Query 018935
Match_columns 348
No_of_seqs 129 out of 166
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 08:20:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018935.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018935hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1at0_A 17-hedgehog; developmen 95.6 0.029 9.9E-07 47.4 7.1 61 281-341 5-69 (145)
2 3qz6_A HPCH/HPAI aldolase; str 92.6 0.21 7.1E-06 45.9 6.6 91 109-203 15-110 (261)
3 3qja_A IGPS, indole-3-glycerol 91.5 0.93 3.2E-05 42.1 9.5 118 59-196 124-254 (272)
4 2in0_A Endonuclease PI-MTUI; h 91.4 0.28 9.7E-06 40.1 5.5 57 285-341 10-70 (139)
5 2v5j_A 2,4-dihydroxyhept-2-ENE 90.3 1.5 5.1E-05 40.9 9.8 93 107-203 36-133 (287)
6 3luf_A Two-component system re 89.3 1.3 4.6E-05 39.0 8.3 144 53-204 77-244 (259)
7 1mi8_A DNAB intein; all beta-s 89.2 0.85 2.9E-05 38.0 6.6 60 282-341 8-72 (158)
8 3q58_A N-acetylmannosamine-6-p 89.1 1.9 6.4E-05 38.9 9.2 107 60-190 91-211 (229)
9 1dxe_A 2-dehydro-3-deoxy-galac 89.1 2.1 7.1E-05 38.8 9.6 89 110-204 20-114 (256)
10 2v82_A 2-dehydro-3-deoxy-6-pho 88.6 0.91 3.1E-05 39.0 6.5 107 60-191 22-130 (212)
11 2vws_A YFAU, 2-keto-3-deoxy su 88.5 1.7 5.8E-05 39.8 8.6 92 108-203 16-112 (267)
12 1am2_A MXE GYRA intein; protei 88.3 0.88 3E-05 40.0 6.3 59 282-341 7-73 (199)
13 3qz6_A HPCH/HPAI aldolase; str 86.6 0.36 1.2E-05 44.4 3.0 143 51-194 17-179 (261)
14 1dxe_A 2-dehydro-3-deoxy-galac 86.1 4.1 0.00014 36.9 9.6 139 52-194 22-181 (256)
15 3bo9_A Putative nitroalkan dio 85.8 2.9 9.8E-05 39.1 8.7 113 57-190 37-152 (326)
16 3q58_A N-acetylmannosamine-6-p 85.5 9.7 0.00033 34.2 11.7 113 60-188 39-155 (229)
17 3qtg_A Pyruvate kinase, PK; TI 84.0 0.96 3.3E-05 45.7 4.8 135 58-205 182-344 (461)
18 3vnd_A TSA, tryptophan synthas 84.0 0.93 3.2E-05 42.1 4.4 114 60-191 113-237 (267)
19 3igs_A N-acetylmannosamine-6-p 83.8 4.2 0.00014 36.6 8.5 107 60-190 91-211 (232)
20 3igs_A N-acetylmannosamine-6-p 83.6 12 0.00041 33.6 11.4 112 60-188 39-155 (232)
21 3paj_A Nicotinate-nucleotide p 83.6 1.6 5.4E-05 42.2 5.9 41 160-203 232-272 (320)
22 1izc_A Macrophomate synthase i 82.8 2.5 8.6E-05 40.5 7.0 91 110-204 43-140 (339)
23 1qop_A Tryptophan synthase alp 82.1 1.4 4.7E-05 40.1 4.7 114 60-191 112-236 (268)
24 3hqn_D Pyruvate kinase, PK; TI 81.2 0.85 2.9E-05 46.5 3.2 134 58-204 193-352 (499)
25 1e0t_A Pyruvate kinase, PK; ph 81.2 1.6 5.5E-05 44.0 5.2 135 58-205 173-334 (470)
26 3gr4_A Pyruvate kinase isozyme 81.0 1.4 4.8E-05 45.4 4.8 134 58-204 243-402 (550)
27 1wa3_A 2-keto-3-deoxy-6-phosph 81.0 3.3 0.00011 35.2 6.4 121 60-203 25-145 (205)
28 3o63_A Probable thiamine-phosp 80.6 9.4 0.00032 34.7 9.7 89 108-203 135-239 (243)
29 2e28_A Pyruvate kinase, PK; al 80.5 1.4 4.7E-05 45.6 4.5 135 58-205 174-335 (587)
30 1umk_A B5R, NADH-cytochrome B5 80.4 3.9 0.00013 36.0 6.9 92 214-313 15-124 (275)
31 3nav_A Tryptophan synthase alp 80.0 1.8 6E-05 40.4 4.7 114 60-191 115-239 (271)
32 2ekc_A AQ_1548, tryptophan syn 79.9 1.5 5.2E-05 39.9 4.2 113 60-190 112-235 (262)
33 2v5j_A 2,4-dihydroxyhept-2-ENE 79.8 5.3 0.00018 37.2 7.9 36 159-194 166-202 (287)
34 2gjl_A Hypothetical protein PA 79.7 4.6 0.00016 37.3 7.4 111 58-190 27-146 (328)
35 2vws_A YFAU, 2-keto-3-deoxy su 79.7 6.9 0.00024 35.7 8.5 36 159-194 145-181 (267)
36 3tsm_A IGPS, indole-3-glycerol 79.6 12 0.00042 34.9 10.3 122 59-203 131-266 (272)
37 4drs_A Pyruvate kinase; glycol 79.3 2.8 9.4E-05 43.0 6.2 139 61-205 220-384 (526)
38 3hdg_A Uncharacterized protein 79.3 7.8 0.00027 29.2 7.4 82 116-200 36-119 (137)
39 3usb_A Inosine-5'-monophosphat 79.0 5.2 0.00018 40.0 8.1 115 56-191 254-390 (511)
40 1sgj_A Citrate lyase, beta sub 78.9 6.7 0.00023 35.9 8.1 91 110-204 9-116 (284)
41 4fxs_A Inosine-5'-monophosphat 78.7 4.6 0.00016 40.2 7.5 115 56-191 229-365 (496)
42 4e7p_A Response regulator; DNA 78.6 18 0.0006 27.9 9.5 81 116-199 51-133 (150)
43 3tqv_A Nicotinate-nucleotide p 78.4 3.3 0.00011 39.4 6.1 42 159-203 198-239 (287)
44 1a3w_A Pyruvate kinase; allost 78.3 0.51 1.7E-05 48.0 0.5 135 58-205 194-354 (500)
45 1at0_A 17-hedgehog; developmen 78.2 10 0.00036 31.6 8.5 36 290-325 85-121 (145)
46 2imz_A Endonuclease PI-MTUI; N 78.2 2.8 9.7E-05 35.0 5.0 59 283-341 7-70 (168)
47 4avf_A Inosine-5'-monophosphat 77.9 8.6 0.00029 38.2 9.2 115 56-191 227-363 (490)
48 3l0g_A Nicotinate-nucleotide p 77.8 3.2 0.00011 39.8 5.9 42 159-203 207-248 (300)
49 3jte_A Response regulator rece 77.7 13 0.00044 28.1 8.3 82 116-199 32-116 (143)
50 1o4u_A Type II quinolic acid p 76.0 4.7 0.00016 38.0 6.4 42 160-204 194-235 (285)
51 1xi3_A Thiamine phosphate pyro 75.8 9.3 0.00032 32.1 7.6 112 61-203 77-210 (215)
52 3ffs_A Inosine-5-monophosphate 75.5 7.9 0.00027 38.0 8.1 109 60-191 146-277 (400)
53 3gg8_A Pyruvate kinase; malari 75.5 1.5 5.1E-05 44.8 3.0 135 58-205 208-369 (511)
54 1wbh_A KHG/KDPG aldolase; lyas 75.4 10 0.00034 33.7 8.1 109 60-192 31-139 (214)
55 1ujp_A Tryptophan synthase alp 75.3 3.2 0.00011 38.3 5.0 114 60-191 109-231 (271)
56 3lab_A Putative KDPG (2-keto-3 74.8 15 0.0005 33.6 9.1 111 58-192 26-142 (217)
57 3khd_A Pyruvate kinase; malari 74.6 1.7 5.8E-05 44.6 3.2 135 58-205 217-378 (520)
58 3c2e_A Nicotinate-nucleotide p 74.3 2.2 7.5E-05 40.1 3.7 69 160-234 200-276 (294)
59 1qap_A Quinolinic acid phospho 74.2 4.3 0.00015 38.3 5.6 40 161-203 210-249 (296)
60 2qvg_A Two component response 74.1 15 0.00051 27.7 7.8 66 132-199 59-128 (143)
61 3grc_A Sensor protein, kinase; 74.1 25 0.00087 26.4 9.2 67 132-199 50-120 (140)
62 3gnn_A Nicotinate-nucleotide p 74.1 3.4 0.00011 39.5 4.9 42 159-203 209-250 (298)
63 1qo2_A Molecule: N-((5-phospho 74.0 13 0.00046 32.3 8.4 134 52-190 75-224 (241)
64 2b7n_A Probable nicotinate-nuc 73.4 8.1 0.00028 35.7 7.2 42 160-204 183-224 (273)
65 2gjl_A Hypothetical protein PA 73.3 15 0.0005 33.9 8.9 107 60-190 86-202 (328)
66 3t05_A Pyruvate kinase, PK; te 73.3 1.8 6.1E-05 45.1 3.0 135 58-205 194-354 (606)
67 1izc_A Macrophomate synthase i 73.1 2.7 9.2E-05 40.3 4.0 140 51-194 96-278 (339)
68 4e38_A Keto-hydroxyglutarate-a 73.0 9.6 0.00033 34.9 7.5 108 59-193 48-158 (232)
69 1w8s_A FBP aldolase, fructose- 72.8 11 0.00039 34.2 8.0 82 119-204 157-252 (263)
70 3o63_A Probable thiamine-phosp 72.1 9.1 0.00031 34.8 7.1 103 60-190 46-163 (243)
71 3q9s_A DNA-binding response re 72.1 13 0.00043 32.2 7.7 81 116-199 66-147 (249)
72 1k68_A Phytochrome response re 71.8 18 0.00063 26.7 7.6 66 132-199 55-124 (140)
73 3jqq_A Ferredoxin NADP reducta 71.4 5.6 0.00019 36.5 5.6 58 268-331 98-177 (316)
74 3f6c_A Positive transcription 71.1 13 0.00044 27.7 6.7 66 132-199 46-113 (134)
75 3kcn_A Adenylate cyclase homol 70.9 22 0.00075 27.4 8.2 82 116-199 32-116 (151)
76 4eh1_A Flavohemoprotein; struc 70.9 6.9 0.00024 33.5 5.7 101 215-331 3-121 (243)
77 4fo4_A Inosine 5'-monophosphat 70.8 13 0.00046 35.9 8.3 115 58-191 108-242 (366)
78 2qzj_A Two-component response 70.5 23 0.00078 27.0 8.1 66 132-199 48-114 (136)
79 3tha_A Tryptophan synthase alp 70.3 4.6 0.00016 37.5 4.8 116 59-191 105-229 (252)
80 2w6r_A Imidazole glycerol phos 70.2 22 0.00076 31.1 9.0 69 132-203 169-246 (266)
81 2tps_A Protein (thiamin phosph 69.9 18 0.00062 30.8 8.1 114 62-203 86-220 (227)
82 1vhc_A Putative KHG/KDPG aldol 69.7 13 0.00046 33.3 7.6 110 59-192 31-140 (224)
83 1sgj_A Citrate lyase, beta sub 69.7 8 0.00027 35.3 6.2 132 50-194 7-157 (284)
84 1p2f_A Response regulator; DRR 69.3 21 0.00072 29.4 8.2 79 116-199 30-110 (220)
85 1rd5_A Tryptophan synthase alp 69.3 3.7 0.00013 36.6 3.8 109 64-190 112-231 (262)
86 1xi3_A Thiamine phosphate pyro 68.8 23 0.0008 29.6 8.5 103 59-190 28-136 (215)
87 2v82_A 2-dehydro-3-deoxy-6-pho 68.7 9.9 0.00034 32.4 6.2 105 59-190 69-177 (212)
88 2jbm_A Nicotinate-nucleotide p 68.5 8.3 0.00028 36.3 6.2 42 160-204 198-239 (299)
89 3llv_A Exopolyphosphatase-rela 68.3 22 0.00074 27.8 7.7 116 50-191 6-125 (141)
90 3gt7_A Sensor protein; structu 68.2 25 0.00086 27.3 8.1 86 116-204 36-126 (154)
91 2gkg_A Response regulator homo 67.7 17 0.0006 26.3 6.6 66 132-199 49-118 (127)
92 1yxy_A Putative N-acetylmannos 66.9 25 0.00086 30.3 8.6 112 60-186 39-157 (234)
93 2z6i_A Trans-2-enoyl-ACP reduc 66.8 14 0.00048 34.3 7.3 107 60-190 78-192 (332)
94 3hdv_A Response regulator; PSI 66.5 21 0.0007 26.7 7.0 65 133-199 53-120 (136)
95 1kgs_A DRRD, DNA binding respo 66.3 23 0.00077 29.2 7.8 81 116-199 31-113 (225)
96 1tqj_A Ribulose-phosphate 3-ep 66.2 4.4 0.00015 36.1 3.6 124 60-201 75-219 (230)
97 3fwz_A Inner membrane protein 66.2 24 0.00083 28.0 7.7 104 60-191 20-127 (140)
98 1zgz_A Torcad operon transcrip 66.1 32 0.0011 25.0 7.9 65 132-198 46-111 (122)
99 3bw2_A 2-nitropropane dioxygen 65.9 16 0.00053 34.4 7.5 107 60-190 112-238 (369)
100 2y88_A Phosphoribosyl isomeras 65.6 20 0.00069 30.9 7.6 28 52-79 76-105 (244)
101 3h1g_A Chemotaxis protein CHEY 65.6 24 0.00083 26.3 7.3 40 159-199 81-120 (129)
102 3khj_A Inosine-5-monophosphate 65.5 14 0.00047 35.5 7.2 112 60-191 107-238 (361)
103 1geq_A Tryptophan synthase alp 65.4 6.2 0.00021 34.5 4.4 20 60-79 98-117 (248)
104 1yad_A Regulatory protein TENI 65.3 55 0.0019 28.0 10.4 51 132-190 88-138 (221)
105 3kto_A Response regulator rece 65.2 24 0.00082 26.6 7.2 40 159-199 80-119 (136)
106 1vzw_A Phosphoribosyl isomeras 65.0 19 0.00065 31.2 7.4 28 52-79 77-106 (244)
107 2zay_A Response regulator rece 64.8 38 0.0013 25.6 8.3 81 116-199 37-121 (147)
108 3ilh_A Two component response 64.7 41 0.0014 25.1 8.5 82 116-199 40-132 (146)
109 3lte_A Response regulator; str 64.7 34 0.0012 25.2 7.9 25 174-198 93-117 (132)
110 3eul_A Possible nitrate/nitrit 64.6 28 0.00097 26.7 7.6 66 132-199 61-128 (152)
111 3hv2_A Response regulator/HD d 64.6 41 0.0014 25.9 8.6 81 116-199 43-126 (153)
112 3eqz_A Response regulator; str 63.4 42 0.0014 24.7 9.8 81 116-199 32-118 (135)
113 3qvq_A Phosphodiesterase OLEI0 63.4 8.3 0.00029 34.3 4.9 32 48-79 208-240 (252)
114 2w6r_A Imidazole glycerol phos 63.1 14 0.00048 32.4 6.3 114 59-190 32-177 (266)
115 1k66_A Phytochrome response re 62.9 32 0.0011 25.7 7.5 66 132-199 62-131 (149)
116 4e2u_A PHO RADA intein; HINT-f 62.8 8 0.00027 32.9 4.5 60 282-341 10-94 (168)
117 1h1y_A D-ribulose-5-phosphate 62.8 10 0.00035 33.2 5.3 21 59-79 76-96 (228)
118 3t8y_A CHEB, chemotaxis respon 62.7 33 0.0011 27.1 7.9 74 117-192 57-132 (164)
119 3h5i_A Response regulator/sens 62.6 4.2 0.00014 31.1 2.5 83 116-199 34-117 (140)
120 3nhm_A Response regulator; pro 62.5 21 0.00071 26.5 6.3 80 116-199 32-115 (133)
121 1thf_D HISF protein; thermophI 62.1 22 0.00076 30.8 7.3 28 52-79 76-105 (253)
122 3kht_A Response regulator; PSI 62.1 41 0.0014 25.4 8.0 66 132-199 51-121 (144)
123 3rqi_A Response regulator prot 61.8 19 0.00066 29.1 6.5 39 159-198 79-117 (184)
124 3cnb_A DNA-binding response re 61.8 46 0.0016 24.7 8.2 66 132-199 54-123 (143)
125 1qpo_A Quinolinate acid phosph 61.7 10 0.00034 35.7 5.3 41 161-204 196-236 (284)
126 4fk8_A Ferredoxin--NADP reduct 61.5 13 0.00046 32.5 5.8 100 214-330 18-128 (271)
127 2z6i_A Trans-2-enoyl-ACP reduc 61.5 20 0.00068 33.3 7.2 110 59-190 25-138 (332)
128 2fli_A Ribulose-phosphate 3-ep 61.5 21 0.00071 30.3 6.9 18 61-78 75-92 (220)
129 1gpp_A Endonuclease PI-SCEI; h 61.3 6.2 0.00021 37.0 3.7 32 282-315 16-47 (237)
130 3qja_A IGPS, indole-3-glycerol 61.3 19 0.00066 33.2 7.1 70 118-192 123-192 (272)
131 3no3_A Glycerophosphodiester p 61.3 9.5 0.00033 33.8 4.8 32 48-79 194-226 (238)
132 2qr3_A Two-component system re 60.7 49 0.0017 24.6 8.3 40 159-199 80-119 (140)
133 2aam_A Hypothetical protein TM 60.6 17 0.0006 34.4 6.8 114 54-193 23-146 (309)
134 3cwo_X Beta/alpha-barrel prote 60.5 12 0.00041 30.9 5.0 21 58-78 63-83 (237)
135 3r0j_A Possible two component 60.4 35 0.0012 29.0 8.1 81 116-199 52-134 (250)
136 3ks6_A Glycerophosphoryl diest 60.4 10 0.00034 33.8 4.8 32 48-79 202-234 (250)
137 2yw3_A 4-hydroxy-2-oxoglutarat 60.1 41 0.0014 29.4 8.7 105 59-192 27-134 (207)
138 2tps_A Protein (thiamin phosph 59.5 28 0.00097 29.5 7.4 49 132-188 94-142 (227)
139 2jmz_A Hypothetical protein MJ 59.4 20 0.00068 30.8 6.4 69 278-347 100-180 (186)
140 2rjn_A Response regulator rece 59.4 57 0.002 25.0 9.8 81 116-199 36-119 (154)
141 1qkk_A DCTD, C4-dicarboxylate 59.2 51 0.0018 25.3 8.3 81 116-199 32-114 (155)
142 2jba_A Phosphate regulon trans 59.2 35 0.0012 24.9 7.0 66 132-199 46-115 (127)
143 3cfy_A Putative LUXO repressor 59.0 56 0.0019 24.7 8.8 66 132-199 48-115 (137)
144 3cg0_A Response regulator rece 58.6 19 0.00064 26.9 5.5 67 132-199 54-121 (140)
145 4dad_A Putative pilus assembly 58.4 23 0.00079 26.9 6.0 67 131-199 66-134 (146)
146 1mxs_A KDPG aldolase; 2-keto-3 58.4 26 0.00088 31.4 7.2 108 59-190 40-147 (225)
147 2qjg_A Putative aldolase MJ040 58.1 38 0.0013 29.9 8.2 101 63-188 105-236 (273)
148 3cu2_A Ribulose-5-phosphate 3- 57.9 26 0.00087 31.9 7.2 117 58-191 80-219 (237)
149 3mm4_A Histidine kinase homolo 56.4 29 0.001 28.9 6.8 71 132-204 119-195 (206)
150 3mz2_A Glycerophosphoryl diest 56.4 15 0.00051 33.9 5.5 49 149-199 218-274 (292)
151 2rc5_A Ferredoxin-NADP reducta 56.0 14 0.00047 33.3 5.1 41 288-331 131-172 (314)
152 1eep_A Inosine 5'-monophosphat 55.8 59 0.002 31.0 9.6 115 58-191 153-287 (404)
153 1vrd_A Inosine-5'-monophosphat 55.6 41 0.0014 32.8 8.6 112 58-191 237-371 (494)
154 1fnb_A Ferredoxin-NADP+ reduct 55.5 28 0.00097 31.3 7.0 102 216-331 38-169 (314)
155 3eod_A Protein HNR; response r 55.3 33 0.0011 25.3 6.3 40 159-199 79-119 (130)
156 2cnd_A NADH-dependent nitrate 55.0 49 0.0017 28.7 8.3 110 214-331 11-143 (270)
157 2qsj_A DNA-binding response re 54.9 27 0.00094 26.7 6.0 82 116-199 34-117 (154)
158 1xx1_A Smase I, sphingomyelina 54.9 13 0.00044 33.3 4.6 31 49-79 223-254 (285)
159 1dbw_A Transcriptional regulat 54.7 61 0.0021 23.8 7.9 80 117-199 33-114 (126)
160 1xhf_A DYE resistance, aerobic 54.7 33 0.0011 25.0 6.2 80 116-198 32-112 (123)
161 3ks6_A Glycerophosphoryl diest 54.5 9.9 0.00034 33.8 3.8 60 133-201 182-242 (250)
162 4g1v_A Flavohemoglobin; three 54.2 21 0.00073 33.4 6.2 103 214-331 148-279 (399)
163 2xz9_A Phosphoenolpyruvate-pro 54.0 32 0.0011 32.6 7.4 96 105-205 14-159 (324)
164 1vd6_A Glycerophosphoryl diest 53.8 16 0.00055 31.8 5.0 31 48-78 184-215 (224)
165 1y0e_A Putative N-acetylmannos 53.7 54 0.0018 27.9 8.2 114 60-189 26-146 (223)
166 2nv1_A Pyridoxal biosynthesis 53.5 1.3E+02 0.0045 27.4 11.7 110 53-189 24-152 (305)
167 1zfj_A Inosine monophosphate d 53.4 23 0.00079 34.3 6.4 119 58-191 233-367 (491)
168 3tsm_A IGPS, indole-3-glycerol 53.2 47 0.0016 30.9 8.3 70 118-192 130-199 (272)
169 1p6q_A CHEY2; chemotaxis, sign 53.1 48 0.0016 24.3 6.9 66 132-199 51-120 (129)
170 3bo9_A Putative nitroalkan dio 53.0 30 0.001 32.2 6.9 108 59-190 91-206 (326)
171 1krh_A Benzoate 1,2-dioxygenas 53.0 33 0.0011 31.2 7.1 97 215-331 108-217 (338)
172 1zh2_A KDP operon transcriptio 52.9 14 0.00049 26.8 3.8 65 132-198 45-110 (121)
173 3inp_A D-ribulose-phosphate 3- 52.8 15 0.00051 33.7 4.8 126 60-203 99-243 (246)
174 1x1o_A Nicotinate-nucleotide p 52.7 28 0.00095 32.7 6.7 41 160-203 197-237 (286)
175 2otd_A Glycerophosphodiester p 52.1 15 0.00051 32.3 4.5 32 48-79 205-237 (247)
176 3b2n_A Uncharacterized protein 51.1 74 0.0025 23.7 7.8 66 132-199 49-116 (133)
177 1i3c_A Response regulator RCP1 51.1 50 0.0017 25.3 6.9 66 132-199 61-130 (149)
178 1q7h_A Conserved hypothetical 50.9 11 0.00037 31.5 3.2 50 273-324 73-126 (153)
179 3snk_A Response regulator CHEY 50.7 29 0.00098 26.1 5.4 39 159-198 87-125 (135)
180 3l12_A Putative glycerophospho 50.7 15 0.0005 33.8 4.4 32 48-79 266-298 (313)
181 3f6p_A Transcriptional regulat 50.5 15 0.00053 27.2 3.8 65 132-198 46-111 (120)
182 2y88_A Phosphoribosyl isomeras 50.1 21 0.00071 30.8 5.1 104 92-201 5-118 (244)
183 1vd6_A Glycerophosphoryl diest 49.8 49 0.0017 28.6 7.4 59 144-203 77-142 (224)
184 2qxy_A Response regulator; reg 49.4 42 0.0014 25.2 6.1 80 116-199 33-114 (142)
185 1fdr_A Flavodoxin reductase; f 49.1 22 0.00076 30.5 5.0 50 278-331 61-113 (248)
186 3ffs_A Inosine-5-monophosphate 48.8 26 0.0009 34.4 6.0 55 132-189 156-212 (400)
187 1y0e_A Putative N-acetylmannos 48.5 48 0.0016 28.2 7.0 110 59-191 77-206 (223)
188 1zcc_A Glycerophosphodiester p 48.5 17 0.00057 32.2 4.3 32 48-79 192-225 (248)
189 1tmy_A CHEY protein, TMY; chem 48.5 59 0.002 23.5 6.7 65 132-198 47-113 (120)
190 1qo2_A Molecule: N-((5-phospho 48.4 67 0.0023 27.8 8.1 107 58-192 31-167 (241)
191 1a04_A Nitrate/nitrite respons 48.0 73 0.0025 26.0 7.9 66 132-199 51-118 (215)
192 3qvq_A Phosphodiesterase OLEI0 47.8 15 0.00052 32.6 3.9 50 143-198 195-245 (252)
193 1ep3_B Dihydroorotate dehydrog 47.5 35 0.0012 29.8 6.2 98 217-331 7-117 (262)
194 3lua_A Response regulator rece 47.1 40 0.0014 25.3 5.7 83 116-199 34-120 (140)
195 2pl1_A Transcriptional regulat 47.1 72 0.0024 23.0 6.9 81 116-199 29-111 (121)
196 3cz5_A Two-component response 47.0 51 0.0017 25.2 6.4 81 116-199 36-118 (153)
197 3no3_A Glycerophosphodiester p 47.0 15 0.00052 32.4 3.8 45 150-199 187-232 (238)
198 3crn_A Response regulator rece 46.3 61 0.0021 24.2 6.6 66 132-199 47-114 (132)
199 3heb_A Response regulator rece 45.9 55 0.0019 25.0 6.4 40 159-199 89-128 (152)
200 3hzh_A Chemotaxis response reg 45.1 40 0.0014 26.2 5.5 39 159-198 111-149 (157)
201 3rlg_A Sphingomyelin phosphodi 44.9 22 0.00074 34.3 4.6 30 50-79 241-271 (302)
202 1jcn_A Inosine monophosphate d 44.5 56 0.0019 32.1 7.7 113 58-191 255-389 (514)
203 2g1u_A Hypothetical protein TM 44.2 71 0.0024 25.5 7.1 107 60-192 32-139 (155)
204 2pz0_A Glycerophosphoryl diest 44.2 15 0.0005 32.6 3.2 32 48-79 209-241 (252)
205 2qdx_A Ferredoxin reductase; o 44.1 24 0.00082 30.6 4.5 49 278-331 61-113 (257)
206 2h6r_A Triosephosphate isomera 43.9 50 0.0017 29.0 6.6 113 63-196 75-211 (219)
207 3r2g_A Inosine 5'-monophosphat 43.2 95 0.0033 30.0 8.9 116 58-191 100-230 (361)
208 2lcj_A PAB POLC intein; hydrol 42.9 39 0.0013 28.9 5.6 43 299-341 45-90 (185)
209 3zv0_C H/ACA ribonucleoprotein 42.6 23 0.00077 32.1 4.2 53 273-327 78-134 (195)
210 1jbe_A Chemotaxis protein CHEY 42.4 97 0.0033 22.6 9.2 65 132-198 49-117 (128)
211 3f4w_A Putative hexulose 6 pho 42.2 85 0.0029 26.4 7.6 70 132-202 77-156 (211)
212 1vzw_A Phosphoribosyl isomeras 42.1 16 0.00055 31.7 3.0 102 92-199 6-117 (244)
213 3ceu_A Thiamine phosphate pyro 41.9 60 0.0021 27.9 6.7 97 60-190 16-115 (210)
214 1srr_A SPO0F, sporulation resp 41.6 77 0.0026 23.1 6.4 66 132-199 47-114 (124)
215 1dcf_A ETR1 protein; beta-alph 41.1 34 0.0011 25.6 4.4 38 161-199 85-122 (136)
216 3n53_A Response regulator rece 40.8 41 0.0014 25.3 4.9 66 132-199 46-115 (140)
217 3d79_A PUA domain, putative un 40.6 17 0.00057 31.5 2.9 53 272-326 96-153 (179)
218 3qll_A Citrate lyase; beta bar 40.6 58 0.002 30.6 6.9 131 51-194 45-194 (316)
219 2zbt_A Pyridoxal biosynthesis 40.6 2E+02 0.0069 25.8 13.9 113 52-189 23-152 (297)
220 1h1y_A D-ribulose-5-phosphate 40.6 1.1E+02 0.0038 26.5 8.3 113 58-190 20-146 (228)
221 3i42_A Response regulator rece 40.5 19 0.00064 26.6 2.8 67 132-201 47-117 (127)
222 1yio_A Response regulatory pro 40.1 43 0.0015 27.2 5.2 80 116-198 33-114 (208)
223 3ch0_A Glycerophosphodiester p 40.0 18 0.00063 32.0 3.2 32 48-79 234-266 (272)
224 2r25_B Osmosensing histidine p 39.9 32 0.0011 26.0 4.2 40 159-199 81-120 (133)
225 2oog_A Glycerophosphoryl diest 39.8 18 0.00063 32.6 3.2 31 48-78 239-270 (287)
226 1xx1_A Smase I, sphingomyelina 39.2 36 0.0012 30.3 5.0 46 149-199 212-260 (285)
227 2gwr_A DNA-binding response re 39.2 40 0.0014 28.3 5.0 66 132-199 49-115 (238)
228 1h5y_A HISF; histidine biosynt 39.1 27 0.00092 29.6 3.9 20 59-78 88-107 (253)
229 1id1_A Putative potassium chan 38.5 68 0.0023 25.5 6.1 104 60-187 16-123 (153)
230 1dz3_A Stage 0 sporulation pro 38.3 63 0.0022 23.8 5.5 65 132-198 48-115 (130)
231 2eix_A NADH-cytochrome B5 redu 38.1 28 0.00096 29.7 3.9 100 214-330 10-122 (243)
232 4ggc_A P55CDC, cell division c 37.7 1.2E+02 0.0042 24.9 7.7 10 266-275 7-16 (318)
233 3ovp_A Ribulose-phosphate 3-ep 37.4 45 0.0015 29.8 5.3 126 60-203 77-217 (228)
234 2oqr_A Sensory transduction pr 37.3 83 0.0028 25.9 6.6 66 132-199 48-114 (230)
235 3usb_A Inosine-5'-monophosphat 37.0 39 0.0013 33.7 5.3 145 131-296 267-432 (511)
236 2a9o_A Response regulator; ess 36.7 37 0.0013 24.4 3.9 39 159-198 72-110 (120)
237 1iq8_A Archaeosine tRNA-guanin 36.4 17 0.00058 37.3 2.6 50 273-324 510-563 (582)
238 3l12_A Putative glycerophospho 36.3 24 0.00083 32.3 3.4 52 142-199 252-304 (313)
239 1vhc_A Putative KHG/KDPG aldol 36.0 12 0.00042 33.5 1.4 33 166-201 76-108 (224)
240 3gl9_A Response regulator; bet 35.9 42 0.0014 24.9 4.2 65 132-198 46-114 (122)
241 2pln_A HP1043, response regula 35.5 43 0.0015 25.1 4.2 40 159-199 86-126 (137)
242 1u5h_A CITE; TIM barrel, struc 35.1 65 0.0022 29.4 6.1 83 112-199 10-102 (273)
243 3ctl_A D-allulose-6-phosphate 35.0 49 0.0017 29.7 5.2 128 60-204 70-218 (231)
244 3l4b_C TRKA K+ channel protien 34.4 58 0.002 27.5 5.3 105 60-191 13-121 (218)
245 3qqw_A Putative citrate lyase; 34.4 68 0.0023 30.3 6.3 31 50-80 22-57 (332)
246 3t6k_A Response regulator rece 33.9 46 0.0016 25.2 4.2 66 132-199 48-117 (136)
247 3bw2_A 2-nitropropane dioxygen 33.8 54 0.0019 30.7 5.5 51 132-189 122-172 (369)
248 1vc4_A Indole-3-glycerol phosp 33.7 66 0.0023 29.1 5.9 112 59-192 67-184 (254)
249 1s8n_A Putative antiterminator 33.5 1.5E+02 0.0053 23.9 7.6 38 161-199 87-124 (205)
250 1to3_A Putative aldolase YIHT; 33.1 1.2E+02 0.0041 28.2 7.7 14 62-75 113-126 (304)
251 3r2g_A Inosine 5'-monophosphat 33.1 35 0.0012 33.1 4.1 109 58-189 54-169 (361)
252 2qv0_A Protein MRKE; structura 33.0 1.5E+02 0.0051 22.0 8.8 64 132-199 55-120 (143)
253 3c85_A Putative glutathione-re 32.6 1.4E+02 0.0049 24.1 7.3 108 60-191 52-161 (183)
254 3eoo_A Methylisocitrate lyase; 32.6 2.1E+02 0.0071 27.0 9.2 72 132-203 111-206 (298)
255 3l9w_A Glutathione-regulated p 32.5 57 0.002 31.5 5.5 101 60-188 17-121 (413)
256 3p42_A Predicted protein; beta 32.4 40 0.0014 30.6 4.2 65 239-305 114-200 (236)
257 1mb3_A Cell division response 32.2 46 0.0016 24.2 3.8 66 132-199 45-114 (124)
258 1q5x_A Regulator of RNAse E ac 32.0 11 0.00038 32.4 0.4 27 292-319 50-76 (161)
259 1ka9_F Imidazole glycerol phos 31.5 42 0.0014 29.0 4.0 131 61-203 35-195 (252)
260 1mvo_A PHOP response regulator 31.0 80 0.0027 23.3 5.0 66 132-199 47-114 (136)
261 2o55_A Putative glycerophospho 30.9 57 0.002 28.7 4.8 32 48-79 210-246 (258)
262 4f3j_A Complement C1Q tumor ne 30.3 1.9E+02 0.0066 23.6 7.7 51 216-270 88-143 (148)
263 2j48_A Two-component sensor ki 30.2 52 0.0018 23.1 3.7 76 117-198 31-110 (119)
264 1dfa_A PI-SCEI endonuclease; i 30.0 11 0.00037 36.9 -0.0 34 280-315 4-37 (454)
265 1gvh_A Flavohemoprotein; oxido 29.9 74 0.0025 29.5 5.6 104 214-332 151-267 (396)
266 3qll_A Citrate lyase; beta bar 29.9 2.4E+02 0.0082 26.4 9.2 90 113-205 49-153 (316)
267 3vo2_A Putative uncharacterize 29.8 95 0.0032 27.9 6.2 40 288-331 126-165 (310)
268 1wbh_A KHG/KDPG aldolase; lyas 29.5 17 0.00059 32.2 1.2 78 116-197 23-103 (214)
269 3cg4_A Response regulator rece 29.2 45 0.0015 24.9 3.3 81 116-199 36-120 (142)
270 3a10_A Response regulator; pho 29.2 1.6E+02 0.0053 21.0 6.9 63 132-198 45-109 (116)
271 2fli_A Ribulose-phosphate 3-ep 28.4 2.1E+02 0.0072 24.0 7.8 109 58-188 17-137 (220)
272 1f20_A Nitric-oxide synthase; 27.3 27 0.00092 33.9 2.2 61 265-330 205-285 (435)
273 2yw3_A 4-hydroxy-2-oxoglutarat 27.2 33 0.0011 30.1 2.5 63 131-200 37-101 (207)
274 2r6h_A NADH:ubiquinone oxidore 27.1 12 0.00041 32.9 -0.2 39 287-331 124-163 (290)
275 1rpx_A Protein (ribulose-phosp 27.1 2.9E+02 0.01 23.5 8.6 111 58-190 24-148 (230)
276 2pcn_A S-adenosylmethionine:2- 27.0 18 0.00063 31.2 0.9 27 292-319 48-74 (161)
277 1zcc_A Glycerophosphodiester p 26.9 32 0.0011 30.4 2.4 62 133-201 171-233 (248)
278 3cwo_X Beta/alpha-barrel prote 26.3 1.5E+02 0.0051 24.2 6.3 70 132-203 25-99 (237)
279 3e61_A Putative transcriptiona 26.3 1.1E+02 0.0038 25.7 5.7 28 173-200 55-83 (277)
280 1qo0_D AMIR; binding protein, 26.2 67 0.0023 25.9 4.1 64 132-198 52-117 (196)
281 4e38_A Keto-hydroxyglutarate-a 26.0 73 0.0025 29.0 4.7 33 166-201 93-125 (232)
282 4dbe_A Orotidine 5'-phosphate 25.9 61 0.0021 29.0 4.1 32 172-203 125-156 (222)
283 4fxs_A Inosine-5'-monophosphat 25.7 83 0.0028 31.2 5.4 55 132-189 243-300 (496)
284 4a29_A Engineered retro-aldol 25.6 2.3E+02 0.0077 26.6 8.0 111 59-190 115-234 (258)
285 1gz0_A Hypothetical tRNA/RRNA 25.5 1.6E+02 0.0055 26.5 6.9 121 48-191 8-139 (253)
286 1jmx_B Amine dehydrogenase; ox 25.4 2.9E+02 0.01 23.0 9.2 71 235-312 2-76 (349)
287 1ys7_A Transcriptional regulat 25.4 47 0.0016 27.3 3.1 81 116-199 36-118 (233)
288 3m6m_D Sensory/regulatory prot 25.3 76 0.0026 24.2 4.1 39 160-199 91-129 (143)
289 2hqr_A Putative transcriptiona 25.2 56 0.0019 26.9 3.5 40 159-199 68-108 (223)
290 3m9b_A Proteasome-associated A 25.0 2.5E+02 0.0087 26.3 8.2 30 288-317 158-188 (251)
291 3cu5_A Two component transcrip 24.9 98 0.0033 23.5 4.6 65 132-198 49-115 (141)
292 1o1z_A GDPD, glycerophosphodie 24.7 85 0.0029 27.5 4.8 36 49-87 197-233 (234)
293 2bmw_A Ferredoxin--NADP reduct 24.3 19 0.00064 32.2 0.5 39 288-330 116-154 (304)
294 1nxj_A Probable S-adenosylmeth 24.3 23 0.00079 31.4 1.0 27 292-319 79-105 (183)
295 3khj_A Inosine-5-monophosphate 24.2 97 0.0033 29.6 5.4 54 132-188 117-172 (361)
296 4avf_A Inosine-5'-monophosphat 24.2 50 0.0017 32.7 3.5 65 121-188 229-297 (490)
297 1geq_A Tryptophan synthase alp 24.1 1.7E+02 0.006 25.1 6.6 93 111-204 7-130 (248)
298 2c6q_A GMP reductase 2; TIM ba 23.7 2.5E+02 0.0086 26.5 8.1 70 116-191 168-254 (351)
299 3lye_A Oxaloacetate acetyl hyd 23.4 2.8E+02 0.0096 26.3 8.4 72 132-203 116-213 (307)
300 4dql_A Bifunctional P-450/NADP 23.3 33 0.0011 32.9 2.0 38 288-330 207-246 (393)
301 2pia_A Phthalate dioxygenase r 23.2 22 0.00075 32.4 0.7 39 287-331 77-118 (321)
302 3sd4_A PHD finger protein 20; 23.0 1.1E+02 0.0038 22.5 4.4 35 296-331 12-46 (69)
303 3sjy_A Translation initiation 22.8 1.5E+02 0.0053 27.7 6.5 59 264-322 336-403 (403)
304 3nfg_A DNA-directed RNA polyme 22.8 21 0.00073 29.3 0.5 27 243-269 18-62 (102)
305 2eis_A Hypothetical protein TT 22.5 89 0.003 23.6 4.0 27 288-319 51-77 (133)
306 2ln7_A LPXTG-SITE transpeptida 22.5 74 0.0025 26.5 3.8 31 291-322 70-100 (147)
307 1a3w_A Pyruvate kinase; allost 22.2 1E+02 0.0035 31.3 5.4 37 169-205 193-230 (500)
308 2pz0_A Glycerophosphoryl diest 21.8 36 0.0012 30.1 1.8 57 133-198 189-246 (252)
309 4e2u_A PHO RADA intein; HINT-f 21.8 1.3E+02 0.0046 25.2 5.3 19 290-308 107-125 (168)
310 3r4i_A Citrate lyase; TIM beta 21.7 2.4E+02 0.0081 26.7 7.5 28 53-80 24-56 (339)
311 2cx0_A Hypothetical protein AP 21.7 1E+02 0.0035 26.9 4.6 53 272-326 94-151 (187)
312 3glc_A Aldolase LSRF; TIM barr 21.5 5E+02 0.017 24.2 10.1 66 132-203 202-277 (295)
313 3nk6_A 23S rRNA methyltransfer 21.3 2.5E+02 0.0085 25.8 7.4 118 50-190 32-152 (277)
314 3kyj_B CHEY6 protein, putative 21.1 30 0.001 26.3 1.0 37 160-196 88-125 (145)
315 2j5v_A Glutamate 5-kinase; pro 20.9 25 0.00085 33.8 0.6 48 273-322 278-330 (367)
316 1vi4_A Regulator of ribonuclea 20.8 30 0.001 30.4 1.0 27 292-319 53-79 (174)
317 3cux_A Malate synthase; TIM ba 20.7 2.6E+02 0.0089 28.6 8.0 153 49-215 84-270 (528)
318 1mxs_A KDPG aldolase; 2-keto-3 20.7 27 0.00091 31.3 0.7 29 165-196 84-112 (225)
319 2aef_A Calcium-gated potassium 20.6 1.4E+02 0.0048 25.3 5.2 62 118-188 59-124 (234)
320 3tdn_A FLR symmetric alpha-bet 20.3 57 0.0019 28.5 2.7 35 166-203 88-125 (247)
321 3mz2_A Glycerophosphoryl diest 20.2 1E+02 0.0035 28.3 4.6 32 48-79 226-268 (292)
322 3lo8_A Ferredoxin--NADP reduct 20.2 30 0.001 31.0 0.9 105 215-331 28-167 (311)
323 1ypf_A GMP reductase; GUAC, pu 20.2 78 0.0027 29.5 3.8 67 119-188 104-176 (336)
324 2egj_A Hypothetical protein AQ 20.1 1.8E+02 0.0062 21.3 5.2 29 288-321 58-86 (128)
325 2e28_A Pyruvate kinase, PK; al 20.1 1E+02 0.0036 31.8 5.0 38 168-205 172-210 (587)
No 1
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=95.61 E-value=0.029 Score=47.40 Aligned_cols=61 Identities=16% Similarity=0.228 Sum_probs=43.6
Q ss_pred eeEEEecCCceeeeeeccCCCeEEEEcCCCCeeEE----eeeeEEeeccceeEEEEEECCEeeee
Q 018935 281 HAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTA----VVGRVKIESRPLILVEAKVIKLFTAS 341 (348)
Q Consensus 281 HaYv~~pggkT~YLSEL~aG~eVLvVd~~G~tR~~----~VGRvKIE~RPLlLIeAe~~G~~~~~ 341 (348)
-+-|.+++|.++-++||+.||+||+.|.+|+.... ...|-.-..++++-|+.+.+-.+..+
T Consensus 5 ~t~V~~~~G~~k~i~eL~~GD~Vla~d~~G~~~~s~V~~~~~r~~~~~~~f~~I~t~~g~~L~lT 69 (145)
T 1at0_A 5 ESTALLESGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHTDGGAVLTVT 69 (145)
T ss_dssp TCEEEBTTSCEEEGGGCCTTCEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEEEEETTSCEEEEC
T ss_pred CCEEEeCCCCEeEHHHcCCCCEEEEECCCCCEEEEEEEEEEeeCCCcceeEEEEEECCCCEEEEe
Confidence 35689999999999999999999999999985332 22333333467787877644455443
No 2
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=92.63 E-value=0.21 Score=45.94 Aligned_cols=91 Identities=13% Similarity=0.212 Sum_probs=67.5
Q ss_pred CeeEEEEEe-cChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc---CCCceEEEEcCCHHHHHHHHHHhhcccC
Q 018935 109 RRVGSIIEV-STPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ---GSGKTVFAISKTPSEAQIFLEALEQGLG 184 (348)
Q Consensus 109 k~v~~~~~v-~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q---~~~~~l~a~v~~~~eA~~al~~LE~G~D 184 (348)
..++.++.+ .+++-.+.++.. ..|+++++..| .+.|.+.+.+.++ ..+..++..++..+. .....+|+.|+|
T Consensus 15 ~~~g~~~~~~~~p~~~e~a~~~--g~D~vilDlEh-av~~~~k~~~~l~a~~~~~~~~~VRVn~~~~-~di~~~ld~G~~ 90 (261)
T 3qz6_A 15 SVVGTMLNLVYNPDIVRIYAEA--GLDYFIVDCEH-AAYTFREINHLVSVAKNAGVSVLVRIPQVDR-AHVQRLLDIGAE 90 (261)
T ss_dssp CEEEEEESSCCCTTHHHHHHHT--TCSEEEEESSS-SCCCHHHHHHHHHHHHHHTCEEEEECSSCCH-HHHHHHHHHTCC
T ss_pred CEEEEEEecCCCHHHHHHHhcC--CcCEEEEeccC-CCCCHHHHHHHHHHHhhcCCeEEEEeCCCCH-HHHHHHHhcCCC
Confidence 556788888 788876666542 68999998876 5667665554433 235678889887655 456678899999
Q ss_pred eEEEe-cCCHHHHHHHHHhh
Q 018935 185 GIVLK-VEDVKAVLALKEYF 203 (348)
Q Consensus 185 GVvl~-~~d~~~v~~l~~~~ 203 (348)
||++. .+++++++++.+.+
T Consensus 91 gI~lP~v~saed~~~~~~~~ 110 (261)
T 3qz6_A 91 GFMIPGVQSAETMRETVRLA 110 (261)
T ss_dssp EEEETTCCSHHHHHHHHHHH
T ss_pred EEEECCcCCHHHHHHHHHHh
Confidence 99997 57899999888876
No 3
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=91.45 E-value=0.93 Score=42.07 Aligned_cols=118 Identities=14% Similarity=0.136 Sum_probs=69.5
Q ss_pred chhHHHHHHHhCCcEEEEcCcc--hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 018935 59 SKQVMTAAVERGWNTFVFLSEN--QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~--~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v 136 (348)
+...+..|.+.|+|+|++...+ .+..+++-.... .-|.. .++++.+.++++.+.. . .++++
T Consensus 124 d~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~-------------~lGl~--~lvev~t~ee~~~A~~-~-Gad~I 186 (272)
T 3qja_A 124 QPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTE-------------SLGMT--ALVEVHTEQEADRALK-A-GAKVI 186 (272)
T ss_dssp SHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHH-------------HTTCE--EEEEESSHHHHHHHHH-H-TCSEE
T ss_pred CHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHH-------------HCCCc--EEEEcCCHHHHHHHHH-C-CCCEE
Confidence 4556889999999999873211 111221111100 11322 4678899998877553 3 68999
Q ss_pred EEeCCCCee--eehhhhhhcccCC--CceEEEE--cCCHHHHHHHHHHhhcccCeEEEec-----CCHHHH
Q 018935 137 VIDLPDWQV--IPAENIVASFQGS--GKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV-----EDVKAV 196 (348)
Q Consensus 137 vv~~~DW~i--IPlENliA~~q~~--~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~-----~d~~~v 196 (348)
.++.+|-+- +.++.+..-.+.. +..++++ +++.++++. +++.|+|||++-. +||.+.
T Consensus 187 Gv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~---l~~~GadgvlVGsal~~a~dp~~~ 254 (272)
T 3qja_A 187 GVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLA---YAGAGADAVLVGEGLVTSGDPRAA 254 (272)
T ss_dssp EEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHH---HHHTTCSEEEECHHHHTCSCHHHH
T ss_pred EECCCcccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHH---HHHcCCCEEEEcHHHhCCCCHHHH
Confidence 998765322 3445443222222 3456665 467888764 4678999999854 677653
No 4
>2in0_A Endonuclease PI-MTUI; hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 2l8l_A 2in9_A 2in8_A 3ifj_A 3igd_A
Probab=91.44 E-value=0.28 Score=40.12 Aligned_cols=57 Identities=14% Similarity=0.106 Sum_probs=43.5
Q ss_pred EecCCceeeeeec---cCCCeEEEEcCCCCeeEEeee-eEEeeccceeEEEEEECCEeeee
Q 018935 285 LVPGGKTCYLSEL---KSGKEVIVVDQKGRQRTAVVG-RVKIESRPLILVEAKVIKLFTAS 341 (348)
Q Consensus 285 ~~pggkT~YLSEL---~aG~eVLvVd~~G~tR~~~VG-RvKIE~RPLlLIeAe~~G~~~~~ 341 (348)
.+++|+.+-+.|| +.||+|+..|.+|+.....|= -.+-..+|++-|+.+.+-.|.+.
T Consensus 10 ~~~~G~~~~I~~l~~~~~gd~V~s~d~~g~~~~~~v~~~~~~~~~~~~~i~t~~G~~i~~T 70 (139)
T 2in0_A 10 DPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFDQGTRDVIGLRIAGGAILWAT 70 (139)
T ss_dssp CTTTCCEEEHHHHHHTTCCCEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEETTSCEEEEC
T ss_pred ECCCCCEEEHHHhhCccCCCEEEEECCCCCEEEEEEEEEEEcCCcEEEEEEeCCCCEEEec
Confidence 4589999999999 999999999999997544433 33456889998887555555543
No 5
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=90.28 E-value=1.5 Score=40.89 Aligned_cols=93 Identities=9% Similarity=0.083 Sum_probs=65.7
Q ss_pred CCC-eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeehhhh---hhcccCCCceEEEEcCCHHHHHHHHHHhhcc
Q 018935 107 GDR-RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENI---VASFQGSGKTVFAISKTPSEAQIFLEALEQG 182 (348)
Q Consensus 107 ~gk-~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENl---iA~~q~~~~~l~a~v~~~~eA~~al~~LE~G 182 (348)
+|+ .++.++.+.+++..+.++. ...|+++++..|-. .-.|++ +.+++..+..++..++..+.. ....+|+.|
T Consensus 36 ~G~~~~gl~~~~~~p~~~e~a~~--~GaD~v~lDlEh~~-~~~~~~~~~l~a~~~~~~~~~VRv~~~d~~-di~~~ld~g 111 (287)
T 2v5j_A 36 AGRPQIGLWLGLSSSYSAELLAG--AGFDWLLIDGEHAP-NNVQTVLTQLQAIAPYPSQPVVRPSWNDPV-QIKQLLDVG 111 (287)
T ss_dssp TTCCEEEEEECSCCHHHHHHHHT--SCCSEEEEESSSSS-CCHHHHHHHHHHHTTSSSEEEEECSSSCHH-HHHHHHHTT
T ss_pred CCCcEEEEEEECCCHHHHHHHHh--CCCCEEEEeCCCcc-chHHHHHHHHHHHHhcCCCEEEEECCCCHH-HHHHHHhCC
Confidence 466 7889999999999877654 25899999888762 223333 333344455688888765543 456678899
Q ss_pred cCeEEEec-CCHHHHHHHHHhh
Q 018935 183 LGGIVLKV-EDVKAVLALKEYF 203 (348)
Q Consensus 183 ~DGVvl~~-~d~~~v~~l~~~~ 203 (348)
+|||++.- ++++|++++.+.+
T Consensus 112 a~~ImlP~V~saeea~~~~~~~ 133 (287)
T 2v5j_A 112 TQTLLVPMVQNADEAREAVRAT 133 (287)
T ss_dssp CCEEEESCCCSHHHHHHHHHHT
T ss_pred CCEEEeCCCCCHHHHHHHHHHh
Confidence 99999964 5688888877655
No 6
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=89.34 E-value=1.3 Score=39.00 Aligned_cols=144 Identities=15% Similarity=0.193 Sum_probs=77.4
Q ss_pred EEEEe--CchhHHHHHHHhCCcEEEEcCcchhhhhhccce------eeeeeeeecCCc--------cccCCCCeeEEEEE
Q 018935 53 VWIWT--ESKQVMTAAVERGWNTFVFLSENQQLAIDWSTI------ALLDPLFIKEGE--------VYDSGDRRVGSIIE 116 (348)
Q Consensus 53 vWiw~--~~K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i------~~i~~l~~~~g~--------~~~~~gk~v~~~~~ 116 (348)
+.+-+ .+.+....|++.|++.++..+...........+ ..++.++++|.. .+...|..+. .
T Consensus 77 vi~lt~~~~~~~~~~a~~~Ga~dyl~Kp~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~~~~~l~~~L~~~~~~v~---~ 153 (259)
T 3luf_A 77 VVILTADISEDKREAWLEAGVLDYVMKDSRHSLQYAVGLVHRLYLNQQIEVLVVDDSRTSRHRTMAQLRKQLLQVH---E 153 (259)
T ss_dssp EEEEECC-CHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHTTTCEEE---E
T ss_pred EEEEEccCCHHHHHHHHHCCCcEEEeCCchhHHHHHHHhhhhHhhcCCCcEEEEeCCHHHHHHHHHHHHHcCcEEE---E
Confidence 55555 467788889999999999876432221111111 123446667663 2345565432 4
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhh---hhhccc----CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 018935 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAEN---IVASFQ----GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (348)
Q Consensus 117 v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlEN---liA~~q----~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (348)
..+.++.-.........|-+++ |+. .|-.| ++..+. .....|+....+. +......+++.|++|.+.+
T Consensus 154 a~~~~eal~~l~~~~~~dlvll---D~~-mP~~dG~~l~~~lr~~~~~~~~~ii~~s~~~-~~~~~~~a~~~Ga~~yl~K 228 (259)
T 3luf_A 154 ASHAREALATLEQHPAIRLVLV---DYY-MPEIDGISLVRMLRERYSKQQLAIIGISVSD-KRGLSARYLKQGANDFLNQ 228 (259)
T ss_dssp ESSHHHHHHHHHHCTTEEEEEE---CSC-CSSSCHHHHHHHHHHHCCTTTSEEEEEECSS-SSSHHHHHHHTTCSEEEES
T ss_pred eCCHHHHHHHHhcCCCCCEEEE---cCC-CCCCCHHHHHHHHHhccCCCCCeEEEEEccC-CHHHHHHHHhcChhheEcC
Confidence 4665543222221112355666 443 23211 222221 2234565444333 3344567899999999999
Q ss_pred cCCHHHHHH-HHHhhc
Q 018935 190 VEDVKAVLA-LKEYFD 204 (348)
Q Consensus 190 ~~d~~~v~~-l~~~~~ 204 (348)
|-+++++.. ++..++
T Consensus 229 P~~~~~L~~~i~~~l~ 244 (259)
T 3luf_A 229 PFEPEELQCRVSHNLE 244 (259)
T ss_dssp SCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 999988754 344443
No 7
>1mi8_A DNAB intein; all beta-strands, hydrolase; 2.00A {Synechocystis SP} SCOP: b.86.1.2
Probab=89.20 E-value=0.85 Score=38.03 Aligned_cols=60 Identities=15% Similarity=0.293 Sum_probs=46.9
Q ss_pred eEEEecC-Cceeeeeecc--CCCeEEEEcC-CCCeeEEeeeeE-EeeccceeEEEEEECCEeeee
Q 018935 282 AYVLVPG-GKTCYLSELK--SGKEVIVVDQ-KGRQRTAVVGRV-KIESRPLILVEAKVIKLFTAS 341 (348)
Q Consensus 282 aYv~~pg-gkT~YLSEL~--aG~eVLvVd~-~G~tR~~~VGRv-KIE~RPLlLIeAe~~G~~~~~ 341 (348)
+-|.+++ |+.+-+.||. .|++|+.+|. +|+.....|-++ +...+|++-|+.+.+-.|.+.
T Consensus 8 t~V~~~~~G~~~~I~el~~~~g~~V~s~d~~~g~~~~~~v~~~~~~~~~~~~~i~t~~G~~i~~T 72 (158)
T 1mi8_A 8 SLISLASTGKRVSIKDLLDEKDFEIWAINEQTMKLESAKVSRVFMTGKKLVYILKTRLGRTIKAT 72 (158)
T ss_dssp CEEEETTTTEEEESGGGTTCCSCEEEEEETTTTEEEEEECCEEEEEEEEEEEEEEETTCCEEEEC
T ss_pred cEEEecCCCeEEEHHHhhhccCCEEEEEeCCCCEEEEEEeeeeeecCCceEEEEEECCCCEEEEe
Confidence 4678899 9999999999 8999999996 788777666444 456789999888755555544
No 8
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=89.07 E-value=1.9 Score=38.86 Aligned_cols=107 Identities=21% Similarity=0.181 Sum_probs=62.2
Q ss_pred hhHHHHHHHhCCcEEEEcCc------c-hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 018935 60 KQVMTAAVERGWNTFVFLSE------N-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~------~-~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~ 132 (348)
.+.+..+++.|+|.+++... . .+..+...+. |.. ..+.+.+.++.+.+.. ..
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~-----------------g~~--v~~~v~t~eea~~a~~--~G 149 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH-----------------GLL--AMADCSTVNEGISCHQ--KG 149 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-----------------TCE--EEEECSSHHHHHHHHH--TT
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC-----------------CCE--EEEecCCHHHHHHHHh--CC
Confidence 44578899999998876431 1 2333333222 322 4457788877655432 36
Q ss_pred CCeEEEeCCCCe-----eeehhhhhhcccCCCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 018935 133 AENIVIDLPDWQ-----VIPAENIVASFQGSGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 133 ~~~vvv~~~DW~-----iIPlENliA~~q~~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
++++.+...+-+ --|--+++.++...+..+++. ++++++++.++ +.|+|||++-+
T Consensus 150 ad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI~t~~d~~~~~---~~GadgV~VGs 211 (229)
T 3q58_A 150 IEFIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVIAEGRYNTPALAANAI---EHGAWAVTVGS 211 (229)
T ss_dssp CSEEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEEEESSCCSHHHHHHHH---HTTCSEEEECH
T ss_pred CCEEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHH---HcCCCEEEEch
Confidence 788765322211 122224444443335567776 56788887665 56999999864
No 9
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=89.07 E-value=2.1 Score=38.80 Aligned_cols=89 Identities=17% Similarity=0.176 Sum_probs=64.3
Q ss_pred eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeehh-----hhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccC
Q 018935 110 RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAE-----NIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLG 184 (348)
Q Consensus 110 ~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlE-----NliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~D 184 (348)
.++.+..+.+++..+.+... ..|+++++..|- |.| ..+.+++..+..++..++..+..- ...+|+.|+|
T Consensus 20 ~~~~~l~v~~p~~~e~a~~~--gaD~v~lDlEd~---p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~~-i~~~l~~g~~ 93 (256)
T 1dxe_A 20 QIGCWSALSNPISTEVLGLA--GFDWLVLDGEHA---PNDISTFIPQLMALKGSASAPVVRVPTNEPVI-IKRLLDIGFY 93 (256)
T ss_dssp EEEEEECSCSHHHHHHHTTS--CCSEEEEESSSS---SCCHHHHHHHHHHTTTCSSEEEEECSSSCHHH-HHHHHHTTCC
T ss_pred eEEEEEeCCCHHHHHHHHhC--CCCEEEEcCCCC---CCCHHHHHHHHHHHHhCCCcEEEECCCCCHHH-HHHHHhcCCc
Confidence 46778888888887766542 689999998886 653 444445544556888887655443 6678899999
Q ss_pred eEEEe-cCCHHHHHHHHHhhc
Q 018935 185 GIVLK-VEDVKAVLALKEYFD 204 (348)
Q Consensus 185 GVvl~-~~d~~~v~~l~~~~~ 204 (348)
||+++ .+++++++++.+.+.
T Consensus 94 gI~~P~V~s~~ev~~~~~~~~ 114 (256)
T 1dxe_A 94 NFLIPFVETKEEAELAVASTR 114 (256)
T ss_dssp EEEESCCCSHHHHHHHHHTTS
T ss_pred eeeecCcCCHHHHHHHHHHhc
Confidence 99885 457899988877764
No 10
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=88.60 E-value=0.91 Score=38.99 Aligned_cols=107 Identities=21% Similarity=0.204 Sum_probs=61.1
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceee-ee-eeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIAL-LD-PLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~-i~-~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vv 137 (348)
.+.+..+++.|++.+-+...+.+..+.+.++.. .. ++.+ +. ..+.++++.+.+.. . .++.+.
T Consensus 22 ~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~v-------------g~-g~~~~~~~i~~a~~-~-Gad~V~ 85 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALI-------------GA-GTVLKPEQVDALAR-M-GCQLIV 85 (212)
T ss_dssp HHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEE-------------EE-ECCCSHHHHHHHHH-T-TCCEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEE-------------Ee-ccccCHHHHHHHHH-c-CCCEEE
Confidence 677888999999998876544333333333221 00 1111 11 13456776555443 2 567776
Q ss_pred EeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 138 IDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 138 v~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
+...+. .++...+..+..++..+.|++|++. +.+.|+|.|.+.|.
T Consensus 86 ~~~~~~------~~~~~~~~~g~~~~~g~~t~~e~~~---a~~~G~d~v~v~~t 130 (212)
T 2v82_A 86 TPNIHS------EVIRRAVGYGMTVCPGCATATEAFT---ALEAGAQALKIFPS 130 (212)
T ss_dssp CSSCCH------HHHHHHHHTTCEEECEECSHHHHHH---HHHTTCSEEEETTH
T ss_pred eCCCCH------HHHHHHHHcCCCEEeecCCHHHHHH---HHHCCCCEEEEecC
Confidence 544332 2333333334456666899999854 46789999998653
No 11
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=88.50 E-value=1.7 Score=39.80 Aligned_cols=92 Identities=8% Similarity=0.076 Sum_probs=64.6
Q ss_pred CC-eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhh---cccCCCceEEEEcCCHHHHHHHHHHhhccc
Q 018935 108 DR-RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVA---SFQGSGKTVFAISKTPSEAQIFLEALEQGL 183 (348)
Q Consensus 108 gk-~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA---~~q~~~~~l~a~v~~~~eA~~al~~LE~G~ 183 (348)
|+ .++.+..+.+++..+.++.. ..|+++++..|- ....|.+.+ +++..+..++..++..+. .....+|+.|+
T Consensus 16 g~~~~g~~~~~~~p~~~e~a~~~--GaD~v~lDlE~~-~~~~~~~~~~~~a~~~~~~~~~VRv~~~~~-~~i~~~l~~g~ 91 (267)
T 2vws_A 16 GEVQIGLWLSSTTAYMAEIAATS--GYDWLLIDGEHA-PNTIQDLYHQLQAVAPYASQPVIRPVEGSK-PLIKQVLDIGA 91 (267)
T ss_dssp TCCEEEEEECSCCHHHHHHHHTT--CCSEEEEETTTS-CCCHHHHHHHHHHHTTSSSEEEEECSSCCH-HHHHHHHHTTC
T ss_pred CCCEEEEEEeCCCHHHHHHHHhC--CCCEEEEcCCCC-CCCHHHHHHHHHHHHhCCCcEEEEeCCCCH-HHHHHHHHhCC
Confidence 55 57888889999987776543 689999988875 345555433 333345568888775443 33456788999
Q ss_pred CeEEEec-CCHHHHHHHHHhh
Q 018935 184 GGIVLKV-EDVKAVLALKEYF 203 (348)
Q Consensus 184 DGVvl~~-~d~~~v~~l~~~~ 203 (348)
|||++.- +++++++++.+.+
T Consensus 92 ~~I~~P~V~s~ee~~~~~~~~ 112 (267)
T 2vws_A 92 QTLLIPMVDTAEQARQVVSAT 112 (267)
T ss_dssp CEEEECCCCSHHHHHHHHHHT
T ss_pred CEEEeCCCCCHHHHHHHHHHH
Confidence 9999964 5688888887765
No 12
>1am2_A MXE GYRA intein; protein splicing; 2.20A {Mycobacterium xenopi} SCOP: b.86.1.2
Probab=88.25 E-value=0.88 Score=40.00 Aligned_cols=59 Identities=20% Similarity=0.283 Sum_probs=45.8
Q ss_pred eEEEecCCceeeeeeccCCCe--------EEEEcCCCCeeEEeeeeEEeeccceeEEEEEECCEeeee
Q 018935 282 AYVLVPGGKTCYLSELKSGKE--------VIVVDQKGRQRTAVVGRVKIESRPLILVEAKVIKLFTAS 341 (348)
Q Consensus 282 aYv~~pggkT~YLSEL~aG~e--------VLvVd~~G~tR~~~VGRvKIE~RPLlLIeAe~~G~~~~~ 341 (348)
+-|.+++|++.-+.||..|++ |+.+|.+|+.... +.-.+-..+|++.|+.+.+-.+.+.
T Consensus 7 T~V~~~dG~~~~I~eL~~G~~~~~~~~v~v~~~d~~g~~~~~-~~~~~~g~k~~~~I~T~~G~~i~~T 73 (199)
T 1am2_A 7 ALVALPEGESVRIADIVPGARPNSDNAIDLKVLDRHGNPVLA-DRLFHSGEHPVYAVRTVEGLRVTGT 73 (199)
T ss_dssp CEEECSTTCEEEGGGSSTTCCTTEEEEEEEEEECTTSCEEEE-EEEEEEEEEEEEEEEETTSCEEEEC
T ss_pred eEEEcCCCCEEEHHHhhCccccccccceEEEEECCCCCEEEE-EEEEECCCceEEEEEECCCCEEEEe
Confidence 457889999999999999998 9999999987765 4334456788888887665555544
No 13
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=86.63 E-value=0.36 Score=44.37 Aligned_cols=143 Identities=11% Similarity=0.013 Sum_probs=86.1
Q ss_pred cEEEEEe-CchhHHHHHHHhCCcEEEEcCcc----hhhhhh-ccce--eeeee-eeecCCc--cc---cCCCCeeEEEEE
Q 018935 51 KRVWIWT-ESKQVMTAAVERGWNTFVFLSEN----QQLAID-WSTI--ALLDP-LFIKEGE--VY---DSGDRRVGSIIE 116 (348)
Q Consensus 51 K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~~----~e~~~~-l~~i--~~i~~-l~~~~g~--~~---~~~gk~v~~~~~ 116 (348)
--.|+.. .+.+.+..|..+|+|.++++-|| .+++.. +..+ .-..+ +-++..+ .+ -..|-....+=.
T Consensus 17 ~g~~~~~~~~p~~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~~~~~VRVn~~~~~di~~~ld~G~~gI~lP~ 96 (261)
T 3qz6_A 17 VGTMLNLVYNPDIVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAGVSVLVRIPQVDRAHVQRLLDIGAEGFMIPG 96 (261)
T ss_dssp EEEEESSCCCTTHHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHHHHTCCEEEETT
T ss_pred EEEEEecCCCHHHHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHHHhcCCCEEEECC
Confidence 3478888 88999999999999999999887 122111 1000 00111 1112111 11 011322223335
Q ss_pred ecChhhhhhhccccCC-----CCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhh-cccCeEEEec
Q 018935 117 VSTPQELQQLQPADGQ-----AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALE-QGLGGIVLKV 190 (348)
Q Consensus 117 v~~~ed~e~~~~~~~~-----~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE-~G~DGVvl~~ 190 (348)
|.+++|.+.+...... ..+-......|...|+++-++... .+..|++.+.+++-...+-+++. .|+||+.+-+
T Consensus 97 v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~-~~~~v~~mIEt~~av~~~~eIaa~~~vd~l~iG~ 175 (261)
T 3qz6_A 97 VQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERN-DEIFIMAQIEHVKAVEDIDSILAVQGVDAVIFGP 175 (261)
T ss_dssp CCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHH-TTCEEEEEECCHHHHHTHHHHHTSTTCCEEEECH
T ss_pred cCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCC-CCeEEEEEECCHHHHHHHHHHhCCCCCCEEEECH
Confidence 7788888876655421 011012233555556666666543 35789999999999999999997 4999999988
Q ss_pred CCHH
Q 018935 191 EDVK 194 (348)
Q Consensus 191 ~d~~ 194 (348)
.|..
T Consensus 176 ~DL~ 179 (261)
T 3qz6_A 176 RDLS 179 (261)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 14
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=86.10 E-value=4.1 Score=36.87 Aligned_cols=139 Identities=14% Similarity=0.058 Sum_probs=75.0
Q ss_pred EEEEEeCchhHHHHHHHhCCcEEEEcCcc----hhhhhhccce---eeeee-eeecCCc------cccCCCCeeEEEEEe
Q 018935 52 RVWIWTESKQVMTAAVERGWNTFVFLSEN----QQLAIDWSTI---ALLDP-LFIKEGE------VYDSGDRRVGSIIEV 117 (348)
Q Consensus 52 ~vWiw~~~K~~vT~ALEsG~~~~v~~~~~----~e~~~~l~~i---~~i~~-l~~~~g~------~~~~~gk~v~~~~~v 117 (348)
..|....+.+.+..|..+|+|.++++-|| ++.++..-.. .-..+ +-+.+.+ .++ .|..-..+=.|
T Consensus 22 ~~~l~v~~p~~~e~a~~~gaD~v~lDlEd~p~~~~~a~~~~~~~~~~~~~~~VRv~~~~~~~i~~~l~-~g~~gI~~P~V 100 (256)
T 1dxe_A 22 GCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLD-IGFYNFLIPFV 100 (256)
T ss_dssp EEEECSCSHHHHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTTCSSEEEEECSSSCHHHHHHHHH-TTCCEEEESCC
T ss_pred EEEEeCCCHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhCCCcEEEECCCCCHHHHHHHHh-cCCceeeecCc
Confidence 46777788999999999999999999766 2333221110 00001 1111110 111 12221223345
Q ss_pred cChhhhhhhccccCCCCe---EE---EeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhc-ccCeEEEec
Q 018935 118 STPQELQQLQPADGQAEN---IV---IDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQ-GLGGIVLKV 190 (348)
Q Consensus 118 ~~~ed~e~~~~~~~~~~~---vv---v~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~-G~DGVvl~~ 190 (348)
.+++|.+.+......... =+ .....|. +++..+... +.+..|++.+.+++-...+-+++.. |+||+.+-+
T Consensus 101 ~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g--~~~~~~~~~-~~~~~v~~~IEt~~av~~~~eIa~~~~vd~l~iG~ 177 (256)
T 1dxe_A 101 ETKEEAELAVASTRYPPEGIRGVSVSHRANMFG--TVADYFAQS-NKNITILVQIESQQGVDNVDAIAATEGVDGIFVGP 177 (256)
T ss_dssp CSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGG--TSTTHHHHH-TTSCEEEEEECSHHHHHTHHHHHTSTTCCEEEECH
T ss_pred CCHHHHHHHHHHhcCCCCCccCCCcchhhhhcC--chHHHHHhc-CcccEEEEEECCHHHHHhHHHHhCCCCCCEEEECh
Confidence 566666554443321000 00 0001122 122333222 2356899999999999999999875 999999988
Q ss_pred CCHH
Q 018935 191 EDVK 194 (348)
Q Consensus 191 ~d~~ 194 (348)
.|..
T Consensus 178 ~DL~ 181 (256)
T 1dxe_A 178 SDLA 181 (256)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 15
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=85.79 E-value=2.9 Score=39.13 Aligned_cols=113 Identities=12% Similarity=0.161 Sum_probs=69.2
Q ss_pred eCchhHHHHHHHhCCcEEEEcCc-chhhh-hhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccc-cCCC
Q 018935 57 TESKQVMTAAVERGWNTFVFLSE-NQQLA-IDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA-DGQA 133 (348)
Q Consensus 57 ~~~K~~vT~ALEsG~~~~v~~~~-~~e~~-~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~-~~~~ 133 (348)
..+.+++.++-+.|.-+++.... +.+.. +.+.++... .++++++-+-+.++...+.+... ....
T Consensus 37 vs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~-------------~~~p~gVnl~~~~~~~~~~~~~~~~~g~ 103 (326)
T 3bo9_A 37 AGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQK-------------TDKPFGVNIILVSPWADDLVKVCIEEKV 103 (326)
T ss_dssp TSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTT-------------CSSCEEEEEETTSTTHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-------------cCCCEEEEEeccCCCHHHHHHHHHHCCC
Confidence 45688999999999989986542 22221 122222110 12334444334333222222211 1367
Q ss_pred CeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 134 ENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 134 ~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
+.+.+.+.+ | ..++..+...+.+++..+.+.++|+.+ .+.|+|+|++..
T Consensus 104 d~V~l~~g~----p-~~~~~~l~~~g~~v~~~v~s~~~a~~a---~~~GaD~i~v~g 152 (326)
T 3bo9_A 104 PVVTFGAGN----P-TKYIRELKENGTKVIPVVASDSLARMV---ERAGADAVIAEG 152 (326)
T ss_dssp SEEEEESSC----C-HHHHHHHHHTTCEEEEEESSHHHHHHH---HHTTCSCEEEEC
T ss_pred CEEEECCCC----c-HHHHHHHHHcCCcEEEEcCCHHHHHHH---HHcCCCEEEEEC
Confidence 888887775 4 456777766678999999999998865 578999999965
No 16
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=85.46 E-value=9.7 Score=34.16 Aligned_cols=113 Identities=13% Similarity=0.068 Sum_probs=67.9
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~-~~ed~e~~~~~~~~~~~vvv 138 (348)
.++..++.+.|+.++-+.. .+..++..+..-+ |++-...+..+ |.. . -|+ +.++.+++. ...+|.+++
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~--~~~i~~ir~~v~~-Pvig~~k~~~~--~~~--~--~I~~~~~~i~~~~--~aGad~I~l 107 (229)
T 3q58_A 39 AAMAQAAASAGAVAVRIEG--IENLRTVRPHLSV-PIIGIIKRDLT--GSP--V--RITPYLQDVDALA--QAGADIIAF 107 (229)
T ss_dssp HHHHHHHHHTTCSEEEEES--HHHHHHHGGGCCS-CEEEECBCCCS--SCC--C--CBSCSHHHHHHHH--HHTCSEEEE
T ss_pred HHHHHHHHHCCCcEEEECC--HHHHHHHHHhcCC-CEEEEEeecCC--CCc--e--EeCccHHHHHHHH--HcCCCEEEE
Confidence 6778888999999998864 3444444332111 32200000000 100 0 122 334444432 236888888
Q ss_pred eCC---CCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEE
Q 018935 139 DLP---DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL 188 (348)
Q Consensus 139 ~~~---DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl 188 (348)
... ++ -.++.++..+...+-.+++.+.+.+||+.+ ++.|+|.|..
T Consensus 108 ~~~~~~~p--~~l~~~i~~~~~~g~~v~~~v~t~eea~~a---~~~Gad~Ig~ 155 (229)
T 3q58_A 108 DASFRSRP--VDIDSLLTRIRLHGLLAMADCSTVNEGISC---HQKGIEFIGT 155 (229)
T ss_dssp ECCSSCCS--SCHHHHHHHHHHTTCEEEEECSSHHHHHHH---HHTTCSEEEC
T ss_pred CccccCCh--HHHHHHHHHHHHCCCEEEEecCCHHHHHHH---HhCCCCEEEe
Confidence 764 23 367888888877677899999999999765 5789999964
No 17
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=84.02 E-value=0.96 Score=45.70 Aligned_cols=135 Identities=12% Similarity=0.101 Sum_probs=89.5
Q ss_pred CchhHHH--HHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 018935 58 ESKQVMT--AAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (348)
Q Consensus 58 ~~K~~vT--~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~ 134 (348)
.|++.+. .|+|.|+|.|.++. .+++.+.++.++ +.+.|..+..+.+|.+++-++.+..-....|
T Consensus 182 kD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~-------------l~~~g~~~~iiaKIE~~eav~nldeIl~~sD 248 (461)
T 3qtg_A 182 EDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSL-------------LTELGFQSQVAVKIETKGAVNNLEELVQCSD 248 (461)
T ss_dssp HHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHH-------------HHHTTCCCEEEEEECSHHHHHTHHHHHHTCS
T ss_pred HHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHH-------------HHhcCCCceEEEEECCHHHHHhHHHHHHhcc
Confidence 4688888 99999999988874 334555544443 3333455778889999999888776666678
Q ss_pred eEEEeCCCCe-eeehhhh-------hhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC---
Q 018935 135 NIVIDLPDWQ-VIPAENI-------VASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED--- 192 (348)
Q Consensus 135 ~vvv~~~DW~-iIPlENl-------iA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d--- 192 (348)
-++|-.-|-- =||+|.+ |.+....+.-++.. ..+-.|+--...+.--|+|+|+|..+.
T Consensus 249 gImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G 328 (461)
T 3qtg_A 249 YVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASG 328 (461)
T ss_dssp EEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTS
T ss_pred cEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCC
Confidence 8888433321 2355554 33332233334431 345688888899999999999998432
Q ss_pred ---HHHHHHHHHhhcc
Q 018935 193 ---VKAVLALKEYFDG 205 (348)
Q Consensus 193 ---~~~v~~l~~~~~~ 205 (348)
.+.|+-+.+++.+
T Consensus 329 ~yPveaV~~m~~I~~~ 344 (461)
T 3qtg_A 329 KYPLAAVSWLSRILMN 344 (461)
T ss_dssp SCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHH
Confidence 3667777777754
No 18
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=84.00 E-value=0.93 Score=42.14 Aligned_cols=114 Identities=12% Similarity=0.122 Sum_probs=59.5
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEe-cChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV-STPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v-~~~ed~e~~~~~~~~~~~vvv 138 (348)
...+..+.|.|+|+++++.-..+...++... .+..|.....++.- ++.|.++.++.... +++-+
T Consensus 113 e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~-------------~~~~gl~~i~liaP~t~~eri~~i~~~~~--gfvY~ 177 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIADVPVEESAPFSKA-------------AKAHGIAPIFIAPPNADADTLKMVSEQGE--GYTYL 177 (267)
T ss_dssp HHHHHHHHHHTCCEEEETTSCGGGCHHHHHH-------------HHHTTCEEECEECTTCCHHHHHHHHHHCC--SCEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCCHhhHHHHHHH-------------HHHcCCeEEEEECCCCCHHHHHHHHHhCC--CcEEE
Confidence 5688999999999999986433322222222 12223332222222 33455555555432 33333
Q ss_pred -eC---C--CCeee-ehhhhhhcccCCCc-eEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 139 -DL---P--DWQVI-PAENIVASFQGSGK-TVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 139 -~~---~--DW~iI-PlENliA~~q~~~~-~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
.. + .-.+. +++++++++..... .|+. .++++++|+ ..++.|+|||++-+.
T Consensus 178 vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~---~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 178 LSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVR---AAIKAGAAGAISGSA 237 (267)
T ss_dssp SCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHH---HHHHTTCSEEEECHH
T ss_pred EecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH---HHHHcCCCEEEECHH
Confidence 11 1 11122 36777877654322 2322 345666665 456789999999763
No 19
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=83.76 E-value=4.2 Score=36.55 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=59.8
Q ss_pred hhHHHHHHHhCCcEEEEcCc-------chhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 018935 60 KQVMTAAVERGWNTFVFLSE-------NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~-------~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~ 132 (348)
.+.+..+++.|+|.+++... -.+..+...+. |.. ..+.+.+.++.+.+.. ..
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~-----------------g~~--v~~~v~t~eea~~a~~--~G 149 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH-----------------HLL--TMADCSSVDDGLACQR--LG 149 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT-----------------TCE--EEEECCSHHHHHHHHH--TT
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC-----------------CCE--EEEeCCCHHHHHHHHh--CC
Confidence 44578899999998876431 12333333222 322 4457778777655432 25
Q ss_pred CCeEEEeCCCCe-----eeehhhhhhcccCCCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 018935 133 AENIVIDLPDWQ-----VIPAENIVASFQGSGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 133 ~~~vvv~~~DW~-----iIPlENliA~~q~~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
++++.+...+.+ --|--+++.++...+..+++. +++.++++.++ +.|+|||++-+
T Consensus 150 ad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~t~~d~~~~~---~~GadgV~VGs 211 (232)
T 3igs_A 150 ADIIGTTMSGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYNSPALAAEAI---RYGAWAVTVGS 211 (232)
T ss_dssp CSEEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEESCCCSHHHHHHHH---HTTCSEEEECH
T ss_pred CCEEEEcCccCCCCCCCCCCCHHHHHHHHhcCCcEEEECCCCCHHHHHHHH---HcCCCEEEEeh
Confidence 777765322211 112112333332224567766 45788887665 56999999864
No 20
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=83.63 E-value=12 Score=33.57 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=67.1
Q ss_pred hhHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeEE
Q 018935 60 KQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENIV 137 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~-~~ed~e~~~~~~~~~~~vv 137 (348)
.++..++.+.|+.++.+.. ++...+++.-++-++... .++ .. |.. +-|. +.++.+++. ...+|.++
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~~~~i~~ir~~v~~Pvig~~-k~d---~~--~~~----~~I~~~~~~i~~~~--~~Gad~V~ 106 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRIEGIDNLRMTRSLVSVPIIGII-KRD---LD--ESP----VRITPFLDDVDALA--QAGAAIIA 106 (232)
T ss_dssp HHHHHHHHHTTCSEEEEESHHHHHHHHTTCCSCEEEEC-BCC---CS--SCC----CCBSCSHHHHHHHH--HHTCSEEE
T ss_pred HHHHHHHHHCCCeEEEECCHHHHHHHHHhcCCCEEEEE-eec---CC--Ccc----eEeCccHHHHHHHH--HcCCCEEE
Confidence 6778888999999998864 223333333333221100 010 00 100 0112 334444432 23688888
Q ss_pred EeCC---CCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEE
Q 018935 138 IDLP---DWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL 188 (348)
Q Consensus 138 v~~~---DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl 188 (348)
+... ++ -.++.++..+...+-.+++.+.+.+||+.+ ++.|+|.|..
T Consensus 107 l~~~~~~~p--~~l~~~i~~~~~~g~~v~~~v~t~eea~~a---~~~Gad~Ig~ 155 (232)
T 3igs_A 107 VDGTARQRP--VAVEALLARIHHHHLLTMADCSSVDDGLAC---QRLGADIIGT 155 (232)
T ss_dssp EECCSSCCS--SCHHHHHHHHHHTTCEEEEECCSHHHHHHH---HHTTCSEEEC
T ss_pred ECccccCCH--HHHHHHHHHHHHCCCEEEEeCCCHHHHHHH---HhCCCCEEEE
Confidence 8764 23 357788888876677899999999999755 5789999964
No 21
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=83.57 E-value=1.6 Score=42.18 Aligned_cols=41 Identities=20% Similarity=0.104 Sum_probs=35.6
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 018935 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (348)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~ 203 (348)
.+|..+|.|.+|++. +++.|+|+|+|+.-+++++++..+.+
T Consensus 232 ~kIeVEVdtldea~e---Al~aGaD~I~LDn~~~~~l~~av~~l 272 (320)
T 3paj_A 232 KPVEVETETLAELEE---AISAGADIIMLDNFSLEMMREAVKIN 272 (320)
T ss_dssp SCEEEEESSHHHHHH---HHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CeEEEEECCHHHHHH---HHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 579999999999875 45679999999999999998887766
No 22
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=82.83 E-value=2.5 Score=40.52 Aligned_cols=91 Identities=19% Similarity=0.205 Sum_probs=63.9
Q ss_pred eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhc---ccCCC---ceEEEEcCCHHHHHHHHHHhhccc
Q 018935 110 RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVAS---FQGSG---KTVFAISKTPSEAQIFLEALEQGL 183 (348)
Q Consensus 110 ~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~---~q~~~---~~l~a~v~~~~eA~~al~~LE~G~ 183 (348)
.++.+..+.+++..+.++.. ..|+++++..|. ....|.+... ++..+ ..++..+++.+.. ..-.+|+.|+
T Consensus 43 ~ig~~l~i~~p~~~e~a~~~--GaD~vilDlEha-~~~~e~~~~~l~a~~~~~~~~~~~~VRv~~~~~~-di~~~LdaGa 118 (339)
T 1izc_A 43 LMGVAHGIPSTFVTKVLAAT--KPDFVWIDVEHG-MFNRLELHDAIHAAQHHSEGRSLVIVRVPKHDEV-SLSTALDAGA 118 (339)
T ss_dssp EEEEEECSCCHHHHHHHHHT--CCSEEEEETTTS-CCCHHHHHHHHHHHHHHTTTCSEEEEECCTTCHH-HHHHHHHHTC
T ss_pred EEEEEEECCCHHHHHHHHhC--CCCEEEEECCCC-CCcHHHHHHHHHHhhhcCCCCCeEEEEeCCCCHH-HHHHHHhCCC
Confidence 46777788888887776543 589999988873 3455554433 22112 5688888877654 4566788999
Q ss_pred CeEEEe-cCCHHHHHHHHHhhc
Q 018935 184 GGIVLK-VEDVKAVLALKEYFD 204 (348)
Q Consensus 184 DGVvl~-~~d~~~v~~l~~~~~ 204 (348)
+||++. .+++++++++++.+.
T Consensus 119 ~gImlP~V~saee~~~~~~~~~ 140 (339)
T 1izc_A 119 AGIVIPHVETVEEVREFVKEMY 140 (339)
T ss_dssp SEEEETTCCCHHHHHHHHHHHS
T ss_pred CEEEeCCCCCHHHHHHHHHHhc
Confidence 999985 456899998888764
No 23
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=82.14 E-value=1.4 Score=40.07 Aligned_cols=114 Identities=8% Similarity=0.081 Sum_probs=57.8
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEe-cChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV-STPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v-~~~ed~e~~~~~~~~~~~vvv 138 (348)
.+.+..+.+.|+|+++++....+...++-+. .++.|.....++.- ++.+.++.++.... +++.+
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~e~~~~~~~~-------------~~~~g~~~i~l~~p~t~~~~i~~i~~~~~--g~v~~ 176 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPVEESAPFRQA-------------ALRHNIAPIFICPPNADDDLLRQVASYGR--GYTYL 176 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCGGGCHHHHHH-------------HHHTTCEEECEECTTCCHHHHHHHHHHCC--SCEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCHHHHHHHHHH-------------HHHcCCcEEEEECCCCCHHHHHHHHhhCC--CcEEE
Confidence 5788899999999999986543222222111 12223322222222 33455555555432 23333
Q ss_pred e----CCC---CeeeehhhhhhcccCC-CceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 139 D----LPD---WQVIPAENIVASFQGS-GKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 139 ~----~~D---W~iIPlENliA~~q~~-~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
. +++ -..-++..+|+.+.+. +..|+. .++++++++ .+++.|+|||++-+.
T Consensus 177 ~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~---~~~~agAD~vVVGSa 236 (268)
T 1qop_A 177 LSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVS---AAVRAGAAGAISGSA 236 (268)
T ss_dssp ESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHH---HHHHTTCSEEEECHH
T ss_pred EecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHH---HHHHcCCCEEEEChH
Confidence 2 111 1123455566665432 223332 245566555 456889999998643
No 24
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=81.22 E-value=0.85 Score=46.47 Aligned_cols=134 Identities=18% Similarity=0.201 Sum_probs=86.9
Q ss_pred CchhHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 018935 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v 136 (348)
+|++.+..|+|.|+|.|.++. .+++.++++.++ +.+.|+.+..+.+|.+++-++.+..-....|-+
T Consensus 193 kD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~-------------l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgI 259 (499)
T 3hqn_D 193 KDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKA-------------LGPKGRDIMIICKIENHQGVQNIDSIIEESDGI 259 (499)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH-------------HCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHH-------------HHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcE
Confidence 578889999999999988874 334555554443 222345567888999999888766655557888
Q ss_pred EEeCCCCe-eeehhhh-------hhcccCCCceEEE-----------EcCCHHHHHHHHHHhhcccCeEEEecCC-----
Q 018935 137 VIDLPDWQ-VIPAENI-------VASFQGSGKTVFA-----------ISKTPSEAQIFLEALEQGLGGIVLKVED----- 192 (348)
Q Consensus 137 vv~~~DW~-iIPlENl-------iA~~q~~~~~l~a-----------~v~~~~eA~~al~~LE~G~DGVvl~~~d----- 192 (348)
+|-.-|-- =||+|.+ |.+....+.-++. ...+-.|+--...+.--|+|+|+|..+.
T Consensus 260 mVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgETA~G~y 339 (499)
T 3hqn_D 260 MVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKY 339 (499)
T ss_dssp EEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC
T ss_pred EEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEeccccCCCC
Confidence 88443432 2466654 3332222223443 1245678888899999999999996543
Q ss_pred -HHHHHHHHHhhc
Q 018935 193 -VKAVLALKEYFD 204 (348)
Q Consensus 193 -~~~v~~l~~~~~ 204 (348)
.+.|+-+.+++.
T Consensus 340 PveaV~~m~~I~~ 352 (499)
T 3hqn_D 340 PNEVVQYMARICL 352 (499)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 356666666664
No 25
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=81.18 E-value=1.6 Score=44.02 Aligned_cols=135 Identities=17% Similarity=0.208 Sum_probs=86.5
Q ss_pred CchhHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCC-CCeeEEEEEecChhhhhhhccccCCCCe
Q 018935 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSG-DRRVGSIIEVSTPQELQQLQPADGQAEN 135 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~-gk~v~~~~~v~~~ed~e~~~~~~~~~~~ 135 (348)
.+++.+..+++.|+|.|+++. ++++.++++.++ +... |..+..+.+|.+++-++.+..-....|-
T Consensus 173 kD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~-------------l~~~~~~~i~IiakIEt~eav~nldeI~~~sDg 239 (470)
T 1e0t_A 173 KDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREH-------------LKAHGGENIHIISKIENQEGLNNFDEILEASDG 239 (470)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHH-------------HHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-------------HHHhcCCCceEEEEECCHHHHHhHHHHHHHCCE
Confidence 467889999999999999986 345555555443 2233 4457788899999988776665555777
Q ss_pred EEEeCCCCe-eeehhh-------hhhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCCH---
Q 018935 136 IVIDLPDWQ-VIPAEN-------IVASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVEDV--- 193 (348)
Q Consensus 136 vvv~~~DW~-iIPlEN-------liA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d~--- 193 (348)
+++-..|-- =||+|. +|.+....+.-++.. ..+-.|+--...+.--|+|+|+|..+..
T Consensus 240 ImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~ 319 (470)
T 1e0t_A 240 IMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGK 319 (470)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC-----
T ss_pred EEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCC
Confidence 777443332 144444 333332222233331 1334688888888889999999976653
Q ss_pred ---HHHHHHHHhhcc
Q 018935 194 ---KAVLALKEYFDG 205 (348)
Q Consensus 194 ---~~v~~l~~~~~~ 205 (348)
+.|+-+.+++.+
T Consensus 320 yPveaV~~m~~I~~~ 334 (470)
T 1e0t_A 320 YPLEAVSIMATICER 334 (470)
T ss_dssp -CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 467666776654
No 26
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=81.00 E-value=1.4 Score=45.45 Aligned_cols=134 Identities=16% Similarity=0.191 Sum_probs=87.2
Q ss_pred CchhHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 018935 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v 136 (348)
.|++.+..|+|.|+|.|.++. .+++.++++.++ +.+.|+.+..+.+|.+++-++.+..-....|-+
T Consensus 243 kD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~~-------------L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgI 309 (550)
T 3gr4_A 243 KDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKV-------------LGEKGKNIKIISKIENHEGVRRFDEILEASDGI 309 (550)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH-------------HTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHH-------------HHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEE
Confidence 478889999999999888874 234455544443 333455677888999999888766655557888
Q ss_pred EEeCCCCe-eeehhhh-------hhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC-----
Q 018935 137 VIDLPDWQ-VIPAENI-------VASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED----- 192 (348)
Q Consensus 137 vv~~~DW~-iIPlENl-------iA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d----- 192 (348)
+|-.-|-- =||+|.+ |.+....+.-++.. ..+-.|+--.+.+.--|+|+|+|..+.
T Consensus 310 mVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~y 389 (550)
T 3gr4_A 310 MVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDY 389 (550)
T ss_dssp EEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSC
T ss_pred EEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCC
Confidence 88433322 2455553 33322222234431 235688888899999999999996543
Q ss_pred -HHHHHHHHHhhc
Q 018935 193 -VKAVLALKEYFD 204 (348)
Q Consensus 193 -~~~v~~l~~~~~ 204 (348)
.+.|+-+.+++.
T Consensus 390 PveaV~~M~~I~~ 402 (550)
T 3gr4_A 390 PLEAVRMQHLIAR 402 (550)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 366666666664
No 27
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=80.99 E-value=3.3 Score=35.18 Aligned_cols=121 Identities=18% Similarity=0.134 Sum_probs=70.3
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~ 139 (348)
.+++..+.+.|++.+-+.-+.....+.+..+... .+ +++.++.- .+.++++.+.+.. ..+|++ +
T Consensus 25 ~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~----------~~-~~~~ig~~-~v~~~~~~~~a~~--~Gad~i-v- 88 (205)
T 1wa3_A 25 KEKALAVFEGGVHLIEITFTVPDADTVIKELSFL----------KE-KGAIIGAG-TVTSVEQCRKAVE--SGAEFI-V- 88 (205)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHH----------HH-TTCEEEEE-SCCSHHHHHHHHH--HTCSEE-E-
T ss_pred HHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHH----------CC-CCcEEEec-ccCCHHHHHHHHH--cCCCEE-E-
Confidence 5677888889999886643321111112222111 01 12333321 3467777554443 367888 4
Q ss_pred CCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 018935 140 LPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (348)
Q Consensus 140 ~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~ 203 (348)
...|. .+++..++..+..++..+.+.+|++. +++.|+|.|-+.+.++..+..++++.
T Consensus 89 ~~~~~----~~~~~~~~~~g~~vi~g~~t~~e~~~---a~~~Gad~vk~~~~~~~g~~~~~~l~ 145 (205)
T 1wa3_A 89 SPHLD----EEISQFCKEKGVFYMPGVMTPTELVK---AMKLGHTILKLFPGEVVGPQFVKAMK 145 (205)
T ss_dssp CSSCC----HHHHHHHHHHTCEEECEECSHHHHHH---HHHTTCCEEEETTHHHHHHHHHHHHH
T ss_pred cCCCC----HHHHHHHHHcCCcEECCcCCHHHHHH---HHHcCCCEEEEcCccccCHHHHHHHH
Confidence 33333 45666666667789998989998765 57999999988875444444444443
No 28
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=80.63 E-value=9.4 Score=34.73 Aligned_cols=89 Identities=18% Similarity=0.211 Sum_probs=50.2
Q ss_pred CCeeEEEEEecChhhhhhhccccCCCCeEEEeCCCC-------eeeehhhhhhcccC--CCceEEEEcC-CHHHHHHHHH
Q 018935 108 DRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDW-------QVIPAENIVASFQG--SGKTVFAISK-TPSEAQIFLE 177 (348)
Q Consensus 108 gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW-------~iIPlENliA~~q~--~~~~l~a~v~-~~~eA~~al~ 177 (348)
++.++. .+.+.++.+.+.. ..+||+.+..--. ..+.+|.+-...+. .+..+++.-. +.+++ -+
T Consensus 135 ~~~iG~--S~ht~~Ea~~A~~--~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni---~~ 207 (243)
T 3o63_A 135 DTLIGR--STHDPDQVAAAAA--GDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGINAQRL---PA 207 (243)
T ss_dssp TCEEEE--EECSHHHHHHHHH--SSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSCCTTTH---HH
T ss_pred CCEEEE--eCCCHHHHHHHhh--CCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCCCHHHH---HH
Confidence 455554 4678877655443 3689999943111 13455544332222 2455776633 44444 45
Q ss_pred HhhcccCeEEE-----ecCCHH-HHHHHHHhh
Q 018935 178 ALEQGLGGIVL-----KVEDVK-AVLALKEYF 203 (348)
Q Consensus 178 ~LE~G~DGVvl-----~~~d~~-~v~~l~~~~ 203 (348)
+++.|+|||.+ ..+||. .+++|++.+
T Consensus 208 ~~~aGa~gvav~sai~~a~dp~~a~~~l~~~~ 239 (243)
T 3o63_A 208 VLDAGARRIVVVRAITSADDPRAAAEQLRSAL 239 (243)
T ss_dssp HHHTTCCCEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 67899999997 456774 445555544
No 29
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=80.48 E-value=1.4 Score=45.57 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=86.7
Q ss_pred CchhHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCC-CeeEEEEEecChhhhhhhccccCCCCe
Q 018935 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGD-RRVGSIIEVSTPQELQQLQPADGQAEN 135 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~g-k~v~~~~~v~~~ed~e~~~~~~~~~~~ 135 (348)
.|++.+.-|++.|+|.+.++. .+++.++++.++ +...| ..+..+.+|.+++-++.+-.-....|-
T Consensus 174 kD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~-------------l~~~~~~~~~iiakIE~~eav~nldeIl~~~Dg 240 (587)
T 2e28_A 174 KDRADILFGIRQGIDFIAASFVRRASDVLEIREL-------------LEAHDALHIQIIAKIENEEGVANIDEILEAADG 240 (587)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHH-------------HHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred ccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-------------HHHcCCCCceEEEEECCHHHHHhHHHHHHhCCE
Confidence 478889999999999999885 345566655544 12223 256788899999988776665555688
Q ss_pred EEEeCCCCe-eeehh-------hhhhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC----
Q 018935 136 IVIDLPDWQ-VIPAE-------NIVASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED---- 192 (348)
Q Consensus 136 vvv~~~DW~-iIPlE-------NliA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d---- 192 (348)
+.|---|-- =||+| .+|++....+.-++.. ..+-.|+--...+.--|+|+|+|..+.
T Consensus 241 ImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~ 320 (587)
T 2e28_A 241 LMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQ 320 (587)
T ss_dssp EEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS
T ss_pred EEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCC
Confidence 887433321 13334 4555443333334432 123468888888888999999996543
Q ss_pred -H-HHHHHHHHhhcc
Q 018935 193 -V-KAVLALKEYFDG 205 (348)
Q Consensus 193 -~-~~v~~l~~~~~~ 205 (348)
| +.|+-+.+++.+
T Consensus 321 yPveaV~~m~~I~~~ 335 (587)
T 2e28_A 321 YPVEAVKTMHQIALR 335 (587)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 2 556666666643
No 30
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=80.43 E-value=3.9 Score=35.96 Aligned_cols=92 Identities=14% Similarity=0.149 Sum_probs=52.5
Q ss_pred eeeEEEEEEEEEcCCcc-eEEEeec-----CCCCCCceEEEeccCceEEEEeeccccCCCC-CCCCeeeecCCceeEEEe
Q 018935 214 SLMKATVTRVDVAGMGD-RVCVDLC-----SLMRPGEGLLVGSFARGLFLVHSECLESNYI-ASRPFRVNAGPVHAYVLV 286 (348)
Q Consensus 214 ~L~~atVt~V~~vGmGd-RVCVDtc-----sll~~GEGmLVGS~S~glFLVhsEt~es~Yv-a~RPFRVNAGaVHaYv~~ 286 (348)
...+++|++++.+.-.- ++.+..- --+.||+=+.|--. ...+....||. ++-|- +.|-++=.|..
T Consensus 15 ~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~------~~g~~~~R~ySi~s~~~--~~~~~~l~vk~ 86 (275)
T 1umk_A 15 IKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSAR------IDGNLVVRPYTPISSDD--DKGFVDLVIKV 86 (275)
T ss_dssp CCEEEEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEE------ETTEEEEEEECCSSCTT--CCSEEEEEEEC
T ss_pred ccEEEEEEEEEEcCCCeEEEEEEcCCcccccCCCCCcEEEEEEe------eCCcEEEeccccCCccC--CCCeEEEEEEE
Confidence 45678999999886432 2344321 12345543332100 01111223442 22221 34555556665
Q ss_pred c-----------CCceeeeeeccCCCeEEEEcCCCCee
Q 018935 287 P-----------GGKTCYLSELKSGKEVIVVDQKGRQR 313 (348)
Q Consensus 287 p-----------ggkT~YLSEL~aG~eVLvVd~~G~tR 313 (348)
- |.-|+||.+|+.||+|.+-...|+..
T Consensus 87 ~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~gP~G~~~ 124 (275)
T 1umk_A 87 YFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLV 124 (275)
T ss_dssp CCSSSBTTBTTCCHHHHHHHHCCTTCEEEEEEEECSEE
T ss_pred eccCcccccCCCChhHHHHhcCCCCCEEEEEcCccceE
Confidence 3 66799999999999999988888753
No 31
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=80.03 E-value=1.8 Score=40.44 Aligned_cols=114 Identities=9% Similarity=0.120 Sum_probs=59.3
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~-~~ed~e~~~~~~~~~~~vvv 138 (348)
.+.+..|.|.|+|+++++.-..+...++... .+..|.....++.-+ +.|.++.++... .+++-+
T Consensus 115 ~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~-------------~~~~gl~~I~lvap~t~~eri~~i~~~~--~gfiY~ 179 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIADVPTNESQPFVAA-------------AEKFGIQPIFIAPPTASDETLRAVAQLG--KGYTYL 179 (271)
T ss_dssp HHHHHHHHHHTCCEEEETTSCGGGCHHHHHH-------------HHHTTCEEEEEECTTCCHHHHHHHHHHC--CSCEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHHHH-------------HHHcCCeEEEEECCCCCHHHHHHHHHHC--CCeEEE
Confidence 5678999999999999875322222222222 122233332333333 345555555543 233332
Q ss_pred ------eCCCCee-eehhhhhhcccCC-CceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 139 ------DLPDWQV-IPAENIVASFQGS-GKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 139 ------~~~DW~i-IPlENliA~~q~~-~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
.+..-.+ -+++.+++.+... +..++. .++++++|+ ..++.|+|||++-+.
T Consensus 180 vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~---~~~~~gADgvIVGSA 239 (271)
T 3nav_A 180 LSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVK---QAIEAGAAGAISGSA 239 (271)
T ss_dssp CCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHH---HHHHTTCSEEEESHH
T ss_pred EeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHH---HHHHcCCCEEEECHH
Confidence 1222111 2356677765432 223332 466777775 356789999998663
No 32
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=79.91 E-value=1.5 Score=39.86 Aligned_cols=113 Identities=12% Similarity=0.103 Sum_probs=56.4
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEe-cChhhhhhhccccCCCCeEE-
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV-STPQELQQLQPADGQAENIV- 137 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v-~~~ed~e~~~~~~~~~~~vv- 137 (348)
.+.+..|.+.|+|+++++.-..+...++.+.. ++.|..+..++.- ++.+.++.++......-|.+
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~-------------~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs 178 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLPPEEAEELKAVM-------------KKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVS 178 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCCHHHHHHHHHHH-------------HHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHcCCCEEEECCCCHHHHHHHHHHH-------------HHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEe
Confidence 56778899999999999864333333332221 1122221122222 34455566655543322222
Q ss_pred ---EeCCCCeee---ehhhhhhcccCC-CceEEE--EcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 138 ---IDLPDWQVI---PAENIVASFQGS-GKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 138 ---v~~~DW~iI---PlENliA~~q~~-~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
+.+.. +-. ++.++++.+.+. +..|+. -+++++.++. +..|+|||++-+
T Consensus 179 ~~g~TG~~-~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~----~~~gADgvIVGS 235 (262)
T 2ekc_A 179 VTGTTGAR-EKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE----IGSFADGVVVGS 235 (262)
T ss_dssp SCC----------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH----HHTTSSEEEECH
T ss_pred cCCccCCC-CCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH----HHcCCCEEEECH
Confidence 11111 122 255677766432 223433 3466776655 577899999854
No 33
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=79.84 E-value=5.3 Score=37.17 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=30.7
Q ss_pred CceEEEEcCCHHHHHHHHHHhhc-ccCeEEEecCCHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQ-GLGGIVLKVEDVK 194 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~-G~DGVvl~~~d~~ 194 (348)
...|++.+.+++-...+-+++.. |+||+.+-+.|..
T Consensus 166 ~~~vi~mIEt~~av~n~deIaa~~~vD~l~iG~~DLs 202 (287)
T 2v5j_A 166 QMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLS 202 (287)
T ss_dssp HCEEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHH
T ss_pred CcEEEEEECcHHHHHHHHHHhCcCCCCEEEECHHHHH
Confidence 35799999999999999999975 9999999887653
No 34
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=79.70 E-value=4.6 Score=37.31 Aligned_cols=111 Identities=16% Similarity=0.140 Sum_probs=64.9
Q ss_pred CchhHHHHHHHhCCcEEEEcCc--ch-hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEec----Chh--hhhhhcc
Q 018935 58 ESKQVMTAAVERGWNTFVFLSE--NQ-QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS----TPQ--ELQQLQP 128 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~--~~-e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~----~~e--d~e~~~~ 128 (348)
.+.+++.++.+.|.-+++.... +. +..+.+.++.... ++++++-+-+. .++ +.-..+.
T Consensus 27 s~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~-------------~~p~~v~l~v~~~~~~~~~~~~~~~~~ 93 (328)
T 2gjl_A 27 GRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELT-------------DRPFGVNLTLLPTQKPVPYAEYRAAII 93 (328)
T ss_dssp CSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHC-------------SSCCEEEEEECCCSSCCCHHHHHHHHH
T ss_pred CcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhc-------------CCCeEEEEeccccccCccHHHHHHHHH
Confidence 3578899999999888886531 11 2222222221110 11122222222 122 2112222
Q ss_pred ccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 129 ADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 129 ~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
. ...+.+.+.+.+ | ..++..+...+..++..+.+.++|+. +.+.|+|+|++..
T Consensus 94 ~-~g~d~V~~~~g~----p-~~~~~~l~~~gi~vi~~v~t~~~a~~---~~~~GaD~i~v~g 146 (328)
T 2gjl_A 94 E-AGIRVVETAGND----P-GEHIAEFRRHGVKVIHKCTAVRHALK---AERLGVDAVSIDG 146 (328)
T ss_dssp H-TTCCEEEEEESC----C-HHHHHHHHHTTCEEEEEESSHHHHHH---HHHTTCSEEEEEC
T ss_pred h-cCCCEEEEcCCC----c-HHHHHHHHHcCCCEEeeCCCHHHHHH---HHHcCCCEEEEEC
Confidence 2 267888887765 4 46677776667789999999999875 5678999999954
No 35
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=79.67 E-value=6.9 Score=35.73 Aligned_cols=36 Identities=14% Similarity=0.290 Sum_probs=30.3
Q ss_pred CceEEEEcCCHHHHHHHHHHhhc-ccCeEEEecCCHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQ-GLGGIVLKVEDVK 194 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~-G~DGVvl~~~d~~ 194 (348)
...|++.+.+++-...+-+++.. |+||+.+-+.|..
T Consensus 145 ~~~v~~~IEt~~av~~~~eIa~~~gvd~l~iG~~DL~ 181 (267)
T 2vws_A 145 SLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLS 181 (267)
T ss_dssp HCEEEEECCSHHHHHTHHHHHTSTTCCEEEECHHHHH
T ss_pred ccEEEEEECCHHHHHHHHHHhCCCCCCEEEEChHHHH
Confidence 35799999999999888888875 8999999887653
No 36
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=79.59 E-value=12 Score=34.87 Aligned_cols=122 Identities=15% Similarity=0.184 Sum_probs=72.5
Q ss_pred chhHHHHHHHhCCcEEEEcCcch--hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 018935 59 SKQVMTAAVERGWNTFVFLSENQ--QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~~--e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v 136 (348)
+...+..|.+.|+|+++...... +..+++-..+ ..-|. -+++++.+.++++.+... ..+.+
T Consensus 131 d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a-------------~~lGl--~~lvevh~~eEl~~A~~~--ga~iI 193 (272)
T 3tsm_A 131 DPYQVYEARSWGADCILIIMASVDDDLAKELEDTA-------------FALGM--DALIEVHDEAEMERALKL--SSRLL 193 (272)
T ss_dssp STHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHH-------------HHTTC--EEEEEECSHHHHHHHTTS--CCSEE
T ss_pred CHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHH-------------HHcCC--eEEEEeCCHHHHHHHHhc--CCCEE
Confidence 45568889999999988764211 1111111111 11132 367789999998776542 56777
Q ss_pred EEeCCCCee--eehh---hhhhcccCCCceEEEEc--CCHHHHHHHHHHhhcccCeEEE-----ecCCHHHHHHHHHhh
Q 018935 137 VIDLPDWQV--IPAE---NIVASFQGSGKTVFAIS--KTPSEAQIFLEALEQGLGGIVL-----KVEDVKAVLALKEYF 203 (348)
Q Consensus 137 vv~~~DW~i--IPlE---NliA~~q~~~~~l~a~v--~~~~eA~~al~~LE~G~DGVvl-----~~~d~~~v~~l~~~~ 203 (348)
=++.+|-+- +.++ .|+..+. .+.-++++. +++++++.+ ++.|+|||++ +++||.+ .+++++
T Consensus 194 Ginnr~l~t~~~dl~~~~~L~~~ip-~~~~vIaesGI~t~edv~~l---~~~Ga~gvLVG~almr~~d~~~--~~~~l~ 266 (272)
T 3tsm_A 194 GVNNRNLRSFEVNLAVSERLAKMAP-SDRLLVGESGIFTHEDCLRL---EKSGIGTFLIGESLMRQHDVAA--ATRALL 266 (272)
T ss_dssp EEECBCTTTCCBCTHHHHHHHHHSC-TTSEEEEESSCCSHHHHHHH---HTTTCCEEEECHHHHTSSCHHH--HHHHHH
T ss_pred EECCCCCccCCCChHHHHHHHHhCC-CCCcEEEECCCCCHHHHHHH---HHcCCCEEEEcHHHcCCcCHHH--HHHHHH
Confidence 777655332 2233 4554443 234566654 678888765 6899999998 5677754 344444
No 37
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=79.33 E-value=2.8 Score=42.99 Aligned_cols=139 Identities=14% Similarity=0.170 Sum_probs=89.4
Q ss_pred hHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 018935 61 QVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (348)
Q Consensus 61 ~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~ 139 (348)
+++.-|+|-|+|.|-+.. .+++.+.++.++ .-+.|....+.+..+..+-+|.+++.++.+..-....|-++|.
T Consensus 220 D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~------l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVA 293 (526)
T 4drs_A 220 DIVDFALKYNLDFIALSFVQNGADVQLCRQI------ISENTQYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVA 293 (526)
T ss_dssp HHHHTTTTTTCSEEEETTCCSHHHHHHHHHH------HHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEE
T ss_pred HHHHHHHHhccCeeeecccCchhhHHHHHHH------HHhhCcccccccccceeeeehhccHHHHHHHHHHhhccEEEEE
Confidence 467889999999776653 234555555544 1122222222234567888999999998888777778999996
Q ss_pred CCCCee-eehhh-------hhhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC-----H-H
Q 018935 140 LPDWQV-IPAEN-------IVASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED-----V-K 194 (348)
Q Consensus 140 ~~DW~i-IPlEN-------liA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d-----~-~ 194 (348)
--|--+ ||+|. ||......+.-+|.. ..+-.|+--...+..-|+|+|+|..+. | +
T Consensus 294 RGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPve 373 (526)
T 4drs_A 294 RGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFD 373 (526)
T ss_dssp CTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHH
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHH
Confidence 666433 55554 444433333345443 345578888999999999999998432 3 5
Q ss_pred HHHHHHHhhcc
Q 018935 195 AVLALKEYFDG 205 (348)
Q Consensus 195 ~v~~l~~~~~~ 205 (348)
.|+-+.+++.+
T Consensus 374 aV~~m~~I~~~ 384 (526)
T 4drs_A 374 AVNVMSRVCAQ 384 (526)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666666543
No 38
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=79.32 E-value=7.8 Score=29.17 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=47.1
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++....... ...+.+|++..-.. ..--.++..+.. ....++..... .+......+++.|+++++.+|-++
T Consensus 36 ~~~~~~~a~~~l~~-~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~l~kP~~~ 112 (137)
T 3hdg_A 36 SAGDGEEGERLFGL-HAPDVIITDIRMPK-LGGLEMLDRIKAGGAKPYVIVISAF-SEMKYFIKAIELGVHLFLPKPIEP 112 (137)
T ss_dssp EESSHHHHHHHHHH-HCCSEEEECSSCSS-SCHHHHHHHHHHTTCCCEEEECCCC-CCHHHHHHHHHHCCSEECCSSCCH
T ss_pred EECCHHHHHHHHhc-cCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCcEEEEecC-cChHHHHHHHhCCcceeEcCCCCH
Confidence 34565554333222 25677888543222 122233333332 23455555444 445567788999999999999999
Q ss_pred HHHHHHH
Q 018935 194 KAVLALK 200 (348)
Q Consensus 194 ~~v~~l~ 200 (348)
+++.+.-
T Consensus 113 ~~l~~~i 119 (137)
T 3hdg_A 113 GRLMETL 119 (137)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776543
No 39
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=79.03 E-value=5.2 Score=39.99 Aligned_cols=115 Identities=14% Similarity=0.103 Sum_probs=69.5
Q ss_pred EeCchhHHHHHHHhCCcEEEEcCcch------hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccc
Q 018935 56 WTESKQVMTAAVERGWNTFVFLSENQ------QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA 129 (348)
Q Consensus 56 w~~~K~~vT~ALEsG~~~~v~~~~~~------e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~ 129 (348)
+.+..+.+.+.+|.|+|.+++...+. +.++++.+. .| +.++ ....|.+.++...+..
T Consensus 254 ~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~---~~------------~~~v-i~g~v~t~e~a~~~~~- 316 (511)
T 3usb_A 254 TADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAK---YP------------SLNI-IAGNVATAEATKALIE- 316 (511)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH---CT------------TSEE-EEEEECSHHHHHHHHH-
T ss_pred ccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHh---CC------------CceE-EeeeeccHHHHHHHHH-
Confidence 55668889999999999999875442 222222211 00 1222 2236778877554443
Q ss_pred cCCCCeEEEeC-----------CCC---eeeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 130 DGQAENIVIDL-----------PDW---QVIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 130 ~~~~~~vvv~~-----------~DW---~iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
. .+|.+++.. .+| ++-.+.++.+.++..+..||+ -+.+.+|+..+ |+.|+|||++-+-
T Consensus 317 a-Gad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~ka---la~GA~~V~vGs~ 390 (511)
T 3usb_A 317 A-GANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKA---LAAGAHVVMLGSM 390 (511)
T ss_dssp H-TCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHH---HHTTCSEEEESTT
T ss_pred h-CCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHH---HHhCchhheecHH
Confidence 2 578888721 123 233334444444444567887 78899988766 5679999998764
No 40
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=78.89 E-value=6.7 Score=35.86 Aligned_cols=91 Identities=15% Similarity=0.106 Sum_probs=65.5
Q ss_pred eeEEEEEecChhhhhhhccccCCCCeEEEeCCCCeeee--------hhhhhhcccC-----CCceEEEEcCCHH---HHH
Q 018935 110 RVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIP--------AENIVASFQG-----SGKTVFAISKTPS---EAQ 173 (348)
Q Consensus 110 ~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIP--------lENliA~~q~-----~~~~l~a~v~~~~---eA~ 173 (348)
+...|+...+++.++.+.. ...|.++++..| .+.| .+|+.+.++. .+..++..++..+ ...
T Consensus 9 rs~L~~p~~~~~~~~~a~~--~gaD~vilDlEd-av~~~~~~k~~Ar~~v~~~l~~~~~~~~~~~~~VRv~~~~~~~~~~ 85 (284)
T 1sgj_A 9 RSVLFAPGNRADLIAKLPR--SAPDAVVIDLED-AVPGTAEAKAAARPVAHDAARDLIAAAPHLAVFVRVNALHSPYFED 85 (284)
T ss_dssp SEEEEEETTCHHHHHHTTT--TCCSEEEEESST-TSCSSHHHHHHHHHHHHHHHHHHHHHSTTSEEEEECCCTTSTTHHH
T ss_pred ceEEEccCCCHHHHHHHHh--CCCCEEEEECCC-CCCCchhhHHHHHHHHHHHHHhcccccCCCeEEEEeCCCCCHhHHH
Confidence 4567788888888777653 368999999888 4667 6788776643 3356888888644 233
Q ss_pred HHHHHhhcccCeEEEec-CCHHHHHHHHHhhc
Q 018935 174 IFLEALEQGLGGIVLKV-EDVKAVLALKEYFD 204 (348)
Q Consensus 174 ~al~~LE~G~DGVvl~~-~d~~~v~~l~~~~~ 204 (348)
-...+|+ |.|||+|+- ++++++.++.+++.
T Consensus 86 dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~ 116 (284)
T 1sgj_A 86 DLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQ 116 (284)
T ss_dssp HGGGCCT-TSSEEEECSCCSHHHHHHHHHHHH
T ss_pred HHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHH
Confidence 4456677 999999964 45899988888775
No 41
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=78.70 E-value=4.6 Score=40.22 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=70.5
Q ss_pred EeCchhHHHHHHHhCCcEEEEcCcch------hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccc
Q 018935 56 WTESKQVMTAAVERGWNTFVFLSENQ------QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA 129 (348)
Q Consensus 56 w~~~K~~vT~ALEsG~~~~v~~~~~~------e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~ 129 (348)
+.+..+.+...+|.|+|.+.+...+. +.++++.+- .| +.++.. ..+.+.++...+..
T Consensus 229 ~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~---~p------------~~~Vi~-g~v~t~e~a~~l~~- 291 (496)
T 4fxs_A 229 APGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA---YP------------HLEIIG-GNVATAEGARALIE- 291 (496)
T ss_dssp SSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH---CT------------TCCEEE-EEECSHHHHHHHHH-
T ss_pred ccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH---CC------------CceEEE-cccCcHHHHHHHHH-
Confidence 55678999999999999999875432 222222211 00 222222 45778877555443
Q ss_pred cCCCCeEEEeCC--------------CCeeeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 130 DGQAENIVIDLP--------------DWQVIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 130 ~~~~~~vvv~~~--------------DW~iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
..+|.+++... .++.-.+.++..++...+..||+ -+.+.+|+..++ +.|+|||++-+-
T Consensus 292 -aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kal---a~GAd~V~iGs~ 365 (496)
T 4fxs_A 292 -AGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAI---AAGASCVMVGSM 365 (496)
T ss_dssp -HTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH---HTTCSEEEESTT
T ss_pred -hCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHH---HcCCCeEEecHH
Confidence 26788887411 12222334455444444567888 689999987765 569999998765
No 42
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=78.57 E-value=18 Score=27.89 Aligned_cols=81 Identities=16% Similarity=0.194 Sum_probs=47.1
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-.... ....+.+|++..-.. ..--.++..+. .....++...... +......+++.|+++++.+|-++
T Consensus 51 ~~~~~~~al~~l~-~~~~dlii~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~Kp~~~ 127 (150)
T 4e7p_A 51 QAKNGQEAIQLLE-KESVDIAILDVEMPV-KTGLEVLEWIRSEKLETKVVVVTTFK-RAGYFERAVKAGVDAYVLKERSI 127 (150)
T ss_dssp EESSHHHHHHHHT-TSCCSEEEECSSCSS-SCHHHHHHHHHHTTCSCEEEEEESCC-CHHHHHHHHHTTCSEEEETTSCH
T ss_pred EECCHHHHHHHhh-ccCCCEEEEeCCCCC-CcHHHHHHHHHHhCCCCeEEEEeCCC-CHHHHHHHHHCCCcEEEecCCCH
Confidence 4456555333322 224677777543222 22223333332 2345666665544 44556778999999999999999
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++.+.
T Consensus 128 ~~l~~~ 133 (150)
T 4e7p_A 128 ADLMQT 133 (150)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 43
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=78.38 E-value=3.3 Score=39.38 Aligned_cols=42 Identities=10% Similarity=-0.101 Sum_probs=35.7
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~ 203 (348)
..+|..++.|.+||+.+ ++.|+|.|+|+.-+++++++..+.+
T Consensus 198 ~~~IeVEv~tl~ea~eA---l~aGaD~I~LDn~~~~~l~~av~~~ 239 (287)
T 3tqv_A 198 NKVVEVEVTNLDELNQA---IAAKADIVMLDNFSGEDIDIAVSIA 239 (287)
T ss_dssp TSCEEEEESSHHHHHHH---HHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CCcEEEEeCCHHHHHHH---HHcCCCEEEEcCCCHHHHHHHHHhh
Confidence 45899999999998765 5679999999999999998877765
No 44
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=78.28 E-value=0.51 Score=47.95 Aligned_cols=135 Identities=16% Similarity=0.197 Sum_probs=82.5
Q ss_pred CchhHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 018935 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v 136 (348)
.+++.+..|++.|+|.|++|. ++++.++++.++ +...|..+..+.+|.+++-++.+..-....|-+
T Consensus 194 ~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~-------------l~~~~~~i~IiakIEt~eav~nldeI~~~~DgI 260 (500)
T 1a3w_A 194 KDKEDLRFGVKNGVHMVFASFIRTANDVLTIREV-------------LGEQGKDVKIIVKIENQQGVNNFDEILKVTDGV 260 (500)
T ss_dssp HHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHH-------------HHHHHTTSEEEEEECSSHHHHSHHHHHHHSSEE
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-------------HHhcCCCcEEEEEECChHHHHhHHHHHHhCCEE
Confidence 468889999999999999986 345555554433 111233466788999988887765544446777
Q ss_pred EEeCCCCe-eeehhh-------hhhcccCCCceEEE---------EcCC--HHHHHHHHHHhhcccCeEEEecCC-----
Q 018935 137 VIDLPDWQ-VIPAEN-------IVASFQGSGKTVFA---------ISKT--PSEAQIFLEALEQGLGGIVLKVED----- 192 (348)
Q Consensus 137 vv~~~DW~-iIPlEN-------liA~~q~~~~~l~a---------~v~~--~~eA~~al~~LE~G~DGVvl~~~d----- 192 (348)
++-..|-- =||.|. +|.+....+.-++. ...+ -.|+--+..+...|+|.|+|..+.
T Consensus 261 mvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~y 340 (500)
T 1a3w_A 261 MVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNY 340 (500)
T ss_dssp EECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSC
T ss_pred EECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchh
Confidence 76322211 123333 34333222333442 2233 345667788889999999997774
Q ss_pred -HHHHHHHHHhhcc
Q 018935 193 -VKAVLALKEYFDG 205 (348)
Q Consensus 193 -~~~v~~l~~~~~~ 205 (348)
.+.|+-+.+++.+
T Consensus 341 PveaV~~m~~I~~~ 354 (500)
T 1a3w_A 341 PINAVTTMAETAVI 354 (500)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 2566666666643
No 45
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=78.21 E-value=10 Score=31.64 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=29.1
Q ss_pred ceeeeeeccCCCeEEEEcC-CCCeeEEeeeeEEeecc
Q 018935 290 KTCYLSELKSGKEVIVVDQ-KGRQRTAVVGRVKIESR 325 (348)
Q Consensus 290 kT~YLSEL~aG~eVLvVd~-~G~tR~~~VGRvKIE~R 325 (348)
+..+-++|+.||.|++.|. +|..|...|=++..+..
T Consensus 85 ~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~ 121 (145)
T 1at0_A 85 TFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRS 121 (145)
T ss_dssp EEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEE
T ss_pred EEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEE
Confidence 5678999999999999997 78788887777765433
No 46
>2imz_A Endonuclease PI-MTUI; N-terminal cysteine sulfinic acid C-terminal aminosuccinimide, hydrolase; 1.70A {Mycobacterium tuberculosis}
Probab=78.20 E-value=2.8 Score=35.00 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=43.9
Q ss_pred EEEe-cCCceeeeeeccC---CCeEEEEcCCCCeeEEeee-eEEeeccceeEEEEEECCEeeee
Q 018935 283 YVLV-PGGKTCYLSELKS---GKEVIVVDQKGRQRTAVVG-RVKIESRPLILVEAKVIKLFTAS 341 (348)
Q Consensus 283 Yv~~-pggkT~YLSEL~a---G~eVLvVd~~G~tR~~~VG-RvKIE~RPLlLIeAe~~G~~~~~ 341 (348)
-|.+ .+|++.-+.||.. |++|+.+|.+|+.....|= -.+...+|++-|+.+.+-.|.+.
T Consensus 7 ~V~~~~~G~~~~I~el~~~~~~~~V~~~d~~g~~~~~~v~~~~~~~~~~~~~i~t~~G~~i~~T 70 (168)
T 2imz_A 7 RIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFDQGTRDVIGLRIAGGAILWAT 70 (168)
T ss_dssp EEECTTTCCEEEHHHHHHTTCCCEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEETTSCEEEEC
T ss_pred EEEECCCCcEEEHHHhhCccCCCEEEEECCCCCEEEEEeeeEEEcCCceEEEEEeCCCCEEEEc
Confidence 4666 7888999999988 7899999999987644433 34456889998887655555554
No 47
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=77.92 E-value=8.6 Score=38.17 Aligned_cols=115 Identities=14% Similarity=0.154 Sum_probs=70.1
Q ss_pred EeCchhHHHHHHHhCCcEEEEcCcch------hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccc
Q 018935 56 WTESKQVMTAAVERGWNTFVFLSENQ------QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA 129 (348)
Q Consensus 56 w~~~K~~vT~ALEsG~~~~v~~~~~~------e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~ 129 (348)
+.+..+.+...+|.|+|.+.+...+. +.++++.+. .| +.++.. ..+.+.++...+..
T Consensus 227 ~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~---~p------------~~~Vi~-g~v~t~e~a~~l~~- 289 (490)
T 4avf_A 227 GADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT---FP------------DVQVIG-GNIATAEAAKALAE- 289 (490)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH---CT------------TSEEEE-EEECSHHHHHHHHH-
T ss_pred ccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH---CC------------CceEEE-eeeCcHHHHHHHHH-
Confidence 34568899999999999998864321 222222221 00 222222 35788887555443
Q ss_pred cCCCCeEEEeCC-----------CCe---eeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 130 DGQAENIVIDLP-----------DWQ---VIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 130 ~~~~~~vvv~~~-----------DW~---iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
..+|.+++-.. +|. +--+.++..++...+..||+ -+.+.+|+..++ +.|+|+|++-+-
T Consensus 290 -aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal---~~GAd~V~vGs~ 363 (490)
T 4avf_A 290 -AGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAM---VAGAYCVMMGSM 363 (490)
T ss_dssp -TTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHH---HHTCSEEEECTT
T ss_pred -cCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHH---HcCCCeeeecHH
Confidence 36888988322 222 22234445444444567888 689999988776 459999998765
No 48
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=77.77 E-value=3.2 Score=39.79 Aligned_cols=42 Identities=10% Similarity=0.074 Sum_probs=35.9
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~ 203 (348)
..+|..+|.|.+|++.++ +.|+|.|+|+.=+++++++..+.+
T Consensus 207 ~~kIeVEv~tl~e~~eAl---~aGaDiImLDn~s~~~l~~av~~~ 248 (300)
T 3l0g_A 207 NEYIAIECDNISQVEESL---SNNVDMILLDNMSISEIKKAVDIV 248 (300)
T ss_dssp SCCEEEEESSHHHHHHHH---HTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CCCEEEEECCHHHHHHHH---HcCCCEEEECCCCHHHHHHHHHhh
Confidence 468999999999988655 569999999999999998877765
No 49
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=77.72 E-value=13 Score=28.15 Aligned_cols=82 Identities=10% Similarity=0.102 Sum_probs=47.7
Q ss_pred EecChhhhhhhccc-cCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 116 EVSTPQELQQLQPA-DGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 116 ~v~~~ed~e~~~~~-~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
...+.++....... ....+.++++..-.. ..--.++..+. .....++..... .+......+++.|+++++.+|-+
T Consensus 32 ~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~-~~~~~~~~~~~~g~~~~l~kp~~ 109 (143)
T 3jte_A 32 TASSSTEGLRIFTENCNSIDVVITDMKMPK-LSGMDILREIKKITPHMAVIILTGH-GDLDNAILAMKEGAFEYLRKPVT 109 (143)
T ss_dssp EESSHHHHHHHHHHTTTTCCEEEEESCCSS-SCHHHHHHHHHHHCTTCEEEEEECT-TCHHHHHHHHHTTCSEEEESSCC
T ss_pred EeCCHHHHHHHHHhCCCCCCEEEEeCCCCC-CcHHHHHHHHHHhCCCCeEEEEECC-CCHHHHHHHHHhCcceeEeCCCC
Confidence 44555543333322 235678888554222 11222333332 234566655544 34556678899999999999999
Q ss_pred HHHHHHH
Q 018935 193 VKAVLAL 199 (348)
Q Consensus 193 ~~~v~~l 199 (348)
++++...
T Consensus 110 ~~~l~~~ 116 (143)
T 3jte_A 110 AQDLSIA 116 (143)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877654
No 50
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=75.95 E-value=4.7 Score=38.02 Aligned_cols=42 Identities=12% Similarity=0.070 Sum_probs=36.2
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 018935 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (348)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~~ 204 (348)
.+|..+|.|.+||+.+ ++.|+|.|+|++-+++++++..+.+.
T Consensus 194 ~~I~VEV~tleea~eA---~~aGaD~I~LDn~~~e~l~~av~~l~ 235 (285)
T 1o4u_A 194 TKIEVEVENLEDALRA---VEAGADIVMLDNLSPEEVKDISRRIK 235 (285)
T ss_dssp SCEEEEESSHHHHHHH---HHTTCSEEEEESCCHHHHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHhh
Confidence 5799999999998876 56799999999999999988777663
No 51
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=75.78 E-value=9.3 Score=32.14 Aligned_cols=112 Identities=21% Similarity=0.188 Sum_probs=60.1
Q ss_pred hHHHHHHHhCCcEEEEcCcc--hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 61 QVMTAAVERGWNTFVFLSEN--QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 61 ~~vT~ALEsG~~~~v~~~~~--~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
+.+..|++.|+|.+.++..+ .+.++++. .+.. ..+.+.++++...+. ....+++++
T Consensus 77 ~~~~~a~~~gad~v~l~~~~~~~~~~~~~~------------------~~~~--~~v~~~t~~e~~~~~--~~g~d~i~~ 134 (215)
T 1xi3_A 77 DRVDVALAVDADGVQLGPEDMPIEVAKEIA------------------PNLI--IGASVYSLEEALEAE--KKGADYLGA 134 (215)
T ss_dssp SCHHHHHHHTCSEEEECTTSCCHHHHHHHC------------------TTSE--EEEEESSHHHHHHHH--HHTCSEEEE
T ss_pred ChHHHHHHcCCCEEEECCccCCHHHHHHhC------------------CCCE--EEEecCCHHHHHHHH--hcCCCEEEE
Confidence 34567888899988886432 22333221 1222 223467777755432 225899988
Q ss_pred eCC------------CCeeeehhhhhhcccCCCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec-----CCH-HHHHH
Q 018935 139 DLP------------DWQVIPAENIVASFQGSGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV-----EDV-KAVLA 198 (348)
Q Consensus 139 ~~~------------DW~iIPlENliA~~q~~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~-----~d~-~~v~~ 198 (348)
..- +|..| ..+...+ +..+++. ++ +++++. +++.|+|||.+-+ +|+ +.+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~l--~~l~~~~---~~pvia~GGI~-~~nv~~---~~~~Ga~gv~vgs~i~~~~d~~~~~~~ 205 (215)
T 1xi3_A 135 GSVFPTKTKEDARVIGLEGL--RKIVESV---KIPVVAIGGIN-KDNARE---VLKTGVDGIAVISAVMGAEDVRKATEE 205 (215)
T ss_dssp ECSSCC----CCCCCHHHHH--HHHHHHC---SSCEEEESSCC-TTTHHH---HHTTTCSEEEESHHHHTSSSHHHHHHH
T ss_pred cCCccCCCCCCCCCcCHHHH--HHHHHhC---CCCEEEECCcC-HHHHHH---HHHcCCCEEEEhHHHhCCCCHHHHHHH
Confidence 431 23222 2222222 3345543 33 555554 4678999998764 466 35666
Q ss_pred HHHhh
Q 018935 199 LKEYF 203 (348)
Q Consensus 199 l~~~~ 203 (348)
+++.+
T Consensus 206 ~~~~~ 210 (215)
T 1xi3_A 206 LRKIV 210 (215)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 52
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=75.52 E-value=7.9 Score=38.03 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=64.4
Q ss_pred hhHHHHHHHhCCcEEEEcCc--c----hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCC
Q 018935 60 KQVMTAAVERGWNTFVFLSE--N----QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQA 133 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~--~----~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~ 133 (348)
.+.+.+++|.|+|.|+++.. + .+.++++.+- -+.++.. ..+.+.++.+.+.. ..+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~----------------~~i~Vi~-g~V~t~e~A~~a~~--aGA 206 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK----------------MNIDVIV-GNVVTEEATKELIE--NGA 206 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTT----------------CCCEEEE-EEECSHHHHHHHHH--TTC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhc----------------CCCeEEE-eecCCHHHHHHHHH--cCC
Confidence 78999999999999887432 1 1222222211 0222211 26788877555443 368
Q ss_pred CeEEEeC--------C---CCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 134 ENIVIDL--------P---DWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 134 ~~vvv~~--------~---DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
|.+++.. + +|. .| +.++...++..+..||+ -+.+.+++..+ |+.|+|||.+-+.
T Consensus 207 D~I~vG~g~Gs~~~tr~~~g~g-~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~ka---lalGAd~V~vGt~ 277 (400)
T 3ffs_A 207 DGIKVGIGPGSICTTRIVAGVG-VPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKA---LAVGASSVMIGSI 277 (400)
T ss_dssp SEEEECC---------CCSCBC-CCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHH---HTTTCSEEEECGG
T ss_pred CEEEEeCCCCcCcccccccccc-hhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHH---HHcCCCEEEEChH
Confidence 8888821 1 121 34 33444444444567888 57888887665 4679999998765
No 53
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=75.50 E-value=1.5 Score=44.85 Aligned_cols=135 Identities=19% Similarity=0.200 Sum_probs=85.7
Q ss_pred CchhHH-HHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCe
Q 018935 58 ESKQVM-TAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAEN 135 (348)
Q Consensus 58 ~~K~~v-T~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~ 135 (348)
.|++-+ ..|+|.|+|.|.++. .+++.+.++.++ +.+.|..+..+.+|.+++-++.+..-....|-
T Consensus 208 kD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~-------------l~~~~~~~~iiaKIE~~eav~nldeIl~~sDg 274 (511)
T 3gg8_A 208 KDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGL-------------LGPRGRHIRIIPKIENVEGLVNFDEILAEADG 274 (511)
T ss_dssp HHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHH-------------HTGGGTTCEEEEEECSHHHHHTHHHHHHHCSC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHH-------------HHhcCCCCeEEEEECCHHHHHhHHHHHHhCCe
Confidence 466667 999999999887764 234455544443 22334456788899999988776665555688
Q ss_pred EEEeCCCCe-eeehhhh-------hhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC----
Q 018935 136 IVIDLPDWQ-VIPAENI-------VASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED---- 192 (348)
Q Consensus 136 vvv~~~DW~-iIPlENl-------iA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d---- 192 (348)
++|-.-|-- =||+|.+ |.+....+.-+|.. ..+-.|+--...+.--|+|+|+|..+.
T Consensus 275 imVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~ 354 (511)
T 3gg8_A 275 IMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGE 354 (511)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS
T ss_pred EEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCC
Confidence 888433322 1466654 33332223334431 235578888899999999999996443
Q ss_pred --HHHHHHHHHhhcc
Q 018935 193 --VKAVLALKEYFDG 205 (348)
Q Consensus 193 --~~~v~~l~~~~~~ 205 (348)
.+.|+-+.+++.+
T Consensus 355 yPveaV~~M~~I~~~ 369 (511)
T 3gg8_A 355 FPVITVETMARICYE 369 (511)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 3566666666643
No 54
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=75.44 E-value=10 Score=33.73 Aligned_cols=109 Identities=17% Similarity=0.095 Sum_probs=61.4
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~ 139 (348)
.+++.++++.|++.+=++..+..-.+.+..+..- ++ +..++. ..+.+.++.+.+.. . .+++++.-
T Consensus 31 ~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~----------~~--~~~vga-gtvi~~d~~~~A~~-a-GAd~v~~p 95 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKE----------VP--EAIVGA-GTVLNPQQLAEVTE-A-GAQFAISP 95 (214)
T ss_dssp HHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHH----------CT--TSEEEE-ESCCSHHHHHHHHH-H-TCSCEEES
T ss_pred HHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHH----------Cc--CCEEee-CEEEEHHHHHHHHH-c-CCCEEEcC
Confidence 5689999999999888875432111111112110 00 112222 23566766554433 2 57888875
Q ss_pred CCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 140 LPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 140 ~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
..| .|+...-. ..+..++..+.|++|++. +++.|+|-|-+-|..
T Consensus 96 ~~d---~~v~~~~~---~~g~~~i~G~~t~~e~~~---A~~~Gad~v~~Fpa~ 139 (214)
T 1wbh_A 96 GLT---EPLLKAAT---EGTIPLIPGISTVSELML---GMDYGLKEFKFFPAE 139 (214)
T ss_dssp SCC---HHHHHHHH---HSSSCEEEEESSHHHHHH---HHHTTCCEEEETTTT
T ss_pred CCC---HHHHHHHH---HhCCCEEEecCCHHHHHH---HHHCCCCEEEEecCc
Confidence 433 23322222 233445556999999865 468999999888843
No 55
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=75.35 E-value=3.2 Score=38.33 Aligned_cols=114 Identities=9% Similarity=-0.021 Sum_probs=57.9
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEe-cChhhhhhhccccCCCCeEE-
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV-STPQELQQLQPADGQAENIV- 137 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v-~~~ed~e~~~~~~~~~~~vv- 137 (348)
.+.+..|.|.|+|+++++.-..+...++.... ++.|.....++.- ++.+.++.++.......|++
T Consensus 109 ~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~-------------~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs 175 (271)
T 1ujp_A 109 ERFFGLFKQAGATGVILPDLPPDEDPGLVRLA-------------QEIGLETVFLLAPTSTDARIATVVRHATGFVYAVS 175 (271)
T ss_dssp HHHHHHHHHHTCCEEECTTCCGGGCHHHHHHH-------------HHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEEC
T ss_pred HHHHHHHHHcCCCEEEecCCCHHHHHHHHHHH-------------HHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEe
Confidence 56678899999999998753222222221110 1111111111111 34555566665544444443
Q ss_pred ---EeCCCCe-eeehhhhhhcccCC-CceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 138 ---IDLPDWQ-VIPAENIVASFQGS-GKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 138 ---v~~~DW~-iIPlENliA~~q~~-~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
+.+.+-. --|++.+++++.+. +..|++ .++++++|+.+ .|+|||++-+.
T Consensus 176 ~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~-----~~ADgVIVGSA 231 (271)
T 1ujp_A 176 VTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA-----AVADGVVVGSA 231 (271)
T ss_dssp C------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH-----TTSSEEEECHH
T ss_pred cCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh-----cCCCEEEEChH
Confidence 2222211 23556677665543 334544 36788888873 89999998764
No 56
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=74.76 E-value=15 Score=33.55 Aligned_cols=111 Identities=19% Similarity=0.094 Sum_probs=70.4
Q ss_pred CchhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 018935 58 ESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vv 137 (348)
+-.++..+.++.|++.+=++-.+..-.+.+..+..--| +..+|+ ..|.+.++.+.+... .+++++
T Consensus 26 ~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p------------~~~IGA-GTVlt~~~a~~ai~A--GA~fiv 90 (217)
T 3lab_A 26 HAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVP------------EAIVGA-GTVCTADDFQKAIDA--GAQFIV 90 (217)
T ss_dssp GHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT------------TSEEEE-ECCCSHHHHHHHHHH--TCSEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCC------------CCeEee-ccccCHHHHHHHHHc--CCCEEE
Confidence 35778899999999998887432211122222211001 122333 467888886665542 578888
Q ss_pred EeCCCCeeeehhhhhhcccCCCc------eEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 138 IDLPDWQVIPAENIVASFQGSGK------TVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 138 v~~~DW~iIPlENliA~~q~~~~------~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
--..+.++| ...+..+. -++.-+.+++|+..+ +|.|+|.|=+-|.+
T Consensus 91 sP~~~~evi------~~~~~~~v~~~~~~~~~PG~~TptE~~~A---~~~Gad~vK~FPa~ 142 (217)
T 3lab_A 91 SPGLTPELI------EKAKQVKLDGQWQGVFLPGVATASEVMIA---AQAGITQLKCFPAS 142 (217)
T ss_dssp ESSCCHHHH------HHHHHHHHHCSCCCEEEEEECSHHHHHHH---HHTTCCEEEETTTT
T ss_pred eCCCcHHHH------HHHHHcCCCccCCCeEeCCCCCHHHHHHH---HHcCCCEEEECccc
Confidence 765554444 33333344 799999999998765 89999999998876
No 57
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=74.63 E-value=1.7 Score=44.57 Aligned_cols=135 Identities=16% Similarity=0.175 Sum_probs=85.9
Q ss_pred CchhHH-HHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCe
Q 018935 58 ESKQVM-TAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAEN 135 (348)
Q Consensus 58 ~~K~~v-T~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~ 135 (348)
.|++-+ .-|+|.|+|.|.++. .+++.+.++.++ +.+.|+.+..+.+|.+++-++.+..-....|-
T Consensus 217 kD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~-------------l~~~g~~i~IIAKIE~~eav~nldeIl~~sDG 283 (520)
T 3khd_A 217 KDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNL-------------LGPRGRHIKIIPKIENIEGIIHFDKILAESDG 283 (520)
T ss_dssp HHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHH-------------HTTTTTTSEEEEEECSHHHHHTHHHHHHHSSC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-------------HHhcCCCCcEEEEECCHHHHHhHHHHHHhCCc
Confidence 466666 999999999887764 234455544443 33345567788899999988876665555677
Q ss_pred EEEeCCCCe-eeehhhhh-------hcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC----
Q 018935 136 IVIDLPDWQ-VIPAENIV-------ASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED---- 192 (348)
Q Consensus 136 vvv~~~DW~-iIPlENli-------A~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d---- 192 (348)
++|-.-|-- =||+|.+- .+....+.-++.. ..+-.|+--...+.--|+|+|+|..+.
T Consensus 284 IMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~ 363 (520)
T 3khd_A 284 IMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGK 363 (520)
T ss_dssp EEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCS
T ss_pred EEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCc
Confidence 887332321 14666643 2222222234421 235678888899999999999996443
Q ss_pred --HHHHHHHHHhhcc
Q 018935 193 --VKAVLALKEYFDG 205 (348)
Q Consensus 193 --~~~v~~l~~~~~~ 205 (348)
.+.|+-+.+++.+
T Consensus 364 yPveaV~~M~~I~~~ 378 (520)
T 3khd_A 364 FPVEAVTIMSKICLE 378 (520)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 3666666666643
No 58
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=74.26 E-value=2.2 Score=40.09 Aligned_cols=69 Identities=14% Similarity=0.041 Sum_probs=32.7
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhccc-------c-cccceeeeeEEEEEEEEEcCCcce
Q 018935 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFDGR-------N-EVSNLLSLMKATVTRVDVAGMGDR 231 (348)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~~~~-------~-~~~~~l~L~~atVt~V~~vGmGdR 231 (348)
.+++.++.+++|++.++ +.|+|+|.|++-++++++++.+.+... + ..++.+ ...+|.++...|. |+
T Consensus 200 ~~i~vev~tlee~~~A~---~aGaD~I~ld~~~~~~l~~~v~~l~~~~~g~~~v~I~ASGGI--t~~ni~~~~~~Gv-D~ 273 (294)
T 3c2e_A 200 VKIEVECLSEDEATEAI---EAGADVIMLDNFKGDGLKMCAQSLKNKWNGKKHFLLECSGGL--NLDNLEEYLCDDI-DI 273 (294)
T ss_dssp SCEEEECSSSHHHHHHH---HHTCSEEECCC---------------------CCEEEEECCC--CC------CCCSC-SE
T ss_pred CeEEEecCCHHHHHHHH---HcCCCEEEECCCCHHHHHHHHHHhcccccCCCCeEEEEECCC--CHHHHHHHHHcCC-CE
Confidence 57999999999987665 579999999999999888776655321 0 122333 4456666666665 55
Q ss_pred EEE
Q 018935 232 VCV 234 (348)
Q Consensus 232 VCV 234 (348)
+.|
T Consensus 274 i~v 276 (294)
T 3c2e_A 274 YST 276 (294)
T ss_dssp EEC
T ss_pred EEE
Confidence 444
No 59
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=74.20 E-value=4.3 Score=38.33 Aligned_cols=40 Identities=15% Similarity=0.016 Sum_probs=35.4
Q ss_pred eEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 018935 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (348)
Q Consensus 161 ~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~ 203 (348)
+|+.++.+++|++.+ ++.|+|+|.|++-++++++++.+.+
T Consensus 210 kI~vev~tlee~~eA---~~aGaD~I~ld~~~~e~l~~~v~~~ 249 (296)
T 1qap_A 210 PVEVEVENLDELDDA---LKAGADIIMLDNFNTDQMREAVKRV 249 (296)
T ss_dssp CEEEEESSHHHHHHH---HHTTCSEEEESSCCHHHHHHHHHTT
T ss_pred cEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHh
Confidence 899999999998776 5779999999999999998887765
No 60
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=74.15 E-value=15 Score=27.66 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=42.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-+++++.+.
T Consensus 59 ~~dlii~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~kP~~~~~L~~~ 128 (143)
T 2qvg_A 59 HPKLILLDINIPK-MNGIEFLKELRDDSSFTDIEVFVLTAAY-TSKDKLAFESLNIRGHLIKPLDYGEAIKL 128 (143)
T ss_dssp CCSEEEEETTCTT-SCHHHHHHHHTTSGGGTTCEEEEEESCC-CHHHHHHHTTTTCCEEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHcCccccCCcEEEEeCCC-CHHHHHHHHhcCCCeEEECCCCHHHHHHH
Confidence 4677777654222 222244444443 245666665543 35567788999999999999999987654
No 61
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=74.12 E-value=25 Score=26.35 Aligned_cols=67 Identities=9% Similarity=0.111 Sum_probs=44.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.+|++..-.. ..--.++..+.. ....++......++......+++.|+++++.+|-+++++...
T Consensus 50 ~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 120 (140)
T 3grc_A 50 PYAAMTVDLNLPD-QDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILS 120 (140)
T ss_dssp CCSEEEECSCCSS-SCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHH
Confidence 4566776433111 222234444332 356788888877777666689999999999999999877653
No 62
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=74.09 E-value=3.4 Score=39.51 Aligned_cols=42 Identities=12% Similarity=0.027 Sum_probs=34.5
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~ 203 (348)
..+|..+|.|.+|++.+ ++.|+|+|+|+.-+++++++..+.+
T Consensus 209 ~~~ieVEvdtlde~~eA---l~aGaD~I~LDn~~~~~l~~av~~i 250 (298)
T 3gnn_A 209 EVPVQIEVETLDQLRTA---LAHGARSVLLDNFTLDMMRDAVRVT 250 (298)
T ss_dssp -CCCEEEESSHHHHHHH---HHTTCEEEEEESCCHHHHHHHHHHH
T ss_pred CCCEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHh
Confidence 35789999999987665 5579999999999999988776654
No 63
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=73.97 E-value=13 Score=32.33 Aligned_cols=134 Identities=15% Similarity=0.031 Sum_probs=63.7
Q ss_pred EEEEEe--CchhHHHHHHHhCCcEEEEcCc---chhhhhhcccee--eeeeeeecCCccccCCCCeeEEEEEecChhhhh
Q 018935 52 RVWIWT--ESKQVMTAAVERGWNTFVFLSE---NQQLAIDWSTIA--LLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQ 124 (348)
Q Consensus 52 ~vWiw~--~~K~~vT~ALEsG~~~~v~~~~---~~e~~~~l~~i~--~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e 124 (348)
.+++-. .+.+.+..+++.|+|.+++... +.+..+++..++ .+-.+...+|...- .|-.-. .-.+.+++.
T Consensus 75 pvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~g~~i~~~~d~~~~~v~~-~g~~~~---~~~~~~e~~ 150 (241)
T 1qo2_A 75 HIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSLREIDVEPVFSLDTRGGRVAF-KGWLAE---EEIDPVSLL 150 (241)
T ss_dssp GEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHHHTTTCEEEEEEEEETTEECC-TTCSSC---SCCCHHHHH
T ss_pred cEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChHHHHHHHHcCCcEEEEEEecCCEEEE-CCceec---CCCCHHHHH
Confidence 366643 4567788899999999998753 223333332221 11111112221111 110000 001333322
Q ss_pred hhccccCCCCeEEEeCCCC----eeeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHh--hcc-cCeEEEec
Q 018935 125 QLQPADGQAENIVIDLPDW----QVIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEAL--EQG-LGGIVLKV 190 (348)
Q Consensus 125 ~~~~~~~~~~~vvv~~~DW----~iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~L--E~G-~DGVvl~~ 190 (348)
..+.. ...+.+++...+- +-+.+|.+-.-.+..+..+++ -++++++++.+++.- -.| +|||++-.
T Consensus 151 ~~~~~-~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 151 KRLKE-YGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGR 224 (241)
T ss_dssp HHHHT-TTCCEEEEEETTHHHHTCCCCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECH
T ss_pred HHHHh-CCCCEEEEEeecccccCCcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeH
Confidence 22222 2567777765321 112344332221222445666 478888888776540 119 99999864
No 64
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=73.42 E-value=8.1 Score=35.69 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=35.7
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 018935 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (348)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~~ 204 (348)
.++..++.+++|++.++ +.|+|+|.+.+-++++++++.+.+.
T Consensus 183 ~~i~vev~tlee~~~A~---~aGaD~I~ld~~~~~~l~~~v~~l~ 224 (273)
T 2b7n_A 183 AKIEIECESFEEAKNAM---NAGADIVMCDNLSVLETKEIAAYRD 224 (273)
T ss_dssp CCEEEEESSHHHHHHHH---HHTCSEEEEETCCHHHHHHHHHHHH
T ss_pred ceEEEEcCCHHHHHHHH---HcCCCEEEECCCCHHHHHHHHHHhh
Confidence 47999999999987665 5799999999999999988777653
No 65
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=73.28 E-value=15 Score=33.94 Aligned_cols=107 Identities=12% Similarity=0.094 Sum_probs=61.4
Q ss_pred hhHHHHHHHhCCcEEEEcCcc-hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~-~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
.+.+..++|.|+|.+.+.-++ .+..+.+.+ .|.++ +..+.+.++...+. ...+|.+++
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~l~~-----------------~gi~v--i~~v~t~~~a~~~~--~~GaD~i~v 144 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAEFRR-----------------HGVKV--IHKCTAVRHALKAE--RLGVDAVSI 144 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHHHHH-----------------TTCEE--EEEESSHHHHHHHH--HTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHHHHH-----------------cCCCE--EeeCCCHHHHHHHH--HcCCCEEEE
Confidence 578999999999998876432 223322221 13332 24567777644332 235789998
Q ss_pred eCCC------CeeeehhhhhhcccCC-CceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 018935 139 DLPD------WQVIPAENIVASFQGS-GKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 139 ~~~D------W~iIPlENliA~~q~~-~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
.... ...+|.-.++.++... +..|++. +.+.+++..++ +.|+|||.+-+
T Consensus 145 ~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al---~~GAdgV~vGs 202 (328)
T 2gjl_A 145 DGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAAL---ALGADAINMGT 202 (328)
T ss_dssp ECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHH---HHTCSEEEESH
T ss_pred ECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH---HcCCCEEEECH
Confidence 6531 1123444555554322 3345543 56666665554 46999999864
No 66
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=73.27 E-value=1.8 Score=45.09 Aligned_cols=135 Identities=13% Similarity=0.199 Sum_probs=87.0
Q ss_pred CchhHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 018935 58 ESKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v 136 (348)
.|++.+.-|+|.|+|.|.++. .+++.++++.++ +.+.|..+..+.+|.+++-++.+..-....|-+
T Consensus 194 kD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~-------------l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGI 260 (606)
T 3t05_A 194 KDAEDIRFGIKENVDFIAASFVRRPSDVLEIREI-------------LEEQKANISVFPKIENQEGIDNIEEILEVSDGL 260 (606)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH-------------HHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCE
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-------------HHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEE
Confidence 578889999999999877663 234455544443 333345677888999999887766655557888
Q ss_pred EEeCCCCe-eeehhhh-------hhcccCCCceEEEE-----------cCCHHHHHHHHHHhhcccCeEEEecCC-----
Q 018935 137 VIDLPDWQ-VIPAENI-------VASFQGSGKTVFAI-----------SKTPSEAQIFLEALEQGLGGIVLKVED----- 192 (348)
Q Consensus 137 vv~~~DW~-iIPlENl-------iA~~q~~~~~l~a~-----------v~~~~eA~~al~~LE~G~DGVvl~~~d----- 192 (348)
+|-.-|-- =||+|++ |.+....+.-++.. ..+-.|+--...+.--|+|+|+|..+.
T Consensus 261 mVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~y 340 (606)
T 3t05_A 261 MVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLY 340 (606)
T ss_dssp EEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCSC
T ss_pred EEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCCC
Confidence 88433322 2455554 33322222334431 234578888899999999999998432
Q ss_pred -HHHHHHHHHhhcc
Q 018935 193 -VKAVLALKEYFDG 205 (348)
Q Consensus 193 -~~~v~~l~~~~~~ 205 (348)
.+.|+-+.+++.+
T Consensus 341 PveaV~~m~~I~~~ 354 (606)
T 3t05_A 341 PEEAVKTMRNIAVS 354 (606)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 3667666666643
No 67
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=73.06 E-value=2.7 Score=40.33 Aligned_cols=140 Identities=14% Similarity=0.223 Sum_probs=82.0
Q ss_pred cEEEEEeC--chhHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecC--------C-----------ccccCCC
Q 018935 51 KRVWIWTE--SKQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKE--------G-----------EVYDSGD 108 (348)
Q Consensus 51 K~vWiw~~--~K~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~--------g-----------~~~~~~g 108 (348)
+.+||-.- +...+..+|+.|+++|++|. ++.+.++++.+..+..|+-..+ | +.+...+
T Consensus 96 ~~~~VRv~~~~~~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~ 175 (339)
T 1izc_A 96 SLVIVRVPKHDEVSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSN 175 (339)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHH
T ss_pred CeEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcC
Confidence 56888652 46788999999999999986 3455555554442222211110 0 0000002
Q ss_pred CeeEEEEEecChhhhhhhccccC--CCCeEEEeCCCCee------------------e-ehhhhhhcccCCCceEEEEcC
Q 018935 109 RRVGSIIEVSTPQELQQLQPADG--QAENIVIDLPDWQV------------------I-PAENIVASFQGSGKTVFAISK 167 (348)
Q Consensus 109 k~v~~~~~v~~~ed~e~~~~~~~--~~~~vvv~~~DW~i------------------I-PlENliA~~q~~~~~l~a~v~ 167 (348)
..+.+++.|.+++-++.+..... ..+.+.+-..|-.. . -++.++.+....+..+.....
T Consensus 176 ~~i~vi~mIEt~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~~ 255 (339)
T 1izc_A 176 NHVCIIPQIESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGAL 255 (339)
T ss_dssp HHCEEEEEECSHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCceEEEEEChHHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEecC
Confidence 34567888999887777554433 47777763322211 1 123444444444445666778
Q ss_pred CHHHHHHHHHHhhcccCeEEEecCCHH
Q 018935 168 TPSEAQIFLEALEQGLGGIVLKVEDVK 194 (348)
Q Consensus 168 ~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (348)
|+++++. .++.|.+++++.+ |..
T Consensus 256 d~~~a~~---~~~~Gf~~l~~~~-di~ 278 (339)
T 1izc_A 256 SVDMVPS---LIEQGYRAIAVQF-DVW 278 (339)
T ss_dssp SGGGHHH---HHHTTEEEEEEEE-HHH
T ss_pred CHHHHHH---HHHhCCCEEEecH-HHH
Confidence 8877765 5689999988877 443
No 68
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=73.02 E-value=9.6 Score=34.89 Aligned_cols=108 Identities=16% Similarity=0.098 Sum_probs=68.0
Q ss_pred chhHHHHHHHhCCcEEEEcCcch---hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCe
Q 018935 59 SKQVMTAAVERGWNTFVFLSENQ---QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAEN 135 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~~---e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~ 135 (348)
-.+++.++++.|++.+=++-.+. +..+++.+- + | +-.++ ...|.+.++.+.+... .+++
T Consensus 48 a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~--~-~------------~~~iG-aGTVlt~~~a~~Ai~A--GA~f 109 (232)
T 4e38_A 48 IIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQA--Q-P------------EMLIG-AGTILNGEQALAAKEA--GATF 109 (232)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHH--C-T------------TCEEE-EECCCSHHHHHHHHHH--TCSE
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHh--C-C------------CCEEe-ECCcCCHHHHHHHHHc--CCCE
Confidence 46778889999999887764322 233322221 0 1 11222 2346788886665432 5778
Q ss_pred EEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 136 vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
++.-..| +.++...+..+..++.-+.|++|+..+ ++.|+|-|=+-|.+.
T Consensus 110 IvsP~~~------~~vi~~~~~~gi~~ipGv~TptEi~~A---~~~Gad~vK~FPa~~ 158 (232)
T 4e38_A 110 VVSPGFN------PNTVRACQEIGIDIVPGVNNPSTVEAA---LEMGLTTLKFFPAEA 158 (232)
T ss_dssp EECSSCC------HHHHHHHHHHTCEEECEECSHHHHHHH---HHTTCCEEEECSTTT
T ss_pred EEeCCCC------HHHHHHHHHcCCCEEcCCCCHHHHHHH---HHcCCCEEEECcCcc
Confidence 8764433 334444444566788899999998776 789999999988654
No 69
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=72.80 E-value=11 Score=34.25 Aligned_cols=82 Identities=20% Similarity=0.098 Sum_probs=50.0
Q ss_pred Chhhhhhhcccc--CCCCeEEEeCCCCeeeehhh---hhhcccCCCceEEEEcC--CHHHHHHHH-HHhhcccCeEEE--
Q 018935 119 TPQELQQLQPAD--GQAENIVIDLPDWQVIPAEN---IVASFQGSGKTVFAISK--TPSEAQIFL-EALEQGLGGIVL-- 188 (348)
Q Consensus 119 ~~ed~e~~~~~~--~~~~~vvv~~~DW~iIPlEN---liA~~q~~~~~l~a~v~--~~~eA~~al-~~LE~G~DGVvl-- 188 (348)
+++...+++... ..+||+-+.+. ..+|. +.+.....+...+.-++ +.+++...+ .+++.|++|+..
T Consensus 157 s~~~i~~a~~~a~~~GAD~vkt~~~----~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvgr 232 (263)
T 1w8s_A 157 APEIVAYAARIALELGADAMKIKYT----GDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGR 232 (263)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECC----SSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCC----CCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEeh
Confidence 566655543322 26899998753 13344 33333222556666677 888887555 688999999965
Q ss_pred ---ecCCH-HHHHHHHHhhc
Q 018935 189 ---KVEDV-KAVLALKEYFD 204 (348)
Q Consensus 189 ---~~~d~-~~v~~l~~~~~ 204 (348)
..+|| ..+++|++++.
T Consensus 233 aI~~~~dp~~~~~~l~~~v~ 252 (263)
T 1w8s_A 233 NVWQRRDALKFARALAELVY 252 (263)
T ss_dssp HHHTSTTHHHHHHHHHHHHC
T ss_pred hhcCCcCHHHHHHHHHHHHh
Confidence 55676 44555565553
No 70
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=72.13 E-value=9.1 Score=34.82 Aligned_cols=103 Identities=11% Similarity=0.075 Sum_probs=61.6
Q ss_pred hhHHHHHHHhCCcEEEEcCcch------------h---hhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhh
Q 018935 60 KQVMTAAVERGWNTFVFLSENQ------------Q---LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQ 124 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~------------e---~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e 124 (348)
.+.+..|++.|++.|.+...+. + +++++..+.. ..| +.+.|.+.-++
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~-------------~~~----~~liInd~~~l- 107 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAH-------------RYG----ALFAVNDRADI- 107 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHH-------------HTT----CEEEEESCHHH-
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHH-------------hhC----CEEEEeCHHHH-
Confidence 5788999999999999875431 1 2222322211 112 22345555543
Q ss_pred hhccccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 125 QLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 125 ~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
+... .++-|-+...|. |.+.+-.. .+....|-..+.|.+|++.+ .+.|+|-|.+.|
T Consensus 108 --A~~~-gAdGVHLg~~dl---~~~~~r~~-~~~~~~iG~S~ht~~Ea~~A---~~~GaDyI~vgp 163 (243)
T 3o63_A 108 --ARAA-GADVLHLGQRDL---PVNVARQI-LAPDTLIGRSTHDPDQVAAA---AAGDADYFCVGP 163 (243)
T ss_dssp --HHHH-TCSEEEECTTSS---CHHHHHHH-SCTTCEEEEEECSHHHHHHH---HHSSCSEEEECC
T ss_pred --HHHh-CCCEEEecCCcC---CHHHHHHh-hCCCCEEEEeCCCHHHHHHH---hhCCCCEEEEcC
Confidence 2222 456777755554 55444332 23345677788999997754 568999999954
No 71
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=72.08 E-value=13 Score=32.24 Aligned_cols=81 Identities=12% Similarity=0.120 Sum_probs=46.1
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (348)
...+.++.-.... ....|.+|++..-+..=-+ .++..+.. ....|+..... .+......+++.|++|.+.+|-+++
T Consensus 66 ~~~~~~~al~~~~-~~~~DlvllD~~lp~~~G~-~l~~~lr~~~~~~iI~lt~~-~~~~~~~~a~~~Ga~~yl~Kp~~~~ 142 (249)
T 3q9s_A 66 HADSAMNGLIKAR-EDHPDLILLDLGLPDFDGG-DVVQRLRKNSALPIIVLTAR-DTVEEKVRLLGLGADDYLIKPFHPD 142 (249)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEEECCSCHHHHH-HHHHHHHTTCCCCEEEEESC-CSHHHHHHHHHHTCSEEEESSCCHH
T ss_pred EeCCHHHHHHHHh-cCCCCEEEEcCCCCCCCHH-HHHHHHHcCCCCCEEEEECC-CCHHHHHHHHHCCCcEEEECCCCHH
Confidence 4456554333222 2256888885442221111 23333322 23455555443 3455677889999999999999998
Q ss_pred HHHHH
Q 018935 195 AVLAL 199 (348)
Q Consensus 195 ~v~~l 199 (348)
++.+.
T Consensus 143 ~L~~~ 147 (249)
T 3q9s_A 143 ELLAR 147 (249)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 72
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=71.79 E-value=18 Score=26.66 Aligned_cols=66 Identities=9% Similarity=0.185 Sum_probs=39.7
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+.. ....++......+ ......+++.|+++++.+|-+++++.+.
T Consensus 55 ~~dlvi~d~~~~~-~~g~~~~~~l~~~~~~~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 124 (140)
T 1k68_A 55 RPDLILLXLNLPK-KDGREVLAEIKSDPTLKRIPVVVLSTSIN-EDDIFHSYDLHVNCYITKSANLSQLFQI 124 (140)
T ss_dssp CCSEEEECSSCSS-SCHHHHHHHHHHSTTGGGSCEEEEESCCC-HHHHHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCcEEEEecCCCc-ccHHHHHHHHHcCcccccccEEEEecCCc-HHHHHHHHHhchhheecCCCCHHHHHHH
Confidence 4677777433221 222234444332 2345666555443 3455678899999999999999887653
No 73
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=71.43 E-value=5.6 Score=36.52 Aligned_cols=58 Identities=10% Similarity=0.283 Sum_probs=37.6
Q ss_pred CCCCCeeeec----CCceeEEEe-------------cCC-ceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEee----cc
Q 018935 268 IASRPFRVNA----GPVHAYVLV-------------PGG-KTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIE----SR 325 (348)
Q Consensus 268 va~RPFRVNA----GaVHaYv~~-------------pgg-kT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE----~R 325 (348)
.-.|||-+-- +.++=+|.. |+| -|+||+.|+.||+|.+-...|+.. ..-+ .+
T Consensus 98 ~~~R~ySIaS~p~~~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~gP~G~f~------l~~~~~~~~~ 171 (316)
T 3jqq_A 98 RCARLYSISSSNNMENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKINDDIYLTGAHGYFN------LPNDAIQKNT 171 (316)
T ss_dssp CCCEEEEBCSCTTSSSEEEEEECCBC---------CCBCHHHHHHHTCCTTCEEEEEEEECCCC------CCTTHHHHTC
T ss_pred ccceeeecccCCCCCeEEEEEEEEEecccccccCcCCCCchhHHHhhCCCCCEEEEEecCCceE------cCCcccCCCC
Confidence 3456666533 445555654 334 588999999999999876666531 1112 58
Q ss_pred ceeEEE
Q 018935 326 PLILVE 331 (348)
Q Consensus 326 PLlLIe 331 (348)
|++||=
T Consensus 172 ~vvlIA 177 (316)
T 3jqq_A 172 NFIFIA 177 (316)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 899884
No 74
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=71.08 E-value=13 Score=27.73 Aligned_cols=66 Identities=14% Similarity=0.226 Sum_probs=38.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+-++++..-.. ..--.++..+. .....++...... +......+++.|+++++.+|-+++++.+.
T Consensus 46 ~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 113 (134)
T 3f6c_A 46 KPDIVIIDVDIPG-VNGIQVLETLRKRQYSGIIIIVSAKN-DHFYGKHCADAGANGFVSKKEGMNNIIAA 113 (134)
T ss_dssp CCSEEEEETTCSS-SCHHHHHHHHHHTTCCSEEEEEECC----CTHHHHHHTTCSEEEEGGGCTHHHHHH
T ss_pred CCCEEEEecCCCC-CChHHHHHHHHhcCCCCeEEEEeCCC-ChHHHHHHHHhCCCEEEeCCCCHHHHHHH
Confidence 4677888554222 12222333332 2244566555444 44456788899999999999998877654
No 75
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=70.87 E-value=22 Score=27.36 Aligned_cols=82 Identities=10% Similarity=0.097 Sum_probs=46.2
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcc-cCeEEEecCC
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQG-LGGIVLKVED 192 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G-~DGVvl~~~d 192 (348)
...+.++.-.........+.++++..-...=.+ .++..+. .....++... +..+......+++.| +++++.+|-+
T Consensus 32 ~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~-~~~~~l~~~~~~~~ii~~s-~~~~~~~~~~~~~~g~~~~~l~KP~~ 109 (151)
T 3kcn_A 32 TCESGPEALACIKKSDPFSVIMVDMRMPGMEGT-EVIQKARLISPNSVYLMLT-GNQDLTTAMEAVNEGQVFRFLNKPCQ 109 (151)
T ss_dssp EESSHHHHHHHHHHSCCCSEEEEESCCSSSCHH-HHHHHHHHHCSSCEEEEEE-CGGGHHHHHHHHHHTCCSEEEESSCC
T ss_pred EeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHH-HHHHHHHhcCCCcEEEEEE-CCCCHHHHHHHHHcCCeeEEEcCCCC
Confidence 345555433333222234778885542221111 2232222 2344555544 445566778899999 9999999999
Q ss_pred HHHHHHH
Q 018935 193 VKAVLAL 199 (348)
Q Consensus 193 ~~~v~~l 199 (348)
++++.+.
T Consensus 110 ~~~L~~~ 116 (151)
T 3kcn_A 110 MSDIKAA 116 (151)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877654
No 76
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=70.87 E-value=6.9 Score=33.50 Aligned_cols=101 Identities=18% Similarity=0.186 Sum_probs=57.6
Q ss_pred eeEEEEEEEEEcCCc-ceEEEeecC-----CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cCCceeEE
Q 018935 215 LMKATVTRVDVAGMG-DRVCVDLCS-----LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AGPVHAYV 284 (348)
Q Consensus 215 L~~atVt~V~~vGmG-dRVCVDtcs-----ll~~GEGmLVGS~S~glFLVhsEt~es~Yva~RPFRVN----AGaVHaYv 284 (348)
..+++|++++.+.-. -|+.+.... -+.||+=+.+ +-.....++...|||=+- .|.+.=.+
T Consensus 3 ~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l----------~~~~~~~~~~~~R~ySi~s~~~~~~~~i~v 72 (243)
T 4eh1_A 3 GRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGI----------EVTPEGSDYREIRQYSLSHASNGREYRISV 72 (243)
T ss_dssp CEEEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEE----------EECCSSCSSCEEEEEEBCSCCCSSCEEEEE
T ss_pred cEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCcCCCCEEEE----------EEecCCCccccceeeEeccCCCCCeEEEEE
Confidence 357888888887532 234444322 2445553332 111111122234555552 24455555
Q ss_pred Eec-------CCceeeee-eccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEE
Q 018935 285 LVP-------GGKTCYLS-ELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 285 ~~p-------ggkT~YLS-EL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
..- |.-|+||. .|+.||+|.+-...|+...- -..+|++||=
T Consensus 73 k~~~~~~~~~G~~S~~l~~~l~~G~~v~v~gP~G~~~~~------~~~~~~vlia 121 (243)
T 4eh1_A 73 KREGVGSDNPGLVSHYLHNNVKVGDSVKLYAPAGDFFYV------ERERPVVLIS 121 (243)
T ss_dssp ECTTTTSSSCCHHHHHHHHHCCTTCEEEEEEEECSCCCC------CCSSCEEEEE
T ss_pred EEeecCCCCCCeehhHHHhcCCCCCEEEEEccCcccCcC------CCCCCEEEEE
Confidence 543 44599996 69999999999888875421 2467888874
No 77
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=70.84 E-value=13 Score=35.86 Aligned_cols=115 Identities=13% Similarity=0.122 Sum_probs=65.4
Q ss_pred CchhHHHHHHHhCCcEEEEcCc--c-hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 018935 58 ESKQVMTAAVERGWNTFVFLSE--N-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~--~-~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~ 134 (348)
+..+.+..++|.|+|.|+++.. + ....+.+..+....| +.++ ....+.++++...+.. ..+|
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p------------~v~V-i~G~v~t~e~A~~a~~--aGAD 172 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYP------------HLEI-IGGNVATAEGARALIE--AGVS 172 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCT------------TCEE-EEEEECSHHHHHHHHH--HTCS
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcC------------CCce-EeeeeCCHHHHHHHHH--cCCC
Confidence 4578899999999999887432 1 112121222211000 2221 1236788887665543 2689
Q ss_pred eEEEe---C--------CCCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 135 NIVID---L--------PDWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 135 ~vvv~---~--------~DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
++++- + .+|- +| +.++.+.+...+..||+ -+.+..++.. +|..|+|||.+-+.
T Consensus 173 ~I~vG~gpGs~~~tr~~~g~g-~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~k---ala~GAd~V~vGs~ 242 (366)
T 4fo4_A 173 AVKVGIGPGSICTTRIVTGVG-VPQITAIADAAGVANEYGIPVIADGGIRFSGDISK---AIAAGASCVMVGSM 242 (366)
T ss_dssp EEEECSSCSTTBCHHHHHCCC-CCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH---HHHTTCSEEEESTT
T ss_pred EEEEecCCCCCCCcccccCcc-cchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHH---HHHcCCCEEEEChH
Confidence 99982 0 0222 23 22333322333557888 7788888654 55679999998776
No 78
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=70.51 E-value=23 Score=26.96 Aligned_cols=66 Identities=14% Similarity=0.128 Sum_probs=39.3
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC-CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGS-GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~-~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+... ...++...... +...+..+++.|+++++.+|-+++++.+.
T Consensus 48 ~~dlvllD~~l~~-~~g~~l~~~l~~~~~~~ii~ls~~~-~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 114 (136)
T 2qzj_A 48 KYDLIFLEIILSD-GDGWTLCKKIRNVTTCPIVYMTYIN-EDQSILNALNSGGDDYLIKPLNLEILYAK 114 (136)
T ss_dssp CCSEEEEESEETT-EEHHHHHHHHHTTCCCCEEEEESCC-CHHHHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHccCCCCCEEEEEcCC-CHHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 4577777432111 1122344444322 34555554433 34556788999999999999999887653
No 79
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=70.30 E-value=4.6 Score=37.49 Aligned_cols=116 Identities=7% Similarity=0.030 Sum_probs=62.0
Q ss_pred chhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeEE
Q 018935 59 SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENIV 137 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~-~~ed~e~~~~~~~~~~~vv 137 (348)
-...+..|-|.|+|++|++.=-.|...++... .+..|-....++.-+ +.|.++.++......=|.+
T Consensus 105 ~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~-------------~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~V 171 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPELSFEESDDLIKE-------------CERYNIALITLVSVTTPKERVKKLVKHAKGFIYLL 171 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTTCCGGGCHHHHHH-------------HHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHH-------------HHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEE
Confidence 46689999999999999985212222222222 112233333333333 3566666665543333333
Q ss_pred Ee--CCCC-eee--ehhhhhhcccCCC-ceE--EEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 138 ID--LPDW-QVI--PAENIVASFQGSG-KTV--FAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 138 v~--~~DW-~iI--PlENliA~~q~~~-~~l--~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
-. .++- +-+ +++++++++.... ..+ -..++++++|+.+ .+ ++|||++-+.
T Consensus 172 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~---~~-~ADGVIVGSA 229 (252)
T 3tha_A 172 ASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRM---RK-VADGVIVGTS 229 (252)
T ss_dssp CCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHH---TT-TSSEEEECHH
T ss_pred ecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHH---Hh-cCCEEEECHH
Confidence 21 1121 122 2567777655432 223 3346788888754 34 6999998764
No 80
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=70.22 E-value=22 Score=31.13 Aligned_cols=69 Identities=16% Similarity=0.011 Sum_probs=32.7
Q ss_pred CCCeEEEeCCC----CeeeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC---CHHHHHHHHHh
Q 018935 132 QAENIVIDLPD----WQVIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE---DVKAVLALKEY 202 (348)
Q Consensus 132 ~~~~vvv~~~D----W~iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~---d~~~v~~l~~~ 202 (348)
..+.+++...+ .+-+.+|.+-.-.+..+..+++ -++++++++.++ +.|+|||++-+. .+..+.+++++
T Consensus 169 G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~---~~Gadgv~vgsal~~~~~~~~~~~~~ 245 (266)
T 2w6r_A 169 GAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF---LAGADAALAASVFHFREIDMRELKEY 245 (266)
T ss_dssp TCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH---HHTCSEEEESTTTC------------
T ss_pred CCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH---HcCCHHHHccHHHHcCCCCHHHHHHH
Confidence 46777774421 1112344332222222345665 467888888766 479999998763 23234444444
Q ss_pred h
Q 018935 203 F 203 (348)
Q Consensus 203 ~ 203 (348)
+
T Consensus 246 l 246 (266)
T 2w6r_A 246 L 246 (266)
T ss_dssp -
T ss_pred H
Confidence 4
No 81
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=69.88 E-value=18 Score=30.79 Aligned_cols=114 Identities=15% Similarity=0.121 Sum_probs=57.5
Q ss_pred HHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe--
Q 018935 62 VMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID-- 139 (348)
Q Consensus 62 ~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~-- 139 (348)
.+..|++.|+|.+.++..+.+ ..++.+. -|. ...-+.+.++++...+. ...+|++++.
T Consensus 86 ~~~~a~~~gad~v~l~~~~~~-~~~~~~~----------------~g~-~~~~~s~~t~~e~~~a~--~~g~d~v~~~~v 145 (227)
T 2tps_A 86 DVELALNLKADGIHIGQEDAN-AKEVRAA----------------IGD-MILGVSAHTMSEVKQAE--EDGADYVGLGPI 145 (227)
T ss_dssp CHHHHHHHTCSEEEECTTSSC-HHHHHHH----------------HTT-SEEEEEECSHHHHHHHH--HHTCSEEEECCS
T ss_pred HHHHHHHcCCCEEEECCCccC-HHHHHHh----------------cCC-cEEEEecCCHHHHHHHH--hCCCCEEEECCC
Confidence 356788889998888654321 1111110 011 11122346776644433 2257888861
Q ss_pred C-----------CCCeeeehhhhhhcccCCCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec-----CCH-HHHHHHH
Q 018935 140 L-----------PDWQVIPAENIVASFQGSGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV-----EDV-KAVLALK 200 (348)
Q Consensus 140 ~-----------~DW~iIPlENliA~~q~~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~-----~d~-~~v~~l~ 200 (348)
+ .+|..+ ..+...+. +..+++. ++ ++.++. +++.|+|||.+-+ +|+ +.++++.
T Consensus 146 ~~t~~~~~~~~~~~~~~l--~~~~~~~~--~~pvia~GGI~-~~nv~~---~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~ 217 (227)
T 2tps_A 146 YPTETKKDTRAVQGVSLI--EAVRRQGI--SIPIVGIGGIT-IDNAAP---VIQAGADGVSMISAISQAEDPESAARKFR 217 (227)
T ss_dssp SCCCSSSSCCCCCTTHHH--HHHHHTTC--CCCEEEESSCC-TTTSHH---HHHTTCSEEEESHHHHTSSCHHHHHHHHH
T ss_pred cCCCCCCCCCCccCHHHH--HHHHHhCC--CCCEEEEcCCC-HHHHHH---HHHcCCCEEEEhHHhhcCCCHHHHHHHHH
Confidence 1 134332 22222221 1345543 33 555544 4568999998765 577 6666665
Q ss_pred Hhh
Q 018935 201 EYF 203 (348)
Q Consensus 201 ~~~ 203 (348)
+.+
T Consensus 218 ~~~ 220 (227)
T 2tps_A 218 EEI 220 (227)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 82
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=69.68 E-value=13 Score=33.26 Aligned_cols=110 Identities=15% Similarity=0.079 Sum_probs=60.9
Q ss_pred chhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 59 SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
-.+++.++++.|++.+=++..+..-.+.+..+..- ++ +..+++ ..+.++++.+.+.. . .+++++.
T Consensus 31 ~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~----------~~--~l~vga-Gtvl~~d~~~~A~~-a-GAd~v~~ 95 (224)
T 1vhc_A 31 ILPLADTLAKNGLSVAEITFRSEAAADAIRLLRAN----------RP--DFLIAA-GTVLTAEQVVLAKS-S-GADFVVT 95 (224)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHH----------CT--TCEEEE-ESCCSHHHHHHHHH-H-TCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHh----------Cc--CcEEee-CcEeeHHHHHHHHH-C-CCCEEEE
Confidence 35789999999999888875332212222212110 00 122222 22456666544333 2 5788876
Q ss_pred eCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 139 DLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 139 ~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
-..| .| ++......+..++..+.|++|++. +++.|+|-|-+-|..
T Consensus 96 p~~d---~~---v~~~ar~~g~~~i~Gv~t~~e~~~---A~~~Gad~vk~Fpa~ 140 (224)
T 1vhc_A 96 PGLN---PK---IVKLCQDLNFPITPGVNNPMAIEI---ALEMGISAVKFFPAE 140 (224)
T ss_dssp SSCC---HH---HHHHHHHTTCCEECEECSHHHHHH---HHHTTCCEEEETTTT
T ss_pred CCCC---HH---HHHHHHHhCCCEEeccCCHHHHHH---HHHCCCCEEEEeeCc
Confidence 4444 22 222222233344555899999865 568999999888843
No 83
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=69.67 E-value=8 Score=35.31 Aligned_cols=132 Identities=12% Similarity=0.062 Sum_probs=73.6
Q ss_pred CcEEEEEe--CchhHHHHHHHhCCcEEEEcCcch--h----hhhhccceeeeeeeeecCCcccc--CCCCeeEEEEEecC
Q 018935 50 PKRVWIWT--ESKQVMTAAVERGWNTFVFLSENQ--Q----LAIDWSTIALLDPLFIKEGEVYD--SGDRRVGSIIEVST 119 (348)
Q Consensus 50 ~K~vWiw~--~~K~~vT~ALEsG~~~~v~~~~~~--e----~~~~l~~i~~i~~l~~~~g~~~~--~~gk~v~~~~~v~~ 119 (348)
....|+|. .+.+.+..|+.+|+|.++++-||. + +......+. .. +.. ++ ..+.. .++.|..
T Consensus 7 ~~rs~L~~p~~~~~~~~~a~~~gaD~vilDlEdav~~~~~~k~~Ar~~v~--~~--l~~---~~~~~~~~~--~~VRv~~ 77 (284)
T 1sgj_A 7 LLRSVLFAPGNRADLIAKLPRSAPDAVVIDLEDAVPGTAEAKAAARPVAH--DA--ARD---LIAAAPHLA--VFVRVNA 77 (284)
T ss_dssp CCSEEEEEETTCHHHHHHTTTTCCSEEEEESSTTSCSSHHHHHHHHHHHH--HH--HHH---HHHHSTTSE--EEEECCC
T ss_pred CCceEEEccCCCHHHHHHHHhCCCCEEEEECCCCCCCchhhHHHHHHHHH--HH--HHh---cccccCCCe--EEEEeCC
Confidence 34567776 688999999999999999997652 1 111111110 00 000 01 11233 3334443
Q ss_pred ---hhhhhhhccccCCCCeEEEeCCCCeeeehhhh---hhccc--CCCceEEEEcCCHHHHHHHHHHhhc-ccCeEEEec
Q 018935 120 ---PQELQQLQPADGQAENIVIDLPDWQVIPAENI---VASFQ--GSGKTVFAISKTPSEAQIFLEALEQ-GLGGIVLKV 190 (348)
Q Consensus 120 ---~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENl---iA~~q--~~~~~l~a~v~~~~eA~~al~~LE~-G~DGVvl~~ 190 (348)
+...+.+.......+.+++ +++=-.|++ .+.+. +.+..|++.+.+++-...+-+++.. |+||+.+-+
T Consensus 78 ~~~~~~~~dl~~~l~g~~~i~l----Pkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~ 153 (284)
T 1sgj_A 78 LHSPYFEDDLSVLTPELSGVVV----PKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGA 153 (284)
T ss_dssp TTSTTHHHHGGGCCTTSSEEEE----CSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECH
T ss_pred CCCHhHHHHHHHHhccCCEEEe----CCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECH
Confidence 4422222222224556666 222222332 22221 2356799999999988888888853 899999998
Q ss_pred CCHH
Q 018935 191 EDVK 194 (348)
Q Consensus 191 ~d~~ 194 (348)
.|..
T Consensus 154 ~DL~ 157 (284)
T 1sgj_A 154 EDYT 157 (284)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 84
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=69.32 E-value=21 Score=29.41 Aligned_cols=79 Identities=15% Similarity=0.117 Sum_probs=46.4
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-... ...|.++++..-+.. .--.++..+.. ....++......+ ......+++.|++|++.+|-++
T Consensus 30 ~~~~~~~al~~~---~~~dlvllD~~lp~~-~g~~~~~~lr~~~~~~~ii~lt~~~~-~~~~~~~~~~ga~~~l~Kp~~~ 104 (220)
T 1p2f_A 30 TFLTGEDFLNDE---EAFHVVVLDVMLPDY-SGYEICRMIKETRPETWVILLTLLSD-DESVLKGFEAGADDYVTKPFNP 104 (220)
T ss_dssp EESSHHHHHHCC---SCCSEEEEESBCSSS-BHHHHHHHHHHHCTTSEEEEEESCCS-HHHHHHHHHHTCSEEEESSCCH
T ss_pred EECCHHHHHHhc---CCCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCcEEEEEcCCC-HHHHHHHHHcCCCEEEECCCCH
Confidence 345555433322 456788885442221 11223333321 3556666655443 4456788999999999999999
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++.+.
T Consensus 105 ~~L~~~ 110 (220)
T 1p2f_A 105 EILLAR 110 (220)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877554
No 85
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=69.29 E-value=3.7 Score=36.61 Aligned_cols=109 Identities=9% Similarity=0.082 Sum_probs=53.8
Q ss_pred HHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecC-hhhhhhhccccCCCCeEEEeC--
Q 018935 64 TAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVST-PQELQQLQPADGQAENIVIDL-- 140 (348)
Q Consensus 64 T~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~-~ed~e~~~~~~~~~~~vvv~~-- 140 (348)
..|.+.|+|+++++....+...++-.. .++.|......+...+ .+.++.+.... .+++.+..
T Consensus 112 ~~a~~aGadgv~v~d~~~~~~~~~~~~-------------~~~~g~~~i~~~a~~t~~e~~~~~~~~~--~g~v~~~s~~ 176 (262)
T 1rd5_A 112 AKMKEAGVHGLIVPDLPYVAAHSLWSE-------------AKNNNLELVLLTTPAIPEDRMKEITKAS--EGFVYLVSVN 176 (262)
T ss_dssp HHHHHTTCCEEECTTCBTTTHHHHHHH-------------HHHTTCEECEEECTTSCHHHHHHHHHHC--CSCEEEECSS
T ss_pred HHHHHcCCCEEEEcCCChhhHHHHHHH-------------HHHcCCceEEEECCCCCHHHHHHHHhcC--CCeEEEecCC
Confidence 349999999999876433222222111 1122333333333333 33434444332 24555432
Q ss_pred --CCC-eeee--hhhhhhcccCC-CceEE--EEcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 141 --PDW-QVIP--AENIVASFQGS-GKTVF--AISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 141 --~DW-~iIP--lENliA~~q~~-~~~l~--a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
++- +-+| ...+++++.+. +..|+ .-+++++.++. +++.|+|||++-+
T Consensus 177 G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~---~~~~GAdgvvVGS 231 (262)
T 1rd5_A 177 GVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQ---IAQWGADGVIIGS 231 (262)
T ss_dssp CCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHH---HHHTTCSEEEECH
T ss_pred CCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHH---HHHcCCCEEEECh
Confidence 111 0223 33466655421 22333 34566666665 5678999999865
No 86
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=68.84 E-value=23 Score=29.64 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=56.3
Q ss_pred chhHHHHHHHhCCcEEEEcCcc------hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 018935 59 SKQVMTAAVERGWNTFVFLSEN------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~------~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~ 132 (348)
-.+.+..+++.|++.+-+...+ .+.++++.++. +.-+ +..++. ++.+.+ ... .
T Consensus 28 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~-------------~~~~--v~v~v~----~~~~~a-~~~-g 86 (215)
T 1xi3_A 28 EVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLT-------------REYD--ALFFVD----DRVDVA-LAV-D 86 (215)
T ss_dssp HHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHH-------------HHTT--CEEEEE----SCHHHH-HHH-T
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHH-------------HHcC--CeEEEc----ChHHHH-HHc-C
Confidence 3688999999999998775321 12222222221 0011 122221 222222 222 5
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
++.+.+...|. |.+.+ .++. .+..+...+.+.+|++. +.+.|+|.|++.+
T Consensus 87 ad~v~l~~~~~---~~~~~-~~~~-~~~~~~v~~~t~~e~~~---~~~~g~d~i~~~~ 136 (215)
T 1xi3_A 87 ADGVQLGPEDM---PIEVA-KEIA-PNLIIGASVYSLEEALE---AEKKGADYLGAGS 136 (215)
T ss_dssp CSEEEECTTSC---CHHHH-HHHC-TTSEEEEEESSHHHHHH---HHHHTCSEEEEEC
T ss_pred CCEEEECCccC---CHHHH-HHhC-CCCEEEEecCCHHHHHH---HHhcCCCEEEEcC
Confidence 67888865554 34433 3332 23345556789988764 5678999999854
No 87
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=68.71 E-value=9.9 Score=32.42 Aligned_cols=105 Identities=16% Similarity=0.160 Sum_probs=57.3
Q ss_pred chhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 59 SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
+.+.+..|++.|+|.+.++..+.+..+...++ |..+ ++.+.++++...+. ....|++.+
T Consensus 69 ~~~~i~~a~~~Gad~V~~~~~~~~~~~~~~~~-----------------g~~~--~~g~~t~~e~~~a~--~~G~d~v~v 127 (212)
T 2v82_A 69 KPEQVDALARMGCQLIVTPNIHSEVIRRAVGY-----------------GMTV--CPGCATATEAFTAL--EAGAQALKI 127 (212)
T ss_dssp SHHHHHHHHHTTCCEEECSSCCHHHHHHHHHT-----------------TCEE--ECEECSHHHHHHHH--HTTCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHc-----------------CCCE--EeecCCHHHHHHHH--HCCCCEEEE
Confidence 46789999999999998776554444333222 1111 11257777754442 235788887
Q ss_pred eCCCCeeeehhhhhhcccC-C--CceEEEEcC-CHHHHHHHHHHhhcccCeEEEec
Q 018935 139 DLPDWQVIPAENIVASFQG-S--GKTVFAISK-TPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 139 ~~~DW~iIPlENliA~~q~-~--~~~l~a~v~-~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
...+ ...++.+ .++.. . +..|++.-. +.++++.+ ++.|+|||++-+
T Consensus 128 ~~t~--~~g~~~~-~~l~~~~~~~ipvia~GGI~~~~i~~~---~~~Ga~gv~vGs 177 (212)
T 2v82_A 128 FPSS--AFGPQYI-KALKAVLPSDIAVFAVGGVTPENLAQW---IDAGCAGAGLGS 177 (212)
T ss_dssp TTHH--HHCHHHH-HHHHTTSCTTCEEEEESSCCTTTHHHH---HHHTCSEEEECT
T ss_pred ecCC--CCCHHHH-HHHHHhccCCCeEEEeCCCCHHHHHHH---HHcCCCEEEECh
Confidence 2211 1223322 22211 1 245655421 25555544 567999999764
No 88
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=68.46 E-value=8.3 Score=36.25 Aligned_cols=42 Identities=14% Similarity=0.011 Sum_probs=35.8
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 018935 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (348)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~~ 204 (348)
.+++.++.+++|++.++ +.|+|+|.|.+-++++++++.+.+.
T Consensus 198 ~~i~vev~tlee~~~A~---~aGaD~I~ld~~~~~~l~~~v~~l~ 239 (299)
T 2jbm_A 198 LKVEVECSSLQEAVQAA---EAGADLVLLDNFKPEELHPTATVLK 239 (299)
T ss_dssp SCEEEEESSHHHHHHHH---HTTCSEEEEESCCHHHHHHHHHHHH
T ss_pred CeEEEecCCHHHHHHHH---HcCCCEEEECCCCHHHHHHHHHHhh
Confidence 57999999999987655 6799999999999999988777663
No 89
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=68.31 E-value=22 Score=27.79 Aligned_cols=116 Identities=9% Similarity=0.018 Sum_probs=65.4
Q ss_pred CcEEEEEeC---chhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhh
Q 018935 50 PKRVWIWTE---SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQL 126 (348)
Q Consensus 50 ~K~vWiw~~---~K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~ 126 (348)
++.+.|--- -..+.....+.|++-++++.+ .+..+++..- |.. ..+...++++.++.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~-~~~~~~~~~~-----------------~~~-~~~gd~~~~~~l~~~ 66 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS-KEKIELLEDE-----------------GFD-AVIADPTDESFYRSL 66 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC-HHHHHHHHHT-----------------TCE-EEECCTTCHHHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC-HHHHHHHHHC-----------------CCc-EEECCCCCHHHHHhC
Confidence 345555321 356777777889987777664 4444433321 110 122234566655544
Q ss_pred ccccCCCCeEEEeCCCCee-eehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 127 QPADGQAENIVIDLPDWQV-IPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 127 ~~~~~~~~~vvv~~~DW~i-IPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
....++.+|+...|... +-+- ..|.-.+ ..++++.+++.+.++.+ .+.|+|-|+....
T Consensus 67 --~~~~~d~vi~~~~~~~~n~~~~-~~a~~~~-~~~iia~~~~~~~~~~l---~~~G~~~vi~p~~ 125 (141)
T 3llv_A 67 --DLEGVSAVLITGSDDEFNLKIL-KALRSVS-DVYAIVRVSSPKKKEEF---EEAGANLVVLVAD 125 (141)
T ss_dssp --CCTTCSEEEECCSCHHHHHHHH-HHHHHHC-CCCEEEEESCGGGHHHH---HHTTCSEEEEHHH
T ss_pred --CcccCCEEEEecCCHHHHHHHH-HHHHHhC-CceEEEEEcChhHHHHH---HHcCCCEEECHHH
Confidence 23467888875554321 1111 1122223 66899999999988766 4679998775544
No 90
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=68.18 E-value=25 Score=27.30 Aligned_cols=86 Identities=13% Similarity=0.146 Sum_probs=48.1
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
...+.++.-..... ...+.+|++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-
T Consensus 36 ~~~~~~~al~~l~~-~~~dlii~D~~l~~-~~g~~~~~~lr~~~~~~~~pii~~s~~~-~~~~~~~~~~~g~~~~l~KP~ 112 (154)
T 3gt7_A 36 HVRNGREAVRFLSL-TRPDLIISDVLMPE-MDGYALCRWLKGQPDLRTIPVILLTILS-DPRDVVRSLECGADDFITKPC 112 (154)
T ss_dssp EESSHHHHHHHHTT-CCCSEEEEESCCSS-SCHHHHHHHHHHSTTTTTSCEEEEECCC-SHHHHHHHHHHCCSEEEESSC
T ss_pred EeCCHHHHHHHHHh-CCCCEEEEeCCCCC-CCHHHHHHHHHhCCCcCCCCEEEEECCC-ChHHHHHHHHCCCCEEEeCCC
Confidence 34565543333222 25677888654222 111223333322 344566655433 344567788999999999999
Q ss_pred CHHHHHHH-HHhhc
Q 018935 192 DVKAVLAL-KEYFD 204 (348)
Q Consensus 192 d~~~v~~l-~~~~~ 204 (348)
++.++.+. +.++.
T Consensus 113 ~~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 113 KDVVLASHVKRLLS 126 (154)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 98877653 34443
No 91
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=67.71 E-value=17 Score=26.30 Aligned_cols=66 Identities=11% Similarity=0.033 Sum_probs=40.2
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc----CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ----GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q----~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-..-..--.++..+. .....++.. .. .+......+++.|+++++.+|-++.++.+.
T Consensus 49 ~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~-~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 118 (127)
T 2gkg_A 49 RPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GN-PDGFAQHRKLKAHADEYVAKPVDADQLVER 118 (127)
T ss_dssp CCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-EC-GGGHHHHHHSTTCCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ec-CCchhHHHHHHhCcchheeCCCCHHHHHHH
Confidence 4577777433220112223444433 235567766 43 344566688999999999999999876543
No 92
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=66.95 E-value=25 Score=30.33 Aligned_cols=112 Identities=16% Similarity=0.143 Sum_probs=60.2
Q ss_pred hhHHHHHHHhCCcEEEEcC-cchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecC-hhhhhhhccccCCCCeEE
Q 018935 60 KQVMTAAVERGWNTFVFLS-ENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVST-PQELQQLQPADGQAENIV 137 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~-~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~-~ed~e~~~~~~~~~~~vv 137 (348)
.+++.++.+.|++.+-+.. +..+.+++...+..+.. ..++ ++ ++. . -+.. .++.+.+. ...++.+.
T Consensus 39 ~~~a~~~~~~G~~~i~~~~~~~i~~i~~~~~~p~i~~--~~~~--~~-~~~---~--~i~~~~~~i~~~~--~~Gad~V~ 106 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRANSVRDIKEIQAITDLPIIGI--IKKD--YP-PQE---P--FITATMTEVDQLA--ALNIAVIA 106 (234)
T ss_dssp HHHHHHHHHHTCSEEEEESHHHHHHHHTTCCSCEEEE--CBCC--CT-TSC---C--CBSCSHHHHHHHH--TTTCSEEE
T ss_pred HHHHHHHHHCCCcEeecCCHHHHHHHHHhCCCCEEee--EcCC--CC-ccc---c--ccCChHHHHHHHH--HcCCCEEE
Confidence 6788999999999988762 22333333333222111 0111 11 010 1 1222 23333322 23578887
Q ss_pred EeCCC---CeeeehhhhhhcccCC--CceEEEEcCCHHHHHHHHHHhhcccCeE
Q 018935 138 IDLPD---WQVIPAENIVASFQGS--GKTVFAISKTPSEAQIFLEALEQGLGGI 186 (348)
Q Consensus 138 v~~~D---W~iIPlENliA~~q~~--~~~l~a~v~~~~eA~~al~~LE~G~DGV 186 (348)
+.... +.--.+..++..+... +..++..+.+.+||+ .+++.|+|.|
T Consensus 107 l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~---~a~~~Gad~i 157 (234)
T 1yxy_A 107 MDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGL---VAHQAGIDFV 157 (234)
T ss_dssp EECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHH---HHHHTTCSEE
T ss_pred EcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHH---HHHHcCCCEE
Confidence 75542 2112345666665433 557888999999965 4567899998
No 93
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=66.81 E-value=14 Score=34.29 Aligned_cols=107 Identities=10% Similarity=0.065 Sum_probs=60.1
Q ss_pred hhHHHHHHHhCCcEEEEcCcc-hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~-~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
.+.+..|+|.|+|.|.+..++ .+..+.+.+ .|.+ +++.+.+.++...+.. ..+|++++
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~-----------------~g~~--v~~~v~~~~~a~~~~~--~GaD~i~v 136 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAGNPSKYMERFHE-----------------AGII--VIPVVPSVALAKRMEK--IGADAVIA 136 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSSCGGGTHHHHHH-----------------TTCE--EEEEESSHHHHHHHHH--TTCSCEEE
T ss_pred HHHHHHHHHCCCCEEEECCCChHHHHHHHHH-----------------cCCe--EEEEeCCHHHHHHHHH--cCCCEEEE
Confidence 678899999999999987543 222222211 1322 3356778776554432 25899999
Q ss_pred eCC--CCe--eeehhhhhhcccC-CCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 018935 139 DLP--DWQ--VIPAENIVASFQG-SGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 139 ~~~--DW~--iIPlENliA~~q~-~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
... +.. -.|.-.++.++.. .+..|++. ++|.+++..+ |+.|+|||.+-+
T Consensus 137 ~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~a---l~~GAdgV~vGs 192 (332)
T 2z6i_A 137 EGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAG---FMLGAEAVQVGT 192 (332)
T ss_dssp ECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHH---HHTTCSEEEECH
T ss_pred ECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHH---HHcCCCEEEecH
Confidence 653 111 1222234443221 12345543 4566666554 457999999864
No 94
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=66.55 E-value=21 Score=26.73 Aligned_cols=65 Identities=14% Similarity=0.264 Sum_probs=38.9
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccC---CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 133 AENIVIDLPDWQVIPAENIVASFQG---SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~---~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
.+.+|++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-+++++.+.
T Consensus 53 ~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 120 (136)
T 3hdv_A 53 IGLMITDLRMQP-ESGLDLIRTIRASERAALSIIVVSGDT-DVEEAVDVMHLGVVDFLLKPVDLGKLLEL 120 (136)
T ss_dssp EEEEEECSCCSS-SCHHHHHHHHHTSTTTTCEEEEEESSC-CHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CcEEEEeccCCC-CCHHHHHHHHHhcCCCCCCEEEEeCCC-ChHHHHHHHhCCcceEEeCCCCHHHHHHH
Confidence 466666433211 122233444332 334566555543 34566788999999999999999877643
No 95
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=66.25 E-value=23 Score=29.16 Aligned_cols=81 Identities=12% Similarity=0.122 Sum_probs=47.9
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-..... ...|.++++..-+.. .--.++..+.. ....++...... +......+++.|++|++.+|-++
T Consensus 31 ~~~~~~~a~~~~~~-~~~dlvllD~~l~~~-~g~~~~~~lr~~~~~~~ii~ls~~~-~~~~~~~~~~~ga~~~l~Kp~~~ 107 (225)
T 1kgs_A 31 VCYDGEEGMYMALN-EPFDVVILDIMLPVH-DGWEILKSMRESGVNTPVLMLTALS-DVEYRVKGLNMGADDYLPKPFDL 107 (225)
T ss_dssp EESSHHHHHHHHHH-SCCSEEEEESCCSSS-CHHHHHHHHHHTTCCCCEEEEESSC-HHHHHHHTCCCCCSEEEESSCCH
T ss_pred EECCHHHHHHHHhc-CCCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCCEEEEeCCC-CHHHHHHHHhCCccEEEeCCCCH
Confidence 34565543332222 356788886543322 11233443322 345666655443 45567789999999999999999
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++.+.
T Consensus 108 ~~l~~~ 113 (225)
T 1kgs_A 108 RELIAR 113 (225)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887553
No 96
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=66.16 E-value=4.4 Score=36.07 Aligned_cols=124 Identities=15% Similarity=0.135 Sum_probs=63.2
Q ss_pred hhHHHHHHHhCCcEEEEcCc--chhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 018935 60 KQVMTAAVERGWNTFVFLSE--NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~--~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vv 137 (348)
.+.+..|++.|+|++.+..+ .-+...++-+ .+.+.|+.++..+.-.++.+ .+.......|++.
T Consensus 75 ~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~-------------~i~~~g~~~gv~~~p~t~~e--~~~~~~~~~D~v~ 139 (230)
T 1tqj_A 75 EKYVEDFAKAGADIISVHVEHNASPHLHRTLC-------------QIRELGKKAGAVLNPSTPLD--FLEYVLPVCDLIL 139 (230)
T ss_dssp GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHH-------------HHHHTTCEEEEEECTTCCGG--GGTTTGGGCSEEE
T ss_pred HHHHHHHHHcCCCEEEECcccccchhHHHHHH-------------HHHHcCCcEEEEEeCCCcHH--HHHHHHhcCCEEE
Confidence 34679999999999998876 2111111111 12334666666654455533 3333344678887
Q ss_pred EeCCCC-----eeee--hhhhhhcccCC------CceEEEEcCCHHHHHHHHHHhhcccCeEEEe-----cCCHH-HHHH
Q 018935 138 IDLPDW-----QVIP--AENIVASFQGS------GKTVFAISKTPSEAQIFLEALEQGLGGIVLK-----VEDVK-AVLA 198 (348)
Q Consensus 138 v~~~DW-----~iIP--lENliA~~q~~------~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~-----~~d~~-~v~~ 198 (348)
+-.-.+ +.+| +|.| +++... +..|. .-.-... +.+-.+.+.|+||+++- .+|+. .+++
T Consensus 140 ~msv~pg~ggq~~~~~~~~~i-~~lr~~~~~~~~~~~I~-v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d~~~~~~~ 216 (230)
T 1tqj_A 140 IMSVNPGFGGQSFIPEVLPKI-RALRQMCDERGLDPWIE-VDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPNYAEAIAG 216 (230)
T ss_dssp EESSCC----CCCCGGGHHHH-HHHHHHHHHHTCCCEEE-EESSCCT-TTTHHHHHHTCCEEEESHHHHTSSCHHHHHHH
T ss_pred EEEeccccCCccCcHHHHHHH-HHHHHHHHhcCCCCcEE-EECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCHHHHHHH
Confidence 643322 2343 3332 222111 12222 2222222 33445577899999985 34664 4445
Q ss_pred HHH
Q 018935 199 LKE 201 (348)
Q Consensus 199 l~~ 201 (348)
|++
T Consensus 217 l~~ 219 (230)
T 1tqj_A 217 VRN 219 (230)
T ss_dssp HHT
T ss_pred HHH
Confidence 544
No 97
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=66.16 E-value=24 Score=27.98 Aligned_cols=104 Identities=12% Similarity=0.097 Sum_probs=61.5
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~ 139 (348)
..+.....+.|.+-++++.+ .+.++++.+.+. . ..+...++++.++.+. ...++.+|+-
T Consensus 20 ~~la~~L~~~g~~v~vid~~-~~~~~~~~~~g~-----------------~-~i~gd~~~~~~l~~a~--i~~ad~vi~~ 78 (140)
T 3fwz_A 20 SLLGEKLLASDIPLVVIETS-RTRVDELRERGV-----------------R-AVLGNAANEEIMQLAH--LECAKWLILT 78 (140)
T ss_dssp HHHHHHHHHTTCCEEEEESC-HHHHHHHHHTTC-----------------E-EEESCTTSHHHHHHTT--GGGCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEECC-HHHHHHHHHcCC-----------------C-EEECCCCCHHHHHhcC--cccCCEEEEE
Confidence 56666666789998887764 445544433211 1 1122234455444432 2357888876
Q ss_pred CCCCeeeehhhh----hhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 140 LPDWQVIPAENI----VASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 140 ~~DW~iIPlENl----iA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
..+- .+|+ .++......++++.+++.+.++.+. +.|+|-|+....
T Consensus 79 ~~~~----~~n~~~~~~a~~~~~~~~iiar~~~~~~~~~l~---~~G~d~vi~p~~ 127 (140)
T 3fwz_A 79 IPNG----YEAGEIVASARAKNPDIEIIARAHYDDEVAYIT---ERGANQVVMGER 127 (140)
T ss_dssp CSCH----HHHHHHHHHHHHHCSSSEEEEEESSHHHHHHHH---HTTCSEEEEHHH
T ss_pred CCCh----HHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHH---HCCCCEEECchH
Confidence 5553 3443 1222234569999999999988664 589998885544
No 98
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=66.10 E-value=32 Score=25.02 Aligned_cols=65 Identities=12% Similarity=0.144 Sum_probs=39.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++.+.+|-+++++.+
T Consensus 46 ~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~Kp~~~~~l~~ 111 (122)
T 1zgz_A 46 SVDLILLDINLPD-ENGLMLTRALRERSTVGIILVTGRS-DRIDRIVGLEMGADDYVTKPLELRELVV 111 (122)
T ss_dssp CCSEEEEESCCSS-SCHHHHHHHHHTTCCCEEEEEESSC-CHHHHHHHHHHTCSEEEESSCCHHHHHH
T ss_pred CCCEEEEeCCCCC-CChHHHHHHHHhcCCCCEEEEECCC-ChhhHHHHHHhCHHHHccCCCCHHHHHH
Confidence 4677777544222 122234444432 344566555443 3345567889999999999999887654
No 99
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=65.92 E-value=16 Score=34.44 Aligned_cols=107 Identities=11% Similarity=0.133 Sum_probs=60.1
Q ss_pred hhHHHHHHHhCCcEEEEcCcc--hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 018935 60 KQVMTAAVERGWNTFVFLSEN--QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~--~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vv 137 (348)
.+.+..++|.|++.+.+.-+. .+.++.+... |.. +...+.+.++...+.. ..+|+++
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~~-----------------g~~--v~~~v~t~~~a~~a~~--~GaD~i~ 170 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRRA-----------------GTL--TLVTATTPEEARAVEA--AGADAVI 170 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHHT-----------------TCE--EEEEESSHHHHHHHHH--TTCSEEE
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHHC-----------------CCe--EEEECCCHHHHHHHHH--cCCCEEE
Confidence 667888999999988776432 3444433221 333 2345678776443332 3589999
Q ss_pred EeCCC-----Cee----------eehhhhhhcccC-CCceEEEE--cCCHHHHHHHHHHhhcccCeEEEec
Q 018935 138 IDLPD-----WQV----------IPAENIVASFQG-SGKTVFAI--SKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 138 v~~~D-----W~i----------IPlENliA~~q~-~~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
++... .+. ++.-.++.++.. .+..|++. +.|.+++.. +|+.|+|||.+-+
T Consensus 171 v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~---~l~~GAd~V~vGs 238 (369)
T 3bw2_A 171 AQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAA---VLAAGADAAQLGT 238 (369)
T ss_dssp EECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHH---HHHTTCSEEEESH
T ss_pred EeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHH---HHHcCCCEEEECh
Confidence 96531 111 342334444321 13345543 456666554 4568999999864
No 100
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=65.64 E-value=20 Score=30.94 Aligned_cols=28 Identities=14% Similarity=0.134 Sum_probs=21.1
Q ss_pred EEEEEe--CchhHHHHHHHhCCcEEEEcCc
Q 018935 52 RVWIWT--ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 52 ~vWiw~--~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
.+|+-- .+.+.+..+++.|+|.+++..+
T Consensus 76 pv~v~ggi~~~~~~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 76 QVELSGGIRDDESLAAALATGCARVNVGTA 105 (244)
T ss_dssp EEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEECch
Confidence 366532 3567799999999999998764
No 101
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=65.63 E-value=24 Score=26.35 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=29.2
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
...++...... +......+++.|+++.+.+|-+++++.+.
T Consensus 81 ~~pii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~~L~~~ 120 (129)
T 3h1g_A 81 EIPIIMITAEG-GKAEVITALKAGVNNYIVKPFTPQVLKEK 120 (129)
T ss_dssp TCCEEEEESCC-SHHHHHHHHHHTCCEEEESCCCHHHHHHH
T ss_pred CCeEEEEeCCC-ChHHHHHHHHcCccEEEeCCCCHHHHHHH
Confidence 34566655543 33456678999999999999999887653
No 102
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=65.55 E-value=14 Score=35.47 Aligned_cols=112 Identities=16% Similarity=0.148 Sum_probs=61.7
Q ss_pred hhHHHHHHHhCCcEEEEcCcc--h-hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 018935 60 KQVMTAAVERGWNTFVFLSEN--Q-QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~--~-e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v 136 (348)
.+.+..++|.|+|.|++...+ . ...+.+..+.. .-+.++. ...+.++++.+.+.. ..+|++
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~-------------~~~~~Vi-vg~v~t~e~A~~l~~--aGaD~I 170 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS-------------KMNIDVI-VGNVVTEEATKELIE--NGADGI 170 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH-------------HCCCEEE-EEEECSHHHHHHHHH--TTCSEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH-------------hcCCcEE-EccCCCHHHHHHHHH--cCcCEE
Confidence 788999999999988874322 1 11111111110 0011111 125678887555443 367889
Q ss_pred EEeC-----------CCCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 137 VIDL-----------PDWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 137 vv~~-----------~DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
++-. .+|. .| +.++...++..+..|++ -+.+.+++..++ ..|+|||++-+.
T Consensus 171 ~VG~~~Gs~~~tr~~~g~g-~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kal---a~GAd~V~vGs~ 238 (361)
T 3khj_A 171 KVGIGPGSICTTRIVAGVG-VPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL---AVGASSVMIGSI 238 (361)
T ss_dssp EECSSCCTTCCHHHHTCBC-CCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHH---HHTCSEEEESTT
T ss_pred EEecCCCcCCCcccccCCC-CCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHH---HcCCCEEEEChh
Confidence 8821 1222 23 22332222222456887 578888876654 569999998765
No 103
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=65.40 E-value=6.2 Score=34.45 Aligned_cols=20 Identities=10% Similarity=0.250 Sum_probs=17.8
Q ss_pred hhHHHHHHHhCCcEEEEcCc
Q 018935 60 KQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~ 79 (348)
.+.+..|++.|+|.++++..
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~ 117 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL 117 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC
T ss_pred HHHHHHHHHCCCCEEEECCC
Confidence 58999999999999999864
No 104
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=65.31 E-value=55 Score=27.97 Aligned_cols=51 Identities=12% Similarity=0.056 Sum_probs=34.7
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
.++.+-+...+ .|.+.+-... . +..+...+.|.+|++. +.+.|+|.|++.+
T Consensus 88 gad~v~l~~~~---~~~~~~~~~~-~-~~~ig~sv~t~~~~~~---a~~~gaD~i~~~~ 138 (221)
T 1yad_A 88 TIHRVQLPSGS---FSPKQIRARF-P-HLHIGRSVHSLEEAVQ---AEKEDADYVLFGH 138 (221)
T ss_dssp TCCEEEECTTS---CCHHHHHHHC-T-TCEEEEEECSHHHHHH---HHHTTCSEEEEEC
T ss_pred CCCEEEeCCCc---cCHHHHHHHC-C-CCEEEEEcCCHHHHHH---HHhCCCCEEEECC
Confidence 56777776554 3555554433 2 4467778889988765 4578999999966
No 105
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=65.15 E-value=24 Score=26.64 Aligned_cols=40 Identities=5% Similarity=0.020 Sum_probs=28.7
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
...++...... +......+++.|+++++.+|-+++++.+.
T Consensus 80 ~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~KP~~~~~l~~~ 119 (136)
T 3kto_A 80 HLPTIVMASSS-DIPTAVRAMRASAADFIEKPFIEHVLVHD 119 (136)
T ss_dssp CCCEEEEESSC-CHHHHHHHHHTTCSEEEESSBCHHHHHHH
T ss_pred CCCEEEEEcCC-CHHHHHHHHHcChHHheeCCCCHHHHHHH
Confidence 44565554433 44556778899999999999999877653
No 106
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=65.02 E-value=19 Score=31.24 Aligned_cols=28 Identities=14% Similarity=0.183 Sum_probs=21.1
Q ss_pred EEEEEe--CchhHHHHHHHhCCcEEEEcCc
Q 018935 52 RVWIWT--ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 52 ~vWiw~--~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
.+++-- .+.+.+..+++.|+|.+++..+
T Consensus 77 pv~v~ggI~~~~~~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 77 KVELSGGIRDDDTLAAALATGCTRVNLGTA 106 (244)
T ss_dssp EEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred cEEEECCcCCHHHHHHHHHcCCCEEEECch
Confidence 466632 3567799999999999998764
No 107
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=64.76 E-value=38 Score=25.59 Aligned_cols=81 Identities=15% Similarity=0.127 Sum_probs=47.8
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
...+.++....... ...+.+|++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|-
T Consensus 37 ~~~~~~~a~~~l~~-~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~~pii~ls~~~-~~~~~~~~~~~g~~~~l~kp~ 113 (147)
T 2zay_A 37 QCGNAIEAVPVAVK-THPHLIITEANMPK-ISGMDLFNSLKKNPQTASIPVIALSGRA-TAKEEAQLLDMGFIDFIAKPV 113 (147)
T ss_dssp EESSHHHHHHHHHH-HCCSEEEEESCCSS-SCHHHHHHHHHTSTTTTTSCEEEEESSC-CHHHHHHHHHHTCSEEEESSC
T ss_pred EeCCHHHHHHHHHc-CCCCEEEEcCCCCC-CCHHHHHHHHHcCcccCCCCEEEEeCCC-CHHHHHHHHhCCCCEEEeCCC
Confidence 34555543332222 24677888544222 222334444443 345666665543 345667888999999999999
Q ss_pred CHHHHHHH
Q 018935 192 DVKAVLAL 199 (348)
Q Consensus 192 d~~~v~~l 199 (348)
+++++.+.
T Consensus 114 ~~~~L~~~ 121 (147)
T 2zay_A 114 NAIRLSAR 121 (147)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99887553
No 108
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=64.74 E-value=41 Score=25.08 Aligned_cols=82 Identities=16% Similarity=0.049 Sum_probs=47.0
Q ss_pred EecChhhhhhhcccc----CCCCeEEEeCCCCeeeehhhhhhccc------CCCceEEEEcCCHHHHHHHHHHhhcc-cC
Q 018935 116 EVSTPQELQQLQPAD----GQAENIVIDLPDWQVIPAENIVASFQ------GSGKTVFAISKTPSEAQIFLEALEQG-LG 184 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~----~~~~~vvv~~~DW~iIPlENliA~~q------~~~~~l~a~v~~~~eA~~al~~LE~G-~D 184 (348)
...+.++.-...... ...+.+|++..-.. ..--.++..+. .....++..... .+......+++.| ++
T Consensus 40 ~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~~~ii~~t~~-~~~~~~~~~~~~g~~~ 117 (146)
T 3ilh_A 40 SVTSGNAAINKLNELYAAGRWPSIICIDINMPG-INGWELIDLFKQHFQPMKNKSIVCLLSSS-LDPRDQAKAEASDWVD 117 (146)
T ss_dssp EESSHHHHHHHHHHHHTSSCCCSEEEEESSCSS-SCHHHHHHHHHHHCGGGTTTCEEEEECSS-CCHHHHHHHHHCSSCC
T ss_pred ecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCC-CCHHHHHHHHHHhhhhccCCCeEEEEeCC-CChHHHHHHHhcCCcc
Confidence 445655533332221 35678888554222 22223333332 234556555444 3445566889999 99
Q ss_pred eEEEecCCHHHHHHH
Q 018935 185 GIVLKVEDVKAVLAL 199 (348)
Q Consensus 185 GVvl~~~d~~~v~~l 199 (348)
+++.+|-+++++.+.
T Consensus 118 ~~l~KP~~~~~L~~~ 132 (146)
T 3ilh_A 118 YYVSKPLTANALNNL 132 (146)
T ss_dssp EEECSSCCHHHHHHH
T ss_pred eeeeCCCCHHHHHHH
Confidence 999999999877653
No 109
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=64.66 E-value=34 Score=25.24 Aligned_cols=25 Identities=24% Similarity=0.243 Sum_probs=21.6
Q ss_pred HHHHHhhcccCeEEEecCCHHHHHH
Q 018935 174 IFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 174 ~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
....+++.|+++++.+|-+++++.+
T Consensus 93 ~~~~~~~~g~~~~l~kP~~~~~l~~ 117 (132)
T 3lte_A 93 KLQQAVTEGADDYLEKPFDNDALLD 117 (132)
T ss_dssp HHHHHHHHTCCEEECSSCCHHHHHH
T ss_pred HHHHHHHhChHHHhhCCCCHHHHHH
Confidence 5678899999999999999987754
No 110
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=64.62 E-value=28 Score=26.67 Aligned_cols=66 Identities=21% Similarity=0.285 Sum_probs=39.6
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+. .....++..... .+......+++.|++|++.+|-+++++.+.
T Consensus 61 ~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~ 128 (152)
T 3eul_A 61 LPDVALLDYRMPG-MDGAQVAAAVRSYELPTRVLLISAH-DEPAIVYQALQQGAAGFLLKDSTRTEIVKA 128 (152)
T ss_dssp CCSEEEEETTCSS-SCHHHHHHHHHHTTCSCEEEEEESC-CCHHHHHHHHHTTCSEEEETTCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCeEEEEEcc-CCHHHHHHHHHcCCCEEEecCCCHHHHHHH
Confidence 4567777543221 11122333332 224456655544 344566788999999999999999877653
No 111
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=64.61 E-value=41 Score=25.88 Aligned_cols=81 Identities=12% Similarity=0.129 Sum_probs=47.3
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcc-cCeEEEecCC
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQG-LGGIVLKVED 192 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G-~DGVvl~~~d 192 (348)
...+.++.-..... ...+.+|++..-... .--.++..+. .....+|..... .+......+++.| +++++.+|-+
T Consensus 43 ~~~~~~~a~~~l~~-~~~dlvi~D~~l~~~-~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~~l~KP~~ 119 (153)
T 3hv2_A 43 FARDATQALQLLAS-REVDLVISAAHLPQM-DGPTLLARIHQQYPSTTRILLTGD-PDLKLIAKAINEGEIYRYLSKPWD 119 (153)
T ss_dssp EESSHHHHHHHHHH-SCCSEEEEESCCSSS-CHHHHHHHHHHHCTTSEEEEECCC-CCHHHHHHHHHTTCCSEEECSSCC
T ss_pred EECCHHHHHHHHHc-CCCCEEEEeCCCCcC-cHHHHHHHHHhHCCCCeEEEEECC-CCHHHHHHHHhCCCcceEEeCCCC
Confidence 44565553333222 256788885542221 1112333322 234566665554 4445677889999 9999999999
Q ss_pred HHHHHHH
Q 018935 193 VKAVLAL 199 (348)
Q Consensus 193 ~~~v~~l 199 (348)
++++...
T Consensus 120 ~~~l~~~ 126 (153)
T 3hv2_A 120 DQELLLA 126 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887654
No 112
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=63.45 E-value=42 Score=24.68 Aligned_cols=81 Identities=14% Similarity=0.148 Sum_probs=48.9
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHH----HHHHHHHhhcccCeEEEe
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSE----AQIFLEALEQGLGGIVLK 189 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~e----A~~al~~LE~G~DGVvl~ 189 (348)
...+.++....... ..+.+|++..-.. ..--.++..+. .....++......++ ++....+++.|+++.+.+
T Consensus 32 ~~~~~~~~~~~~~~--~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~K 108 (135)
T 3eqz_A 32 AFQHPRAFLTLSLN--KQDIIILDLMMPD-MDGIEVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINTFTK 108 (135)
T ss_dssp EESCHHHHTTSCCC--TTEEEEEECCTTT-THHHHHHHHHHHTTCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEES
T ss_pred eecCHHHHHHhhcc--CCCEEEEeCCCCC-CCHHHHHHHHHhCCCCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeCC
Confidence 34666654433322 2567777543221 11222333332 234567777666654 577888999999999999
Q ss_pred cCCHHHHHHH
Q 018935 190 VEDVKAVLAL 199 (348)
Q Consensus 190 ~~d~~~v~~l 199 (348)
|-++.++.+.
T Consensus 109 P~~~~~l~~~ 118 (135)
T 3eqz_A 109 PINTEVLTCF 118 (135)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999877654
No 113
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=63.44 E-value=8.3 Score=34.29 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=27.7
Q ss_pred CCCcEEEEEe-CchhHHHHHHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
.+.+.|++|| .+++.+...++.|+|+|+.+..
T Consensus 208 ~~G~~v~~WTvn~~~~~~~l~~~GVdgIiTD~P 240 (252)
T 3qvq_A 208 AAGYKVLAFTINDESLALKLYNQGLDAVFSDYP 240 (252)
T ss_dssp HTTCEEEEECCCCHHHHHHHHHTTCCEEEESSH
T ss_pred HCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCH
Confidence 4667899999 6799999999999999998653
No 114
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=63.12 E-value=14 Score=32.44 Aligned_cols=114 Identities=11% Similarity=0.068 Sum_probs=59.3
Q ss_pred chhHHHHHHHhCCcEEEEcCcc---------hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccc
Q 018935 59 SKQVMTAAVERGWNTFVFLSEN---------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPA 129 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~---------~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~ 129 (348)
-.+++..+.+.|++.+.+...+ .+..+++.+- -+.++....-+.+.++++.+..
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~----------------~~iPvi~~ggi~~~~~i~~~~~- 94 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL----------------TTLPIIASGGAGKMEHFLEAFL- 94 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGG----------------CCSCEEEESCCCSTHHHHHHHH-
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHh----------------cCCCEEEECCCCCHHHHHHHHH-
Confidence 4678889999999998875422 1222222221 1222222223467777766543
Q ss_pred cCCCCeEEEeCCCC-eeeehhhhhhcccCCC---ceEEEEcCC-------------------HHHHHHHHHHhhcccCeE
Q 018935 130 DGQAENIVIDLPDW-QVIPAENIVASFQGSG---KTVFAISKT-------------------PSEAQIFLEALEQGLGGI 186 (348)
Q Consensus 130 ~~~~~~vvv~~~DW-~iIPlENliA~~q~~~---~~l~a~v~~-------------------~~eA~~al~~LE~G~DGV 186 (348)
. .++.+++-...- ..|+++.+...++..+ .+++..+.. ....+.+..+.+.|++.|
T Consensus 95 ~-Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i 173 (266)
T 2w6r_A 95 A-GADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEI 173 (266)
T ss_dssp H-TCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEE
T ss_pred c-CCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEE
Confidence 2 578888866665 4556566555433322 233222221 122344556678999999
Q ss_pred EEec
Q 018935 187 VLKV 190 (348)
Q Consensus 187 vl~~ 190 (348)
++..
T Consensus 174 ~~t~ 177 (266)
T 2w6r_A 174 LLTS 177 (266)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9864
No 115
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=62.95 E-value=32 Score=25.69 Aligned_cols=66 Identities=8% Similarity=0.124 Sum_probs=41.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC----CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGS----GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~----~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+... ...++...... +......+++.|+++++.+|-+++++.+.
T Consensus 62 ~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~t~~~-~~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 131 (149)
T 1k66_A 62 RPAVILLDLNLPG-TDGREVLQEIKQDEVLKKIPVVIMTTSS-NPKDIEICYSYSISSYIVKPLEIDRLTET 131 (149)
T ss_dssp CCSEEEECSCCSS-SCHHHHHHHHTTSTTGGGSCEEEEESCC-CHHHHHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCcEEEEECCCCC-CCHHHHHHHHHhCcccCCCeEEEEeCCC-CHHHHHHHHHCCCCEEEeCCCCHHHHHHH
Confidence 4577777443222 2223445554432 34566655543 34566778899999999999999887653
No 116
>4e2u_A PHO RADA intein; HINT-fold, unknown function; 1.58A {Pyrococcus horikoshii} PDB: 2lqm_A 4e2t_A*
Probab=62.81 E-value=8 Score=32.89 Aligned_cols=60 Identities=10% Similarity=0.075 Sum_probs=44.8
Q ss_pred eEEEecCCceeeeeeccCC-----------------------CeEEEEc-CCCCeeEEeeeeE-EeeccceeEEEEEECC
Q 018935 282 AYVLVPGGKTCYLSELKSG-----------------------KEVIVVD-QKGRQRTAVVGRV-KIESRPLILVEAKVIK 336 (348)
Q Consensus 282 aYv~~pggkT~YLSEL~aG-----------------------~eVLvVd-~~G~tR~~~VGRv-KIE~RPLlLIeAe~~G 336 (348)
+-|++++|.+.=+.||..+ ++|+.+| .+|+.....|=++ +...+|++-|+.+.+.
T Consensus 10 t~V~l~dG~~~~I~el~~~~~~~~~~~g~~~~~~g~~~~~~~~~V~s~d~~~g~~~~~~v~~~~~~~~~~~~~i~t~~G~ 89 (168)
T 4e2u_A 10 TEVYYENDTVPHMESIEEMYSKYASMNGELPFDNGYAVPLDNVFVYTLDIASGEIKKTRASYIYREKVEKLIEIKLSSGY 89 (168)
T ss_dssp CEEEEEETTEEEEEEHHHHHHHHHHHHCCEEETTEEEEECSSEEEEEECTTTCCEEEEECCEEEEEEEEEEEEEEETTSC
T ss_pred CEEEEeCCCEEEHHHHHhhhhhhccccCceeecccccccCCCeEEEEEeCCCCCEEEEEEeEEEEcCCCeEEEEEECCCC
Confidence 4578888888888888773 8999999 7999887766443 4444588888876666
Q ss_pred Eeeee
Q 018935 337 LFTAS 341 (348)
Q Consensus 337 ~~~~~ 341 (348)
.|.+.
T Consensus 90 ~i~~T 94 (168)
T 4e2u_A 90 SLKVT 94 (168)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66543
No 117
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=62.80 E-value=10 Score=33.21 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=17.2
Q ss_pred chhHHHHHHHhCCcEEEEcCc
Q 018935 59 SKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~ 79 (348)
..+.+..+++.|+|.+.+..+
T Consensus 76 ~~~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 76 PSDYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp GGGGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHHcCCCEEEECCC
Confidence 345699999999999988764
No 118
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=62.72 E-value=33 Score=27.09 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=40.9
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCH-HHHHHHHHHhhcccCeEEEecCC
Q 018935 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTP-SEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 117 v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~-~eA~~al~~LE~G~DGVvl~~~d 192 (348)
..+.++.-..... ...|.+|++..-.. ..--.++..+.. ....++...... ++.+....+++.|+++++.+|-+
T Consensus 57 ~~~~~~al~~l~~-~~~dlvilD~~l~~-~~g~~l~~~lr~~~~~~ii~~s~~~~~~~~~~~~~~~~ga~~~l~KP~~ 132 (164)
T 3t8y_A 57 AKDGLEAVEKAIE-LKPDVITMDIEMPN-LNGIEALKLIMKKAPTRVIMVSSLTEEGAAITIEALRNGAVDFITKPHG 132 (164)
T ss_dssp ESSHHHHHHHHHH-HCCSEEEECSSCSS-SCHHHHHHHHHHHSCCEEEEEESSCCTTCHHHHHHHHTTCCEEEECSSS
T ss_pred cCCHHHHHHHhcc-CCCCEEEEeCCCCC-CCHHHHHHHHHhcCCceEEEEecCCccchHHHHHHHHcCcCEEEeCCCC
Confidence 4555543332222 24677888543221 111223333221 124566555533 33567788999999999999998
No 119
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=62.57 E-value=4.2 Score=31.12 Aligned_cols=83 Identities=11% Similarity=0.060 Sum_probs=45.7
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (348)
...+.++.-.........+.+|++..-..-..--.++..+.. ....++......++ .....+++.|+++++.+|-+++
T Consensus 34 ~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~KP~~~~ 112 (140)
T 3h5i_A 34 IALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEP-AVVEKIRSVTAYGYVMKSATEQ 112 (140)
T ss_dssp EESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSC-CCCGGGGGSCEEEEEETTCCHH
T ss_pred EecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCCH-HHHHHHHhCCCcEEEeCCCCHH
Confidence 345554433322221356778885442211122223333221 24456666555433 3456788999999999999998
Q ss_pred HHHHH
Q 018935 195 AVLAL 199 (348)
Q Consensus 195 ~v~~l 199 (348)
++.+.
T Consensus 113 ~l~~~ 117 (140)
T 3h5i_A 113 VLITI 117 (140)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 120
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=62.50 E-value=21 Score=26.49 Aligned_cols=80 Identities=11% Similarity=0.027 Sum_probs=43.8
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
...+.++.-..... ...+.++++..-.. ..--+++..+.. ....++......++.. ..+++.|+++++.+|-
T Consensus 32 ~~~~~~~a~~~l~~-~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~--~~~~~~g~~~~l~KP~ 107 (133)
T 3nhm_A 32 TAADGASGLQQALA-HPPDVLISDVNMDG-MDGYALCGHFRSEPTLKHIPVIFVSGYAPRTE--GPADQPVPDAYLVKPV 107 (133)
T ss_dssp EESSHHHHHHHHHH-SCCSEEEECSSCSS-SCHHHHHHHHHHSTTTTTCCEEEEESCCC-------TTSCCCSEEEESSC
T ss_pred EECCHHHHHHHHhc-CCCCEEEEeCCCCC-CCHHHHHHHHHhCCccCCCCEEEEeCCCcHhH--HHHhhcCCceEEeccC
Confidence 34555543332222 24677777433221 122234444432 2456777766654443 7899999999999999
Q ss_pred CHHHHHHH
Q 018935 192 DVKAVLAL 199 (348)
Q Consensus 192 d~~~v~~l 199 (348)
+++++.+.
T Consensus 108 ~~~~l~~~ 115 (133)
T 3nhm_A 108 KPPVLIAQ 115 (133)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99877653
No 121
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=62.08 E-value=22 Score=30.83 Aligned_cols=28 Identities=7% Similarity=0.020 Sum_probs=21.4
Q ss_pred EEEEEe--CchhHHHHHHHhCCcEEEEcCc
Q 018935 52 RVWIWT--ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 52 ~vWiw~--~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
.+++-. .+.+.+..+++.|+|.+++...
T Consensus 76 pvi~~ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 76 PFTVGGGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp CEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 366632 3567799999999999998764
No 122
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=62.06 E-value=41 Score=25.42 Aligned_cols=66 Identities=9% Similarity=0.132 Sum_probs=40.2
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC-CHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE-DVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~-d~~~v~~l 199 (348)
..+.+|++..-.. ..--.++..+.. ....++...... +......+++.|+++++.+|- +++++.+.
T Consensus 51 ~~dlii~D~~l~~-~~g~~~~~~lr~~~~~~~~pii~~s~~~-~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~ 121 (144)
T 3kht_A 51 KYDLIILDIGLPI-ANGFEVMSAVRKPGANQHTPIVILTDNV-SDDRAKQCMAAGASSVVDKSSNNVTDFYGR 121 (144)
T ss_dssp CCSEEEECTTCGG-GCHHHHHHHHHSSSTTTTCCEEEEETTC-CHHHHHHHHHTTCSEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhcccccCCCEEEEeCCC-CHHHHHHHHHcCCCEEEECCCCcHHHHHHH
Confidence 4577777433211 112234444443 345566655443 335567788999999999999 98877653
No 123
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=61.85 E-value=19 Score=29.12 Aligned_cols=39 Identities=15% Similarity=0.318 Sum_probs=28.8
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
...|+...... +......+++.|+++.+.+|-+++++.+
T Consensus 79 ~~~ii~lt~~~-~~~~~~~a~~~Ga~~~l~KP~~~~~L~~ 117 (184)
T 3rqi_A 79 DARILVLTGYA-SIATAVQAVKDGADNYLAKPANVESILA 117 (184)
T ss_dssp TCEEEEEESSC-CHHHHHHHHHHTCSEEEESSCCHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHhCHHHheeCCCCHHHHHH
Confidence 45666555443 4455678899999999999999987654
No 124
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=61.84 E-value=46 Score=24.72 Aligned_cols=66 Identities=11% Similarity=0.072 Sum_probs=41.7
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+.. ....++......+ ......+++.|+++++.+|-+++++.+.
T Consensus 54 ~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 123 (143)
T 3cnb_A 54 KPDVVMLDLMMVG-MDGFSICHRIKSTPATANIIVIAMTGALT-DDNVSRIVALGAETCFGKPLNFTLLEKT 123 (143)
T ss_dssp CCSEEEEETTCTT-SCHHHHHHHHHTSTTTTTSEEEEEESSCC-HHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEecccCC-CcHHHHHHHHHhCccccCCcEEEEeCCCC-HHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 4677777654222 222234444433 3456776655543 4456788999999999999999877654
No 125
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=61.70 E-value=10 Score=35.68 Aligned_cols=41 Identities=12% Similarity=-0.071 Sum_probs=35.2
Q ss_pred eEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 018935 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (348)
Q Consensus 161 ~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~~ 204 (348)
+|..++.|.+||+.+ ++.|+|.|+|+.-+++++++..+.+.
T Consensus 196 ~I~Vev~t~eea~ea---l~aGaD~I~LDn~~~~~~~~~v~~l~ 236 (284)
T 1qpo_A 196 PCEVEVDSLEQLDAV---LPEKPELILLDNFAVWQTQTAVQRRD 236 (284)
T ss_dssp CEEEEESSHHHHHHH---GGGCCSEEEEETCCHHHHHHHHHHHH
T ss_pred CEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHhh
Confidence 899999999888765 56899999999999999888777654
No 126
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=61.53 E-value=13 Score=32.50 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=54.7
Q ss_pred eeeEEEEEEEEEcCCcceEEEeec----CCCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cCCceeEEE
Q 018935 214 SLMKATVTRVDVAGMGDRVCVDLC----SLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AGPVHAYVL 285 (348)
Q Consensus 214 ~L~~atVt~V~~vGmGdRVCVDtc----sll~~GEGmLVGS~S~glFLVhsEt~es~Yva~RPFRVN----AGaVHaYv~ 285 (348)
...+++|++++.++- |-..+-.. --+.||+=+.+--... .+. ..|||=+- .+-+.=++.
T Consensus 18 ~~~~~~V~~~~~~~~-~~~~~~l~~~~~~~~~pGQ~v~l~~~~~------~~~------~~r~ySi~s~~~~~~~~~~v~ 84 (271)
T 4fk8_A 18 KFDTATVLSVHHWTD-TLFSFTCTRDQALRFNNGEFTMVGLEVD------GKP------LTRAYSIVSPNYEEHLEFFSI 84 (271)
T ss_dssp CEEEEEEEEEEEEET-TEEEEEECCCTTCCCCTTCEEEEEEEET------TEE------EEEEEECCSCTTSSSEEEEEE
T ss_pred cceeEEEEEEEEcCC-CEEEEEEEcCCCCCcCCCCEEEEEccCC------Cce------eeeeEeccCCCCCCcEEEEEE
Confidence 467889999998863 32223221 1234444333211111 111 23444442 233333333
Q ss_pred e-c-CCceeeeeeccCCCeEEEE-cCCCCeeEEeeeeEEeeccceeEE
Q 018935 286 V-P-GGKTCYLSELKSGKEVIVV-DQKGRQRTAVVGRVKIESRPLILV 330 (348)
Q Consensus 286 ~-p-ggkT~YLSEL~aG~eVLvV-d~~G~tR~~~VGRvKIE~RPLlLI 330 (348)
. | |.-|+||.+|+.||+|.+- ...|+...... -..+|++||
T Consensus 85 ~~~~G~~s~~l~~l~~Gd~v~v~~gP~G~~~~~~~----~~~~~~vli 128 (271)
T 4fk8_A 85 KVQNGPLTSRLQHLKVGDPVLIGKKPTGTLVADNL----LPGKTLWML 128 (271)
T ss_dssp CCTTCTTHHHHTTCCTTCEEEEESCCBCSCCGGGB----CCCSEEEEE
T ss_pred EECCCchhhHHhcCCCCCEEEEecCCCcceecCCc----CCCCeEEEE
Confidence 3 4 5679999999999999998 88886532100 135788877
No 127
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=61.53 E-value=20 Score=33.31 Aligned_cols=110 Identities=14% Similarity=0.161 Sum_probs=62.9
Q ss_pred chhHHHHHHHhCCcEEEEcCc-chhh-hhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhh--hccccCCCC
Q 018935 59 SKQVMTAAVERGWNTFVFLSE-NQQL-AIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQ--LQPADGQAE 134 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~-~~e~-~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~--~~~~~~~~~ 134 (348)
+.+++.++.+.|.-+++.... +.+. .+.+..+.... ++++++-+-+.++...+. .+.. ...+
T Consensus 25 ~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~-------------~~p~gvnl~~~~~~~~~~~~~a~~-~g~d 90 (332)
T 2z6i_A 25 DGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLT-------------DKPFGVNIMLLSPFVEDIVDLVIE-EGVK 90 (332)
T ss_dssp CHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHC-------------CSCEEEEECTTSTTHHHHHHHHHH-TTCS
T ss_pred cHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhc-------------CCCEEEEecCCCCCHHHHHHHHHH-CCCC
Confidence 478888899999877875432 2222 11222221100 122332222223321122 2222 3678
Q ss_pred eEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 135 NIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 135 ~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
.|.+.+.. |. .++.++...+..++..+.+.++|+.+ .+.|+|+|++..
T Consensus 91 ~V~~~~g~----p~-~~i~~l~~~g~~v~~~v~~~~~a~~~---~~~GaD~i~v~g 138 (332)
T 2z6i_A 91 VVTTGAGN----PS-KYMERFHEAGIIVIPVVPSVALAKRM---EKIGADAVIAEG 138 (332)
T ss_dssp EEEECSSC----GG-GTHHHHHHTTCEEEEEESSHHHHHHH---HHTTCSCEEEEC
T ss_pred EEEECCCC----hH-HHHHHHHHcCCeEEEEeCCHHHHHHH---HHcCCCEEEEEC
Confidence 88887653 43 45666655677899999999988764 468999999964
No 128
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=61.46 E-value=21 Score=30.33 Aligned_cols=18 Identities=11% Similarity=0.187 Sum_probs=15.1
Q ss_pred hHHHHHHHhCCcEEEEcC
Q 018935 61 QVMTAAVERGWNTFVFLS 78 (348)
Q Consensus 61 ~~vT~ALEsG~~~~v~~~ 78 (348)
+.+..+++.|+|.+.+..
T Consensus 75 ~~i~~~~~~gad~v~vh~ 92 (220)
T 2fli_A 75 RYVEAFAQAGADIMTIHT 92 (220)
T ss_dssp GGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHcCCCEEEEcc
Confidence 356999999999998854
No 129
>1gpp_A Endonuclease PI-SCEI; homing, protein splicing; 1.35A {Saccharomyces cerevisiae} SCOP: b.86.1.2
Probab=61.32 E-value=6.2 Score=36.97 Aligned_cols=32 Identities=25% Similarity=0.492 Sum_probs=26.7
Q ss_pred eEEEecCCceeeeeeccCCCeEEEEcCCCCeeEE
Q 018935 282 AYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTA 315 (348)
Q Consensus 282 aYv~~pggkT~YLSEL~aG~eVLvVd~~G~tR~~ 315 (348)
.=|+|.||..+-..+++.||+||. .||..|.+
T Consensus 16 T~VLMADGS~K~IEdI~vGD~Vmg--~DG~pR~V 47 (237)
T 1gpp_A 16 TNVLMADGSIECIENIEVGNKVMG--KDGRPREV 47 (237)
T ss_dssp CEEEBTTSCEEEGGGCCTTCEEEB--TTSSEEEE
T ss_pred CEEEEeCCCcceeeecccCCEEec--CCCCcceE
Confidence 358999999999999999999987 55666655
No 130
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=61.32 E-value=19 Score=33.19 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=47.1
Q ss_pred cChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 118 STPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 118 ~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
.++.+++++.. ..+|.|++-..+-..--++.++..+..-+-.++..++|.+|++.++ +.|+|-|-+.+.|
T Consensus 123 id~~qv~~A~~--~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~---~~Gad~IGv~~r~ 192 (272)
T 3qja_A 123 VQPYQIHEARA--HGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRAL---KAGAKVIGVNARD 192 (272)
T ss_dssp CSHHHHHHHHH--TTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHTCSEEEEESBC
T ss_pred cCHHHHHHHHH--cCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH---HCCCCEEEECCCc
Confidence 55655555432 3678888744332222356667666555667899999999988765 5699999998654
No 131
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=61.28 E-value=9.5 Score=33.78 Aligned_cols=32 Identities=13% Similarity=0.196 Sum_probs=27.5
Q ss_pred CCCcEEEEEe-CchhHHHHHHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
...+.|++|| .+++.+...++.|+|+|+.+..
T Consensus 194 ~~G~~v~~WTVn~~~~~~~l~~~GVdgIiTD~P 226 (238)
T 3no3_A 194 VLGMTSNVWTVDDPKLMEEMIDMGVDFITTDLP 226 (238)
T ss_dssp HTTCEEEEECCCSHHHHHHHHHHTCSEEEESCH
T ss_pred HCCCEEEEECCCCHHHHHHHHHcCCCEEECCCH
Confidence 4667899999 5789999999999999998653
No 132
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=60.71 E-value=49 Score=24.56 Aligned_cols=40 Identities=15% Similarity=0.258 Sum_probs=29.6
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
...++..... .+......+++.|+++++.+|-++.++.+.
T Consensus 80 ~~~ii~ls~~-~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 119 (140)
T 2qr3_A 80 DLPVVLFTAY-ADIDLAVRGIKEGASDFVVKPWDNQKLLET 119 (140)
T ss_dssp TCCEEEEEEG-GGHHHHHHHHHTTCCEEEEESCCHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHcCchheeeCCCCHHHHHHH
Confidence 4456655544 345667788999999999999999877553
No 133
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=60.61 E-value=17 Score=34.36 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=61.5
Q ss_pred EEEeCchhHHHHHHHhCCcEEEEcCcchh------hhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhc
Q 018935 54 WIWTESKQVMTAAVERGWNTFVFLSENQQ------LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQ 127 (348)
Q Consensus 54 Wiw~~~K~~vT~ALEsG~~~~v~~~~~~e------~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~ 127 (348)
|.|--.....++-..+.+|-+|+++.+-. ..+++. .++..|+.+..|+.+.+-|+-..-.
T Consensus 23 w~~~l~~~~~~~l~~~~yd~vViD~~~~g~~~~~~t~~~i~--------------~L~~~G~~viaYlSvGe~E~~R~y~ 88 (309)
T 2aam_A 23 WLYQLQNADPVEISSSGFEIAVIDYSKDGSESGEYSPEEIK--------------IMVDAGVVPVAYVNIGQAEDYRFYW 88 (309)
T ss_dssp CEEECSSCCHHHHHTSCCSEEEECSBSSSSGGGBCCHHHHH--------------HHHHTTCEEEEEEESSEEETTSTTC
T ss_pred EEEEeCCCChhhhhhcCCCEEEEcCCcccccccCCCHHHHH--------------HHHhCCCEEEEEEecccccccchhh
Confidence 55553333333333479999999875210 011111 1344588888898888766521111
Q ss_pred cccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHH----HHHHhhcccCeEEEecCCH
Q 018935 128 PADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQI----FLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 128 ~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~----al~~LE~G~DGVvl~~~d~ 193 (348)
...|+.+|-.-|.....+=++.-+.-+.+++==.. +-.++++|.|||-|++=|.
T Consensus 89 ------------~~~w~~~~~~~lg~~n~~W~ge~~vDi~~~~w~~i~~~rl~~~~~kG~DGvflDnvD~ 146 (309)
T 2aam_A 89 ------------KESWYTNTPEWLGEEDPAWPGNYFVKYWYNEWKEIVFSYLDRVIDQGFKGIYLDRIDS 146 (309)
T ss_dssp ------------CTHHHHSCCTTEEEEETTEEEEEEECTTSHHHHHHHHHHHHHHHHTTCSEEEEECTTH
T ss_pred ------------hhccccCCHHHhCccCCCCCCceEEecCCHHHHHHHHHHHHHHHHcCCCeEeecccch
Confidence 11122255555554433333445555555532111 1267789999999998774
No 134
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=60.47 E-value=12 Score=30.92 Aligned_cols=21 Identities=14% Similarity=0.349 Sum_probs=17.8
Q ss_pred CchhHHHHHHHhCCcEEEEcC
Q 018935 58 ESKQVMTAAVERGWNTFVFLS 78 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~ 78 (348)
...+.+..|++.|++.++..+
T Consensus 63 ~~~~~~~~~~~~Ga~~~l~kp 83 (237)
T 3cwo_X 63 GQQAMVIEAIKAGAKDFIVNT 83 (237)
T ss_dssp STHHHHHHHHHTTCCEEEESH
T ss_pred CCHHHHHHHHHCCHHheEeCC
Confidence 347888999999999999765
No 135
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=60.38 E-value=35 Score=29.03 Aligned_cols=81 Identities=10% Similarity=0.107 Sum_probs=46.8
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-..... ...|.++++..-+. ..--.++..+.. ....++...... +......+++.|+||.+.+|-++
T Consensus 52 ~~~~~~~al~~~~~-~~~dlvllD~~lp~-~~g~~~~~~lr~~~~~~~ii~lt~~~-~~~~~~~~~~~Ga~~yl~Kp~~~ 128 (250)
T 3r0j_A 52 TATNGAQALDRARE-TRPDAVILDVXMPG-MDGFGVLRRLRADGIDAPALFLTARD-SLQDKIAGLTLGGDDYVTKPFSL 128 (250)
T ss_dssp EESSHHHHHHHHHH-HCCSEEEEESCCSS-SCHHHHHHHHHHTTCCCCEEEEECST-THHHHHHHHTSTTCEEEESSCCH
T ss_pred EECCHHHHHHHHHh-CCCCEEEEeCCCCC-CCHHHHHHHHHhcCCCCCEEEEECCC-CHHHHHHHHHcCCcEEEeCCCCH
Confidence 44565543332222 25688888544222 122234444332 234565554433 44556788999999999999999
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++.+.
T Consensus 129 ~~L~~~ 134 (250)
T 3r0j_A 129 EEVVAR 134 (250)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887653
No 136
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=60.37 E-value=10 Score=33.81 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=27.4
Q ss_pred CCCcEEEEEe-CchhHHHHHHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
...+.|++|| .+++.+...++.|+|+|+.+..
T Consensus 202 ~~G~~V~~WTvn~~~~~~~l~~~GVDgIiTD~P 234 (250)
T 3ks6_A 202 AAGLDFGCWAAHTPSQITKALDLGVKVFTTDRP 234 (250)
T ss_dssp HTTCEEEEECCCSHHHHHHHHHHTCSEEEESCH
T ss_pred HCCCEEEEEeCCCHHHHHHHHHcCCCEEEcCCH
Confidence 4567899999 5789999999999999998653
No 137
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=60.05 E-value=41 Score=29.40 Aligned_cols=105 Identities=14% Similarity=0.098 Sum_probs=60.9
Q ss_pred chhHHHHHHHhCCcEEEEcCcch---hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCe
Q 018935 59 SKQVMTAAVERGWNTFVFLSENQ---QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAEN 135 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~~---e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~ 135 (348)
-.+++.++++.|++.+=++..+. +..+++.+ + +..+++= .+.+.++.+.+.. . .+++
T Consensus 27 ~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~-----~------------~~~~gag-~vl~~d~~~~A~~-~-GAd~ 86 (207)
T 2yw3_A 27 LLGLARVLEEEGVGALEITLRTEKGLEALKALRK-----S------------GLLLGAG-TVRSPKEAEAALE-A-GAAF 86 (207)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTT-----S------------SCEEEEE-SCCSHHHHHHHHH-H-TCSE
T ss_pred HHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhC-----C------------CCEEEeC-eEeeHHHHHHHHH-c-CCCE
Confidence 36789999999999887764332 22222222 1 1222222 2456666554433 2 5788
Q ss_pred EEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 136 IVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 136 vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
++.-..| .|+-..... .+..++-.+.|++|+..+ ++.|+|-|-+-|..
T Consensus 87 v~~~~~d---~~v~~~~~~---~g~~~i~G~~t~~e~~~A---~~~Gad~v~~fpa~ 134 (207)
T 2yw3_A 87 LVSPGLL---EEVAALAQA---RGVPYLPGVLTPTEVERA---LALGLSALKFFPAE 134 (207)
T ss_dssp EEESSCC---HHHHHHHHH---HTCCEEEEECSHHHHHHH---HHTTCCEEEETTTT
T ss_pred EEcCCCC---HHHHHHHHH---hCCCEEecCCCHHHHHHH---HHCCCCEEEEecCc
Confidence 8764333 333333333 233455568999998665 56799999998854
No 138
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=59.55 E-value=28 Score=29.55 Aligned_cols=49 Identities=27% Similarity=0.209 Sum_probs=29.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEE
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL 188 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl 188 (348)
.++.+.+...+. +++.+...+. . ..+-..+.+.+|++. +.+.|+|.|++
T Consensus 94 gad~v~l~~~~~---~~~~~~~~~g-~-~~~~~s~~t~~e~~~---a~~~g~d~v~~ 142 (227)
T 2tps_A 94 KADGIHIGQEDA---NAKEVRAAIG-D-MILGVSAHTMSEVKQ---AEEDGADYVGL 142 (227)
T ss_dssp TCSEEEECTTSS---CHHHHHHHHT-T-SEEEEEECSHHHHHH---HHHHTCSEEEE
T ss_pred CCCEEEECCCcc---CHHHHHHhcC-C-cEEEEecCCHHHHHH---HHhCCCCEEEE
Confidence 567888755443 3444443332 2 233334688888654 45789999996
No 139
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=59.43 E-value=20 Score=30.80 Aligned_cols=69 Identities=13% Similarity=0.041 Sum_probs=39.4
Q ss_pred CCceeEEEecCCc--eeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEEEEECC----------Eeeeeeeee
Q 018935 278 GPVHAYVLVPGGK--TCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEAKVIK----------LFTASSYRM 345 (348)
Q Consensus 278 GaVHaYv~~pggk--T~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIeAe~~G----------~~~~~~~~~ 345 (348)
=|=|.+....+|+ ....+||+.||.|++.+. +..+...|-++.....+-..--..++| .|-++.|-+
T Consensus 100 T~~Hp~~v~~~g~~~w~~A~eLk~GD~v~~~~~-~~~~~~~V~~v~~~~~~~~vy~Ltv~g~Ht~vv~~~~gi~vhn~~~ 178 (186)
T 2jmz_A 100 THDHPVYISKTGEVLEINAEMVKVGDYIYIPKN-NTINLDEVIKVETVDYNGHIYDLTVEDNHTYIAGKNEGFAVSASSG 178 (186)
T ss_dssp CTTCEEEEEETTEEEEEEGGGCCTTSEEEEECS-SSEEEEECCCCCEEEECSCEEEEECTTTSEEEESSTTCEEEECCSS
T ss_pred eCCCEEEEeCCCeEEEEEhhcCCCCCEEEeccc-CCccceEEEEEEEeccCCEEEeeEEcCceeEEecCCCCEEEEcCCC
Confidence 3444444443444 678899999999999874 334444455554443332233334444 455666766
Q ss_pred cc
Q 018935 346 QK 347 (348)
Q Consensus 346 ~~ 347 (348)
|.
T Consensus 179 ~~ 180 (186)
T 2jmz_A 179 TL 180 (186)
T ss_dssp TT
T ss_pred Cc
Confidence 64
No 140
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=59.40 E-value=57 Score=24.95 Aligned_cols=81 Identities=15% Similarity=0.204 Sum_probs=47.5
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcc-cCeEEEecCC
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQG-LGGIVLKVED 192 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G-~DGVvl~~~d 192 (348)
...+.++.-..... ...+.+|++..-.. ..-..++..+. .....++...... +......+++.| +++++.+|-+
T Consensus 36 ~~~~~~~a~~~l~~-~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~~~~~~~~g~~~~~l~kP~~ 112 (154)
T 2rjn_A 36 TFTSPLDALEALKG-TSVQLVISDMRMPE-MGGEVFLEQVAKSYPDIERVVISGYA-DAQATIDAVNRGKISRFLLKPWE 112 (154)
T ss_dssp EESCHHHHHHHHTT-SCCSEEEEESSCSS-SCHHHHHHHHHHHCTTSEEEEEECGG-GHHHHHHHHHTTCCSEEEESSCC
T ss_pred EeCCHHHHHHHHhc-CCCCEEEEecCCCC-CCHHHHHHHHHHhCCCCcEEEEecCC-CHHHHHHHHhccchheeeeCCCC
Confidence 44665553333222 24678888544222 12223333332 2345666655544 456778889998 9999999999
Q ss_pred HHHHHHH
Q 018935 193 VKAVLAL 199 (348)
Q Consensus 193 ~~~v~~l 199 (348)
++++...
T Consensus 113 ~~~L~~~ 119 (154)
T 2rjn_A 113 DEDVFKV 119 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877543
No 141
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=59.24 E-value=51 Score=25.27 Aligned_cols=81 Identities=9% Similarity=0.083 Sum_probs=46.4
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-..... ...+.+|++..-.. ..--.++..+. .....++..... .+......+++.|+++++.+|-++
T Consensus 32 ~~~~~~~a~~~l~~-~~~dliild~~l~~-~~g~~~~~~l~~~~~~~pii~ls~~-~~~~~~~~~~~~g~~~~l~kP~~~ 108 (155)
T 1qkk_A 32 SFASATEALAGLSA-DFAGIVISDIRMPG-MDGLALFRKILALDPDLPMILVTGH-GDIPMAVQAIQDGAYDFIAKPFAA 108 (155)
T ss_dssp EESCHHHHHHTCCT-TCCSEEEEESCCSS-SCHHHHHHHHHHHCTTSCEEEEECG-GGHHHHHHHHHTTCCEEEESSCCH
T ss_pred EECCHHHHHHHHHh-CCCCEEEEeCCCCC-CCHHHHHHHHHhhCCCCCEEEEECC-CChHHHHHHHhcCCCeEEeCCCCH
Confidence 34555543332222 24677777544222 22222333332 234566665544 345567788999999999999998
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++...
T Consensus 109 ~~L~~~ 114 (155)
T 1qkk_A 109 DRLVQS 114 (155)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877543
No 142
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=59.22 E-value=35 Score=24.94 Aligned_cols=66 Identities=14% Similarity=0.072 Sum_probs=40.6
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++.+.+|-+++++.+.
T Consensus 46 ~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~ 115 (127)
T 2jba_A 46 WPDLILLAWMLPG-GSGIQFIKHLRRESMTRDIPVVMLTARG-EEEDRVRGLETGADDCITKPFSPKELVAR 115 (127)
T ss_dssp CCSEEEEESEETT-EEHHHHHHHHHTSTTTTTSCEEEEEETT-HHHHHHTTCCCSCSEEEEESCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHhCcccCCCCEEEEeCCC-CHHHHHHHHhcCCCeEEeCCCCHHHHHHH
Confidence 4577777432111 122234555433 345566555443 34566789999999999999999877543
No 143
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=59.03 E-value=56 Score=24.73 Aligned_cols=66 Identities=11% Similarity=0.193 Sum_probs=38.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+. .....++..... .+......+++.|+++.+.+|-+++++...
T Consensus 48 ~~dlvllD~~l~~-~~g~~l~~~l~~~~~~~~ii~ls~~-~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 115 (137)
T 3cfy_A 48 KPQLIILDLKLPD-MSGEDVLDWINQNDIPTSVIIATAH-GSVDLAVNLIQKGAEDFLEKPINADRLKTS 115 (137)
T ss_dssp CCSEEEECSBCSS-SBHHHHHHHHHHTTCCCEEEEEESS-CCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHhcCCCCCEEEEEec-CcHHHHHHHHHCCccEEEeCCCCHHHHHHH
Confidence 4577777432111 11122333332 223455555443 334566788999999999999999887653
No 144
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=58.60 E-value=19 Score=26.91 Aligned_cols=67 Identities=10% Similarity=0.109 Sum_probs=39.7
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-..-..-..++..+.. ....++......+ ......+++.|+++++.+|-+++++...
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 121 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD-VETFQRAKRVNPFGYLAKPVAADTLHRS 121 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC-HHHHHHHHTTCCSEEEEESCCHHHHHHH
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC-HHHHHHHHhcCCCEEEeCCCCHHHHHHH
Confidence 45777775332211122233333322 2455666555433 4556678899999999999999887553
No 145
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=58.44 E-value=23 Score=26.90 Aligned_cols=67 Identities=13% Similarity=0.211 Sum_probs=39.8
Q ss_pred CCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 131 GQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 131 ~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
...+.+|++..-.. ..--.++..+. .....++..... .+......+++.|+++++.+|-+++++.+.
T Consensus 66 ~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~ii~lt~~-~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~ 134 (146)
T 4dad_A 66 DAFDILMIDGAALD-TAELAAIEKLSRLHPGLTCLLVTTD-ASSQTLLDAMRAGVRDVLRWPLEPRALDDA 134 (146)
T ss_dssp TTCSEEEEECTTCC-HHHHHHHHHHHHHCTTCEEEEEESC-CCHHHHHHHHTTTEEEEEESSCCHHHHHHH
T ss_pred CCCCEEEEeCCCCC-ccHHHHHHHHHHhCCCCcEEEEeCC-CCHHHHHHHHHhCCceeEcCCCCHHHHHHH
Confidence 35677777543221 11112232221 224456655443 344567788999999999999999877654
No 146
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=58.36 E-value=26 Score=31.43 Aligned_cols=108 Identities=15% Similarity=0.018 Sum_probs=59.8
Q ss_pred chhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 59 SKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
-.+++.++++.|++.+=++..+..-.+.+..+..- ++ +..+++= .+.+.++.+.+.. . .+++++.
T Consensus 40 ~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~----------~~--~~~igag-tvl~~d~~~~A~~-a-GAd~v~~ 104 (225)
T 1mxs_A 40 ILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQ----------RP--ELCVGAG-TVLDRSMFAAVEA-A-GAQFVVT 104 (225)
T ss_dssp HHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHH----------CT--TSEEEEE-CCCSHHHHHHHHH-H-TCSSEEC
T ss_pred HHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHh----------Cc--ccEEeeC-eEeeHHHHHHHHH-C-CCCEEEe
Confidence 35789999999999888875432111111112110 00 1222222 2456666444332 3 5788876
Q ss_pred eCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 139 DLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 139 ~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
-..| .|+-..-. ..+..++..+.|++|+.. +++.|+|-|-+-|
T Consensus 105 p~~d---~~v~~~~~---~~g~~~i~G~~t~~e~~~---A~~~Gad~vk~FP 147 (225)
T 1mxs_A 105 PGIT---EDILEAGV---DSEIPLLPGISTPSEIMM---GYALGYRRFKLFP 147 (225)
T ss_dssp SSCC---HHHHHHHH---HCSSCEECEECSHHHHHH---HHTTTCCEEEETT
T ss_pred CCCC---HHHHHHHH---HhCCCEEEeeCCHHHHHH---HHHCCCCEEEEcc
Confidence 4433 22222222 233345556999999754 5689999998877
No 147
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=58.12 E-value=38 Score=29.90 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=0.0
Q ss_pred HHHHHHhCCcEE---EEcCcc------------hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEe----------
Q 018935 63 MTAAVERGWNTF---VFLSEN------------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV---------- 117 (348)
Q Consensus 63 vT~ALEsG~~~~---v~~~~~------------~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v---------- 117 (348)
+..|++.|++.| +..... .+.+++.+-. .++.+
T Consensus 105 v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~----------------------viv~~~~~G~~l~~~ 162 (273)
T 2qjg_A 105 VEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMP----------------------LIAMMYPRGKHIQNE 162 (273)
T ss_dssp HHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCC----------------------EEEEEEECSTTCSCT
T ss_pred HHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCC----------------------EEEEeCCCCcccCCC
Q ss_pred cChhhhhhhccccC--CCCeEEEeC-CCCeeeehhhhhhcccCCCceEEEEcC--CHHHHHH-HHHHhhcccCeEEE
Q 018935 118 STPQELQQLQPADG--QAENIVIDL-PDWQVIPAENIVASFQGSGKTVFAISK--TPSEAQI-FLEALEQGLGGIVL 188 (348)
Q Consensus 118 ~~~ed~e~~~~~~~--~~~~vvv~~-~DW~iIPlENliA~~q~~~~~l~a~v~--~~~eA~~-al~~LE~G~DGVvl 188 (348)
.++++.++++.... .++++.+.. .||.. +..+.+.. +-+......++ +.+++.. +..+++.|+|||.+
T Consensus 163 ~~~~~~~~~a~~a~~~Gad~i~~~~~~~~~~--l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 163 RDPELVAHAARLGAELGADIVKTSYTGDIDS--FRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCCSSHHH--HHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCHhHHHHHHHHHHHcCCCEEEECCCCCHHH--HHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
No 148
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=57.88 E-value=26 Score=31.85 Aligned_cols=117 Identities=14% Similarity=0.108 Sum_probs=61.6
Q ss_pred CchhHHHHHHHhCCcEEEEcCcchh-hhhhccceeeeeeeeecCCccccCC---------CCeeEEEEEecChhhhhhhc
Q 018935 58 ESKQVMTAAVERGWNTFVFLSENQQ-LAIDWSTIALLDPLFIKEGEVYDSG---------DRRVGSIIEVSTPQELQQLQ 127 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~~~e-~~~~l~~i~~i~~l~~~~g~~~~~~---------gk~v~~~~~v~~~ed~e~~~ 127 (348)
.....+..+.+.|+|.+.|..+.-+ ..+-+.. +++. |+.++..+...++. +.+.
T Consensus 80 ~p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~--------------i~~~~~~~~~~~~g~~~gv~l~p~Tp~--~~l~ 143 (237)
T 3cu2_A 80 NQLEVAKAVVANGANLVTLQLEQYHDFALTIEW--------------LAKQKTTYANQVYPVLIGACLCPETPI--SELE 143 (237)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTCTTSHHHHHHH--------------HTTCEEEETTEEEECEEEEEECTTSCG--GGGT
T ss_pred CHHHHHHHHHHcCCCEEEEecCCcccHHHHHHH--------------HHhcccccccccCCceEEEEEeCCChH--HHHH
Confidence 4567899999999999888764211 1111111 2233 55666655444443 3444
Q ss_pred cccCCCCeEEE-----eCCCCeeee--hhhh---hhcccCCC-ceEEEEcCCHHHHHHHHHHhh--cccCeEEEecC
Q 018935 128 PADGQAENIVI-----DLPDWQVIP--AENI---VASFQGSG-KTVFAISKTPSEAQIFLEALE--QGLGGIVLKVE 191 (348)
Q Consensus 128 ~~~~~~~~vvv-----~~~DW~iIP--lENl---iA~~q~~~-~~l~a~v~~~~eA~~al~~LE--~G~DGVvl~~~ 191 (348)
......|++.+ -|..-+.+| +|.| -+..+..+ .-.+.+-.-.. .+.+-.+.+ .|+|+++.-+.
T Consensus 144 ~~l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSa 219 (237)
T 3cu2_A 144 PYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSA 219 (237)
T ss_dssp TTTTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGG
T ss_pred HHhhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeH
Confidence 44456888877 223334454 4432 11111110 12344444332 344556688 89999998643
No 149
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=56.45 E-value=29 Score=28.92 Aligned_cols=71 Identities=13% Similarity=0.162 Sum_probs=42.4
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc------CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ------GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q------~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~~ 204 (348)
..|.+|++..-+.. .--.++..+. +....||.......+......+++.|++++|.+|-+ .-...++.++.
T Consensus 119 ~~dlillD~~lp~~-~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~-~L~~~i~~~l~ 195 (206)
T 3mm4_A 119 PFDYIFMDCQMPEM-DGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLN-QLANVIREIES 195 (206)
T ss_dssp SCSEEEEESCCSSS-CHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCT-THHHHHHHHC-
T ss_pred CCCEEEEcCCCCCC-CHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHH-HHHHHHHHHHh
Confidence 46778885432221 1122333332 245667777766545566778899999999999987 44444455554
No 150
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=56.44 E-value=15 Score=33.91 Aligned_cols=49 Identities=12% Similarity=0.194 Sum_probs=37.3
Q ss_pred hhhhhcccCCCceEEEE-cCCHHH-------HHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 149 ENIVASFQGSGKTVFAI-SKTPSE-------AQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 149 ENliA~~q~~~~~l~a~-v~~~~e-------A~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+|++++..+-+|++- +++.++ ++.+-..++.|||||. ||+|..+.++
T Consensus 218 ~~~V~~ah~~G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIi--TD~P~~l~~~ 274 (292)
T 3mz2_A 218 REVIDMLHERGVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIE--SDRPIEVAEA 274 (292)
T ss_dssp HHHHHHHHHTTBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEE--ESCHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEE--eCCHHHHHHH
Confidence 46888888888788775 566542 5677788999999987 8889876554
No 151
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=56.03 E-value=14 Score=33.30 Aligned_cols=41 Identities=22% Similarity=0.359 Sum_probs=28.6
Q ss_pred CC-ceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEE
Q 018935 288 GG-KTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 288 gg-kT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
+| -|+||.+|+.||+|.+-...|+.-... .. -..+|++||=
T Consensus 131 ~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~--~~-~~~~~~vlIa 172 (314)
T 2rc5_A 131 KGVCSNYMCDLKPGDEVTMTGPSGKKFLLP--NT-DFSGDIMFLA 172 (314)
T ss_dssp BCHHHHHHHTCCTTCEEEEEEEECSSSCCC--SS-CBCSCEEEEE
T ss_pred CcchHHHHhcCCCcCEEEEEeccCCceeCC--CC-CCCCCEEEEE
Confidence 45 699999999999999987777642110 00 1258898883
No 152
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=55.85 E-value=59 Score=30.95 Aligned_cols=115 Identities=10% Similarity=0.100 Sum_probs=62.8
Q ss_pred CchhHHHHHHHhCCcEEEEcC--cchh-hhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 018935 58 ESKQVMTAAVERGWNTFVFLS--ENQQ-LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~--~~~e-~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~ 134 (348)
+..+.+..++|.|+|.+.+.. .+.+ ..+.+..+... .+ +.++.. ..+.+.++.+.+.. ..+|
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~----------~~--~~pviv-~~v~~~~~a~~a~~--~Gad 217 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK----------YP--NLDLIA-GNIVTKEAALDLIS--VGAD 217 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH----------CT--TCEEEE-EEECSHHHHHHHHT--TTCS
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH----------CC--CCeEEE-cCCCcHHHHHHHHh--cCCC
Confidence 346777889999999988732 2211 11111111110 00 222221 25677777555442 3589
Q ss_pred eEEEeC-----------CCCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 135 NIVIDL-----------PDWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 135 ~vvv~~-----------~DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
.+++.. .+|. .| +..+...+...+..||+ -+.+.+++..++. .|+|+|.+-+.
T Consensus 218 ~I~vg~~~G~~~~~~~~~~~g-~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala---~GAd~V~iG~~ 287 (404)
T 1eep_A 218 CLKVGIGPGSICTTRIVAGVG-VPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIA---AGADSVMIGNL 287 (404)
T ss_dssp EEEECSSCSTTSHHHHHHCCC-CCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHH---HTCSEEEECHH
T ss_pred EEEECCCCCcCcCccccCCCC-cchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHH---cCCCHHhhCHH
Confidence 998821 2332 23 22333322334567887 6788888776654 69999998653
No 153
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=55.59 E-value=41 Score=32.75 Aligned_cols=112 Identities=14% Similarity=0.122 Sum_probs=65.2
Q ss_pred CchhHHHHHHHhCCcEEEEcCcc------hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccC
Q 018935 58 ESKQVMTAAVERGWNTFVFLSEN------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADG 131 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~~------~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~ 131 (348)
+..+.+..+++.|+|.+.+...+ .+..+.+.+. .| +.++. ...+.+.++...+.. .
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~---~p------------~~pvi-~g~~~t~e~a~~l~~--~ 298 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD---YP------------DLPVV-AGNVATPEGTEALIK--A 298 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH---CT------------TSCEE-EEEECSHHHHHHHHH--T
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH---CC------------CceEE-eCCcCCHHHHHHHHH--c
Confidence 34778889999999999875432 1222222211 00 12221 135678887655443 3
Q ss_pred CCCeEEEeC-----------CCCeeeeh----hhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 132 QAENIVIDL-----------PDWQVIPA----ENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 132 ~~~~vvv~~-----------~DW~iIPl----ENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
.+|.+++.. .+|. +|. ..+.+.+...+..|++ .+.+.+++..++ ..|+|+|.+-..
T Consensus 299 G~d~I~v~~~~G~~~~~~~~~~~g-~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kal---a~GAd~V~iGr~ 371 (494)
T 1vrd_A 299 GADAVKVGVGPGSICTTRVVAGVG-VPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKAL---AAGAESVMVGSI 371 (494)
T ss_dssp TCSEEEECSSCSTTCHHHHHHCCC-CCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH---HTTCSEEEESHH
T ss_pred CCCEEEEcCCCCccccccccCCCC-ccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHH---HcCCCEEEECHH
Confidence 588888833 1232 333 2333333333567888 788888887665 569999998653
No 154
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=55.48 E-value=28 Score=31.33 Aligned_cols=102 Identities=17% Similarity=0.176 Sum_probs=56.9
Q ss_pred eEEEEEEEEEcCC----cc--eEEEeecC--CCCCCceEEEeccCceEEEEeeccc--cCCCCCCCCeeeecC-------
Q 018935 216 MKATVTRVDVAGM----GD--RVCVDLCS--LMRPGEGLLVGSFARGLFLVHSECL--ESNYIASRPFRVNAG------- 278 (348)
Q Consensus 216 ~~atVt~V~~vGm----Gd--RVCVDtcs--ll~~GEGmLVGS~S~glFLVhsEt~--es~Yva~RPFRVNAG------- 278 (348)
..++|++++.+.- +| ++.++.-. -+.||+=+- ++-... .......|||-+---
T Consensus 38 ~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~----------l~~~~~~~~g~~~~~R~ySi~s~p~~~~~~ 107 (314)
T 1fnb_A 38 YVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVG----------VIPDGEDKNGKPHKLRLYSIASSALGDFGD 107 (314)
T ss_dssp EEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEE----------EECSSBCTTSSBCCCEEEECCSCSSCTTSS
T ss_pred EEEEEEEEEEecCCCCCCcEEEEEEecCCCCCcCCCCEEE----------EecCCCCcCCCcCCceeEecCCCCcccCCC
Confidence 5689999999975 34 44454322 134444222 221111 011234677776432
Q ss_pred --CceeEEEe----------cCC-ceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEE
Q 018935 279 --PVHAYVLV----------PGG-KTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 279 --aVHaYv~~----------pgg-kT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
-++=.|.. ++| -|+||.+|+.||.|.+-...|+.-... .-..+|++||=
T Consensus 108 ~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~----~~~~~~~vlIa 169 (314)
T 1fnb_A 108 AKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLTGPVGKEMLMP----KDPNATIIMLG 169 (314)
T ss_dssp SCEEEEEEECCEEECTTSCEEECHHHHHHHHCCTTCEEEEEEEECSTTCCB----SCTTCEEEEEE
T ss_pred CCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCCCCEEEEEeccCCceeCC----CCCCCCEEEEe
Confidence 23322332 444 499999999999999987777642110 11257888883
No 155
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=55.33 E-value=33 Score=25.35 Aligned_cols=40 Identities=25% Similarity=0.336 Sum_probs=26.9
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecC-CHHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE-DVKAVLAL 199 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~-d~~~v~~l 199 (348)
...++...... +......+++.|+++++.+|- +++++.+.
T Consensus 79 ~~~ii~~t~~~-~~~~~~~~~~~g~~~~l~KP~~~~~~l~~~ 119 (130)
T 3eod_A 79 QTPVLVISATE-NMADIAKALRLGVEDVLLKPVKDLNRLREM 119 (130)
T ss_dssp CCCEEEEECCC-CHHHHHHHHHHCCSEEEESCC---CHHHHH
T ss_pred CCCEEEEEcCC-CHHHHHHHHHcCCCEEEeCCCCcHHHHHHH
Confidence 44566555543 344566788999999999998 77776554
No 156
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=54.98 E-value=49 Score=28.66 Aligned_cols=110 Identities=18% Similarity=0.137 Sum_probs=58.5
Q ss_pred eeeEEEEEEEEEcCCcc-eEEEeecC-----CCCCCceEEEeccCceEEEEeeccccCCCCCC-CCeeeecCCceeEEEe
Q 018935 214 SLMKATVTRVDVAGMGD-RVCVDLCS-----LMRPGEGLLVGSFARGLFLVHSECLESNYIAS-RPFRVNAGPVHAYVLV 286 (348)
Q Consensus 214 ~L~~atVt~V~~vGmGd-RVCVDtcs-----ll~~GEGmLVGS~S~glFLVhsEt~es~Yva~-RPFRVNAGaVHaYv~~ 286 (348)
...+++|++++.+.-+= ++.+..-. -+.||+=+.|--... .+....||..+ -|= +.|-++=.|..
T Consensus 11 ~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~------g~~~~R~ySi~s~~~--~~~~~~l~vk~ 82 (270)
T 2cnd_A 11 GRIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIE------GKLCMRAYTPTSMVD--EIGHFDLLVKV 82 (270)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEET------TEEEEEEECCCSCTT--CCSEEEEEEEC
T ss_pred ceEEEEEEEEEEeCCCeEEEEEECCCCccccCCCCCCEEEEEeeeC------CcEEEEeeccCCCcc--CCCEEEEEEEE
Confidence 34678999998886532 34444321 245666443311101 11122344221 120 13455555554
Q ss_pred ----------c-CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEe-----eccceeEEE
Q 018935 287 ----------P-GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKI-----ESRPLILVE 331 (348)
Q Consensus 287 ----------p-ggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKI-----E~RPLlLIe 331 (348)
+ |.-|+||.+|+.||+|.+-...|+.....-|.-.+ ..+|++||=
T Consensus 83 ~~~~~~~~~~~~G~~s~~l~~l~~Gd~v~v~gP~G~~~~~~~g~f~l~~~~~~~~~~vlia 143 (270)
T 2cnd_A 83 YFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVINGKQRNARRLAMIC 143 (270)
T ss_dssp CCSSCBTTBTTCCHHHHHHHHCCTTCEEEEEEEECSEECCSSSCEEETTEEECCSEEEEEE
T ss_pred eccCcccccCCCCchhhHHhcCCCCCEEEEECCcccceeccccceeccCCcccCCEEEEEe
Confidence 2 44799999999999999988888632100011222 357888873
No 157
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=54.93 E-value=27 Score=26.72 Aligned_cols=82 Identities=20% Similarity=0.252 Sum_probs=43.0
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-.........+.+|++..-.. ..--.++..+. .....++..... .+......+++.|++|++.+|-++
T Consensus 34 ~~~~~~~a~~~l~~~~~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~-~~~~~~~~~~~~g~~~~l~kp~~~ 111 (154)
T 2qsj_A 34 GAETVSDALAFLEADNTVDLILLDVNLPD-AEAIDGLVRLKRFDPSNAVALISGE-TDHELIRAALEAGADGFIPKSADP 111 (154)
T ss_dssp EESSHHHHHHHHHTTCCCSEEEECC-------CHHHHHHHHHHCTTSEEEEC------CHHHHHHHHTTCCBBCCTTSCH
T ss_pred EecCHHHHHHHHhccCCCCEEEEeCCCCC-CchHHHHHHHHHhCCCCeEEEEeCC-CCHHHHHHHHHccCCEEEeCCCCH
Confidence 34565553333322134677777432111 11122333332 224566655544 445677789999999999999999
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++.+.
T Consensus 112 ~~L~~~ 117 (154)
T 2qsj_A 112 QVLIHA 117 (154)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887554
No 158
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=54.88 E-value=13 Score=33.31 Aligned_cols=31 Identities=13% Similarity=0.303 Sum_probs=26.4
Q ss_pred CCcEEEEEe-CchhHHHHHHHhCCcEEEEcCc
Q 018935 49 KPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 49 ~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
..|.|.+|| .+++.+...++.|+|+|+.+..
T Consensus 223 lg~~V~~WTvn~~~~~~~l~~~GVDgIiTD~P 254 (285)
T 1xx1_A 223 FINKIYYWSVDKVSTTKAALDVGVDGIMTNYP 254 (285)
T ss_dssp CCCEEEEECCCSHHHHHHHHHHTCSEEEESCH
T ss_pred CCCeEEEeeCCCHHHHHHHHhcCCCEEEeCCH
Confidence 345899999 6789999999999999998754
No 159
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=54.70 E-value=61 Score=23.80 Aligned_cols=80 Identities=11% Similarity=0.172 Sum_probs=44.9
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 018935 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (348)
Q Consensus 117 v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (348)
..+.++.-..... ...+.++++..-+. ..--.++..+. .....++..... .+......+++.|++|.+.+|-+++
T Consensus 33 ~~~~~~~~~~~~~-~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~-~~~~~~~~~~~~ga~~~l~Kp~~~~ 109 (126)
T 1dbw_A 33 HQSAEAFLAFAPD-VRNGVLVTDLRMPD-MSGVELLRNLGDLKINIPSIVITGH-GDVPMAVEAMKAGAVDFIEKPFEDT 109 (126)
T ss_dssp ESCHHHHHHHGGG-CCSEEEEEECCSTT-SCHHHHHHHHHHTTCCCCEEEEECT-TCHHHHHHHHHTTCSEEEESSCCHH
T ss_pred eCCHHHHHHHHhc-CCCCEEEEECCCCC-CCHHHHHHHHHhcCCCCCEEEEECC-CCHHHHHHHHHhCHHHheeCCCCHH
Confidence 4555443332221 24566777543221 12223333332 234456655544 3345677889999999999999998
Q ss_pred HHHHH
Q 018935 195 AVLAL 199 (348)
Q Consensus 195 ~v~~l 199 (348)
++.+.
T Consensus 110 ~l~~~ 114 (126)
T 1dbw_A 110 VIIEA 114 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77553
No 160
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=54.69 E-value=33 Score=25.00 Aligned_cols=80 Identities=10% Similarity=0.100 Sum_probs=43.8
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVK 194 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~ 194 (348)
...+.++.-.... ....+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++.+.+|-+++
T Consensus 32 ~~~~~~~a~~~~~-~~~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~ 108 (123)
T 1xhf_A 32 EATDGAEMHQILS-EYDINLVIMDINLPG-KNGLLLARELREQANVALMFLTGRD-NEVDKILGLEIGADDYITKPFNPR 108 (123)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEECSSCSS-SCHHHHHHHHHHHCCCEEEEEESCC-SHHHHHHHHHHTCSEEEESSCCHH
T ss_pred EeCCHHHHHHHHh-cCCCCEEEEcCCCCC-CCHHHHHHHHHhCCCCcEEEEECCC-ChHHHHHHHhcCcceEEeCCCCHH
Confidence 3455544333222 224677777433211 111123333321 245566555443 334567788999999999999998
Q ss_pred HHHH
Q 018935 195 AVLA 198 (348)
Q Consensus 195 ~v~~ 198 (348)
++..
T Consensus 109 ~l~~ 112 (123)
T 1xhf_A 109 ELTI 112 (123)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 161
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=54.48 E-value=9.9 Score=33.83 Aligned_cols=60 Identities=18% Similarity=0.253 Sum_probs=39.1
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 018935 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (348)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~ 201 (348)
.+.+-. +|..+. +.+|++++..+-++++ .+++.++++.+ ++.|+|||+ ||+|+.+.++.+
T Consensus 182 ~~~~~~---~~~~~~-~~~v~~~~~~G~~V~~WTvn~~~~~~~l---~~~GVDgIi--TD~P~~~~~~~~ 242 (250)
T 3ks6_A 182 IHEIGV---HIDTAD-AGLMAQVQAAGLDFGCWAAHTPSQITKA---LDLGVKVFT--TDRPTLAIALRT 242 (250)
T ss_dssp CCEEEE---EGGGCC-HHHHHHHHHTTCEEEEECCCSHHHHHHH---HHHTCSEEE--ESCHHHHHHHHH
T ss_pred CCEEec---chhhCC-HHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHcCCCEEE--cCCHHHHHHHHH
Confidence 444444 344444 4567776666666655 56777776654 578999998 888987766544
No 162
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=54.21 E-value=21 Score=33.36 Aligned_cols=103 Identities=23% Similarity=0.325 Sum_probs=58.0
Q ss_pred eeeEEEEEEEEEcCCcceE--EEeecC---------CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cC
Q 018935 214 SLMKATVTRVDVAGMGDRV--CVDLCS---------LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AG 278 (348)
Q Consensus 214 ~L~~atVt~V~~vGmGdRV--CVDtcs---------ll~~GEGmLVGS~S~glFLVhsEt~es~Yva~RPFRVN----AG 278 (348)
...+++|++++.+. .|-. .+.... -+.||+=+-|- +........|.-.|||=+- .|
T Consensus 148 ~~~~~~V~~~~~~s-~~i~~~~l~~~~~~~~~l~~~~~~pGQ~v~l~--------~~~~~~~~~~~~~R~ySi~s~p~~~ 218 (399)
T 4g1v_A 148 GWKPFEITAKEYVA-SDIVEFTVKPKFGSGIELESLPITPGQYITVN--------THPIRQENQYDALRHYSLCSASTKN 218 (399)
T ss_dssp SCEEEEEEEEEEEE-TTEEEEEEEECTTSCCCGGGCCCCTTCEEEEE--------ECCCSTTCCSCEEEEEEBSCSCCTT
T ss_pred cceEEEEEEEEEcC-CCeEEEEEEcCCCCcCCcCCCCCCCCCEEEEE--------EeCCCCCCccceeeeecccCCCCCC
Confidence 56788999999886 2332 232211 24455533322 1011001123344555552 34
Q ss_pred CceeEEEe-------cCC-ceeee-eeccCCCeEEEEcCCCCeeEEeeeeEEe-----eccceeEEE
Q 018935 279 PVHAYVLV-------PGG-KTCYL-SELKSGKEVIVVDQKGRQRTAVVGRVKI-----ESRPLILVE 331 (348)
Q Consensus 279 aVHaYv~~-------pgg-kT~YL-SEL~aG~eVLvVd~~G~tR~~~VGRvKI-----E~RPLlLIe 331 (348)
.+.=.|.. |+| -|+|| ..++.||+|.+-...|.-. ..- ..+|++||=
T Consensus 219 ~~~i~Vk~~~~~~~~~~G~~S~~L~~~l~~Gd~v~v~gP~G~f~------l~~~~~~~~~~~~vlIa 279 (399)
T 4g1v_A 219 GLRFAVKMEAARENFPAGLVSEYLHKDAKVGDEIKLSAPAGDFA------INKELIHQNEVPLVLLS 279 (399)
T ss_dssp CEEEEEECCCCBTTBCCCHHHHHHHHTCCTTCEEEEEEEECSCC------CCTTTTTCSSSCEEEEE
T ss_pred eEEEEEEeccCCCCCCCCEehhHHHhCCCCCCEEEEEeccccee------eCcccccCCCCCEEEEe
Confidence 45555665 555 69999 5999999999988777632 111 257899884
No 163
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=53.96 E-value=32 Score=32.62 Aligned_cols=96 Identities=17% Similarity=0.255 Sum_probs=64.7
Q ss_pred cCCCCeeEEEEEecChhhhhhhccccCCCCeE--------EEeCCCCeeeehhh-----hhhcccC-CCceEEEEcCCH-
Q 018935 105 DSGDRRVGSIIEVSTPQELQQLQPADGQAENI--------VIDLPDWQVIPAEN-----IVASFQG-SGKTVFAISKTP- 169 (348)
Q Consensus 105 ~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v--------vv~~~DW~iIPlEN-----liA~~q~-~~~~l~a~v~~~- 169 (348)
..+|.++..++.+.++++.+.+... .+|.| +++..+ .|-|. +...++. .+..++..+.|.
T Consensus 14 t~dg~~~~l~~n~~~p~~~~~a~~~--GadgVGL~RtE~l~ld~e~---~p~~~~q~~~~~~~~~~~~~~~v~VR~~d~g 88 (324)
T 2xz9_A 14 TPDGKKVMLAANIGTPKDVASALAN--GAEGVGLFRTEFLYMDRNS---LPSEEEQFEAYKEVVEKMGGRPVTIRTLDIG 88 (324)
T ss_dssp CTTSCEEEEEEEESSGGGHHHHHHT--TCSSEEEECCGGGTSSSSS---CCCHHHHHHHHHHHHHHTTTSCEEEECCCCB
T ss_pred ccCCCEEEEEEECCCHHHHHHHHhC--CCCeEeehhhhhhhccCCC---CCCHHHHHHHHHHHHHHhCCCceEEEeCCCC
Confidence 4568889999999999998776643 34544 664444 55553 2222221 233577777663
Q ss_pred ----------------------------------HHHHHHHHHhhcccCeEEEe-cCCHHHHHHHHHhhcc
Q 018935 170 ----------------------------------SEAQIFLEALEQGLGGIVLK-VEDVKAVLALKEYFDG 205 (348)
Q Consensus 170 ----------------------------------~eA~~al~~LE~G~DGVvl~-~~d~~~v~~l~~~~~~ 205 (348)
.|.+..+.++..|.+||+++ .++++|+++++++++.
T Consensus 89 ~dk~~~~~~~~~E~nP~LG~RgiR~~l~~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~ 159 (324)
T 2xz9_A 89 GDKELPYLDMPKEMNPFLGYRAIRLCLDRPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEE 159 (324)
T ss_dssp GGGCCTTTCCCCCSCGGGSSBTHHHHHHCHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred cchhhhhhccccccCcccccceeeeeccchhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHH
Confidence 24467888999999999885 4578998888887754
No 164
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=53.85 E-value=16 Score=31.75 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=27.0
Q ss_pred CCCcEEEEEe-CchhHHHHHHHhCCcEEEEcC
Q 018935 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLS 78 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~ 78 (348)
.+.+.+|+|+ .+++.+...++.|+|+|+.+.
T Consensus 184 ~~G~~v~~wtvn~~~~~~~l~~~GvdgI~TD~ 215 (224)
T 1vd6_A 184 KRGLFVVAWTVNEEGEARRLLALGLDGLIGDR 215 (224)
T ss_dssp HTTCEEEEECCCCHHHHHHHHHTTCSEEEESC
T ss_pred HCCCEEEEEeCCCHHHHHHHHhcCCCEEEcCC
Confidence 4567899999 688999999999999999765
No 165
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=53.72 E-value=54 Score=27.87 Aligned_cols=114 Identities=24% Similarity=0.223 Sum_probs=63.9
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeee-e-cCCccccCCCCeeEEEEEec-ChhhhhhhccccCCCCeE
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLF-I-KEGEVYDSGDRRVGSIIEVS-TPQELQQLQPADGQAENI 136 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~-~-~~g~~~~~~gk~v~~~~~v~-~~ed~e~~~~~~~~~~~v 136 (348)
.+++..+.+.|++.+.+.. .+..+++.+..-+ |+. . ..+ .++.+ . .+. +.++++.+.. ..++.+
T Consensus 26 ~~~a~~~~~~Ga~~i~~~~--~~~i~~i~~~~~~-pv~~~~~~~--~~~~~----~--~i~~~~~~i~~~~~--~Gad~v 92 (223)
T 1y0e_A 26 SKMALAAYEGGAVGIRANT--KEDILAIKETVDL-PVIGIVKRD--YDHSD----V--FITATSKEVDELIE--SQCEVI 92 (223)
T ss_dssp HHHHHHHHHHTCSEEEEES--HHHHHHHHHHCCS-CEEEECBCC--CTTCC----C--CBSCSHHHHHHHHH--HTCSEE
T ss_pred HHHHHHHHHCCCeeeccCC--HHHHHHHHHhcCC-CEEeeeccC--CCccc----c--ccCCcHHHHHHHHh--CCCCEE
Confidence 5788888999999987753 3444444333211 211 0 000 00001 1 112 3344443322 257888
Q ss_pred EEeCCCCee--eehhhhhhcccCC--CceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 018935 137 VIDLPDWQV--IPAENIVASFQGS--GKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (348)
Q Consensus 137 vv~~~DW~i--IPlENliA~~q~~--~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (348)
.+....-.- .+++.++..+... +..++..+.+.+|++. +.+.|+|.|.+.
T Consensus 93 ~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~---~~~~G~d~i~~~ 146 (223)
T 1y0e_A 93 ALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKN---AARLGFDYIGTT 146 (223)
T ss_dssp EEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHH---HHHTTCSEEECT
T ss_pred EEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHH---HHHcCCCEEEeC
Confidence 886654211 3456666665443 5567888999999765 678999998764
No 166
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=53.51 E-value=1.3e+02 Score=27.35 Aligned_cols=110 Identities=10% Similarity=0.003 Sum_probs=59.6
Q ss_pred EEEEeCchhHHHHHHHhCCcEE-EEcC---c-----------chhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEe
Q 018935 53 VWIWTESKQVMTAAVERGWNTF-VFLS---E-----------NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEV 117 (348)
Q Consensus 53 vWiw~~~K~~vT~ALEsG~~~~-v~~~---~-----------~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v 117 (348)
+..+....+++..+.+.|++.+ ++.+ . +.+.++++.+. -+.+ ..+.+
T Consensus 24 ~i~~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~----------------~~iP--v~~k~ 85 (305)
T 2nv1_A 24 VIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA----------------VSIP--VMAKA 85 (305)
T ss_dssp EEEEESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH----------------CSSC--EEEEE
T ss_pred eeecCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh----------------CCCC--EEecc
Confidence 4456677899999999999999 5531 0 12222222111 1111 12233
Q ss_pred cC--hhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcc--cCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 018935 118 ST--PQELQQLQPADGQAENIVIDLPDWQVIPAENIVASF--QGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (348)
Q Consensus 118 ~~--~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~--q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (348)
.. .++.+.+.. ..++.|+ ...+ +|.+.+...+ +.-+..++..+.+.+||..+ ++.|+|-|.+.
T Consensus 86 r~g~~~~~~~~~a--~GAd~V~-~~~~---l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a---~~~Gad~V~~~ 152 (305)
T 2nv1_A 86 RIGHIVEARVLEA--MGVDYID-ESEV---LTPADEEFHLNKNEYTVPFVCGCRDLGEATRR---IAEGASMLRTK 152 (305)
T ss_dssp CTTCHHHHHHHHH--HTCSEEE-ECTT---SCCSCSSCCCCGGGCSSCEEEEESSHHHHHHH---HHTTCSEEEEC
T ss_pred cccchHHHHHHHH--CCCCEEE-Eecc---CCHHHHHHHHHHhccCCcEEEEeCCHHHHHHH---HHCCCCEEEec
Confidence 22 333333222 3567775 2322 2333322221 12345789999999998766 48899998883
No 167
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=53.36 E-value=23 Score=34.35 Aligned_cols=119 Identities=17% Similarity=0.144 Sum_probs=63.9
Q ss_pred CchhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 018935 58 ESKQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vv 137 (348)
..++.+..+++.|+|.+++...+.+...-|..+..+.- .++ +.++. -..+.+.++...+.. ..++.+.
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~-------~~p--~~pvi-~G~v~t~~~a~~~~~--~Gad~I~ 300 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRA-------HFP--NRTLI-AGNIATAEGARALYD--AGVDVVK 300 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHH-------HCS--SSCEE-EEEECSHHHHHHHHH--TTCSEEE
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHH-------HCC--CCcEe-CCCccCHHHHHHHHH--cCCCEEE
Confidence 35788999999999999987521111111111111100 000 11221 335667766544432 3567777
Q ss_pred EeC-----------CCCeeeehh---hhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 138 IDL-----------PDWQVIPAE---NIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 138 v~~-----------~DW~iIPlE---NliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
+.. .+|..-.++ .+.++.+..+..||+ -+++.+|+..++ +.|+|+|++-.-
T Consensus 301 vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal---~~GA~~v~vG~~ 367 (491)
T 1zfj_A 301 VGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKAL---AAGGNAVMLGSM 367 (491)
T ss_dssp ECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHH---HTTCSEEEESTT
T ss_pred ECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHH---HcCCcceeeCHH
Confidence 631 244332233 333322234567887 678998887766 469999998554
No 168
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=53.23 E-value=47 Score=30.89 Aligned_cols=70 Identities=11% Similarity=0.039 Sum_probs=49.9
Q ss_pred cChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 118 STPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 118 ~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
.++.++.++. ...+|.|++....-+-=-++.++.....-+-.++++++|.+|++.+ ++.|+|=|=+...|
T Consensus 130 ~d~~qi~ea~--~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A---~~~ga~iIGinnr~ 199 (272)
T 3tsm_A 130 FDPYQVYEAR--SWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERA---LKLSSRLLGVNNRN 199 (272)
T ss_dssp CSTHHHHHHH--HTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHH---TTSCCSEEEEECBC
T ss_pred CCHHHHHHHH--HcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH---HhcCCCEEEECCCC
Confidence 5666655543 2368888887776543346778777666677899999999998765 57899966666443
No 169
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=53.13 E-value=48 Score=24.30 Aligned_cols=66 Identities=8% Similarity=0.140 Sum_probs=40.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-+. ..-..++..+.. ....++..... .+......+++.|+++.+.+|-+++++.+.
T Consensus 51 ~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 120 (129)
T 1p6q_A 51 PHHLVISDFNMPK-MDGLGLLQAVRANPATKKAAFIILTAQ-GDRALVQKAAALGANNVLAKPFTIEKMKAA 120 (129)
T ss_dssp CCSEEEECSSSCS-SCHHHHHHHHTTCTTSTTCEEEECCSC-CCHHHHHHHHHHTCSCEECCCSSHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHhcCccccCCCEEEEeCC-CCHHHHHHHHHcCCCEEEECCCCHHHHHHH
Confidence 4567777432211 122234555543 23456555444 344566788899999999999999877653
No 170
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=53.02 E-value=30 Score=32.22 Aligned_cols=108 Identities=9% Similarity=0.087 Sum_probs=61.7
Q ss_pred chhHHHHHHHhCCcEEEEcCcc-hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEE
Q 018935 59 SKQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIV 137 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~-~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vv 137 (348)
..+.+..++|.|+|.+.+..++ .+..+.+.. .|.+ ++..+.+.++...+.. ..+|.++
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~-----------------~g~~--v~~~v~s~~~a~~a~~--~GaD~i~ 149 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAGNPTKYIRELKE-----------------NGTK--VIPVVASDSLARMVER--AGADAVI 149 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCCHHHHHHHHH-----------------TTCE--EEEEESSHHHHHHHHH--TTCSCEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCcHHHHHHHHH-----------------cCCc--EEEEcCCHHHHHHHHH--cCCCEEE
Confidence 3688999999999998887543 223322221 1333 3346788877655432 2588999
Q ss_pred EeCC--CCe--eeehhhhhhccc-CCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 138 IDLP--DWQ--VIPAENIVASFQ-GSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 138 v~~~--DW~--iIPlENliA~~q-~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
++.. +-. -+|--+++.++. ..+..|++ -+.|.+++..++ +.|+|||.+-+
T Consensus 150 v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al---~~GA~gV~vGs 206 (326)
T 3bo9_A 150 AEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAF---ALGAEAVQMGT 206 (326)
T ss_dssp EECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH---HHTCSEEEESH
T ss_pred EECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHH---HhCCCEEEech
Confidence 9652 111 122223333321 11334554 356777766555 46999999754
No 171
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=52.96 E-value=33 Score=31.16 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=56.1
Q ss_pred eeEEEEEEEEEcCCcc-eEEEeecC-----CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cCCceeEE
Q 018935 215 LMKATVTRVDVAGMGD-RVCVDLCS-----LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AGPVHAYV 284 (348)
Q Consensus 215 L~~atVt~V~~vGmGd-RVCVDtcs-----ll~~GEGmLVGS~S~glFLVhsEt~es~Yva~RPFRVN----AGaVHaYv 284 (348)
-.+++|++++.+.-+- ++.+..-. -+.||+=+.+- .... -..|||-+- .|-+.=.+
T Consensus 108 ~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~---------~~~~-----~~~R~ySi~s~~~~~~l~~~v 173 (338)
T 1krh_A 108 HFEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVT---------LPGT-----TETRSYSFSSQPGNRLTGFVV 173 (338)
T ss_dssp EEEEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEE---------CTTS-----SCEEEEECCSCTTCSEEEEEE
T ss_pred EEEEEEEEEEEcCCCEEEEEEEeCCCCCCCCcCCCCeEEEE---------cCCC-----CccccccccCCCCCCeEEEEE
Confidence 3578899998886432 33344322 24555533321 1110 123555442 34444445
Q ss_pred Ee-cCC-ceeee-eeccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEE
Q 018935 285 LV-PGG-KTCYL-SELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 285 ~~-pgg-kT~YL-SEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
.. |+| -|+|| +.|+.||+|.+-...|+... .-..+|+++|=
T Consensus 174 k~~~~G~~S~~L~~~l~~Gd~v~v~gP~G~f~~------~~~~~~~vlia 217 (338)
T 1krh_A 174 RNVPQGKMSEYLSVQAKAGDKMSFTGPFGSFYL------RDVKRPVLMLA 217 (338)
T ss_dssp ECCTTCHHHHHHHTTCCTTCEEEEEEEECSCSC------CCCSSCEEEEE
T ss_pred EEcCCCCchhhHhhccCCCCEEEEECCccceEe------CCCCceEEEEE
Confidence 44 544 59999 69999999999988887532 12348898883
No 172
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=52.92 E-value=14 Score=26.75 Aligned_cols=65 Identities=17% Similarity=0.169 Sum_probs=38.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..+.++++..-.. ..--.++..+.. ....++......+ ......+++.|+++.+.+|-+++++..
T Consensus 45 ~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~Kp~~~~~l~~ 110 (121)
T 1zh2_A 45 KPDLIILDLGLPD-GDGIEFIRDLRQWSAVPVIVLSARSE-ESDKIAALDAGADDYLSKPFGIGELQA 110 (121)
T ss_dssp CCSEEEEESEETT-EEHHHHHHHHHTTCCCCEEEEESCCS-HHHHHHHHHHTCSEEEESSCCHHHHHH
T ss_pred CCCEEEEeCCCCC-CcHHHHHHHHHhCCCCcEEEEECCCC-HHHHHHHHhcCCCeEEeCCcCHHHHHH
Confidence 4566777432111 111233443332 2345555554433 345567889999999999999987765
No 173
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=52.76 E-value=15 Score=33.72 Aligned_cols=126 Identities=12% Similarity=0.170 Sum_probs=65.9
Q ss_pred hhHHHHHHHhCCcEEEEcCcch-hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSENQ-QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~-e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
.+.+..+.+.|+|.+.|..+.- +..+.+. .+++.|.+.+..+.-.++. +.+.......|+|++
T Consensus 99 ~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~--------------~ir~~G~k~Gvalnp~Tp~--e~l~~~l~~vD~Vlv 162 (246)
T 3inp_A 99 DALIESFAKAGATSIVFHPEASEHIDRSLQ--------------LIKSFGIQAGLALNPATGI--DCLKYVESNIDRVLI 162 (246)
T ss_dssp HHHHHHHHHHTCSEEEECGGGCSCHHHHHH--------------HHHTTTSEEEEEECTTCCS--GGGTTTGGGCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEccccchhHHHHHH--------------HHHHcCCeEEEEecCCCCH--HHHHHHHhcCCEEEE
Confidence 4578899999999999876521 1111111 1234466666553333322 333333345688876
Q ss_pred eC-----CCCeeee--hhhh---hhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe-----cCCH-HHHHHHH
Q 018935 139 DL-----PDWQVIP--AENI---VASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK-----VEDV-KAVLALK 200 (348)
Q Consensus 139 ~~-----~DW~iIP--lENl---iA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~-----~~d~-~~v~~l~ 200 (348)
-. .+-+.|| ++.| -+... +.+ -.+.+-.-.. .+.+-.+.+.|+|.+|.- .+|+ +.+++++
T Consensus 163 MsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~-~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~ 240 (246)
T 3inp_A 163 MSVNPGFGGQKFIPAMLDKAKEISKWISSTDRD-ILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMR 240 (246)
T ss_dssp ECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSC-CEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred eeecCCCCCcccchHHHHHHHHHHHHHHhcCCC-eeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHH
Confidence 33 2444566 3332 11111 111 2233333332 245667899999999974 4677 4466666
Q ss_pred Hhh
Q 018935 201 EYF 203 (348)
Q Consensus 201 ~~~ 203 (348)
+.+
T Consensus 241 ~~i 243 (246)
T 3inp_A 241 DEL 243 (246)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 174
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=52.66 E-value=28 Score=32.68 Aligned_cols=41 Identities=20% Similarity=0.067 Sum_probs=34.4
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 018935 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (348)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~ 203 (348)
.+|..++.|.+||+.+ ++.|+|.|+|.+-++.++++..+.+
T Consensus 197 ~~IgVev~t~eea~eA---~~aGaD~I~ld~~~~~~~k~av~~v 237 (286)
T 1x1o_A 197 LKVEVEVRSLEELEEA---LEAGADLILLDNFPLEALREAVRRV 237 (286)
T ss_dssp SCEEEEESSHHHHHHH---HHHTCSEEEEESCCHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHH---HHcCCCEEEECCCCHHHHHHHHHHh
Confidence 4788999999998765 4679999999999999988766654
No 175
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=52.13 E-value=15 Score=32.33 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=27.5
Q ss_pred CCCcEEEEEe-CchhHHHHHHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
++.+.||+|+ .+++.+...++.|+|+|+.+..
T Consensus 205 ~~G~~v~~wTvn~~~~~~~l~~~GvdgI~TD~p 237 (247)
T 2otd_A 205 DAGLRILVYTVNKPQHAAELLRWGVDCICTDAI 237 (247)
T ss_dssp HTTCEEEEECCCCHHHHHHHHHHTCSEEEESCT
T ss_pred HCCCEEEEEccCCHHHHHHHHHcCCCEEEeCCH
Confidence 4568899999 6789999999999999998653
No 176
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=51.12 E-value=74 Score=23.73 Aligned_cols=66 Identities=12% Similarity=0.219 Sum_probs=40.4
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. +.--.++..+. .....++......+ ......+++.|++|.+.+|-+++++.+.
T Consensus 49 ~~dlvilD~~lp~-~~g~~~~~~l~~~~~~~~ii~ls~~~~-~~~~~~~~~~ga~~~l~Kp~~~~~L~~~ 116 (133)
T 3b2n_A 49 NPNVVILDIEMPG-MTGLEVLAEIRKKHLNIKVIIVTTFKR-PGYFEKAVVNDVDAYVLKERSIEELVET 116 (133)
T ss_dssp CCSEEEECSSCSS-SCHHHHHHHHHHTTCSCEEEEEESCCC-HHHHHHHHHTTCSEEEETTSCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHHHCCCCcEEEEecCCC-HHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 4577777443221 22223344332 23456666655433 3456788899999999999999887653
No 177
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=51.08 E-value=50 Score=25.33 Aligned_cols=66 Identities=12% Similarity=0.206 Sum_probs=39.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. +.--.++..+.. ....++......+ ...+..+++.|++|.+.+|-+++++.+.
T Consensus 61 ~~dlillD~~lp~-~~g~~l~~~l~~~~~~~~~piiils~~~~-~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 130 (149)
T 1i3c_A 61 RPNLILLDLNLPK-KDGREVLAEIKQNPDLKRIPVVVLTTSHN-EDDVIASYELHVNCYLTKSRNLKDLFKM 130 (149)
T ss_dssp CCSEEEECSCCSS-SCHHHHHHHHHHCTTTTTSCEEEEESCCC-HHHHHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEeCCCCC-CcHHHHHHHHHhCcCcCCCeEEEEECCCC-hHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 4577777433211 122233444332 2345665554433 3446688899999999999999887654
No 178
>1q7h_A Conserved hypothetical protein; structural genomics, MCSG, PSI, PR structure initiative; 2.10A {Thermoplasma acidophilum dsm 1728} SCOP: b.122.1.1 d.17.6.2
Probab=50.85 E-value=11 Score=31.55 Aligned_cols=50 Identities=20% Similarity=0.315 Sum_probs=39.9
Q ss_pred eeeecCCceeE----EEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeec
Q 018935 273 FRVNAGPVHAY----VLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIES 324 (348)
Q Consensus 273 FRVNAGaVHaY----v~~pggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~ 324 (348)
..|+.||+.+. =++|-|=+..=.+.+.||.|.|++.+| +..-+|++..-.
T Consensus 73 v~vd~ga~~~l~~Ga~ll~~GV~~~~~~~~~gd~V~V~~~~g--~~ia~G~~~~ss 126 (153)
T 1q7h_A 73 VTVDEGAEPHILNGSDLFAPGIVSMDDSIRKGDMIFVKSSKG--YFIAVGMAEMDA 126 (153)
T ss_dssp EEECTTTHHHHTTTCCEEGGGEEEECTTCCTTCEEEEEETTS--CEEEEEEESSCH
T ss_pred EEECHhHHHHHHcCCCcCccccCcccCceeCCCEEEEEECCC--CEEEEEEEecCH
Confidence 78999998765 455667788778999999999999977 458888887643
No 179
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=50.68 E-value=29 Score=26.08 Aligned_cols=39 Identities=15% Similarity=0.061 Sum_probs=28.6
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
...++...... +......+++.|+++++.+|-+++++..
T Consensus 87 ~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~~L~~ 125 (135)
T 3snk_A 87 TVPLIAVSDEL-TSEQTRVLVRMNASDWLHKPLDGKELLN 125 (135)
T ss_dssp TCCEEEEESCC-CHHHHHHHHHTTCSEEEESSCCHHHHHH
T ss_pred CCcEEEEeCCC-CHHHHHHHHHcCcHhhccCCCCHHHHHH
Confidence 34566555443 3445677899999999999999987754
No 180
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=50.66 E-value=15 Score=33.77 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=27.7
Q ss_pred CCCcEEEEEe-CchhHHHHHHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
.+-+.|++|| .+++.+...++.|+|+|+.+..
T Consensus 266 ~~Gl~V~~WTVn~~~~~~~l~~~GVDgIiTD~P 298 (313)
T 3l12_A 266 DLGLIVLTWTVNEPEDIRRMATTGVDGIVTDYP 298 (313)
T ss_dssp HTTCEEEEBCCCSHHHHHHHHHHTCSEEEESCH
T ss_pred HCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCH
Confidence 4567899999 6799999999999999998654
No 181
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=50.51 E-value=15 Score=27.20 Aligned_cols=65 Identities=17% Similarity=0.137 Sum_probs=36.2
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..+-++++..-+.. .--.++..+.. .+..++......+ ......+++.|+++.+.+|-+++++.+
T Consensus 46 ~~dlii~D~~~p~~-~g~~~~~~lr~~~~~~ii~~t~~~~-~~~~~~~~~~ga~~~l~KP~~~~~l~~ 111 (120)
T 3f6p_A 46 QPDLILLDIMLPNK-DGVEVCREVRKKYDMPIIMLTAKDS-EIDKVIGLEIGADDYVTKPFSTRELLA 111 (120)
T ss_dssp CCSEEEEETTSTTT-HHHHHHHHHHTTCCSCEEEEEESSC-HHHHHHHHHTTCCEEEEESCCHHHHHH
T ss_pred CCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCEEEEECCCC-hHHHHHHHhCCcceeEcCCCCHHHHHH
Confidence 45667775432211 11123333222 2344554443332 334557889999999999999987754
No 182
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=50.13 E-value=21 Score=30.82 Aligned_cols=104 Identities=15% Similarity=0.052 Sum_probs=56.0
Q ss_pred eeeeeeecCCccccC-CCCeeEEEEEecChhhhhhhccccCCCCeEEEeCCCC---eeeehhhhhhcccC-CCceEEE--
Q 018935 92 LLDPLFIKEGEVYDS-GDRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDW---QVIPAENIVASFQG-SGKTVFA-- 164 (348)
Q Consensus 92 ~i~~l~~~~g~~~~~-~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW---~iIPlENliA~~q~-~~~~l~a-- 164 (348)
.|..|.+.+|..+.. +|+. ..+-...++.++.+.... ..++++-+...|. ..++. .+|.++.. .+..++.
T Consensus 5 iip~id~~~g~~V~~~~g~~-~~~~~~~d~~~~a~~~~~-~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~g 81 (244)
T 2y88_A 5 LLPAVNVVEGRAVRLVQGKA-GSQTEYGSAVDAALGWQR-DGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELSG 81 (244)
T ss_dssp EEEEEEEETTEEEEEETTEE-EEEEEEEEHHHHHHHHHH-TTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEES
T ss_pred EEEEEEeECCEEEEeecccc-ccceecCCHHHHHHHHHH-cCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEEC
Confidence 355577788877753 3322 222223355444333332 3578888865432 22344 55555432 2334444
Q ss_pred EcCCHHHHHHHHHHhhcccCeEEEecC---CHHHHHHHHH
Q 018935 165 ISKTPSEAQIFLEALEQGLGGIVLKVE---DVKAVLALKE 201 (348)
Q Consensus 165 ~v~~~~eA~~al~~LE~G~DGVvl~~~---d~~~v~~l~~ 201 (348)
-+.++++++.+ ++.|+|+|++... +|..+.++.+
T Consensus 82 gi~~~~~~~~~---l~~Gad~V~lg~~~l~~p~~~~~~~~ 118 (244)
T 2y88_A 82 GIRDDESLAAA---LATGCARVNVGTAALENPQWCARVIG 118 (244)
T ss_dssp SCCSHHHHHHH---HHTTCSEEEECHHHHHCHHHHHHHHH
T ss_pred CCCCHHHHHHH---HHcCCCEEEECchHhhChHHHHHHHH
Confidence 35677775555 5679999999985 4444444433
No 183
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=49.81 E-value=49 Score=28.65 Aligned_cols=59 Identities=20% Similarity=0.126 Sum_probs=46.7
Q ss_pred eeee-hhhhhhccc-CCCceEEEEcCCHH-----HHHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 018935 144 QVIP-AENIVASFQ-GSGKTVFAISKTPS-----EAQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (348)
Q Consensus 144 ~iIP-lENliA~~q-~~~~~l~a~v~~~~-----eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~ 203 (348)
.-|| ||.+++.+. +.+..+.-+.++.. -++..+..+++ .+-|++.+-|+..+..+++..
T Consensus 77 ~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~-~~~v~i~Sf~~~~l~~~~~~~ 142 (224)
T 1vd6_A 77 PDLPRLEEVLALKEAFPQAVFNVELKSFPGLGEEAARRLAALLRG-REGVWVSSFDPLALLALRKAA 142 (224)
T ss_dssp TTCCBHHHHHGGGGTCTTCEEEEEECCCTTSHHHHHHHHHHHTTT-CSSEEEEESCHHHHHHHHHHC
T ss_pred CCCCCHHHHHHhhhccCCceEEEEECCCCCccHHHHHHHHHHHhc-CCcEEEEeCCHHHHHHHHHHC
Confidence 3455 999999887 55677889988754 25678888888 888999999999888887754
No 184
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=49.39 E-value=42 Score=25.19 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=45.3
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-..... ...+.+|++. -... .--.++..+. .....++...... +......+++.|+++++.+|-++
T Consensus 33 ~~~~~~~a~~~l~~-~~~dlvi~d~-~~~~-~g~~~~~~l~~~~~~~pii~ls~~~-~~~~~~~~~~~g~~~~l~kP~~~ 108 (142)
T 2qxy_A 33 WAKNEQEAFTFLRR-EKIDLVFVDV-FEGE-ESLNLIRRIREEFPDTKVAVLSAYV-DKDLIINSVKAGAVDYILKPFRL 108 (142)
T ss_dssp EESSHHHHHHHHTT-SCCSEEEEEC-TTTH-HHHHHHHHHHHHCTTCEEEEEESCC-CHHHHHHHHHHTCSCEEESSCCH
T ss_pred EECCHHHHHHHHhc-cCCCEEEEeC-CCCC-cHHHHHHHHHHHCCCCCEEEEECCC-CHHHHHHHHHCCcceeEeCCCCH
Confidence 34555443332222 2567788843 2111 1112333332 2245666665543 34566788999999999999999
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++.+.
T Consensus 109 ~~l~~~ 114 (142)
T 2qxy_A 109 DYLLER 114 (142)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 185
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=49.10 E-value=22 Score=30.48 Aligned_cols=50 Identities=28% Similarity=0.402 Sum_probs=33.3
Q ss_pred CCceeEEEe-c-CCceeeeeeccCCCeEEEE-cCCCCeeEEeeeeEEeeccceeEEE
Q 018935 278 GPVHAYVLV-P-GGKTCYLSELKSGKEVIVV-DQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 278 GaVHaYv~~-p-ggkT~YLSEL~aG~eVLvV-d~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
|-+.=|+.. | |.-|+||.+|+.||+|.+- ...|... .-.. -..+|+++|=
T Consensus 61 ~~l~~~v~~~~~G~~s~~l~~l~~Gd~v~v~~gP~G~f~---l~~~-~~~~~~vlia 113 (248)
T 1fdr_A 61 PDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFV---LDEV-PHCETLWMLA 113 (248)
T ss_dssp SSEEEEEECCTTCSSHHHHHTCCTTCEEEEESSCBCCCS---GGGS-CCCSEEEEEE
T ss_pred CcEEEEEEEeCCCchhhHHHhCCCcCEEEEecCCcceeE---cCCC-CCCceEEEEE
Confidence 555556654 4 5568999999999999998 7777631 0000 0257888873
No 186
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=48.79 E-value=26 Score=34.36 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=35.7
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC-CceEEE-EcCCHHHHHHHHHHhhcccCeEEEe
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGS-GKTVFA-ISKTPSEAQIFLEALEQGLGGIVLK 189 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~-~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~ 189 (348)
..+.++++...-.--.+.++|.++... +..|++ .+.+.++|+.+. +.|+|+|++.
T Consensus 156 GvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~---~aGAD~I~vG 212 (400)
T 3ffs_A 156 GVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELI---ENGADGIKVG 212 (400)
T ss_dssp TCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHH---HTTCSEEEEC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHH---HcCCCEEEEe
Confidence 678888754421111224455555433 567875 899999998754 6799999993
No 187
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=48.55 E-value=48 Score=28.18 Aligned_cols=110 Identities=12% Similarity=0.092 Sum_probs=58.7
Q ss_pred chhHHHHHHHhCCcEEEEcCcc--------hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhcccc
Q 018935 59 SKQVMTAAVERGWNTFVFLSEN--------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPAD 130 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~--------~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~ 130 (348)
..+.+..+++.|+|.+.+.... .+..+.+.+. + .|+.+ .+.+.++++...+. .
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~-------------~--~~~~v--~~~~~t~~e~~~~~--~ 137 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTH-------------A--PNVEI--MADIATVEEAKNAA--R 137 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHH-------------C--TTSEE--EEECSSHHHHHHHH--H
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHh-------------C--CCceE--EecCCCHHHHHHHH--H
Confidence 4567888999999998876432 1222222221 0 03333 34667777655432 2
Q ss_pred CCCCeEEEeCCCCe--------eee-hhhhhhccc-CCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 131 GQAENIVIDLPDWQ--------VIP-AENIVASFQ-GSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 131 ~~~~~vvv~~~DW~--------iIP-lENliA~~q-~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
...+++.+.....+ .-| ++ ++.++. ..+..+++ .+.|.++++.++ +.|+|||++-+.
T Consensus 138 ~G~d~i~~~~~g~t~~~~~~~~~~~~~~-~~~~~~~~~~ipvia~GGI~~~~~~~~~~---~~Gad~v~vG~a 206 (223)
T 1y0e_A 138 LGFDYIGTTLHGYTSYTQGQLLYQNDFQ-FLKDVLQSVDAKVIAEGNVITPDMYKRVM---DLGVHCSVVGGA 206 (223)
T ss_dssp TTCSEEECTTTTSSTTSTTCCTTHHHHH-HHHHHHHHCCSEEEEESSCCSHHHHHHHH---HTTCSEEEECHH
T ss_pred cCCCEEEeCCCcCcCCCCCCCCCcccHH-HHHHHHhhCCCCEEEecCCCCHHHHHHHH---HcCCCEEEEChH
Confidence 24677765321111 111 22 233221 12345665 356777777665 569999998754
No 188
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=48.50 E-value=17 Score=32.24 Aligned_cols=32 Identities=0% Similarity=-0.032 Sum_probs=26.8
Q ss_pred CCCcEEEEEe-CchhHHHH-HHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWT-ESKQVMTA-AVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~-ALEsG~~~~v~~~~ 79 (348)
.+.+.+|+|+ .+++.+.. .++.|+|+|+.+..
T Consensus 192 ~~G~~v~~wTvn~~~~~~~~l~~~GvdgIiTD~p 225 (248)
T 1zcc_A 192 KAGLEIMVYYGGDDMAVHREIATSDVDYINLDRP 225 (248)
T ss_dssp HHTCEEEEECCCCCHHHHHHHHHSSCSEEEESCH
T ss_pred HCCCEEEEECCCCHHHHHHHHHHcCCCEEEECCH
Confidence 4567899999 57888999 99999999998653
No 189
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=48.49 E-value=59 Score=23.47 Aligned_cols=65 Identities=11% Similarity=0.218 Sum_probs=39.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..+.++++..-+. +.--.++..+. .....++......+ ......+++.|+++.+.+|-+++++.+
T Consensus 47 ~~dlil~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~KP~~~~~l~~ 113 (120)
T 1tmy_A 47 KPDIVTMDITMPE-MNGIDAIKEIMKIDPNAKIIVCSAMGQ-QAMVIEAIKAGAKDFIVKPFQPSRVVE 113 (120)
T ss_dssp CCSEEEEECSCGG-GCHHHHHHHHHHHCTTCCEEEEECTTC-HHHHHHHHHTTCCEEEESSCCHHHHHH
T ss_pred CCCEEEEeCCCCC-CcHHHHHHHHHhhCCCCeEEEEeCCCC-HHHHHHHHHhCcceeEeCCCCHHHHHH
Confidence 4677777543221 12223333332 23445665554433 345677889999999999999987754
No 190
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=48.40 E-value=67 Score=27.82 Aligned_cols=107 Identities=11% Similarity=0.176 Sum_probs=57.7
Q ss_pred CchhHHHHHHHhCCcEEEEcCcch---------hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhcc
Q 018935 58 ESKQVMTAAVERGWNTFVFLSENQ---------QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQP 128 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~~~---------e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~ 128 (348)
+..+++..+.+.|+|.+.+...+. +.++++. ..--|+.+.+ -|.++++.+.+..
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~--~~~ipvi~~G---------------gi~~~~~~~~~~~ 93 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS--EFAEHIQIGG---------------GIRSLDYAEKLRK 93 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG--GGGGGEEEES---------------SCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHHHH--hcCCcEEEEC---------------CCCCHHHHHHHHH
Confidence 346788999999999988754221 2222222 1111333332 3577887776544
Q ss_pred ccCCCCeEEEeCCCCeeee----hhhhhhcccCCCceEE--EEcC---------------CHHHHHHHHHHhhcccCeEE
Q 018935 129 ADGQAENIVIDLPDWQVIP----AENIVASFQGSGKTVF--AISK---------------TPSEAQIFLEALEQGLGGIV 187 (348)
Q Consensus 129 ~~~~~~~vvv~~~DW~iIP----lENliA~~q~~~~~l~--a~v~---------------~~~eA~~al~~LE~G~DGVv 187 (348)
. .++.+++-.. .++ ++.+ .++. .+++ ..++ +.. +.+..+.+.|++.|+
T Consensus 94 -~-Gad~V~lg~~---~l~~p~~~~~~-~~~g---~~i~~~~d~~~~~v~~~g~~~~~~~~~~--e~~~~~~~~G~~~i~ 162 (241)
T 1qo2_A 94 -L-GYRRQIVSSK---VLEDPSFLKSL-REID---VEPVFSLDTRGGRVAFKGWLAEEEIDPV--SLLKRLKEYGLEEIV 162 (241)
T ss_dssp -T-TCCEEEECHH---HHHCTTHHHHH-HTTT---CEEEEEEEEETTEECCTTCSSCSCCCHH--HHHHHHHTTTCCEEE
T ss_pred -C-CCCEEEECch---HhhChHHHHHH-HHcC---CcEEEEEEecCCEEEECCceecCCCCHH--HHHHHHHhCCCCEEE
Confidence 3 4788888332 222 3333 3321 2332 2231 333 334556789999999
Q ss_pred EecCC
Q 018935 188 LKVED 192 (348)
Q Consensus 188 l~~~d 192 (348)
+++.+
T Consensus 163 ~t~~~ 167 (241)
T 1qo2_A 163 HTEIE 167 (241)
T ss_dssp EEETT
T ss_pred EEeec
Confidence 97743
No 191
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=48.04 E-value=73 Score=26.00 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=38.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..|.++++..-+..=-+ .++..+. .....++...... +......+++.|++|++.+|-+++++.+.
T Consensus 51 ~~dlvllD~~lp~~~g~-~~~~~lr~~~~~~~ii~ls~~~-~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~ 118 (215)
T 1a04_A 51 DPDLILLDLNMPGMNGL-ETLDKLREKSLSGRIVVFSVSN-HEEDVVTALKRGADGYLLKDMEPEDLLKA 118 (215)
T ss_dssp CCSEEEEETTSTTSCHH-HHHHHHHHSCCCSEEEEEECCC-CHHHHHHHHHTTCSEEEETTCCHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHH-HHHHHHHHhCCCCcEEEEECCC-CHHHHHHHHHcCCcEEEeCCCCHHHHHHH
Confidence 46777775442221111 2233322 2244555554432 34456788899999999999999877553
No 192
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=47.84 E-value=15 Score=32.56 Aligned_cols=50 Identities=18% Similarity=0.201 Sum_probs=32.8
Q ss_pred CeeeehhhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 143 WQVIPAENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 143 W~iIPlENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
+..+. +.+|++++..+-++++ .+++.++++. .++.|+|||+ |++|+.+.+
T Consensus 195 ~~~~~-~~~v~~~~~~G~~v~~WTvn~~~~~~~---l~~~GVdgIi--TD~P~~~~~ 245 (252)
T 3qvq_A 195 QSFFD-VQQVSDIKAAGYKVLAFTINDESLALK---LYNQGLDAVF--SDYPQKIQS 245 (252)
T ss_dssp GGGCC-HHHHHHHHHTTCEEEEECCCCHHHHHH---HHHTTCCEEE--ESSHHHHHH
T ss_pred hhhCC-HHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHcCCCEEE--eCCHHHHHH
Confidence 44444 3566666666656655 4566666554 5679999998 888886654
No 193
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=47.46 E-value=35 Score=29.84 Aligned_cols=98 Identities=18% Similarity=0.183 Sum_probs=57.3
Q ss_pred EEEEEEEEEcCCc-ceEEEeecC---CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee-----cCCceeEEEe-
Q 018935 217 KATVTRVDVAGMG-DRVCVDLCS---LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN-----AGPVHAYVLV- 286 (348)
Q Consensus 217 ~atVt~V~~vGmG-dRVCVDtcs---ll~~GEGmLVGS~S~glFLVhsEt~es~Yva~RPFRVN-----AGaVHaYv~~- 286 (348)
+++|++++.+.-. -|+.+..-. -+.||+=+. ++-.. ......|||-+- .|-+.=.+..
T Consensus 7 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~pGQ~v~----------l~~~~--~~~~~~R~ySi~s~~~~~~~l~~~vk~~ 74 (262)
T 1ep3_B 7 MMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLH----------LAVPN--GAMLLRRPISISSWDKRAKTCTILYRIG 74 (262)
T ss_dssp EEEEEEEEEEETTEEEEEEESGGGGGCCSTTCEEE----------ECCSC--TTCCSCEEEECCEEETTTTEEEEEEECC
T ss_pred ceEEEEEEEecCCEEEEEEEcCcccccCCCCceEE----------EEcCC--CCceeeEEEEeeeecCCCCEEEEEEEEe
Confidence 5788888877532 133333322 234444322 22111 112456777652 3556666666
Q ss_pred -cCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEee--ccceeEEE
Q 018935 287 -PGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIE--SRPLILVE 331 (348)
Q Consensus 287 -pggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE--~RPLlLIe 331 (348)
.|.-|+||..|+.||+|.+-...|+.-. ..-. .+|++||=
T Consensus 75 ~~G~~S~~l~~l~~Gd~v~v~gP~G~~f~-----l~~~~~~~~~llia 117 (262)
T 1ep3_B 75 DETTGTYKLSKLESGAKVDVMGPLGNGFP-----VAEVTSTDKILIIG 117 (262)
T ss_dssp CTTSHHHHHHTCCTTCEEEEEEEESBCCC-----CTTCCTTSEEEEEE
T ss_pred cCCchHHHHhcCCCCCEEEEEcccCCCcc-----CCCccCCCeEEEEE
Confidence 6788999999999999999888776211 1112 57888874
No 194
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=47.08 E-value=40 Score=25.34 Aligned_cols=83 Identities=13% Similarity=0.097 Sum_probs=45.1
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc----CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ----GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q----~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
...+.++.-.........+.+|++..-..-..--.++..+. .....++...... +......+++.|+++++.+|-
T Consensus 34 ~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~KP~ 112 (140)
T 3lua_A 34 EVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSD-NPGYRHAALKFKVSDYILKPY 112 (140)
T ss_dssp EECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCC-CHHHHHHHHHSCCSEEEESSC
T ss_pred EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCC-CHHHHHHHHHcCCCEEEECCC
Confidence 34555543333222134677777332210111122333332 2345666655443 334567788999999999999
Q ss_pred CHHHHHHH
Q 018935 192 DVKAVLAL 199 (348)
Q Consensus 192 d~~~v~~l 199 (348)
++.++.+.
T Consensus 113 ~~~~l~~~ 120 (140)
T 3lua_A 113 PTKRLENS 120 (140)
T ss_dssp CTTHHHHH
T ss_pred CHHHHHHH
Confidence 98877654
No 195
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=47.06 E-value=72 Score=22.97 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=45.0
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-.... ....+.++++..-.. ..--.++.++. .....++......+ ......+++.|+++.+.+|-++
T Consensus 29 ~~~~~~~a~~~~~-~~~~dlil~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~kp~~~ 105 (121)
T 2pl1_A 29 DAEDAKEADYYLN-EHIPDIAIVDLGLPD-EDGLSLIRRWRSNDVSLPILVLTARES-WQDKVEVLSAGADDYVTKPFHI 105 (121)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEECSCCSS-SCHHHHHHHHHHTTCCSCEEEEESCCC-HHHHHHHHHTTCSEEEESSCCH
T ss_pred EeCCHHHHHHHHh-ccCCCEEEEecCCCC-CCHHHHHHHHHhcCCCCCEEEEecCCC-HHHHHHHHHcCccceEECCCCH
Confidence 3455554333222 124577777433221 12223444433 22445666554433 3455788999999999999999
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++...
T Consensus 106 ~~l~~~ 111 (121)
T 2pl1_A 106 EEVMAR 111 (121)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877543
No 196
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=47.04 E-value=51 Score=25.23 Aligned_cols=81 Identities=17% Similarity=0.200 Sum_probs=45.5
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-..... ...+.+|++..-.. ..--.++..+.. ....++......+ ......+++.|++|++.+|-++
T Consensus 36 ~~~~~~~a~~~l~~-~~~dlii~D~~l~~-~~g~~~~~~l~~~~~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~kp~~~ 112 (153)
T 3cz5_A 36 EAADAGEAYRLYRE-TTPDIVVMDLTLPG-PGGIEATRHIRQWDGAARILIFTMHQG-SAFALKAFEAGASGYVTKSSDP 112 (153)
T ss_dssp EESSHHHHHHHHHT-TCCSEEEECSCCSS-SCHHHHHHHHHHHCTTCCEEEEESCCS-HHHHHHHHHTTCSEEEETTSCT
T ss_pred EeCCHHHHHHHHhc-CCCCEEEEecCCCC-CCHHHHHHHHHHhCCCCeEEEEECCCC-HHHHHHHHHCCCcEEEecCCCH
Confidence 34555543332222 24677777433221 122233333322 2445666655433 4566788999999999999998
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++.+.
T Consensus 113 ~~L~~~ 118 (153)
T 3cz5_A 113 AELVQA 118 (153)
T ss_dssp THHHHH
T ss_pred HHHHHH
Confidence 877554
No 197
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=46.98 E-value=15 Score=32.44 Aligned_cols=45 Identities=13% Similarity=0.113 Sum_probs=30.4
Q ss_pred hhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 150 NIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 150 NliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
.+|++++..+-++++ .+++.++++. .++.|+|||+ ||+|+.+.++
T Consensus 187 ~~v~~~~~~G~~v~~WTVn~~~~~~~---l~~~GVdgIi--TD~P~~~~~~ 232 (238)
T 3no3_A 187 DWVKDCKVLGMTSNVWTVDDPKLMEE---MIDMGVDFIT--TDLPEETQKI 232 (238)
T ss_dssp THHHHHHHTTCEEEEECCCSHHHHHH---HHHHTCSEEE--ESCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHH---HHHcCCCEEE--CCCHHHHHHH
Confidence 566666655556544 3566666555 5678999988 7888876543
No 198
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=46.28 E-value=61 Score=24.17 Aligned_cols=66 Identities=8% Similarity=0.092 Sum_probs=39.3
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. +.--.++..+. .....++...... +......+++.|++|.+.+|-+++++.+.
T Consensus 47 ~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 114 (132)
T 3crn_A 47 FFNLALFXIKLPD-MEGTELLEKAHKLRPGMKKIMVTGYA-SLENSVFSLNAGADAYIMKPVNPRDLLEK 114 (132)
T ss_dssp CCSEEEECSBCSS-SBHHHHHHHHHHHCTTSEEEEEESCC-CHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CchHHHHHHHHhhCCCCcEEEEeccc-cHHHHHHHHhccchhhccCCCCHHHHHHH
Confidence 4677777432111 11122333332 2345666655443 34456788999999999999999877543
No 199
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=45.95 E-value=55 Score=24.99 Aligned_cols=40 Identities=10% Similarity=0.095 Sum_probs=28.6
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
...++......+ ......+++.|+++++.+|-+++++.+.
T Consensus 89 ~~pii~~t~~~~-~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 128 (152)
T 3heb_A 89 RSPVVILTTTDD-QREIQRCYDLGANVYITKPVNYENFANA 128 (152)
T ss_dssp TSCEEEEESCCC-HHHHHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred CCCEEEEecCCC-HHHHHHHHHCCCcEEEeCCCCHHHHHHH
Confidence 445665555443 3445678899999999999998876653
No 200
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=45.13 E-value=40 Score=26.25 Aligned_cols=39 Identities=26% Similarity=0.291 Sum_probs=28.7
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
...|+...... +......+++.|+++++.+|-++.++.+
T Consensus 111 ~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~KP~~~~~l~~ 149 (157)
T 3hzh_A 111 NARVIMISALG-KEQLVKDCLIKGAKTFIVKPLDRAKVLQ 149 (157)
T ss_dssp TCCEEEEESCC-CHHHHHHHHHTTCSEEEESSCCHHHHHH
T ss_pred CCcEEEEeccC-cHHHHHHHHHcCCCEEEeCCCCHHHHHH
Confidence 45666655543 3345677899999999999999887754
No 201
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=44.89 E-value=22 Score=34.25 Aligned_cols=30 Identities=17% Similarity=0.395 Sum_probs=26.5
Q ss_pred CcEEEEEe-CchhHHHHHHHhCCcEEEEcCc
Q 018935 50 PKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 50 ~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
-++|++|| .+.+.|...++.|+|+|+.+..
T Consensus 241 i~~V~vWTVNd~~~m~~l~~~GVDGIITD~P 271 (302)
T 3rlg_A 241 INKVYYWTVDKRSTTRDALDAGVDGIMTNYP 271 (302)
T ss_dssp CSEEEEECCCSHHHHHHHHHTTCSEEEESCH
T ss_pred eEEEEEEeCCCHHHHHHHHHcCCCEEECCCH
Confidence 47899999 6889999999999999998654
No 202
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=44.55 E-value=56 Score=32.09 Aligned_cols=113 Identities=13% Similarity=0.094 Sum_probs=64.4
Q ss_pred CchhHHHHHHHhCCcEEEEcCc--ch----hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccC
Q 018935 58 ESKQVMTAAVERGWNTFVFLSE--NQ----QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADG 131 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~--~~----e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~ 131 (348)
+..+.+..++|.|+|.+.+... +. +.++.+.+.. | +.++.. ..+.+.++.+.+.. .
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~---~------------~~pvi~-~~v~t~~~a~~l~~-a- 316 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY---P------------HLQVIG-GNVVTAAQAKNLID-A- 316 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC---T------------TCEEEE-EEECSHHHHHHHHH-H-
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC---C------------CCceEe-cccchHHHHHHHHH-c-
Confidence 3467888899999999988432 11 2233222210 0 222211 25678777555443 2
Q ss_pred CCCeEEEeCC-----------CCe---eeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 132 QAENIVIDLP-----------DWQ---VIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 132 ~~~~vvv~~~-----------DW~---iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
.+|.+++... +|- ...++.+-+..+..+..||+ .+++.+++..++ ..|+|+|.+-..
T Consensus 317 Gad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kal---a~GAd~V~iG~~ 389 (514)
T 1jcn_A 317 GVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKAL---ALGASTVMMGSL 389 (514)
T ss_dssp TCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH---HTTCSEEEESTT
T ss_pred CCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHH---HcCCCeeeECHH
Confidence 5788888220 122 22233333333333456887 788888887665 469999998774
No 203
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=44.24 E-value=71 Score=25.50 Aligned_cols=107 Identities=13% Similarity=0.058 Sum_probs=55.1
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhcc-ceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWS-TIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~-~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
..++....+.|++-++++.+ .+..+.+. .. |.. .......+++.++.+ ....++.+|+
T Consensus 32 ~~la~~L~~~g~~V~vid~~-~~~~~~~~~~~-----------------g~~-~~~~d~~~~~~l~~~--~~~~ad~Vi~ 90 (155)
T 2g1u_A 32 SLIANLASSSGHSVVVVDKN-EYAFHRLNSEF-----------------SGF-TVVGDAAEFETLKEC--GMEKADMVFA 90 (155)
T ss_dssp HHHHHHHHHTTCEEEEEESC-GGGGGGSCTTC-----------------CSE-EEESCTTSHHHHHTT--TGGGCSEEEE
T ss_pred HHHHHHHHhCCCeEEEEECC-HHHHHHHHhcC-----------------CCc-EEEecCCCHHHHHHc--CcccCCEEEE
Confidence 55667777889876666553 33443332 21 110 011111233333322 1335788887
Q ss_pred eCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 139 DLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 139 ~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
...+......=..++.......++++.+++.+..+.+. +.|+| ++.|..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~l~---~~G~~--vi~p~~ 139 (155)
T 2g1u_A 91 FTNDDSTNFFISMNARYMFNVENVIARVYDPEKIKIFE---ENGIK--TICPAV 139 (155)
T ss_dssp CSSCHHHHHHHHHHHHHTSCCSEEEEECSSGGGHHHHH---TTTCE--EECHHH
T ss_pred EeCCcHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHH---HCCCc--EEcHHH
Confidence 65554322111112221133568999999999887533 48999 555553
No 204
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=44.22 E-value=15 Score=32.62 Aligned_cols=32 Identities=16% Similarity=0.355 Sum_probs=27.2
Q ss_pred CCCcEEEEEe-CchhHHHHHHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
.+.+.||+|| .+++.+...++.|+|+|+.+..
T Consensus 209 ~~G~~v~~wTvn~~~~~~~l~~~GvdgIiTD~P 241 (252)
T 2pz0_A 209 KNGVKLFPWTVDRKEDMERMIKAGVDGIITDDP 241 (252)
T ss_dssp HTTCEECCBCCCSHHHHHHHHHHTCSEEEESCH
T ss_pred HCCCEEEEECCCCHHHHHHHHHcCCCEEEcCCH
Confidence 4567899999 6788999999999999998653
No 205
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=44.14 E-value=24 Score=30.59 Aligned_cols=49 Identities=24% Similarity=0.428 Sum_probs=31.8
Q ss_pred CCceeEEEe-cCC-ceeeeeeccCCCeEEEE-cCCCCeeEEeeeeEEe-eccceeEEE
Q 018935 278 GPVHAYVLV-PGG-KTCYLSELKSGKEVIVV-DQKGRQRTAVVGRVKI-ESRPLILVE 331 (348)
Q Consensus 278 GaVHaYv~~-pgg-kT~YLSEL~aG~eVLvV-d~~G~tR~~~VGRvKI-E~RPLlLIe 331 (348)
|-+.-|+.. |+| -|+||..|+.||+|.+- ...|.... - .. ..+|+++|=
T Consensus 61 ~~~~~~i~~~~~G~~s~~l~~l~~Gd~v~v~~gp~G~f~~---~--~~~~~~~~vlia 113 (257)
T 2qdx_A 61 EHLEFFSIKVPDGPLTSRLQHLKEGDELMVSRKPTGTLVH---D--DLLPGKHLYLLS 113 (257)
T ss_dssp SEEEEEEECCTTCTTHHHHTTCCTTCEEEECSCCBCSCCG---G--GBCSCSEEEEEE
T ss_pred CeEEEEEEEeCCCcchhHHHhCCCCCEEEEecCCCCCccC---C--cccCCCeEEEEE
Confidence 445555544 555 59999999999999986 56665311 0 01 147888873
No 206
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=43.92 E-value=50 Score=29.02 Aligned_cols=113 Identities=12% Similarity=0.111 Sum_probs=56.3
Q ss_pred HHHHHHhCCcEEEEcCcc----hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 63 MTAAVERGWNTFVFLSEN----QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 63 vT~ALEsG~~~~v~~~~~----~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
+..+.+.|+|++++.... .+..+++-.. ....|.. .++.|.+.++++++... ..+++-+
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~-------------a~~~Gl~--~iv~v~~~~e~~~~~~~--~~~~i~~ 137 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINK-------------CKNLGLE--TIVCTNNINTSKAVAAL--SPDCIAV 137 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHH-------------HHHHTCE--EEEEESSSHHHHHHTTT--CCSEEEE
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHH-------------HHHCCCe--EEEEeCCchHHHHHHhC--CCCEEEE
Confidence 688999999999995310 1111111111 0111322 44556665554554332 2345545
Q ss_pred eCCCCe---------eee--hhhhhhcccCC--CceEEEE--cCCHHHHHHHHHHhhcccCeEEEe-----cCCHHHH
Q 018935 139 DLPDWQ---------VIP--AENIVASFQGS--GKTVFAI--SKTPSEAQIFLEALEQGLGGIVLK-----VEDVKAV 196 (348)
Q Consensus 139 ~~~DW~---------iIP--lENliA~~q~~--~~~l~a~--v~~~~eA~~al~~LE~G~DGVvl~-----~~d~~~v 196 (348)
+. -|- -.| ++..++.+..- +..+++. +++.++++. ..+.|+||+++- ++|+.++
T Consensus 138 ~~-~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~---~~~~gaDgvlVGsAi~~~~d~~~~ 211 (219)
T 2h6r_A 138 EP-PELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKA---ALDLGAEGVLLASGVVKAKNVEEA 211 (219)
T ss_dssp CC-CC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHH---HHTTTCCCEEESHHHHTCSSHHHH
T ss_pred Ee-ccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHH---HhhCCCCEEEEcHHHhCcccHHHH
Confidence 43 442 112 34444433221 3344433 456666665 467899999974 5666543
No 207
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=43.20 E-value=95 Score=30.04 Aligned_cols=116 Identities=15% Similarity=0.079 Sum_probs=61.0
Q ss_pred CchhHHHHHHHhCCcEEEEcCcc--hh-hhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCC
Q 018935 58 ESKQVMTAAVERGWNTFVFLSEN--QQ-LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAE 134 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~~--~e-~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~ 134 (348)
...+.+..++|.|+|.|.++..+ .+ ..+.+..+....| +.++.. ..|.++++...+.. ..+|
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~------------~~~Vi~-G~V~T~e~A~~a~~--aGaD 164 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLG------------SRCIMA-GNVATYAGADYLAS--CGAD 164 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHT------------TCEEEE-EEECSHHHHHHHHH--TTCS
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcC------------CCeEEE-cCcCCHHHHHHHHH--cCCC
Confidence 35789999999999987775321 11 1111111111000 222211 25788887554432 3688
Q ss_pred eEEEeCC---CCe-------eeehhhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 135 NIVIDLP---DWQ-------VIPAENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 135 ~vvv~~~---DW~-------iIPlENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
.+++... -++ -+|.=..|.+.-.....||+ -+.+..++..+ |+.|+|+|++-+.
T Consensus 165 ~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIAdGGI~~~~di~kA---La~GAd~V~iGr~ 230 (361)
T 3r2g_A 165 IIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIKTSGDIVKA---LAFGADFVMIGGM 230 (361)
T ss_dssp EEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEEESCCCSHHHHHHH---HHTTCSEEEESGG
T ss_pred EEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCCCEEEECCCCCHHHHHHH---HHcCCCEEEEChH
Confidence 9988322 111 14422223322222125776 46677776555 5579999998764
No 208
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=42.87 E-value=39 Score=28.92 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=31.6
Q ss_pred CCCeEEEEc-CCCCeeEEeeeeEEe-e-ccceeEEEEEECCEeeee
Q 018935 299 SGKEVIVVD-QKGRQRTAVVGRVKI-E-SRPLILVEAKVIKLFTAS 341 (348)
Q Consensus 299 aG~eVLvVd-~~G~tR~~~VGRvKI-E-~RPLlLIeAe~~G~~~~~ 341 (348)
.|.+|+.+| .+|+.+...|=++-- . .++|+-|+.+.+-+|.+.
T Consensus 45 ~~~~V~s~d~~~gk~~~~~v~~v~~~~~~~~~~~I~t~~G~~I~~T 90 (185)
T 2lcj_A 45 REIKVYSIDLETGKVVLTDIEDVIKAPATDHLIRFELEDGRSFETT 90 (185)
T ss_dssp SCEEEEEEETTTTEEEEEEEEEEEEEECCSCEEEEEETTSCEEEEC
T ss_pred CCcEEEEEECCCCcEEEEEeeeEEEcCCCceEEEEEECCCCEEEEC
Confidence 467899999 899988887765543 3 577988888766666554
No 209
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=42.62 E-value=23 Score=32.14 Aligned_cols=53 Identities=21% Similarity=0.304 Sum_probs=40.7
Q ss_pred eeeecCCceeEE----EecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeeccce
Q 018935 273 FRVNAGPVHAYV----LVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPL 327 (348)
Q Consensus 273 FRVNAGaVHaYv----~~pggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPL 327 (348)
-.|+.||+.+.. ++|-|=+.+=.+++.||.|.|+|.+|+ .+-+|++..-..-|
T Consensus 78 VvVD~GAv~Al~~GaSLl~pGV~~v~g~F~~GD~V~V~~~~G~--~IAvG~a~~sS~Ei 134 (195)
T 3zv0_C 78 IVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGE--AIAVAIAQMSTVDL 134 (195)
T ss_dssp EEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEECTTCC--EEEEEEESSCHHHH
T ss_pred EEECHHHHHHHhcCCCccCCCcEecCCCcCCCCEEEEEcCCCC--EEEEEEEcCCHHHH
Confidence 467888887642 556677888899999999999999986 57789887654433
No 210
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=42.42 E-value=97 Score=22.57 Aligned_cols=65 Identities=12% Similarity=0.166 Sum_probs=40.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..+.++++..-.. ..--.++..+.. ....++...... +......+++.|+++.+.+|-+++++.+
T Consensus 49 ~~dlvi~D~~l~~-~~g~~l~~~l~~~~~~~~~~ii~~s~~~-~~~~~~~~~~~ga~~~l~KP~~~~~l~~ 117 (128)
T 1jbe_A 49 GYGFVISDWNMPN-MDGLELLKTIRAXXAMSALPVLMVTAEA-KKENIIAAAQAGASGYVVKPFTAATLEE 117 (128)
T ss_dssp CCCEEEEESCCSS-SCHHHHHHHHHC--CCTTCCEEEEESSC-CHHHHHHHHHTTCSEEEESSCCHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhhcccCCCcEEEEecCc-cHHHHHHHHHhCcCceeecCCCHHHHHH
Confidence 4577777544222 222234555443 234566554443 3345678899999999999999987754
No 211
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=42.17 E-value=85 Score=26.37 Aligned_cols=70 Identities=9% Similarity=0.064 Sum_probs=41.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHH-HHHHHHHhhcccCeEEEecC---------CHHHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSE-AQIFLEALEQGLGGIVLKVE---------DVKAVLALKE 201 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~e-A~~al~~LE~G~DGVvl~~~---------d~~~v~~l~~ 201 (348)
.++.+++...... =-++.++..++..+.+++..+.++++ .+.+..+++.|+|.|.+.+. +.+.++++++
T Consensus 77 Gad~v~v~~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~ 155 (211)
T 3f4w_A 77 GADYVTVLGVTDV-LTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLK 155 (211)
T ss_dssp TCSEEEEETTSCH-HHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-hHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHH
Confidence 6788888655310 01355666655545566655433322 24456678899999887653 4555655555
Q ss_pred h
Q 018935 202 Y 202 (348)
Q Consensus 202 ~ 202 (348)
.
T Consensus 156 ~ 156 (211)
T 3f4w_A 156 V 156 (211)
T ss_dssp H
T ss_pred H
Confidence 4
No 212
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=42.07 E-value=16 Score=31.73 Aligned_cols=102 Identities=15% Similarity=0.061 Sum_probs=53.3
Q ss_pred eeeeeeecCCccccCC-CCeeEEEEEecChhhhhhhccccCCCCeEEEeCCCCe---eeehhhhhhcccC-CCceEEEE-
Q 018935 92 LLDPLFIKEGEVYDSG-DRRVGSIIEVSTPQELQQLQPADGQAENIVIDLPDWQ---VIPAENIVASFQG-SGKTVFAI- 165 (348)
Q Consensus 92 ~i~~l~~~~g~~~~~~-gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW~---iIPlENliA~~q~-~~~~l~a~- 165 (348)
.|..|.+.+|..+... |+. ..+-...++.++-+.... ..++++-+...|.. .++. .+|.++.. .+..++..
T Consensus 6 iip~idl~~g~~V~~~~g~~-~~~~~~~d~~~~a~~~~~-~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~g 82 (244)
T 1vzw_A 6 LLPAVDVRDGQAVRLVHGES-GTETSYGSPLEAALAWQR-SGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMDIKVELSG 82 (244)
T ss_dssp EEEEEEEETTEEBC---------CCBCCCHHHHHHHHHH-TTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCSSEEEEES
T ss_pred EEEEEEEECCEEEEeecccc-ccceecCCHHHHHHHHHH-cCCCEEEEecCchhhcCCChH-HHHHHHHHhcCCcEEEEC
Confidence 4555777888777532 211 111112244443333222 36788877655432 2444 55555432 23445553
Q ss_pred -cCCHHHHHHHHHHhhcccCeEEEecCC---HHHHHHH
Q 018935 166 -SKTPSEAQIFLEALEQGLGGIVLKVED---VKAVLAL 199 (348)
Q Consensus 166 -v~~~~eA~~al~~LE~G~DGVvl~~~d---~~~v~~l 199 (348)
+.++++++.+ ++.|+|+|++.+.. |..+.++
T Consensus 83 gI~~~~~~~~~---l~~Gad~V~lg~~~l~~p~~~~~~ 117 (244)
T 1vzw_A 83 GIRDDDTLAAA---LATGCTRVNLGTAALETPEWVAKV 117 (244)
T ss_dssp SCCSHHHHHHH---HHTTCSEEEECHHHHHCHHHHHHH
T ss_pred CcCCHHHHHHH---HHcCCCEEEECchHhhCHHHHHHH
Confidence 5777775555 56799999999864 4444443
No 213
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=41.88 E-value=60 Score=27.94 Aligned_cols=97 Identities=9% Similarity=0.013 Sum_probs=53.2
Q ss_pred hhHHHHHHHhCCcEEEEcCcc---hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 018935 60 KQVMTAAVERGWNTFVFLSEN---QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~---~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v 136 (348)
-+.+..|++.|++.|-+...+ .+..+.+..+ .. .-| +..+ |. ++. .++... .++.+
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~l---~~----------~~~--~~li--vn--d~~-~~A~~~-gadgv 74 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYSERLLTLI---PE----------KYH--RRIV--TH--EHF-YLKEEF-NLMGI 74 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHS---CG----------GGG--GGEE--ES--SCT-THHHHT-TCSEE
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHH---HH----------HhC--CeEE--Ee--CCH-HHHHHc-CCCEE
Confidence 378899999999999988543 1222222222 11 011 1122 22 221 222222 45666
Q ss_pred EEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 137 VIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 137 vv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
-+...|.. ..+ + .+.-+...+.|.+|++.+ . .|+|-|.+.|
T Consensus 75 hl~~~~~~---~~~--~----~~~~ig~s~~t~~e~~~A---~-~GaDyv~~g~ 115 (210)
T 3ceu_A 75 HLNARNPS---EPH--D----YAGHVSCSCHSVEEVKNR---K-HFYDYVFMSP 115 (210)
T ss_dssp ECCSSSCS---CCT--T----CCSEEEEEECSHHHHHTT---G-GGSSEEEECC
T ss_pred EECccccc---ccc--c----cCCEEEEecCCHHHHHHH---h-hCCCEEEECC
Confidence 66444542 211 1 244677888999998766 3 6999998643
No 214
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=41.60 E-value=77 Score=23.08 Aligned_cols=66 Identities=14% Similarity=0.148 Sum_probs=40.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-+. ..--.++..+. .....++...... +......+++.|+++.+.+|-+++++.+.
T Consensus 47 ~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (124)
T 1srr_A 47 RPDLVLLDMKIPG-MDGIEILKRMKVIDENIRVIIMTAYG-ELDMIQESKELGALTHFAKPFDIDEIRDA 114 (124)
T ss_dssp CCSEEEEESCCTT-CCHHHHHHHHHHHCTTCEEEEEESSC-CHHHHHHHHHHTCCCEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHHhCCCCCEEEEEccC-chHHHHHHHhcChHhhccCCCCHHHHHHH
Confidence 4677777543221 12223333332 2345666555443 34556788899999999999999877553
No 215
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=41.13 E-value=34 Score=25.62 Aligned_cols=38 Identities=18% Similarity=0.317 Sum_probs=26.7
Q ss_pred eEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 161 ~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
.++...... +......+++.|++|.+.+|-+++++.+.
T Consensus 85 ~ii~~s~~~-~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 122 (136)
T 1dcf_A 85 LLVALSGNT-DKSTKEKCMSFGLDGVLLKPVSLDNIRDV 122 (136)
T ss_dssp EEEEEESCC-SHHHHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred eEEEEeCCC-CHHHHHHHHHcCCCeEEECCCCHHHHHHH
Confidence 344444333 33455678899999999999999877653
No 216
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=40.77 E-value=41 Score=25.26 Aligned_cols=66 Identities=9% Similarity=0.183 Sum_probs=37.0
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+-++++..-... .--.++..+.. ....++...... +......+++.|+++++.+|-+++++.+.
T Consensus 46 ~~dlvi~D~~l~~~-~g~~~~~~l~~~~~~~~~~ii~~s~~~-~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 115 (140)
T 3n53_A 46 HPDLVILDMDIIGE-NSPNLCLKLKRSKGLKNVPLILLFSSE-HKEAIVNGLHSGADDYLTKPFNRNDLLSR 115 (140)
T ss_dssp CCSEEEEETTC-------CHHHHHHTSTTCTTCCEEEEECC-----CTTTTTTCCCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEeCCCCCC-cHHHHHHHHHcCcccCCCCEEEEecCC-CHHHHHHHHhcCCCeeeeCCCCHHHHHHH
Confidence 46777775432111 11122333222 345566655543 34556778999999999999999877653
No 217
>3d79_A PUA domain, putative uncharacterized protein PH0734; unknown function; 1.73A {Pyrococcus horikoshii}
Probab=40.65 E-value=17 Score=31.53 Aligned_cols=53 Identities=23% Similarity=0.295 Sum_probs=40.2
Q ss_pred CeeeecCCceeE----EEecCCceeeeeeccCCCeEEEEcC-CCCeeEEeeeeEEeeccc
Q 018935 272 PFRVNAGPVHAY----VLVPGGKTCYLSELKSGKEVIVVDQ-KGRQRTAVVGRVKIESRP 326 (348)
Q Consensus 272 PFRVNAGaVHaY----v~~pggkT~YLSEL~aG~eVLvVd~-~G~tR~~~VGRvKIE~RP 326 (348)
-..|+.||+.+- =++|-|-+..=.+++.||.|.|++. +| +..-||++..-..-
T Consensus 96 ~v~vd~gA~~~l~~GasL~~~GV~~~~g~f~~Gd~V~v~~~~~g--~~iavG~~~~ss~e 153 (179)
T 3d79_A 96 RVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVEEKYG--RPLAIGIALMSGKV 153 (179)
T ss_dssp EEEECGGGHHHHHTTCCEEGGGEEEECTTCCTTCEEEEEETTTC--CEEEEEEESSCHHH
T ss_pred EEEECccHHHHHhCCCCcCCCcEEEccCCccCCCEEEEEECCCC--eEEEEEEEEcCHHH
Confidence 367899988652 4556677777789999999999997 55 56889998775443
No 218
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=40.65 E-value=58 Score=30.61 Aligned_cols=131 Identities=11% Similarity=0.163 Sum_probs=63.8
Q ss_pred cEEEEEe--CchhHHHHHHHhCCcEEEEcCcch----hhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecCh----
Q 018935 51 KRVWIWT--ESKQVMTAAVERGWNTFVFLSENQ----QLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTP---- 120 (348)
Q Consensus 51 K~vWiw~--~~K~~vT~ALEsG~~~~v~~~~~~----e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~---- 120 (348)
..-|++. .+.+.+..|..+|+|.++++-||. ++......+.. . +... +..+. ..++.|.+.
T Consensus 45 ~Rs~L~vP~~~p~~~eka~~~gaD~vilDLEDaV~~~~k~~Ar~~l~~--~--l~~~---~~~~~--~~~VRVn~~~t~~ 115 (316)
T 3qll_A 45 TRSWLFTPATRSDRFAKAAENGADVAIIDLEDSVSQADKEQARQKAIS--Y--LSSR---PATSL--PLALRINGLDTRA 115 (316)
T ss_dssp CCEEEEEESCC----------CCSEEEEECSTTSCGGGHHHHHHHHHC----------------C--CEEEECCCTTSHH
T ss_pred ccEEEECCCCCHHHHHHHhhCCCCEEEEeCCCCCCCcCHHHHHHHHHH--H--Hhcc---cccCC--eEEEEECCCCCch
Confidence 4468877 468889999999999999997763 22211111100 0 0000 00122 245555543
Q ss_pred --hhhhhhccccCCCCeEEEeCCCCeeeehhhh---hhcccC--CCceEEEEcCCHHHHHHHHHHhh--cccCeEEEecC
Q 018935 121 --QELQQLQPADGQAENIVIDLPDWQVIPAENI---VASFQG--SGKTVFAISKTPSEAQIFLEALE--QGLGGIVLKVE 191 (348)
Q Consensus 121 --ed~e~~~~~~~~~~~vvv~~~DW~iIPlENl---iA~~q~--~~~~l~a~v~~~~eA~~al~~LE--~G~DGVvl~~~ 191 (348)
+|+..+.......+.+++ +++=-.|++ .+.+.. .+..|++.+.+++=..-+-+++. -|+||+.+-+.
T Consensus 116 ~~~Dl~~~l~~g~~~~gIvl----PKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~ 191 (316)
T 3qll_A 116 GIEDIHALLECGSLPDYLVL----PKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAA 191 (316)
T ss_dssp HHHHHHHHHHSCCCCSEEEE----TTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHH
T ss_pred hHHHHHHHHhCCCCCCEEEe----CCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHH
Confidence 244443321111255555 222223332 233221 24679999999998888888887 39999999888
Q ss_pred CHH
Q 018935 192 DVK 194 (348)
Q Consensus 192 d~~ 194 (348)
|..
T Consensus 192 DL~ 194 (316)
T 3qll_A 192 DMA 194 (316)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 219
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=40.62 E-value=2e+02 Score=25.76 Aligned_cols=113 Identities=12% Similarity=0.022 Sum_probs=63.4
Q ss_pred EEEEEeCchhHHHHHHHhCCcEEEEc----Cc-----------chhhhhhccceeeeeeeeecCCccccCCCCeeEEEEE
Q 018935 52 RVWIWTESKQVMTAAVERGWNTFVFL----SE-----------NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIE 116 (348)
Q Consensus 52 ~vWiw~~~K~~vT~ALEsG~~~~v~~----~~-----------~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~ 116 (348)
-+..+-...+++..+.+.|++.+.+. .+ +.+..+++.+ .-+.++-....
T Consensus 23 ~~i~~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~----------------~~~~Pvi~~~~ 86 (297)
T 2zbt_A 23 GVIMDVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMA----------------AVSIPVMAKVR 86 (297)
T ss_dssp EEEEEESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHT----------------TCSSCEEEEEE
T ss_pred CeeeeechHHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHH----------------hcCCCeEEEec
Confidence 35556677899999999999998652 11 1111222111 11223322233
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccCC--CceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 018935 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQGS--GKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (348)
Q Consensus 117 v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (348)
+.+.++.+.+.. ..++.+...+ + .++..++.++.+. ..-+.+.+.+++|++. +.+.|+|-|.++
T Consensus 87 ~~~~~~~~~~~~--aGad~v~~~~-~---~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~---a~~~Gad~I~v~ 152 (297)
T 2zbt_A 87 IGHFVEAMILEA--IGVDFIDESE-V---LTPADEEHHIDKWKFKVPFVCGARNLGEALR---RIAEGAAMIRTK 152 (297)
T ss_dssp TTCHHHHHHHHH--TTCSEEEEET-T---SCCSCSSCCCCGGGCSSCEEEEESSHHHHHH---HHHTTCSEEEEC
T ss_pred cCCHHHHHHHHH--CCCCEEeeeC-C---CChHHHHHHHHHhCCCceEEeecCCHHHHHH---HHHcCCCEEEEc
Confidence 344455444332 3567773322 1 2334555554432 3456777899999775 478999998765
No 220
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=40.60 E-value=1.1e+02 Score=26.52 Aligned_cols=113 Identities=10% Similarity=0.071 Sum_probs=60.8
Q ss_pred CchhHHHHHHHhCCcEEEEc--Ccc--------hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhc
Q 018935 58 ESKQVMTAAVERGWNTFVFL--SEN--------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQ 127 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~--~~~--------~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~ 127 (348)
.-.+.+..+++.|+|.+=+. ..+ .+.++++.++. .....+-+-+.++++.-..+
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~----------------~~~~~v~lmv~d~~~~i~~~ 83 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT----------------KAYLDCHLMVTNPSDYVEPL 83 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC----------------CSEEEEEEESSCGGGGHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc----------------CCcEEEEEEecCHHHHHHHH
Confidence 34678899999999975333 110 23444443331 12333444566664432222
Q ss_pred cccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEc--CCHHHHHHHHHHhhc--ccCeEEEec
Q 018935 128 PADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAIS--KTPSEAQIFLEALEQ--GLGGIVLKV 190 (348)
Q Consensus 128 ~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v--~~~~eA~~al~~LE~--G~DGVvl~~ 190 (348)
.. ..++.+.+....-. -|++..+.++.+.+-++...+ .+..|+ ....++. |+|-|++.+
T Consensus 84 ~~-agad~v~vH~~~~~-~~~~~~~~~i~~~g~~igv~~~p~t~~e~--~~~~~~~~~~~d~vl~~s 146 (228)
T 1h1y_A 84 AK-AGASGFTFHIEVSR-DNWQELIQSIKAKGMRPGVSLRPGTPVEE--VFPLVEAENPVELVLVMT 146 (228)
T ss_dssp HH-HTCSEEEEEGGGCT-TTHHHHHHHHHHTTCEEEEEECTTSCGGG--GHHHHHSSSCCSEEEEES
T ss_pred HH-cCCCEEEECCCCcc-cHHHHHHHHHHHcCCCEEEEEeCCCCHHH--HHHHHhcCCCCCEEEEEe
Confidence 22 36788888665322 233455666555555666666 333333 2334444 999999844
No 221
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=40.48 E-value=19 Score=26.63 Aligned_cols=67 Identities=12% Similarity=0.048 Sum_probs=40.3
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc----CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ----GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q----~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~ 201 (348)
..+.++++..-.. ..--.++..+. .....++......++.. ...++.|+++++.+|-+++++.+...
T Consensus 47 ~~dlii~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~--~~~~~~g~~~~l~KP~~~~~L~~~i~ 117 (127)
T 3i42_A 47 GYDAVFIDLNLPD-TSGLALVKQLRALPMEKTSKFVAVSGFAKNDL--GKEACELFDFYLEKPIDIASLEPILQ 117 (127)
T ss_dssp CCSEEEEESBCSS-SBHHHHHHHHHHSCCSSCCEEEEEECC-CTTC--CHHHHHHCSEEEESSCCHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhhhccCCCCEEEEECCcchhH--HHHHHHhhHHheeCCCCHHHHHHHHH
Confidence 4567777543221 11122333322 33456777666665544 67889999999999999998765433
No 222
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=40.09 E-value=43 Score=27.18 Aligned_cols=80 Identities=13% Similarity=0.152 Sum_probs=44.4
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-.... ....|.++++..-+.. .--.++..+. .....++......+ ......+++.|++|.+.+|-++
T Consensus 33 ~~~~~~~al~~~~-~~~~dlvl~D~~lp~~-~g~~~~~~l~~~~~~~~ii~ls~~~~-~~~~~~a~~~Ga~~~l~Kp~~~ 109 (208)
T 1yio_A 33 TFDCASTFLEHRR-PEQHGCLVLDMRMPGM-SGIELQEQLTAISDGIPIVFITAHGD-IPMTVRAMKAGAIEFLPKPFEE 109 (208)
T ss_dssp EESSHHHHHHHCC-TTSCEEEEEESCCSSS-CHHHHHHHHHHTTCCCCEEEEESCTT-SCCCHHHHHTTEEEEEESSCCH
T ss_pred EcCCHHHHHHhhh-ccCCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCCEEEEeCCCC-HHHHHHHHHCCCcEEEeCCCCH
Confidence 3455554333222 1245677775432221 1112333332 23455666554433 3455678899999999999999
Q ss_pred HHHHH
Q 018935 194 KAVLA 198 (348)
Q Consensus 194 ~~v~~ 198 (348)
.++.+
T Consensus 110 ~~L~~ 114 (208)
T 1yio_A 110 QALLD 114 (208)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 223
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=40.00 E-value=18 Score=32.04 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=26.8
Q ss_pred CCCcEEEEEe-CchhHHHHHHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~ 79 (348)
++...||+|| .+++.+...++.|+|+|+.+..
T Consensus 234 ~~Gl~v~~wTvn~~~~~~~l~~~GvdgIiTD~P 266 (272)
T 3ch0_A 234 KLGMRVIPWTVNTKEEIETLISLGVDGIITDYP 266 (272)
T ss_dssp HTTCEECCBCCCSHHHHHHHHHHTCSEEEESCG
T ss_pred HcCCEEEEeccCCHHHHHHHHHcCCCEEEeCCH
Confidence 4567899999 6788899999999999998653
No 224
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=39.93 E-value=32 Score=25.96 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=28.3
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
...|+...... +......+++.|++|.+.+|-+++++.+.
T Consensus 81 ~~~ii~lt~~~-~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 120 (133)
T 2r25_B 81 TSPIVALTAFA-DDSNIKECLESGMNGFLSKPIKRPKLKTI 120 (133)
T ss_dssp CSCEEEEESCC-SHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHcCCCEEEeCCCCHHHHHHH
Confidence 34555544433 33456688899999999999999877654
No 225
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=39.85 E-value=18 Score=32.59 Aligned_cols=31 Identities=16% Similarity=-0.055 Sum_probs=27.0
Q ss_pred CCCcEEEEEe-CchhHHHHHHHhCCcEEEEcC
Q 018935 48 SKPKRVWIWT-ESKQVMTAAVERGWNTFVFLS 78 (348)
Q Consensus 48 ~~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~ 78 (348)
.+.+.|++|| .+++.+...++.|+|+|+.+.
T Consensus 239 ~~G~~v~~wTvn~~~~~~~l~~~GVdgIiTD~ 270 (287)
T 2oog_A 239 DLGFIVHPYTVNEKADMLRLNKYGVDGVFTNF 270 (287)
T ss_dssp HTTCEECCBCCCSHHHHHHHHHHTCSEEEESC
T ss_pred HCCCeEEEEeCCCHHHHHHHHHcCCCEEEeCC
Confidence 4567899999 679999999999999999865
No 226
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=39.20 E-value=36 Score=30.34 Aligned_cols=46 Identities=17% Similarity=0.292 Sum_probs=31.4
Q ss_pred hhhhhcccCCCc--eEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 149 ENIVASFQGSGK--TVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 149 ENliA~~q~~~~--~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
+.++.+++..+- +|++ .+++.++++.+ ++.|||||+ |+.|+.+.++
T Consensus 212 ~~~v~~~~~~Glg~~V~~WTvn~~~~~~~l---~~~GVDgIi--TD~P~~~~~~ 260 (285)
T 1xx1_A 212 EAIKSRDSANGFINKIYYWSVDKVSTTKAA---LDVGVDGIM--TNYPNVLIGV 260 (285)
T ss_dssp HHHHHHTSTTCCCCEEEEECCCSHHHHHHH---HHHTCSEEE--ESCHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEeeCCCHHHHHHH---HhcCCCEEE--eCCHHHHHHH
Confidence 456666655444 5555 47888877765 578999998 7888866543
No 227
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=39.19 E-value=40 Score=28.35 Aligned_cols=66 Identities=14% Similarity=0.209 Sum_probs=38.2
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC-CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGS-GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~-~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..|.++++..-... .--.++..+... ...++......+ ......+++.|++|++.+|-+++++.+.
T Consensus 49 ~~dlvilD~~l~~~-~g~~~~~~lr~~~~~~ii~lt~~~~-~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~ 115 (238)
T 2gwr_A 49 RPDLVLLDLMLPGM-NGIDVCRVLRADSGVPIVMLTAKTD-TVDVVLGLESGADDYIMKPFKPKELVAR 115 (238)
T ss_dssp CCSEEEEESSCSSS-CHHHHHHHHHTTCCCCEEEEEETTC-CSCHHHHHHTTCCEEEEESCCHHHHHHH
T ss_pred CCCEEEEeCCCCCC-CHHHHHHHHHhCCCCcEEEEeCCCC-HHHHHHHHHCCCCEEEeCCCCHHHHHHH
Confidence 45777775542221 112233333322 345555443332 2345677899999999999999887654
No 228
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=39.12 E-value=27 Score=29.62 Aligned_cols=20 Identities=15% Similarity=0.052 Sum_probs=16.7
Q ss_pred chhHHHHHHHhCCcEEEEcC
Q 018935 59 SKQVMTAAVERGWNTFVFLS 78 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~ 78 (348)
+.+.+..+++.|+|.+.+..
T Consensus 88 ~~~~~~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 88 SLEDATTLFRAGADKVSVNT 107 (253)
T ss_dssp SHHHHHHHHHHTCSEEEESH
T ss_pred CHHHHHHHHHcCCCEEEECh
Confidence 45677899999999999865
No 229
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=38.54 E-value=68 Score=25.47 Aligned_cols=104 Identities=10% Similarity=-0.052 Sum_probs=56.9
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~ 139 (348)
+.++....+.|.+-++++++..+..+.+.... ..|.. ......++++.++.+ ....++.+|+-
T Consensus 16 ~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~--------------~~~~~-~i~gd~~~~~~l~~a--~i~~ad~vi~~ 78 (153)
T 1id1_A 16 INTILQLNQRGQNVTVISNLPEDDIKQLEQRL--------------GDNAD-VIPGDSNDSSVLKKA--GIDRCRAILAL 78 (153)
T ss_dssp HHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH--------------CTTCE-EEESCTTSHHHHHHH--TTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEECCChHHHHHHHHhh--------------cCCCe-EEEcCCCCHHHHHHc--ChhhCCEEEEe
Confidence 55666667789887777764333332222110 00111 112223455544433 23467888885
Q ss_pred CCCCeeeehhhhhhc----ccCCCceEEEEcCCHHHHHHHHHHhhcccCeEE
Q 018935 140 LPDWQVIPAENIVAS----FQGSGKTVFAISKTPSEAQIFLEALEQGLGGIV 187 (348)
Q Consensus 140 ~~DW~iIPlENliA~----~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVv 187 (348)
..|- -.|+.+. -.....++++.+++.+.++.+ -+.|+|-|+
T Consensus 79 ~~~d----~~n~~~~~~a~~~~~~~~ii~~~~~~~~~~~l---~~~G~~~vi 123 (153)
T 1id1_A 79 SDND----ADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKI---KMVHPDIIL 123 (153)
T ss_dssp SSCH----HHHHHHHHHHHHHTSSSCEEEECSSGGGHHHH---HTTCCSEEE
T ss_pred cCCh----HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH---HHcCCCEEE
Confidence 5543 2344322 112346899999999988765 457999766
No 230
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=38.28 E-value=63 Score=23.85 Aligned_cols=65 Identities=12% Similarity=0.218 Sum_probs=38.2
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC---CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG---SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~---~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..+.++++..-.. ..--.++..++. ....++..... .+......+++.|+++.+.+|-+++++.+
T Consensus 48 ~~dlvllD~~l~~-~~g~~~~~~l~~~~~~~~~ii~ls~~-~~~~~~~~~~~~ga~~~l~KP~~~~~l~~ 115 (130)
T 1dz3_A 48 RPDILLLDIIMPH-LDGLAVLERIRAGFEHQPNVIMLTAF-GQEDVTKKAVELGASYFILKPFDMENLAH 115 (130)
T ss_dssp CCSEEEEESCCSS-SCHHHHHHHHHHHCSSCCEEEEEEET-TCHHHHHHHHHTTCEEEEECSSCCTTHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHhcCCCCCcEEEEecC-CCHHHHHHHHHcCCCEEEeCCCCHHHHHH
Confidence 4577888544221 111223333322 23445544433 33455678899999999999999887654
No 231
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=38.05 E-value=28 Score=29.75 Aligned_cols=100 Identities=15% Similarity=0.183 Sum_probs=56.5
Q ss_pred eeeEEEEEEEEEcCCcc-eEEEeecC-----CCCCCceEEEeccCceEEEEeeccccCCCCCCCCeee-----ecCCcee
Q 018935 214 SLMKATVTRVDVAGMGD-RVCVDLCS-----LMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRV-----NAGPVHA 282 (348)
Q Consensus 214 ~L~~atVt~V~~vGmGd-RVCVDtcs-----ll~~GEGmLVGS~S~glFLVhsEt~es~Yva~RPFRV-----NAGaVHa 282 (348)
...+++|++++.+.-+- ++.+..-. -+.||+=+.+- +..+ .....|||.+ +.|-+.=
T Consensus 10 ~~~~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~--------~~~~----g~~~~R~ysi~s~~~~~~~~~l 77 (243)
T 2eix_A 10 EYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVK--------ATVD----GKEIYRPYTPVSSDDEKGYFDL 77 (243)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEE--------EEET----TEEEEEEECCCSCTTCCSEEEE
T ss_pred ceEEEEEEEEEEeCCCeEEEEEEcCCCCcccCcCCceEEEEE--------EeeC----CCEEEeeeeecCCCCCCCEEEE
Confidence 45688999999887553 34444321 23455533221 1111 0112344443 2344555
Q ss_pred EEEe-c-CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEE
Q 018935 283 YVLV-P-GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILV 330 (348)
Q Consensus 283 Yv~~-p-ggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLI 330 (348)
++.. | |.-|+||+.|+.||+|.+....|+...- .-..+|+++|
T Consensus 78 ~vk~~~~G~~S~~l~~l~~Gd~v~v~gP~G~f~~~-----~~~~~~~vli 122 (243)
T 2eix_A 78 IIKVYEKGQMSQYIDHLNPGDFLQVRGPKGQFDYK-----PNMVKEMGMI 122 (243)
T ss_dssp EEECCTTCHHHHHHHTCCTTCEEEEEEEECSCCCC-----TTSSSEEEEE
T ss_pred EEEEcCCCCcchHhhcCCCCCEEEEECCeEEEEeC-----CCCCcEEEEE
Confidence 5655 3 4479999999999999998877763211 0024677777
No 232
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=37.69 E-value=1.2e+02 Score=24.90 Aligned_cols=10 Identities=50% Similarity=0.776 Sum_probs=8.9
Q ss_pred CCCCCCCeee
Q 018935 266 NYIASRPFRV 275 (348)
Q Consensus 266 ~Yva~RPFRV 275 (348)
=|+|.+||||
T Consensus 7 r~~p~~p~rv 16 (318)
T 4ggc_A 7 RYIPSLPDRI 16 (318)
T ss_dssp CCCCSSCSEE
T ss_pred cccCCCCCEE
Confidence 3899999998
No 233
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=37.37 E-value=45 Score=29.79 Aligned_cols=126 Identities=16% Similarity=0.151 Sum_probs=64.8
Q ss_pred hhHHHHHHHhCCcEEEEcCcchh-hhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQ-LAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e-~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
.+.+..+.+.|+|.+.|..+.-+ ..+.+.. +++.|.+++..+.-.++ ++.+.......|++++
T Consensus 77 ~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~--------------i~~~G~k~gval~p~t~--~e~l~~~l~~~D~Vl~ 140 (228)
T 3ovp_A 77 EQWVKPMAVAGANQYTFHLEATENPGALIKD--------------IRENGMKVGLAIKPGTS--VEYLAPWANQIDMALV 140 (228)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHH--------------HHHTTCEEEEEECTTSC--GGGTGGGGGGCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEccCCchhHHHHHHH--------------HHHcCCCEEEEEcCCCC--HHHHHHHhccCCeEEE
Confidence 45788899999999998765211 1111111 12235555554433333 2333333345688876
Q ss_pred eCC-----CCeeee--hhhhhhcccCC-CceEEEEcCCHHHHHHHHHHhhcccCeEEEe-----cCCHH-HHHHHHHhh
Q 018935 139 DLP-----DWQVIP--AENIVASFQGS-GKTVFAISKTPSEAQIFLEALEQGLGGIVLK-----VEDVK-AVLALKEYF 203 (348)
Q Consensus 139 ~~~-----DW~iIP--lENliA~~q~~-~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~-----~~d~~-~v~~l~~~~ 203 (348)
-.- +-+.|| ++. |.++... ..-.+.+..-.. .+.+-.+.+.|+|++|.- .+|+. .++++++.+
T Consensus 141 msv~pGf~Gq~f~~~~l~k-i~~lr~~~~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~ 217 (228)
T 3ovp_A 141 MTVEPGFGGQKFMEDMMPK-VHWLRTQFPSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217 (228)
T ss_dssp ESSCTTTCSCCCCGGGHHH-HHHHHHHCTTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHH
T ss_pred eeecCCCCCcccCHHHHHH-HHHHHHhcCCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 332 334566 222 2222111 112233333332 355567789999999874 45764 466666554
No 234
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=37.27 E-value=83 Score=25.88 Aligned_cols=66 Identities=17% Similarity=0.167 Sum_probs=41.1
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC-CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG-SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..|.++++..-...=-+ .++..+.. ....++...... +......+++.|++|++.+|-+++++.+.
T Consensus 48 ~~dlvllD~~l~~~~g~-~~~~~l~~~~~~~ii~lt~~~-~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~ 114 (230)
T 2oqr_A 48 GADIVLLDLMLPGMSGT-DVCKQLRARSSVPVIMVTARD-SEIDKVVGLELGADDYVTKPYSARELIAR 114 (230)
T ss_dssp CCSEEEEESSCSSSCHH-HHHHHHHHHCSCSEEEEECCH-HHHHHHHHHHHCCSCCCCSSCCHHHHHHH
T ss_pred CCCEEEEECCCCCCCHH-HHHHHHHcCCCCCEEEEeCCC-cHHHHHHHHHcCCCEEEeCCCCHHHHHHH
Confidence 46778885542221111 23333221 345677666554 45567788999999999999999877554
No 235
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=36.96 E-value=39 Score=33.73 Aligned_cols=145 Identities=17% Similarity=0.219 Sum_probs=63.5
Q ss_pred CCCCeEEEeCCCCeeeehhhhhhcccCC--CceEE-EEcCCHHHHHHHHHHhhcccCeEEEe----------------cC
Q 018935 131 GQAENIVIDLPDWQVIPAENIVASFQGS--GKTVF-AISKTPSEAQIFLEALEQGLGGIVLK----------------VE 191 (348)
Q Consensus 131 ~~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~-a~v~~~~eA~~al~~LE~G~DGVvl~----------------~~ 191 (348)
..++.++++..+..-..+.++|.++... +..|+ ..+.+.++|+.+. +.|+|+|++. ..
T Consensus 267 aGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~---~aGad~i~vg~g~gsi~~~~~~~g~g~p 343 (511)
T 3usb_A 267 ASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALI---EAGANVVKVGIGPGSICTTRVVAGVGVP 343 (511)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHH---HHTCSEEEECSSCSTTCCHHHHHCCCCC
T ss_pred hccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHH---HhCCCEEEECCCCccccccccccCCCCC
Confidence 3689999987765545555666665432 23444 4888888887755 5799999972 22
Q ss_pred CHHHHHHHHHhhcccccccceeeeeEEEEEEEEEcCCcceEEEeecCCCC-CCceEEEeccCceEEEEeeccccC-CCCC
Q 018935 192 DVKAVLALKEYFDGRNEVSNLLSLMKATVTRVDVAGMGDRVCVDLCSLMR-PGEGLLVGSFARGLFLVHSECLES-NYIA 269 (348)
Q Consensus 192 d~~~v~~l~~~~~~~~~~~~~l~L~~atVt~V~~vGmGdRVCVDtcsll~-~GEGmLVGS~S~glFLVhsEt~es-~Yva 269 (348)
+...+.++.+.+... .+++ |-.=|+.+-- |-.-.|. --.|+.+|+ +|+-..|+-.. -|..
T Consensus 344 ~~~~l~~v~~~~~~~-----~iPV-------Ia~GGI~~~~--di~kala~GA~~V~vGs----~~~~~~es~g~~~~~~ 405 (511)
T 3usb_A 344 QLTAVYDCATEARKH-----GIPV-------IADGGIKYSG--DMVKALAAGAHVVMLGS----MFAGVAESPGETEIYQ 405 (511)
T ss_dssp HHHHHHHHHHHHHTT-----TCCE-------EEESCCCSHH--HHHHHHHTTCSEEEEST----TTTTBTTSSSCEEECS
T ss_pred cHHHHHHHHHHHHhC-----CCcE-------EEeCCCCCHH--HHHHHHHhCchhheecH----HHhcCccCchhhhhcc
Confidence 233344443333211 1111 1111322210 1111111 246788887 34434443211 1456
Q ss_pred CCCeeeecCCceeEEEecCCceeeeee
Q 018935 270 SRPFRVNAGPVHAYVLVPGGKTCYLSE 296 (348)
Q Consensus 270 ~RPFRVNAGaVHaYv~~pggkT~YLSE 296 (348)
-|.|...=|---.-.+-.+.+.||.++
T Consensus 406 g~~~k~~~gm~s~~a~~~~~~~r~~~~ 432 (511)
T 3usb_A 406 GRQFKVYRGMGSVGAMEKGSKDRYFQE 432 (511)
T ss_dssp SSEEEC---------------------
T ss_pred CeeeeeeeccccHHHHhcccccchhcc
Confidence 677776655443333335778888876
No 236
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=36.67 E-value=37 Score=24.39 Aligned_cols=39 Identities=21% Similarity=0.117 Sum_probs=27.5
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
...++......+ ......+++.|+++.+.+|-+++++.+
T Consensus 72 ~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~Kp~~~~~l~~ 110 (120)
T 2a9o_A 72 SVPILMLSAKDS-EFDKVIGLELGADDYVTKPFSNRELQA 110 (120)
T ss_dssp CCCEEEEESCCS-HHHHHHHHHHTCSEEEESSCCHHHHHH
T ss_pred CCCEEEEecCCc-hHHHHHHHhCCHhheEeCCCCHHHHHH
Confidence 345555544433 344567889999999999999987754
No 237
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=36.43 E-value=17 Score=37.30 Aligned_cols=50 Identities=14% Similarity=0.079 Sum_probs=40.2
Q ss_pred eeeecCCceeE----EEecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeec
Q 018935 273 FRVNAGPVHAY----VLVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIES 324 (348)
Q Consensus 273 FRVNAGaVHaY----v~~pggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~ 324 (348)
..|+.||+.+- -++|.|=+..=.+.+.||.|.|+|.+|+ .+-+|++..-.
T Consensus 510 v~VD~gA~~av~~GasLl~~GV~~~~g~f~~Gd~V~V~~~~g~--~ia~G~a~~ss 563 (582)
T 1iq8_A 510 VVVNKEAEPFARKGKDVFAKFVIFADPGIRPYDEVLVVNENDE--LLATGQALLSG 563 (582)
T ss_dssp EEECTTTHHHHHTTCCEEGGGEEEECTTCCTTCEEEEECTTCC--EEEEEEESSCH
T ss_pred EEECchHHHHHhcCCCcCCCceEecCCCcCCCCEEEEEeCCCC--EEEEEEEeeCH
Confidence 78999988663 5567777887788999999999999885 58888887643
No 238
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=36.30 E-value=24 Score=32.27 Aligned_cols=52 Identities=17% Similarity=0.279 Sum_probs=34.3
Q ss_pred CCeeeehhhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 142 DWQVIPAENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 142 DW~iIPlENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
+|..+. +.+|++++..+-+|++ .+++.++++.+ ++.|||||+ ||.|+.+.++
T Consensus 252 ~~~~~~-~~~v~~~~~~Gl~V~~WTVn~~~~~~~l---~~~GVDgIi--TD~P~~~~~~ 304 (313)
T 3l12_A 252 YFLDVT-PELVAEAHDLGLIVLTWTVNEPEDIRRM---ATTGVDGIV--TDYPGRTQRI 304 (313)
T ss_dssp BGGGCC-HHHHHHHHHTTCEEEEBCCCSHHHHHHH---HHHTCSEEE--ESCHHHHHHH
T ss_pred chhcCC-HHHHHHHHHCCCEEEEEcCCCHHHHHHH---HHcCCCEEE--eCCHHHHHHH
Confidence 344443 4566666666656655 36777776655 578999998 7888876553
No 239
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=36.01 E-value=12 Score=33.51 Aligned_cols=33 Identities=15% Similarity=0.037 Sum_probs=23.1
Q ss_pred cCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 018935 166 SKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (348)
Q Consensus 166 v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~ 201 (348)
+-+.++++.++ +.|+|||++...|+.-++..++
T Consensus 76 vl~~d~~~~A~---~aGAd~v~~p~~d~~v~~~ar~ 108 (224)
T 1vhc_A 76 VLTAEQVVLAK---SSGADFVVTPGLNPKIVKLCQD 108 (224)
T ss_dssp CCSHHHHHHHH---HHTCSEEECSSCCHHHHHHHHH
T ss_pred EeeHHHHHHHH---HCCCCEEEECCCCHHHHHHHHH
Confidence 34667777765 5699999988877765554444
No 240
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=35.91 E-value=42 Score=24.92 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=38.1
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..+-++++..-+. ..--.++..+.. .+..++...... +......+++.|+++.+.+|-+++++.+
T Consensus 46 ~~dlvllD~~~p~-~~g~~~~~~l~~~~~~~~~pii~~s~~~-~~~~~~~~~~~Ga~~~l~KP~~~~~L~~ 114 (122)
T 3gl9_A 46 TPDLIVLXIMMPV-MDGFTVLKKLQEKEEWKRIPVIVLTAKG-GEEDESLALSLGARKVMRKPFSPSQFIE 114 (122)
T ss_dssp CCSEEEECSCCSS-SCHHHHHHHHHTSTTTTTSCEEEEESCC-SHHHHHHHHHTTCSEEEESSCCHHHHHH
T ss_pred CCCEEEEeccCCC-CcHHHHHHHHHhcccccCCCEEEEecCC-chHHHHHHHhcChhhhccCCCCHHHHHH
Confidence 4566777433221 111234444422 234566555433 3345567899999999999999987654
No 241
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=35.49 E-value=43 Score=25.07 Aligned_cols=40 Identities=28% Similarity=0.337 Sum_probs=28.9
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecC-CHHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE-DVKAVLAL 199 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~-d~~~v~~l 199 (348)
...++...... +......+++.|+++++.+|- +++++.+.
T Consensus 86 ~~~ii~ls~~~-~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~ 126 (137)
T 2pln_A 86 SIVVLVSSDNP-TSEEEVHAFEQGADDYIAKPYRSIKALVAR 126 (137)
T ss_dssp TSEEEEEESSC-CHHHHHHHHHTTCSEEEESSCSCHHHHHHH
T ss_pred CccEEEEeCCC-CHHHHHHHHHcCCceeeeCCCCCHHHHHHH
Confidence 44566555443 345667889999999999999 99877553
No 242
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=35.12 E-value=65 Score=29.41 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=54.5
Q ss_pred EEEEEecChhhhhhhccccCCCCeEEEeCCCCeeeeh------hhhhhcccCCCceEEEEcCCHHHH---HHHHHHhhcc
Q 018935 112 GSIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIPA------ENIVASFQGSGKTVFAISKTPSEA---QIFLEALEQG 182 (348)
Q Consensus 112 ~~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPl------ENliA~~q~~~~~l~a~v~~~~eA---~~al~~LE~G 182 (348)
-.|+.-.+++-++.+.. ..|+++++..|= +.|- +||.+. ...+..++..+++.+.. ...-.+++.|
T Consensus 10 ~L~vP~~~~~~~~ka~~---gaD~vilDlEDa-v~~~~k~~Ar~~l~~~-~~~~~~~~VRVn~~~~~~~~~dl~~~~~~g 84 (273)
T 1u5h_A 10 WLFCPADAPEAFAAAAA---AADVVILDLEDG-VAEAQKPAARNALRDT-PLDPERTVVRINAGGTADQARDLEALAGTA 84 (273)
T ss_dssp EEEEETTCGGGHHHHHH---HCSEEEEESSTT-SCGGGHHHHHHHHHHS-CCCTTSEEEECCCTTCHHHHHHHHHHHTSC
T ss_pred EEEeeCCCHHHHHHHHh---CCCEEEEECCCC-CCcCCHHHHHHHHHhc-CcCCCeEEEEECCCCchHHHHHHHHHHhcC
Confidence 34555566666666544 689999988873 3333 455544 43455799999987632 3445567889
Q ss_pred cCeEEEe-cCCHHHHHHH
Q 018935 183 LGGIVLK-VEDVKAVLAL 199 (348)
Q Consensus 183 ~DGVvl~-~~d~~~v~~l 199 (348)
+|||+|. .++++++..+
T Consensus 85 ~~gi~lPKv~s~~~v~~~ 102 (273)
T 1u5h_A 85 YTTVMLPKAESAAQVIEL 102 (273)
T ss_dssp CCEEEETTCCCHHHHHTT
T ss_pred CCEEEeCCCCCHHHHHHH
Confidence 9999996 4567777643
No 243
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=35.05 E-value=49 Score=29.70 Aligned_cols=128 Identities=13% Similarity=0.198 Sum_probs=65.9
Q ss_pred hhHHHHHHHhCCcEEEEcCcc-hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~-~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
.+.+..+.+.|+|.+.|..+. -.... ++ + +.+++.|++++..+.-.++. +.+.......|++++
T Consensus 70 ~~~i~~~~~aGAd~itvh~Ea~~~~~~---~~--i--------~~i~~~G~k~gv~lnp~tp~--~~~~~~l~~~D~Vlv 134 (231)
T 3ctl_A 70 QDYIAQLARAGADFITLHPETINGQAF---RL--I--------DEIRRHDMKVGLILNPETPV--EAMKYYIHKADKITV 134 (231)
T ss_dssp GGTHHHHHHHTCSEEEECGGGCTTTHH---HH--H--------HHHHHTTCEEEEEECTTCCG--GGGTTTGGGCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECcccCCccHH---HH--H--------HHHHHcCCeEEEEEECCCcH--HHHHHHHhcCCEEEE
Confidence 345799999999999987653 11111 11 0 11234467766665444442 333333346788875
Q ss_pred eC-----CCCeeee--hhhh---hhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe-c-----CC-H-HHHHH
Q 018935 139 DL-----PDWQVIP--AENI---VASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK-V-----ED-V-KAVLA 198 (348)
Q Consensus 139 ~~-----~DW~iIP--lENl---iA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~-~-----~d-~-~~v~~ 198 (348)
-. .+-+.|| ++.| -+..+ +.+ -.+.+-.-.. .+.+-.+.+.|+|+++.- + +| + +.+++
T Consensus 135 msV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~-~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~ 212 (231)
T 3ctl_A 135 MTVDPGFAGQPFIPEMLDKLAELKAWREREGLE-YEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212 (231)
T ss_dssp ESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCC-CEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGGCSSHHHHHHH
T ss_pred eeeccCcCCccccHHHHHHHHHHHHHHhccCCC-ceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHH
Confidence 32 2334554 3322 11111 112 2333333222 233445578899999998 3 36 5 45666
Q ss_pred HHHhhc
Q 018935 199 LKEYFD 204 (348)
Q Consensus 199 l~~~~~ 204 (348)
|++.+.
T Consensus 213 l~~~~~ 218 (231)
T 3ctl_A 213 MTAQIL 218 (231)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666553
No 244
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=34.38 E-value=58 Score=27.48 Aligned_cols=105 Identities=13% Similarity=0.167 Sum_probs=60.3
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~ 139 (348)
..+.....+.|.+-++++.+ .+.++++.+-. |.. ..+...++++.++.+. ...++.+|+-
T Consensus 13 ~~la~~L~~~g~~v~vid~~-~~~~~~l~~~~----------------~~~-~i~gd~~~~~~l~~a~--i~~ad~vi~~ 72 (218)
T 3l4b_C 13 YYLARSMLSRKYGVVIINKD-RELCEEFAKKL----------------KAT-IIHGDGSHKEILRDAE--VSKNDVVVIL 72 (218)
T ss_dssp HHHHHHHHHTTCCEEEEESC-HHHHHHHHHHS----------------SSE-EEESCTTSHHHHHHHT--CCTTCEEEEC
T ss_pred HHHHHHHHhCCCeEEEEECC-HHHHHHHHHHc----------------CCe-EEEcCCCCHHHHHhcC--cccCCEEEEe
Confidence 44556666789887777754 44554433210 000 1121234555544432 3467888886
Q ss_pred CCCCeeeehhhhhhcc----cCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 140 LPDWQVIPAENIVASF----QGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 140 ~~DW~iIPlENliA~~----q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
..|- .+|+++.. .....++++.+++.+.++.+ .+.|+|-|+....
T Consensus 73 ~~~d----~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l---~~~G~d~vi~p~~ 121 (218)
T 3l4b_C 73 TPRD----EVNLFIAQLVMKDFGVKRVVSLVNDPGNMEIF---KKMGITTVLNLTT 121 (218)
T ss_dssp CSCH----HHHHHHHHHHHHTSCCCEEEECCCSGGGHHHH---HHHTCEECCCHHH
T ss_pred cCCc----HHHHHHHHHHHHHcCCCeEEEEEeCcchHHHH---HHCCCCEEECHHH
Confidence 6553 34543321 13456899999999998876 4569998775443
No 245
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=34.36 E-value=68 Score=30.30 Aligned_cols=31 Identities=10% Similarity=0.028 Sum_probs=25.6
Q ss_pred CcEEEEEeCchhHHHHHHHhCCcE-----EEEcCcc
Q 018935 50 PKRVWIWTESKQVMTAAVERGWNT-----FVFLSEN 80 (348)
Q Consensus 50 ~K~vWiw~~~K~~vT~ALEsG~~~-----~v~~~~~ 80 (348)
-..-|.+..+.+.+..|..+|+|. ++++-||
T Consensus 22 l~rs~l~~~~~~~~eka~~~~aD~~~~~~vilDLED 57 (332)
T 3qqw_A 22 LAACEHFAGSEKLIGKAMDLQVEYGPVFDVTCDCED 57 (332)
T ss_dssp CCSEEEEECSHHHHHHHHHHHHHHCSSEEEEEEHHH
T ss_pred ccHHHHhcCCHHHHHHHHhCCCCcCCCCcEEEECCC
Confidence 344688888899999999999999 9988654
No 246
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=33.91 E-value=46 Score=25.17 Aligned_cols=66 Identities=8% Similarity=0.112 Sum_probs=38.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-+. ..--.++..+.. ....++..... .+......+++.|+++.+.+|-+++++.+.
T Consensus 48 ~~dlvl~D~~lp~-~~g~~~~~~lr~~~~~~~~pii~~t~~-~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 117 (136)
T 3t6k_A 48 LPDALICDVLLPG-IDGYTLCKRVRQHPLTKTLPILMLTAQ-GDISAKIAGFEAGANDYLAKPFEPQELVYR 117 (136)
T ss_dssp CCSEEEEESCCSS-SCHHHHHHHHHHSGGGTTCCEEEEECT-TCHHHHHHHHHHTCSEEEETTCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHcCCCcCCccEEEEecC-CCHHHHHHHHhcCcceEEeCCCCHHHHHHH
Confidence 4567777443221 111223333322 23345554444 344456788999999999999999877643
No 247
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=33.82 E-value=54 Score=30.72 Aligned_cols=51 Identities=16% Similarity=0.351 Sum_probs=37.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEe
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLK 189 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~ 189 (348)
..+.+.+.+.+ |...++.++...+..++..+.+.++|+. +.+.|+|.|++.
T Consensus 122 g~~~V~~~~g~----~~~~~i~~~~~~g~~v~~~v~t~~~a~~---a~~~GaD~i~v~ 172 (369)
T 3bw2_A 122 PVPVVSFHFGV----PDREVIARLRRAGTLTLVTATTPEEARA---VEAAGADAVIAQ 172 (369)
T ss_dssp CCSEEEEESSC----CCHHHHHHHHHTTCEEEEEESSHHHHHH---HHHTTCSEEEEE
T ss_pred CCCEEEEeCCC----CcHHHHHHHHHCCCeEEEECCCHHHHHH---HHHcCCCEEEEe
Confidence 57788887654 3345666665556789999999998874 457899999994
No 248
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=33.69 E-value=66 Score=29.12 Aligned_cols=112 Identities=18% Similarity=0.070 Sum_probs=65.1
Q ss_pred chhHHHHHHHhCCcEEEEcCcc------hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCC
Q 018935 59 SKQVMTAAVERGWNTFVFLSEN------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQ 132 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~~------~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~ 132 (348)
--++...+.+.|++++=+-.++ .+..+.+.+-.- -|+..+| -|.++.++++ +.. ..
T Consensus 67 p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~-lPvl~kd---------------fI~d~~qi~~-a~~-~G 128 (254)
T 1vc4_A 67 PVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVD-LPLLRKD---------------FVVDPFMLEE-ARA-FG 128 (254)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCC-SCEEEES---------------CCCSHHHHHH-HHH-TT
T ss_pred HHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhcC-CCEEECC---------------cCCCHHHHHH-HHH-cC
Confidence 3678888999999987664321 222222222100 1222111 1356666554 322 36
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
+|.|++...+-+ =-++.++.....-+-..+.++++.+|++ .+++.|+|=|-+.+.+
T Consensus 129 AD~VlL~~~~l~-~~l~~l~~~a~~lGl~~lvev~~~~E~~---~a~~~gad~IGvn~~~ 184 (254)
T 1vc4_A 129 ASAALLIVALLG-ELTGAYLEEARRLGLEALVEVHTERELE---IALEAGAEVLGINNRD 184 (254)
T ss_dssp CSEEEEEHHHHG-GGHHHHHHHHHHHTCEEEEEECSHHHHH---HHHHHTCSEEEEESBC
T ss_pred CCEEEECccchH-HHHHHHHHHHHHCCCeEEEEECCHHHHH---HHHHcCCCEEEEcccc
Confidence 788888666444 3466666532223456789999999987 5667788987776543
No 249
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=33.46 E-value=1.5e+02 Score=23.89 Aligned_cols=38 Identities=11% Similarity=0.198 Sum_probs=27.9
Q ss_pred eEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 161 TVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 161 ~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
.++..... .+......+++.|+++++.+|-+++++...
T Consensus 87 pii~lt~~-~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 124 (205)
T 1s8n_A 87 PIVVLTAF-SQRDLVERARDAGAMAYLVKPFSISDLIPA 124 (205)
T ss_dssp CEEEEEEG-GGHHHHHTTGGGSCEEEEEESCCHHHHHHH
T ss_pred CEEEEecC-CCHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 45544433 345666789999999999999998876543
No 250
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=33.13 E-value=1.2e+02 Score=28.23 Aligned_cols=14 Identities=14% Similarity=0.067 Sum_probs=11.6
Q ss_pred HHHHHHHhCCcEEE
Q 018935 62 VMTAAVERGWNTFV 75 (348)
Q Consensus 62 ~vT~ALEsG~~~~v 75 (348)
.+..|++.|+|++=
T Consensus 113 ~ve~a~~~GAdaV~ 126 (304)
T 1to3_A 113 NAQAVKRDGAKALK 126 (304)
T ss_dssp CHHHHHHTTCCEEE
T ss_pred hHHHHHHcCCCEEE
Confidence 37889999999864
No 251
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=33.11 E-value=35 Score=33.08 Aligned_cols=109 Identities=13% Similarity=0.061 Sum_probs=58.6
Q ss_pred CchhHHHHHHHhCCcEEEEcCcc-hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecC-hhhhhhhcccc-CCCC
Q 018935 58 ESKQVMTAAVERGWNTFVFLSEN-QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVST-PQELQQLQPAD-GQAE 134 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~~~~-~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~-~ed~e~~~~~~-~~~~ 134 (348)
-+.++..++-+.|.-++|-.... .+.+++..+..+ .+++ .+.. ....+.+.... ...+
T Consensus 54 te~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i~~~~~-----------------~~~~--~~g~~~~~~e~~~~a~~aGvd 114 (361)
T 3r2g_A 54 TESNMANFMHSKGAMGALHRFMTIEENIQEFKKCKG-----------------PVFV--SVGCTENELQRAEALRDAGAD 114 (361)
T ss_dssp CSHHHHHHHHHTTCEEBCCSCSCHHHHHHHHHTCCS-----------------CCBE--EECSSHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHhhcce-----------------EEEE--EcCCCHHHHHHHHHHHHcCCC
Confidence 45788888888887666643211 233333333221 1122 2222 23333333222 2578
Q ss_pred eEEEeCC-CCeeeehhhhhhcccCC--CceEEE-EcCCHHHHHHHHHHhhcccCeEEEe
Q 018935 135 NIVIDLP-DWQVIPAENIVASFQGS--GKTVFA-ISKTPSEAQIFLEALEQGLGGIVLK 189 (348)
Q Consensus 135 ~vvv~~~-DW~iIPlENliA~~q~~--~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~ 189 (348)
.+.++.. +.. ..+.++|+.+... +..|++ .+.++++|+.+ .+.|+|+|.+.
T Consensus 115 vI~id~a~G~~-~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a---~~aGaD~I~Vg 169 (361)
T 3r2g_A 115 FFCVDVAHAHA-KYVGKTLKSLRQLLGSRCIMAGNVATYAGADYL---ASCGADIIKAG 169 (361)
T ss_dssp EEEEECSCCSS-HHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHH---HHTTCSEEEEC
T ss_pred EEEEeCCCCCc-HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHH---HHcCCCEEEEc
Confidence 8888643 221 1122344444332 457888 69999998765 47799999983
No 252
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=33.03 E-value=1.5e+02 Score=22.04 Aligned_cols=64 Identities=13% Similarity=0.096 Sum_probs=38.6
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC--CceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGS--GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+... ...|+......+ ....+++.|+++++.+|-+++++.+.
T Consensus 55 ~~dlvi~d~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~---~~~~~~~~g~~~~l~KP~~~~~l~~~ 120 (143)
T 2qv0_A 55 KVDAIFLDINIPS-LDGVLLAQNISQFAHKPFIVFITAWKE---HAVEAFELEAFDYILKPYQESRIINM 120 (143)
T ss_dssp CCSEEEECSSCSS-SCHHHHHHHHTTSTTCCEEEEEESCCT---THHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHccCCCceEEEEeCCHH---HHHHHHhCCcceEEeCCCCHHHHHHH
Confidence 4577777433221 2222344444332 334666655533 35677899999999999999887554
No 253
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=32.64 E-value=1.4e+02 Score=24.14 Aligned_cols=108 Identities=14% Similarity=0.159 Sum_probs=57.4
Q ss_pred hhHHHHHHHh-CCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEE
Q 018935 60 KQVMTAAVER-GWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVI 138 (348)
Q Consensus 60 K~~vT~ALEs-G~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv 138 (348)
..+.....+. |.+-++++.+ .+..+.+... |.. ..+....+++.++.+. ....++.+|+
T Consensus 52 ~~~a~~L~~~~g~~V~vid~~-~~~~~~~~~~-----------------g~~-~~~gd~~~~~~l~~~~-~~~~ad~vi~ 111 (183)
T 3c85_A 52 TGAYDELRARYGKISLGIEIR-EEAAQQHRSE-----------------GRN-VISGDATDPDFWERIL-DTGHVKLVLL 111 (183)
T ss_dssp HHHHHHHHHHHCSCEEEEESC-HHHHHHHHHT-----------------TCC-EEECCTTCHHHHHTBC-SCCCCCEEEE
T ss_pred HHHHHHHHhccCCeEEEEECC-HHHHHHHHHC-----------------CCC-EEEcCCCCHHHHHhcc-CCCCCCEEEE
Confidence 5566666677 9987777654 4444433322 110 1111223444333320 1346788888
Q ss_pred eCCCCe-eeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 139 DLPDWQ-VIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 139 ~~~DW~-iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
-..+.. .+.+-..+.. .+...++++.+++.+.++.+ .+.|+|-|+....
T Consensus 112 ~~~~~~~~~~~~~~~~~-~~~~~~ii~~~~~~~~~~~l---~~~G~~~vi~p~~ 161 (183)
T 3c85_A 112 AMPHHQGNQTALEQLQR-RNYKGQIAAIAEYPDQLEGL---LESGVDAAFNIYS 161 (183)
T ss_dssp CCSSHHHHHHHHHHHHH-TTCCSEEEEEESSHHHHHHH---HHHTCSEEEEHHH
T ss_pred eCCChHHHHHHHHHHHH-HCCCCEEEEEECCHHHHHHH---HHcCCCEEEchHH
Confidence 555422 2222222222 23356899999998887744 3569998765444
No 254
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=32.57 E-value=2.1e+02 Score=27.03 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=49.5
Q ss_pred CCCeEEEeCCCC----------eeeehhhhhhcc-------cCCCceEEEEcCCH-----HHH-HHHHHHhhcccCeEEE
Q 018935 132 QAENIVIDLPDW----------QVIPAENIVASF-------QGSGKTVFAISKTP-----SEA-QIFLEALEQGLGGIVL 188 (348)
Q Consensus 132 ~~~~vvv~~~DW----------~iIPlENliA~~-------q~~~~~l~a~v~~~-----~eA-~~al~~LE~G~DGVvl 188 (348)
.+.-+-|+...| +++|.|..++.+ .+.+.-|+|..... +|| +-+.--.|.|+|+|.+
T Consensus 111 Gaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~ 190 (298)
T 3eoo_A 111 GVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFP 190 (298)
T ss_dssp TCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEe
Confidence 566777888776 489999766554 23455788877665 222 3344456789999999
Q ss_pred e-cCCHHHHHHHHHhh
Q 018935 189 K-VEDVKAVLALKEYF 203 (348)
Q Consensus 189 ~-~~d~~~v~~l~~~~ 203 (348)
. ..|+++++++.+.+
T Consensus 191 ~~~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 191 EAMKTLDDYRRFKEAV 206 (298)
T ss_dssp CCCCSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHc
Confidence 7 44789888877765
No 255
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=32.45 E-value=57 Score=31.50 Aligned_cols=101 Identities=10% Similarity=0.054 Sum_probs=62.2
Q ss_pred hhHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEe
Q 018935 60 KQVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVID 139 (348)
Q Consensus 60 K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~ 139 (348)
..+.....+.|.+-++++.+ .+.++++.+.+. . .++...++++-++.+- ...++.+|+.
T Consensus 17 ~~va~~L~~~g~~vvvId~d-~~~v~~~~~~g~-----------------~-vi~GDat~~~~L~~ag--i~~A~~viv~ 75 (413)
T 3l9w_A 17 QITGRLLLSSGVKMVVLDHD-PDHIETLRKFGM-----------------K-VFYGDATRMDLLESAG--AAKAEVLINA 75 (413)
T ss_dssp HHHHHHHHHTTCCEEEEECC-HHHHHHHHHTTC-----------------C-CEESCTTCHHHHHHTT--TTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEECC-HHHHHHHHhCCC-----------------e-EEEcCCCCHHHHHhcC--CCccCEEEEC
Confidence 45566666789998887764 555554443311 1 1333335555554442 3467888886
Q ss_pred CCCCeeeehhhhhhc----ccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEE
Q 018935 140 LPDWQVIPAENIVAS----FQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL 188 (348)
Q Consensus 140 ~~DW~iIPlENliA~----~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl 188 (348)
..| +-.|+... -.+.+.+|++.+++.+.+..+ .+.|+|-|+-
T Consensus 76 ~~~----~~~n~~i~~~ar~~~p~~~Iiara~~~~~~~~L---~~~Gad~Vi~ 121 (413)
T 3l9w_A 76 IDD----PQTNLQLTEMVKEHFPHLQIIARARDVDHYIRL---RQAGVEKPER 121 (413)
T ss_dssp CSS----HHHHHHHHHHHHHHCTTCEEEEEESSHHHHHHH---HHTTCSSCEE
T ss_pred CCC----hHHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH---HHCCCCEEEC
Confidence 665 34454332 223456899999999998876 4689998874
No 256
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=32.40 E-value=40 Score=30.62 Aligned_cols=65 Identities=15% Similarity=0.160 Sum_probs=41.7
Q ss_pred CCCCCceEEEeccCceEEEEeecccc---CCCCCCCC----------eeeecCCceeEEEecCCceeeee---------e
Q 018935 239 LMRPGEGLLVGSFARGLFLVHSECLE---SNYIASRP----------FRVNAGPVHAYVLVPGGKTCYLS---------E 296 (348)
Q Consensus 239 ll~~GEGmLVGS~S~glFLVhsEt~e---s~Yva~RP----------FRVNAGaVHaYv~~pggkT~YLS---------E 296 (348)
+|+.|.=+.|-... ..+.|..|... -+|.+.+. |. +|-.-++||.-|+|+..-.. +
T Consensus 114 ~L~~gd~L~iP~r~-~tV~V~G~V~~p~~v~~~~g~~~~dYi~~agg~~-~Ad~~~v~VI~~nG~v~~~~~a~Wn~~~~~ 191 (236)
T 3p42_A 114 PLVGDYTLYTVQRP-VTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLA-GADKNNVMVITPEGETVVAPVALWNKRHVE 191 (236)
T ss_dssp BCCEEEEEECCCCC-SEEEEEESBTTCEEEECCTTCCHHHHHTTSCBCT-TBCSSEEEEECTTSCEEEEECSSTTCCCEE
T ss_pred ccCCCCEEEECCCC-CEEEEEeecCCcCeEeecCCCCHHHHHHhCCCCC-CCCCccEEEEeCCCCEEeccccccccCCCC
Confidence 35555544455444 34666666421 12444433 55 67778899999999876654 8
Q ss_pred ccCCCeEEE
Q 018935 297 LKSGKEVIV 305 (348)
Q Consensus 297 L~aG~eVLv 305 (348)
+.+||+|.|
T Consensus 192 l~PG~~I~V 200 (236)
T 3p42_A 192 PPPGSQLWL 200 (236)
T ss_dssp CCTTCEEEE
T ss_pred CCCCCEEEE
Confidence 999999876
No 257
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=32.17 E-value=46 Score=24.16 Aligned_cols=66 Identities=15% Similarity=0.082 Sum_probs=36.3
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. +.--.++..+.. ....++..... .+......+++.|+++.+.+|-+++++.+.
T Consensus 45 ~~dlvi~D~~l~~-~~g~~~~~~l~~~~~~~~~~ii~~s~~-~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (124)
T 1mb3_A 45 KPDLILMDIQLPE-ISGLEVTKWLKEDDDLAHIPVVAVTAF-AMKGDEERIREGGCEAYISKPISVVHFLET 114 (124)
T ss_dssp CCSEEEEESBCSS-SBHHHHHHHHHHSTTTTTSCEEEEC-------CHHHHHHHTCSEEECSSCCHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHcCccccCCcEEEEECC-CCHHHHHHHHhCCCCEEEeCCCCHHHHHHH
Confidence 4567777443221 112233444332 23456655443 334455678899999999999999877653
No 258
>1q5x_A Regulator of RNAse E activity A; 3-layer sandwich, alpha-beta structure, parallel beta sheet, antiparallel beta sheet, hydrolase inhibitor; 2.00A {Escherichia coli} SCOP: c.8.7.1
Probab=31.98 E-value=11 Score=32.41 Aligned_cols=27 Identities=37% Similarity=0.492 Sum_probs=23.3
Q ss_pred eeeeeccCCCeEEEEcCCCCeeEEeeee
Q 018935 292 CYLSELKSGKEVIVVDQKGRQRTAVVGR 319 (348)
Q Consensus 292 ~YLSEL~aG~eVLvVd~~G~tR~~~VGR 319 (348)
.+|.++..|| ||++|..|..+.+.+|-
T Consensus 50 ~al~~~~~G~-VlVvd~~g~~~~a~~G~ 76 (161)
T 1q5x_A 50 DLLEQNGRGR-VLVVDGGGSVRRALVDA 76 (161)
T ss_dssp HHHTSCCTTE-EEEEECTTCSSSEEECH
T ss_pred HHHhhcCCCC-EEEEECCCCCCceeehH
Confidence 5788888887 99999999999998884
No 259
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=31.47 E-value=42 Score=29.02 Aligned_cols=131 Identities=14% Similarity=0.132 Sum_probs=0.0
Q ss_pred hHHHHHHHhCCcEEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeEEEeC
Q 018935 61 QVMTAAVERGWNTFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENIVIDL 140 (348)
Q Consensus 61 ~~vT~ALEsG~~~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~vvv~~ 140 (348)
+++..+.+.|+|.+.+...+......-..+..+.. +.+.-+.++..-.-|.++++.+.+...- ++.+++
T Consensus 35 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~-------i~~~~~iPvi~~Ggi~~~~~~~~~~~~G--ad~V~l-- 103 (252)
T 1ka9_F 35 EAARAYDEAGADELVFLDISATHEERAILLDVVAR-------VAERVFIPLTVGGGVRSLEDARKLLLSG--ADKVSV-- 103 (252)
T ss_dssp HHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHH-------HHTTCCSCEEEESSCCSHHHHHHHHHHT--CSEEEE--
T ss_pred HHHHHHHHcCCCEEEEEcCCccccCccccHHHHHH-------HHHhCCCCEEEECCcCCHHHHHHHHHcC--CCEEEE--
Q ss_pred CCCeeee----hhhhhhcccCCCceEEEEcCC-----------------HHHHHHHHHHhhcccCeEEEecCC-------
Q 018935 141 PDWQVIP----AENIVASFQGSGKTVFAISKT-----------------PSEAQIFLEALEQGLGGIVLKVED------- 192 (348)
Q Consensus 141 ~DW~iIP----lENliA~~q~~~~~l~a~v~~-----------------~~eA~~al~~LE~G~DGVvl~~~d------- 192 (348)
+-..++ ++.+...+....-.+-..+++ .+-.+.+..+.+.|++++++.+.+
T Consensus 104 -g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g 182 (252)
T 1ka9_F 104 -NSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEG 182 (252)
T ss_dssp -CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSC
T ss_pred -ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCC
Q ss_pred --HHHHHHHHHhh
Q 018935 193 --VKAVLALKEYF 203 (348)
Q Consensus 193 --~~~v~~l~~~~ 203 (348)
.+.++++++.+
T Consensus 183 ~~~~~i~~l~~~~ 195 (252)
T 1ka9_F 183 YDLRLTRMVAEAV 195 (252)
T ss_dssp CCHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHc
No 260
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=31.04 E-value=80 Score=23.31 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=38.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC--CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG--SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~--~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..+.++++..-.. ..--.++..+.. ....++......+ ......+++.|+++.+.+|-+++++...
T Consensus 47 ~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (136)
T 1mvo_A 47 KPDLIVLDVMLPK-LDGIEVCKQLRQQKLMFPILMLTAKDE-EFDKVLGLELGADDYMTKPFSPREVNAR 114 (136)
T ss_dssp CCSEEEEESSCSS-SCHHHHHHHHHHTTCCCCEEEEECTTC-CCCHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred CCCEEEEecCCCC-CCHHHHHHHHHcCCCCCCEEEEECCCC-HHHHHHHHhCCCCEEEECCCCHHHHHHH
Confidence 4577777543222 122233444322 2345555544433 2344567899999999999999877553
No 261
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=30.87 E-value=57 Score=28.71 Aligned_cols=32 Identities=16% Similarity=0.110 Sum_probs=27.1
Q ss_pred CCCcEEEEEeC-----chhHHHHHHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWTE-----SKQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~~-----~K~~vT~ALEsG~~~~v~~~~ 79 (348)
.+.+.||+|+- +++.+...++.|+|+|+.+..
T Consensus 210 ~~G~~v~~wTv~~~~n~~~~~~~l~~~GvdgI~TD~p 246 (258)
T 2o55_A 210 EKGLSVTVWMPWIFDDSEEDWKKCLELQVDLICSNYP 246 (258)
T ss_dssp HTTCEEEEECCTTCCCCHHHHHHHHHHTCSEEEESCH
T ss_pred HCCCEEEEeeCCCCCCCHHHHHHHHHcCCCEEEeCCH
Confidence 45678999996 688999999999999998653
No 262
>4f3j_A Complement C1Q tumor necrosis factor-related PROT; late-onset retinal macular degeneration, L-ORMD, L-ORD, AMD, related macular degeneration; 1.34A {Homo sapiens}
Probab=30.31 E-value=1.9e+02 Score=23.58 Aligned_cols=51 Identities=22% Similarity=0.144 Sum_probs=34.4
Q ss_pred eEEEEEEEEEcCCcceEEEeecCCCCCCceE-EEeccC----ceEEEEeeccccCCCCCC
Q 018935 216 MKATVTRVDVAGMGDRVCVDLCSLMRPGEGL-LVGSFA----RGLFLVHSECLESNYIAS 270 (348)
Q Consensus 216 ~~atVt~V~~vGmGdRVCVDtcsll~~GEGm-LVGS~S----~glFLVhsEt~es~Yva~ 270 (348)
..+....|-.+=-||+|+|-. ..|.+- +.++.. =.-||++.+...+||.+-
T Consensus 88 ~~~s~s~il~L~~GD~V~v~~----~~~~~~~~~~~~~~~s~FsGfLl~~D~~~~~~~~~ 143 (148)
T 4f3j_A 88 ASLSGGAMVRLEPEDQVWVQV----GVGDYIGIYASIKTDSTFSGFLVYSDWHSSPVFAH 143 (148)
T ss_dssp EEEEEEEEEEECTTCEEEEEC----CSTTCEEEECBTTBCCEEEEEEEEESCCSSTTTCC
T ss_pred ceEeeEEEEEcCCCCEEEEEE----EcCCCceEEcCCCCCeEEEEEEEeecCCCCceEEe
Confidence 345566677888999999974 233332 334321 256899999999998764
No 263
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=30.24 E-value=52 Score=23.10 Aligned_cols=76 Identities=12% Similarity=0.053 Sum_probs=43.0
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhcccC----CCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQG----SGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 117 v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q~----~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
..+.++....... ...+.++++..-.. ..-..++..+.. ....++......+.. .+++.|+++++.+|-+
T Consensus 31 ~~~~~~~~~~l~~-~~~dlii~d~~~~~-~~~~~~~~~l~~~~~~~~~~ii~~~~~~~~~----~~~~~g~~~~l~kp~~ 104 (119)
T 2j48_A 31 LVDGSTALDQLDL-LQPIVILMAWPPPD-QSCLLLLQHLREHQADPHPPLVLFLGEPPVD----PLLTAQASAILSKPLD 104 (119)
T ss_dssp ESCHHHHHHHHHH-HCCSEEEEECSTTC-CTHHHHHHHHHHTCCCSSCCCEEEESSCCSS----HHHHHHCSEECSSCST
T ss_pred ecCHHHHHHHHHh-cCCCEEEEecCCCC-CCHHHHHHHHHhccccCCCCEEEEeCCCCch----hhhhcCHHHhccCCCC
Confidence 4555543332222 24677777543221 222234444332 345566665554433 8889999999999998
Q ss_pred HHHHHH
Q 018935 193 VKAVLA 198 (348)
Q Consensus 193 ~~~v~~ 198 (348)
++++.+
T Consensus 105 ~~~l~~ 110 (119)
T 2j48_A 105 PQLLLT 110 (119)
T ss_dssp THHHHH
T ss_pred HHHHHH
Confidence 887654
No 264
>1dfa_A PI-SCEI endonuclease; intein, homing endonuclease, hydrolase; 2.00A {Saccharomyces cerevisiae} SCOP: b.86.1.2 d.95.2.2 d.95.2.2 PDB: 1lws_A 1lwt_A 1vde_A 1ef0_A 1um2_A 1jva_A
Probab=30.04 E-value=11 Score=36.90 Aligned_cols=34 Identities=26% Similarity=0.442 Sum_probs=27.2
Q ss_pred ceeEEEecCCceeeeeeccCCCeEEEEcCCCCeeEE
Q 018935 280 VHAYVLVPGGKTCYLSELKSGKEVIVVDQKGRQRTA 315 (348)
Q Consensus 280 VHaYv~~pggkT~YLSEL~aG~eVLvVd~~G~tR~~ 315 (348)
-...|+|++|..+=+.||+.||+||..| |+.|.+
T Consensus 4 ~~T~V~~~dG~~k~I~~i~~Gd~v~~~d--g~~~~v 37 (454)
T 1dfa_A 4 KGTNVLMADGSIECIENIEVGNKVMGKD--GRPREV 37 (454)
T ss_dssp TTCEEEBTTSCEEEGGGCCTTCCBBCTT--SCBCCB
T ss_pred CCCeEEeCCCCeeEehhcccCCEEECCC--CCceEE
Confidence 3467899999999999999999987654 665543
No 265
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=29.94 E-value=74 Score=29.51 Aligned_cols=104 Identities=15% Similarity=0.099 Sum_probs=58.1
Q ss_pred eeeEEEEEEEEEcCCcc-eEEEeec-----CCCCCCceEEEeccCceEEEEeeccccCCCCCCCCeeee----cCCceeE
Q 018935 214 SLMKATVTRVDVAGMGD-RVCVDLC-----SLMRPGEGLLVGSFARGLFLVHSECLESNYIASRPFRVN----AGPVHAY 283 (348)
Q Consensus 214 ~L~~atVt~V~~vGmGd-RVCVDtc-----sll~~GEGmLVGS~S~glFLVhsEt~es~Yva~RPFRVN----AGaVHaY 283 (348)
...+++|++++.+.-.= ++.+..- .-+.||+=+-| .-.....++...|||=+- .|-+.=.
T Consensus 151 ~~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l----------~~~~~~~~~~~~R~YSi~s~p~~~~~~i~ 220 (396)
T 1gvh_A 151 GTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGV----------WLKPEGFPHQEIRQYSLTRKPDGKGYRIA 220 (396)
T ss_dssp SEEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEE----------EECCTTCSSCEEEEEECCSCCCSSCEEEE
T ss_pred CcEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCeEEE----------EecCCCCccceeecceeccCCCCCeEEEE
Confidence 45789999999986322 1222221 12445543322 211001123334555442 2444445
Q ss_pred EEec--CCceeeeee-ccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEEE
Q 018935 284 VLVP--GGKTCYLSE-LKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVEA 332 (348)
Q Consensus 284 v~~p--ggkT~YLSE-L~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIeA 332 (348)
|..- |.-|+||.+ |+.||+|.+-...|.-.. - .-..+|++||=+
T Consensus 221 Vk~~~~G~~S~~L~~~l~~Gd~v~v~gP~G~f~l---~--~~~~~~~vlIag 267 (396)
T 1gvh_A 221 VKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFM---A--VADDTPVTLISA 267 (396)
T ss_dssp EECCTTCHHHHHHHHTCCTTCEEEEEEEECSCCC---C--CCTTCCEEEEEE
T ss_pred EEEcCCCcchHHHHhcCCCCCEEEEEcCCcceEC---C--CCCCCCEEEEec
Confidence 5553 667999997 999999999888885421 0 013689998843
No 266
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=29.89 E-value=2.4e+02 Score=26.39 Aligned_cols=90 Identities=14% Similarity=0.116 Sum_probs=48.8
Q ss_pred EEEEecChhhhhhhccccCCCCeEEEeCCCCeeee------hhhhhhcccC---CCceEEEEcCCHHH---HHHHHHHhh
Q 018935 113 SIIEVSTPQELQQLQPADGQAENIVIDLPDWQVIP------AENIVASFQG---SGKTVFAISKTPSE---AQIFLEALE 180 (348)
Q Consensus 113 ~~~~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIP------lENliA~~q~---~~~~l~a~v~~~~e---A~~al~~LE 180 (348)
.|+.=.+++-++.+.. ...|++|++..|= +.| .+|+.+.++. ....++..+++.+- ..-...+|.
T Consensus 49 L~vP~~~p~~~eka~~--~gaD~vilDLEDa-V~~~~k~~Ar~~l~~~l~~~~~~~~~~~VRVn~~~t~~~~~Dl~~~l~ 125 (316)
T 3qll_A 49 LFTPATRSDRFAKAAE--NGADVAIIDLEDS-VSQADKEQARQKAISYLSSRPATSLPLALRINGLDTRAGIEDIHALLE 125 (316)
T ss_dssp EEEESCC------------CCSEEEEECSTT-SCGGGHHHHHHHHHC---------CCEEEECCCTTSHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHhh--CCCCEEEEeCCCC-CCCcCHHHHHHHHHHHHhcccccCCeEEEEECCCCCchhHHHHHHHHh
Confidence 3433344444443332 3688999988773 333 2355554433 23578999988752 223345677
Q ss_pred ccc--CeEEEe-cCCHHHHHHHHHhhcc
Q 018935 181 QGL--GGIVLK-VEDVKAVLALKEYFDG 205 (348)
Q Consensus 181 ~G~--DGVvl~-~~d~~~v~~l~~~~~~ 205 (348)
.|. |||+|. .++++++..+.+.+..
T Consensus 126 ~g~~~~gIvlPKvesa~~v~~~~~~l~~ 153 (316)
T 3qll_A 126 CGSLPDYLVLPKTESAAHLQILDRLMMF 153 (316)
T ss_dssp SCCCCSEEEETTCCSHHHHHHHHHHTSC
T ss_pred CCCCCCEEEeCCCCCHHHHHHHHHHHHh
Confidence 775 999997 4678999888877753
No 267
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=29.75 E-value=95 Score=27.93 Aligned_cols=40 Identities=23% Similarity=0.388 Sum_probs=28.2
Q ss_pred CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEE
Q 018935 288 GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 288 ggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
|.-|+||.+|+.||+|.+-...|+.-... .-..+|++||=
T Consensus 126 G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~----~~~~~~~vlIa 165 (310)
T 3vo2_A 126 GVCSNFLCDLKPGADVKITGPVGKEMLMP----KDPNATVIMLA 165 (310)
T ss_dssp CHHHHHHHTCCTTCEEEEEEEECSTTCCB----SCTTCEEEEEE
T ss_pred cchhhHHhcCCCCCEEEEEeccCCcccCC----CCCCCCEEEEe
Confidence 66899999999999999987777532110 01347888873
No 268
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=29.46 E-value=17 Score=32.18 Aligned_cols=78 Identities=10% Similarity=-0.018 Sum_probs=40.0
Q ss_pred EecChhhhhhhcccc--CCCCeEEEeCCCCeeee-hhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCC
Q 018935 116 EVSTPQELQQLQPAD--GQAENIVIDLPDWQVIP-AENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVED 192 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~--~~~~~vvv~~~DW~iIP-lENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d 192 (348)
...++++....+..+ +..+.+-+..++..-.- ++.+-.++. .-..-...+-+.++++.++ +.|+|||++...|
T Consensus 23 r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~-~~~vgagtvi~~d~~~~A~---~aGAd~v~~p~~d 98 (214)
T 1wbh_A 23 VVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVP-EAIVGAGTVLNPQQLAEVT---EAGAQFAISPGLT 98 (214)
T ss_dssp CCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCT-TSEEEEESCCSHHHHHHHH---HHTCSCEEESSCC
T ss_pred ECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCc-CCEEeeCEEEEHHHHHHHH---HcCCCEEEcCCCC
Confidence 445555544433322 35666667655432211 111222332 1111223355667777765 5699999988777
Q ss_pred HHHHH
Q 018935 193 VKAVL 197 (348)
Q Consensus 193 ~~~v~ 197 (348)
++-+.
T Consensus 99 ~~v~~ 103 (214)
T 1wbh_A 99 EPLLK 103 (214)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 269
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=29.19 E-value=45 Score=24.93 Aligned_cols=81 Identities=9% Similarity=0.097 Sum_probs=45.0
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc----CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecC
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ----GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE 191 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q----~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~ 191 (348)
...+.++....... ...+.+|++..-.. ..--.++..+. .....++...... +......+++.|+++++.+|-
T Consensus 36 ~~~~~~~a~~~l~~-~~~dlii~d~~l~~-~~g~~~~~~l~~~~~~~~~pii~~s~~~-~~~~~~~~~~~g~~~~l~kp~ 112 (142)
T 3cg4_A 36 SADSGGQCIDLLKK-GFSGVVLLDIMMPG-MDGWDTIRAILDNSLEQGIAIVMLTAKN-APDAKMIGLQEYVVDYITKPF 112 (142)
T ss_dssp EESSHHHHHHHHHT-CCCEEEEEESCCSS-SCHHHHHHHHHHTTCCTTEEEEEEECTT-CCCCSSTTGGGGEEEEEESSC
T ss_pred EeCCHHHHHHHHHh-cCCCEEEEeCCCCC-CCHHHHHHHHHhhcccCCCCEEEEECCC-CHHHHHHHHhcCccEEEeCCC
Confidence 34555443332221 24567777543222 22223344432 2345666655543 234556788999999999999
Q ss_pred CHHHHHHH
Q 018935 192 DVKAVLAL 199 (348)
Q Consensus 192 d~~~v~~l 199 (348)
+++++.+.
T Consensus 113 ~~~~l~~~ 120 (142)
T 3cg4_A 113 DNEDLIEK 120 (142)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 98877553
No 270
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=29.15 E-value=1.6e+02 Score=21.00 Aligned_cols=63 Identities=6% Similarity=0.079 Sum_probs=38.1
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..+.++++..-.. ..--.++..+. .....++......+.. ..+++.|+++.+.+|-+++++..
T Consensus 45 ~~dlvl~D~~l~~-~~g~~~~~~l~~~~~~~~ii~~s~~~~~~---~~~~~~g~~~~l~Kp~~~~~l~~ 109 (116)
T 3a10_A 45 NYDLVILDIEMPG-ISGLEVAGEIRKKKKDAKIILLTAYSHYR---SDMSSWAADEYVVKSFNFDELKE 109 (116)
T ss_dssp CCSEEEECSCCSS-SCHHHHHHHHHHHCTTCCEEEEESCGGGG---GCGGGGGSSEEEECCSSTHHHHH
T ss_pred CCCEEEEECCCCC-CCHHHHHHHHHccCCCCeEEEEECCcchH---HHHHhccccceEECCCCHHHHHH
Confidence 4577777443211 12223333332 2345677666655443 67889999999999999887654
No 271
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=28.39 E-value=2.1e+02 Score=23.97 Aligned_cols=109 Identities=11% Similarity=0.110 Sum_probs=56.1
Q ss_pred CchhHHHHHHHhCCcEE--EEcCcc--------hhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhc
Q 018935 58 ESKQVMTAAVERGWNTF--VFLSEN--------QQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQ 127 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~--v~~~~~--------~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~ 127 (348)
.-.+.+..+.+.|+|.+ .+-+.+ .+.++++.+. -+.++-+-+.+.++++.-+.+
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~----------------~~~~~~v~l~v~d~~~~i~~~ 80 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH----------------SKLVFDCHLMVVDPERYVEAF 80 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT----------------CCSEEEEEEESSSGGGGHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh----------------CCCCEEEEEeecCHHHHHHHH
Confidence 44678899999999973 321111 2333333322 123344445667765322333
Q ss_pred cccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEc--CCHHHHHHHHHHhhcccCeEEE
Q 018935 128 PADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAIS--KTPSEAQIFLEALEQGLGGIVL 188 (348)
Q Consensus 128 ~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v--~~~~eA~~al~~LE~G~DGVvl 188 (348)
... .++.+.+....-.- ++.++.++.+.+.++...+ ++..|+ +..++.++|-|++
T Consensus 81 ~~~-gad~v~vh~~~~~~--~~~~~~~~~~~g~~i~~~~~~~t~~e~---~~~~~~~~d~vl~ 137 (220)
T 2fli_A 81 AQA-GADIMTIHTESTRH--IHGALQKIKAAGMKAGVVINPGTPATA---LEPLLDLVDQVLI 137 (220)
T ss_dssp HHH-TCSEEEEEGGGCSC--HHHHHHHHHHTTSEEEEEECTTSCGGG---GGGGTTTCSEEEE
T ss_pred HHc-CCCEEEEccCcccc--HHHHHHHHHHcCCcEEEEEcCCCCHHH---HHHHHhhCCEEEE
Confidence 323 57888887654322 2334444443344666666 444443 3344566777755
No 272
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=27.31 E-value=27 Score=33.89 Aligned_cols=61 Identities=18% Similarity=0.254 Sum_probs=38.3
Q ss_pred CCCCCCCCeeeec------CCceeEEEe-----c--------CCceeeeeeccCCCeEEEEc-CCCCeeEEeeeeEEeec
Q 018935 265 SNYIASRPFRVNA------GPVHAYVLV-----P--------GGKTCYLSELKSGKEVIVVD-QKGRQRTAVVGRVKIES 324 (348)
Q Consensus 265 s~Yva~RPFRVNA------GaVHaYv~~-----p--------ggkT~YLSEL~aG~eVLvVd-~~G~tR~~~VGRvKIE~ 324 (348)
.|...+|||-+-- |-+|=.|.+ | |.-|+||++|+.||.|.+-- ..|.-+.- .-..
T Consensus 205 lp~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~Gd~v~v~~~~~g~F~lp-----~~~~ 279 (435)
T 1f20_A 205 LSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADDVVPCFVRGAPSFHLP-----RNPQ 279 (435)
T ss_dssp SCBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCTTCEEEEEEECCTTSSCC-----SCTT
T ss_pred CCCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCCCCEEEEEEecCCCccCC-----CCCC
Confidence 3455667766532 445554443 3 44589999999999999876 45554311 0125
Q ss_pred cceeEE
Q 018935 325 RPLILV 330 (348)
Q Consensus 325 RPLlLI 330 (348)
+|++||
T Consensus 280 ~piilI 285 (435)
T 1f20_A 280 VPCILV 285 (435)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 889887
No 273
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=27.17 E-value=33 Score=30.05 Aligned_cols=63 Identities=14% Similarity=0.065 Sum_probs=35.1
Q ss_pred CCCCeEEEeCCCCeeeehhhhhhcccCCCce--EEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHH
Q 018935 131 GQAENIVIDLPDWQVIPAENIVASFQGSGKT--VFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALK 200 (348)
Q Consensus 131 ~~~~~vvv~~~DW~iIPlENliA~~q~~~~~--l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~ 200 (348)
+..+.+-+..++.. ....++.+.. +.. -+..+-+.++++.+ ++.|+|||++...|.+-++..+
T Consensus 37 gGv~~iel~~k~~~---~~~~i~~~~~-~~~~~gag~vl~~d~~~~A---~~~GAd~v~~~~~d~~v~~~~~ 101 (207)
T 2yw3_A 37 EGVGALEITLRTEK---GLEALKALRK-SGLLLGAGTVRSPKEAEAA---LEAGAAFLVSPGLLEEVAALAQ 101 (207)
T ss_dssp TTCCEEEEECSSTH---HHHHHHHHTT-SSCEEEEESCCSHHHHHHH---HHHTCSEEEESSCCHHHHHHHH
T ss_pred cCCCEEEEeCCChH---HHHHHHHHhC-CCCEEEeCeEeeHHHHHHH---HHcCCCEEEcCCCCHHHHHHHH
Confidence 34666666655443 2344554444 221 12223355777766 4569999998877765444433
No 274
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=27.10 E-value=12 Score=32.94 Aligned_cols=39 Identities=18% Similarity=0.368 Sum_probs=29.5
Q ss_pred cCC-ceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEE
Q 018935 287 PGG-KTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 287 pgg-kT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
++| -|+||.+|+.||+|.+-...|+... .-..+|++||=
T Consensus 124 ~~G~~S~~l~~l~~Gd~v~v~gP~G~f~~------~~~~~~~vlia 163 (290)
T 2r6h_A 124 KPGISSSYIFSLKPGDKVMMSGPYGDFHI------QDTDAEMLYIG 163 (290)
T ss_dssp CCCHHHHHHTTCCTTCEEEEEEEECCCCC------CSSSCEEEEEE
T ss_pred CCcchhhHHhcCCCCCEEEEEecccCCcC------CCCCCeEEEEE
Confidence 344 5899999999999999888887642 12457888873
No 275
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=27.10 E-value=2.9e+02 Score=23.51 Aligned_cols=111 Identities=10% Similarity=0.069 Sum_probs=59.3
Q ss_pred CchhHHHHHHHhCCcEEEEc-------Cc---chhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhc
Q 018935 58 ESKQVMTAAVERGWNTFVFL-------SE---NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQ 127 (348)
Q Consensus 58 ~~K~~vT~ALEsG~~~~v~~-------~~---~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~ 127 (348)
.-.+.+..+.+.|+|.+=+. +. ..+.++++.+.. +..+.+.+.+.++++.-..+
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~----------------~~~~~v~l~vnd~~~~v~~~ 87 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT----------------DLPLDVHLMIVEPDQRVPDF 87 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC----------------CSCEEEEEESSSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc----------------CCcEEEEEEecCHHHHHHHH
Confidence 45788999999999965443 11 023444443321 22333445667765322223
Q ss_pred cccCCCCeEEEeCC--CCeeeehhhhhhcccCCCceEEEEc--CCHHHHHHHHHHhhcccCeEEEec
Q 018935 128 PADGQAENIVIDLP--DWQVIPAENIVASFQGSGKTVFAIS--KTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 128 ~~~~~~~~vvv~~~--DW~iIPlENliA~~q~~~~~l~a~v--~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
.. ..++.+.+... ...- ++.++.++.+.+.++...+ .+..|+ +..+..|+|-|++.+
T Consensus 88 ~~-~Gad~v~vh~~~~~~~~--~~~~~~~~~~~g~~ig~~~~p~t~~e~---~~~~~~~~d~vl~~~ 148 (230)
T 1rpx_A 88 IK-AGADIVSVHCEQSSTIH--LHRTINQIKSLGAKAGVVLNPGTPLTA---IEYVLDAVDLVLIMS 148 (230)
T ss_dssp HH-TTCSEEEEECSTTTCSC--HHHHHHHHHHTTSEEEEEECTTCCGGG---GTTTTTTCSEEEEES
T ss_pred HH-cCCCEEEEEecCccchh--HHHHHHHHHHcCCcEEEEeCCCCCHHH---HHHHHhhCCEEEEEE
Confidence 33 36788888776 4321 2455666544444555555 344443 233446788775443
No 276
>2pcn_A S-adenosylmethionine:2-demethylmenaquinone methyltransferase; beta, beta alpha domain; 1.90A {Geobacillus kaustophilus}
Probab=27.01 E-value=18 Score=31.17 Aligned_cols=27 Identities=41% Similarity=0.642 Sum_probs=23.4
Q ss_pred eeeeeccCCCeEEEEcCCCCeeEEeeee
Q 018935 292 CYLSELKSGKEVIVVDQKGRQRTAVVGR 319 (348)
Q Consensus 292 ~YLSEL~aG~eVLvVd~~G~tR~~~VGR 319 (348)
.+|.++..|| ||++|..|..+.+++|-
T Consensus 48 ~al~~~~~G~-VlVvd~~g~~~~a~~G~ 74 (161)
T 2pcn_A 48 EALETVPPGT-VLVVDGKGSRRVALLGD 74 (161)
T ss_dssp HHHHHSCTTC-EEEEECTTCCSSEEECH
T ss_pred HHHHhcCCCC-EEEEECCCCCCceeehH
Confidence 4788999995 99999999999998884
No 277
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=26.94 E-value=32 Score=30.44 Aligned_cols=62 Identities=11% Similarity=0.074 Sum_probs=40.2
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 018935 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (348)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~ 201 (348)
.+.+-+ ++..++-+.++++++..+-++++ .+++.++++.. .++.|+|||+ |++|+.+.++.+
T Consensus 171 ~~~i~~---~~~~~~~~~~v~~~~~~G~~v~~wTvn~~~~~~~~--l~~~GvdgIi--TD~p~~~~~~~~ 233 (248)
T 1zcc_A 171 ASIIEI---TPAQMRRPGIIEASRKAGLEIMVYYGGDDMAVHRE--IATSDVDYIN--LDRPDLFAAVRS 233 (248)
T ss_dssp CSEEEE---CHHHHHSHHHHHHHHHHTCEEEEECCCCCHHHHHH--HHHSSCSEEE--ESCHHHHHHHHH
T ss_pred CCEEEe---cHHHhCCHHHHHHHHHCCCEEEEECCCCHHHHHHH--HHHcCCCEEE--ECCHHHHHHHHH
Confidence 444444 55666335677777665556555 36777776651 4689999977 788987766544
No 278
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=26.34 E-value=1.5e+02 Score=24.16 Aligned_cols=70 Identities=10% Similarity=0.265 Sum_probs=37.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEec---CCHHHHHHHHHhh
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKV---EDVKAVLALKEYF 203 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~---~d~~~v~~l~~~~ 203 (348)
..|-++++..-+. ..--.++.++. .....+...+.+.. ......+++.|+|+++.+| +....+..+.+.+
T Consensus 25 ~~dlvl~D~~~p~-~~g~~~~~~l~~~~~~~~i~vi~~~~~-~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~ 99 (237)
T 3cwo_X 25 KPDIVTMDITMPE-MNGIDAIKEIMKIDPNAKIIVCSAMGQ-QAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTF 99 (237)
T ss_dssp CCSCEEEECCSTT-SSHHHHHHHHHHHSSSCCEEEECCSST-HHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHHhCCCCCEEEEECCCC-HHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHh
Confidence 4577777543221 11223344321 11223433333322 5566788999999999998 5555555555554
No 279
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=26.34 E-value=1.1e+02 Score=25.68 Aligned_cols=28 Identities=7% Similarity=0.114 Sum_probs=19.0
Q ss_pred HHHHHHhhcccCeEEEecCCHHHHH-HHH
Q 018935 173 QIFLEALEQGLGGIVLKVEDVKAVL-ALK 200 (348)
Q Consensus 173 ~~al~~LE~G~DGVvl~~~d~~~v~-~l~ 200 (348)
+..-..+++++|||++.+.+.+.+. .++
T Consensus 55 ~~~~~l~~~~~dgiIi~~~~~~~~~~~l~ 83 (277)
T 3e61_A 55 GYLATFVSHNCTGMISTAFNENIIENTLT 83 (277)
T ss_dssp HHHHHHHHTTCSEEEECGGGHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEecCChHHHHHHHH
Confidence 3444456899999999997666554 443
No 280
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=26.16 E-value=67 Score=25.89 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=38.0
Q ss_pred CCCeEEEeCCCCe--eeehhhhhhcccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQ--VIPAENIVASFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~--iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..|.++++..-+. -+ +...+.... ....++...... +...+..+++.|++|.+.+|-++.++..
T Consensus 52 ~~dlvl~D~~mp~~~g~-l~~~~~~~~-~~~~ii~lt~~~-~~~~~~~a~~~ga~~~l~KP~~~~~L~~ 117 (196)
T 1qo0_D 52 PVDVVFTSIFQNRHHDE-IAALLAAGT-PRTTLVALVEYE-SPAVLSQIIELECHGVITQPLDAHRVLP 117 (196)
T ss_dssp CCSEEEEECCSSTHHHH-HHHHHHHSC-TTCEEEEEECCC-SHHHHHHHHHHTCSEEEESSCCGGGHHH
T ss_pred CCCEEEEeCCCCccchH-HHHHHhccC-CCCCEEEEEcCC-ChHHHHHHHHcCCCeeEecCcCHHHHHH
Confidence 4567777443211 11 333333321 345666555443 3346778899999999999999877654
No 281
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=26.01 E-value=73 Score=29.02 Aligned_cols=33 Identities=24% Similarity=0.056 Sum_probs=23.1
Q ss_pred cCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHHHH
Q 018935 166 SKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLALKE 201 (348)
Q Consensus 166 v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~ 201 (348)
+-+.++|+. +++.|+|.|+....|++-++..++
T Consensus 93 Vlt~~~a~~---Ai~AGA~fIvsP~~~~~vi~~~~~ 125 (232)
T 4e38_A 93 ILNGEQALA---AKEAGATFVVSPGFNPNTVRACQE 125 (232)
T ss_dssp CCSHHHHHH---HHHHTCSEEECSSCCHHHHHHHHH
T ss_pred cCCHHHHHH---HHHcCCCEEEeCCCCHHHHHHHHH
Confidence 456666665 556799999988877776655444
No 282
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=25.90 E-value=61 Score=28.96 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=26.5
Q ss_pred HHHHHHHhhcccCeEEEecCCHHHHHHHHHhh
Q 018935 172 AQIFLEALEQGLGGIVLKVEDVKAVLALKEYF 203 (348)
Q Consensus 172 A~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~ 203 (348)
-+.+-.+.+.|+||+|..+..|++++.+++.+
T Consensus 125 ~~~a~~a~~~g~~GvV~sat~p~e~~~ir~~~ 156 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGTKLDHITQYRRDF 156 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCEEEECCCCHHHHHHHHHhC
Confidence 45666677899999999998899998888765
No 283
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=25.72 E-value=83 Score=31.23 Aligned_cols=55 Identities=11% Similarity=0.150 Sum_probs=34.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCC--CceEEE-EcCCHHHHHHHHHHhhcccCeEEEe
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGS--GKTVFA-ISKTPSEAQIFLEALEQGLGGIVLK 189 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~ 189 (348)
.++.++++.....--.+.++|.++... +..|++ .+.+.++|+.+. +.|+|+|++.
T Consensus 243 G~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~---~aGaD~I~Vg 300 (496)
T 4fxs_A 243 GVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALI---EAGVSAVKVG 300 (496)
T ss_dssp TCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHH---HHTCSEEEEC
T ss_pred cCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHH---HhCCCEEEEC
Confidence 688899987754322233444444322 234544 588888887664 6799999984
No 284
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=25.63 E-value=2.3e+02 Score=26.62 Aligned_cols=111 Identities=14% Similarity=0.135 Sum_probs=64.4
Q ss_pred chhHHHHHHHhCCcEEEEcCc--chhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhccccCCCCeE
Q 018935 59 SKQVMTAAVERGWNTFVFLSE--NQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQPADGQAENI 136 (348)
Q Consensus 59 ~K~~vT~ALEsG~~~~v~~~~--~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~~~~~~~~~v 136 (348)
+.-.|-.|-..|+|+|+.--. +.+..+++-.++. .-|-. ++++|-+.++++.+... .++.+
T Consensus 115 d~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~-------------~lGl~--~LvEVh~~~El~rAl~~--~a~iI 177 (258)
T 4a29_A 115 KESQIDDAYNLGADTVLLIVKILTERELESLLEYAR-------------SYGME--PLILINDENDLDIALRI--GARFI 177 (258)
T ss_dssp SHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHH-------------HTTCC--CEEEESSHHHHHHHHHT--TCSEE
T ss_pred cHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHH-------------HHhHH--HHHhcchHHHHHHHhcC--CCcEE
Confidence 456677888899999875321 1112222222211 11222 57899999998886543 45667
Q ss_pred EEeCCCCe--eeeh---hhhhhcccCCCceEEE--EcCCHHHHHHHHHHhhcccCeEEEec
Q 018935 137 VIDLPDWQ--VIPA---ENIVASFQGSGKTVFA--ISKTPSEAQIFLEALEQGLGGIVLKV 190 (348)
Q Consensus 137 vv~~~DW~--iIPl---ENliA~~q~~~~~l~a--~v~~~~eA~~al~~LE~G~DGVvl~~ 190 (348)
=|+-+|-+ -+-+ ++|...+. .+.-+++ ..++.+|++.+ .+.|+||+|+-.
T Consensus 178 GINNRnL~tf~vdl~~t~~L~~~ip-~~~~~VsESGI~t~~dv~~l---~~~G~~a~LVGe 234 (258)
T 4a29_A 178 GIMSRDFETGEINKENQRKLISMIP-SNVVKVAKLGISERNEIEEL---RKLGVNAFLISS 234 (258)
T ss_dssp EECSBCTTTCCBCHHHHHHHHTTSC-TTSEEEEEESSCCHHHHHHH---HHTTCCEEEECH
T ss_pred EEeCCCccccccCHHHHHHHHhhCC-CCCEEEEcCCCCCHHHHHHH---HHCCCCEEEECH
Confidence 67766543 1223 33444332 2334455 45688887765 578999999853
No 285
>1gz0_A Hypothetical tRNA/RRNA methyltransferase YJFH; 2'O-methyltransferase, knot, montreal- kingston bacterial structural genomics initiative, BSGI; 2.5A {Escherichia coli} SCOP: c.116.1.1 d.79.3.3
Probab=25.46 E-value=1.6e+02 Score=26.53 Aligned_cols=121 Identities=14% Similarity=0.194 Sum_probs=56.4
Q ss_pred CCCcEEEEEeCchhHHHHHHHhCC---cEEEEcCcchhh-hhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhh
Q 018935 48 SKPKRVWIWTESKQVMTAAVERGW---NTFVFLSENQQL-AIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQEL 123 (348)
Q Consensus 48 ~~~K~vWiw~~~K~~vT~ALEsG~---~~~v~~~~~~e~-~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~ 123 (348)
++...+||+- +..|..||++|. ..+++.++..+. .+++-+. ....|. -+...+++.+
T Consensus 8 ~~~~~~~veG--~~~V~eal~~~~~~i~~l~~~~~~~~~~~~~l~~~-------------~~~~~i----~v~~v~~~~l 68 (253)
T 1gz0_A 8 GSHMSEMIYG--IHAVQALLERAPERFQEVFILKGREDKRLLPLIHA-------------LESQGV----VIQLANRQYL 68 (253)
T ss_dssp ----CEEEES--HHHHHHHHHSCGGGEEEEEEESSCCCTTTHHHHHH-------------HHHHTC----EEEEECSHHH
T ss_pred CCCCcEEEEE--HHHHHHHHhcCCCCeEEEEEECCccchhHHHHHHH-------------HHHCCC----cEEEeCHHHH
Confidence 3444566665 999999999984 456666532110 1111110 001121 1233466777
Q ss_pred hhhccccCCCCeEEEeCCCCeee---ehhhhhhcccCCCceEEEE---cCCHHHHHHHHH-HhhcccCeEEEecC
Q 018935 124 QQLQPADGQAENIVIDLPDWQVI---PAENIVASFQGSGKTVFAI---SKTPSEAQIFLE-ALEQGLGGIVLKVE 191 (348)
Q Consensus 124 e~~~~~~~~~~~vvv~~~DW~iI---PlENliA~~q~~~~~l~a~---v~~~~eA~~al~-~LE~G~DGVvl~~~ 191 (348)
+.++......+ ++......+.. +++.++... +..++.. +.|+.-.-..+. +---|+|+|++...
T Consensus 69 ~~ls~~~~~qG-v~a~~~~~~~~~~~~l~~~~~~~---~~~~~lvLd~v~dp~NlGaI~Rta~a~G~~~vil~~~ 139 (253)
T 1gz0_A 69 DEKSDGAVHQG-IIARVKPGRQYQENDLPDLIASL---DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKD 139 (253)
T ss_dssp HHTTTSCCCTT-EEEEECCCCCCCGGGHHHHHHTC---SSCEEEEEESCCCHHHHHHHHHHHHHHTCSEEEEESS
T ss_pred HHHhCCCCCcE-EEEEEeccccCcHHHHHHHHhcc---CCCEEEEEeCCCCcCcHHHHHHHHHHhCCCEEEEeCC
Confidence 77765433333 33334433322 344443321 1233333 444443333332 33469999999765
No 286
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=25.43 E-value=2.9e+02 Score=22.96 Aligned_cols=71 Identities=11% Similarity=0.141 Sum_probs=42.8
Q ss_pred eecCCCCCCceEEEecc-CceEEEEeeccccCCCCCCCCeeeecC---CceeEEEecCCceeeeeeccCCCeEEEEcCCC
Q 018935 235 DLCSLMRPGEGLLVGSF-ARGLFLVHSECLESNYIASRPFRVNAG---PVHAYVLVPGGKTCYLSELKSGKEVIVVDQKG 310 (348)
Q Consensus 235 Dtcsll~~GEGmLVGS~-S~glFLVhsEt~es~Yva~RPFRVNAG---aVHaYv~~pggkT~YLSEL~aG~eVLvVd~~G 310 (348)
||.-.+.++.-++|-+. ...+.++..++... --+++.+ .+|+....|+|+.-|.+. .....|.++|.+.
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~------~~~~~~~~~~~~~~~~~s~dg~~~~v~~-~~~~~i~~~d~~t 74 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVASDTV------YKSCVMPDKFGPGTAMMAPDNRTAYVLN-NHYGDIYGIDLDT 74 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTTTEE------EEEEECSSCCSSCEEEECTTSSEEEEEE-TTTTEEEEEETTT
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCCCcE------EEEEecCCCCCCceeEECCCCCEEEEEe-CCCCcEEEEeCCC
Confidence 67777788777766554 44555555444221 1123333 367778889999888886 3446788888764
Q ss_pred Ce
Q 018935 311 RQ 312 (348)
Q Consensus 311 ~t 312 (348)
..
T Consensus 75 ~~ 76 (349)
T 1jmx_B 75 CK 76 (349)
T ss_dssp TE
T ss_pred Cc
Confidence 33
No 287
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=25.42 E-value=47 Score=27.34 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=44.7
Q ss_pred EecChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDV 193 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~ 193 (348)
...+.++.-.... ....|.++++..-+..=.+ .++..+. .....++......+ ......+++.|++|++.+|-++
T Consensus 36 ~~~~~~~a~~~~~-~~~~dlvllD~~l~~~~g~-~~~~~l~~~~~~~~ii~lt~~~~-~~~~~~~~~~ga~~~l~Kp~~~ 112 (233)
T 1ys7_A 36 TAVDGAEALRSAT-ENRPDAIVLDINMPVLDGV-SVVTALRAMDNDVPVCVLSARSS-VDDRVAGLEAGADDYLVKPFVL 112 (233)
T ss_dssp EESSHHHHHHHHH-HSCCSEEEEESSCSSSCHH-HHHHHHHHTTCCCCEEEEECCCT-TTCCCTTTTTTCSEEEESSCCH
T ss_pred EECCHHHHHHHHH-hCCCCEEEEeCCCCCCCHH-HHHHHHHhcCCCCCEEEEEcCCC-HHHHHHHHHcCCCEEEeCCCCH
Confidence 3455544332222 1246777775543221112 2333332 23455665544332 3345678899999999999999
Q ss_pred HHHHHH
Q 018935 194 KAVLAL 199 (348)
Q Consensus 194 ~~v~~l 199 (348)
+++.+.
T Consensus 113 ~~L~~~ 118 (233)
T 1ys7_A 113 AELVAR 118 (233)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 288
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=25.31 E-value=76 Score=24.23 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=27.1
Q ss_pred ceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHHH
Q 018935 160 KTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLAL 199 (348)
Q Consensus 160 ~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~l 199 (348)
..++....+. +......+++.|+++.+.+|-+++++.+.
T Consensus 91 ~pii~~s~~~-~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~ 129 (143)
T 3m6m_D 91 TPVVVLSADV-TPEAIRACEQAGARAFLAKPVVAAKLLDT 129 (143)
T ss_dssp CCEEEEESCC-CHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CeEEEEeCCC-CHHHHHHHHHcChhheeeCCCCHHHHHHH
Confidence 3455544432 23445678899999999999999877653
No 289
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=25.16 E-value=56 Score=26.88 Aligned_cols=40 Identities=28% Similarity=0.337 Sum_probs=29.0
Q ss_pred CceEEEEcCCHHHHHHHHHHhhcccCeEEEecC-CHHHHHHH
Q 018935 159 GKTVFAISKTPSEAQIFLEALEQGLGGIVLKVE-DVKAVLAL 199 (348)
Q Consensus 159 ~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~-d~~~v~~l 199 (348)
...++...... +......+++.|++|.+.+|- +++++.+.
T Consensus 68 ~~~ii~lt~~~-~~~~~~~~~~~Ga~~~l~Kp~~~~~~L~~~ 108 (223)
T 2hqr_A 68 SIVVLVSSDNP-TSEEEVHAFEQGADDYIAKPYRSIKALVAR 108 (223)
T ss_dssp TSEEEEEESSC-CHHHHHHHHHHTCSEEEETTCSCTHHHHHH
T ss_pred CCcEEEEECCC-CHHHHHHHHHcCCCEEEECCCCCHHHHHHH
Confidence 45666555443 345667888999999999999 98877553
No 290
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=24.96 E-value=2.5e+02 Score=26.32 Aligned_cols=30 Identities=23% Similarity=0.391 Sum_probs=25.3
Q ss_pred CCceeeeeecc-CCCeEEEEcCCCCeeEEee
Q 018935 288 GGKTCYLSELK-SGKEVIVVDQKGRQRTAVV 317 (348)
Q Consensus 288 ggkT~YLSEL~-aG~eVLvVd~~G~tR~~~V 317 (348)
-|....|.|+= -|+++||++..|+.|.+-.
T Consensus 158 ~Gev~tv~E~l~d~~R~lV~~~~~eerVv~l 188 (251)
T 3m9b_A 158 VGEISTLREILADGHRALVVGHADEERVVWL 188 (251)
T ss_dssp CSEEEEEEEECTTSSEEEEECSSSCEEEEEC
T ss_pred cccEEEEEEEecCCCEEEEecCCCceEEEEe
Confidence 46678889988 6689999999999998864
No 291
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=24.87 E-value=98 Score=23.47 Aligned_cols=65 Identities=12% Similarity=0.077 Sum_probs=34.3
Q ss_pred CCCeEEEeCCCCeeeehhhhhhccc--CCCceEEEEcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQ--GSGKTVFAISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q--~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
..+.++++..-+. +.--.++..+. .....++...... +...+..+++.|+++.+.+|-+++++.+
T Consensus 49 ~~dlvllD~~lp~-~~g~~l~~~l~~~~~~~~ii~ls~~~-~~~~~~~~~~~ga~~~l~KP~~~~~L~~ 115 (141)
T 3cu5_A 49 PPNVLLTDVRMPR-MDGIELVDNILKLYPDCSVIFMSGYS-DKEYLKAAIKFRAIRYVEKPIDPSEIMD 115 (141)
T ss_dssp CCSEEEEESCCSS-SCHHHHHHHHHHHCTTCEEEEECCST-TTCCC------CCCEEECSSCCHHHHHH
T ss_pred CCCEEEEeCCCCC-CCHHHHHHHHHhhCCCCcEEEEeCCC-cHHHHHHHHhCCccEEEeCCCCHHHHHH
Confidence 4677777543221 22223344332 2345666655443 3345667889999999999999987754
No 292
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=24.67 E-value=85 Score=27.51 Aligned_cols=36 Identities=11% Similarity=0.262 Sum_probs=0.0
Q ss_pred CCcEEEEEe-CchhHHHHHHHhCCcEEEEcCcchhhhhhc
Q 018935 49 KPKRVWIWT-ESKQVMTAAVERGWNTFVFLSENQQLAIDW 87 (348)
Q Consensus 49 ~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~~~e~~~~l 87 (348)
+.+.+|+|+ .+++.+...++. +|+|+.+. .+...++
T Consensus 197 ~G~~v~~wTvn~~~~~~~l~~~-vdgIiTD~--P~~~~~~ 233 (234)
T 1o1z_A 197 KGIVIFVWTLNDPEIYRKIRRE-IDGVITDE--VELFVKL 233 (234)
T ss_dssp TTCEEEEESCCCHHHHHHHGGG-CSEEEESC--HHHHHHT
T ss_pred cCCEEEEeCCCCHHHHHHHHHh-CCEEEcCC--HHHHhhc
No 293
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=24.30 E-value=19 Score=32.19 Aligned_cols=39 Identities=21% Similarity=0.367 Sum_probs=27.4
Q ss_pred CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEE
Q 018935 288 GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILV 330 (348)
Q Consensus 288 ggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLI 330 (348)
|--|+||++|+.||+|.+-...|+.-... .-..+|++||
T Consensus 116 G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~----~~~~~~~vlI 154 (304)
T 2bmw_A 116 GVCSTYLTHIEPGSEVKITGPVGKEMLLP----DDPEANVIML 154 (304)
T ss_dssp CHHHHHHHTCCTTCEEEEEEEECSSSCCC----SCTTCEEEEE
T ss_pred cchhhHHhcCCCCCEEEEEeccCCceeCC----CCCCCCEEEE
Confidence 33689999999999999987777542100 0125788887
No 294
>1nxj_A Probable S-adenosylmethionine:2- demethylmenaquinone methyltransferase; beta/BETA/alpha domain, structural genomics, PSI; HET: TLA; 1.90A {Mycobacterium tuberculosis} SCOP: c.8.7.1
Probab=24.28 E-value=23 Score=31.37 Aligned_cols=27 Identities=41% Similarity=0.607 Sum_probs=23.6
Q ss_pred eeeeeccCCCeEEEEcCCCCeeEEeeee
Q 018935 292 CYLSELKSGKEVIVVDQKGRQRTAVVGR 319 (348)
Q Consensus 292 ~YLSEL~aG~eVLvVd~~G~tR~~~VGR 319 (348)
.+|.+...|+ ||++|..|..+.+.+|-
T Consensus 79 ~al~~~~~G~-VlVvd~~g~~~~A~~G~ 105 (183)
T 1nxj_A 79 SVLSQPSAGG-VLVIDGAGSLHTALVGD 105 (183)
T ss_dssp HHHHSCCSSC-EEEEECTTCCSSEEECH
T ss_pred HHHHhcCCCC-EEEEECCCCCCceeeHH
Confidence 5888999995 99999999999998884
No 295
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=24.21 E-value=97 Score=29.58 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=32.5
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccC-CCceEEE-EcCCHHHHHHHHHHhhcccCeEEE
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQG-SGKTVFA-ISKTPSEAQIFLEALEQGLGGIVL 188 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~-~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl 188 (348)
.++.++|+...-.--.+.+.|.++.. .+..+++ .+.+.++|+.+ .+.|+|+|.+
T Consensus 117 Gad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l---~~aGaD~I~V 172 (361)
T 3khj_A 117 GVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKEL---IENGADGIKV 172 (361)
T ss_dssp TCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHH---HHTTCSEEEE
T ss_pred CcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHH---HHcCcCEEEE
Confidence 57888886542111112223332211 1456774 88999988765 4789999998
No 296
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=24.17 E-value=50 Score=32.73 Aligned_cols=65 Identities=12% Similarity=0.075 Sum_probs=40.6
Q ss_pred hhhhhhcccc-CCCCeEEEeCCCCeeeehhhhhhcccCC--CceEEEE-cCCHHHHHHHHHHhhcccCeEEE
Q 018935 121 QELQQLQPAD-GQAENIVIDLPDWQVIPAENIVASFQGS--GKTVFAI-SKTPSEAQIFLEALEQGLGGIVL 188 (348)
Q Consensus 121 ed~e~~~~~~-~~~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~a~-v~~~~eA~~al~~LE~G~DGVvl 188 (348)
++++.+.... ..++.++++...-.--.+.++|.++... +..|++. +.+.++|+. +.+.|+|+|.+
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~---l~~aGaD~I~v 297 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKA---LAEAGADAVKV 297 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHH---HHHTTCSEEEE
T ss_pred chHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHH---HHHcCCCEEEE
Confidence 4444444433 3688999987754433444555554432 2355554 888888766 45789999998
No 297
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=24.11 E-value=1.7e+02 Score=25.13 Aligned_cols=93 Identities=19% Similarity=0.213 Sum_probs=49.9
Q ss_pred eEEEEEecCh--hhhhhhcc--ccCCCCeEEEe------CCCCeeee---------------hhhhhhcccCC-CceEEE
Q 018935 111 VGSIIEVSTP--QELQQLQP--ADGQAENIVID------LPDWQVIP---------------AENIVASFQGS-GKTVFA 164 (348)
Q Consensus 111 v~~~~~v~~~--ed~e~~~~--~~~~~~~vvv~------~~DW~iIP---------------lENliA~~q~~-~~~l~a 164 (348)
+..++.-.++ ++..+.+. ..+ +|++-+. ..|-..|| .-.+|.++... +..|..
T Consensus 7 ~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~ 85 (248)
T 1geq_A 7 LIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVL 85 (248)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEE
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEE
Confidence 3445555555 33333322 223 8888887 44555555 13344444332 233444
Q ss_pred EcC-CHH----HHHHHHHHhhcccCeEEEecCCHHHHHHHHHhhc
Q 018935 165 ISK-TPS----EAQIFLEALEQGLGGIVLKVEDVKAVLALKEYFD 204 (348)
Q Consensus 165 ~v~-~~~----eA~~al~~LE~G~DGVvl~~~d~~~v~~l~~~~~ 204 (348)
... +.- ..+.+-.+++.|+|||++....+.+..++.+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~ 130 (248)
T 1geq_A 86 MTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAR 130 (248)
T ss_dssp EECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHH
T ss_pred EeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHH
Confidence 432 330 0233445567899999999877776666665553
No 298
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=23.72 E-value=2.5e+02 Score=26.52 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=43.7
Q ss_pred EecChhhhhhhccccCCCCeEEEeCC-----------CCeeee----hhhhhhcccCCCceEEE--EcCCHHHHHHHHHH
Q 018935 116 EVSTPQELQQLQPADGQAENIVIDLP-----------DWQVIP----AENIVASFQGSGKTVFA--ISKTPSEAQIFLEA 178 (348)
Q Consensus 116 ~v~~~ed~e~~~~~~~~~~~vvv~~~-----------DW~iIP----lENliA~~q~~~~~l~a--~v~~~~eA~~al~~ 178 (348)
.+.++++...+.. . .+|.+++... +|- +| |..+.+..+..+..||+ -+.+..|+. .+
T Consensus 168 ~v~t~e~A~~a~~-a-GaD~I~v~~g~G~~~~~r~~~g~~-~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~---kA 241 (351)
T 2c6q_A 168 NVVTGEMVEELIL-S-GADIIKVGIGPGSVCTTRKKTGVG-YPQLSAVMECADAAHGLKGHIISDGGCSCPGDVA---KA 241 (351)
T ss_dssp EECSHHHHHHHHH-T-TCSEEEECSSCSTTBCHHHHHCBC-CCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHH---HH
T ss_pred eCCCHHHHHHHHH-h-CCCEEEECCCCCcCcCccccCCCC-ccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHH---HH
Confidence 5778887544432 2 5788877421 222 33 23343333333567888 788887765 56
Q ss_pred hhcccCeEEEecC
Q 018935 179 LEQGLGGIVLKVE 191 (348)
Q Consensus 179 LE~G~DGVvl~~~ 191 (348)
|..|+|+|.+-+.
T Consensus 242 lalGA~~V~vG~~ 254 (351)
T 2c6q_A 242 FGAGADFVMLGGM 254 (351)
T ss_dssp HHTTCSEEEESTT
T ss_pred HHcCCCceeccHH
Confidence 7789999998875
No 299
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=23.37 E-value=2.8e+02 Score=26.26 Aligned_cols=72 Identities=11% Similarity=0.051 Sum_probs=49.2
Q ss_pred CCCeEEEeCCCC----------eeeehhhhhhcc---------cCCCceEEEEcCCH-----HHHH-HHHHHhhcccCeE
Q 018935 132 QAENIVIDLPDW----------QVIPAENIVASF---------QGSGKTVFAISKTP-----SEAQ-IFLEALEQGLGGI 186 (348)
Q Consensus 132 ~~~~vvv~~~DW----------~iIPlENliA~~---------q~~~~~l~a~v~~~-----~eA~-~al~~LE~G~DGV 186 (348)
.+.-+-|+...| +++|.|..++.+ .+.+.-|+|..... +||- -+.--.|.|+|+|
T Consensus 116 Gaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~i 195 (307)
T 3lye_A 116 GVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVG 195 (307)
T ss_dssp TCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEE
T ss_pred CCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEE
Confidence 456677777766 389998866544 14456788887764 3443 3344478999999
Q ss_pred EEec-CCHHHHHHHHHhh
Q 018935 187 VLKV-EDVKAVLALKEYF 203 (348)
Q Consensus 187 vl~~-~d~~~v~~l~~~~ 203 (348)
.+.. .|+++++++.+.+
T Consensus 196 fi~~~~~~~~~~~i~~~~ 213 (307)
T 3lye_A 196 LLEGFRSKEQAAAAVAAL 213 (307)
T ss_dssp EECCCSCHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHc
Confidence 9864 5788888877765
No 300
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=23.32 E-value=33 Score=32.93 Aligned_cols=38 Identities=26% Similarity=0.442 Sum_probs=25.7
Q ss_pred CCceeeeeeccCCCeEEE-E-cCCCCeeEEeeeeEEeeccceeEE
Q 018935 288 GGKTCYLSELKSGKEVIV-V-DQKGRQRTAVVGRVKIESRPLILV 330 (348)
Q Consensus 288 ggkT~YLSEL~aG~eVLv-V-d~~G~tR~~~VGRvKIE~RPLlLI 330 (348)
|--|+||++|+.||.|-+ | ...|.-+.-. -..+|++||
T Consensus 207 G~~S~~L~~l~~Gd~v~v~v~~P~g~F~lp~-----~~~~piImI 246 (393)
T 4dql_A 207 GIASNYLAELQEGDTITCFISTPQSEFTLPK-----DPETPLIMV 246 (393)
T ss_dssp CHHHHHHHHCCTTCEEEEEEECCSSCCCCCS-----STTSCEEEE
T ss_pred CccchhHHhCCCcCEEEEEEEcCCCCcccCc-----cCCCCeEEE
Confidence 446899999999999985 3 4566543210 125788887
No 301
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=23.22 E-value=22 Score=32.41 Aligned_cols=39 Identities=18% Similarity=0.265 Sum_probs=28.7
Q ss_pred cCCc--eeeee-eccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEE
Q 018935 287 PGGK--TCYLS-ELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 287 pggk--T~YLS-EL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
|+|+ |+||. .|+.||+|.+-...|....- -..+|++||=
T Consensus 77 ~~G~g~S~~L~~~l~~Gd~v~v~gP~g~f~l~------~~~~~~vlia 118 (321)
T 2pia_A 77 SNGRGGSISFIDDTSEGDAVEVSLPRNEFPLD------KRAKSFILVA 118 (321)
T ss_dssp TTSCSHHHHHHHSCCTTCEEEECCCBCCSCCC------TTCSEEEEEE
T ss_pred cCCcchhHHHHhcCCCCCEEEEeCCccccccC------CCCCCEEEEE
Confidence 6665 99999 89999999998877754211 1257888873
No 302
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=22.97 E-value=1.1e+02 Score=22.51 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=27.2
Q ss_pred eccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEE
Q 018935 296 ELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 296 EL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
.++.|.++-++|..+..+.|+|-.|+... ..++|.
T Consensus 12 ~F~vGmkLEa~d~~~p~~~AtV~~v~~~~-~~~~Vh 46 (69)
T 3sd4_A 12 SFEVGAQLEARDRLKNWYPAHIEDIDYEE-GKVLIH 46 (69)
T ss_dssp CCSTTCEEEEECTTSCEEEEEEEEEETTT-TEEEEE
T ss_pred CcCCCCEEEEEECCCCccccEEEEEeccC-CEEEEE
Confidence 47889999999999999999998886433 334543
No 303
>3sjy_A Translation initiation factor 2 subunit gamma; zinc finger, initiate translation, tRNA binding, mRNA bindin binding; HET: GCP GDP; 2.00A {Sulfolobus solfataricus P2} PDB: 3pen_A* 3sjz_A* 2qn6_A* 2aho_A 2qmu_A* 2plf_A* 3v11_A* 3i1f_A* 3cw2_A 2pmd_A* 3p3m_A* 3qsy_A*
Probab=22.80 E-value=1.5e+02 Score=27.71 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=38.3
Q ss_pred cCCCCCCCCeeeecCCceeEEEe--cCCceee--ee---eccCCC-eEEE-EcCCCCeeEEeeeeEEe
Q 018935 264 ESNYIASRPFRVNAGPVHAYVLV--PGGKTCY--LS---ELKSGK-EVIV-VDQKGRQRTAVVGRVKI 322 (348)
Q Consensus 264 es~Yva~RPFRVNAGaVHaYv~~--pggkT~Y--LS---EL~aG~-eVLv-Vd~~G~tR~~~VGRvKI 322 (348)
+.|..+.+++.++.|..|.-..+ .++...- |. -+..|| ++.+ -+-+++.|.+=.|.++|
T Consensus 336 ~~~l~~~~~~~~~~gt~~~~~~v~~~~~~~~~~~l~~p~~~~~g~~r~~i~r~~~~~~r~~g~g~i~~ 403 (403)
T 3sjy_A 336 VDPIRAKETLMLSVGSSTTLGIVTSVKKDEIEVELRRPVAVWSNNIRTVISRQIAGRWRMIGWGLVEI 403 (403)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEEEECSSEEEEEEEEEEECCSSSCEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCCCCCEEEEEECccEEEEEEEEecCceEEEEeCCcEeeccCCEEEEEEEEeCCcEEEEEEEEEEC
Confidence 45667778888999988866554 2332111 11 256688 7665 45677888888887775
No 304
>3nfg_A DNA-directed RNA polymerase I subunit RPA49; triple barrel, transcription, dimerization; 2.51A {Candida glabrata}
Probab=22.75 E-value=21 Score=29.30 Aligned_cols=27 Identities=26% Similarity=0.541 Sum_probs=21.5
Q ss_pred CceEEEeccCceE------------------EEEeeccccCCCCC
Q 018935 243 GEGLLVGSFARGL------------------FLVHSECLESNYIA 269 (348)
Q Consensus 243 GEGmLVGS~S~gl------------------FLVhsEt~es~Yva 269 (348)
.--+.|||+..|+ +|+|+||....|++
T Consensus 18 ~p~~~v~~f~pGl~~P~~t~F~lY~kk~~~e~lLhgEt~rLdY~g 62 (102)
T 3nfg_A 18 DPSVVVSNFFKGVRVPKDTEFQLYKKRKQDQFVLHGENERLEYDG 62 (102)
T ss_dssp SCCCEEEECCTTCCCCTTCEEEEEEECCCCCEEEEEECSSEEEEE
T ss_pred CCCEEEEeccCCccCCCCceeEeeecCCCcceEEEeCCCceEEEe
Confidence 4457889999888 89999997777854
No 305
>2eis_A Hypothetical protein TTHB207; COA binding motif, NPPSFA, national project on protein struc functional analyses; HET: COA; 2.10A {Thermus thermophilus}
Probab=22.51 E-value=89 Score=23.60 Aligned_cols=27 Identities=22% Similarity=0.224 Sum_probs=19.7
Q ss_pred CCceeeeeeccCCCeEEEEcCCCCeeEEeeee
Q 018935 288 GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGR 319 (348)
Q Consensus 288 ggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGR 319 (348)
....+|+.+++.||.|.+ +++..-+||
T Consensus 51 ~~~i~f~~pv~~gd~l~v-----~~~v~~~g~ 77 (133)
T 2eis_A 51 ADAVDFKRPVPLGAIVEL-----VARLKEVGR 77 (133)
T ss_dssp EEEEEECSCCBTTCEEEE-----EEEEEEECS
T ss_pred EccEEEcccccCCCEEEE-----EEEEEEeCC
Confidence 347899999999999887 344444444
No 306
>2ln7_A LPXTG-SITE transpeptidase family protein; sortase, sortase family D, enzyme, protein binding; NMR {Bacillus anthracis}
Probab=22.46 E-value=74 Score=26.50 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=22.0
Q ss_pred eeeeeeccCCCeEEEEcCCCCeeEEeeeeEEe
Q 018935 291 TCYLSELKSGKEVIVVDQKGRQRTAVVGRVKI 322 (348)
Q Consensus 291 T~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKI 322 (348)
-..|.+|+.||+|.+-+.++ +.+=.|-++++
T Consensus 70 F~~L~~l~~GD~i~v~~~~~-~~~Y~V~~~~v 100 (147)
T 2ln7_A 70 FTDLGQLKEKDTLVLEYDNK-TYTYEIQKIWI 100 (147)
T ss_dssp SSHHHHSSTTCEEEEEETTE-EEEEEEEEEEE
T ss_pred hhhhhcccCCCEEEEEECCc-EEEEEEEeEEE
Confidence 45699999999998876544 55555555554
No 307
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=22.20 E-value=1e+02 Score=31.27 Aligned_cols=37 Identities=11% Similarity=0.244 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhhcccCeEEEe-cCCHHHHHHHHHhhcc
Q 018935 169 PSEAQIFLEALEQGLGGIVLK-VEDVKAVLALKEYFDG 205 (348)
Q Consensus 169 ~~eA~~al~~LE~G~DGVvl~-~~d~~~v~~l~~~~~~ 205 (348)
..|..-...+|+.|+|||+++ .++++++.++++++..
T Consensus 193 ~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~ 230 (500)
T 1a3w_A 193 EKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGE 230 (500)
T ss_dssp HHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHh
Confidence 356677778899999999998 5789999999998854
No 308
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=21.83 E-value=36 Score=30.09 Aligned_cols=57 Identities=16% Similarity=0.326 Sum_probs=36.4
Q ss_pred CCeEEEeCCCCeeeehhhhhhcccCCCceEEE-EcCCHHHHHHHHHHhhcccCeEEEecCCHHHHHH
Q 018935 133 AENIVIDLPDWQVIPAENIVASFQGSGKTVFA-ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAVLA 198 (348)
Q Consensus 133 ~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a-~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v~~ 198 (348)
.+.+-. ++..+. +.+|++++..+-++++ .+++.++++.+ ++.|+|||+ ||+|+.+.+
T Consensus 189 ~~~i~~---~~~~~~-~~~v~~~~~~G~~v~~wTvn~~~~~~~l---~~~GvdgIi--TD~P~~~~~ 246 (252)
T 2pz0_A 189 AYSLHP---FYFNII-PELVEGCKKNGVKLFPWTVDRKEDMERM---IKAGVDGII--TDDPETLIN 246 (252)
T ss_dssp CSEEEE---BGGGCC-HHHHHHHHHTTCEECCBCCCSHHHHHHH---HHHTCSEEE--ESCHHHHHH
T ss_pred CeEEec---chhcCC-HHHHHHHHHCCCEEEEECCCCHHHHHHH---HHcCCCEEE--cCCHHHHHH
Confidence 444444 445554 5567777666656554 36777666654 678999977 788886654
No 309
>4e2u_A PHO RADA intein; HINT-fold, unknown function; 1.58A {Pyrococcus horikoshii} PDB: 2lqm_A 4e2t_A*
Probab=21.76 E-value=1.3e+02 Score=25.23 Aligned_cols=19 Identities=26% Similarity=0.282 Sum_probs=16.8
Q ss_pred ceeeeeeccCCCeEEEEcC
Q 018935 290 KTCYLSELKSGKEVIVVDQ 308 (348)
Q Consensus 290 kT~YLSEL~aG~eVLvVd~ 308 (348)
+....++|+.||.|++.+.
T Consensus 107 ~w~~a~~L~~Gd~l~~~~g 125 (168)
T 4e2u_A 107 QWVPAAEVKPGDVVVGVRN 125 (168)
T ss_dssp EEEEGGGCCTTCEEEEEET
T ss_pred EEEEHHHCCCCCEEEeccC
Confidence 6778899999999999874
No 310
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=21.72 E-value=2.4e+02 Score=26.71 Aligned_cols=28 Identities=11% Similarity=0.087 Sum_probs=23.9
Q ss_pred EEEEeCchhHHHHHHHhCCcE-----EEEcCcc
Q 018935 53 VWIWTESKQVMTAAVERGWNT-----FVFLSEN 80 (348)
Q Consensus 53 vWiw~~~K~~vT~ALEsG~~~-----~v~~~~~ 80 (348)
-|.+..+.+.+..|..+|+|. ++++-||
T Consensus 24 ~~~~~~~~~~~eka~~~gaD~~pv~~vilDLED 56 (339)
T 3r4i_A 24 CDHYAGSEKLMLKSLALQQQLGPVFDITLDCED 56 (339)
T ss_dssp EEEEECSHHHHHHHHHHHHHHCTTEEEEEESST
T ss_pred HHhhCCCHHHHHHHHhCCCCcCCCCcEEEECCC
Confidence 566668899999999999998 9988765
No 311
>2cx0_A Hypothetical protein APE0525; PUA domain, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix} SCOP: b.122.1.1 d.17.6.4 PDB: 2cx1_A* 1zs7_A
Probab=21.70 E-value=1e+02 Score=26.89 Aligned_cols=53 Identities=19% Similarity=0.226 Sum_probs=40.3
Q ss_pred CeeeecCCceeE----EEecCCceeeeeeccCCCeEEEEcC-CCCeeEEeeeeEEeeccc
Q 018935 272 PFRVNAGPVHAY----VLVPGGKTCYLSELKSGKEVIVVDQ-KGRQRTAVVGRVKIESRP 326 (348)
Q Consensus 272 PFRVNAGaVHaY----v~~pggkT~YLSEL~aG~eVLvVd~-~G~tR~~~VGRvKIE~RP 326 (348)
-..|+.||+.+- =++|-|=+..=.+++.||.|.|++. +| +..-+|++..-..-
T Consensus 94 ~v~vd~gA~~al~~GasLl~~GV~~~~g~f~~Gd~V~I~~~~~g--~~iA~G~~~~ss~e 151 (187)
T 2cx0_A 94 VVLVDKGAAIALAKGAHLMIPGVVGVEGSFTRGDVVAALYHETR--TPVMVGVAEVDSSA 151 (187)
T ss_dssp EEEECHHHHHHHHHTCCEEGGGEEEEEECCCTTCEEEEEETTTT--EEEEEEEESSCHHH
T ss_pred EEEECccHHHHHhCCCCcCCCccEeCCCCcCCCCEEEEEECCCC--eEEEEEEEecCHHH
Confidence 567899987643 2556678888789999999999997 56 56888988764443
No 312
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=21.48 E-value=5e+02 Score=24.22 Aligned_cols=66 Identities=21% Similarity=0.194 Sum_probs=38.8
Q ss_pred CCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcC---CHHHHHHHH-HHhhcccCeEEEe-----cCCHHH-HHHHHH
Q 018935 132 QAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISK---TPSEAQIFL-EALEQGLGGIVLK-----VEDVKA-VLALKE 201 (348)
Q Consensus 132 ~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~---~~~eA~~al-~~LE~G~DGVvl~-----~~d~~~-v~~l~~ 201 (348)
.+|+|-..... =-++.+++.. +..|++.=. +.+|+-... ++++.|++|+++- .+||.+ +++|.+
T Consensus 202 GAD~VKt~~t~---e~~~~vv~~~---~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~~ 275 (295)
T 3glc_A 202 GAQIIKTYYVE---KGFERIVAGC---PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQA 275 (295)
T ss_dssp TCSEEEEECCT---TTHHHHHHTC---SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred CCCEEEeCCCH---HHHHHHHHhC---CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHHH
Confidence 67888876431 1256666542 344555432 445554443 7889999999874 457744 455555
Q ss_pred hh
Q 018935 202 YF 203 (348)
Q Consensus 202 ~~ 203 (348)
++
T Consensus 276 iv 277 (295)
T 3glc_A 276 VV 277 (295)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 313
>3nk6_A 23S rRNA methyltransferase; nosiheptide, nosiheptide-resistance methyltransferase, 23S R methyltransferase; 2.00A {Streptomyces actuosus} PDB: 3nk7_A* 3gyq_A*
Probab=21.30 E-value=2.5e+02 Score=25.79 Aligned_cols=118 Identities=14% Similarity=0.058 Sum_probs=60.9
Q ss_pred CcEEEEEeCchhHHHHHHHhCCc--EEEEcCcchhhhhhccceeeeeeeeecCCccccCCCCeeEEEEEecChhhhhhhc
Q 018935 50 PKRVWIWTESKQVMTAAVERGWN--TFVFLSENQQLAIDWSTIALLDPLFIKEGEVYDSGDRRVGSIIEVSTPQELQQLQ 127 (348)
Q Consensus 50 ~K~vWiw~~~K~~vT~ALEsG~~--~~v~~~~~~e~~~~l~~i~~i~~l~~~~g~~~~~~gk~v~~~~~v~~~ed~e~~~ 127 (348)
...+|++ -+..|..||++|.. .+++.++..+. .++-. .....+.+ +..-+++.++.++
T Consensus 32 ~g~flve--G~~~V~eaL~~~~~i~~l~~~~~~~~~-~~l~~-------------~~~~~~~~----v~~v~~~~l~~ls 91 (277)
T 3nk6_A 32 IKTTLIE--DTEPLMECIRAGVQFIEVYGSSGTPLD-PALLD-------------LCRQREIP----VRLIDVSIVNQLF 91 (277)
T ss_dssp -CEEEEE--SHHHHHHHHHTTCCEEEEEEETTSCCC-HHHHH-------------HHHHTTCC----EEEECHHHHTTCC
T ss_pred cCCEEEE--eHHHHHHHHhCCCCeEEEEEeCCccCc-HHHHH-------------HHHhcCCc----EEEECHHHHHHhh
Confidence 3345554 49999999999953 56665432111 00000 00111221 2335777777776
Q ss_pred cccCCCCeEEEeCCCCeeeehhhhhhcccCCCceEEEEcCCHHHHHHHHHH-hhcccCeEEEec
Q 018935 128 PADGQAENIVIDLPDWQVIPAENIVASFQGSGKTVFAISKTPSEAQIFLEA-LEQGLGGIVLKV 190 (348)
Q Consensus 128 ~~~~~~~~vvv~~~DW~iIPlENliA~~q~~~~~l~a~v~~~~eA~~al~~-LE~G~DGVvl~~ 190 (348)
..... .-++..+.-....+++.+++. .. ..=++-.+.|+.-.-..+-+ ---|+|||++.+
T Consensus 92 ~~~~~-qGv~a~~~~~~~~~l~~~~~~-~~-~~lvLd~v~dP~NlGaI~Rta~a~G~~~vil~~ 152 (277)
T 3nk6_A 92 KAERK-AKVFGIARVPRPARLADIAER-GG-DVVVLDGVKIVGNIGAIVRTSLALGAAGIVLVD 152 (277)
T ss_dssp ------CCEEEEEECCCCCCHHHHHHH-CS-CEEEEESCCCHHHHHHHHHHHHHTTCSEEEEES
T ss_pred CCCCC-CeEEEEEecCCCCCHHHHhcc-CC-CEEEEEcCCCcchHHHHHHHHHHcCCCEEEEcC
Confidence 64332 333333433333478888764 22 23455566677665554443 346999999988
No 314
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=21.06 E-value=30 Score=26.32 Aligned_cols=37 Identities=22% Similarity=0.190 Sum_probs=24.4
Q ss_pred ceEEEEcC-CHHHHHHHHHHhhcccCeEEEecCCHHHH
Q 018935 160 KTVFAISK-TPSEAQIFLEALEQGLGGIVLKVEDVKAV 196 (348)
Q Consensus 160 ~~l~a~v~-~~~eA~~al~~LE~G~DGVvl~~~d~~~v 196 (348)
..++.... ...+...+..+++.|+++.+.+|-++.++
T Consensus 88 ~~iiil~~~~~~~~~~~~~~~~~ga~~~l~KP~~~~~l 125 (145)
T 3kyj_B 88 AKICMLSSVAVSGSPHAARARELGADGVVAKPSGTVSH 125 (145)
T ss_dssp CEEC-CBSSCSTTSSHHHHHHHTTCSCCCBCCCSCC--
T ss_pred CCeEEEEEeccCChHHHHHHHhCCCCEEEeCCCCHHHH
Confidence 45555544 23344556788999999999999986654
No 315
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=20.86 E-value=25 Score=33.78 Aligned_cols=48 Identities=21% Similarity=0.414 Sum_probs=39.0
Q ss_pred eeeecCCceeEE-----EecCCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEe
Q 018935 273 FRVNAGPVHAYV-----LVPGGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKI 322 (348)
Q Consensus 273 FRVNAGaVHaYv-----~~pggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKI 322 (348)
-.|++||+.+-. ++|-|=+..=-+.+.||-|.++|.+|+ ..-+|++..
T Consensus 278 v~vD~gA~~al~~~g~sLl~~Gi~~v~g~F~~gd~V~i~~~~g~--~ia~G~~~y 330 (367)
T 2j5v_A 278 ITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGR--DIAHGVSRY 330 (367)
T ss_dssp EEECHHHHHHHHHHCCCBCGGGEEEEESCCCTTCEEEEEETTCC--EEEEEECSS
T ss_pred EEECcCHHHHHHhCCCccCCcccEEEECcccCCCEEEEECCCCC--EEEEEEecC
Confidence 568899887765 678999999999999999999999985 455666543
No 316
>1vi4_A Regulator of ribonuclease acivity A protein 1; structural genomics, unknown function; 1.87A {Vibrio cholerae} SCOP: c.8.7.1
Probab=20.78 E-value=30 Score=30.38 Aligned_cols=27 Identities=37% Similarity=0.513 Sum_probs=23.3
Q ss_pred eeeeeccCCCeEEEEcCCCCeeEEeeee
Q 018935 292 CYLSELKSGKEVIVVDQKGRQRTAVVGR 319 (348)
Q Consensus 292 ~YLSEL~aG~eVLvVd~~G~tR~~~VGR 319 (348)
.+|.+...| .||++|..|..+.+++|-
T Consensus 53 ~al~~~~~G-~VlVvd~~g~~~~A~~G~ 79 (174)
T 1vi4_A 53 DVLSQNGKG-KVLVVDGHGSCHKALMGD 79 (174)
T ss_dssp HHHTSCCTT-EEEEEECTTCCSSEEECH
T ss_pred HHHhccCCC-EEEEEECCCCCCceehHH
Confidence 588888888 799999999999998884
No 317
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=20.73 E-value=2.6e+02 Score=28.64 Aligned_cols=153 Identities=13% Similarity=0.125 Sum_probs=0.0
Q ss_pred CCcEEEEEe-CchhHHHHHHHhCCcEEEEcCcchhhhhhccc--eeeeeeeee--cCCccccCCCC-------eeEEEEE
Q 018935 49 KPKRVWIWT-ESKQVMTAAVERGWNTFVFLSENQQLAIDWST--IALLDPLFI--KEGEVYDSGDR-------RVGSIIE 116 (348)
Q Consensus 49 ~~K~vWiw~-~~K~~vT~ALEsG~~~~v~~~~~~e~~~~l~~--i~~i~~l~~--~~g~~~~~~gk-------~v~~~~~ 116 (348)
+...++|.. -+.+.+..|++||+|+++++-||. .+..|.. -++....-. .+......+|| ....++.
T Consensus 84 ~~RR~~l~~P~~~km~~kAl~sgAd~vi~DlEDS-Vap~wk~~~~ar~~l~~al~~~~~~~~~~G~~~~l~~~~~~l~VR 162 (528)
T 3cux_A 84 EDRRVEITGPVDRKMVINALNSGAHLFMADFEDS-NSPTWENAIEGQINLRDAVKGTISHKNENGKEYRLNSKTAVLIVR 162 (528)
T ss_dssp SCCSEEEEEESCHHHHHHHHTSSCSEEEEESSTT-SCCCHHHHHHHHHHHHHHHHTCCCEECTTSCEECCCSSCCEEEEE
T ss_pred hcCeeEEECCCCHHHHHHHHhcCCCEEEeccccC-CCccccchHHHHHHHHHHHhccccccCCCCceeecCCCCcEEEEE
Q ss_pred ecChhhhhhhccccCCCCeEEEeCCCCeeee-------------hhhhhhcccCCCceEEEEcCCHHHHHHHHHHh----
Q 018935 117 VSTPQELQQLQPADGQAENIVIDLPDWQVIP-------------AENIVASFQGSGKTVFAISKTPSEAQIFLEAL---- 179 (348)
Q Consensus 117 v~~~ed~e~~~~~~~~~~~vvv~~~DW~iIP-------------lENliA~~q~~~~~l~a~v~~~~eA~~al~~L---- 179 (348)
+.+-.- ..+.+.+++. -|| +..+++.-.+- .=++-.+.+++|++..-.++
T Consensus 163 ~ng~~~---------~e~~v~~dg~---~v~~~l~D~~l~~~hdl~~l~~~~~gp-yi~LPK~es~~Ev~~~~~lf~~~E 229 (528)
T 3cux_A 163 PRGWHL---------EEKHMQVDGK---NMSGSLVDFGLYFFHNAKALLEKGSGP-YFYLPKMESYLEARLWNDVFVFAQ 229 (528)
T ss_dssp CCCTTC---------EEEEEEETTE---EEEHHHHHHHHHHHHHHHHHHHTTCCC-EEEECCCCSHHHHHHHHHHHHHHH
T ss_pred eCCCCC---------CcchhccCCc---ccchHHHHHHHHHHHHHHHHHhcCCCC-EEEccCCCCHHHHHHHHHHHHHHH
Q ss_pred -----hcccCeEEEecCCHHHHHHHHHhhcccccccceeee
Q 018935 180 -----EQGLGGIVLKVEDVKAVLALKEYFDGRNEVSNLLSL 215 (348)
Q Consensus 180 -----E~G~DGVvl~~~d~~~v~~l~~~~~~~~~~~~~l~L 215 (348)
++|.=.+..--+.+..+..+.+++...+.-...+.+
T Consensus 230 ~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~ 270 (528)
T 3cux_A 230 KYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNC 270 (528)
T ss_dssp HHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEE
T ss_pred HHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEec
No 318
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=20.72 E-value=27 Score=31.33 Aligned_cols=29 Identities=10% Similarity=-0.149 Sum_probs=20.4
Q ss_pred EcCCHHHHHHHHHHhhcccCeEEEecCCHHHH
Q 018935 165 ISKTPSEAQIFLEALEQGLGGIVLKVEDVKAV 196 (348)
Q Consensus 165 ~v~~~~eA~~al~~LE~G~DGVvl~~~d~~~v 196 (348)
.+-+.++++.++ +.|+|||++...|+.-+
T Consensus 84 tvl~~d~~~~A~---~aGAd~v~~p~~d~~v~ 112 (225)
T 1mxs_A 84 TVLDRSMFAAVE---AAGAQFVVTPGITEDIL 112 (225)
T ss_dssp CCCSHHHHHHHH---HHTCSSEECSSCCHHHH
T ss_pred eEeeHHHHHHHH---HCCCCEEEeCCCCHHHH
Confidence 345667777654 56999999887776543
No 319
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=20.62 E-value=1.4e+02 Score=25.29 Aligned_cols=62 Identities=13% Similarity=0.162 Sum_probs=38.4
Q ss_pred cChhhhhhhccccCCCCeEEEeCCCCeeeehhhhhh----cccCCCceEEEEcCCHHHHHHHHHHhhcccCeEEE
Q 018935 118 STPQELQQLQPADGQAENIVIDLPDWQVIPAENIVA----SFQGSGKTVFAISKTPSEAQIFLEALEQGLGGIVL 188 (348)
Q Consensus 118 ~~~ed~e~~~~~~~~~~~vvv~~~DW~iIPlENliA----~~q~~~~~l~a~v~~~~eA~~al~~LE~G~DGVvl 188 (348)
++++.++.+. ...++.+|+...|- -.|+.+ .-.+.+.++++.+.+.+.++.+. +.|+|-|+.
T Consensus 59 ~~~~~l~~a~--i~~ad~vi~~~~~d----~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~---~~G~~~vi~ 124 (234)
T 2aef_A 59 TRVSDLEKAN--VRGARAVIVDLESD----SETIHCILGIRKIDESVRIIAEAERYENIEQLR---MAGADQVIS 124 (234)
T ss_dssp TCHHHHHHTT--CTTCSEEEECCSCH----HHHHHHHHHHHHHCSSSEEEEECSSGGGHHHHH---HHTCSEEEC
T ss_pred CCHHHHHhcC--cchhcEEEEcCCCc----HHHHHHHHHHHHHCCCCeEEEEECCHhHHHHHH---HCCCCEEEC
Confidence 4555544432 34678888855542 334432 22233458999999999987654 579997654
No 320
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=20.33 E-value=57 Score=28.47 Aligned_cols=35 Identities=6% Similarity=0.100 Sum_probs=25.0
Q ss_pred cCCHHHHHHHHHHhhcccCeEEEecC---CHHHHHHHHHhh
Q 018935 166 SKTPSEAQIFLEALEQGLGGIVLKVE---DVKAVLALKEYF 203 (348)
Q Consensus 166 v~~~~eA~~al~~LE~G~DGVvl~~~---d~~~v~~l~~~~ 203 (348)
++++++++.++ +.|+|+|++-+. ||+.+.++.+.+
T Consensus 88 i~~~~~~~~~l---~~Gad~V~ig~~~l~dp~~~~~~~~~~ 125 (247)
T 3tdn_A 88 AGKMEHFLEAF---LRGADKVSINTAAVENPSLITQIAQTF 125 (247)
T ss_dssp CCSHHHHHHHH---HTTCSEECCSHHHHHCTHHHHHHHHHH
T ss_pred CCCHHHHHHHH---HcCCCeeehhhHHhhChHHHHHHHHHh
Confidence 67888877764 679999999884 566565555443
No 321
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=20.22 E-value=1e+02 Score=28.27 Aligned_cols=32 Identities=13% Similarity=0.044 Sum_probs=25.2
Q ss_pred CCCcEEEEEeC-c----------hhHHHHHHHhCCcEEEEcCc
Q 018935 48 SKPKRVWIWTE-S----------KQVMTAAVERGWNTFVFLSE 79 (348)
Q Consensus 48 ~~~K~vWiw~~-~----------K~~vT~ALEsG~~~~v~~~~ 79 (348)
.+-+.||+|+- + .+.+...++.|+|+|+.+..
T Consensus 226 ~~G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiTD~P 268 (292)
T 3mz2_A 226 ERGVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIESDRP 268 (292)
T ss_dssp HTTBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEESCH
T ss_pred HCCCEEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEeCCH
Confidence 45678999982 2 35888999999999998764
No 322
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=20.20 E-value=30 Score=31.05 Aligned_cols=105 Identities=12% Similarity=0.116 Sum_probs=58.5
Q ss_pred eeEEEEEEEEEcCC----cceEEEeec--C--CCCCCceEEEeccCceEEEEeecccc---CCCCCCCCeeeec------
Q 018935 215 LMKATVTRVDVAGM----GDRVCVDLC--S--LMRPGEGLLVGSFARGLFLVHSECLE---SNYIASRPFRVNA------ 277 (348)
Q Consensus 215 L~~atVt~V~~vGm----GdRVCVDtc--s--ll~~GEGmLVGS~S~glFLVhsEt~e---s~Yva~RPFRVNA------ 277 (348)
...++|++++.+.- .|-..+-.. . -+.||+ +++|-...... ......|||-+--
T Consensus 28 ~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ---------~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~ 98 (311)
T 3lo8_A 28 PFTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQ---------SYGVIPPGENPKKPGAPQNVRLYSIASTRYGDN 98 (311)
T ss_dssp CEEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTC---------EEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTT
T ss_pred CeEEEEEeeEeccCCCCCCccEEEEEeCCCCCcccCCC---------EEEEeCCCCccccCCCCCCceeeEecCCCcccC
Confidence 46899999999873 444333322 1 234444 23332211100 0112467776643
Q ss_pred ---CCceeEEEe--------------c-CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEEeeccceeEEE
Q 018935 278 ---GPVHAYVLV--------------P-GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVKIESRPLILVE 331 (348)
Q Consensus 278 ---GaVHaYv~~--------------p-ggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvKIE~RPLlLIe 331 (348)
|-++=+|.. | |.-|+||.+|+.||+|.+-...|..-... . .-..+|++||=
T Consensus 99 ~~~~~~~l~Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~v~gP~G~~~~~~--~-~~~~~~~vlIa 167 (311)
T 3lo8_A 99 FDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQLTGPSGKIMLLP--E-EDPNATHIMIA 167 (311)
T ss_dssp TSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCTTCEEEEEEEECCTTCCC--C-SCTTCEEEEEE
T ss_pred CCCCEEEEEEEEEEecccccCcCCcCCCCchhhHHhcCCCcCEEEEEeccCCcccCC--C-cCCCCCEEEEE
Confidence 345556653 3 44689999999999999987777542110 0 01357888874
No 323
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=20.18 E-value=78 Score=29.51 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=0.0
Q ss_pred ChhhhhhhccccC-C--CCeEEEeCCCCeeeehhhhhhcccCC--CceEEEE-cCCHHHHHHHHHHhhcccCeEEE
Q 018935 119 TPQELQQLQPADG-Q--AENIVIDLPDWQVIPAENIVASFQGS--GKTVFAI-SKTPSEAQIFLEALEQGLGGIVL 188 (348)
Q Consensus 119 ~~ed~e~~~~~~~-~--~~~vvv~~~DW~iIPlENliA~~q~~--~~~l~a~-v~~~~eA~~al~~LE~G~DGVvl 188 (348)
.+++++.+..... . .+++.++...=.--+..++|+++... ..-++.. +.+.++|+.+. +.|+|+|++
T Consensus 104 ~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~---~aGad~Ivv 176 (336)
T 1ypf_A 104 KEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELE---NAGADATKV 176 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHH---HHTCSEEEE
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHH---HcCCCEEEE
No 324
>2egj_A Hypothetical protein AQ_1494; structural genomics; 1.80A {Aquifex aeolicus} PDB: 2egi_A 2egr_A
Probab=20.10 E-value=1.8e+02 Score=21.34 Aligned_cols=29 Identities=14% Similarity=0.027 Sum_probs=20.7
Q ss_pred CCceeeeeeccCCCeEEEEcCCCCeeEEeeeeEE
Q 018935 288 GGKTCYLSELKSGKEVIVVDQKGRQRTAVVGRVK 321 (348)
Q Consensus 288 ggkT~YLSEL~aG~eVLvVd~~G~tR~~~VGRvK 321 (348)
.-..+|+.+++.||.|.+ +++..-+|+..
T Consensus 58 ~~~i~y~~~~~~gd~v~v-----~~~v~~~~~~~ 86 (128)
T 2egj_A 58 NAYCEYKKPLFYDDVFEV-----HLNLEELSRFT 86 (128)
T ss_dssp EEEEEECSCCCTTCEEEE-----EEEEEEECSSE
T ss_pred EEEEEEcCCCcCCCEEEE-----EEEEEEeCCcE
Confidence 457789999999999888 34445555433
No 325
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=20.07 E-value=1e+02 Score=31.78 Aligned_cols=38 Identities=24% Similarity=0.353 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHhhcccCeEEEe-cCCHHHHHHHHHhhcc
Q 018935 168 TPSEAQIFLEALEQGLGGIVLK-VEDVKAVLALKEYFDG 205 (348)
Q Consensus 168 ~~~eA~~al~~LE~G~DGVvl~-~~d~~~v~~l~~~~~~ 205 (348)
+..|......+|+.|+|+|.++ .+++++++++++++++
T Consensus 172 tekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~ 210 (587)
T 2e28_A 172 TEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEA 210 (587)
T ss_dssp CHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 3467777788999999999998 5789999999998853
Done!