432
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=20.57 E-value=5.1e+02 Score=21.69 Aligned_cols=55 Identities=15% Similarity=0.103 Sum_probs=34.0
Q ss_pred ccHHHHHHHHHhCCCeEE-EeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhcCC
Q 018930 109 WCWYKTVASLEEVGLIPT-ALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED 163 (348)
Q Consensus 109 ~~~~~~~~~L~~~G~~vi-~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (348)
......+..|.++|.+|+ ++.--..|..-.........+.+++.+.+++++.+.+
T Consensus 51 ~~~~~~i~~l~~kG~KVl~sigg~~~~~~~~~~~~~~~~~~fa~~l~~~v~~yglD 106 (255)
T cd06542 51 TNKETYIRPLQAKGTKVLLSILGNHLGAGFANNLSDAAAKAYAKAIVDTVDKYGLD 106 (255)
T ss_pred HHHHHHHHHHhhCCCEEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 345567778888899986 4553222211101122234778899999999887765
No 433
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=20.52 E-value=1.8e+02 Score=30.90 Aligned_cols=29 Identities=31% Similarity=0.234 Sum_probs=21.9
Q ss_pred HhhhHHHHHHHHhhcCCCcEEEEEECHHHH
Q 018930 147 AEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (348)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (348)
....-.+.+++..+++. +-.+||||.|-.
T Consensus 566 tAiQiaLtDlLs~lgi~-PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 566 TAIQIALTDLLSCLGIR-PDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHHHHHHhcCCC-CCcccccccchh
Confidence 33444667788888997 889999999843
No 434
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=20.33 E-value=1.2e+02 Score=26.50 Aligned_cols=32 Identities=16% Similarity=0.027 Sum_probs=22.5
Q ss_pred cCCCCceEEEecCCCCCcccHHH--HHHHHHhCC
Q 018930 91 ENIQYKKFVLIHGEGFGAWCWYK--TVASLEEVG 122 (348)
Q Consensus 91 ~~~~~~~vvllHG~~~~~~~~~~--~~~~L~~~G 122 (348)
+.+.+|.++=+||+.++...|-. +++.+-..|
T Consensus 105 ~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 45678889999999999987742 444444444
No 435
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=20.20 E-value=5.6e+02 Score=21.98 Aligned_cols=69 Identities=14% Similarity=0.115 Sum_probs=36.2
Q ss_pred HHHhCCCeEEEeCCCCCCCCCCCCCCCCChHhhhHHHHHHHHhhc------CCCcEEEEEECHHHHHHHHHHHhCC--cc
Q 018930 117 SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL------EDEKVILVGHSSGGACVSYALEHFP--QK 188 (348)
Q Consensus 117 ~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~------~~~~v~lvGhS~Gg~~a~~~a~~~p--~~ 188 (348)
.+..++|.++.+|-+|.... -....+.+..+.+... .. .++||--+.-|.-++.-+..+- -.
T Consensus 149 ~~~~~~~D~ViIDT~G~~~~---------d~~~~~el~~~~~~~~~~~~~~~~-~~~LVl~a~~~~~~~~~~~~f~~~~~ 218 (272)
T TIGR00064 149 KAKARNIDVVLIDTAGRLQN---------KVNLMDELKKIKRVIKKVDKDAPD-EVLLVLDATTGQNALEQAKVFNEAVG 218 (272)
T ss_pred HHHHCCCCEEEEeCCCCCcc---------hHHHHHHHHHHHHHHhcccCCCCc-eEEEEEECCCCHHHHHHHHHHHhhCC
Confidence 34456899999999987642 1233334444443332 34 4555554444443444443322 23
Q ss_pred cceEEEe
Q 018930 189 ISKAIFL 195 (348)
Q Consensus 189 v~~lvl~ 195 (348)
+.++|+-
T Consensus 219 ~~g~IlT 225 (272)
T TIGR00064 219 LTGIILT 225 (272)
T ss_pred CCEEEEE
Confidence 6676664
No 436
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=20.13 E-value=7.2e+02 Score=23.20 Aligned_cols=37 Identities=11% Similarity=-0.022 Sum_probs=28.5
Q ss_pred CCceEEEecCCCCCccc--HHHHHHHHHhCCCeEEEeCC
Q 018930 94 QYKKFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDL 130 (348)
Q Consensus 94 ~~~~vvllHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~ 130 (348)
..|.+|++-|..+.... -..++..|.+.|++|..++.
T Consensus 93 ~~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~ 131 (437)
T PRK00771 93 LKPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAA 131 (437)
T ss_pred CCCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecC
Confidence 45777888888877764 35677888888999998875
No 437
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=20.02 E-value=2.8e+02 Score=26.86 Aligned_cols=100 Identities=18% Similarity=0.170 Sum_probs=53.7
Q ss_pred CceEEEecCCCCCcccHHHHHHH--------HHhCCCeEEEeCCCC----CCCCCCCCC--CCCChHhhhHHHHHHHHhh
Q 018930 95 YKKFVLIHGEGFGAWCWYKTVAS--------LEEVGLIPTALDLKG----SGIDLSDTN--SVTTLAEYSKPLLDYLENL 160 (348)
Q Consensus 95 ~~~vvllHG~~~~~~~~~~~~~~--------L~~~G~~vi~~D~~G----~G~S~~~~~--~~~~~~~~~~~l~~~l~~l 160 (348)
.-++-+-=|.+-+......+.+. |.+-|=.|+.-.--| ||.-+.+.. ...-...+...|.+.+..
T Consensus 258 ~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e- 336 (655)
T COG3887 258 NIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE- 336 (655)
T ss_pred CcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh-
Confidence 44677777877777765544431 222234454443222 332211111 111223344445555544
Q ss_pred cCCCcEEEEEE------CHHHHHHHHHHHhCCcccceEEEeccc
Q 018930 161 LEDEKVILVGH------SSGGACVSYALEHFPQKISKAIFLCAT 198 (348)
Q Consensus 161 ~~~~~v~lvGh------S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 198 (348)
. ++|+++|| +.|+++++..-+..-.+ .+.++++|.
T Consensus 337 -~-d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 337 -S-DNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred -c-CcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 3 49999999 78999988776554343 556777764
Done!