Query 018934
Match_columns 348
No_of_seqs 133 out of 1779
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 05:17:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018934.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018934hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 1E-39 2.2E-44 302.2 28.7 336 7-347 9-352 (358)
2 PRK11272 putative DMT superfam 100.0 3.4E-32 7.5E-37 247.7 28.3 279 11-329 8-288 (292)
3 PRK11689 aromatic amino acid e 100.0 3.1E-32 6.7E-37 248.3 26.8 284 9-329 2-290 (295)
4 PRK11453 O-acetylserine/cystei 100.0 9.5E-32 2.1E-36 245.7 28.5 278 13-329 6-290 (299)
5 PRK10532 threonine and homoser 100.0 3.8E-31 8.2E-36 240.9 29.6 279 7-331 8-286 (293)
6 PRK15430 putative chlorampheni 100.0 2E-30 4.3E-35 236.5 24.5 279 5-325 2-284 (296)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 6E-30 1.3E-34 229.4 26.4 257 23-321 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 1.4E-29 3E-34 231.9 25.8 286 13-332 4-299 (302)
9 PF06027 DUF914: Eukaryotic pr 100.0 2.2E-26 4.8E-31 209.0 31.2 298 11-332 13-311 (334)
10 TIGR03340 phn_DUF6 phosphonate 100.0 5.5E-27 1.2E-31 212.4 26.1 274 13-323 3-280 (281)
11 PTZ00343 triose or hexose phos 100.0 2.3E-26 4.9E-31 213.9 28.0 284 9-327 47-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 5E-25 1.1E-29 197.1 23.1 250 11-301 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 8.1E-23 1.8E-27 185.6 30.4 282 7-327 3-288 (292)
14 COG5006 rhtA Threonine/homoser 99.9 2.7E-23 5.9E-28 175.4 24.4 277 12-333 13-289 (292)
15 COG2962 RarD Predicted permeas 99.9 7.2E-23 1.6E-27 177.5 21.3 284 7-330 3-287 (293)
16 KOG4510 Permease of the drug/m 99.9 9.4E-24 2E-28 179.2 5.4 292 10-330 37-329 (346)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 4.3E-20 9.4E-25 167.6 24.7 278 12-326 2-288 (290)
18 KOG2765 Predicted membrane pro 99.8 2.2E-19 4.8E-24 159.8 20.9 232 81-333 162-397 (416)
19 PF08449 UAA: UAA transporter 99.8 4E-18 8.7E-23 156.0 27.3 267 40-331 32-302 (303)
20 KOG1441 Glucose-6-phosphate/ph 99.8 3.9E-18 8.4E-23 153.4 13.2 291 10-334 16-315 (316)
21 COG2510 Predicted membrane pro 99.7 2.5E-15 5.5E-20 114.2 12.8 135 11-155 3-138 (140)
22 KOG2766 Predicted membrane pro 99.6 3.6E-15 7.8E-20 126.4 9.3 258 38-330 46-303 (336)
23 COG2510 Predicted membrane pro 99.6 7.1E-14 1.5E-18 106.3 14.1 136 187-326 4-139 (140)
24 KOG1580 UDP-galactose transpor 99.5 6E-13 1.3E-17 111.7 16.3 261 40-329 53-316 (337)
25 KOG1443 Predicted integral mem 99.5 6.5E-12 1.4E-16 109.6 21.9 283 11-325 15-314 (349)
26 PF04142 Nuc_sug_transp: Nucle 99.5 2.7E-12 5.7E-17 113.2 19.8 232 73-317 12-244 (244)
27 KOG1444 Nucleotide-sugar trans 99.5 2.3E-11 5E-16 107.6 23.7 289 10-332 11-306 (314)
28 KOG1581 UDP-galactose transpor 99.4 1.5E-11 3.3E-16 107.4 19.5 263 39-330 50-317 (327)
29 KOG3912 Predicted integral mem 99.4 3.4E-12 7.4E-17 109.9 15.1 282 24-325 16-333 (372)
30 PF00892 EamA: EamA-like trans 99.4 4.7E-13 1E-17 105.7 8.8 122 21-154 1-124 (126)
31 KOG2234 Predicted UDP-galactos 99.4 3.4E-10 7.4E-15 101.7 26.6 296 11-330 15-326 (345)
32 PF00892 EamA: EamA-like trans 99.4 5.5E-13 1.2E-17 105.3 7.9 125 196-325 1-125 (126)
33 TIGR00950 2A78 Carboxylate/Ami 99.2 5.6E-10 1.2E-14 99.9 16.6 133 7-151 124-259 (260)
34 PF06800 Sugar_transport: Suga 99.1 1.7E-08 3.6E-13 89.0 21.1 251 39-323 11-268 (269)
35 PF13536 EmrE: Multidrug resis 99.1 1E-10 2.2E-15 91.0 6.0 103 45-155 2-105 (113)
36 KOG1442 GDP-fucose transporter 99.1 3.4E-10 7.4E-15 97.4 8.6 282 26-335 43-336 (347)
37 PRK15430 putative chlorampheni 99.0 2.7E-09 5.9E-14 97.4 12.8 138 183-325 5-144 (296)
38 PF03151 TPT: Triose-phosphate 99.0 3.1E-09 6.7E-14 87.2 11.5 138 187-326 1-153 (153)
39 TIGR03340 phn_DUF6 phosphonate 99.0 6.1E-09 1.3E-13 94.4 14.5 133 188-326 3-135 (281)
40 KOG4314 Predicted carbohydrate 99.0 5.6E-09 1.2E-13 85.8 12.3 214 87-330 62-280 (290)
41 PRK10532 threonine and homoser 99.0 2.9E-08 6.3E-13 90.5 16.1 134 9-155 146-280 (293)
42 KOG1583 UDP-N-acetylglucosamin 98.9 9.4E-08 2E-12 82.8 17.2 263 41-325 34-313 (330)
43 TIGR00688 rarD rarD protein. T 98.9 1.1E-08 2.5E-13 91.3 12.3 135 187-325 3-141 (256)
44 KOG1582 UDP-galactose transpor 98.9 4E-08 8.6E-13 84.8 14.3 227 77-329 105-335 (367)
45 PRK11272 putative DMT superfam 98.9 4.3E-08 9.3E-13 89.4 15.2 136 9-155 148-284 (292)
46 PRK02971 4-amino-4-deoxy-L-ara 98.9 2E-08 4.3E-13 79.4 10.7 122 187-330 3-126 (129)
47 PF05653 Mg_trans_NIPA: Magnes 98.9 3.9E-07 8.6E-12 82.8 19.5 229 81-328 52-294 (300)
48 PRK11689 aromatic amino acid e 98.8 9.1E-08 2E-12 87.4 14.7 132 10-155 155-286 (295)
49 PLN00411 nodulin MtN21 family 98.8 1.5E-07 3.3E-12 87.8 15.3 137 11-155 189-327 (358)
50 PRK13499 rhamnose-proton sympo 98.8 2.9E-06 6.3E-11 77.9 22.9 301 8-327 4-342 (345)
51 PF13536 EmrE: Multidrug resis 98.7 7.2E-08 1.6E-12 74.9 7.2 107 222-329 3-109 (113)
52 COG5070 VRG4 Nucleotide-sugar 98.6 8.4E-08 1.8E-12 80.5 7.4 262 41-332 38-302 (309)
53 TIGR00803 nst UDP-galactose tr 98.6 3.8E-07 8.3E-12 79.7 11.1 211 105-324 5-222 (222)
54 PF03151 TPT: Triose-phosphate 98.6 1.7E-06 3.7E-11 70.8 14.2 136 12-154 1-151 (153)
55 PRK11453 O-acetylserine/cystei 98.6 1.3E-06 2.7E-11 80.0 14.5 138 10-155 142-286 (299)
56 TIGR00817 tpt Tpt phosphate/ph 98.5 8E-07 1.7E-11 81.4 10.6 138 9-155 143-292 (302)
57 PRK15051 4-amino-4-deoxy-L-ara 98.5 7.1E-07 1.5E-11 68.8 7.9 68 258-325 41-108 (111)
58 COG2962 RarD Predicted permeas 98.4 2.3E-06 5E-11 75.2 10.3 139 185-327 6-145 (293)
59 PTZ00343 triose or hexose phos 98.4 9.5E-06 2.1E-10 75.8 14.3 136 187-326 50-186 (350)
60 TIGR00776 RhaT RhaT L-rhamnose 98.3 5.6E-06 1.2E-10 75.3 11.8 132 10-155 151-287 (290)
61 KOG2922 Uncharacterized conser 98.3 1.8E-05 4E-10 70.5 12.6 279 6-331 16-311 (335)
62 COG0697 RhaT Permeases of the 98.2 3.2E-05 6.9E-10 69.9 14.6 132 10-155 153-286 (292)
63 PRK15051 4-amino-4-deoxy-L-ara 98.2 1.1E-05 2.4E-10 62.2 9.2 68 82-155 40-108 (111)
64 COG4975 GlcU Putative glucose 98.2 7E-07 1.5E-11 76.2 2.6 276 12-324 3-283 (288)
65 PF06027 DUF914: Eukaryotic pr 98.1 0.0002 4.4E-09 65.8 16.1 141 7-156 164-305 (334)
66 PF06800 Sugar_transport: Suga 98.0 9.4E-05 2E-09 65.5 12.3 135 7-153 134-268 (269)
67 COG5006 rhtA Threonine/homoser 98.0 0.0002 4.3E-09 61.8 13.0 136 7-155 144-281 (292)
68 PRK10452 multidrug efflux syst 98.0 2.3E-05 5E-10 60.8 6.5 71 259-329 35-106 (120)
69 PRK09541 emrE multidrug efflux 97.8 0.00012 2.7E-09 56.0 8.6 69 260-328 36-105 (110)
70 PF08449 UAA: UAA transporter 97.8 0.00046 1E-08 63.2 12.9 128 200-334 14-144 (303)
71 PRK10650 multidrug efflux syst 97.6 0.00054 1.2E-08 52.3 9.0 65 261-325 42-107 (109)
72 PRK02971 4-amino-4-deoxy-L-ara 97.6 0.00019 4.1E-09 56.8 6.7 116 12-155 3-121 (129)
73 PF04657 DUF606: Protein of un 97.6 0.0009 2E-08 53.6 10.1 132 187-323 2-138 (138)
74 PRK11431 multidrug efflux syst 97.6 0.00053 1.2E-08 52.0 8.1 66 261-326 36-102 (105)
75 COG2076 EmrE Membrane transpor 97.5 0.00021 4.6E-09 53.7 5.6 65 263-327 39-104 (106)
76 PF05653 Mg_trans_NIPA: Magnes 97.5 0.00042 9.2E-09 63.1 8.3 121 181-327 2-123 (300)
77 KOG4510 Permease of the drug/m 97.5 6.1E-05 1.3E-09 65.3 2.5 139 182-329 34-172 (346)
78 PF06379 RhaT: L-rhamnose-prot 97.4 0.031 6.8E-07 50.9 18.3 302 8-325 4-339 (344)
79 COG3238 Uncharacterized protei 97.3 0.0034 7.4E-08 50.4 9.9 140 185-328 4-148 (150)
80 PRK10650 multidrug efflux syst 97.2 0.0047 1E-07 47.1 9.9 68 81-154 38-106 (109)
81 PF04657 DUF606: Protein of un 97.2 0.0088 1.9E-07 47.9 12.0 129 14-153 4-138 (138)
82 PRK10452 multidrug efflux syst 97.1 0.0015 3.2E-08 50.8 6.4 67 83-155 35-102 (120)
83 PF10639 UPF0546: Uncharacteri 97.1 0.0028 6E-08 48.5 7.6 110 17-154 2-112 (113)
84 PF00893 Multi_Drug_Res: Small 97.1 0.0025 5.5E-08 47.4 7.1 57 261-317 36-93 (93)
85 COG2076 EmrE Membrane transpor 97.1 0.0016 3.4E-08 49.0 5.9 66 84-155 36-102 (106)
86 COG4975 GlcU Putative glucose 97.0 0.00067 1.5E-08 58.4 3.8 138 187-335 3-145 (288)
87 PRK13499 rhamnose-proton sympo 97.0 0.023 5E-07 52.5 13.8 146 8-155 171-340 (345)
88 PRK11431 multidrug efflux syst 97.0 0.0037 8E-08 47.4 7.0 67 83-155 34-101 (105)
89 PRK09541 emrE multidrug efflux 96.9 0.0034 7.3E-08 48.1 6.4 61 89-155 41-102 (110)
90 PF04142 Nuc_sug_transp: Nucle 96.8 0.0032 7E-08 55.6 6.7 75 256-331 20-94 (244)
91 PF07857 DUF1632: CEO family ( 96.7 0.029 6.2E-07 49.6 11.7 137 12-161 1-139 (254)
92 KOG1441 Glucose-6-phosphate/ph 96.3 0.011 2.3E-07 54.0 6.5 140 8-155 160-306 (316)
93 KOG2234 Predicted UDP-galactos 96.3 0.2 4.3E-06 45.9 14.4 143 187-331 16-169 (345)
94 PF10639 UPF0546: Uncharacteri 96.1 0.025 5.4E-07 43.3 6.7 61 263-323 50-111 (113)
95 PF00893 Multi_Drug_Res: Small 96.1 0.023 5E-07 42.2 6.4 54 87-146 38-92 (93)
96 COG3238 Uncharacterized protei 95.9 0.24 5.1E-06 40.0 11.7 137 11-154 5-144 (150)
97 KOG2765 Predicted membrane pro 95.9 0.1 2.2E-06 48.0 10.6 139 8-155 244-389 (416)
98 KOG2922 Uncharacterized conser 95.4 0.01 2.2E-07 53.4 2.4 129 181-334 16-144 (335)
99 TIGR00803 nst UDP-galactose tr 95.1 0.31 6.7E-06 42.3 10.8 67 81-153 155-221 (222)
100 PF07857 DUF1632: CEO family ( 94.2 0.53 1.2E-05 41.7 10.1 127 187-331 1-139 (254)
101 KOG1444 Nucleotide-sugar trans 93.9 0.5 1.1E-05 42.7 9.3 141 8-155 154-299 (314)
102 KOG1580 UDP-galactose transpor 93.3 0.18 3.8E-06 43.5 5.2 137 12-155 173-312 (337)
103 COG5070 VRG4 Nucleotide-sugar 93.1 0.43 9.3E-06 40.9 7.2 136 11-153 155-293 (309)
104 KOG1581 UDP-galactose transpor 92.7 1.7 3.6E-05 39.2 10.6 139 8-153 169-310 (327)
105 PF06379 RhaT: L-rhamnose-prot 89.8 1.8 3.9E-05 39.7 8.1 142 183-329 4-156 (344)
106 KOG4314 Predicted carbohydrate 89.5 0.21 4.7E-06 41.8 1.8 62 266-327 65-126 (290)
107 KOG3912 Predicted integral mem 86.2 0.62 1.3E-05 41.4 2.7 64 262-325 94-157 (372)
108 KOG1443 Predicted integral mem 84.2 16 0.00034 33.3 10.5 68 262-329 92-159 (349)
109 PRK02237 hypothetical protein; 83.3 5.1 0.00011 30.2 6.0 45 284-328 63-107 (109)
110 KOG4831 Unnamed protein [Funct 79.7 8.7 0.00019 28.8 6.1 59 267-325 65-124 (125)
111 PF05977 MFS_3: Transmembrane 79.4 48 0.001 32.9 13.3 37 287-323 353-389 (524)
112 PF02694 UPF0060: Uncharacteri 77.7 3.2 6.9E-05 31.2 3.4 45 285-329 62-106 (107)
113 PF04342 DUF486: Protein of un 77.0 2.9 6.3E-05 31.3 3.0 32 294-325 76-107 (108)
114 COG3169 Uncharacterized protei 71.1 9.1 0.0002 28.3 4.2 34 293-326 82-115 (116)
115 KOG1582 UDP-galactose transpor 68.8 38 0.00082 30.3 8.4 138 11-155 190-331 (367)
116 KOG1442 GDP-fucose transporter 68.2 14 0.00029 33.1 5.5 135 9-150 183-321 (347)
117 KOG4831 Unnamed protein [Funct 68.2 11 0.00025 28.2 4.3 113 13-155 5-124 (125)
118 COG4657 RnfA Predicted NADH:ub 66.4 30 0.00064 28.2 6.7 97 116-235 77-185 (193)
119 TIGR00905 2A0302 transporter, 62.6 1.6E+02 0.0034 28.7 15.2 46 285-330 393-438 (473)
120 PF06570 DUF1129: Protein of u 56.9 1.2E+02 0.0027 25.8 11.9 34 74-107 142-175 (206)
121 PF11044 TMEMspv1-c74-12: Plec 54.0 4.3 9.3E-05 25.0 0.0 18 306-323 2-19 (49)
122 COG1742 Uncharacterized conser 53.8 40 0.00088 25.3 5.0 46 284-329 62-107 (109)
123 COG1742 Uncharacterized conser 52.3 27 0.00059 26.2 3.9 22 135-156 83-104 (109)
124 PRK02237 hypothetical protein; 48.2 87 0.0019 23.8 6.1 38 113-156 68-105 (109)
125 PF07168 Ureide_permease: Urei 48.1 8 0.00017 35.0 0.8 66 258-325 77-145 (336)
126 PF02694 UPF0060: Uncharacteri 46.9 74 0.0016 24.1 5.6 39 112-156 65-103 (107)
127 KOG2766 Predicted membrane pro 42.6 5.9 0.00013 34.9 -0.9 134 185-327 17-151 (336)
128 PF06570 DUF1129: Protein of u 41.5 1.3E+02 0.0028 25.6 7.3 23 186-209 179-201 (206)
129 PRK06638 NADH:ubiquinone oxido 40.6 2.3E+02 0.005 24.1 12.2 35 295-329 133-169 (198)
130 COG3086 RseC Positive regulato 38.4 7.9 0.00017 30.9 -0.7 19 283-301 77-95 (150)
131 KOG1583 UDP-N-acetylglucosamin 36.3 2.8E+02 0.006 25.2 8.3 133 11-155 164-313 (330)
132 PF15102 TMEM154: TMEM154 prot 35.9 38 0.00081 27.2 2.8 18 315-332 70-87 (146)
133 PRK11902 ampG muropeptide tran 35.8 3.7E+02 0.008 25.1 12.8 30 184-214 245-274 (402)
134 COG1971 Predicted membrane pro 35.5 32 0.00069 29.0 2.4 40 286-325 46-86 (190)
135 PRK11469 hypothetical protein; 35.1 20 0.00043 30.3 1.2 41 285-325 45-86 (188)
136 COG4858 Uncharacterized membra 34.1 2.9E+02 0.0062 23.3 7.6 69 125-209 148-216 (226)
137 TIGR03810 arg_ornith_anti argi 33.3 4.6E+02 0.0099 25.4 17.1 42 289-330 392-433 (468)
138 PF09656 PGPGW: Putative trans 32.7 83 0.0018 20.5 3.5 44 140-211 5-48 (53)
139 PF04246 RseC_MucC: Positive r 32.0 14 0.0003 29.3 -0.3 17 285-301 72-88 (135)
140 COG4858 Uncharacterized membra 30.6 3.3E+02 0.0072 23.0 10.3 111 12-133 101-219 (226)
141 PF04342 DUF486: Protein of un 28.4 59 0.0013 24.5 2.6 69 78-152 30-104 (108)
142 PF06781 UPF0233: Uncharacteri 28.1 2E+02 0.0043 20.9 5.2 58 249-326 28-85 (87)
143 PF07168 Ureide_permease: Urei 27.8 98 0.0021 28.3 4.3 113 16-130 1-124 (336)
144 PRK13108 prolipoprotein diacyl 27.8 1.6E+02 0.0035 28.7 6.1 24 306-329 254-277 (460)
145 PF09529 Intg_mem_TP0381: Inte 27.7 3.9E+02 0.0085 22.9 13.8 58 89-155 52-110 (225)
146 PF10101 DUF2339: Predicted me 26.4 7.4E+02 0.016 25.6 26.7 94 26-128 18-114 (745)
147 TIGR02840 spore_YtaF putative 25.6 39 0.00084 29.0 1.4 43 283-325 36-80 (206)
148 COG3965 Predicted Co/Zn/Cd cat 25.5 5E+02 0.011 23.3 11.7 107 17-128 100-211 (314)
149 TIGR01167 LPXTG_anchor LPXTG-m 23.5 1E+02 0.0022 17.5 2.5 18 307-324 11-28 (34)
150 PRK10862 SoxR reducing system 23.2 24 0.00052 28.7 -0.3 9 289-297 83-91 (154)
151 PF08693 SKG6: Transmembrane a 22.6 74 0.0016 19.4 1.8 18 312-329 21-38 (40)
152 PRK02251 putative septation in 21.1 3.4E+02 0.0073 19.8 5.8 57 249-326 29-85 (87)
153 PF05297 Herpes_LMP1: Herpesvi 20.1 35 0.00075 30.6 0.0 32 99-130 44-76 (381)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1e-39 Score=302.18 Aligned_cols=336 Identities=44% Similarity=0.748 Sum_probs=262.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHH
Q 018934 7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLS 85 (348)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g 85 (348)
+|+.+++..|+...+.+++..++.|.+++.+++|..+.++|+.++.++++++ ++.+ |+ ++.++.+++++..+.+.|
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~-~~~~~~~--~~~~~~~~~~~~~l~l~g 85 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPS-LFFTNRS--RSLPPLSVSILSKIGLLG 85 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHH-HHHHHHh--cccCcchHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999988 7764 33 222445678889999999
Q ss_pred HHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCC
Q 018934 86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST 165 (348)
Q Consensus 86 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~ 165 (348)
+++..++.+++.|++|+++++++++.+++|+++.+++++++.|+.+.++|.++.+++|+++++.|+.++...+++.....
T Consensus 86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~ 165 (358)
T PLN00411 86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA 165 (358)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 99877788999999999999999999999999999999996555555555688899999999999988773333211100
Q ss_pred CCC-cccc-CCCC-CCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccC-C
Q 018934 166 ASI-PAQS-LHWT-PQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGES-N 241 (348)
Q Consensus 166 ~~~-~~~~-~~~~-~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (348)
+++ ..+. ++.. ...+..++..|+.+++.++++||.|++++ |+..+++++....+.+++..+.+...+.....++ +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~-~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~ 244 (358)
T PLN00411 166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQ-AHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNN 244 (358)
T ss_pred cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 000 0000 0000 11223456779999999999999999999 9998898755666777777776666655555543 2
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhh
Q 018934 242 LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGF 321 (348)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~ 321 (348)
...|....+.....+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|+
T Consensus 245 ~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv 323 (358)
T PLN00411 245 PSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGF 323 (358)
T ss_pred cccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 233322233344557777775 5689999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeccccccccCC---CCCCCCCCCCC
Q 018934 322 YTVLWGKANDEAGKN---KDSCKIPLLQS 347 (348)
Q Consensus 322 ~l~~~~~~~~~~~~~---~~~~~~p~l~~ 347 (348)
++..+.++||.+.++ +++|+.|++-+
T Consensus 324 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (358)
T PLN00411 324 YAVMWGKANEEKDQLLSFSGKEKTPLLLN 352 (358)
T ss_pred HHHHhhhhhhhhhcccCccccccchhhhh
Confidence 999987777665555 33556666543
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=3.4e-32 Score=247.74 Aligned_cols=279 Identities=14% Similarity=0.115 Sum_probs=229.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-H
Q 018934 11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-S 89 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 89 (348)
.-.+..+...++||.++++.|... ++++|.+++++|+..+.++++++ ...+|+ + ..++++++.....|.++ .
T Consensus 8 ~~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~-~~~~~~--~---~~~~~~~~~~~~~g~~~~~ 80 (292)
T PRK11272 8 PLFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAF-LLLRGH--P---LPTLRQWLNAALIGLLLLA 80 (292)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHH-HHHhCC--C---CCcHHHHHHHHHHHHHHHH
Confidence 344557778999999999999996 79999999999999999998888 654322 2 23456788888889887 7
Q ss_pred HHHHHHHHhh-cccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCC
Q 018934 90 FFRILGYTGI-AYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI 168 (348)
Q Consensus 90 ~~~~~~~~al-~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~ 168 (348)
.++.+++.+. +++++++++++.+++|+++.+++++ +|||+ +++++.|+++++.|+.++. .+++
T Consensus 81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~------~~~~~~~~~la~~Gv~ll~-~~~~-------- 144 (292)
T PRK11272 81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRT------RKLEWLGIAIGLAGIVLLN-SGGN-------- 144 (292)
T ss_pred HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccC------chhHHHHHHHHHHhHHHHh-cCcc--------
Confidence 7888999999 9999999999999999999999986 69999 6669999999999998775 1110
Q ss_pred ccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccC
Q 018934 169 PAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK 248 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (348)
.+....|+.++++++++||.|.+.. |+..++. +.....+.+..+++.+.+.....+.+... ..
T Consensus 145 ------------~~~~~~G~l~~l~a~~~~a~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 207 (292)
T PRK11272 145 ------------LSGNPWGAILILIASASWAFGSVWS-SRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGERLTA--LP 207 (292)
T ss_pred ------------cccchHHHHHHHHHHHHHHHHHHHH-HhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCCcccc--cC
Confidence 0122469999999999999999999 8865432 44566777778888777776654432211 12
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecc
Q 018934 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK 328 (348)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 328 (348)
+...|..+++.+++++++++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.+
T Consensus 208 ~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 208 TLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999998887644
Q ss_pred c
Q 018934 329 A 329 (348)
Q Consensus 329 ~ 329 (348)
+
T Consensus 288 ~ 288 (292)
T PRK11272 288 Y 288 (292)
T ss_pred h
Confidence 4
No 3
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=3.1e-32 Score=248.30 Aligned_cols=284 Identities=12% Similarity=0.078 Sum_probs=213.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH
Q 018934 9 NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG 88 (348)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (348)
+.++.++++.+.++||.+++..|..+ ++++|..+.++|+.++.+++.++ .. ++ + .+++.++. .+.+.++
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~-~~--~~--~----~~~~~~~~-~~~~~l~ 70 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLT-VG--FP--R----LRQFPKRY-LLAGGLL 70 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHH-cc--cc--c----cccccHHH-HHHHhHH
Confidence 45678889999999999999999996 88999999999999999888766 32 11 1 11112223 3344445
Q ss_pred -HHHHHHHHHhhcc----cChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCcccc
Q 018934 89 -SFFRILGYTGIAY----SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM 163 (348)
Q Consensus 89 -~~~~~~~~~al~~----~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~ 163 (348)
..+..+++.+++| .++++++++.+++|+++.+++++++|||+ ++.++.|+++++.|+.++. .+++..
T Consensus 71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~------~~~~~~g~~l~~~Gv~li~-~~~~~~- 142 (295)
T PRK11689 71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKA------NWLLIPGLLLALAGVAWVL-GGDNGL- 142 (295)
T ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCc------cHHHHHHHHHHHHhHhhee-cCCccc-
Confidence 7888888888764 57788899999999999999999999999 6669999999999998887 221100
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018934 164 STASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLS 243 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (348)
.. ++. ..+..+...|+.++++++++||.|+++. |+..++.+ +..... ..+.+.+.+.....+...
T Consensus 143 ~~--------~~~-~~~~~~~~~G~~~~l~aa~~~A~~~v~~-k~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~~~~- 207 (295)
T PRK11689 143 SL--------AEL-INNIASNPLSYGLAFIGAFIWAAYCNVT-RKYARGKN-GITLFF---ILTALALWIKYFLSPQPA- 207 (295)
T ss_pred hh--------hhh-hhccccChHHHHHHHHHHHHHHHHHHHH-hhccCCCC-chhHHH---HHHHHHHHHHHHHhcCcc-
Confidence 00 000 0001122469999999999999999999 88877766 554422 223333333333332211
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhh
Q 018934 244 AWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT 323 (348)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l 323 (348)
.. .+...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++
T Consensus 208 -~~-~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~ 284 (295)
T PRK11689 208 -MV-FSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL 284 (295)
T ss_pred -cc-CCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence 11 13346777777774 8999999999999999999999999999999999999999999999999999999999888
Q ss_pred heeccc
Q 018934 324 VLWGKA 329 (348)
Q Consensus 324 ~~~~~~ 329 (348)
..+.++
T Consensus 285 ~~~~~~ 290 (295)
T PRK11689 285 CWLATR 290 (295)
T ss_pred HhhhHh
Confidence 866444
No 4
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=9.5e-32 Score=245.66 Aligned_cols=278 Identities=13% Similarity=0.108 Sum_probs=216.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-HHH
Q 018934 13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SFF 91 (348)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 91 (348)
.+..++++++||.++++.|..+ ++++|.++.++|+.++.+.++++ .. ++ + .++ +.....|++. ...
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~-~~--~~--~----~~~---~~~~~~g~~~~~~~ 72 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFF-VA--RP--K----VPL---NLLLGYGLTISFGQ 72 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHH-hc--CC--C----Cch---HHHHHHHHHHHHHH
Confidence 4668889999999999999996 78999999999999987766554 32 22 1 122 2344456655 556
Q ss_pred HHHHHHhhcc-cChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCcc
Q 018934 92 RILGYTGIAY-SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA 170 (348)
Q Consensus 92 ~~~~~~al~~-~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~ 170 (348)
..+++.+++| .++++++++.+++|+++.+++++++|||+ ++.+++|+++++.|+.++. .++.
T Consensus 73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~------~~~~~~~~~l~~~Gv~ll~-~~~~---------- 135 (299)
T PRK11453 73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERL------QGKQLAGIALAIFGVLVLI-EDSL---------- 135 (299)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcC------cHHHHHHHHHHHHhHHHhc-cccC----------
Confidence 6678889998 58899999999999999999999999999 5669999999999998887 2110
Q ss_pred ccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCc--hHHHHHHHHHHHHHHHHHHHHhccCCc---ccc
Q 018934 171 QSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPA--EFVVTLLYCLFATIISAPICFVGESNL---SAW 245 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 245 (348)
.+.+....|+.+++.++++||.|.+.+ |+..++.++ ......+.+..+.+.........+.+. ..+
T Consensus 136 --------~~~~~~~~G~~l~l~aal~~a~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (299)
T PRK11453 136 --------NGQHVAMLGFMLTLAAAFSWACGNIFN-KKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL 206 (299)
T ss_pred --------CCcchhHHHHHHHHHHHHHHHHHHHHH-HHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh
Confidence 011223469999999999999999999 887666542 234445555555444444333333321 111
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 246 RLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
...+...|..++++++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|++|+++..
T Consensus 207 ~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 207 VTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV 286 (299)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence 12234578999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred eccc
Q 018934 326 WGKA 329 (348)
Q Consensus 326 ~~~~ 329 (348)
++++
T Consensus 287 ~~~~ 290 (299)
T PRK11453 287 FGLR 290 (299)
T ss_pred cchh
Confidence 7655
No 5
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=3.8e-31 Score=240.92 Aligned_cols=279 Identities=14% Similarity=0.051 Sum_probs=223.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHH
Q 018934 7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL 86 (348)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (348)
.++.+++.+++++.++|+.++.+.|.++ ++.+|.++.++|+.++.++++++ ... ++ .+.++++++..+..|+
T Consensus 8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~-~~~-~~-----~~~~~~~~~~~~~~g~ 79 (293)
T PRK10532 8 LPVWLPILLLLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAI-FKP-WR-----LRFAKEQRLPLLFYGV 79 (293)
T ss_pred cccchHHHHHHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHH-HhH-Hh-----ccCCHHHHHHHHHHHH
Confidence 4568899999999999999999999997 67999999999999999888776 432 22 1235667888888998
Q ss_pred HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA 166 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~ 166 (348)
+.+..+.++++++++++++.++++..++|+++.+++. ||+ + +..++.+++.|+.++. ..+..
T Consensus 80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~------~--~~~~~~i~~~Gv~li~-~~~~~----- 141 (293)
T PRK10532 80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP------V--DFVWVVLAVLGLWFLL-PLGQD----- 141 (293)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh------H--HHHHHHHHHHHHheee-ecCCC-----
Confidence 8888889999999999999999999999999988762 433 2 3456778899998876 22110
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccc
Q 018934 167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR 246 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (348)
..+....|++++++++++||.|.+.. |+..++.+ +.... +....+++.+.|.....+.. ..+
T Consensus 142 -------------~~~~~~~G~ll~l~aa~~~a~~~v~~-r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~~-~~~- 203 (293)
T PRK10532 142 -------------VSHVDLTGAALALGAGACWAIYILSG-QRAGAEHG-PATVA-IGSLIAALIFVPIGALQAGE-ALW- 203 (293)
T ss_pred -------------cccCChHHHHHHHHHHHHHHHHHHHH-HHHhccCC-chHHH-HHHHHHHHHHHHHHHHccCc-ccC-
Confidence 01123469999999999999999999 88877776 55554 45566666666765543321 111
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934 247 LKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW 326 (348)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 326 (348)
+...+...++++++++.++|.+|++++++.++++++.+.++||+++.+++++++||++++.+++|+++|++|+....+
T Consensus 204 --~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 204 --HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 223566678999999999999999999999999999999999999999999999999999999999999999888876
Q ss_pred ccccc
Q 018934 327 GKAND 331 (348)
Q Consensus 327 ~~~~~ 331 (348)
..++|
T Consensus 282 ~~~~~ 286 (293)
T PRK10532 282 TIRRE 286 (293)
T ss_pred cCCCC
Confidence 55443
No 6
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.98 E-value=2e-30 Score=236.51 Aligned_cols=279 Identities=13% Similarity=0.045 Sum_probs=207.0
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-C-CCchhHHHHHH
Q 018934 5 NSYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASL-P-LFKFPVISRIC 82 (348)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 82 (348)
|++++.++++++++++++|+.+++..|.. ++++|.++.++|+.++.+++.++ ...+++ ++.. + .++++++....
T Consensus 2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (296)
T PRK15430 2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVL-MSICRQ-WSYLKTLIQTPQKIFMLA 77 (296)
T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH-HHHHcc-HHHHHHHHcCHHHHHHHH
Confidence 44678899999999999999999999976 57999999999999999888777 554321 0110 0 11334333333
Q ss_pred HHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCcc
Q 018934 83 FLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPT 161 (348)
Q Consensus 83 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~ 161 (348)
.+.++ +.++.++++|++++++++++++.++.|+++.+++++++|||+ ++.++.|+++++.|+.++. ...
T Consensus 78 -~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~------~~~~~~g~~l~~~Gv~li~-~~~-- 147 (296)
T PRK15430 78 -VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERF------RRMQWLAVILAICGVLVQL-WTF-- 147 (296)
T ss_pred -HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCC------cHHHHHHHHHHHHHHHHHH-HHc--
Confidence 55555 889999999999999999999999999999999999999999 6669999999999998876 110
Q ss_pred ccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccC
Q 018934 162 IMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGES 240 (348)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (348)
.+. ..++++++++||.|.+.. |+..++.. +......+....+.....+. .+.
T Consensus 148 -------------------~~~----~~~~l~aa~~~a~~~i~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 200 (296)
T PRK15430 148 -------------------GSL----PIIALGLAFSFAFYGLVR-KKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADS 200 (296)
T ss_pred -------------------CCc----cHHHHHHHHHHHHHHHHH-HhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccC
Confidence 000 146888999999999999 77654322 22333444444444332221 111
Q ss_pred CccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHh
Q 018934 241 NLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVG 320 (348)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g 320 (348)
....+...+...+..+.+.++ ++.++|.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++|+.|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~ 279 (296)
T PRK15430 201 STSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVA 279 (296)
T ss_pred CcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 111111111112333344454 7789999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhe
Q 018934 321 FYTVL 325 (348)
Q Consensus 321 ~~l~~ 325 (348)
+.+..
T Consensus 280 ~~v~~ 284 (296)
T PRK15430 280 LAIFV 284 (296)
T ss_pred HHHHH
Confidence 66665
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.97 E-value=6e-30 Score=229.39 Aligned_cols=257 Identities=18% Similarity=0.230 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-HHHHHHHHHhhcc
Q 018934 23 IVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SFFRILGYTGIAY 101 (348)
Q Consensus 23 ~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~ 101 (348)
||.+++..|..++++.++.+..+.|...+.+++.++ ... + .++++++.....|.++ .+++.+++.|++|
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~-~~~-~--------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~ 70 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPL-LRR-R--------PPLKRLLRLLLLGALQIGVFYVLYFVAVKR 70 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHh-c--------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999998778999999999999988887766 432 1 2344566777888777 9999999999999
Q ss_pred cChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCC
Q 018934 102 SSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTR 181 (348)
Q Consensus 102 ~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~ 181 (348)
+++++++++.+++|+++.+++++++|||+ +++++.|++++++|+.++. .+++ .
T Consensus 71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~------~~~~~~gi~i~~~Gv~li~-~~~~--------------------~ 123 (260)
T TIGR00950 71 LPVGEAALLLYLAPLYVTLLSDLMGKERP------RKLVLLAAVLGLAGAVLLL-SDGN--------------------L 123 (260)
T ss_pred cChhhhHHHHhhhHHHHHHHHHHHccCCC------cHHHHHHHHHHHHhHHhhc-cCCc--------------------c
Confidence 99999999999999999999999999999 5569999999999998876 2211 1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHH
Q 018934 182 SRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSA 260 (348)
Q Consensus 182 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 260 (348)
+....|+.+++.++++|+.+.+.. |+..++.+ ++.....+.+..+.+++.+.....+++. .. +...+..+++.+
T Consensus 124 ~~~~~G~~~~l~a~~~~a~~~~~~-k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~ 198 (260)
T TIGR00950 124 SINPAGLLLGLGSGISFALGTVLY-KRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLG 198 (260)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHH-hHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHH
Confidence 234579999999999999999999 99887766 2345555778888888888766644322 11 345777889999
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhh
Q 018934 261 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGF 321 (348)
Q Consensus 261 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~ 321 (348)
++++++++.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus 199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999986
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=1.4e-29 Score=231.85 Aligned_cols=286 Identities=15% Similarity=0.078 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 018934 13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFR 92 (348)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 92 (348)
........++-....+.+|.++++...|..+++.|+..+.+...+. .....+ ++ ++.++++++.++..|++.+.+.
T Consensus 4 ~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~~~~~~~~~~g~~~~~~~ 79 (302)
T TIGR00817 4 GLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLP--KR-LKISSALLKLLLPVAIVHTIGH 79 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCC--CC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 4455566666666778899998544779999999999887765544 222112 22 4467889999999999998889
Q ss_pred HHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCcccc
Q 018934 93 ILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQS 172 (348)
Q Consensus 93 ~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~ 172 (348)
.+.+.+++|++++.++++.++.|+++++++++++|||+ ++.++.|+++++.|+.+.. .++
T Consensus 80 ~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~------~~~~~~~l~l~~~Gv~l~~--~~~------------ 139 (302)
T TIGR00817 80 VTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEF------PSTLWLSLLPIVGGVALAS--DTE------------ 139 (302)
T ss_pred HHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHhhhc--CCc------------
Confidence 99999999999999999999999999999999999999 5559999999999997653 111
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhh--cCCchHHHHHHHHHHHHHHHHHHHHhccCCcc---cccc
Q 018934 173 LHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMK--LYPAEFVVTLLYCLFATIISAPICFVGESNLS---AWRL 247 (348)
Q Consensus 173 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 247 (348)
.+....|+.++++++++||+|.+.. |+..+ +.+ +.+...+++..+++.+.|.....++... .+..
T Consensus 140 --------~~~~~~G~~~~l~a~~~~a~~~v~~-k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 209 (302)
T TIGR00817 140 --------LSFNWAGFLSAMISNITFVSRNIFS-KKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQ 209 (302)
T ss_pred --------ccccHHHHHHHHHHHHHHHHHHHHH-HHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence 1223569999999999999999999 88877 555 8899999999999999998776553210 0100
Q ss_pred -----CCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhh
Q 018934 248 -----KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFY 322 (348)
Q Consensus 248 -----~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~ 322 (348)
.....+...+..++.+....+.++++++++.+|++.++..+++|+++++++++++||++++.+++|+++++.|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~ 289 (302)
T TIGR00817 210 AISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVF 289 (302)
T ss_pred hhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHH
Confidence 001112112233332333333566689999999999999999999999999999999999999999999999999
Q ss_pred hheecccccc
Q 018934 323 TVLWGKANDE 332 (348)
Q Consensus 323 l~~~~~~~~~ 332 (348)
++.+.|++|+
T Consensus 290 l~~~~k~~~~ 299 (302)
T TIGR00817 290 LYSRVKAQKP 299 (302)
T ss_pred HHHHHhccCc
Confidence 9987554443
No 9
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=2.2e-26 Score=209.03 Aligned_cols=298 Identities=18% Similarity=0.211 Sum_probs=233.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS 89 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 89 (348)
+..+.-=..+++-.++...+....+.+.+ |....++-+..-.++..++ ..++ ++++.+....+++++++++.+++..
T Consensus 13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~-~~~r-~~~~~~~~~~~~~~w~y~lla~~Dv 90 (334)
T PF06027_consen 13 IVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPI-LLYR-RGFKKWLKVLKRPWWKYFLLALLDV 90 (334)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhh-hhhc-cccccchhhcchhHHHHHHHHHHHH
Confidence 33333444566777777777777545554 6667777777766666666 5554 2112223444567899999999999
Q ss_pred HHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCc
Q 018934 90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 169 (348)
Q Consensus 90 ~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~ 169 (348)
.++++.+.|++|++.+.++++..+.-.++++++++++|||. ++.+++|+++++.|++++...+...
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry------~~~~~~gv~i~i~Gv~lv~~sD~~~-------- 156 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRY------SWFHILGVLICIAGVVLVVVSDVLS-------- 156 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhh------hHHHHHHHHHHHhhhhheeeecccc--------
Confidence 99999999999999999999999999999999999999999 6669999999999999888422211
Q ss_pred cccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCC
Q 018934 170 AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKP 249 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (348)
++++.+.++...|+++++.+++.||.++++. ++..|+.+ ..+..+...+++.++..+...+.|.+... ...+
T Consensus 157 -----~~~~~~~~~~i~GDll~l~~a~lya~~nV~~-E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~-~~~w 228 (334)
T PF06027_consen 157 -----GSDSSSGSNPILGDLLALLGAILYAVSNVLE-EKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIE-SIHW 228 (334)
T ss_pred -----cccCCCCCccchhHHHHHHHHHHHHHHHHHH-HHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhh-ccCC
Confidence 1112234567889999999999999999999 99999988 88899999999999999888888775322 1112
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934 250 DIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 250 ~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
+...........++...-|.+....++..+|+..++-..+..+++.+++++++|+.+++..++|.++|+.|.+++...++
T Consensus 229 ~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 229 TSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES 308 (334)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence 33333344444557777888888999999999999999999999999999999999999999999999999999987655
Q ss_pred ccc
Q 018934 330 NDE 332 (348)
Q Consensus 330 ~~~ 332 (348)
+++
T Consensus 309 ~~~ 311 (334)
T PF06027_consen 309 PEE 311 (334)
T ss_pred ccc
Confidence 443
No 10
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=5.5e-27 Score=212.43 Aligned_cols=274 Identities=12% Similarity=0.050 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934 13 FTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVGSFF 91 (348)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (348)
.+..++++++|+......|... +..++ ..+++...+.+.+.++ ...+ ++ ..++..+++.+......+..+..+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 76 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPY-GLWYLAQ--VGWSRLPATFWLLLAISAVANMVY 76 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHH-HHHhccc--CCCCCcchhhHHHHHHHHHHHHHH
Confidence 4567889999999999999774 44444 3477777777777777 6553 12 221333444444555555555999
Q ss_pred HHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccc
Q 018934 92 RILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ 171 (348)
Q Consensus 92 ~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~ 171 (348)
..+++.+++++++++++++.+++|+++.+++++++|||+ +++++.|+++++.|+.++. .++.
T Consensus 77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~------~~~~~~g~~~~~~Gv~ll~-~~~~----------- 138 (281)
T TIGR03340 77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETL------SPLAWLGILIITLGLLVLG-LSRF----------- 138 (281)
T ss_pred HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHHHHHh-cccc-----------
Confidence 999999999999999999999999999999999999999 6669999999999998876 2111
Q ss_pred cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCch---HHHHHHHHHHHHHHHHHHHHhccCCccccccC
Q 018934 172 SLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAE---FVVTLLYCLFATIISAPICFVGESNLSAWRLK 248 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (348)
......|+.+++.++++|+.|.+.. |+..++.++. .....+.....++...+.....+... +. .
T Consensus 139 ---------~~~~~~g~~~~l~aal~~a~~~i~~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~ 205 (281)
T TIGR03340 139 ---------AQHRRKAYAWALAAALGTAIYSLSD-KAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MF-P 205 (281)
T ss_pred ---------cccchhHHHHHHHHHHHHHHhhhhc-cccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc--hh-h
Confidence 0112347889999999999999998 7765554411 11222222222121122111112111 11 1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhh
Q 018934 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT 323 (348)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l 323 (348)
++..+...++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|+++
T Consensus 206 ~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 206 YARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 223456777888889999999999999999999999999999999999999999999999999999999999875
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=2.3e-26 Score=213.94 Aligned_cols=284 Identities=17% Similarity=0.113 Sum_probs=225.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC--chhHHHHHHHHH
Q 018934 9 NGALFTAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLF--KFPVISRICFLS 85 (348)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g 85 (348)
+.+...+++....+-......+|.++ +.++ |..++.+|++.+.++...+ .....+ ++ ++. .+++++.++..|
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~-~~~~~~--~~-~~~~~~~~~~~~llp~g 121 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLY-WATGFR--KI-PRIKSLKLFLKNFLPQG 121 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHH-HHhCCC--CC-CCCCCHHHHHHHHHHHH
Confidence 56777778888888888889999998 6688 9999999999998876544 333211 11 222 345788999999
Q ss_pred HHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCC
Q 018934 86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST 165 (348)
Q Consensus 86 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~ 165 (348)
+++...+...+.|+++++++.++++..+.|+++++++++++|||+ +++++.++++++.|+.+.. . ++
T Consensus 122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~------s~~~~l~l~l~v~Gv~l~~-~-~~----- 188 (350)
T PTZ00343 122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFL------NLYAYLSLIPIVGGVALAS-V-KE----- 188 (350)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCc------cHHHHHHHHHHHHHHHhee-c-cc-----
Confidence 999666777889999999999999999999999999999999999 5669999999999999987 1 11
Q ss_pred CCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC------chHHHHHHHHHHHHHHHHHHHHhcc
Q 018934 166 ASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP------AEFVVTLLYCLFATIISAPICFVGE 239 (348)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (348)
.+....|++++++++++||++++.. |+..++.+ ++.+...+....++++++|+....|
T Consensus 189 ---------------~~~~~~G~~~~l~s~~~~a~~~i~~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e 252 (350)
T PTZ00343 189 ---------------LHFTWLAFWCAMLSNLGSSLRSIFA-KKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE 252 (350)
T ss_pred ---------------chhHHHHHHHHHHHHHHHHHHHHHH-HHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1224579999999999999999999 88876542 2556666778889999999877665
Q ss_pred CCc--cccc----cCCchhHHHHHHHHHHHHHHHHHHHHH----hhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhh
Q 018934 240 SNL--SAWR----LKPDIELASIVYSAFFGLSFITVVHTF----GLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG 309 (348)
Q Consensus 240 ~~~--~~~~----~~~~~~~~~~l~~~~~~~~~~~~l~~~----a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~ 309 (348)
... ..+. ......+..+++ .++.+++++.+|+. ++++++|...++..+++|+++++++++++||++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~ 331 (350)
T PTZ00343 253 GKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL 331 (350)
T ss_pred hHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence 421 1110 001112233444 45577899999995 999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHhhhhheec
Q 018934 310 SVIGGVITCVGFYTVLWG 327 (348)
Q Consensus 310 ~~iG~~li~~g~~l~~~~ 327 (348)
+++|+++++.|++++.+-
T Consensus 332 ~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 332 GYLGMAVAILGALLYSLF 349 (350)
T ss_pred hHHHHHHHHHHHHHHhhc
Confidence 999999999999988754
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.94 E-value=5e-25 Score=197.05 Aligned_cols=250 Identities=12% Similarity=0.007 Sum_probs=182.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCCCCchh-HHHHHHHHHH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT---ASLPLFKFP-VISRICFLSL 86 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~g~ 86 (348)
|+++++++++++||.++++.|.. ++++|.+++++|+.++.+++.++ ...+++.+ ++.++.+++ .+..+...|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLS-VTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHH-HHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 58899999999999999999984 56999999999999999888776 54432100 010111222 3445777888
Q ss_pred HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA 166 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~ 166 (348)
+.+.++.+++.|++++++++++++.++.|+++++++++++|||+ +++++.++++++.|++++. .. +
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~------~~~~~l~~~~~~~Gv~li~-~~-~------ 144 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERI------SRFQFIAVIIATLGVISNI-VL-K------ 144 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCC------CHHHHHHHHHHHHHHHHHH-HH-c------
Confidence 78999999999999999999999999999999999999999999 6669999999999998775 11 0
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccc
Q 018934 167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR 246 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (348)
.+. ..+++.++++||.|.+.. |+..++ + ....... .........+.....+.... ..
T Consensus 145 --------------~~~----~~~~l~aa~~~a~~~i~~-~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~ 201 (256)
T TIGR00688 145 --------------GSL----PWEALVLAFSFTAYGLIR-KALKNT-D-LAGFCLE-TLSLMPVAIYYLLQTDFATV-QQ 201 (256)
T ss_pred --------------CCc----hHHHHHHHHHHHHHHHHH-hhcCCC-C-cchHHHH-HHHHHHHHHHHHHHhccCcc-cc
Confidence 000 135788999999999999 776543 2 2221111 11111121111111111110 11
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHH
Q 018934 247 LKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIF 301 (348)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~ 301 (348)
..+...|..+++.|++ +.++|.++++++|+.++++++++.+++|+++.+++++.
T Consensus 202 ~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 202 TNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred cCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 1122478888888875 88999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=8.1e-23 Score=185.60 Aligned_cols=282 Identities=21% Similarity=0.261 Sum_probs=214.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHH
Q 018934 7 YKNGALFTAMVAAECTIVGENIIFKLATSKG-MSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLS 85 (348)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 85 (348)
++........+...+.|+.+....|... ++ .++....+.|...+.+...+. ....+. .+ .+..+ .++...+.+
T Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~-~~~~~-~~~~~~~~~ 76 (292)
T COG0697 3 RALLLGLLALLLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPL-LLLEPR--GL-RPALR-PWLLLLLLA 76 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHH-HHhhcc--cc-ccccc-chHHHHHHH
Confidence 3456678888889999999999999996 54 777777777999888884433 222111 11 11111 144555555
Q ss_pred HHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHH-HHhhhcccccccccchhhhHHHHHhhhceeEEEeeCcccc
Q 018934 86 LVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAI-IFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM 163 (348)
Q Consensus 86 ~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~-l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~ 163 (348)
.+. ..+..+++.++++++++.++++.++.|+++.++++ +++|||+ ++.++.++++++.|++++.. .+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~Gv~lv~~-~~~~~- 148 (292)
T COG0697 77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERL------SLLQILGILLALAGVLLILL-GGGGG- 148 (292)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCC------cHHHHHHHHHHHHhHHheec-CCCcc-
Confidence 555 99999999999999999999999999999999997 7779999 66699999999999999982 11100
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHH-HHHHHHHHHHHHHHHhccCCc
Q 018934 164 STASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTL-LYCLFATIISAPICFVGESNL 242 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 242 (348)
... ...|+.+++.++++||.+.+.. |+.. +.+ +..... +..........+. ...+.+
T Consensus 149 ----------------~~~-~~~g~~~~l~a~~~~a~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~- 206 (292)
T COG0697 149 ----------------GIL-SLLGLLLALAAALLWALYTALV-KRLS-RLG-PVTLALLLQLLLALLLLLLF-FLSGFG- 206 (292)
T ss_pred ----------------hhH-HHHHHHHHHHHHHHHHHHHHHH-HHhc-CCC-hHHHHHHHHHHHHHHHHHHH-Hhcccc-
Confidence 001 5689999999999999999999 8777 544 444444 3333222222222 111111
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhh
Q 018934 243 SAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFY 322 (348)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~ 322 (348)
.......+..+.+.+++++++++.++++++++.++..++.+.+++|+++.++++++++|+++..+++|+++++.|+.
T Consensus 207 ---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~ 283 (292)
T COG0697 207 ---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVL 283 (292)
T ss_pred ---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 11234578889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheec
Q 018934 323 TVLWG 327 (348)
Q Consensus 323 l~~~~ 327 (348)
+...+
T Consensus 284 l~~~~ 288 (292)
T COG0697 284 LASLR 288 (292)
T ss_pred HHhcc
Confidence 88765
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.93 E-value=2.7e-23 Score=175.36 Aligned_cols=277 Identities=17% Similarity=0.076 Sum_probs=229.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934 12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF 91 (348)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (348)
++++++.+.+.--....+.|..+ ..+++...+.+|..++.+.++++ + |. .+ .+.+++++..+...|..-+..
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l---~-RP--wr-~r~~~~~~~~~~~yGvsLg~M 84 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLAL---F-RP--WR-RRLSKPQRLALLAYGVSLGGM 84 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHH---h-hH--HH-hccChhhhHHHHHHHHHHHHH
Confidence 67888888887777888999998 88999999999999999888766 2 22 11 456778899999999999999
Q ss_pred HHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccc
Q 018934 92 RILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ 171 (348)
Q Consensus 92 ~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~ 171 (348)
|.+||.+++..|.+.+..+.++.|+.++.++. | +..+..-+.+++.|..++. ..++
T Consensus 85 Nl~FY~si~riPlGiAVAiEF~GPL~vA~~~s---------R---r~~d~vwvaLAvlGi~lL~-p~~~----------- 140 (292)
T COG5006 85 NLLFYLSIERIPLGIAVAIEFTGPLAVALLSS---------R---RLRDFVWVALAVLGIWLLL-PLGQ----------- 140 (292)
T ss_pred HHHHHHHHHhccchhhhhhhhccHHHHHHHhc---------c---chhhHHHHHHHHHHHHhhe-eccC-----------
Confidence 99999999999999999999999999887752 2 4457888888899988887 2221
Q ss_pred cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCch
Q 018934 172 SLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDI 251 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (348)
+....+..|..+++.++.+|+.|.+.. +|..+..+ ...-....+.+++++..|+........ ..++.
T Consensus 141 -------~~~~lDp~Gv~~Al~AG~~Wa~YIv~G-~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~~----l~~p~ 207 (292)
T COG5006 141 -------SVWSLDPVGVALALGAGACWALYIVLG-QRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGPA----LFSPS 207 (292)
T ss_pred -------CcCcCCHHHHHHHHHHhHHHHHHHHHc-chhcccCC-CchHHHHHHHHHHHHHhhhhhhhcchh----hcChH
Confidence 123445679999999999999999999 88887655 677888888999999999876443321 11334
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccc
Q 018934 252 ELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND 331 (348)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 331 (348)
-...-+..+++.+.+.|.+-..++++.+....+.+..+||.++++.+++++||++++.||+|...|+.+..-..+..||+
T Consensus 208 ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~ 287 (292)
T COG5006 208 LLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP 287 (292)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence 56667788999999999999999999999999999999999999999999999999999999999999988777655554
Q ss_pred cc
Q 018934 332 EA 333 (348)
Q Consensus 332 ~~ 333 (348)
..
T Consensus 288 ~~ 289 (292)
T COG5006 288 AV 289 (292)
T ss_pred CC
Confidence 43
No 15
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.91 E-value=7.2e-23 Score=177.47 Aligned_cols=284 Identities=10% Similarity=0.020 Sum_probs=227.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCCCchhHHHHHHHHH
Q 018934 7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTA-SLPLFKFPVISRICFLS 85 (348)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 85 (348)
++..+|+++.+.+.++||..+...|.. +..++.++...|.+.+..+++.+ ....|+.++ +...++++.+..+.+.+
T Consensus 3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~l-l~~~r~~~~~~~~~~~p~~~~~~~l~a 79 (293)
T COG2962 3 KDSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLAL-LFLLRQWRELKQLLKQPKTLLMLALTA 79 (293)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence 446789999999999999999999999 78999999999999999998877 444332111 11245667788888888
Q ss_pred HHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCC
Q 018934 86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST 165 (348)
Q Consensus 86 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~ 165 (348)
.+....+..+.++.+...+-++++=++..|++.++++.+++|||+ ++.++++++++.+||.......|+.
T Consensus 80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErl------s~~Q~iAV~lA~~GV~~~~~~~g~l---- 149 (293)
T COG2962 80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERL------SRLQWIAVGLAAAGVLIQTWLLGSL---- 149 (293)
T ss_pred HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhc------cHHHHHHHHHHHHHHHHHHHHcCCC----
Confidence 888999999999999999999999999999999999999999999 8889999999999998877322211
Q ss_pred CCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 018934 166 ASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAW 245 (348)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (348)
--..+.-+++|+.|-... |+.. . |+.+.....+..-........+..+...+..
T Consensus 150 ----------------------pwval~la~sf~~Ygl~R-K~~~--v-~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~ 203 (293)
T COG2962 150 ----------------------PWVALALALSFGLYGLLR-KKLK--V-DALTGLTLETLLLLPVALIYLLFLADSGQFL 203 (293)
T ss_pred ----------------------cHHHHHHHHHHHHHHHHH-HhcC--C-chHHhHHHHHHHHhHHHHHHHHHHhcCchhh
Confidence 024555677899996665 4431 2 4677777777776666666655554433211
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 246 RLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
...++..+..+...|. .+.++..++..+.++.+-+..+.++|.+|..-.+++++++||+++..+++..++|.+|..++.
T Consensus 204 ~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~ 282 (293)
T COG2962 204 QQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFS 282 (293)
T ss_pred hcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1123446666667777 778999999999999999999999999999999999999999999999999999999999987
Q ss_pred ecccc
Q 018934 326 WGKAN 330 (348)
Q Consensus 326 ~~~~~ 330 (348)
.+.-+
T Consensus 283 ~d~l~ 287 (293)
T COG2962 283 IDGLY 287 (293)
T ss_pred HHHHH
Confidence 65443
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.89 E-value=9.4e-24 Score=179.24 Aligned_cols=292 Identities=16% Similarity=0.109 Sum_probs=215.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934 10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS 89 (348)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 89 (348)
.++.....+.. ++....++.+..+ +.+|.+..-.|+++-.+...+. ..+++. .- --+..+.++++++|+.+.
T Consensus 37 ~~gl~l~~vs~-ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pc-liy~~~--~v--~gp~g~R~~LiLRg~mG~ 108 (346)
T KOG4510|consen 37 NLGLLLLTVSY-FFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPC-LIYYMQ--PV--IGPEGKRKWLILRGFMGF 108 (346)
T ss_pred ccCceehhhHH-HHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheE-EEEEee--ee--ecCCCcEEEEEeehhhhh
Confidence 34444444444 4444445555553 7899999999988887777776 555433 11 122334567899999999
Q ss_pred HHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCc
Q 018934 90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 169 (348)
Q Consensus 90 ~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~ 169 (348)
.+..+.|++++|.+.++|+++..++|.|+.+++|+++|||. ++...++..+.+.|+++++ +.++....+.
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~------t~~eaL~s~itl~GVVLIv--RPpFlFG~~t-- 178 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPF------TKFEALGSLITLLGVVLIV--RPPFLFGDTT-- 178 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCC------cHHHHHHHHHhhheEEEEe--cCCcccCCCc--
Confidence 99999999999999999999999999999999999999999 8889999999999999997 4444322100
Q ss_pred cccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccC-
Q 018934 170 AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK- 248 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (348)
++.+.+.......|...++.++++-|-.+++. |+..|+.+ ......+...++++...+.....+ .+..+
T Consensus 179 ----~g~~~s~~~~~~~gt~aai~s~lf~asvyIil-R~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig----~~~lP~ 248 (346)
T KOG4510|consen 179 ----EGEDSSQVEYDIPGTVAAISSVLFGASVYIIL-RYIGKNAH-AIMSVSYFSLITLVVSLIGCASIG----AVQLPH 248 (346)
T ss_pred ----cccccccccccCCchHHHHHhHhhhhhHHHHH-HHhhcccc-EEEEehHHHHHHHHHHHHHHhhcc----ceecCc
Confidence 00001112333446788888888888888999 88888887 444444555555555444332222 12222
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecc
Q 018934 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK 328 (348)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 328 (348)
....|+.++.+|+ .+.+++.+...++++..+..++++.+...+++.+++++++||.|+++.|.|+++|+.+.+.....|
T Consensus 249 cgkdr~l~~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 249 CGKDRWLFVNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred cccceEEEEEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 3457778888888 556899999999999999999999999999999999999999999999999999999977665444
Q ss_pred cc
Q 018934 329 AN 330 (348)
Q Consensus 329 ~~ 330 (348)
..
T Consensus 328 wa 329 (346)
T KOG4510|consen 328 WA 329 (346)
T ss_pred Hh
Confidence 43
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.87 E-value=4.3e-20 Score=167.58 Aligned_cols=278 Identities=13% Similarity=0.068 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934 12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF 91 (348)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (348)
++++.++++++||.+++..|... +.++.++. |..++.+++..+ ....|+ ++ ...++.+..-++.|++...+
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~-~~~~~~--~~--~~~~~~~~~g~l~G~~w~ig 72 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIA-IAIFVL--PE--FWALSIFLVGLLSGAFWALG 72 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHH-HHHHhC--Cc--ccccHHHHHHHHHHHHHHhh
Confidence 46788999999999999999983 78887775 677777766655 443233 11 12245555566777777899
Q ss_pred HHHHHHhhcccChhhHHhhhh-hhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCcc
Q 018934 92 RILGYTGIAYSSPTLASMIGN-LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA 170 (348)
Q Consensus 92 ~~~~~~al~~~~~~~a~~l~~-~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~ 170 (348)
+.+++.+.++++.+.+..+.+ +++++..+.+.+++|||.+.++ ......|+++.+.|++++.. .++....
T Consensus 73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~-~~~~~~~------ 143 (290)
T TIGR00776 73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSR-SKDKSAG------ 143 (290)
T ss_pred hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEe-ccccccc------
Confidence 999999999999999999988 8999999999999999984431 11229999999999988872 2211000
Q ss_pred ccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHH---HHHHHHHHHHHHHHHHHhccCCcccccc
Q 018934 171 QSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVV---TLLYCLFATIISAPICFVGESNLSAWRL 247 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (348)
..+..+...|..+++.++++|+.|.+.. |.. +++ |.+. ..+..++++.+..+.. . . ..++
T Consensus 144 -------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~-~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~--~-~-~~~~-- 206 (290)
T TIGR00776 144 -------IKSEFNFKKGILLLLMSTIGYLVYVVVA-KAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH--I-L-AKPL-- 206 (290)
T ss_pred -------cccccchhhHHHHHHHHHHHHHHHHHHH-HHc--CCC-cceehhHHHHHHHHHHHHHHHHH--h-c-ccch--
Confidence 0000234669999999999999999999 765 254 6665 4444444444333322 1 1 1111
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhh-cCCceEEeechhhHHHHHHHHHHHHhcCcchhhhh----hhHHHHHHhhh
Q 018934 248 KPDIELASIVYSAFFGLSFITVVHTFGLR-MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFY 322 (348)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~~~~~l~~~a~~-~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~----iG~~li~~g~~ 322 (348)
.+...+..++ .|++ .++++.+|..+.+ +.+++..+.+...+|+.+.+++++++||+.++.++ +|+++|+.|+.
T Consensus 207 ~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~ 284 (290)
T TIGR00776 207 KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN 284 (290)
T ss_pred HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence 1223444444 7887 6899999999999 99999999999999999999999999999999999 99999999987
Q ss_pred hhee
Q 018934 323 TVLW 326 (348)
Q Consensus 323 l~~~ 326 (348)
+...
T Consensus 285 l~~~ 288 (290)
T TIGR00776 285 ILGI 288 (290)
T ss_pred HHhc
Confidence 7643
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.85 E-value=2.2e-19 Score=159.84 Aligned_cols=232 Identities=19% Similarity=0.297 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCc
Q 018934 81 ICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGP 160 (348)
Q Consensus 81 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~ 160 (348)
.+....+.+.+++.+..|+.+++++..+++.+++-+|+.+++.++..||+ ++.|++++++.+.|++++.. ++.
T Consensus 162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~f------t~sKllav~~si~GViiVt~-~~s 234 (416)
T KOG2765|consen 162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERF------TLSKLLAVFVSIAGVIIVTM-GDS 234 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchh------hHHHHHHHHHhhccEEEEEe-ccc
Confidence 33444444999999999999999999999999999999999999999999 66699999999999999984 222
Q ss_pred cccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC---chHHHHHHHHHHHHHHHHHHHHh
Q 018934 161 TIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP---AEFVVTLLYCLFATIISAPICFV 237 (348)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 237 (348)
.. +++........|+++++++++.||.|.++. |+...+.+ |.-.+.++..++..+.+.|..++
T Consensus 235 ~~-------------~~~~~a~~~llG~llaL~sA~~YavY~vll-k~~~~~eg~rvdi~lffGfvGLfnllllwP~l~i 300 (416)
T KOG2765|consen 235 KQ-------------NSDLPASRPLLGNLLALLSALLYAVYTVLL-KRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLII 300 (416)
T ss_pred cc-------------cccCCccchhHHHHHHHHHHHHHHHHHHHH-HhhcccccccccHHHHHHHHHHHHHHHHhHHHHH
Confidence 11 112234556789999999999999999999 77766653 45566677777778888876666
Q ss_pred ccC-CccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHH
Q 018934 238 GES-NLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVI 316 (348)
Q Consensus 238 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~l 316 (348)
.+. ..+.+..+.......++..+++.++++-++|.+|.-..++..+++-+.++.+.+++.+.++-|.++++.+++|.+.
T Consensus 301 L~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~ 380 (416)
T KOG2765|consen 301 LDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIP 380 (416)
T ss_pred HHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 433 2333455566677888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhheeccccccc
Q 018934 317 TCVGFYTVLWGKANDEA 333 (348)
Q Consensus 317 i~~g~~l~~~~~~~~~~ 333 (348)
|++|.+.++.......+
T Consensus 381 Ifv~Fv~vn~~~~~~~~ 397 (416)
T KOG2765|consen 381 IFVGFVIVNISSENSKK 397 (416)
T ss_pred HHHHHhheecccccccc
Confidence 99999998875554433
No 19
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.83 E-value=4e-18 Score=156.01 Aligned_cols=267 Identities=17% Similarity=0.193 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHH
Q 018934 40 YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTF 119 (348)
Q Consensus 40 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ 119 (348)
|..+++.++....+...+. ....++ ++.++..++.+...+++..++..+.+.+++|.|.+.-.++..+.|++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vm 105 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFIL-LSLFKF-----PKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVM 105 (303)
T ss_pred cHHHHHHHHHHHHHHHHHH-HHhccc-----cCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHH
Confidence 8899999998888877666 443231 2233445778888899999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHH
Q 018934 120 ILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLIS 199 (348)
Q Consensus 120 i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a 199 (348)
+++.+++|+|. ++.++.++++..+|+++..+.+....+. .+.+...+..|+.+.+.+.++.|
T Consensus 106 i~~~l~~~k~y------~~~~~~~v~li~~Gv~~~~~~~~~~~~~------------~~~~~~~~~~G~~ll~~sl~~~a 167 (303)
T PF08449_consen 106 ILGVLILGKRY------SRRQYLSVLLITIGVAIFTLSDSSSSSS------------SNSSSFSSALGIILLLLSLLLDA 167 (303)
T ss_pred HHHHHhcCccc------cHHHHHHHHHHHhhHheeeecccccccc------------cccccccchhHHHHHHHHHHHHH
Confidence 99999999988 6669999999999999988422211111 11222333449999999999999
Q ss_pred HHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHh--ccCCccccccC-CchhHHHHHHHHHHHHHHHHHHHHHhh
Q 018934 200 VWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFV--GESNLSAWRLK-PDIELASIVYSAFFGLSFITVVHTFGL 275 (348)
Q Consensus 200 ~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~l~~~a~ 275 (348)
...+.+ ++..++++ ++.+.+.+.+.++.+...+.... .++..+..... ..+.....+..-.+++.+++.+.++..
T Consensus 168 ~~~~~q-e~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~ 246 (303)
T PF08449_consen 168 FTGVYQ-EKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLI 246 (303)
T ss_pred HHHHHH-HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 88888776 68899999999998888877766 32211111100 111233333344447788888889999
Q ss_pred hcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccc
Q 018934 276 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND 331 (348)
Q Consensus 276 ~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 331 (348)
++.++...+++..+.-+++++++++++|+++++.+|+|.++++.|..+....++|+
T Consensus 247 ~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 247 KKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999998877665
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.77 E-value=3.9e-18 Score=153.36 Aligned_cols=291 Identities=14% Similarity=0.141 Sum_probs=227.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHH
Q 018934 10 GALFTAMVAAECTIVGENIIFKLATS--KGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSL 86 (348)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~ 86 (348)
.+..++.....++-.......|..++ +.--|..++..+...+.+..... ...+ ++ .. +..++.++..++..|+
T Consensus 16 ~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~~--~~-~~~~~~~~~~llpl~~ 91 (316)
T KOG1441|consen 16 LRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVI-KVLKLVP--PS-KISSKLPLRTLLPLGL 91 (316)
T ss_pred HHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHH-HHhcCCC--CC-ccccccchHHHHHHHH
Confidence 34445555555666666677899986 55668888888887777777766 5543 33 22 2235567899999999
Q ss_pred HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA 166 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~ 166 (348)
..+++..+.+.++++.+++..+++..++|.+++++++++.+|+.+. ..+..++....|+.+...
T Consensus 92 ~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~------~~~lsL~piv~GV~ias~---------- 155 (316)
T KOG1441|consen 92 VFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSS------MTYLSLLPIVFGVAIASV---------- 155 (316)
T ss_pred HHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcc------eEEEEEEEeeeeEEEeee----------
Confidence 9999999999999999999999999999999999999999999944 477888888888887772
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhh--cCC-chHHHHHHHHHHHHHHHH-HHHHhccCCc
Q 018934 167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMK--LYP-AEFVVTLLYCLFATIISA-PICFVGESNL 242 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 242 (348)
.+.+-+..|...++++.+..++.+++. ++..+ +.+ ++.+...++.-.+...++ |+....+++.
T Consensus 156 ------------~e~~fn~~G~i~a~~s~~~~al~~I~~-~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~ 222 (316)
T KOG1441|consen 156 ------------TELSFNLFGFISAMISNLAFALRNILS-KKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNK 222 (316)
T ss_pred ------------ccccccHHHHHHHHHHHHHHHHHHHHH-HHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccc
Confidence 223445679999999999999999999 88884 344 799999999999999988 8766655543
Q ss_pred cc--cccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHh
Q 018934 243 SA--WRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVG 320 (348)
Q Consensus 243 ~~--~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g 320 (348)
.. ....++......++.. ++...-+..-+..+.+++|...++.....-.+.++.++++++|+.++.+..|+++.+.|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~G 301 (316)
T KOG1441|consen 223 FVGFLTAPWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILG 301 (316)
T ss_pred eeeeeccccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHH
Confidence 20 0001222334444444 45555566667889999999999999999999999999999999999999999999999
Q ss_pred hhhheecccccccc
Q 018934 321 FYTVLWGKANDEAG 334 (348)
Q Consensus 321 ~~l~~~~~~~~~~~ 334 (348)
++++.+.|++++++
T Consensus 302 v~~Y~~~k~~~~~~ 315 (316)
T KOG1441|consen 302 VFLYSRAKLKEKKG 315 (316)
T ss_pred HHHHHHHhhhhhcc
Confidence 99999877766543
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.66 E-value=2.5e-15 Score=114.15 Aligned_cols=135 Identities=16% Similarity=0.131 Sum_probs=121.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVGS 89 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~ 89 (348)
...++.++.+++++...++.|..+ +++||...++.|..+..+++..+ ++.. +. +.....++|.|..+.+.|+.++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v-~~~~g~~--~~~~~~~~k~~lflilSGla~g 78 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIV-LLVTGNW--QAGGEIGPKSWLFLILSGLAGG 78 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHH-HHhcCce--ecccccCcceehhhhHHHHHHH
Confidence 456789999999999999999996 99999999999999999999988 7765 33 2223467888999999998889
Q ss_pred HHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 90 ~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
.++.+||.+++...++.+..+..++|+++++++++++|||+ +..+++|+.+...|++++.
T Consensus 79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~l------s~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERL------SLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCC------CHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999999 5559999999999998876
No 22
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.60 E-value=3.6e-15 Score=126.43 Aligned_cols=258 Identities=14% Similarity=0.083 Sum_probs=200.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHH
Q 018934 38 MSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGF 117 (348)
Q Consensus 38 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~ 117 (348)
-.|...+|..++.-+++..++ +.++|+ . . ...|+.+++.++..+=++++...|.+|++...+..+---....
T Consensus 46 N~Pt~QtFl~Y~LLalVY~~~-~~fR~~---~-~---~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~ 117 (336)
T KOG2766|consen 46 NAPTSQTFLNYVLLALVYGPI-MLFRRK---Y-I---KAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPC 117 (336)
T ss_pred CCccHHHHHHHHHHHHHHhhH-HHhhhH---H-H---HHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHH
Confidence 346677899999999999988 777422 1 1 2236668899988899999999999999999999998888888
Q ss_pred HHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHH
Q 018934 118 TFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLL 197 (348)
Q Consensus 118 ~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 197 (348)
+.+++|+++|.|- ++.++.|+++++.|++.+++. +-. +++..+..+...|+.+.++++-+
T Consensus 118 v~~lsw~fLktrY------rlmki~gV~iCi~GvvmvV~s-DV~-------------agd~aggsnp~~GD~lvi~GATl 177 (336)
T KOG2766|consen 118 VLVLSWFFLKTRY------RLMKISGVVICIVGVVMVVFS-DVH-------------AGDRAGGSNPVKGDFLVIAGATL 177 (336)
T ss_pred HHHHHHHHHHHHH------hhheeeeEEeEecceEEEEEe-eec-------------cccccCCCCCccCcEEEEeccee
Confidence 8899999999977 777999999999999999842 221 11233344556799999999999
Q ss_pred HHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 018934 198 ISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRM 277 (348)
Q Consensus 198 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~ 277 (348)
||..++.. ..+.|+.+ ..+++....++|+++..+. .+.+.+.. ..+.++.+....+. ..++..+-|.+.-..+|.
T Consensus 178 YaVSNv~E-Eflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~-~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~ 252 (336)
T KOG2766|consen 178 YAVSNVSE-EFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHHV-STLHWDSAIFLYLR-FALTMFLLYSLAPILIKT 252 (336)
T ss_pred eeeccccH-HHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhccce-eeEeehHHHHHHHH-HHHHHHHHHHhhHHheec
Confidence 99999999 99999998 8999999999999998888 55554311 11112222233333 344667777777788899
Q ss_pred CCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccc
Q 018934 278 KGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN 330 (348)
Q Consensus 278 ~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~ 330 (348)
.+++-.++-....-.++.++ ..||-+.+|...+..+.+..|.+++..+++.
T Consensus 253 ~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~ 303 (336)
T KOG2766|consen 253 NSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKD 303 (336)
T ss_pred CCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccC
Confidence 99999999888888888888 6678889999999999999998888544443
No 23
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.58 E-value=7.1e-14 Score=106.34 Aligned_cols=136 Identities=17% Similarity=0.110 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHH
Q 018934 187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF 266 (348)
Q Consensus 187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 266 (348)
...+++++++++++..+.. |.-.++.+ |...+.+.......++..+....++. +.....++..|..+...|+ .+++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~-KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~-~~~~~~~~k~~lflilSGl-a~gl 79 (140)
T COG2510 4 AIIYALLSALFAGLTPIFA-KIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNW-QAGGEIGPKSWLFLILSGL-AGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCce-ecccccCcceehhhhHHHH-HHHH
Confidence 5679999999999999999 88888887 88889999888888877776665542 2222225567888888885 8899
Q ss_pred HHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934 267 ITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW 326 (348)
Q Consensus 267 ~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 326 (348)
+..+|++|++..+++++.++.-++|+++++++++++||+++..+++|+.+|.+|.++..+
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999999999999999999887653
No 24
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.53 E-value=6e-13 Score=111.74 Aligned_cols=261 Identities=15% Similarity=0.128 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHH
Q 018934 40 YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTF 119 (348)
Q Consensus 40 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~ 119 (348)
...+++++++...++.=++ ..+ |+ + .+.+.-.-+.+...++...++....+.+++|.|=....+-.+.-|+-++
T Consensus 53 alaLVf~qC~~N~vfAkvl-~~i-r~--~--~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVM 126 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVL-FLI-RK--K--TEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM 126 (337)
T ss_pred HHHHHHHHHHHHHHHHHhh-eee-cc--c--ccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence 3455666666666665444 333 32 1 1122223456666777668889999999999998888888999999999
Q ss_pred HHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHH
Q 018934 120 ILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLIS 199 (348)
Q Consensus 120 i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a 199 (348)
+++.++.+.+.+|| +...++..+.|+.+.. ++...-. +.+..+...|.++.+.+-..-+
T Consensus 127 ilGVl~~~KsY~w~------kY~cVL~IV~GValFm-YK~~Kv~--------------g~e~~t~g~GElLL~lSL~mDG 185 (337)
T KOG1580|consen 127 ILGVLFAHKSYHWR------KYCCVLMIVVGVALFM-YKENKVG--------------GAEDKTFGFGELLLILSLAMDG 185 (337)
T ss_pred eeehhhhcccccHH------HHHHHHHHHHHHHHhh-ccccccC--------------CCcccccchHHHHHHHHHHhcc
Confidence 99999999988554 9999999999999887 5432111 2235566789999999999999
Q ss_pred HHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCC--ccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018934 200 VWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESN--LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLR 276 (348)
Q Consensus 200 ~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~ 276 (348)
+....+ .+..+.+. ....++.+.++.+.+.+..-.+++++. +..+....+..|..+..+++ ++++++++.+.-..
T Consensus 186 lTg~~Q-drira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~ 263 (337)
T KOG1580|consen 186 LTGSIQ-DRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVE 263 (337)
T ss_pred cchhHH-HHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHH
Confidence 998888 66666554 456788888888888776555554432 11111123346677777777 99999999999999
Q ss_pred cCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934 277 MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 277 ~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
..+|..-+++....-.++++.++++++.+++++||+|.++++.|...-....|
T Consensus 264 ~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK 316 (337)
T KOG1580|consen 264 EFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGK 316 (337)
T ss_pred HhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCC
Confidence 99999999999999999999999999999999999999999999887664433
No 25
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.51 E-value=6.5e-12 Score=109.63 Aligned_cols=283 Identities=17% Similarity=0.190 Sum_probs=197.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhcc-C-CCCCCCCchh-HHHHHHHHHH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRS-N-TASLPLFKFP-VISRICFLSL 86 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~-~-~~~~~~~~~~-~~~~~~~~g~ 86 (348)
...+++++..-+.+..--+...-....++ |..++.+..++-.++.... -..++. . +.+ -..+|+ +.+++...|+
T Consensus 15 V~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~-~~l~~~~~~r~r-~~~sw~~~Lr~~aPtal 92 (349)
T KOG1443|consen 15 VLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALS-RRLYQCSVPRAR-VVLSWRDYLRRLAPTAL 92 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHH-HHHHhccCCccc-cCCcHHHHHHHhhhhhh
Confidence 34444455444444433222111123333 7778888887777776655 343321 0 111 234444 4456667888
Q ss_pred HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA 166 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~ 166 (348)
+.++...+.+++++|++.+.-++..+..++|+.+++.+|.-||+ ++.-..-+++...|++++. .+.
T Consensus 93 ata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~------~w~L~l~v~lI~~Glflft-~Ks------- 158 (349)
T KOG1443|consen 93 ATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKF------RWALVLIVLLIAVGLFLFT-YKS------- 158 (349)
T ss_pred hhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHH------HHHHHHHHHHHhhheeEEE-ecc-------
Confidence 88999999999999999999999999999999999999999999 4446777777888888887 333
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC----chHHHHHHHHHHHHHHHHHHHHhccCCc
Q 018934 167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP----AEFVVTLLYCLFATIISAPICFVGESNL 242 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (348)
++-...|..+.+.+.++-++-.... +..+++.+ +|........-...+.++|..+..|+..
T Consensus 159 --------------Tqf~i~Gf~lv~~aS~~sGlRW~~t-Q~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~ 223 (349)
T KOG1443|consen 159 --------------TQFNIEGFFLVLAASLLSGLRWAFT-QMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLH 223 (349)
T ss_pred --------------cceeehhHHHHHHHHHhhhhhHHHH-HHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccc
Confidence 2334569999999999988888888 67666654 6787777777777777888888887642
Q ss_pred cc-----cccCCc-hhHHHHHHHHHHHHHHHHHHHH---HhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhh
Q 018934 243 SA-----WRLKPD-IELASIVYSAFFGLSFITVVHT---FGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIG 313 (348)
Q Consensus 243 ~~-----~~~~~~-~~~~~~l~~~~~~~~~~~~l~~---~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG 313 (348)
.. +...+. ..+..+..++. ++.+++.+-. .-..+++....++.....-+-+.+++..+.+|+++...|.|
T Consensus 224 ~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~G 302 (349)
T KOG1443|consen 224 LITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLG 302 (349)
T ss_pred cchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHH
Confidence 11 211122 12333333332 3333443332 34678899999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhe
Q 018934 314 GVITCVGFYTVL 325 (348)
Q Consensus 314 ~~li~~g~~l~~ 325 (348)
..+...|+.+..
T Consensus 303 l~i~~agi~~~~ 314 (349)
T KOG1443|consen 303 LAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHhc
Confidence 999999999983
No 26
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.51 E-value=2.7e-12 Score=113.15 Aligned_cols=232 Identities=13% Similarity=0.178 Sum_probs=167.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhce
Q 018934 73 FKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAM 152 (348)
Q Consensus 73 ~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 152 (348)
.++++.+.+.+.+++....+.+.|.++++.+|+.-+++.++..+++++++++++|+|+ ++.+|.++.+.+.|+.
T Consensus 12 ~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~l------s~~qW~aL~lL~~Gv~ 85 (244)
T PF04142_consen 12 KSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRL------SRRQWLALFLLVAGVV 85 (244)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHccc------chhhHHHHHHHHHHHh
Confidence 3567789999999999999999999999999999999999999999999999999999 5569999999999998
Q ss_pred eEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHH
Q 018934 153 LVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIIS 231 (348)
Q Consensus 153 li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 231 (348)
++-. ++...... .+..+.+.+.+..+...|....++++++.++..+.. ++..|+.+ +...........+.++.
T Consensus 86 lv~~-~~~~~~~~----~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~-E~~lK~~~~s~~~~N~qL~~~gi~~~ 159 (244)
T PF04142_consen 86 LVQL-SSSQSSDN----SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYF-EKLLKRSNVSLWIQNMQLYLFGILFN 159 (244)
T ss_pred eeec-CCcccccc----ccccccccccccchhHhHHHHHHHHHHHHHHHHHHH-HHHhcccchhHHHHHHHHHHHHHHHH
Confidence 8872 22211110 000001112235667889999999999999999999 99999986 33344555555566655
Q ss_pred HHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhh
Q 018934 232 APICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV 311 (348)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~ 311 (348)
.+.....+.+... ....-..+-...+.-++...++=.+....+|+.+...=+.....+.+++.+.++++++.+++....
T Consensus 160 ~~~~~~~~~~~~~-~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~ 238 (244)
T PF04142_consen 160 LLALLLSDGSAIS-ESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFL 238 (244)
T ss_pred HHHHhcccccccc-cCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHh
Confidence 5554443332100 000001122223333344445555566678888887778888899999999999999999999999
Q ss_pred hhHHHH
Q 018934 312 IGGVIT 317 (348)
Q Consensus 312 iG~~li 317 (348)
+|..++
T Consensus 239 lg~~~V 244 (244)
T PF04142_consen 239 LGAALV 244 (244)
T ss_pred hheecC
Confidence 998653
No 27
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.49 E-value=2.3e-11 Score=107.56 Aligned_cols=289 Identities=12% Similarity=0.080 Sum_probs=210.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH--HHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHH
Q 018934 10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVF--YSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLV 87 (348)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (348)
.++....+.-.+.-..+.++.|..++..-.|..+.. ++.+...+.+... -.. |- ...+..+++..+..+...++
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~l-k~~-~l--v~~~~l~~~~~kk~~P~~~l 86 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVL-KRL-GL--VNFRPLDLRTAKKWFPVSLL 86 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-HHh-ce--eecCCcChHHHHHHccHHHH
Confidence 344444544444555567778998866666666665 8888887777655 333 22 22256778888999999999
Q ss_pred HHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCC
Q 018934 88 GSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS 167 (348)
Q Consensus 88 ~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~ 167 (348)
..+..+.-..+++|.++..-+++.+..|+++++....++|.++ ++..+.++...+.|.....+
T Consensus 87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~------~~~v~~Sv~~m~~~s~~~~~----------- 149 (314)
T KOG1444|consen 87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRP------SNKVWASVFAMIIGSVAAAF----------- 149 (314)
T ss_pred HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCc------hhhHHHHHHHHHHHHHhhcc-----------
Confidence 9888888999999999999999999999999999999999666 66688888888888766651
Q ss_pred CccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCCc---c
Q 018934 168 IPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNL---S 243 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 243 (348)
++......|+.+++...+.-+.+.+.. |+-.+..+ .......+..+.+.........++++.. .
T Consensus 150 -----------~d~sf~~~gY~w~~~n~~~~a~~~v~~-kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~ 217 (314)
T KOG1444|consen 150 -----------TDLSFNLRGYSWALANCLTTAAFVVYV-KKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSL 217 (314)
T ss_pred -----------ccceecchhHHHHHHHHHHHHHHHHHH-HHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHh
Confidence 122333449999999999999999998 76665544 4567788888888887777776665411 1
Q ss_pred ccc-cCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhh
Q 018934 244 AWR-LKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFY 322 (348)
Q Consensus 244 ~~~-~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~ 322 (348)
..+ ......+..+...++ ++..-.++-..+.+..+++..++.....-..+.+-..++++++.++...+|..+-+.|.+
T Consensus 218 ~~~~~~~~~~~~~~~lScv-~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv 296 (314)
T KOG1444|consen 218 NFDNWSDSSVLVVMLLSCV-MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGV 296 (314)
T ss_pred hcccccchhHHHHHHHHHH-HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhh
Confidence 111 111223444444444 555555566688999999999999977777777777777789999999999999999988
Q ss_pred hheecccccc
Q 018934 323 TVLWGKANDE 332 (348)
Q Consensus 323 l~~~~~~~~~ 332 (348)
.+...+.+++
T Consensus 297 ~Y~~~~~~~k 306 (314)
T KOG1444|consen 297 LYSYATFRKK 306 (314)
T ss_pred HHhhhhhhhc
Confidence 8887654443
No 28
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1.5e-11 Score=107.41 Aligned_cols=263 Identities=15% Similarity=0.164 Sum_probs=202.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHH
Q 018934 39 SYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFT 118 (348)
Q Consensus 39 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~ 118 (348)
++..+.+.+.+.+.++-... ..+ ++ +. ...+..++.+...++.+.+...|.|.|++|++--...+-..+--+-+
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~-l~~-~k--~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPV 123 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAM-LKW-WK--KE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPV 123 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHH-Hhc-cc--cc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHH
Confidence 57788888888887777544 333 32 21 22344588899999999999999999999999888888888888888
Q ss_pred HHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHH
Q 018934 119 FILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLI 198 (348)
Q Consensus 119 ~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~ 198 (348)
+++..++.|.|. +..+....++...|+.+..+.+.+. +...+.+.+...|..++...-++-
T Consensus 124 mlmg~Lvy~~ky------~~~eYl~~~LIs~GvsiF~l~~~s~-------------s~~~~g~~ns~~G~~Ll~~~L~fD 184 (327)
T KOG1581|consen 124 MLMGTLVYGRKY------SSFEYLVAFLISLGVSIFSLFPNSD-------------SSSKSGRENSPIGILLLFGYLLFD 184 (327)
T ss_pred HHHHHHHhcCcc------CcHHHHHHHHHHhheeeEEEecCCC-------------CccccCCCCchHhHHHHHHHHHHH
Confidence 899999999988 4458888888999998888542221 111334556778999999999999
Q ss_pred HHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCC-ccc--c-ccCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018934 199 SVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESN-LSA--W-RLKPDIELASIVYSAFFGLSFITVVHTF 273 (348)
Q Consensus 199 a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 273 (348)
++.+..+ .++.++++ .+..++...++.+++..... ++..++ .+. . ...++ .+.-++...+ |+.+++.+-++
T Consensus 185 gfTn~tQ-d~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~-~~~Di~l~s~-~gavGQ~FI~~ 260 (327)
T KOG1581|consen 185 GFTNATQ-DSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPD-VAFDILLYST-CGAVGQLFIFY 260 (327)
T ss_pred hhHHhHH-HHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChh-HHHHHHHHHH-hhhhhhheehh
Confidence 9999999 88887766 68889999999888877665 333321 111 1 11122 3344444444 78899999999
Q ss_pred hhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccc
Q 018934 274 GLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN 330 (348)
Q Consensus 274 a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~ 330 (348)
-+++.++...+.++.+.=.+++.++.+.+|.+.+..||+|..+++.|+.+-...+++
T Consensus 261 TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 261 TIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999887665554
No 29
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.44 E-value=3.4e-12 Score=109.90 Aligned_cols=282 Identities=16% Similarity=0.142 Sum_probs=198.2
Q ss_pred HHHHHHHHHHH---hCC----CCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCC--------CCCC-chhHHHHHHHHHH
Q 018934 24 VGENIIFKLAT---SKG----MSYFVFVFYSYAATTLVLLLLFPFIF-RSNTAS--------LPLF-KFPVISRICFLSL 86 (348)
Q Consensus 24 ~~~~~~~k~~~---~~~----~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~--------~~~~-~~~~~~~~~~~g~ 86 (348)
+.+.++.|++= .++ -+|+..+...++.-++.+.++ .+++ |.+.+. .+.. ++-.....+.-++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf-~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal 94 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVF-KLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPAL 94 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCcccccccccccccCCCCcceecChHH
Confidence 45666777762 112 458888888888888888888 6665 442111 0111 1222344455777
Q ss_pred HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA 166 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~ 166 (348)
|...+..++|.|+.+++++.-+++....-+|+.+++.-+++.++. ..+|.|+.....|++++.. .+-...
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~------~~qWl~i~fv~lGlviVg~-~d~~~~--- 164 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTIT------GRQWLGILFVSLGLVIVGS-LDVHLV--- 164 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccc------hhhHHHHHHHHhhhheeee-eecccc---
Confidence 778889999999999999999999999999999999999999994 4599999999999998873 211110
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhc----cCC
Q 018934 167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVG----ESN 241 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 241 (348)
..+..+.++...|+++.+++-+.-|...++. +|..++.+ +|.+..+|..+++.+.+..++... ..+
T Consensus 165 --------~~p~~d~s~iitGdllIiiaqiivaiQ~v~E-ek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~ 235 (372)
T KOG3912|consen 165 --------TDPYTDYSSIITGDLLIIIAQIIVAIQMVCE-EKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGD 235 (372)
T ss_pred --------cCCccccccchhhhHHHHHHHHHHHHHHHHH-HhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCC
Confidence 1113345667889999999999999999999 88888877 899999999988865554443332 221
Q ss_pred ccccccC----Cch-hHH-----HHHHHHHHHHHHHHHHHH----HhhhcCCceEEeechhhHHHHHHHHHHHHhcCcch
Q 018934 242 LSAWRLK----PDI-ELA-----SIVYSAFFGLSFITVVHT----FGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALH 307 (348)
Q Consensus 242 ~~~~~~~----~~~-~~~-----~~l~~~~~~~~~~~~l~~----~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~ 307 (348)
...-.+. +.. .+. ..++++..+...+..++| .--+..++++-.+...+...+..+++.....|.++
T Consensus 236 sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ 315 (372)
T KOG3912|consen 236 SFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH 315 (372)
T ss_pred cCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence 1000000 000 000 012222223333344444 22466788888999999999999999999999999
Q ss_pred hhhhhhHHHHHHhhhhhe
Q 018934 308 LGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 308 ~~~~iG~~li~~g~~l~~ 325 (348)
..|+.|.++.+.|++++.
T Consensus 316 llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 316 LLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999886
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.44 E-value=4.7e-13 Score=105.74 Aligned_cols=122 Identities=25% Similarity=0.419 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHHHH-HHHHHHHHHh
Q 018934 21 CTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVG-SFFRILGYTG 98 (348)
Q Consensus 21 ~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~a 98 (348)
++|+.+.++.|... ++.||...+++|+..+.+ ++++ .... ++ +. ...+++++......+.+. ..++.+++.+
T Consensus 1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 74 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLIL-LLILGRK--PF-KNLSPRQWLWLLFLGLLGTALAYLLYFYA 74 (126)
T ss_pred ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHH-HHhhccc--cc-cCCChhhhhhhhHhhccceehHHHHHHHH
Confidence 47899999999996 679999999999999998 5555 5544 33 22 456777888889999887 9999999999
Q ss_pred hcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeE
Q 018934 99 IAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV 154 (348)
Q Consensus 99 l~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 154 (348)
+++++++.++++.+++|+++.+++++++||++ ++.++.|+++++.|+.++
T Consensus 75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~------~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 75 LKYISASIVSILQYLSPVFAAILGWLFLGERP------SWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 666999999999998765
No 31
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.42 E-value=3.4e-10 Score=101.69 Aligned_cols=296 Identities=11% Similarity=0.131 Sum_probs=202.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHHHhh-cc-CCCCCC------CCchhHHH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLATSKG---MSYFVFVFYSYAATTLVLLLLFPFIF-RS-NTASLP------LFKFPVIS 79 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~-~~-~~~~~~------~~~~~~~~ 79 (348)
.-++.++...+-++......|..-..+ +.|...++.--++-.++-... ++.. |+ ..+..+ ...+++..
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~-~~~~~~~~~~~~~~~l~~~i~~~~~~~l 93 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFL-LLFEERKYAKKSLKSLSKEILAAPRETL 93 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHH-HHHHhhHHhhhhhhhcCHHHHhChHHHH
Confidence 456778888889999999999885444 667777777776666665544 4433 22 001101 12345677
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeC
Q 018934 80 RICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKG 159 (348)
Q Consensus 80 ~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g 159 (348)
+..+-+++....+.+.|.++.+.+++.-++..++..+-|+++..+++++|+ ++.+|.++++..+|+.++-....
T Consensus 94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkL------s~~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKL------SRLQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHHHHHhccCC
Confidence 788888888888889999999999999999999999999999999999999 66699999999999988752111
Q ss_pred ccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchH-HHHHHHHHHHHHHHHHHHHhc
Q 018934 160 PTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEF-VVTLLYCLFATIISAPICFVG 238 (348)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (348)
+.. ++...........|....+.++...++..++. ++.+|+.+.+. .-.....+++.++...-.+..
T Consensus 168 ~~~-----------~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYf-EkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~ 235 (345)
T KOG2234|consen 168 SPT-----------GAKSESSAQNPFLGLVAVLVACFLSGFAGVYF-EKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ 235 (345)
T ss_pred CCC-----------CccCCCcccchhhhHHHHHHHHHHHHHHHHHH-HHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 110 11112335667789999999999999999999 99998877333 333344444555555444444
Q ss_pred cCCccccccC----CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhH
Q 018934 239 ESNLSAWRLK----PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGG 314 (348)
Q Consensus 239 ~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~ 314 (348)
+.+...|.-. +...|..++..++ +=.+....+|+.+-..=+....+..+++.+.++.+++-+|+....+|.
T Consensus 236 d~~~i~~~gff~G~s~~vw~vVl~~a~-----gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~ 310 (345)
T KOG2234|consen 236 DGEAINEYGFFYGYSSIVWLVVLLNAV-----GGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGA 310 (345)
T ss_pred cccccccCCccccccHHHHHHHHHHhc-----cchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence 4332211100 1223333333333 333333344554444444555678899999999999999999999999
Q ss_pred HHHHHhhhhheecccc
Q 018934 315 VITCVGFYTVLWGKAN 330 (348)
Q Consensus 315 ~li~~g~~l~~~~~~~ 330 (348)
.+++.++.++...+++
T Consensus 311 ~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 311 LLVILSIFLYSLYPAR 326 (345)
T ss_pred HHHHHHHHHhhcCCcc
Confidence 9999999999854443
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.42 E-value=5.5e-13 Score=105.33 Aligned_cols=125 Identities=15% Similarity=0.266 Sum_probs=107.2
Q ss_pred HHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 018934 196 LLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGL 275 (348)
Q Consensus 196 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~ 275 (348)
++||.+.+.. |+..++.+ +.....+.+..+.+ ..+.....+... ....+...+....+.+++++.+++.++++++
T Consensus 1 ~~~a~~~~~~-k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 75 (126)
T PF00892_consen 1 FSWAIYSVFS-KKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL 75 (126)
T ss_pred ceeeeHHHHH-HHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence 3688899999 99999987 99999999999987 666655555432 2222455777888888888899999999999
Q ss_pred hcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 276 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 276 ~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
++.+++.++++.+++|+++.++++++++|++++.+++|+.+++.|+++..
T Consensus 76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987753
No 33
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.22 E-value=5.6e-10 Score=99.89 Aligned_cols=133 Identities=17% Similarity=0.258 Sum_probs=110.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHH
Q 018934 7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSY--FVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFL 84 (348)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (348)
..+.++.+++++++++|+......|... ++.++ .....+++..+.+++.++ ....++ + +..+.+++...+..
T Consensus 124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~--~--~~~~~~~~~~~~~~ 197 (260)
T TIGR00950 124 SINPAGLLLGLGSGISFALGTVLYKRLV-KKEGPELLQFTGWVLLLGALLLLPF-AWFLGP--N--PQALSLQWGALLYL 197 (260)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhHHh-hcCCchHHHHHHHHHHHHHHHHHHH-HHhcCC--C--CCcchHHHHHHHHH
Confidence 3456899999999999999999999995 66664 455557788888888877 665322 1 22356677778888
Q ss_pred HHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhc
Q 018934 85 SLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGA 151 (348)
Q Consensus 85 g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv 151 (348)
+.++ ..++.++++++++.+++.++.+.++.|+++.++++++++|++ +..++.|+.+.+.|+
T Consensus 198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~------~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETL------SLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHhc
Confidence 8887 899999999999999999999999999999999999999999 666999999999986
No 34
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.14 E-value=1.7e-08 Score=89.01 Aligned_cols=251 Identities=13% Similarity=0.119 Sum_probs=168.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhh-hhhH
Q 018934 39 SYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFK--FPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIG-NLTP 115 (348)
Q Consensus 39 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~-~~~P 115 (348)
+|.+-.+--...+.++-+.. .+. ++ +..+ .+.+...++.|++...++...+.++++.+++.+-.+. ..+-
T Consensus 11 ~~~~Q~lG~t~Gali~alv~-~~~-~~-----p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QL 83 (269)
T PF06800_consen 11 KPANQILGTTIGALIFALVV-FLF-RQ-----PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQL 83 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHH-HHH-hC-----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHH
Confidence 44444444444444444444 333 33 3333 4788999999999999999999999999999999996 5888
Q ss_pred HHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHH
Q 018934 116 GFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISN 195 (348)
Q Consensus 116 ~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~ 195 (348)
+.+.+++.++++|--+.++ -.....++++.++|+.+.. .+++..+ ..++..+...|....+++.
T Consensus 84 vg~sl~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~lts-~~~~~~~-------------~~~~~~~~~kgi~~Ll~st 147 (269)
T PF06800_consen 84 VGTSLIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVILTS-YQDKKSD-------------KSSSKSNMKKGILALLIST 147 (269)
T ss_pred HHHHHHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHHhc-ccccccc-------------ccccccchhhHHHHHHHHH
Confidence 8899999999999443321 1223557888888887776 2222111 1122456678999999999
Q ss_pred HHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 018934 196 LLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGL 275 (348)
Q Consensus 196 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~ 275 (348)
++|..|.+.. +... .+ +.....-+.+.-.+....+....+... . ....|.. +..|+ .-.++..++..+.
T Consensus 148 igy~~Y~~~~-~~~~--~~-~~~~~lPqaiGm~i~a~i~~~~~~~~~--~---~k~~~~n-il~G~-~w~ignl~~~is~ 216 (269)
T PF06800_consen 148 IGYWIYSVIP-KAFH--VS-GWSAFLPQAIGMLIGAFIFNLFSKKPF--F---EKKSWKN-ILTGL-IWGIGNLFYLISA 216 (269)
T ss_pred HHHHHHHHHH-HhcC--CC-hhHhHHHHHHHHHHHHHHHhhcccccc--c---ccchHHh-hHHHH-HHHHHHHHHHHhH
Confidence 9999998888 5532 22 555444333332332233322221111 1 2223333 33344 3346888899999
Q ss_pred hcCCceEEeechhhHHHHHHHHHHHHhcCcchhh----hhhhHHHHHHhhhh
Q 018934 276 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG----SVIGGVITCVGFYT 323 (348)
Q Consensus 276 ~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~----~~iG~~li~~g~~l 323 (348)
++.+.+..-.+..+..+++.+.+.+++||+=+.. ..+|.++++.|.++
T Consensus 217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999987755 45788888887654
No 35
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.12 E-value=1e-10 Score=90.99 Aligned_cols=103 Identities=21% Similarity=0.335 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHH
Q 018934 45 FYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAI 123 (348)
Q Consensus 45 ~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~ 123 (348)
.+|++.+.+++..+ ...+++.++..+..+.+.+.+....|.++ ..++.++++|+++.+ +.++++.+++|+++.++++
T Consensus 2 a~r~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~ 79 (113)
T PF13536_consen 2 AFRYLFSVLFLLII-LLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW 79 (113)
T ss_pred HHHHHHHHHHHHHH-HHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence 57999999998888 66642200111233445567778888888 699999999999999 5889999999999999999
Q ss_pred HHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 124 IFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 124 l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
+++|||+ ++.++.++++++.|++++.
T Consensus 80 ~~~~er~------~~~~~~a~~l~~~Gv~li~ 105 (113)
T PF13536_consen 80 LFFKERL------SPRRWLAILLILIGVILIA 105 (113)
T ss_pred HHhcCCC------CHHHHHHHHHHHHHHHHHh
Confidence 9999999 5559999999999999987
No 36
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.10 E-value=3.4e-10 Score=97.44 Aligned_cols=282 Identities=15% Similarity=0.134 Sum_probs=193.5
Q ss_pred HHHHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCC--CCchhHHHHHHHHHHHHHHHHHHHHH
Q 018934 26 ENIIFKLATSKG----MSYFVFVFYSYAATTLVLLLLFPFIFRSN--TASLP--LFKFPVISRICFLSLVGSFFRILGYT 97 (348)
Q Consensus 26 ~~~~~k~~~~~~----~~p~~~~~~r~~~~~l~l~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~ 97 (348)
.....|+.++.. -.|...+++++++...+-..+ ....++. +...+ +.+.+..+...-..+........-.+
T Consensus 43 ~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~l-s~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnl 121 (347)
T KOG1442|consen 43 LVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVL-SSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNL 121 (347)
T ss_pred hhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHH-HHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccce
Confidence 345567776331 358888898888776654444 3332221 01111 23444455555555555566666778
Q ss_pred hhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCC
Q 018934 98 GIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTP 177 (348)
Q Consensus 98 al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~ 177 (348)
+++|.+++.-.+=.++..+|++++.++++|+|. +.....++++.+.|-.+-. +.+
T Consensus 122 cL~yVgVaFYyvgRsLttvFtVlLtyvllkqkT------s~~~~~~C~lIi~GF~lGv--dqE----------------- 176 (347)
T KOG1442|consen 122 CLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKT------SFFALGCCLLIILGFGLGV--DQE----------------- 176 (347)
T ss_pred ehhhcceEEEEeccchhhhHHHHhHHhhccccc------ccccceeehhheehheecc--ccc-----------------
Confidence 999999999999999999999999999999988 4446666666666643332 111
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCCccccc--cCCc-hhH
Q 018934 178 QSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWR--LKPD-IEL 253 (348)
Q Consensus 178 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~ 253 (348)
+.++.-...|.+++..+.++-|+..+.. |+...... .-..++.+....+.+..+|...+.++-...+. ..+. ..|
T Consensus 177 ~~~~~ls~~GvifGVlaSl~vAlnaiyt-kk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw 255 (347)
T KOG1442|consen 177 GSTGTLSWIGVIFGVLASLAVALNAIYT-KKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFW 255 (347)
T ss_pred cccCccchhhhHHHHHHHHHHHHHHHhh-heecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHH
Confidence 1123445679999999999999999999 76654444 34578889999999999998777554222121 1122 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccccc
Q 018934 254 ASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEA 333 (348)
Q Consensus 254 ~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~~ 333 (348)
..+...|+++-.++|.. .+-+|..+|.+.++-....-..-.++++.+++|.-+..-|-|-.++++|...+++-|+.+.+
T Consensus 256 ~~mtLsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~ 334 (347)
T KOG1442|consen 256 ILMTLSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMR 334 (347)
T ss_pred HHHHHHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHH
Confidence 44445555444444333 24578899999999999999999999999999999999999999999999999987666554
Q ss_pred cC
Q 018934 334 GK 335 (348)
Q Consensus 334 ~~ 335 (348)
++
T Consensus 335 ~~ 336 (347)
T KOG1442|consen 335 KA 336 (347)
T ss_pred hh
Confidence 43
No 37
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.04 E-value=2.7e-09 Score=97.39 Aligned_cols=138 Identities=9% Similarity=0.054 Sum_probs=110.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccc--cCCchhHHHHHHHH
Q 018934 183 RWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR--LKPDIELASIVYSA 260 (348)
Q Consensus 183 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ 260 (348)
+...|..+.+.+++.|+...+.. |.. .+.+ |.+...+++.++.+++.+......+ ..... ..+...+ .....+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~-k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 79 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYF-KLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVS 79 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHH-HHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHH
Confidence 45679999999999999999999 765 5666 9999999999998877776544322 11100 0011222 223356
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 261 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 261 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
.++.+..+.++++++++.+++.++++.++.|++..++++++++|+++..+++|.++.+.|+.+..
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 66778899999999999999999999999999999999999999999999999999999988765
No 38
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.03 E-value=3.1e-09 Score=87.17 Aligned_cols=138 Identities=16% Similarity=0.214 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcC-----C-chHHHHHHHHHHHHHHHHHHHHhccCCcccc---ccC------Cch
Q 018934 187 GGLLLLISNLLISVWYIIQQTQTMKLY-----P-AEFVVTLLYCLFATIISAPICFVGESNLSAW---RLK------PDI 251 (348)
Q Consensus 187 G~~~~l~a~~~~a~~~v~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~ 251 (348)
|..+++.+.++.|++.+.. |+..++. + ++.+...+....+.+.+.|.....|+..... ... ...
T Consensus 1 G~~~~l~s~~~~al~~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 79 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLI-KKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPN 79 (153)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHH
Confidence 5789999999999999999 8877772 3 7999999999999999999988877642111 000 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934 252 ELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW 326 (348)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 326 (348)
.+..++..|+ ....-....+..+++.+|...++...+..+..++.+++++||++++.+++|.++.++|.+++.+
T Consensus 80 ~~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 80 FIFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 3344444444 4556677777889999999999999999999999999999999999999999999999988754
No 39
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.03 E-value=6.1e-09 Score=94.41 Aligned_cols=133 Identities=14% Similarity=0.100 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHH
Q 018934 188 GLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFI 267 (348)
Q Consensus 188 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 267 (348)
..+.+.++++||...+.. |+..++.+ +. ..+....+++...|....... ...|... +..+......+.+.....
T Consensus 3 ~~~~~~aa~~~a~~~~~~-k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 76 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMA-KSHADKEP-DF--LWWALLAHSVLLTPYGLWYLA-QVGWSRL-PATFWLLLAISAVANMVY 76 (281)
T ss_pred HHHHHHHHHHHHHHHHHH-hhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCc-chhhHHHHHHHHHHHHHH
Confidence 468899999999999999 87777654 43 344555566666666554211 1223222 223444444555578889
Q ss_pred HHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934 268 TVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW 326 (348)
Q Consensus 268 ~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 326 (348)
+.++++++++.+++.++++.+++|+++.++++++++|+++..+++|..+++.|+++...
T Consensus 77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999887764
No 40
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.02 E-value=5.6e-09 Score=85.82 Aligned_cols=214 Identities=15% Similarity=0.172 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCC
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA 166 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~ 166 (348)
+..+.++.|..+++..++++++.+..+..-|+.+++++.+|+|+ ...++.+.++++.|++++. +.+
T Consensus 62 ~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~------~~~kIlaailAI~GiVmia-y~D------- 127 (290)
T KOG4314|consen 62 FWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRF------MGFKILAAILAIGGIVMIA-YAD------- 127 (290)
T ss_pred EEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccch------hhhhHHHHHHHhCcEEEEE-ecc-------
Confidence 34688999999999999999999999999999999999999999 6669999999999998887 322
Q ss_pred CCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHH-----HHHHHHHHHhccCC
Q 018934 167 SIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFA-----TIISAPICFVGESN 241 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 241 (348)
++..+.++|..++..++...|+|-+.- |......+ --....++...+ .....++.+...+
T Consensus 128 ------------N~~a~e~iGi~~AV~SA~~aAlYKV~F-K~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~- 192 (290)
T KOG4314|consen 128 ------------NEHADEIIGIACAVGSAFMAALYKVLF-KMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILAFTG- 192 (290)
T ss_pred ------------chhhhhhhhHHHHHHHHHHHHHHHHHH-HHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHHhc-
Confidence 223456789999999999999999988 88776655 111111111111 1222222222211
Q ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhh
Q 018934 242 LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGF 321 (348)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~ 321 (348)
.+.|+.-....|..+...+.+... -..+.+.++....|...++-+....+--.+.+.++-+-..+...+.|-.+|+.|.
T Consensus 193 VE~~qsFA~~PWG~l~G~A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F 271 (290)
T KOG4314|consen 193 VEHLQSFAAAPWGCLCGAAGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF 271 (290)
T ss_pred hHHHHHHhhCCchhhhhHHHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 122321122346665555553443 3455567888889999999888888899999999877788899999999999998
Q ss_pred hhheecccc
Q 018934 322 YTVLWGKAN 330 (348)
Q Consensus 322 ~l~~~~~~~ 330 (348)
.+...+..+
T Consensus 272 iLiiiP~d~ 280 (290)
T KOG4314|consen 272 ILIIIPEDK 280 (290)
T ss_pred Hheecccch
Confidence 888765443
No 41
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.96 E-value=2.9e-08 Score=90.53 Aligned_cols=134 Identities=9% Similarity=0.054 Sum_probs=107.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH
Q 018934 9 NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG 88 (348)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (348)
...|.++.+.++++|+......|+.. +..++..... -...+.+++.++ .... . .. ...++..+...+..|++.
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~-~~~~~~~~~~-~~~~~~~~l~~~-~~~~-~--~~-~~~~~~~~~~~l~lgv~~ 218 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAG-AEHGPATVAI-GSLIAALIFVPI-GALQ-A--GE-ALWHWSILPLGLAVAILS 218 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHh-ccCCchHHHH-HHHHHHHHHHHH-HHHc-c--Cc-ccCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999994 6777877654 445566666666 5542 1 11 223445555667888888
Q ss_pred -HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 89 -SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 89 -~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
.+++.++++++++.++++++++..++|++..++++++++|++ +..+++|..+.+.|++...
T Consensus 219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~------~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETL------TLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999 6669999999999987775
No 42
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.94 E-value=9.4e-08 Score=82.77 Aligned_cols=263 Identities=12% Similarity=0.085 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhH-HhhhhhhHHHHH
Q 018934 41 FVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLA-SMIGNLTPGFTF 119 (348)
Q Consensus 41 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a-~~l~~~~P~~~~ 119 (348)
..+++-++++...--+++ .- +-...+ ++.+.+++ ...-......+.+-++++++--+--- -++..-.++-++
T Consensus 34 NLITFaqFlFia~eGlif-~s--kf~~~k-~kiplk~Y---~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM 106 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIF-TS--KFFTVK-PKIPLKDY---AITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANM 106 (330)
T ss_pred eehHHHHHHHHHHhceee-ec--cccccC-CCCchhhh---heehheeeeeeeeccceeeecccceEEEEEecCcHHHHH
Confidence 455665655554444444 21 110012 44444433 33333346667777788888744444 344667999999
Q ss_pred HHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHH
Q 018934 120 ILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLIS 199 (348)
Q Consensus 120 i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a 199 (348)
++++++.|.|- +..|..++++..+|+++..+.+.+..+.- .....+++..++...|.+|..+...+.+..|
T Consensus 107 ~~g~il~~k~Y------s~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~---~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa 177 (330)
T KOG1583|consen 107 ILGWILLGKRY------SLRQYSSVLMITIGIIICTLFSSKDGRSK---LSGLDSGSAQSDFFWWLIGIALLVFALLLSA 177 (330)
T ss_pred HHHHHhcccee------ehhhhhhHHhhhhhheeEEeecCcchhhh---hcccccCcccccchHHHHHHHHHHHHHHHHH
Confidence 99999999977 55699999999999999986554433320 0011112234556788999999999988888
Q ss_pred HHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCC----------cccccc-----CCchhHHHHHHHHHHH
Q 018934 200 VWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESN----------LSAWRL-----KPDIELASIVYSAFFG 263 (348)
Q Consensus 200 ~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-----~~~~~~~~~l~~~~~~ 263 (348)
...+.+ +..-+|++ ++.+.+++..+++....+. ..++ .+.... .-+..|.+++...+ .
T Consensus 178 ~mgiyq-E~~Y~kyGKh~~EalFytH~LsLP~Flf----~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~ 251 (330)
T KOG1583|consen 178 YMGIYQ-ETTYQKYGKHWKEALFYTHFLSLPLFLF----MGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-T 251 (330)
T ss_pred HHHHHH-HHHHHHhcCChHHHHHHHHHhccchHHH----hcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-H
Confidence 888888 88777776 8889999998876654432 2221 000000 01224444444333 2
Q ss_pred HHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 264 LSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 264 ~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
.-.+.--.+..-.+.++..++++..+.=.++.+++.+.+..++++..|+|.++++.|..++.
T Consensus 252 Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 252 QYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 22222223334567788899999999999999999999999999999999999999977765
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.94 E-value=1.1e-08 Score=91.34 Aligned_cols=135 Identities=10% Similarity=0.099 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCc---cccccCCchh-HHHHHHHHHH
Q 018934 187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNL---SAWRLKPDIE-LASIVYSAFF 262 (348)
Q Consensus 187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~l~~~~~ 262 (348)
|..+.++++++|+...+.. |. ..+.+ |.+...++++++++++.+......+.. ..++...... +..+...|+
T Consensus 3 g~~~~i~a~~~wg~~~~~~-k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 78 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYS-KL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL- 78 (256)
T ss_pred cHHHHHHHHHHHHHHHHHH-HH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence 7889999999999999999 87 45566 999999999999888776654433211 1111111222 333445555
Q ss_pred HHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 263 GLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 263 ~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
..+..+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999999999999999987664
No 44
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.92 E-value=4e-08 Score=84.76 Aligned_cols=227 Identities=14% Similarity=0.138 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEE
Q 018934 77 VISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL 156 (348)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 156 (348)
.|+.+...+.+......+...++.|.+=....+...+--+-+++.+.++-+.|- ++.+..+..+..+|.++..+
T Consensus 105 P~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY------~v~d~~aA~lm~lGli~FTL 178 (367)
T KOG1582|consen 105 PWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRY------GVHDYIAAMLMSLGLIWFTL 178 (367)
T ss_pred chhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccc------cHHHHHHHHHHHHHHHhhhh
Confidence 366777777777777888888888887665566666666666777777766654 88899999999999999884
Q ss_pred eeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHH
Q 018934 157 YKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPIC 235 (348)
Q Consensus 157 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (348)
.+.. .+++-...|....-.|-++-|.---++ ++.++..+ +..++..+...++.+.+....
T Consensus 179 ADs~------------------~sPNF~~~Gv~mIsgALl~DA~iGNvQ-Ek~m~~~~~ss~EmvfySy~iG~vflf~~m 239 (367)
T KOG1582|consen 179 ADSQ------------------TSPNFNLIGVMMISGALLADAVIGNVQ-EKAMKMNPASSSEMVFYSYGIGFVFLFAPM 239 (367)
T ss_pred cccc------------------cCCCcceeeHHHHHHHHHHHHHhhHHH-HHHHhhCCCCcceEEEeeecccHHHHHHHH
Confidence 3222 233445678888888888888887888 88888877 456777777788888777666
Q ss_pred HhccCCcccccc---CCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhh
Q 018934 236 FVGESNLSAWRL---KPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVI 312 (348)
Q Consensus 236 ~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~i 312 (348)
..+++-+..|.. .+.....+....+. .+.++......-++..++..++.+....-.+++++++++|..+++....-
T Consensus 240 vlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~ 318 (367)
T KOG1582|consen 240 VLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVW 318 (367)
T ss_pred HhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhh
Confidence 666654444421 12223344444444 55567777777788999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhhheeccc
Q 018934 313 GGVITCVGFYTVLWGKA 329 (348)
Q Consensus 313 G~~li~~g~~l~~~~~~ 329 (348)
|..+++.|+++....++
T Consensus 319 ~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 319 SGLLVVLGIYLNMYSKR 335 (367)
T ss_pred hhHHHHHHHHhhcccCC
Confidence 99999999999887664
No 45
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.91 E-value=4.3e-08 Score=89.36 Aligned_cols=136 Identities=15% Similarity=0.038 Sum_probs=110.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH
Q 018934 9 NGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG 88 (348)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (348)
...+.++.+.++++|+......|.. .. -++.....++...+.+.+.++ ...... ......+.+.+..+...++++
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~~l~i~~ 222 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRL-PL-PVGMMAGAAEMLAAGVVLLIA-SLLSGE--RLTALPTLSGFLALGYLAVFG 222 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhc-CC-CcchHHHHHHHHHHHHHHHHH-HHHcCC--cccccCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999997 23 345566778888888877776 554211 110113456788888888887
Q ss_pred -HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 89 -SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 89 -~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
..++.++++++++.++++++++..+.|++++++++++++|++ +..+++|..+.+.|+.+..
T Consensus 223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~------t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETL------SPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999 6669999999999997765
No 46
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.89 E-value=2e-08 Score=79.38 Aligned_cols=122 Identities=19% Similarity=0.167 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHH
Q 018934 187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF 266 (348)
Q Consensus 187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 266 (348)
|.++.+.+.++-+..+++- |+-.++.+ ..+.... . ...+ . .. . .+ ...++.|++++++
T Consensus 3 ~~~~i~~sv~l~~~gQl~~-K~g~~~~g-~~~~~~~-~-~~~~---~-~~-----~------~p---~~~i~lgl~~~~l 60 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSL-KWGMSRLP-LLSHAWD-F-IAAL---L-AF-----G------LA---LRAVLLGLAGYAL 60 (129)
T ss_pred cHHHHHHHHHHHHHHHHHH-HHHHhhCC-CccchhH-H-HHHH---H-HH-----h------cc---HHHHHHHHHHHHH
Confidence 7788888988889999999 88888766 2221111 0 0000 0 00 0 00 1247888889999
Q ss_pred HHHHHHHhhhcCCceEEeechhhHHHHHHHHHHH--HhcCcchhhhhhhHHHHHHhhhhheecccc
Q 018934 267 ITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFI--FLSEALHLGSVIGGVITCVGFYTVLWGKAN 330 (348)
Q Consensus 267 ~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~--~~~e~~~~~~~iG~~li~~g~~l~~~~~~~ 330 (348)
++.+|++++++.+++.+.++....+++..+.++. ++||++++.+++|.++|++|+++..+.+++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999998888888875 899999999999999999999998765443
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.86 E-value=3.9e-07 Score=82.81 Aligned_cols=229 Identities=14% Similarity=0.201 Sum_probs=125.6
Q ss_pred HHHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeC
Q 018934 81 ICFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKG 159 (348)
Q Consensus 81 ~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g 159 (348)
.++.|++. ..+..+.+.++.+.|.+..+.+....-++.++++..++|||+ ++.++.|+.+++.|..++.. .+
T Consensus 52 ~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~------~~~~~~G~~l~i~G~~liv~-~~ 124 (300)
T PF05653_consen 52 LWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKL------TRRDIVGCALIILGSVLIVI-FA 124 (300)
T ss_pred HHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccc------hHhHHhhHHHHHhhheeeEE-eC
Confidence 34555555 778889999999999999999999999999999999999999 66699999999999988874 33
Q ss_pred ccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-chHH---HHHHHHHHH--HHHHHH
Q 018934 160 PTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP-AEFV---VTLLYCLFA--TIISAP 233 (348)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~---~~~~~~~~~--~~~~~~ 233 (348)
+..+...+.+ +..+ .-.++.+. .+....... ...+..... ++..++.. -... ..+-....+ ++....
T Consensus 125 ~~~~~~~t~~-~l~~---~~~~~~fl-~y~~~~~~~-~~~L~~~~~-~r~g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i 197 (300)
T PF05653_consen 125 PKEEPIHTLD-ELIA---LLSQPGFL-VYFILVLVL-ILILIFFIK-PRYGRRNILVYISICSLIGSFTVLSAKAISILI 197 (300)
T ss_pred CCCCCcCCHH-HHHH---HhcCccee-hhHHHHHHH-HHHHHHhhc-chhcccceEEEEEEeccccchhhhHHHHHHHHH
Confidence 3221110000 0000 00001111 111111111 111221112 22221111 0000 001001110 011111
Q ss_pred HHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhH-HHHHHHHHHHHhcCc--chh--
Q 018934 234 ICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLS-IAIAAITSFIFLSEA--LHL-- 308 (348)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~-pv~a~~~~~~~~~e~--~~~-- 308 (348)
-..+ +++ .+. ..+..|..+ ...+.+...-....|+++++.+++.+.++.+.. ...+++-+.++++|. .++
T Consensus 198 ~~~~-~g~-~~f--~~~~~y~l~-~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~ 272 (300)
T PF05653_consen 198 KLTF-SGD-NQF--TYPLTYLLL-LVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQ 272 (300)
T ss_pred HHHh-cCc-hhh--hhhHHHHHH-HHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHH
Confidence 1111 111 111 122233333 333446667777888999999999998877655 455566667777864 334
Q ss_pred --hhhhhHHHHHHhhhhheecc
Q 018934 309 --GSVIGGVITCVGFYTVLWGK 328 (348)
Q Consensus 309 --~~~iG~~li~~g~~l~~~~~ 328 (348)
....|+.+++.|+++....|
T Consensus 273 ~~~~~~G~~~ii~GV~lL~~~~ 294 (300)
T PF05653_consen 273 IIGFLCGFLIIIIGVFLLSSSK 294 (300)
T ss_pred HHHHHHHHHHHHHhhheeeccC
Confidence 34577888899988886533
No 48
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.84 E-value=9.1e-08 Score=87.35 Aligned_cols=132 Identities=17% Similarity=0.197 Sum_probs=102.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934 10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS 89 (348)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 89 (348)
..|.++++.++++|+...+..|.. .++.++..... ..+.+.+.+. ... .+ ......+++.+..++..++...
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~-~~~-~~--~~~~~~~~~~~~~l~~~~~~t~ 226 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIK-YFL-SP--QPAMVFSLPAIIKLLLAAAAMG 226 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHH-HHH-hc--CccccCCHHHHHHHHHHHHHHH
Confidence 458899999999999999999998 46677765432 2233333332 222 22 1112345666777777776558
Q ss_pred HHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 90 ~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
.++.+++.++++.+++.++.+.++.|++..++++++++|++ +..+++|.++.+.|+.+..
T Consensus 227 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~------~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 227 FGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPL------SFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHhHHHHh
Confidence 99999999999999999999999999999999999999999 6669999999999987765
No 49
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.81 E-value=1.5e-07 Score=87.76 Aligned_cols=137 Identities=13% Similarity=0.182 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCC-CCCCCchhHHHHHHHHHHHH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTA-SLPLFKFPVISRICFLSLVG 88 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~g~~~ 88 (348)
.+.+.++.++++|+.+.++.|....+.-++...+++....+.+...+. .... +.+.. +....+.. ....+..++..
T Consensus 189 lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t 266 (358)
T PLN00411 189 IGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMI-GLVVEKNNPSVWIIHFDIT-LITIVTMAIIT 266 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHH-HHHHccCCcccceeccchH-HHHHHHHHHHH
Confidence 377889999999999999999886333344455666666666665555 4442 22001 11112222 22344445545
Q ss_pred HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 89 SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 89 ~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
.+++.++++++++.+++.+++..++.|++++++++++++|++ +..+++|.++.+.|+.+..
T Consensus 267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~l------t~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSL------YLGCLIGGILITLGFYAVM 327 (358)
T ss_pred HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHHHHH
Confidence 678889999999999999999999999999999999999999 5569999999999998876
No 50
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.80 E-value=2.9e-06 Score=77.88 Aligned_cols=301 Identities=13% Similarity=0.070 Sum_probs=177.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH----Hhh-ccCCCCCCCCchhHHHHHH
Q 018934 8 KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFP----FIF-RSNTASLPLFKFPVISRIC 82 (348)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~----~~~-~~~~~~~~~~~~~~~~~~~ 82 (348)
+-..+++.++++.++|+..+.-.|+. +.-+ +|..+. +.+. +...++. .+. +.-.+.....+.+.+...+
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~-wE~~W~--v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~ 77 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKKV--KKWS-WETMWS--VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF 77 (345)
T ss_pred hhHHHHHHHHHHHHHhhccccccccc--CCCc-hhHHHH--HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence 45679999999999999999999995 4333 222211 1111 1111101 010 1100111235677788889
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhccc-ccccccchhhhHHHHHhhhceeEEEeeCc
Q 018934 83 FLSLVGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLA-LSSLSTWAKIIGTLVSVSGAMLVVLYKGP 160 (348)
Q Consensus 83 ~~g~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~-~~~~~~~~~~~g~~l~~~Gv~li~~~~g~ 160 (348)
+.|++...++..++.++++.+.+.+..+ ..++-+...++..++++|=.+ ..++-......|+++.++|+.+.. ..|.
T Consensus 78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s-~Ag~ 156 (345)
T PRK13499 78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVG-RAGQ 156 (345)
T ss_pred HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHH-Hhhh
Confidence 9999999999999999999999999887 469999999999999886320 111124456888999999998887 3111
Q ss_pred cccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHH-------HHHhhhhh-hcCCchHHHHH---HHHHHHHH
Q 018934 161 TIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWY-------IIQQTQTM-KLYPAEFVVTL---LYCLFATI 229 (348)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~-~~~~~~~~~~~---~~~~~~~~ 229 (348)
..+.. .+....++.+...|..+++++.++++.|+ ... +... ...+ +..... ..++++..
T Consensus 157 ~k~~~--------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~-~~a~~~g~~-~~~~~lp~~~~~~~G~~ 226 (345)
T PRK13499 157 LKERK--------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMH-EAAAALGVD-PLYAALPSYVVIMGGGA 226 (345)
T ss_pred hcccc--------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchh-hhhhhcCCC-chHHHHHHHHHHHHHHH
Confidence 10000 00000235677889999999999999998 444 2211 1122 222222 12223333
Q ss_pred H-HHHHHHh---ccCCcccc--ccCCchhHHHH----HHHHHHHHHHHHHHHHHhhhcCCceEEee---ch-hhHHHHHH
Q 018934 230 I-SAPICFV---GESNLSAW--RLKPDIELASI----VYSAFFGLSFITVVHTFGLRMKGPVYTAI---FK-PLSIAIAA 295 (348)
Q Consensus 230 ~-~~~~~~~---~~~~~~~~--~~~~~~~~~~~----l~~~~~~~~~~~~l~~~a~~~~~~~~~~~---~~-~l~pv~a~ 295 (348)
. ...++.. ..++.... ...+...+..- ...|+ .=.+++.++..+.++.+...... +. .+.-+++.
T Consensus 227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist 305 (345)
T PRK13499 227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN 305 (345)
T ss_pred HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence 2 2333332 11111101 00011111222 23333 33456667777777776554444 44 66668899
Q ss_pred HHHHHHhcCcch------hhhhhhHHHHHHhhhhheec
Q 018934 296 ITSFIFLSEALH------LGSVIGGVITCVGFYTVLWG 327 (348)
Q Consensus 296 ~~~~~~~~e~~~------~~~~iG~~li~~g~~l~~~~ 327 (348)
+++.+ +||.=+ ...++|.++++.|..+...+
T Consensus 306 lwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 306 LWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred Hhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 99995 999766 55689999999997776543
No 51
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.67 E-value=7.2e-08 Score=74.85 Aligned_cols=107 Identities=15% Similarity=0.261 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHH
Q 018934 222 LYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIF 301 (348)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~ 301 (348)
+....+.+..........+..+.++......+...+..|.+....++.+++++.++.++ .++++..+.|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555553332111221122345666676776777899999999999995 88899999999999999999
Q ss_pred hcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934 302 LSEALHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 302 ~~e~~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
++|++++.+++|..++++|+.+..+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999877543
No 52
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.65 E-value=8.4e-08 Score=80.48 Aligned_cols=262 Identities=14% Similarity=0.152 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHH
Q 018934 41 FVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFI 120 (348)
Q Consensus 41 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i 120 (348)
+.+.+.+.+...+-++.+ -+.+ - -..+.++.+..+...++-....+....+++|.++..-++..++..+.++.
T Consensus 38 flll~vQSlvcvv~l~iL-k~l~-~-----~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAy 110 (309)
T COG5070 38 FLLLAVQSLVCVVGLLIL-KFLR-L-----VEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAY 110 (309)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHh-H-----hheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHh
Confidence 345566666555555444 2222 1 11123334444555555666666777899999999999999999999999
Q ss_pred HHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 018934 121 LAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISV 200 (348)
Q Consensus 121 ~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~ 200 (348)
...+++|.|. +-.....-++.+...+... .+|.... .......+.|++++..-++.-|.
T Consensus 111 gEvl~Fgg~v------tsl~l~SFilMvlSS~va~--w~D~q~~-------------~~~~~~lN~GY~Wm~~Nclssaa 169 (309)
T COG5070 111 GEVLFFGGRV------TSLELLSFILMVLSSVVAT--WGDQQAS-------------AFKAQILNPGYLWMFTNCLSSAA 169 (309)
T ss_pred hHHHHhcCcc------chhhHHHHHHHHHHHHHhc--cchhhHH-------------HHHhcccCCceEEEehhhHhHHH
Confidence 9999999988 5556666666665544433 1111000 01123456699999999999899
Q ss_pred HHHHHhhhhhhcCC-chHHHHHHHHHHHHHHHHHHHHhccCCc-cccccCCch-hHHHHHHHHHHHHHHHHHHHHHhhhc
Q 018934 201 WYIIQQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNL-SAWRLKPDI-ELASIVYSAFFGLSFITVVHTFGLRM 277 (348)
Q Consensus 201 ~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~l~~~~~~~~~~~~l~~~a~~~ 277 (348)
+...- |+..+-.+ ....-+++..+++..+++....++|+.. .......+. ...+...-|+ |++.--++-.++.|.
T Consensus 170 fVL~m-rkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~svgiSy~saWcvrV 247 (309)
T COG5070 170 FVLIM-RKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSVGISYCSAWCVRV 247 (309)
T ss_pred HHHHH-HHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHhhhhhccceeEee
Confidence 88777 55444333 3677889999999999888888876532 211111111 2223333344 666666677789999
Q ss_pred CCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccccc
Q 018934 278 KGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE 332 (348)
Q Consensus 278 ~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~ 332 (348)
.+.+.-+++..+.-.-..+.|.++++|+.+...+....+=..+..++...+.+++
T Consensus 248 tSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 248 TSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred hhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887776666555554444433
No 53
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.61 E-value=3.8e-07 Score=79.66 Aligned_cols=211 Identities=12% Similarity=0.052 Sum_probs=123.6
Q ss_pred hhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccC---CCCCcc-c-cCCCCCCC
Q 018934 105 TLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS---TASIPA-Q-SLHWTPQS 179 (348)
Q Consensus 105 ~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~---~~~~~~-~-~~~~~~~~ 179 (348)
.......+..++++++..+.+.+||. +..++.+.++...|++...+.+.+.... ..+... + ++..+...
T Consensus 5 Pa~~~~~s~~l~~v~l~~~~~~~~~~------~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~ 78 (222)
T TIGR00803 5 PIHIIFKQNNLVLIALGNLLAAGKQV------TQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTL 78 (222)
T ss_pred cchHHHHhcchHHHHHhcccccceee------ehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccc
Confidence 33455567788888888888888877 4457888887777766433211110000 000000 0 00000011
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchH-HHHHHHHHHHHHHHHHHHHhccCCc-cccccCCchhHHHHH
Q 018934 180 TRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEF-VVTLLYCLFATIISAPICFVGESNL-SAWRLKPDIELASIV 257 (348)
Q Consensus 180 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 257 (348)
..++...|....+.+..+-++..+.+ ++..|+.+... .-.......+.+.........+.+. ..+. .-..+....
T Consensus 79 ~~g~~~~g~~~~l~a~~~~~~~~~y~-e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 155 (222)
T TIGR00803 79 MFGNPVVGLSAVLSALLSSGFAGVYF-EKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFG--FFIGYPTAV 155 (222)
T ss_pred ccccHHHHHHHHHHHHHHHhhhHHHH-HHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccC--cccCCchHH
Confidence 23456678887888888878888888 77666544111 1111112222222121111111111 1111 001112222
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhh
Q 018934 258 YSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTV 324 (348)
Q Consensus 258 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~ 324 (348)
+.-+++...+..+....+|+.++...+....++++++.+++++++||++++.+++|+.+++.|++++
T Consensus 156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 2333456677888889999999999999999999999999999999999999999999999997653
No 54
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.61 E-value=1.7e-06 Score=70.76 Aligned_cols=136 Identities=21% Similarity=0.343 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCC-CC--C-----Cchh
Q 018934 12 LFTAMVAAECTIVGENIIFKLATSK------GMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTAS-LP--L-----FKFP 76 (348)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~-~~--~-----~~~~ 76 (348)
|.+.++.+.++.+...+..|..+++ ..++.++..+....+.+++.+. .... +..... .. . .+.+
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~ 79 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPL-AFLLEGPQLSSFFSEIFGEELSSDPN 79 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHH-HHHHhhhhhhhHHHHhhhhhhcchHH
Confidence 4577889999999999999999855 7999999999999999999998 7765 221000 00 0 0335
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeE
Q 018934 77 VISRICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV 154 (348)
Q Consensus 77 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 154 (348)
.+..++..|++....+...+..+++++|...+++.....+.+.++++++++|++ +..++.|+.+++.|+.+-
T Consensus 80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~------t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPI------TPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcC------CHHHHHHHHHHHHHHhee
Confidence 566777777777999999999999999999999999999999999999999999 666999999999998653
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.60 E-value=1.3e-06 Score=79.99 Aligned_cols=138 Identities=19% Similarity=0.154 Sum_probs=103.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHHHHHHHHHhh-ccCC--CCCCCCchhHHHHHHH
Q 018934 10 GALFTAMVAAECTIVGENIIFKLATSKGMSY---FVFVFYSYAATTLVLLLLFPFIF-RSNT--ASLPLFKFPVISRICF 83 (348)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p---~~~~~~r~~~~~l~l~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~ 83 (348)
..|.++++.++++|+...+..|... +..++ .....+-...+.+.+... .... .... ......+.+.+..++.
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIM-SHSTRPAVMSLVVWSALIPIIPFFVA-SLILDGSATMIHSLVTIDMTTILSLMY 219 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cccCccchhHHHHHHHHHHHHHHHHH-HHHhcCchhhhhhhccCCHHHHHHHHH
Confidence 4689999999999999999999974 33332 233343444443333333 2222 1100 0002345677888889
Q ss_pred HHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 84 LSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 84 ~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
.|++. ...+.+++.++++.++++++.+..+.|++..++++++++|++ +..+++|..+.+.|+.+..
T Consensus 220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~------~~~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERL------TGLQFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCc------cHHHHHHHHHHHHHHHHHh
Confidence 99888 899999999999999999999999999999999999999999 6669999999999997665
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.51 E-value=8e-07 Score=81.42 Aligned_cols=138 Identities=19% Similarity=0.221 Sum_probs=104.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC--------CchhHH
Q 018934 9 NGALFTAMVAAECTIVGENIIFKLATSK--GMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL--------FKFPVI 78 (348)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~--------~~~~~~ 78 (348)
+..|.+++++++++|+...+..|... + +.+|.....+....+.+++.++ ....... ..... ......
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~p~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 219 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAM-TIKSLDKTNLYAYISIMSLFLLSPP-AFITEGP-PFLPHGFMQAISGVNVTKI 219 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCcccHHHHHHHHHHHHHHHH-HHHHcch-HHHHHHHHHhhcccCchHH
Confidence 45688999999999999999999985 5 7999999999999999998888 6653110 10000 010111
Q ss_pred HH-HHHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 79 SR-ICFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 79 ~~-~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
.. .+..+... ...+.+.+.+++++++..+++.....|+++.++++++++|++ +..+++|..+.+.|+.+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~l------t~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 220 YTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKI------SPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCC------chhHHHHHHHHHHHHHHHH
Confidence 11 22333322 444567778999999999999999999999999999999999 5569999999999987654
No 57
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.47 E-value=7.1e-07 Score=68.80 Aligned_cols=68 Identities=12% Similarity=0.004 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 258 YSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 258 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
..++++.++++.++..++++.+.+.+.++..+.++++.+++++++||++++.+++|.+++++|+.+..
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 34446788999999999999999999999999999999999999999999999999999999987764
No 58
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.41 E-value=2.3e-06 Score=75.22 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccc-cCCchhHHHHHHHHHHH
Q 018934 185 VIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR-LKPDIELASIVYSAFFG 263 (348)
Q Consensus 185 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 263 (348)
..|.++++.|-+.|+...... +..+..+ +.++...+.+.+...+........+....++ ...+..+......+. -
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~--kll~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~-l 81 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYF--KLLEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL-L 81 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHH--HHHccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH-H
Confidence 359999999999999887776 6667777 8899999999988887776655543222222 123335555555555 4
Q ss_pred HHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheec
Q 018934 264 LSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG 327 (348)
Q Consensus 264 ~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 327 (348)
.+..+.+|.++.++.+..++|.-.++.|++.+++|.++++|+++..|++...+..+|+....+.
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999998877653
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.37 E-value=9.5e-06 Score=75.84 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccC-CchhHHHHHHHHHHHHH
Q 018934 187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK-PDIELASIVYSAFFGLS 265 (348)
Q Consensus 187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~ 265 (348)
-..+.+.--.+-..++... |...+..+.|.++..+++..+.+...+. +...... ..+.. ....+..++.+|++..
T Consensus 50 ~~~~~~~wy~~s~~~~~~n-K~vl~~~~~P~~l~~~~~~~~~l~~~~~-~~~~~~~-~~~~~~~~~~~~~llp~gl~~~- 125 (350)
T PTZ00343 50 LALLFLTWYALNVLYVVDN-KLALNMLPLPWTISSLQLFVGWLFALLY-WATGFRK-IPRIKSLKLFLKNFLPQGLCHL- 125 (350)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHH-HHhCCCC-CCCCCCHHHHHHHHHHHHHHHH-
Confidence 3334443344445566777 8888888779999999999987765544 2222111 01111 2235667777787554
Q ss_pred HHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934 266 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW 326 (348)
Q Consensus 266 ~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 326 (348)
..+...+.++++.+++.+.++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 4577777999999999999999999999999999999999999999999999999888763
No 60
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.34 E-value=5.6e-06 Score=75.30 Aligned_cols=132 Identities=10% Similarity=0.013 Sum_probs=100.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934 10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGS 89 (348)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 89 (348)
.++.++.+++.++++.+....|.. +.+|...++.....-.+.-..+ ....++ .+ +. +.+..+..++.|++..
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~-~~~~~~--~~-~~-~~~~~~~~~~~Gi~~~ 222 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIF-NLGHIL--AK-PL-KKYAILLNILPGLMWG 222 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHH-HHHHhc--cc-ch-HHHHHHHHHHHHHHHH
Confidence 679999999999999999999976 4888888666655222222222 111122 11 22 2334455566888889
Q ss_pred HHHHHHHHhhc-ccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhh----hHHHHHhhhceeEE
Q 018934 90 FFRILGYTGIA-YSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKI----IGTLVSVSGAMLVV 155 (348)
Q Consensus 90 ~~~~~~~~al~-~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~li~ 155 (348)
.++.+++.+.+ +.+++.++++.+..|+...+.+++++||+.+.+ ++ +|.++.+.|+.++.
T Consensus 223 ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 223 IGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 99999999999 999999999999999999999999999999554 67 99999999887765
No 61
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.26 E-value=1.8e-05 Score=70.46 Aligned_cols=279 Identities=16% Similarity=0.158 Sum_probs=157.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHH
Q 018934 6 SYKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLS 85 (348)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 85 (348)
..++..|.+..+...++.+.+..+-|+...+ ... . .. |......+.. + -..+..|
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~-----~---~~--ra~~gg~~yl--~--~~~Ww~G 70 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGA-----S---GL--RAGEGGYGYL--K--EPLWWAG 70 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhh-----h---cc--cccCCCcchh--h--hHHHHHH
Confidence 3456667777777777777777777776411 100 0 11 2100100112 1 1345567
Q ss_pred HHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccC
Q 018934 86 LVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMS 164 (348)
Q Consensus 86 ~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~ 164 (348)
++. .++..+-|.|+.+.|.+..+.+..++-+..++++..++|||+ ++...+|++++++|-.+++ ...|..+.
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl------~~~g~lGc~l~v~Gst~iV-~haP~e~~ 143 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKL------NLLGILGCVLCVVGSTTIV-IHAPKEQE 143 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHH------HHhhhhheeEEecccEEEE-EecCcccc
Confidence 777 888899999999999999999999999999999999999999 5559999999999999998 44443332
Q ss_pred CCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC--chHHHHHHHHHHHHH-HHHH------HH
Q 018934 165 TASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYP--AEFVVTLLYCLFATI-ISAP------IC 235 (348)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~------~~ 235 (348)
..+..... .-- .+..++.-..+.+... .++. -....++. +.+........++.. ++.. +-
T Consensus 144 i~t~~el~---~~~-~~~~Fliy~~~iil~~------~il~-~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aik 212 (335)
T KOG2922|consen 144 IESVEEVW---ELA-TEPGFLVYVIIIILIV------LILI-FFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIK 212 (335)
T ss_pred cccHHHHH---HHh-cCccHHHHHHHHHHHH------HHHh-eeecccccccceeehhhHhhhhcceeeeeHHHHHHHHH
Confidence 20000000 000 0111221111211111 1111 11111222 233333333333211 1100 00
Q ss_pred HhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhh-HHHHHHHHHHHHhcCcch--h----
Q 018934 236 FVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPL-SIAIAAITSFIFLSEALH--L---- 308 (348)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l-~pv~a~~~~~~~~~e~~~--~---- 308 (348)
....++.+ ...+..|..++.+.. |...-..-.++|++..+++.++++.+. -..+++.-+.+++.|.-. .
T Consensus 213 lt~~g~~q---l~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~ 288 (335)
T KOG2922|consen 213 LTFSGNNQ---LFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIA 288 (335)
T ss_pred HHhcCCcc---cccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 11111111 112344555544444 555556667799999999998877665 456677778888887433 3
Q ss_pred hhhhhHHHHHHhhhhheeccccc
Q 018934 309 GSVIGGVITCVGFYTVLWGKAND 331 (348)
Q Consensus 309 ~~~iG~~li~~g~~l~~~~~~~~ 331 (348)
....|+..++.|+++....|+++
T Consensus 289 ~~~~Gf~ti~~G~flL~~~kd~~ 311 (335)
T KOG2922|consen 289 GELCGFVTIFLGIFLLHRTKDME 311 (335)
T ss_pred HHHHhHHHhhheeeEeeeecccc
Confidence 35678899999999887655544
No 62
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.25 E-value=3.2e-05 Score=69.86 Aligned_cols=132 Identities=17% Similarity=0.214 Sum_probs=103.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH
Q 018934 10 GALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVF-YSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG 88 (348)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (348)
..+..+.+.+.++|+.+....|... ..++..... +..........+. .... .. .....+.+......|+++
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~-~~~~~~~~~~~~~~g~~~ 224 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLF---FLSG--FG-APILSRAWLLLLYLGVFS 224 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHH---Hhcc--cc-ccCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999884 666666666 3333122222211 1111 11 234567788899999999
Q ss_pred -HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 89 -SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 89 -~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
..++.+++.+++..+++.++.+..+.|++..++++++++|++ +..++.|+++.+.|+.+..
T Consensus 225 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~------~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 225 TGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPL------SPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCC------cHHHHHHHHHHHHHHHHHh
Confidence 679999999999999999999999999999999999999999 5569999999999987765
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.22 E-value=1.1e-05 Score=62.18 Aligned_cols=68 Identities=13% Similarity=0.061 Sum_probs=60.1
Q ss_pred HHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 82 CFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 82 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
...++++ ..+..++..+++..|.+.+..+.++.++++.+++++++|||+ +..+++|+.+.+.|++++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~l------s~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPV------SPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHh
Confidence 3344455 889999999999999999999988999999999999999999 5569999999999997765
No 64
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.21 E-value=7e-07 Score=76.24 Aligned_cols=276 Identities=12% Similarity=0.066 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934 12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF 91 (348)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (348)
.++..++-++.|+....+..+. +=.|.+.+.-.-+.+.++...+ .+. .. |..+.+.+..-++.|++...+
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv-~~~-~~-----p~~T~~~~iv~~isG~~Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIV-FLF-VS-----PELTLTIFIVGFISGAFWSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHH-hee-ec-----CccchhhHHHHHHhhhHhhhh
Confidence 4566788889999998877665 4456665554444444444433 332 22 556777788888888888999
Q ss_pred HHHHHHhhcccChhhHHhhhh-hhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCcc
Q 018934 92 RILGYTGIAYSSPTLASMIGN-LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPA 170 (348)
Q Consensus 92 ~~~~~~al~~~~~~~a~~l~~-~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~ 170 (348)
+...+.+.++.+++.+..+.. ++-+-+-+++.+.++|=.+..+ -.....++++.+.|+.+-. .+++.
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs-~~~~~--------- 140 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTS-KQDRN--------- 140 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEee-eeccc---------
Confidence 999999999999999999965 8889999999999999432211 1122455677777876666 22221
Q ss_pred ccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCc
Q 018934 171 QSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPD 250 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (348)
++...+.+....|....+.+.++|-.|.++. +...-+.-+...-....+..+++.+. ...+. ...+
T Consensus 141 ----nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~-~~f~v~g~saiLPqAiGMv~~ali~~---~~~~~------~~~~ 206 (288)
T COG4975 141 ----NKEEENPSNLKKGIVILLISTLGYVGYVVLF-QLFDVDGLSAILPQAIGMVIGALILG---FFKME------KRFN 206 (288)
T ss_pred ----cccccChHhhhhheeeeeeeccceeeeEeee-ccccccchhhhhHHHHHHHHHHHHHh---hcccc------cchH
Confidence 1112234456779999999999999997777 55542211233333344444444322 11111 0122
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhh----hhHHHHHHhhhhh
Q 018934 251 IELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFYTV 324 (348)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~----iG~~li~~g~~l~ 324 (348)
.....-+.-|+.. +.+...+..+.++.+.++.=-+.-+.-+++.+=+.++++|+=+..++ +|..+++.|..+.
T Consensus 207 K~t~~nii~G~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l 283 (288)
T COG4975 207 KYTWLNIIPGLIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL 283 (288)
T ss_pred HHHHHHHhhHHHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence 2223333445434 35778888888888888888888888899999999999999887754 6778888775443
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.08 E-value=0.0002 Score=65.81 Aligned_cols=141 Identities=16% Similarity=0.045 Sum_probs=109.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHH
Q 018934 7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLS 85 (348)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g 85 (348)
.+..+|-+.++.+++++|.+.+.-+... ++.++.++..+--+++.++..+. +... +++.+. ...+++....++..+
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq-~~ile~~~i~~-~~w~~~~~~~~v~~~ 240 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQ-LAILERSGIES-IHWTSQVIGLLVGYA 240 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHH-HHheehhhhhc-cCCChhhHHHHHHHH
Confidence 4678999999999999999999999996 77889998888888888887766 5544 442222 223444444444444
Q ss_pred HHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEE
Q 018934 86 LVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL 156 (348)
Q Consensus 86 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 156 (348)
++....+.+.-..+++++++...+=.-+..++..++..+++++++ ++..++|.++.++|.++...
T Consensus 241 ~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~------~~ly~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 241 LCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKF------SWLYILAFALIIIGFVVYNL 305 (334)
T ss_pred HHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccc------cHHHHHHHHHHHHHhheEEc
Confidence 444677777788899999987777677899999999999999999 66699999999999988873
No 66
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.03 E-value=9.4e-05 Score=65.47 Aligned_cols=135 Identities=13% Similarity=0.043 Sum_probs=101.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHH
Q 018934 7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL 86 (348)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (348)
.+..|+.+.+++.++.+..+..+.|.. +.+|....+-..+.-.+.-.++ ....++ + ...+..+.-++.|+
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~-~~~~~~-----~-~~~k~~~~nil~G~ 203 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIF-NLFSKK-----P-FFEKKSWKNILTGL 203 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHH-hhcccc-----c-ccccchHHhhHHHH
Confidence 355789999999999999988887775 6888887776655444444434 333222 1 12233566688899
Q ss_pred HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhcee
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML 153 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 153 (348)
+...++.+++.+.+....+.+-.+.++..+...+-+.+++||+-+.|+ -...+.|+++.+.|.++
T Consensus 204 ~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke--~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 204 IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE--MIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh--HHHHHHHHHHHHHhhhc
Confidence 889999999999999999999999999999999999999999875543 34456777777777654
No 67
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.99 E-value=0.0002 Score=61.78 Aligned_cols=136 Identities=11% Similarity=0.040 Sum_probs=112.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHH
Q 018934 7 YKNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLS 85 (348)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g 85 (348)
.-.-.|..+.+.+..+|+.+.+..|.. .+..|.-.-+..-+.++.++.+|+ ..-+ .. -..++......+..+
T Consensus 144 ~lDp~Gv~~Al~AG~~Wa~YIv~G~r~-g~~~~g~~g~a~gm~vAaviv~Pi-g~~~ag~-----~l~~p~ll~laLgva 216 (292)
T COG5006 144 SLDPVGVALALGAGACWALYIVLGQRA-GRAEHGTAGVAVGMLVAALIVLPI-GAAQAGP-----ALFSPSLLPLALGVA 216 (292)
T ss_pred cCCHHHHHHHHHHhHHHHHHHHHcchh-cccCCCchHHHHHHHHHHHHHhhh-hhhhcch-----hhcChHHHHHHHHHH
Confidence 345678899999999999999999999 346666667788888999999999 7654 22 234566677788888
Q ss_pred HHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 86 LVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 86 ~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
++. .+.+.+=..+++..|...-+++.++.|.+.++.++++++|++ |..||.++...+.+..-..
T Consensus 217 vlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~l------s~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 217 VLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETL------TLIQWLAIAAVIAASAGST 281 (292)
T ss_pred HHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHHhccc
Confidence 898 999999999999999999999999999999999999999999 5558999888877765333
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.97 E-value=2.3e-05 Score=60.84 Aligned_cols=71 Identities=14% Similarity=0.195 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEEeec-hhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934 259 SAFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 259 ~~~~~~~~~~~l~~~a~~~~~~~~~~~~-~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
..+++.++++.++..++|+.+.+.+-.+ .-+..+.+.+.++++++|++++.+++|..+|++|++......+
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 3455778899999999999999888666 4688899999999999999999999999999999988866543
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.85 E-value=0.00012 Score=56.03 Aligned_cols=69 Identities=14% Similarity=0.192 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEeec-hhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecc
Q 018934 260 AFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK 328 (348)
Q Consensus 260 ~~~~~~~~~~l~~~a~~~~~~~~~~~~-~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 328 (348)
.+++.++++.++..++++.+.+.+-.+ .-+..+.+.+.++++++|++++.+++|..+|++|+++....+
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 355778899999999999999888555 557888899999999999999999999999999999886544
No 70
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.78 E-value=0.00046 Score=63.22 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=95.4
Q ss_pred HHHHHHhhhhhhcCC-c--hHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 018934 200 VWYIIQQTQTMKLYP-A--EFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLR 276 (348)
Q Consensus 200 ~~~v~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~a~~ 276 (348)
.+.+.+ ++..++.. . +..++..++....+...+.......+. . ....+......++ ...++..+-+.+++
T Consensus 14 ~~g~~q-E~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~-~~~~~~~~~~~al~ 86 (303)
T PF08449_consen 14 SYGILQ-EKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--S---RKIPLKKYAILSF-LFFLASVLSNAALK 86 (303)
T ss_pred HHHHHH-HHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--C---CcChHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 344556 66665544 3 678888888887777666554443111 1 2223444445554 66678899999999
Q ss_pred cCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccccccc
Q 018934 277 MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAG 334 (348)
Q Consensus 277 ~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~~~ 334 (348)
+++...-.+.....|+...++++++++++.+..++.+..++.+|+.+....+.+++++
T Consensus 87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~ 144 (303)
T PF08449_consen 87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS 144 (303)
T ss_pred hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence 9999999999999999999999999999999999999999999999988765544443
No 71
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.62 E-value=0.00054 Score=52.28 Aligned_cols=65 Identities=14% Similarity=0.156 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHhhhcCCceEE-eechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 261 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 261 ~~~~~~~~~l~~~a~~~~~~~~~-~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
+.+.++++.+...++|+.+...+ ++..-+..+.+.+.++++++|++++.+++|.++|+.|+....
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 44667899999999999998887 455567888889999999999999999999999999988763
No 72
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.62 E-value=0.00019 Score=56.77 Aligned_cols=116 Identities=14% Similarity=0.193 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH-HH
Q 018934 12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG-SF 90 (348)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 90 (348)
+++.+++..++-+..-++.|..+ +..+..+.... . + .. ...... ....+..|+.. ..
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~-~~~g~~~~~~~-~------~-~~-~~~~~~------------p~~~i~lgl~~~~l 60 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGM-SRLPLLSHAWD-F------I-AA-LLAFGL------------ALRAVLLGLAGYAL 60 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-hhCCCccchhH-H------H-HH-HHHHhc------------cHHHHHHHHHHHHH
Confidence 56667777777777778888886 33333221111 0 0 01 000011 12246667777 99
Q ss_pred HHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHH--HhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 91 FRILGYTGIAYSSPTLASMIGNLTPGFTFILAII--FRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 91 ~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
+..++..+++..+++.+..+.+..+.++.+.++. ++||++ +..+++|+++.+.|++++.
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~l------s~~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETF------SLKKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999888888885 899999 5569999999999998876
No 73
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.57 E-value=0.0009 Score=53.64 Aligned_cols=132 Identities=14% Similarity=0.106 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHH
Q 018934 187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF 266 (348)
Q Consensus 187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 266 (348)
..++++.+++.-+...... .++.++.++|.....+.+..+.+.+.....+.++. ......+..|+. +.|-+.+..
T Consensus 2 ~~lla~~aG~~i~~q~~~N-~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~--~lGG~lG~~ 76 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFN-GQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWA--YLGGLLGVF 76 (138)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHH--hccHHHHHH
Confidence 3567888899999999999 99988887799999999999999888877776653 222112223333 334445666
Q ss_pred HHHHHHHhhhcCCceEEeec-hhhHHHHHHHHHHH----HhcCcchhhhhhhHHHHHHhhhh
Q 018934 267 ITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFI----FLSEALHLGSVIGGVITCVGFYT 323 (348)
Q Consensus 267 ~~~l~~~a~~~~~~~~~~~~-~~l~pv~a~~~~~~----~~~e~~~~~~~iG~~li~~g~~l 323 (348)
...+.....++.+++..... ..-+.+.+.++|.+ .-.+++++.+.+|.+++++|+++
T Consensus 77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 67777788899988877544 45567777888886 23578999999999999999864
No 74
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.56 E-value=0.00053 Score=52.00 Aligned_cols=66 Identities=12% Similarity=0.167 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhhhcCCceEE-eechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934 261 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW 326 (348)
Q Consensus 261 ~~~~~~~~~l~~~a~~~~~~~~~-~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 326 (348)
+++.++++.+...++|+.+...+ ++..-+..+.+.+.++++++|++++.+++|..+|++|++....
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 44678899999999999998887 4555588899999999999999999999999999999888754
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.54 E-value=0.00021 Score=53.66 Aligned_cols=65 Identities=18% Similarity=0.285 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhhhcCCceEE-eechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheec
Q 018934 263 GLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG 327 (348)
Q Consensus 263 ~~~~~~~l~~~a~~~~~~~~~-~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 327 (348)
+.+++|.+...++|+.+...+ ++..-...+.+.+.++++|+|+.++.+++|..++++|++.....
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 567889999999999988777 56677888889999999999999999999999999999887654
No 76
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.50 E-value=0.00042 Score=63.11 Aligned_cols=121 Identities=17% Similarity=0.223 Sum_probs=88.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCc-hHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHH
Q 018934 181 RSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPA-EFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYS 259 (348)
Q Consensus 181 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (348)
+.++.+|..+++.++++.+....++ |+..+|.+. +..-. ... .+. + .++.| +.
T Consensus 2 ~~~~~iGv~lav~ss~~~~~g~~lq-k~~~~r~~~~~~~~~--~~~------~~~----------l---~~~~W----~~ 55 (300)
T PF05653_consen 2 NTDFYIGVLLAVVSSIFIAVGFNLQ-KKSHLRLPRGSLRAG--SGG------RSY----------L---RRPLW----WI 55 (300)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccccccc--chh------hHH----------H---hhHHH----HH
Confidence 3567889999999999999999999 776655541 11000 000 000 0 11123 22
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheec
Q 018934 260 AFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG 327 (348)
Q Consensus 260 ~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 327 (348)
|....+++..+...++...+++.++++..+..++..+++..+++|+++..+++|+++++.|..+....
T Consensus 56 G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 56 GLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred HHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 23344556677778899999999999999999999999999999999999999999999997766543
No 77
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.49 E-value=6.1e-05 Score=65.34 Aligned_cols=139 Identities=14% Similarity=0.136 Sum_probs=95.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHH
Q 018934 182 SRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAF 261 (348)
Q Consensus 182 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 261 (348)
+...+|..+.-.+ .++....+.. ++..+.. |.+..-..++.-.+...|-.+..-.. .+-+.....|+ +.=|+
T Consensus 34 d~p~~gl~l~~vs-~ff~~~~vv~-t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~L--iLRg~ 105 (346)
T KOG4510|consen 34 DKPNLGLLLLTVS-YFFNSCMVVS-TKVLEND--PMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWL--ILRGF 105 (346)
T ss_pred CCCccCceehhhH-HHHhhHHHhh-hhhhccC--hhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEE--Eeehh
Confidence 3456677777777 7777777777 6666544 44444444444444444433222221 12211222332 22233
Q ss_pred HHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934 262 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 262 ~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
.+..+..+.+|++++.+-+.++++....|++++++++.+++|+.++...+|..+.+.|+++..+..-
T Consensus 106 -mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 106 -MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred -hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 3446778888999999999999999999999999999999999999999999999999999887543
No 78
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.37 E-value=0.031 Score=50.92 Aligned_cols=302 Identities=13% Similarity=0.048 Sum_probs=177.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCCCCchhHHHHHHHHHH
Q 018934 8 KNGALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSN-TASLPLFKFPVISRICFLSL 86 (348)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~ 86 (348)
.-..+++...+..++-+..++-.|+. ++-+=...-.....++.+++-.+.+.+.-++ .+.....+...+....+.|+
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 35678899999999999999999998 5555444444444455444333312221221 01112345567888889999
Q ss_pred HHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhc--ccccccccchhhhHHHHHhhhceeEEEeeCcccc
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMEN--LALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM 163 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~--~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~ 163 (348)
+-..+...|=.+++|...+...-+ ..+.-.+-.++-.++.++- + ..++.....+.|+++.++|+.+.. ..|..-+
T Consensus 82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l-~~~~~g~~vL~Gv~v~LiGIai~g-~AG~~Ke 159 (344)
T PF06379_consen 82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDEL-LATPSGQIVLLGVAVCLIGIAICG-KAGSMKE 159 (344)
T ss_pred HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccccc-ccCCCchhhhhHHHHHHHHHHHHh-HHHHhhh
Confidence 999999999999999999988544 5677777777766665431 1 223336678999999999998887 3332110
Q ss_pred CCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh--h----hcCC-chH----HHHHHHHHHHHHHHH
Q 018934 164 STASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQT--M----KLYP-AEF----VVTLLYCLFATIISA 232 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~--~----~~~~-~~~----~~~~~~~~~~~~~~~ 232 (348)
. +.+.+.++.+...|.++++.++++.|.++.-. ..- . .+.. +|. ......+..+.+.-.
T Consensus 160 ~---------~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~-~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~ 229 (344)
T PF06379_consen 160 K---------ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGL-DAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNL 229 (344)
T ss_pred h---------hhccchhhhhhhhhHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHH
Confidence 0 00112345677889999999999988887665 211 1 1111 122 233344455566666
Q ss_pred HHHHhccC---CccccccC--Cc----hhHHHHHHHHHHHHHHHHHHHHHhhhcCCce----EEeechhhHHHHHHHHHH
Q 018934 233 PICFVGES---NLSAWRLK--PD----IELASIVYSAFFGLSFITVVHTFGLRMKGPV----YTAIFKPLSIAIAAITSF 299 (348)
Q Consensus 233 ~~~~~~~~---~~~~~~~~--~~----~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~----~~~~~~~l~pv~a~~~~~ 299 (348)
..+++... +...+... .. .....-+..|++-. ..+.+|-.+-.+.+.. --.+.+.+..+++-+++.
T Consensus 230 ~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy-~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl 308 (344)
T PF06379_consen 230 IYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWY-SQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGL 308 (344)
T ss_pred HHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHH
Confidence 66665321 11111100 11 12222223333332 3444454555555543 224566677777888887
Q ss_pred HHhcC------cchhhhhhhHHHHHHhhhhhe
Q 018934 300 IFLSE------ALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 300 ~~~~e------~~~~~~~iG~~li~~g~~l~~ 325 (348)
+ ++| +.-..-++|+++++.++.++-
T Consensus 309 ~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 309 I-LKEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred H-HHHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 7 555 333445788888888876653
No 79
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.28 E-value=0.0034 Score=50.43 Aligned_cols=140 Identities=9% Similarity=0.079 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHH
Q 018934 185 VIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGL 264 (348)
Q Consensus 185 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 264 (348)
....+.++.++++-.+..... .++.+..++|.....+.+..+.+.+..+.++.+.+ ..+....+..|+.... |+ ..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN-~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~~G-G~-lG 79 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAIN-GRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAWIG-GL-LG 79 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHH-HHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHHHc-cc-hh
Confidence 346778888999999998888 89988888899999999999999888887775443 2222222223333322 22 22
Q ss_pred HHHHHHHHHhhhcCCceE-EeechhhHHHHHHHHHHHHhc----CcchhhhhhhHHHHHHhhhhheecc
Q 018934 265 SFITVVHTFGLRMKGPVY-TAIFKPLSIAIAAITSFIFLS----EALHLGSVIGGVITCVGFYTVLWGK 328 (348)
Q Consensus 265 ~~~~~l~~~a~~~~~~~~-~~~~~~l~pv~a~~~~~~~~~----e~~~~~~~iG~~li~~g~~l~~~~~ 328 (348)
.+-...-....++.+++. ......-+.+.+.+.|.+=+. .+++...++|.+++++|+++..+.+
T Consensus 80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 222222234455555544 456667778888888888775 6889999999999999976665543
No 80
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.23 E-value=0.0047 Score=47.13 Aligned_cols=68 Identities=12% Similarity=0.011 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcccChhhHH-hhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeE
Q 018934 81 ICFLSLVGSFFRILGYTGIAYSSPTLAS-MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV 154 (348)
Q Consensus 81 ~~~~g~~~~~~~~~~~~al~~~~~~~a~-~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 154 (348)
....-.+...+.+++..+++..|.+.+- +.....-+.+.+.+.+++||++ ++.++.|+.+.+.|++.+
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~------~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRL------NRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHHHh
Confidence 3344444478889999999999999994 4467999999999999999999 666999999999998764
No 81
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.23 E-value=0.0088 Score=47.94 Aligned_cols=129 Identities=17% Similarity=0.228 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 018934 14 TAMVAAECTIVGENIIFKLATSKGMS-YFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFR 92 (348)
Q Consensus 14 ~~~~~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 92 (348)
+..+.+-.+-+....++-.. .+..+ |...++.-+..+++++..+ ....++ +..+..+ +..++..+-|+++...-
T Consensus 4 lla~~aG~~i~~q~~~N~~L-~~~~gs~~~as~i~~~~G~i~~~i~-~~~~~~--~~~~~~~-~~p~w~~lGG~lG~~~V 78 (138)
T PF04657_consen 4 LLALLAGALIALQAAFNGQL-GKALGSPLVASFISFGVGFILLLII-LLITGR--PSLASLS-SVPWWAYLGGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHH-HHHhcc--cccchhc-cCChHHhccHHHHHHHH
Confidence 44555666666666666666 35555 9999999999999999888 666433 1212222 33455566999999999
Q ss_pred HHHHHhhcccChhhHHhhhhh-hHHHHHHHHHH--H--hhhcccccccccchhhhHHHHHhhhcee
Q 018934 93 ILGYTGIAYSSPTLASMIGNL-TPGFTFILAII--F--RMENLALSSLSTWAKIIGTLVSVSGAML 153 (348)
Q Consensus 93 ~~~~~al~~~~~~~a~~l~~~-~P~~~~i~a~l--~--~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 153 (348)
.+..+..+..+++.+..+.-+ +-+...++-++ + -|+++ +..+..|+++.+.|+.+
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~------~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPF------SLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCC------CHHHHHHHHHHHHHHhC
Confidence 999999999999999888665 44445555552 2 23444 77799999999999853
No 82
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.14 E-value=0.0015 Score=50.79 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 83 FLSLVGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 83 ~~g~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
+.-++.+.+.+++..++++.|.+.+-.+ ....-+.+.+++.++++|++ +..+++|+.+.+.|++.+-
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~------s~~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESL------SLMKIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHhh
Confidence 3333348899999999999999999666 57999999999999999999 6669999999999998876
No 83
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.11 E-value=0.0028 Score=48.51 Aligned_cols=110 Identities=15% Similarity=0.124 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 018934 17 VAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFFRILGY 96 (348)
Q Consensus 17 ~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 96 (348)
++..++||...++.|... ++.++..-.. |..-.... .+ + + +++.+-=.++-.+...|+
T Consensus 2 l~Vg~~WG~Tnpfik~g~-~~~~~~~~~~-~~~~~~~~--Ll-----~---------n----~~y~ipf~lNq~GSv~f~ 59 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGS-SGLEKVKASL-QLLQEIKF--LL-----L---------N----PKYIIPFLLNQSGSVLFF 59 (113)
T ss_pred eeehHHhcCchHHHHHHH-hhcCCccchH-HHHHHHHH--HH-----H---------h----HHHHHHHHHHHHHHHHHH
Confidence 456789999999999994 5555544331 21111111 01 1 1 222333334577888899
Q ss_pred HhhcccChhhHHhhh-hhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeE
Q 018934 97 TGIAYSSPTLASMIG-NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV 154 (348)
Q Consensus 97 ~al~~~~~~~a~~l~-~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 154 (348)
+.+...+.+.+..+. ++.=++|++.++++.+|.. ++..+.|+.+.+.|+.+.
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~------~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVI------SRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCccc------chhHHHHHHHHHcCeeee
Confidence 999999999998885 7899999999988777766 445899999999998765
No 84
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.09 E-value=0.0025 Score=47.35 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEee-chhhHHHHHHHHHHHHhcCcchhhhhhhHHHH
Q 018934 261 FFGLSFITVVHTFGLRMKGPVYTAI-FKPLSIAIAAITSFIFLSEALHLGSVIGGVIT 317 (348)
Q Consensus 261 ~~~~~~~~~l~~~a~~~~~~~~~~~-~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li 317 (348)
+.+.++++.++.+++|+.+.+.+-+ ..-+..+...+.+.+++||++++.+++|..+|
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 4477889999999999999999855 45589999999999999999999999999876
No 85
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.09 E-value=0.0016 Score=49.00 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHhhcccChhhH-HhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 84 LSLVGSFFRILGYTGIAYSSPTLA-SMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 84 ~g~~~~~~~~~~~~al~~~~~~~a-~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
.-++...++.++..++++.|.+.+ ++......+.+.+.+++++||++ +..+++++.+.+.|++.+-
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l------~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESL------SLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcC------CHHHHHHHHHHHHHHHHhh
Confidence 333348889999999999999999 55577999999999999999999 6669999999999987653
No 86
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.02 E-value=0.00067 Score=58.35 Aligned_cols=138 Identities=12% Similarity=0.053 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHHHHH
Q 018934 187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF 266 (348)
Q Consensus 187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 266 (348)
..++++.=+++|+..-... .+.. ++|.+-..-..+.+.++...+.++..+ .. ....+..-...|.+.+ +
T Consensus 3 ~~liaL~P~l~WGsip~v~-~k~G---G~p~qQ~lGtT~GALifaiiv~~~~~p-~~-----T~~~~iv~~isG~~Ws-~ 71 (288)
T COG4975 3 DLLIALLPALGWGSIPLVA-NKFG---GKPYQQTLGTTLGALIFAIIVFLFVSP-EL-----TLTIFIVGFISGAFWS-F 71 (288)
T ss_pred hHHHHHHHHHHhcccceee-eecC---CChhHhhhhccHHHHHHHHHHheeecC-cc-----chhhHHHHHHhhhHhh-h
Confidence 5678888899999886655 3332 235554444444444444444333221 11 2223444445556555 6
Q ss_pred HHHHHHHhhhcCCceEEeechh-hHHHHHHHHHHHHhcCcchhhhh----hhHHHHHHhhhhheeccccccccC
Q 018934 267 ITVVHTFGLRMKGPVYTAIFKP-LSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFYTVLWGKANDEAGK 335 (348)
Q Consensus 267 ~~~l~~~a~~~~~~~~~~~~~~-l~pv~a~~~~~~~~~e~~~~~~~----iG~~li~~g~~l~~~~~~~~~~~~ 335 (348)
++...+++++..+.+++.++.. .+.+-+.+++++++||..++.+. +.+++++.|+++..+.++.+++++
T Consensus 72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~ 145 (288)
T COG4975 72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEE 145 (288)
T ss_pred hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccccc
Confidence 8999999999999999988765 67777899999999999998865 457788889888877665444433
No 87
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.99 E-value=0.023 Score=52.50 Aligned_cols=146 Identities=11% Similarity=-0.037 Sum_probs=95.3
Q ss_pred CchhHHHHHHHHHHHHHHHH-------HHHHHHHhCCCCHHHHHHHHHH---HHHH-HHHHHHHHhh-ccCCCC----CC
Q 018934 8 KNGALFTAMVAAECTIVGEN-------IIFKLATSKGMSYFVFVFYSYA---ATTL-VLLLLFPFIF-RSNTAS----LP 71 (348)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~-------~~~k~~~~~~~~p~~~~~~r~~---~~~l-~l~~~~~~~~-~~~~~~----~~ 71 (348)
+..|+.+.++++.+..+..+ +..+.....+.++.....-.++ .+.. .-..+ +.+. +++++. .+
T Consensus 171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~-~~~~~~k~~~~~~~~~~ 249 (345)
T PRK13499 171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGF-CFIRLAKNKDLSLKADF 249 (345)
T ss_pred chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCCCcccchhc
Confidence 45789999999999999988 5555543456777766665555 3333 33334 3432 221121 01
Q ss_pred CCc----hhHHHHHHHHHHHHHHHHHHHHHhhcccChhhHHh---hh-hhhHHHHHHHHHHHhhhcccccccccchhhhH
Q 018934 72 LFK----FPVISRICFLSLVGSFFRILGYTGIAYSSPTLASM---IG-NLTPGFTFILAIIFRMENLALSSLSTWAKIIG 143 (348)
Q Consensus 72 ~~~----~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~---l~-~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g 143 (348)
..+ .++.....+.|++....+.++..+-...+.+.+.. +. ++.-++..+-+. ++||+-+...|..+..+.|
T Consensus 250 ~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G 328 (345)
T PRK13499 250 SLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG 328 (345)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence 112 23444457777777888899999988887666655 65 455566666666 6999887544557777999
Q ss_pred HHHHhhhceeEE
Q 018934 144 TLVSVSGAMLVV 155 (348)
Q Consensus 144 ~~l~~~Gv~li~ 155 (348)
+++.+.|++++.
T Consensus 329 ~vliI~g~~lig 340 (345)
T PRK13499 329 CVVIILAANIVG 340 (345)
T ss_pred HHHHHHHHHHHh
Confidence 999999988776
No 88
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.96 E-value=0.0037 Score=47.41 Aligned_cols=67 Identities=12% Similarity=-0.031 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 83 FLSLVGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 83 ~~g~~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
..-++...+.+++..+++..|.+.+-.+ ....-+.+.+.+.+++||++ ++.++.|+.+.+.|++.+-
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~------~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESA------SPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHhhh
Confidence 3333348899999999999999999544 67999999999999999999 6669999999999998764
No 89
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.89 E-value=0.0034 Score=48.11 Aligned_cols=61 Identities=20% Similarity=0.193 Sum_probs=55.0
Q ss_pred HHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 89 SFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 89 ~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
..+..++..+++..|.+.+-.+ ....-+.+.+++++++||++ ++.++.|+.+.+.|++.+-
T Consensus 41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~------~~~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL------DLPAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHHHHHHHHHHHHHHh
Confidence 7888889999999999999666 66899999999999999999 6679999999999998875
No 90
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.83 E-value=0.0032 Score=55.65 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccc
Q 018934 256 IVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND 331 (348)
Q Consensus 256 ~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 331 (348)
...-++ ...+...+.+.++++.+|+...++..++.++++++++++++++++..||++..+.++|+.+........
T Consensus 20 ~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 20 LAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 333333 566788889999999999999999999999999999999999999999999999999999987765554
No 91
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.73 E-value=0.029 Score=49.62 Aligned_cols=137 Identities=15% Similarity=0.062 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHHHHH
Q 018934 12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVGSFF 91 (348)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 91 (348)
|+++++.+.+++|.+++-.|.. +.-|++.+.++......+.-+++ ... +. . ++ -....++.|.+.+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~--~~gDg~~fQw~~~~~i~~~g~~v-~~~-~~--~--p~----f~p~amlgG~lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF--DTGDGFFFQWVMCSGIFLVGLVV-NLI-LG--F--PP----FYPWAMLGGALWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEec--cCCCcHHHHHHHHHHHHHHHHHH-HHh-cC--C--Cc----ceeHHHhhhhhhhcC
Confidence 4678899999999999999998 45688888888887777766655 554 22 1 22 245567777888999
Q ss_pred HHHHHHhhcccChhhHHhhhhhhHHHHHHH-HHH-HhhhcccccccccchhhhHHHHHhhhceeEEEeeCcc
Q 018934 92 RILGYTGIAYSSPTLASMIGNLTPGFTFIL-AII-FRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPT 161 (348)
Q Consensus 92 ~~~~~~al~~~~~~~a~~l~~~~P~~~~i~-a~l-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~ 161 (348)
+.+..-.++..+.+.+..+-++.-+.+--. +.+ +++++.+.. +..+...+|++++++|..+..+-+.+.
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCC
Confidence 999999999999999999877655544433 322 343332221 237788999999999999888655444
No 92
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.29 E-value=0.011 Score=53.99 Aligned_cols=140 Identities=13% Similarity=0.165 Sum_probs=109.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHHHHH-HHHHHhhccCCC---CCCCCchhHHHH
Q 018934 8 KNGALFTAMVAAECTIVGENIIFKLAT---SKGMSYFVFVFYSYAATTLVLL-LLFPFIFRSNTA---SLPLFKFPVISR 80 (348)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~---~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~~---~~~~~~~~~~~~ 80 (348)
-+..|....+.+.+..+...++.|..+ ....++.....+..-.+...++ |+ ......+.. .....+.. ...
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~-~~~~~~~~~~~~~~~~~~~~-~~~ 237 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPF-LDYVEGNKFVGFLTAPWFVT-FLI 237 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcch-Hhhhcccceeeeeccccchh-hHH
Confidence 467899999999999999999999998 3359999988888888888888 77 555311001 10122333 334
Q ss_pred HHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 81 ICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 81 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
..+..++....+...|..+..++|-.-++....-=.++...++++++|++ +..+..|.+++++|+.+-.
T Consensus 238 ~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pv------t~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 238 LLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPV------TFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCC------chhhHHHHHHHHHHHHHHH
Confidence 44444777888999999999999999999999888889999999999988 5669999999999987643
No 93
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.28 E-value=0.2 Score=45.92 Aligned_cols=143 Identities=13% Similarity=0.029 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcCC---chHHHHHHHHHHHHHHHHHHHHhccCC----c-cc---cccCCchhHHH
Q 018934 187 GGLLLLISNLLISVWYIIQQTQTMKLYP---AEFVVTLLYCLFATIISAPICFVGESN----L-SA---WRLKPDIELAS 255 (348)
Q Consensus 187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~---~~~~~~~~~~~ 255 (348)
=....+...+.++...... |...++.+ .|.+.....-++-.++.....+..++. . .. +....+.+...
T Consensus 16 k~~~l~~~t~~~~~l~l~l-~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 16 KYLSLIVLTAQNTALTLLL-RYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHhhHHHHH-HHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3344444444555555554 33333322 356666666666566555555544311 0 00 00001111122
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccccc
Q 018934 256 IVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND 331 (348)
Q Consensus 256 ~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 331 (348)
+..-+. ...+-..+++.+.++.+|+...+...+..+.++++.+++++++.+.+||....+...|+.+.......+
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~ 169 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP 169 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence 222222 444555688899999999999999999999999999999999999999999999999999988544443
No 94
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.10 E-value=0.025 Score=43.31 Aligned_cols=61 Identities=13% Similarity=0.093 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhhhcCCceEEeech-hhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhh
Q 018934 263 GLSFITVVHTFGLRMKGPVYTAIFK-PLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT 323 (348)
Q Consensus 263 ~~~~~~~l~~~a~~~~~~~~~~~~~-~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l 323 (348)
....+-..|++.+.+.+-+.+.++. .+.-+++++.++++.+|..++..++|+.+|++|+.+
T Consensus 50 lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 50 LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3345677888899999999999995 889999999999888888899999999999999765
No 95
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.09 E-value=0.023 Score=42.18 Aligned_cols=54 Identities=13% Similarity=0.016 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhcccChhhHHhh-hhhhHHHHHHHHHHHhhhcccccccccchhhhHHHH
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMI-GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLV 146 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l-~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l 146 (348)
+.+.+.+++..++++.|.+.+-.+ ..+..+.+.+.+..++||++ +..++.|+.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~------s~~~~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESL------SLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCC------CHHHHhheee
Confidence 338888999999999999999554 67999999999999999999 5558988875
No 96
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.91 E-value=0.24 Score=39.97 Aligned_cols=137 Identities=12% Similarity=0.031 Sum_probs=89.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTASLPLFKFPVISRICFLSLVGS 89 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~ 89 (348)
...+..+.+-.+-.....++-......-+|....+.-+..+.+.+..+ .... ++ .. ....++..++.++-|+++.
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l-~l~~~~~--~~-~a~~~~~pwW~~~GG~lGa 80 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLIL-LLIKQGH--PG-LAAVASAPWWAWIGGLLGA 80 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH-HHHhcCC--Cc-hhhccCCchHHHHccchhh
Confidence 344455555566666666665553233359999999999999998888 6654 32 22 2233555777888888888
Q ss_pred HHHHHHHHhhcccChhhHHhhhhh-hHHHHHHHHHH-HhhhcccccccccchhhhHHHHHhhhceeE
Q 018934 90 FFRILGYTGIAYSSPTLASMIGNL-TPGFTFILAII-FRMENLALSSLSTWAKIIGTLVSVSGAMLV 154 (348)
Q Consensus 90 ~~~~~~~~al~~~~~~~a~~l~~~-~P~~~~i~a~l-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 154 (348)
.+-+..........++....+.-. +-+...++-.+ +++++. .+.+..++.|+++.+.|+.++
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~---~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPK---RPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCc---CCCCHHHHHHHHHHHHHHHHh
Confidence 888888888888888877666544 33344333331 122222 245889999999999995443
No 97
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=95.86 E-value=0.1 Score=47.98 Aligned_cols=139 Identities=14% Similarity=0.103 Sum_probs=107.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHHHh-h--ccCCCCCCCCchhHHHHH
Q 018934 8 KNGALFTAMVAAECTIVGENIIFKLATSK---GMSYFVFVFYSYAATTLVLLLLFPFI-F--RSNTASLPLFKFPVISRI 81 (348)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~p~~~~~~r~~~~~l~l~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 81 (348)
+...|-++.++.+++++....+.|.-..+ .++-..+-.+--++..++++|. .+. . +. ++....+..+...+
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~-l~iL~~~~~--e~F~lP~~~q~~~v 320 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPP-LIILDFFGE--ERFELPSSTQFSLV 320 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHH-HHHHHHhcc--CcccCCCCceeEee
Confidence 45789999999999999999999988622 2555666666667777777766 433 2 33 44334445567788
Q ss_pred HHHHHHH-HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 82 CFLSLVG-SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 82 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
++.++++ +++.+++..|.-.+++-.+++-...+.-..++.-.++.+.++ +...++|.+..++|-+++.
T Consensus 321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~------S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHP------SALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHhhee
Confidence 8899999 999999999999999999998888666666677777766766 7789999999999988887
No 98
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.41 E-value=0.01 Score=53.36 Aligned_cols=129 Identities=18% Similarity=0.251 Sum_probs=93.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHH
Q 018934 181 RSRWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSA 260 (348)
Q Consensus 181 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 260 (348)
..++.+|..+++.+.++.+...++. |+..+|.. . .. .... ...... .....-+.|
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilk-Kkgl~r~~-~---~~---------------~ra~-~gg~~y----l~~~~Ww~G 70 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILK-KKGLKRAG-A---SG---------------LRAG-EGGYGY----LKEPLWWAG 70 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhh-HHHHHHHh-h---hc---------------cccc-CCCcch----hhhHHHHHH
Confidence 4567788899999988888887777 77665544 1 00 0000 000100 011122566
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccccccc
Q 018934 261 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAG 334 (348)
Q Consensus 261 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~~~ 334 (348)
++..+++-..-+.+....+++.++++..++.+..++++..+++|.++....+|+++.++|..+......++++.
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i 144 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI 144 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence 67778888888889999999999999999999999999999999999999999999999977776544444433
No 99
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.08 E-value=0.31 Score=42.32 Aligned_cols=67 Identities=10% Similarity=0.104 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhcee
Q 018934 81 ICFLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML 153 (348)
Q Consensus 81 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 153 (348)
.+...++......+....++|.++..-+....+.++++.+++.++++|++ +..++.|+.+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~l------s~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKI------SSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc------cHHHHHHHHHHHeeeEe
Confidence 33444445777788999999999999999999999999999999999999 66699999999998754
No 100
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.20 E-value=0.53 Score=41.67 Aligned_cols=127 Identities=9% Similarity=0.090 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHhccCC-ccccccCCchh-----HHHHHHHH
Q 018934 187 GGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN-LSAWRLKPDIE-----LASIVYSA 260 (348)
Q Consensus 187 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~l~~~ 260 (348)
|.+.++.|+++++...+=. |+.... |++....+++....+.......+.+.+ ...+....... ...+-.+-
T Consensus 1 G~~a~~va~~~fGs~~vPv-K~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~ 77 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPV-KKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIK 77 (254)
T ss_pred CchhHHHHHHHhcccceee-EeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhh
Confidence 4566788888888775555 444322 577776666665555555554444331 11111111000 01111111
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHH-HhcCcc-----hhhhhhhHHHHHHhhhhheeccccc
Q 018934 261 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFI-FLSEAL-----HLGSVIGGVITCVGFYTVLWGKAND 331 (348)
Q Consensus 261 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~-~~~e~~-----~~~~~iG~~li~~g~~l~~~~~~~~ 331 (348)
.++.++++.+|. ....+.+.+.+.+ +||+.+ +.+.++|.+++++|..+...-|.++
T Consensus 78 ~iGLglg~liW~---------------s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 78 TIGLGLGMLIWG---------------SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhhHHHHHHHH---------------HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 123355555554 2455666676654 455422 3668999999999988776544433
No 101
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.89 E-value=0.5 Score=42.71 Aligned_cols=141 Identities=20% Similarity=0.225 Sum_probs=105.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCCCCCchhHHHHHH
Q 018934 8 KNGALFTAMVAAECTIVGENIIFKLAT-SKGMSYFVFVFYSYAATTLVLLLLFPFIFRS----NTASLPLFKFPVISRIC 82 (348)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 82 (348)
-...|+.++....+.-+......|+.. ..+.+.+.+.++..+.+.+.+... .+...+ ......-.....+....
T Consensus 154 f~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~-~~~~ge~~~l~~~~~~~~~~~~~~~~~ 232 (314)
T KOG1444|consen 154 FNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLIL-SFITGELDALSLNFDNWSDSSVLVVML 232 (314)
T ss_pred ecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHH-HHHhcchHHHHhhcccccchhHHHHHH
Confidence 345688888888888888888888887 346888999999999998888777 544311 00000011233466777
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 83 FLSLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 83 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
+.++++..-.++.+.+.+..++...++.....-+.+.+...++.+++. ++...+|+.++++|.++-.
T Consensus 233 lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~------~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 233 LSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPF------TFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCcee------chhhhHHHHHHhhhhhHHh
Confidence 778888999999999999999998888886666777777777778877 6679999999999987654
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.28 E-value=0.18 Score=43.51 Aligned_cols=137 Identities=13% Similarity=0.032 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--CCCCchhHHHHHHHHHHHH
Q 018934 12 LFTAMVAAECTIVGENIIFKLA-TSKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTAS--LPLFKFPVISRICFLSLVG 88 (348)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~k~~-~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~ 88 (348)
|-+++++....=|.....-... .+..-+..++.++..+.+.+.+..- .+...+-++- .-.+.+..++.+.+.++++
T Consensus 173 GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g-~lfTGElweF~yF~~RhP~~~~~l~l~ai~s 251 (337)
T KOG1580|consen 173 GELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAG-LLFTGELWEFFYFVQRHPYVFWDLTLLAIAS 251 (337)
T ss_pred HHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhh-heehhhHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4444444444444443332211 1122344556666666776666544 3332110000 0123455688899999999
Q ss_pred HHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 89 SFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 89 ~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
++++.+.|.-+.+-+|-.-+++..+--+|+.+.+.+++...+ +.++|+|..+.+.|..+=.
T Consensus 252 ~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npl------s~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 252 CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPL------SGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcC------cHHHHHHHHHHHHHhhhHh
Confidence 999999999999999999999999999999999999999999 5559999999999876543
No 103
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.14 E-value=0.43 Score=40.87 Aligned_cols=136 Identities=14% Similarity=0.143 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccCCC-CCCCCchhHHHHHHHHHHH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLAT-SKGMSYFVFVFYSYAATTLVLLLLFPFIF-RSNTA-SLPLFKFPVISRICFLSLV 87 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~g~~ 87 (348)
.|+++|......-+..-...|+-. -.....++..++..+.+...++.+ .+.. .+..+ .....+.....+.++.|++
T Consensus 155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~-s~~~edws~~n~annl~~d~l~am~ISgl~ 233 (309)
T COG5070 155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSF-SFLFEDWSPGNLANNLSVDSLMAMFISGLC 233 (309)
T ss_pred CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHH-HHHhccCCcchhhcCCChHHHHHHHHHHHH
Confidence 355556555555555555556553 235677888999999999998887 7764 22000 0012344556788889999
Q ss_pred HHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhcee
Q 018934 88 GSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML 153 (348)
Q Consensus 88 ~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 153 (348)
.++-.+|.-++++-++.+.-+++..+.-.-.++.+.++++|+. +...+.++++++....+
T Consensus 234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~------nf~si~sillGflsg~i 293 (309)
T COG5070 234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPV------NFLSIFSILLGFLSGAI 293 (309)
T ss_pred HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCch------hHHHHHHHHHHHHHHHH
Confidence 9889999999999999999999999999999999999999988 66688888888765433
No 104
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=92.73 E-value=1.7 Score=39.17 Aligned_cols=139 Identities=12% Similarity=-0.021 Sum_probs=102.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--CCCCchhHHHHHHHH
Q 018934 8 KNGALFTAMVAAECTIVGENIIFKLAT-SKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTAS--LPLFKFPVISRICFL 84 (348)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 84 (348)
+...|+.++.....+=|..+..=...+ ...+++.++.+.-.+..++.-... ........+. .-+..++.++-+++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHH
Confidence 455677777777777777766666665 336999999999988888876655 4432221011 013466778889999
Q ss_pred HHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhcee
Q 018934 85 SLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML 153 (348)
Q Consensus 85 g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 153 (348)
..++..++.+.|+-++.-++-.-+++..+=-++...++.+.++.++ ++.+|.|+.+.+.|..+
T Consensus 248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~------s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPL------SSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCcc------chhhccCeeeehHHHHH
Confidence 9999888888888887776666677778888899999999999999 66689999888887654
No 105
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=89.83 E-value=1.8 Score=39.71 Aligned_cols=142 Identities=11% Similarity=0.104 Sum_probs=80.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHh--ccCCccc-cccCCchhHHHHHHH
Q 018934 183 RWVIGGLLLLISNLLISVWYIIQQTQTMKLYPAEFVVTLLYCLFATIISAPICFV--GESNLSA-WRLKPDIELASIVYS 259 (348)
Q Consensus 183 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~ 259 (348)
+-..|.++..+++++.+.+++=. |+. |+-+ .|.......+-+.+..|.... .-++... ....+...+......
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~-kkv-k~Ws--WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPF-KKV-KGWS--WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccch-hhc-CCcc--HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 45679999999999999987776 554 3333 333333333323333333222 2222211 122233344444555
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEE-eechhhHHHHHHHHHHHHhcC-------cchhhhhhhHHHHHHhhhhheeccc
Q 018934 260 AFFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSE-------ALHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 260 ~~~~~~~~~~l~~~a~~~~~~~~~-~~~~~l~pv~a~~~~~~~~~e-------~~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
|++-. ++-..|-.++|+++.+.. ++..-+..+++.++--++.|+ +-....++|.++.++|+.+.-+.-.
T Consensus 80 G~lWG-IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~ 156 (344)
T PF06379_consen 80 GVLWG-IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS 156 (344)
T ss_pred HHHHh-cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence 55443 677788888999887654 333444455555554454432 2234578999999999888765433
No 106
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=89.55 E-value=0.21 Score=41.78 Aligned_cols=62 Identities=10% Similarity=0.115 Sum_probs=57.1
Q ss_pred HHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheec
Q 018934 266 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG 327 (348)
Q Consensus 266 ~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 327 (348)
.+.++|..++++.+|+.++.+..-.-.+..+++++++++++..-.++...+.+.|+++..+.
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 46778889999999999999999999999999999999999999999999999998888753
No 107
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=86.21 E-value=0.62 Score=41.36 Aligned_cols=64 Identities=14% Similarity=0.159 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 262 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 262 ~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
+|-..+-.+.+.++....++...++.-...++..+++..+++.+++..+|+|+..+.+|.+.+-
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 3777888888899999999998899999999999999999999999999999999999977764
No 108
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=84.25 E-value=16 Score=33.26 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934 262 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 262 ~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
+++++-..+-++++++++.+.-++.....+++..+++.++-=|.+++....=..+|-+|+++..++..
T Consensus 92 lata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT 159 (349)
T KOG1443|consen 92 LATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST 159 (349)
T ss_pred hhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence 37778888999999999999999999999999999999999999999999888899999998887544
No 109
>PRK02237 hypothetical protein; Provisional
Probab=83.27 E-value=5.1 Score=30.23 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=37.7
Q ss_pred eechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecc
Q 018934 284 AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK 328 (348)
Q Consensus 284 ~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 328 (348)
+.+.-...+.+.++.+.+-|++|+...++|.++.++|..+..+..
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 455556677888999999999999999999999999987775543
No 110
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=79.74 E-value=8.7 Score=28.84 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=46.9
Q ss_pred HHHHHHHhhhcCCceEEeechh-hHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 267 ITVVHTFGLRMKGPVYTAIFKP-LSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 267 ~~~l~~~a~~~~~~~~~~~~~~-l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
+-.+|+.-+.+.+-+.+..+.+ +.-.++.+++.....|...-..++|..++++|+.+..
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 4556777788888888876654 5777888999987677777889999999999987753
No 111
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=79.41 E-value=48 Score=32.88 Aligned_cols=37 Identities=8% Similarity=-0.099 Sum_probs=15.7
Q ss_pred hhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhh
Q 018934 287 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT 323 (348)
Q Consensus 287 ~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l 323 (348)
.-..|+-+.++|.+.-.-.......++++..+.+..+
T Consensus 353 ~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 353 FGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 3344555555555543333333333333333333333
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.70 E-value=3.2 Score=31.24 Aligned_cols=45 Identities=16% Similarity=0.181 Sum_probs=36.9
Q ss_pred echhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934 285 IFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 285 ~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
.+.-...+.+.++++.+-+++|+...++|.++.++|..+..+..+
T Consensus 62 AYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 62 AYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 344455677889999999999999999999999999888776543
No 113
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=77.05 E-value=2.9 Score=31.33 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=27.4
Q ss_pred HHHHHHHHhcCcchhhhhhhHHHHHHhhhhhe
Q 018934 294 AAITSFIFLSEALHLGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 294 a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 325 (348)
-+.+++++++|++++....|..+++++++...
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 35677889999999999999999999977653
No 114
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.05 E-value=9.1 Score=28.26 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934 293 IAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW 326 (348)
Q Consensus 293 ~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 326 (348)
+-..++.+.++|++.+.++.|..++.+|++...+
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 3456788999999999999999999999887754
No 115
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=68.82 E-value=38 Score=30.33 Aligned_cols=138 Identities=15% Similarity=0.084 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC---CCchhHHHHHHHHHH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLAT-SKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLP---LFKFPVISRICFLSL 86 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~ 86 (348)
.|+..+-.+.+.=+...-+-...+ ...-+..+++++.+.+++.+++.. +....+-...+. +-+++.+...++.++
T Consensus 190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~-mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 190 IGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAP-MVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHH-HHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 444444444444444433333333 234566889999999999998887 665422001101 234556677777777
Q ss_pred HHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
.+.++......=++.-++..+..+...---.+.+++++++..++ +..-..+.++.+.|+.+=.
T Consensus 269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPf------T~qy~~~gllv~lgI~Ln~ 331 (367)
T KOG1582|consen 269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPF------TEQYVWSGLLVVLGIYLNM 331 (367)
T ss_pred HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCch------HHHHhhhhHHHHHHHHhhc
Confidence 77666655555556667777777777778889999999998888 5557888889999988876
No 116
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=68.20 E-value=14 Score=33.09 Aligned_cols=135 Identities=16% Similarity=0.125 Sum_probs=80.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCC-CCCC-chhHHHHHHHH
Q 018934 9 NGALFTAMVAAECTIVGENIIFKLATSK-GMSYFVFVFYSYAATTLVLLLLFPFIFRS-NTAS-LPLF-KFPVISRICFL 84 (348)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~-~~~~-~~~~~~~~~~~ 84 (348)
...|+++-+++++.-+.+.+..|..+.. +-.-+.++++..+.+.++++|. ..+..+ +.-+ .++. ..+-|-.+.+.
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpl-l~lnge~~~v~~~~~l~a~~Fw~~mtLs 261 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPL-LILNGEFQAVVGFPHLPAIKFWILMTLS 261 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHH-HHHcchHHHHcCcccchHHHHHHHHHHH
Confidence 4678999999999999999999988622 2345788899999999999998 666421 0011 0122 34445556666
Q ss_pred HHHHHHHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhh
Q 018934 85 SLVGSFFRILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSG 150 (348)
Q Consensus 85 g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~G 150 (348)
|++++.-.+.-..=++.++|-.--+=...-...=.++|..+++|.. +...|.+.++...|
T Consensus 262 glfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~k------s~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 262 GLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETK------SGLWWTSNIVVLVG 321 (347)
T ss_pred HHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHh------hhheeeeeEEEEeh
Confidence 6666444444444455555432211111223333467778889966 33455554433333
No 117
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=68.19 E-value=11 Score=28.22 Aligned_cols=113 Identities=20% Similarity=0.172 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHH
Q 018934 13 FTAMVAAECTIVGENIIFKLATSKGMSYF------VFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSL 86 (348)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~k~~~~~~~~p~------~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (348)
...++....+||...++.|.. +.+.+.. ...+.|-.-. ...+ +.+..-=.
T Consensus 5 ~~~lvaVgllWG~Tnplirrg-s~g~~~v~~~~~k~~~~lqe~~t-------------------l~l~----w~Y~iPFl 60 (125)
T KOG4831|consen 5 MDKLVAVGLLWGATNPLIRRG-SLGWDKVKSSSRKIMIALQEMKT-------------------LFLN----WEYLIPFL 60 (125)
T ss_pred HHHHHHHHHHHccccHHHHHH-HhhHhhccCchHHHHHHHHHHHH-------------------HHHh----HHHHHHHH
Confidence 345788899999999999988 3443221 1222221111 0111 22222233
Q ss_pred HHHHHHHHHHHhhcccChhhHHhhh-hhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 87 VGSFFRILGYTGIAYSSPTLASMIG-NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 87 ~~~~~~~~~~~al~~~~~~~a~~l~-~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
++-.+..+||.-++.++.+.+..+. ++.-.|+.+.+..+ +|++. .+..+.|..+.++|..+.+
T Consensus 61 lNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~-----g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 61 LNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQ-----GGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccc-----cceeehhhhHHhhhhhhee
Confidence 4445566788889999999988775 46888888888865 66553 4557899999999887654
No 118
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=66.42 E-value=30 Score=28.25 Aligned_cols=97 Identities=14% Similarity=0.161 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhhhcccccccccchhhhHHHH-------HhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHH
Q 018934 116 GFTFILAIIFRMENLALSSLSTWAKIIGTLV-------SVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGG 188 (348)
Q Consensus 116 ~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l-------~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 188 (348)
....+.....+-|-.-.++.|+..+..|+.+ ++.|+.++-. ....+.....
T Consensus 77 fIlVIAv~VQf~Em~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~----------------------~~~~~f~qsv 134 (193)
T COG4657 77 FILVIAVVVQFTEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNI----------------------NEGHNFLQSV 134 (193)
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHh----------------------hhhhhHHHHH
Confidence 3333444455555555555667778888765 5667766652 1233466677
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhc-----CCchHHHHHHHHHHHHHHHHHHH
Q 018934 189 LLLLISNLLISVWYIIQQTQTMKL-----YPAEFVVTLLYCLFATIISAPIC 235 (348)
Q Consensus 189 ~~~l~a~~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 235 (348)
..++.++++|++..++- ....+| .|.|..-..+.++.+.++.+.+.
T Consensus 135 ~~gf~a~lGfslvmvlf-A~iRER~~~advP~~frG~~ialitagLmSlaFm 185 (193)
T COG4657 135 VYGFGAALGFSLVMVLF-AAIRERLALADVPAPFRGAAIALITAGLMSLAFM 185 (193)
T ss_pred HHHhhhHhhHHHHHHHH-HHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHc
Confidence 88888888888887776 555544 33455555666666666655544
No 119
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=62.55 E-value=1.6e+02 Score=28.70 Aligned_cols=46 Identities=15% Similarity=0.006 Sum_probs=26.2
Q ss_pred echhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccc
Q 018934 285 IFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN 330 (348)
Q Consensus 285 ~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~ 330 (348)
.....-|+++.++..+..-.........|.+++..|..++.+.+++
T Consensus 393 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~~~~~ 438 (473)
T TIGR00905 393 RKALIVGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKE 438 (473)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445556666655554432222234567888888887666654443
No 120
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=56.86 E-value=1.2e+02 Score=25.76 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=20.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccChhhH
Q 018934 74 KFPVISRICFLSLVGSFFRILGYTGIAYSSPTLA 107 (348)
Q Consensus 74 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a 107 (348)
+++.++..++.++...+.+...+......++...
T Consensus 142 ~r~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~in 175 (206)
T PF06570_consen 142 KRPSWWKYILISVLAMVLWIVIFVLTSFLPPVIN 175 (206)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHccccCC
Confidence 3445666666666665566666666666665533
No 121
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=53.98 E-value=4.3 Score=25.03 Aligned_cols=18 Identities=17% Similarity=0.241 Sum_probs=10.3
Q ss_pred chhhhhhhHHHHHHhhhh
Q 018934 306 LHLGSVIGGVITCVGFYT 323 (348)
Q Consensus 306 ~~~~~~iG~~li~~g~~l 323 (348)
|+|+..+-.++|+.|++.
T Consensus 2 p~wlt~iFsvvIil~If~ 19 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIFA 19 (49)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 455566656666666543
No 122
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=53.80 E-value=40 Score=25.29 Aligned_cols=46 Identities=20% Similarity=0.200 Sum_probs=37.5
Q ss_pred eechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheeccc
Q 018934 284 AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 284 ~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
+...-...+.+.++.+++-|.+|+...++|..+-++|..+.....+
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 3455566778889999999999999999999999999777766543
No 123
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=52.28 E-value=27 Score=26.17 Aligned_cols=22 Identities=14% Similarity=0.363 Sum_probs=19.7
Q ss_pred cccchhhhHHHHHhhhceeEEE
Q 018934 135 LSTWAKIIGTLVSVSGAMLVVL 156 (348)
Q Consensus 135 ~~~~~~~~g~~l~~~Gv~li~~ 156 (348)
||+++++.|..+++.|+.++.+
T Consensus 83 ~pdr~D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 83 RPDRYDWIGAAICLAGVAVILF 104 (109)
T ss_pred CCcHHHhhhHHHHHhceeeeEe
Confidence 5699999999999999988884
No 124
>PRK02237 hypothetical protein; Provisional
Probab=48.24 E-value=87 Score=23.76 Aligned_cols=38 Identities=8% Similarity=0.096 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEE
Q 018934 113 LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL 156 (348)
Q Consensus 113 ~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 156 (348)
...+...+..+.+-|+|+ ++++++|..++++|+.++.+
T Consensus 68 vyI~~Sl~W~w~vdg~~P------d~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRP------DRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHHHhcCcCC------ChhHHHhHHHHHHhHHHhee
Confidence 444445555565555544 88999999999999988863
No 125
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=48.15 E-value=8 Score=34.98 Aligned_cols=66 Identities=5% Similarity=-0.019 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCceEEeechhh-HHHHHHHHHHHHhcCcch--hhhhhhHHHHHHhhhhhe
Q 018934 258 YSAFFGLSFITVVHTFGLRMKGPVYTAIFKPL-SIAIAAITSFIFLSEALH--LGSVIGGVITCVGFYTVL 325 (348)
Q Consensus 258 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l-~pv~a~~~~~~~~~e~~~--~~~~iG~~li~~g~~l~~ 325 (348)
..|+ .--++..+..+++...+-+.+-++..- .-+++..+.|+ +..+.+ .....|.+++++++++..
T Consensus 77 aGGv-vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 77 AGGV-VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HhhH-hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 3344 555788888888888887777655532 22334444444 344443 245678888888877654
No 126
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=46.89 E-value=74 Score=24.05 Aligned_cols=39 Identities=8% Similarity=0.126 Sum_probs=29.3
Q ss_pred hhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEEE
Q 018934 112 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL 156 (348)
Q Consensus 112 ~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 156 (348)
....+...+..+.+-|+|+ ++++++|..+++.|+.++.+
T Consensus 65 GvfI~~Sl~W~w~vdg~~P------d~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRP------DRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHHHHHHhhhcCcCC------ChHHHHhHHHHHHhHHheEe
Confidence 3455555666666655544 88899999999999999883
No 127
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=42.57 E-value=5.9 Score=34.94 Aligned_cols=134 Identities=19% Similarity=0.194 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhc-CCchHHHHHHHHHHHHHHHHHHHHhccCCccccccCCchhHHHHHHHHHHH
Q 018934 185 VIGGLLLLISNLLISVWYIIQQTQTMKL-YPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFG 263 (348)
Q Consensus 185 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 263 (348)
++|..++-.-.++-......+ ....++ .+.|..-++.....-+++-.|+..+..... ...|-....+++ .
T Consensus 17 li~~~LGQiLSL~~t~~a~ts-s~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~-------~~~~~hYilla~-~ 87 (336)
T KOG2766|consen 17 LIGLGLGQILSLLITSTAFTS-SELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYI-------KAKWRHYILLAF-V 87 (336)
T ss_pred hheeeHHHHHHHHHHcchhhh-HHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHH-------HHHHHHhhheeE-E
Confidence 344444433333434444444 555555 334555555554555566666655543211 112333334443 4
Q ss_pred HHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheec
Q 018934 264 LSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG 327 (348)
Q Consensus 264 ~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 327 (348)
.+=+.++..+|.++.+-+.+..+.--..+...+++|++++.+-.+.++.|.++-++|++++...
T Consensus 88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~s 151 (336)
T KOG2766|consen 88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFS 151 (336)
T ss_pred eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEe
Confidence 4455666667788888777777877778888999999999999999999999989998877643
No 128
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=41.53 E-value=1.3e+02 Score=25.62 Aligned_cols=23 Identities=4% Similarity=0.200 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh
Q 018934 186 IGGLLLLISNLLISVWYIIQQTQT 209 (348)
Q Consensus 186 ~G~~~~l~a~~~~a~~~v~~~~~~ 209 (348)
.+....++|++.++++..+. |+.
T Consensus 179 ~~~~~iiig~i~~~~~~~lk-kk~ 201 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLK-KKY 201 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHh
Confidence 36677788888888886666 443
No 129
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=40.56 E-value=2.3e+02 Score=24.07 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=22.2
Q ss_pred HHHHHHHhcCcchhhhhhhHHHHH--Hhhhhheeccc
Q 018934 295 AITSFIFLSEALHLGSVIGGVITC--VGFYTVLWGKA 329 (348)
Q Consensus 295 ~~~~~~~~~e~~~~~~~iG~~li~--~g~~l~~~~~~ 329 (348)
-.+|...+++-.-+....|..+.+ .|.....++++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~~~ 169 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARRER 169 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 455777788888888888866655 44444444333
No 130
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=38.35 E-value=7.9 Score=30.88 Aligned_cols=19 Identities=11% Similarity=0.113 Sum_probs=10.0
Q ss_pred EeechhhHHHHHHHHHHHH
Q 018934 283 TAIFKPLSIAIAAITSFIF 301 (348)
Q Consensus 283 ~~~~~~l~pv~a~~~~~~~ 301 (348)
.+.+.|+.|+++.+++.+.
T Consensus 77 sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 77 SALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444555666655555443
No 131
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=36.31 E-value=2.8e+02 Score=25.16 Aligned_cols=133 Identities=15% Similarity=0.203 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhhccCC----------CC--CCCCchhH
Q 018934 11 ALFTAMVAAECTIVGENIIFKLAT-SKGMSYFVFVFYSYAATTLVLLLLFPFIFRSNT----------AS--LPLFKFPV 77 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~----------~~--~~~~~~~~ 77 (348)
-|+..+.++.+.-+-+.+.-.... ..+=|+-+..++-...+..+++.. +++. ++ .+.....
T Consensus 164 iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~-----~~div~~~~~~~~se~~~~p~~g~~- 237 (330)
T KOG1583|consen 164 IGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM-----GDDIVSHWRLAFKSESYLIPLLGFK- 237 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh-----cchHHHHHHHHhcCcceeccccCcc-
Confidence 455556666666666655554444 237899999999999988777654 2210 10 0111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccC----hhhHHhhhhhhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhcee
Q 018934 78 ISRICFLSLVGSFFRILGYTGIAYSS----PTLASMIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAML 153 (348)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~al~~~~----~~~a~~l~~~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 153 (348)
....+..-+++++.++....|+...+ .-.+++...+==.+..+++.+.++..+ +++.|+|.++.+.|..+
T Consensus 238 vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npf------t~~h~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 238 VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPF------TPWHWLGAALVFFGTLL 311 (330)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCC------CHHHHHHHHHHHHHHHH
Confidence 22222233334566665555554333 334456666777888999999999988 77899999999999977
Q ss_pred EE
Q 018934 154 VV 155 (348)
Q Consensus 154 i~ 155 (348)
..
T Consensus 312 fa 313 (330)
T KOG1583|consen 312 FA 313 (330)
T ss_pred HH
Confidence 65
No 132
>PF15102 TMEM154: TMEM154 protein family
Probab=35.94 E-value=38 Score=27.20 Aligned_cols=18 Identities=11% Similarity=0.097 Sum_probs=8.6
Q ss_pred HHHHHhhhhheecccccc
Q 018934 315 VITCVGFYTVLWGKANDE 332 (348)
Q Consensus 315 ~li~~g~~l~~~~~~~~~ 332 (348)
++++..++++.+.|||+.
T Consensus 70 lLLl~vV~lv~~~kRkr~ 87 (146)
T PF15102_consen 70 LLLLSVVCLVIYYKRKRT 87 (146)
T ss_pred HHHHHHHHheeEEeeccc
Confidence 344444555555444443
No 133
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=35.75 E-value=3.7e+02 Score=25.08 Aligned_cols=30 Identities=10% Similarity=-0.167 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 018934 184 WVIGGLLLLISNLLISVWYIIQQTQTMKLYP 214 (348)
Q Consensus 184 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~ 214 (348)
...|......+........... .++.+|.+
T Consensus 245 ~~~g~~~~~~~~~~~i~g~~~~-g~l~~r~g 274 (402)
T PRK11902 245 GEVGIVNKTLGLAATIVGALAG-GTLMVRLG 274 (402)
T ss_pred HHHHHHHhHHHHHHHHHHHHHH-HHHHHHHh
Confidence 3445554443333344444455 55555554
No 134
>COG1971 Predicted membrane protein [Function unknown]
Probab=35.46 E-value=32 Score=28.99 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=27.6
Q ss_pred chhhHHHHHHHHHHHHhcCcchhhhhhhHH-HHHHhhhhhe
Q 018934 286 FKPLSIAIAAITSFIFLSEALHLGSVIGGV-ITCVGFYTVL 325 (348)
Q Consensus 286 ~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~-li~~g~~l~~ 325 (348)
+..+.|+++...+.++-+-.-.+..|+|.+ +++.|.....
T Consensus 46 f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~mI~ 86 (190)
T COG1971 46 FQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKMII 86 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445778888888888776666677877754 4557766654
No 135
>PRK11469 hypothetical protein; Provisional
Probab=35.08 E-value=20 Score=30.30 Aligned_cols=41 Identities=15% Similarity=0.056 Sum_probs=26.8
Q ss_pred echhhHHHHHHHHHHHHhcCcchhhhhhhHHH-HHHhhhhhe
Q 018934 285 IFKPLSIAIAAITSFIFLSEALHLGSVIGGVI-TCVGFYTVL 325 (348)
Q Consensus 285 ~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~l-i~~g~~l~~ 325 (348)
.++.+.|..+...+..+-+-.+....|+|..+ +..|.....
T Consensus 45 ~~q~~m~~~g~~~G~~l~~~i~~~~~~i~~~lL~~lG~~mi~ 86 (188)
T PRK11469 45 AVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMII 86 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467778888888776665555667877554 446766655
No 136
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=34.13 E-value=2.9e+02 Score=23.33 Aligned_cols=69 Identities=9% Similarity=0.014 Sum_probs=37.9
Q ss_pred HhhhcccccccccchhhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 018934 125 FRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYII 204 (348)
Q Consensus 125 ~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~ 204 (348)
+.+-+=.-.+||+.++.+.+....+-+.+.++ -.+..- ..+-+..+....+.+++++..|+-..+
T Consensus 148 ~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~v~-i~t~~l--------------PtslN~~L~pi~l~IiGav~lalRfyl 212 (226)
T COG4858 148 AYRMRADNSQRPGTWKYLLVAVLSMLLWIAVM-IATVFL--------------PTSLNPQLPPIALTIIGAVILALRFYL 212 (226)
T ss_pred HHHhhcccccCCchHHHHHHHHHHHHHHHHHH-HHHhhC--------------CCcCCcCCchHHHHHHHHHHHHHHHHH
Confidence 33433344667788887776665554444331 111000 111233445778888999889987666
Q ss_pred Hhhhh
Q 018934 205 QQTQT 209 (348)
Q Consensus 205 ~~~~~ 209 (348)
. |+.
T Consensus 213 k-kk~ 216 (226)
T COG4858 213 K-KKK 216 (226)
T ss_pred H-Hhh
Confidence 6 443
No 137
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=33.28 E-value=4.6e+02 Score=25.39 Aligned_cols=42 Identities=12% Similarity=0.106 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhheecccc
Q 018934 289 LSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN 330 (348)
Q Consensus 289 l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~ 330 (348)
..+.++.++..+..-..--....+|..+++.|+.++.+.+++
T Consensus 392 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~~~~~ 433 (468)
T TIGR03810 392 LIGLVALLYAVWLIYAAGLKYLLLSAILYAPGIYFYARARKE 433 (468)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444555544444332222345778888899998888664443
No 138
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=32.73 E-value=83 Score=20.53 Aligned_cols=44 Identities=16% Similarity=0.455 Sum_probs=30.7
Q ss_pred hhhHHHHHhhhceeEEEeeCccccCCCCCccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018934 140 KIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQQTQTMK 211 (348)
Q Consensus 140 ~~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 211 (348)
..+|..+.+.|++++. ..|+ |....+++....|...... ++..+
T Consensus 5 ~v~G~~lv~~Gii~~~-lPGp--------------------------G~l~i~~GL~iLa~ef~wA-rr~l~ 48 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLP-LPGP--------------------------GLLVIFLGLAILATEFPWA-RRLLR 48 (53)
T ss_pred hhHHHHHHHHHHHhhc-CCCC--------------------------cHHHHHHHHHHHHHhhHHH-HHHHH
Confidence 5788889999988877 3443 6677777777777766665 55443
No 139
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=31.97 E-value=14 Score=29.26 Aligned_cols=17 Identities=18% Similarity=0.161 Sum_probs=8.6
Q ss_pred echhhHHHHHHHHHHHH
Q 018934 285 IFKPLSIAIAAITSFIF 301 (348)
Q Consensus 285 ~~~~l~pv~a~~~~~~~ 301 (348)
.+.|+-|+++.+.+.++
T Consensus 72 ~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 72 FLVYLLPLLALIAGAVL 88 (135)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34445555555555543
No 140
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=30.61 E-value=3.3e+02 Score=22.97 Aligned_cols=111 Identities=9% Similarity=0.108 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh--ccCCCCCCCCchhHHHHHHHHHHHHH
Q 018934 12 LFTAMVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF--RSNTASLPLFKFPVISRICFLSLVGS 89 (348)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~ 89 (348)
+.+..-+.+.+-|.+..+.+.+ +..+-..+...-.+.++.+.... -+.. +. ++ . ++..++..++......
T Consensus 101 sLl~lg~~aLlsgitaff~~nA--~~~GlItlll~a~vgGfamy~my-~y~yr~~a--d~-s--qr~~~~K~~lv~~~sm 172 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNA--QVYGLITLLLTAVVGGFAMYIMY-YYAYRMRA--DN-S--QRPGTWKYLLVAVLSM 172 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCC--cchhHHHHHHHHHhhhHHHHHHH-HHHHHhhc--cc-c--cCCchHHHHHHHHHHH
Confidence 3444555566677777777765 56777777777777777666655 3332 33 22 1 1223455555555555
Q ss_pred HHHHHHHHhhcccChhhHHhhhhhhHHHHHHHHH------HHhhhccccc
Q 018934 90 FFRILGYTGIAYSSPTLASMIGNLTPGFTFILAI------IFRMENLALS 133 (348)
Q Consensus 90 ~~~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~------l~~~e~~~~~ 133 (348)
.-+.+.+.+-.+.|++.--. +.|+...+++. +.+|.|.+.+
T Consensus 173 ~lWi~v~i~t~~lPtslN~~---L~pi~l~IiGav~lalRfylkkk~NIq 219 (226)
T COG4858 173 LLWIAVMIATVFLPTSLNPQ---LPPIALTIIGAVILALRFYLKKKKNIQ 219 (226)
T ss_pred HHHHHHHHHHhhCCCcCCcC---CchHHHHHHHHHHHHHHHHHHHhhccc
Confidence 55555667777777664333 34444444433 4445555443
No 141
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=28.38 E-value=59 Score=24.51 Aligned_cols=69 Identities=14% Similarity=0.069 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----hhcccChhhHHhhhh-hhHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhc
Q 018934 78 ISRICFLSLVGSFFRILGYT-----GIAYSSPTLASMIGN-LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGA 151 (348)
Q Consensus 78 ~~~~~~~g~~~~~~~~~~~~-----al~~~~~~~a~~l~~-~~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv 151 (348)
++..++.+-..+..-+|+-. |.+.-++++--++.= ..-...+.++.+++||+++++ ...|-++.+.++
T Consensus 30 l~~ail~SWgIAffEY~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n------~l~af~~i~~av 103 (108)
T PF04342_consen 30 LWIAILISWGIAFFEYCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWN------YLWAFLCILGAV 103 (108)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHH------HHHHHHHHHHhh
Confidence 44445554444555554443 233334444444432 333344567788999999554 677666665554
Q ss_pred e
Q 018934 152 M 152 (348)
Q Consensus 152 ~ 152 (348)
.
T Consensus 104 ~ 104 (108)
T PF04342_consen 104 Y 104 (108)
T ss_pred h
Confidence 3
No 142
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=28.11 E-value=2e+02 Score=20.95 Aligned_cols=58 Identities=14% Similarity=0.112 Sum_probs=38.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW 326 (348)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 326 (348)
++..|..-+.++++..++.....+|-.... .....+-=.+...+|..++++|..+..+
T Consensus 28 ~sp~W~~p~m~~lmllGL~WiVvyYi~~~~--------------------i~pi~~lG~WN~~IGfg~~~~Gf~mt~r 85 (87)
T PF06781_consen 28 PSPRWYAPLMLGLMLLGLLWIVVYYISGGQ--------------------IPPIPDLGNWNLAIGFGLMIVGFLMTMR 85 (87)
T ss_pred CCCccHHHHHHHHHHHHHHHHhhhhcccCC--------------------CCCcccccchHHHHHHHHHHHHHHHHcc
Confidence 445788888888888888887777654443 0001222256778999999999777654
No 143
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=27.83 E-value=98 Score=28.27 Aligned_cols=113 Identities=19% Similarity=0.168 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhh---ccC-CCC------CCCCchhHHHHHHHHH
Q 018934 16 MVAAECTIVGENIIFKLATSKGMSYFVFVFYSYAATTLVLLLLFPFIF---RSN-TAS------LPLFKFPVISRICFLS 85 (348)
Q Consensus 16 ~~~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~~-~~~------~~~~~~~~~~~~~~~g 85 (348)
|+++.+|||......|++- ..--..+...+-+.++.++..+++.+.. .+. .+. ....+++.....+..|
T Consensus 1 M~itmlcwGSW~nt~kL~~-r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAE-RRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHH-hcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 4677899999999988884 3222223456666666666555522221 210 011 1234566677777777
Q ss_pred HHHHHHHHHHHHhhcccChhhHHhhhh-hhHHHHHHHHHHHhhhcc
Q 018934 86 LVGSFFRILGYTGIAYSSPTLASMIGN-LTPGFTFILAIIFRMENL 130 (348)
Q Consensus 86 ~~~~~~~~~~~~al~~~~~~~a~~l~~-~~P~~~~i~a~l~~~e~~ 130 (348)
++..+++.+.-+++.+.+.+.+-.+.. +.-+.-..+-+ ++..|.
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~ 124 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKI 124 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCC
Confidence 777899999999999998888766643 33333333333 344444
No 144
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=27.79 E-value=1.6e+02 Score=28.72 Aligned_cols=24 Identities=4% Similarity=0.093 Sum_probs=18.9
Q ss_pred chhhhhhhHHHHHHhhhhheeccc
Q 018934 306 LHLGSVIGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 306 ~~~~~~iG~~li~~g~~l~~~~~~ 329 (348)
++..|++...++++|+++..+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 678899999999999777665433
No 145
>PF09529 Intg_mem_TP0381: Integral membrane protein (intg_mem_TP0381); InterPro: IPR011737 This entry represents a family of hydrophobic proteins with seven predicted transmembrane alpha helices. Members are found in Bacillus subtilis (ywaF), TP0381 from Treponema pallidum (TP0381), Streptococcus pyogenes, Rhodococcus erythropolis, etc.
Probab=27.67 E-value=3.9e+02 Score=22.88 Aligned_cols=58 Identities=17% Similarity=0.049 Sum_probs=32.5
Q ss_pred HHHHHHHHHhhcccChhhHHhhhhh-hHHHHHHHHHHHhhhcccccccccchhhhHHHHHhhhceeEE
Q 018934 89 SFFRILGYTGIAYSSPTLASMIGNL-TPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV 155 (348)
Q Consensus 89 ~~~~~~~~~al~~~~~~~a~~l~~~-~P~~~~i~a~l~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 155 (348)
-.....++....+.+..+.-.+.-+ ...+...++.+..+|+. .-.....++.|.+...
T Consensus 52 ~i~~~~~~~~~~~~~~~e~LPLhlC~i~~~~~~l~l~~k~~~~---------~~~~~~~gi~Gai~Al 110 (225)
T PF09529_consen 52 EIILYIWYIYIGYFSLWESLPLHLCRIAMILAALALITKKKKL---------FEYFYFWGIIGAIQAL 110 (225)
T ss_pred HHHHHHHHHhcCCCchhccCCchhhhHHHHHHHHHHHcCcHHH---------HHHHHHHHHHHHHHHe
Confidence 5555566666677777776666554 34444455555555544 3334455665655444
No 146
>PF10101 DUF2339: Predicted membrane protein (DUF2339); InterPro: IPR019286 This entry, found in various hypothetical bacterial proteins, has no known function.
Probab=26.36 E-value=7.4e+02 Score=25.62 Aligned_cols=94 Identities=15% Similarity=0.077 Sum_probs=50.4
Q ss_pred HHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHH--HHHHHHHHHhhccc
Q 018934 26 ENIIFKLATSKG-MSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPLFKFPVISRICFLSLVG--SFFRILGYTGIAYS 102 (348)
Q Consensus 26 ~~~~~k~~~~~~-~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~al~~~ 102 (348)
...+.|.+.+++ ++|..=+..-...+..+...= .+. |+ ++.+.....+..|-+. ....+.-+.=++..
T Consensus 18 ~~fl~kya~~~g~l~p~~Rv~~g~~~g~~l~~~g-~~l-~~-------k~~~~~~~~L~g~G~a~ly~t~~aa~~~y~l~ 88 (745)
T PF10101_consen 18 VVFLLKYAIDAGWLGPAVRVALGAALGLALLAAG-ERL-RR-------KGYRAFAQALAGGGIAVLYLTVFAAYHLYGLI 88 (745)
T ss_pred HHHHHHHHHHcCcCCHHHHHHHHHHHHHHHHHHH-HHH-HH-------cccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345667776544 777765554444444333322 222 22 1223344444444333 33333334445667
Q ss_pred ChhhHHhhhhhhHHHHHHHHHHHhhh
Q 018934 103 SPTLASMIGNLTPGFTFILAIIFRME 128 (348)
Q Consensus 103 ~~~~a~~l~~~~P~~~~i~a~l~~~e 128 (348)
|+..+.++....-..+..+|....+|
T Consensus 89 ~~~~af~~~~~v~~~~~~la~r~~~~ 114 (745)
T PF10101_consen 89 PPPVAFALLALVTAAAVALALRYDSP 114 (745)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 88888888888888888887755444
No 147
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=25.62 E-value=39 Score=28.99 Aligned_cols=43 Identities=14% Similarity=0.273 Sum_probs=25.0
Q ss_pred EeechhhHHHHHHHHHHHHhcCcch-hhhhhh-HHHHHHhhhhhe
Q 018934 283 TAIFKPLSIAIAAITSFIFLSEALH-LGSVIG-GVITCVGFYTVL 325 (348)
Q Consensus 283 ~~~~~~l~pv~a~~~~~~~~~e~~~-~~~~iG-~~li~~g~~l~~ 325 (348)
.+.+....|..+..++..+-+-.+. ..+++| ..++..|.....
T Consensus 36 ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~mi~ 80 (206)
T TIGR02840 36 IAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWIIY 80 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 3444456667777777775544434 346666 455557866654
No 148
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=25.52 E-value=5e+02 Score=23.32 Aligned_cols=107 Identities=10% Similarity=-0.019 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC---CchhHHHHHHHHHHHHHHH
Q 018934 17 VAAECTIVGENIIFKLATSK--GMSYFVFVFYSYAATTLVLLLLFPFIFRSNTASLPL---FKFPVISRICFLSLVGSFF 91 (348)
Q Consensus 17 ~~~~~~~~~~~~~~k~~~~~--~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~ 91 (348)
+...++++..+.+.... ++ ++.|-....+-.+..+...... ...+|.||.-... .+-++|.. .+.+...-
T Consensus 100 l~ll~lyAlinAl~~l~-dGGR~v~~~~ai~yt~~s~~~Ca~~~-~~~~r~nrr~~s~lIald~kqW~M---st~lS~al 174 (314)
T COG3965 100 LALLCLYALINALGSLL-DGGREVEPGHAIAYTLVSVTGCAAIA-WKLRRLNRRLKSPLIALDTKQWLM---STCLSAAL 174 (314)
T ss_pred HHHHHHHHHHHHHHHHh-cCCccccccHHHHHHHHHHHHHHHHH-HHHHhhhccCCCchhhhHHHHHHH---HHHHHHHH
Confidence 44566778777777666 44 3777777777766665555544 3332322121111 23344443 33333222
Q ss_pred HHHHHHhhcccChhhHHhhhhhhHHHHHHHHHHHhhh
Q 018934 92 RILGYTGIAYSSPTLASMIGNLTPGFTFILAIIFRME 128 (348)
Q Consensus 92 ~~~~~~al~~~~~~~a~~l~~~~P~~~~i~a~l~~~e 128 (348)
...+..|.....-..+-+..+.-|+..++.+.++-+-
T Consensus 175 ~VaF~~a~~l~~T~~a~l~~Y~DPmvlaL~~~v~Ipl 211 (314)
T COG3965 175 FVAFAAAWLLAGTKFAHLVVYADPMVLALVCLVFIPL 211 (314)
T ss_pred HHHHHHHHHhccCchhhhhcccCHHHHHHHHHheeec
Confidence 2223333333334455566778898888888877443
No 149
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=23.53 E-value=1e+02 Score=17.46 Aligned_cols=18 Identities=17% Similarity=0.170 Sum_probs=9.1
Q ss_pred hhhhhhhHHHHHHhhhhh
Q 018934 307 HLGSVIGGVITCVGFYTV 324 (348)
Q Consensus 307 ~~~~~iG~~li~~g~~l~ 324 (348)
....++|.+++..+.++.
T Consensus 11 ~~~~~~G~~l~~~~~~~~ 28 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGLLL 28 (34)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 345566764444444433
No 150
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=23.18 E-value=24 Score=28.74 Aligned_cols=9 Identities=0% Similarity=0.098 Sum_probs=3.5
Q ss_pred hHHHHHHHH
Q 018934 289 LSIAIAAIT 297 (348)
Q Consensus 289 l~pv~a~~~ 297 (348)
+-|+++.+.
T Consensus 83 llPLl~li~ 91 (154)
T PRK10862 83 MTPLVGLFL 91 (154)
T ss_pred HHHHHHHHH
Confidence 334443333
No 151
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=22.61 E-value=74 Score=19.42 Aligned_cols=18 Identities=22% Similarity=0.689 Sum_probs=9.8
Q ss_pred hhHHHHHHhhhhheeccc
Q 018934 312 IGGVITCVGFYTVLWGKA 329 (348)
Q Consensus 312 iG~~li~~g~~l~~~~~~ 329 (348)
+|.++++.+.+++.|.++
T Consensus 21 V~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred hHHHHHHHHHHhheEEec
Confidence 344555666666655444
No 152
>PRK02251 putative septation inhibitor protein; Reviewed
Probab=21.12 E-value=3.4e+02 Score=19.78 Aligned_cols=57 Identities=14% Similarity=0.020 Sum_probs=37.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhcCCceEEeechhhHHHHHHHHHHHHhcCcchhhhhhhHHHHHHhhhhhee
Q 018934 249 PDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW 326 (348)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~l~pv~a~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 326 (348)
++..|..-+.+|++..++.+...+|.....= | ..+-=.+...+|..++++|..+..+
T Consensus 29 ~sP~W~~~~m~~lm~~Gl~WlvvyYl~~~~~-----------P----------~~~lG~WN~~IGfg~~~~G~~mt~r 85 (87)
T PRK02251 29 SNPRWFVPLFVALMIIGLIWLVVYYLSNGSL-----------P----------IPALGAWNLVIGFGLIMAGFGMTTQ 85 (87)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhCCCc-----------C----------cccccchhHHHHHHHHHHHHHHHcc
Confidence 4457888888888888888887777532100 1 0111135678999999999777653
No 153
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.12 E-value=35 Score=30.61 Aligned_cols=32 Identities=9% Similarity=0.146 Sum_probs=0.0
Q ss_pred hcccChhhHHhhhhhhHHHHHHHHH-HHhhhcc
Q 018934 99 IAYSSPTLASMIGNLTPGFTFILAI-IFRMENL 130 (348)
Q Consensus 99 l~~~~~~~a~~l~~~~P~~~~i~a~-l~~~e~~ 130 (348)
++-.+-+..+++++.+-+++.++-. .++|+|+
T Consensus 44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrL 76 (381)
T PF05297_consen 44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRL 76 (381)
T ss_dssp ---------------------------------
T ss_pred HhccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444444455666555555444433 3445544
Done!