BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018937
(348 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JJP9|UBQL1_RAT Ubiquilin-1 OS=Rattus norvegicus GN=Ubqln1 PE=1 SV=1
Length = 582
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 175/311 (56%), Gaps = 50/311 (16%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P+ +RQTLE ARNP
Sbjct: 177 MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPNIMRQTLELARNP 236
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN +R +SN+ES P G+N LRRMY +QEP LNA NPFA+L+
Sbjct: 237 AMMQEMMRNQERDLSNLESIPGGYNALRRMYTDIQEPMLNAAQE-----QFGGNPFASLV 291
Query: 121 GTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPWM--------AAGTGGAQTNTTR 172
S +++E T S N +PLPNPW A+G+ G+ TNT
Sbjct: 292 S--------------SPSSAEGTQPSRTENRDPLPNPWAPQTPQSSPASGSTGSTTNTV- 336
Query: 173 SSSLGDARPQTPAGI----------AGLS---SPGFEDIFGAMQDTNSLNQ-MLQNPAVT 218
S+S G+A TPAG AG S +PG + + + + L Q ML P +
Sbjct: 337 STSAGNAT-STPAGQGTSGPNLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMR 395
Query: 219 QMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMI-------QNPEFLRQLTNPETMQ 271
MMQSL NP Q++ NP Q+R+ + QNP+ L ++NP MQ
Sbjct: 396 SMMQSLSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQ 455
Query: 272 QMVTLQQFLLT 282
++ +QQ L T
Sbjct: 456 ALLQIQQGLQT 466
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Query: 126 NQAREGSNNPSTTTSESTTGSPAPNTNPLPNPWMAAGTGGAQTNTTRSSSLGDARPQTPA 185
N+ ++ S + TT S T SPAP++NP T G N++ +
Sbjct: 101 NRPQDNSAQQTNTTGNSVTSSPAPDSNP---------TSGPAANSSFGLGGLGGLAGLSS 151
Query: 186 GIAGLSSPGFEDIFGAMQDTNSLNQMLQNPA-VTQMM-----QSLLSNPQYMNQILGLNP 239
++ F ++ MQ Q+L NP + Q+M QS+LSNP M Q++ NP
Sbjct: 152 LGLNTTN--FSELQSQMQ-----RQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANP 204
Query: 240 QLRSMVDSNSQLREMIQNPEFLRQ----LTNPETMQQMVTLQQFLLTQL 284
Q++ ++ N ++ M+ NP +RQ NP MQ+M+ Q+ L+ L
Sbjct: 205 QMQQLIQRNPEISHMLNNPNIMRQTLELARNPAMMQEMMRNQERDLSNL 253
>sp|Q5R684|UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii GN=UBQLN1 PE=2 SV=1
Length = 589
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 179/330 (54%), Gaps = 49/330 (14%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 186 MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP L+A NPFA+L+
Sbjct: 246 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGG-----NPFASLV 300
Query: 121 GTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPWMAAGTGGAQTNTTRSSSLGDAR 180
+T++ E + S N +PLPNPW + + ++ +S++G
Sbjct: 301 S--------------NTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTT 346
Query: 181 PQTPAGIAGLS----------------SPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQS 223
T +G +G S +PG + + + + L Q ML P + MMQS
Sbjct: 347 GSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQS 406
Query: 224 LLSNPQYMNQILGLNPQLRSMVDSNSQLREMI-------QNPEFLRQLTNPETMQQMVTL 276
L NP Q++ NP Q+R+ + QNP+ L ++NP MQ ++ +
Sbjct: 407 LSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQI 466
Query: 277 QQFLLTQLGRAQSTQQPGQTGGGT-GIGFI 305
QQ L T +T+ PG G T G+G +
Sbjct: 467 QQGLQT-----LATEAPGLIPGFTPGLGAL 491
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 31/139 (22%)
Query: 156 NPWMA------AGTGGAQTNTTRSSSLGDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLN 209
NP+ AG NTT S L Q+ LS+P +
Sbjct: 145 NPFGLGGLGGLAGLSSLGLNTTNFSEL-----QSQMQRQLLSNPEM------------MV 187
Query: 210 QMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQ----LT 265
Q+++NP V QS+LSNP M Q++ NPQ++ ++ N ++ M+ NP+ +RQ
Sbjct: 188 QIMENPFV----QSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELAR 243
Query: 266 NPETMQQMVTLQQFLLTQL 284
NP MQ+M+ Q L+ L
Sbjct: 244 NPAMMQEMMRNQDRALSNL 262
>sp|Q9UMX0|UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens GN=UBQLN1 PE=1 SV=2
Length = 589
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 179/330 (54%), Gaps = 49/330 (14%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 186 MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 245
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP L+A NPFA+L+
Sbjct: 246 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGG-----NPFASLV 300
Query: 121 GTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPWMAAGTGGAQTNTTRSSSLGDAR 180
+T++ E + S N +PLPNPW + + ++ +S++G
Sbjct: 301 S--------------NTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTT 346
Query: 181 PQTPAGIAGLS----------------SPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQS 223
T +G +G S +PG + + + + L Q ML P + MMQS
Sbjct: 347 GSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQS 406
Query: 224 LLSNPQYMNQILGLNPQLRSMVDSNSQLREMI-------QNPEFLRQLTNPETMQQMVTL 276
L NP Q++ NP Q+R+ + QNP+ L ++NP MQ ++ +
Sbjct: 407 LSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQI 466
Query: 277 QQFLLTQLGRAQSTQQPGQTGGGT-GIGFI 305
QQ L T +T+ PG G T G+G +
Sbjct: 467 QQGLQT-----LATEAPGLIPGFTPGLGAL 491
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 31/139 (22%)
Query: 156 NPWMA------AGTGGAQTNTTRSSSLGDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLN 209
NP+ AG NTT S L Q+ LS+P +
Sbjct: 145 NPFGLGGLGGLAGLSSLGLNTTNFSEL-----QSQMQRQLLSNPEM------------MV 187
Query: 210 QMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQ----LT 265
Q+++NP V QS+LSNP M Q++ NPQ++ ++ N ++ M+ NP+ +RQ
Sbjct: 188 QIMENPFV----QSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELAR 243
Query: 266 NPETMQQMVTLQQFLLTQL 284
NP MQ+M+ Q L+ L
Sbjct: 244 NPAMMQEMMRNQDRALSNL 262
>sp|Q8R317|UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus GN=Ubqln1 PE=1 SV=1
Length = 582
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 166/309 (53%), Gaps = 46/309 (14%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 177 MVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNP 236
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP LNA NPFA+L+
Sbjct: 237 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLNAAQ-----EQFGGNPFASLV 291
Query: 121 GTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPW-------------------MAA 161
+ ++++E T S N +PLPNPW +
Sbjct: 292 SS--------------SSSAEGTQPSRTENRDPLPNPWAPQTSQSSPASGTTGSTTNTMS 337
Query: 162 GTGGAQTNTTRSSSLGDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQM 220
+GG T+T S AG + ++PG + + + + L Q ML P + M
Sbjct: 338 TSGGTATSTPAGQSTSGPSLVPGAGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSM 397
Query: 221 MQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMI-------QNPEFLRQLTNPETMQQM 273
+QSL NP Q++ NP Q+R+ + QNP+ L ++NP MQ +
Sbjct: 398 LQSLSQNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQAL 457
Query: 274 VTLQQFLLT 282
+ +QQ L T
Sbjct: 458 LQIQQGLQT 466
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 26/169 (15%)
Query: 126 NQAREGSNNPSTTTSESTTGSPAPNTNPLPNPWMAAGTGGAQTNTTRSSSLGDARPQTPA 185
N+ ++ S + + T SPAP++NP T G+ N++ +
Sbjct: 101 NRPQDNSAQQTNAPGSTVTSSPAPDSNP---------TSGSAANSSFGVGGLGGLAGLSS 151
Query: 186 GIAGLSSPGFEDIFGAMQDTNSLNQMLQNPA-VTQMM-----QSLLSNPQYMNQILGLNP 239
++ F ++ MQ Q+L NP + Q+M QS+LSNP M Q++ NP
Sbjct: 152 LGLNTTN--FSELQSQMQ-----RQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANP 204
Query: 240 QLRSMVDSNSQLREMIQNPEFLRQ----LTNPETMQQMVTLQQFLLTQL 284
Q++ ++ N ++ M+ NP+ +RQ NP MQ+M+ Q L+ L
Sbjct: 205 QMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNL 253
>sp|Q9NRR5|UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens GN=UBQLN4 PE=1 SV=2
Length = 601
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 47/306 (15%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +IM P+VQ++M+NP++MR++IM NPQM+++++RNPE++H+LN+P +RQT+E ARNP
Sbjct: 196 LSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 255
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEP-FLNATSMAGNAGNDNSNPFAAL 119
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP F A GN NPF++L
Sbjct: 256 AMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGN------NPFSSL 309
Query: 120 LGTQGGNQAREGSNNPSTTTSESTTGSP--APNTNPLPNPWMAAGTGGAQTNTTRSSSLG 177
G S+S++ P N PLPNPW + + + G
Sbjct: 310 AG-----------------NSDSSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGG 352
Query: 178 DARPQT------PAGI--AGLSSPGFE--DIFGAMQDTNSLNQMLQN----PAVTQMMQS 223
Q P GI A L S F ++ +Q + Q++QN P + MMQ+
Sbjct: 353 SGTSQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRSMMQT 412
Query: 224 LLSNPQYMNQIL------GLNPQLRSMVDSNSQL-REMIQNPEFLRQLTNPETMQQMVTL 276
L NP + Q++ NPQL+ + + + +QNPE L LTNP MQ ++ +
Sbjct: 413 LAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQI 472
Query: 277 QQFLLT 282
QQ L T
Sbjct: 473 QQGLQT 478
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 208 LNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQ---- 263
L+Q+++NP V MM SNP M ++ NPQ++ +++ N ++ M+ NPE +RQ
Sbjct: 196 LSQIMENPLVQDMM----SNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMEL 251
Query: 264 LTNPETMQQMVTLQQFLLTQL 284
NP MQ+M+ Q L+ L
Sbjct: 252 ARNPAMMQEMMRNQDRALSNL 272
>sp|Q99NB8|UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus GN=Ubqln4 PE=1 SV=1
Length = 596
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 170/306 (55%), Gaps = 47/306 (15%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +IM P+VQ++M+NP++MR++IM NPQM+++++RNPE++H+LN+P +RQT+E ARNP
Sbjct: 191 LSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNP 250
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEP-FLNATSMAGNAGNDNSNPFAAL 119
+M+EMMRN DRA+SN+ES P G+N LRRMY +QEP F A GN NPF++L
Sbjct: 251 AMMQEMMRNQDRALSNLESVPGGYNALRRMYTDIQEPMFTAAREQFGN------NPFSSL 304
Query: 120 LGTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPW---------------MAAGTG 164
G + S+ P T N PLPNPW G+G
Sbjct: 305 AGN-----SDNSSSQPLRTE----------NREPLPNPWSPSPPTSQAPGSGGEGTGGSG 349
Query: 165 GAQTNTTRSSSLGDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQ-MLQNPAVTQMMQS 223
+Q + T S+ G +G+ +SP + + + + L Q ++ P + MMQ+
Sbjct: 350 TSQVHPTVSNPFGINAASLGSGM--FNSPEMQALLQQISENPQLMQNVISAPYMRTMMQT 407
Query: 224 LLSNPQYMNQIL------GLNPQLRSMVDSNSQL-REMIQNPEFLRQLTNPETMQQMVTL 276
L NP + Q++ NPQL+ + + + +QNPE L LTNP MQ ++ +
Sbjct: 408 LAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQI 467
Query: 277 QQFLLT 282
QQ L T
Sbjct: 468 QQGLQT 473
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 208 LNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQ---- 263
L+Q+++NP V MM SNP M ++ NPQ++ +++ N ++ M+ NPE +RQ
Sbjct: 191 LSQIMENPLVQDMM----SNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMEL 246
Query: 264 LTNPETMQQMVTLQQFLLTQL 284
NP MQ+M+ Q L+ L
Sbjct: 247 ARNPAMMQEMMRNQDRALSNL 267
>sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=1 SV=1
Length = 523
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 100/159 (62%), Gaps = 26/159 (16%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
++E+ N ++ +L++NP+I R+++M NP+MRE+++ NPE+A +L+DP LRQ+LE RNP
Sbjct: 113 IQEMFNSRMMDSLLDNPDIFRDMMMGNPEMREVLNNNPEMAQMLSDPRQLRQSLEMMRNP 172
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGND-NSNPFAAL 119
ELMREMMRN DRAM NIE+ PEGFN+LRRMY +QEP +NA + + N NSNP
Sbjct: 173 ELMREMMRNADRAMINIENHPEGFNLLRRMYTDIQEPLMNAANQQAASQNQTNSNPI--- 229
Query: 120 LGTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPW 158
T PN+ PLPNPW
Sbjct: 230 ----------------------QTNTDANPNSQPLPNPW 246
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Query: 207 SLNQMLQNPAV-----TQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFL 261
++N M+ NP + ++MM SLL NP ++ NP++R ++++N ++ +M+ +P L
Sbjct: 103 NINDMMNNPMIQEMFNSRMMDSLLDNPDIFRDMMMGNPEMREVLNNNPEMAQMLSDPRQL 162
Query: 262 RQ----LTNPETMQQMV 274
RQ + NPE M++M+
Sbjct: 163 RQSLEMMRNPELMREMM 179
>sp|Q9QZM0|UBQL2_MOUSE Ubiquilin-2 OS=Mus musculus GN=Ubqln2 PE=1 SV=2
Length = 638
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 193 MIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 252
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAAL 119
+M+EMMRN D A+SN+ES P G+N LRRMY +QEP LNA NPFA +
Sbjct: 253 AMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNAAQ-----EQFGGNPFATV 306
>sp|Q9UHD9|UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens GN=UBQLN2 PE=1 SV=2
Length = 624
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 82/101 (81%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
M +IM P VQ++++NP++MR LIM NPQM+++I RNPE++H+LN+P +RQTLE ARNP
Sbjct: 182 MIQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNP 241
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNA 101
+M+EMMRN D A+SN+ES P G+N LRRMY +QEP LNA
Sbjct: 242 AMMQEMMRNQDLALSNLESIPGGYNALRRMYTDIQEPMLNA 282
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 120 LGTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLP-----NPWMAAGTGGAQTNTTRSS 174
L + N+ + S PS +TT + P +N P NP+ GG ++
Sbjct: 100 LVIKSQNRPQGQSTQPSNAAGTNTTSASTPRSNSTPISTNSNPFGLGSLGGLAGLSSLGL 159
Query: 175 SLGD-ARPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQ 233
S + + Q+ ++SP + Q+++NP V QS+LSNP M Q
Sbjct: 160 SSTNFSELQSQMQQQLMASPEM------------MIQIMENPFV----QSMLSNPDLMRQ 203
Query: 234 ILGLNPQLRSMVDSNSQLREMIQNPEFLRQ----LTNPETMQQMVTLQQFLLTQL 284
++ NPQ++ ++ N ++ ++ NP+ +RQ NP MQ+M+ Q L+ L
Sbjct: 204 LIMANPQMQQLIQRNPEISHLLNNPDIMRQTLEIARNPAMMQEMMRNQDLALSNL 258
>sp|Q8C5U9|UBQL3_MOUSE Ubiquilin-3 OS=Mus musculus GN=Ubqln3 PE=2 SV=1
Length = 658
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 94/160 (58%), Gaps = 19/160 (11%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ ++++ P +Q L++N ++R L+++NP M+ +I +NPE+ HILN+P +RQT+E RNP
Sbjct: 168 VAQLVDDPFIQGLLSNTGLVRQLVLDNPHMQHLIQQNPEIGHILNNPEIMRQTMEFLRNP 227
Query: 61 ELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALL 120
+M+EMMR+ DRA+SN+ES P G+N+LR MY + +P LNA NPF
Sbjct: 228 SMMQEMMRSQDRALSNLESIPGGYNVLRTMYTDIMDPMLNAVQEQFGG-----NPFVTAT 282
Query: 121 GTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPWMA 160
+ + PS T N +PLPNPW +
Sbjct: 283 TASTTTTSSQ----PSRTE----------NCDPLPNPWTS 308
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 189 GLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSN 248
GL+S F D G++ M Q+ +V +++ L+ +P ++ +L +R +V N
Sbjct: 144 GLTSGSFSDQPGSL--------MWQHISVPELVAQLVDDP-FIQGLLSNTGLVRQLVLDN 194
Query: 249 SQLREMIQ-NPEFLRQLTNPETMQQ 272
++ +IQ NPE L NPE M+Q
Sbjct: 195 PHMQHLIQQNPEIGHILNNPEIMRQ 219
>sp|Q9H347|UBQL3_HUMAN Ubiquilin-3 OS=Homo sapiens GN=UBQLN3 PE=1 SV=2
Length = 655
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 33/215 (15%)
Query: 3 EIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPEL 62
++++ P + L++N ++R L+++NP M+++I NPE+ HILN+P +RQTLE RNP +
Sbjct: 170 QLIDDPFIPGLLSNTGLVRQLVLDNPHMQQLIQHNPEIGHILNNPEIMRQTLEFLRNPAM 229
Query: 63 MREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGT 122
M+EM+R+ DR +SN+ES P G+N+L MY + +P LNA NPFA
Sbjct: 230 MQEMIRSQDRVLSNLESIPGGYNVLCTMYTDIMDPMLNAVQEQFGG-----NPFATATTD 284
Query: 123 QGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPWMA--AGTGGAQTNTTRSSSLGDAR 180
A ++ PS N +PLPNPW + G+G Q D R
Sbjct: 285 ----NATTTTSQPSRME----------NCDPLPNPWTSTHGGSGSRQGRQDGDQDAPDIR 330
Query: 181 PQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNP 215
+ F + G ++ + L Q+ +NP
Sbjct: 331 NR------------FPNFLGIIRLYDYLQQLHENP 353
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 189 GLSSPGFEDIFGAMQDTNSLNQMLQNPA-VTQMMQS-----LLSNPQYMNQILGLNPQLR 242
GL+ GF D Q ++ + Q + P VTQ++ LLSN + Q++ NP ++
Sbjct: 144 GLAYRGFPD-----QPSSLMRQHVSVPEFVTQLIDDPFIPGLLSNTGLVRQLVLDNPHMQ 198
Query: 243 SMVDSNSQLREMIQNPEFLRQ----LTNPETMQQMVTLQQFLLTQL 284
++ N ++ ++ NPE +RQ L NP MQ+M+ Q +L+ L
Sbjct: 199 QLIQHNPEIGHILNNPEIMRQTLEFLRNPAMMQEMIRSQDRVLSNL 244
>sp|Q10169|DSK2_SCHPO Deubiquitination-protection protein dph1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dph1 PE=4 SV=1
Length = 354
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 205 TNSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQL 264
T L ML NP V + + SNPQ ++ I+ +P LR ++ +R+M+Q+PEF R +
Sbjct: 141 TEELANMLSNPMVQSSINEMFSNPQMLDMIINSSPHLR---NAPPYVRQMMQSPEFRRAM 197
Query: 265 TNPETMQQMVTLQQFLLTQLGRA 287
T+P+TM+QM L Q Q+G A
Sbjct: 198 TDPDTMRQMAQLHQ----QMGAA 216
>sp|Q8IYU4|UBQLN_HUMAN Ubiquilin-like protein OS=Homo sapiens GN=UBQLNL PE=2 SV=3
Length = 475
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 3 EIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPS-TLRQTLEAARNPE 61
+++ P +Q L++N E M I + ++++ +NPE++ +L D S L QTLE ARN
Sbjct: 174 QMLENPSIQRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLA 233
Query: 62 LMREMM------RNTDRAMS-----NIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGN 110
+++E+M +N + ++ +E+ P G N L + Y + + LN SM G
Sbjct: 234 MIQEIMQIQQPSQNLEYPLNPQPYLGLETMPGGNNALGQNYADINDQMLN--SMQDPFG- 290
Query: 111 DNSNPFAALLGTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLPNPWMAAGTGGAQTNT 170
NPF ALL Q Q + P + + + P T + N +GG +NT
Sbjct: 291 --GNPFTALLAGQVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYN-----SSGGFSSNT 343
Query: 171 TRSSSLGDARPQTPAGIAGLSSPGFEDIFGAMQ 203
+ + +L + A A +S+ G I Q
Sbjct: 344 SANDTLNKVNHTSKANTAMISTKGQSHICATRQ 376
>sp|P48510|DSK2_YEAST Ubiquitin domain-containing protein DSK2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DSK2 PE=1
SV=2
Length = 373
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 206 NSLNQMLQNPAVTQMMQSLLSNPQYMNQILGLNPQLRSMVDSNSQLREMIQNPEFLRQLT 265
+ L +M++NP M +LSNPQ ++ ++ NPQL++M Q R+M+Q+P F + LT
Sbjct: 149 DELLRMMENPIFQSQMNEMLSNPQMLDFMIQSNPQLQAM---GPQARQMLQSPMFRQMLT 205
Query: 266 NPETMQQ 272
NP+ ++Q
Sbjct: 206 NPDMIRQ 212
>sp|Q5XIP4|UBQLN_RAT Ubiquilin-like protein OS=Rattus norvegicus GN=Ubqlnl PE=2 SV=1
Length = 612
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 14/134 (10%)
Query: 1 MREIMNMPVVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNP 60
+ +++ VQ L++N M L +P M+++I +NPE++H+L++ L QTLE AR+
Sbjct: 172 IEQMLETLCVQRLLSNMFFMHQLPPEHPDMQDLIQQNPEVSHLLDNSEILCQTLELARHL 231
Query: 61 ELMREMM------RNTDRAMS-----NIESSPEGFNMLRRMYETVQEPFLNATSMAGNAG 109
+++E+M +N + ++ +E+ P G +L + Y+ + LN +
Sbjct: 232 AIIQEIMQIQQPAQNPEHTLNPQPYLGLETIPNGNIVLGQGYDNFNDHMLNGVHVHDLLE 291
Query: 110 NDNSNPFAALLGTQ 123
+D+ F ALL Q
Sbjct: 292 DDS---FTALLAEQ 302
>sp|Q14DL0|UBQLN_MOUSE Ubiquilin-like protein OS=Mus musculus GN=Ubqlnl PE=1 SV=2
Length = 610
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 9 VVQNLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARN 59
VQ+L++N + + + P M E+I +NPE++H+L++ L QTLE R+
Sbjct: 180 CVQSLLSNMDFVHQMPPEQPYMEELIQQNPEVSHLLDNSEILCQTLELVRH 230
>sp|Q5AY89|DDI1_EMENI DNA damage-inducible protein 1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ddi1
PE=3 SV=2
Length = 418
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 16 NPEIMRNLIMNNPQMREII-DRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAM 74
+PE++R I+ +P++R+ + RNPELA + +DP R+ L + E RE + AM
Sbjct: 93 DPEMIRLHILGDPRVRDAVRQRNPELADVAHDPHRFREVLLTQQRLESQREAEKEARIAM 152
Query: 75 SNIE 78
N +
Sbjct: 153 LNAD 156
>sp|Q0CJ13|DDI1_ASPTN DNA damage-inducible protein 1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=ddi1 PE=3 SV=1
Length = 413
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 16 NPEIMRNLIMNNPQMREIIDR-NPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAM 74
+PE +R I+ +P++RE + R NPEL++ +DP R+ L A + E E + AM
Sbjct: 85 DPETIRLHILGDPRVREAVRRQNPELSNAADDPQRFREVLIAQQRREAQLEAEKEARIAM 144
Query: 75 SNIE 78
N +
Sbjct: 145 LNAD 148
>sp|A1DCU5|DDI1_NEOFI DNA damage-inducible protein 1 OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ddi1 PE=3
SV=1
Length = 405
Score = 38.1 bits (87), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 16 NPEIMRNLIMNNPQMREIIDR-NPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAM 74
+PE +R I+ +P++RE + R NPELA ND R L A + E E + AM
Sbjct: 85 DPETIRLHILGDPRVREAVRRQNPELADAANDAQRFRDVLMAQQRREAQMEAEKEARIAM 144
Query: 75 SNIE 78
N +
Sbjct: 145 LNAD 148
>sp|A1CDT9|DDI1_ASPCL DNA damage-inducible protein 1 OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=ddi1 PE=3 SV=1
Length = 404
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 16 NPEIMRNLIMNNPQMREIIDR-NPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAM 74
+PE +R I+ +P++RE + R NPELA +D R+ L A + E E + AM
Sbjct: 84 DPETIRLHILGDPRVREAVRRQNPELAQAADDAHRFREVLMAQQRREAQLEAEKEARIAM 143
Query: 75 SN 76
N
Sbjct: 144 LN 145
>sp|A9NFG5|EX7L_ACHLI Exodeoxyribonuclease 7 large subunit OS=Acholeplasma laidlawii
(strain PG-8A) GN=xseA PE=3 SV=1
Length = 446
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 165 GAQTNTTRSSSLGDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAV 217
G +T+TT S + D R TP A L++P D+ ++D L+Q N +
Sbjct: 236 GHETDTTLSDYVSDLRAPTPTAAAELATPNMADLIKEIKDKVQLSQYYMNERI 288
>sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ddi1 PE=3
SV=1
Length = 405
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 16 NPEIMRNLIMNNPQMREIIDR-NPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRAM 74
+PE +R I+ +P++RE + R NPELA D R L A + E E + AM
Sbjct: 85 DPETIRLHILGDPRVREAVRRQNPELADAATDAQRFRDVLMAQQRREAQMEAEKEARIAM 144
Query: 75 SNIE 78
N +
Sbjct: 145 LNAD 148
>sp|Q87RW0|PUR4_VIBPA Phosphoribosylformylglycinamidine synthase OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=purL PE=3 SV=1
Length = 1302
Score = 35.8 bits (81), Expect = 0.54, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 46 DPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMA 105
+P+ + + A N E R + N D + ++ F M++ +ET + L+A
Sbjct: 200 NPNDIELMMFAQANSEHCRHKIFNADWTIDGVDQEKSLFKMIKNTFETTPDHVLSAY--- 256
Query: 106 GNAGNDNSNPFAALLGTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLP---NPWMAAG 162
DN+ A + G++ G + + T E T+ P +PW A
Sbjct: 257 ----KDNA---AVMTGSKVGRFFPDPKSRQYTYHHEDAHILMKVETHNHPTAISPWPGAS 309
Query: 163 TG-GAQTNTTRSSSLGDARPQTPAGIAGLSS-----PGFE-----DIFGAMQDTNSLNQM 211
TG G + ++ +G +P+ AG+ G ++ PGFE D + N+L+ M
Sbjct: 310 TGSGGEIRDEGATGIG-GKPK--AGLVGFTTSNLRIPGFEQPWETDFGKPGRIVNALDIM 366
Query: 212 LQNP 215
L+ P
Sbjct: 367 LEGP 370
>sp|Q0U3Y6|DDI1_PHANO DNA damage-inducible protein 1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DDI1 PE=3 SV=2
Length = 442
Score = 35.8 bits (81), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 15 NNPEIMRNLIMNNPQMR-EIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTDRA 73
++PE +R ++ NPQ++ E+ R+PEL I+ND R+ + +N E R A
Sbjct: 100 SDPEAVRQQVLRNPQVQAELRQRDPELLAIMNDADRWREAFASRQNSAQNAERERQNQIA 159
Query: 74 M-----SNIESSPEGFNMLR--RMYETVQEPF 98
+ N+E+ + +++R R+ E +++ +
Sbjct: 160 LLNEDPFNVEAQRKIEDIIRQERVVENLEKAY 191
>sp|P43139|DPOL_ASFL6 DNA polymerase beta OS=African swine fever virus (isolate
Pig/Portugal/Lis 60/1960) GN=DPOL PE=3 SV=1
Length = 1244
Score = 34.7 bits (78), Expect = 1.2, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 105 AGNAGNDNSNPFAALLGTQGGNQAREGSNNPSTTTSESTTGSPA--PNTNPLPNP 157
A AGN NP G GN A + NP+ + + G+PA P NP NP
Sbjct: 1066 AALAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNP 1120
>sp|Q6LU24|PUR4_PHOPR Phosphoribosylformylglycinamidine synthase OS=Photobacterium
profundum GN=purL PE=3 SV=1
Length = 1322
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 31/186 (16%)
Query: 46 DPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMA 105
+P+ + + A N E R + N D + +E F M++ YE E L+A
Sbjct: 200 NPNDIELMMFAQANSEHCRHKIFNADWTIDGVEQEKSLFKMIKNTYEKNHEHVLSAY--- 256
Query: 106 GNAGNDNSNPFAALLGTQGGN-----QAREGSNNPSTTTSESTTGSPAPNTNPLPNPWMA 160
DN+ A + G++ G ++R+ N + N +PW
Sbjct: 257 ----KDNA---AVMEGSEVGRFFPNPESRQ--YNYHQEAAHILMKVETHNHPTAISPWPG 307
Query: 161 AGTG-GAQTNTTRSSSLGDARPQTPAGIAG-----LSSPGFE-----DIFGAMQDTNSLN 209
A TG G + ++ LG +P+ AG+ G L PGFE D + N+L
Sbjct: 308 ASTGSGGEIRDEGATGLG-GKPK--AGLVGFTVSNLRVPGFEQPWETDFGKPGRIVNALE 364
Query: 210 QMLQNP 215
ML+ P
Sbjct: 365 IMLEGP 370
>sp|B1I069|RF1_LYSSC Peptide chain release factor 1 OS=Lysinibacillus sphaericus (strain
C3-41) GN=prfA PE=3 SV=1
Length = 358
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 12 NLMNNPEIMRNLIMNNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMRNTD 71
+++N+ + +R ++E +D E ++ R+ L++ ++P+ M EM++
Sbjct: 23 DIVNDSKKLREYSKEQSDIQETVDTYREYKNVKEQLVDTREMLDSEKDPD-MHEMVK--- 78
Query: 72 RAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAGNAGNDNSNPFAALLGTQGGNQA 128
E FN+L+ E ++E + NDN N + G GG++A
Sbjct: 79 ----------EEFNLLKAQQEELEERL--RILLIPKDPNDNKNVIMEIRGAAGGDEA 123
>sp|Q6C8M8|ATG26_YARLI Sterol 3-beta-glucosyltransferase OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=ATG26 PE=3 SV=3
Length = 1456
Score = 33.5 bits (75), Expect = 2.7, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 130 EGSNNPSTTTSESTTGSPAPNTNPLPNPWMAAGTGGAQTNTTRSSSLGDARPQTPAGIAG 189
EGS+ P+ + +++ + P+ P P A ++T S G P TPA
Sbjct: 549 EGSDRPNLASQRTSSSTLFPSAPPTPGSQPTTPGVHAPGSSTPGGSYGTTTPGTPASADS 608
Query: 190 LSSPGFEDIFGAMQDTNSLN 209
+S G + + D LN
Sbjct: 609 VSLAGTPGVAAPVGDIEGLN 628
>sp|Q14AX6|CDK12_MOUSE Cyclin-dependent kinase 12 OS=Mus musculus GN=Cdk12 PE=1 SV=2
Length = 1484
Score = 33.1 bits (74), Expect = 3.1, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 27/154 (17%)
Query: 168 TNTTRSSSLGDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQ--------MLQNP---A 216
T+ T + + + P P + PG D G T LNQ +LQ+ +
Sbjct: 1067 TSGTTAEPVKNNSPAPPQPAPVKAEPGPGDAVGLGDITQQLNQSELAVLLNLLQSQTDLS 1126
Query: 217 VTQMMQ--SLLSNPQYMNQILGLNPQLRSMVDSNSQLR--EMIQNPEFLRQL-------- 264
+ QM Q ++ SNP+ Q+ LN + ++ +++SQ + E I E L+++
Sbjct: 1127 IPQMAQLLNIHSNPEMQQQLEALNQSISALTEASSQQQDSESIAPEESLKEVPSVPVVLP 1186
Query: 265 ----TNPETMQQMVTLQQFLLTQLGRAQSTQQPG 294
T PE +Q L L + TQ+P
Sbjct: 1187 PAEQTTPEASNTPADMQNVLAVLLSQLMKTQEPA 1220
>sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11
PE=3 SV=1
Length = 685
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 177 GDARPQTPAGIAGLSSPGFEDIFGAMQDTNSLNQMLQNPAVTQMMQSLLSNPQYMNQILG 236
G++R I L+S FE+ ++ + ++ N V +++ QY N+I
Sbjct: 372 GNSRVAIICTIT-LASNNFEESHNTLKFASRAKKISNNAKVNEILDDKALLKQYRNEIAE 430
Query: 237 LNPQLRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQ 278
L +L + + +L+E + E ++ +TN E + ++V ++
Sbjct: 431 LKSKLSDALSTEKELQETLTEKEKMK-ITNQELLHKLVDAEK 471
>sp|Q8DF81|PUR4_VIBVU Phosphoribosylformylglycinamidine synthase OS=Vibrio vulnificus
(strain CMCP6) GN=purL PE=3 SV=1
Length = 1297
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 47 PSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG 106
P+ + + A N E R + N D + +E F M++ +ET + L+A
Sbjct: 201 PNDIELMMFAQANSEHCRHKIFNADWTIDGVEQPKSLFKMIKNTFETTPDHVLSAY---- 256
Query: 107 NAGNDNSNPFAALLGTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLP---NPWMAAGT 163
DN+ A + G++ G + E T+ P +PW A T
Sbjct: 257 ---KDNA---AVMTGSKVGRFFPDPETRQYNYHHEDAHILMKVETHNHPTAISPWPGAST 310
Query: 164 G-GAQTNTTRSSSLGDARPQTPAGIAGLSS-----PGFE-----DIFGAMQDTNSLNQML 212
G G + ++ +G +P+ AG+ G ++ PGFE D + N+L+ ML
Sbjct: 311 GSGGEIRDEGATGIG-GKPK--AGLVGFTTSNLRIPGFEQPWETDFGKPGRIVNALDIML 367
Query: 213 QNP 215
+ P
Sbjct: 368 EGP 370
>sp|Q7MN70|PUR4_VIBVY Phosphoribosylformylglycinamidine synthase OS=Vibrio vulnificus
(strain YJ016) GN=purL PE=3 SV=2
Length = 1297
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 47 PSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATSMAG 106
P+ + + A N E R + N D + +E F M++ +ET + L+A
Sbjct: 201 PNDIELMMFAQANSEHCRHKIFNADWTIDGVEQPKSLFKMIKNTFETTPDHVLSAY---- 256
Query: 107 NAGNDNSNPFAALLGTQGGNQAREGSNNPSTTTSESTTGSPAPNTNPLP---NPWMAAGT 163
DN+ A + G++ G + E T+ P +PW A T
Sbjct: 257 ---KDNA---AVMTGSKVGRFFPDPETRQYNYHHEDAHILMKVETHNHPTAISPWPGAST 310
Query: 164 G-GAQTNTTRSSSLGDARPQTPAGIAGLSS-----PGFE-----DIFGAMQDTNSLNQML 212
G G + ++ +G +P+ AG+ G ++ PGFE D + N+L+ ML
Sbjct: 311 GSGGEIRDEGATGIG-GKPK--AGLVGFTTSNLRIPGFEQPWETDFGKPGRIVNALDIML 367
Query: 213 QNP 215
+ P
Sbjct: 368 EGP 370
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,348,719
Number of Sequences: 539616
Number of extensions: 5688809
Number of successful extensions: 28372
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 335
Number of HSP's that attempted gapping in prelim test: 26584
Number of HSP's gapped (non-prelim): 1777
length of query: 348
length of database: 191,569,459
effective HSP length: 118
effective length of query: 230
effective length of database: 127,894,771
effective search space: 29415797330
effective search space used: 29415797330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)