Your job contains 1 sequence.
>018939
MDSCCAAALKANAHPAVSNRNTGFWGGSVKGSLKSWDLNFGSRVWKNLRTEKINKNVTKP
GVAYSILTSDTNKETVTFQAPMFETPQADPKNVAAIILGGGAGTRLFPLTNRRAKPAVPI
GGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEVLAAT
QTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTK
ADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVK
FPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQVR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018939
(348 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2136358 - symbol:APL3 species:3702 "Arabidopsi... 1151 7.9e-117 1
TAIR|locus:2199241 - symbol:APL2 "ADPGLC-PPase large subu... 1149 1.3e-116 1
TAIR|locus:2049364 - symbol:APL4 species:3702 "Arabidopsi... 1103 9.7e-112 1
TAIR|locus:2182132 - symbol:APL1 "ADP glucose pyrophospho... 1010 6.9e-102 1
TAIR|locus:2156263 - symbol:ADG1 "ADP glucose pyrophospho... 797 2.6e-79 1
UNIPROTKB|P15280 - symbol:AGPS "Glucose-1-phosphate adeny... 790 1.4e-78 1
TAIR|locus:2032003 - symbol:APS2 "AT1G05610" species:3702... 465 3.9e-44 1
UNIPROTKB|Q9KLP4 - symbol:glgC2 "Glucose-1-phosphate aden... 404 1.1e-37 1
TIGR_CMR|VC_A0699 - symbol:VC_A0699 "glucose-1-phosphate ... 404 1.1e-37 1
UNIPROTKB|P0A6V1 - symbol:glgC "GlgC" species:83333 "Esch... 397 6.3e-37 1
TIGR_CMR|BA_5122 - symbol:BA_5122 "glucose-1-phosphate ad... 344 6.4e-37 2
TIGR_CMR|SO_1498 - symbol:SO_1498 "glucose-1-phosphate ad... 380 4.0e-35 1
UNIPROTKB|Q9KRB5 - symbol:glgC1 "Glucose-1-phosphate aden... 367 9.5e-34 1
TIGR_CMR|VC_1727 - symbol:VC_1727 "glucose-1-phosphate ad... 367 9.5e-34 1
UNIPROTKB|P64241 - symbol:glgC "Glucose-1-phosphate adeny... 341 5.4e-31 1
TIGR_CMR|BA_5121 - symbol:BA_5121 "glycogen biosynthesis ... 129 1.4e-05 1
UNIPROTKB|Q7D5T3 - symbol:mpg1 "Mannose-1-phosphate guany... 92 1.9e-05 2
TIGR_CMR|DET_1208 - symbol:DET_1208 "nucleotidyltransfera... 100 4.1e-05 2
TIGR_CMR|CHY_0976 - symbol:CHY_0976 "glucose-1-phosphate ... 89 0.00016 2
UNIPROTKB|P55253 - symbol:rmlA "Glucose-1-phosphate thymi... 85 0.00032 2
UNIPROTKB|A0QPF9 - symbol:rmlA "Glucose-1-phosphate thymi... 95 0.00037 2
UNIPROTKB|P37744 - symbol:rfbA "dTDP-glucose pyrophosphor... 84 0.00067 2
UNIPROTKB|P26393 - symbol:rmlA "Glucose-1-phosphate thymi... 85 0.00081 2
>TAIR|locus:2136358 [details] [associations]
symbol:APL3 species:3702 "Arabidopsis thaliana"
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;ISS] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA;TAS] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00152 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005978
EMBL:AL161594 EMBL:AL050351 SUPFAM:SSF51161 GO:GO:0019252
eggNOG:COG0448 KO:K00975 GO:GO:0008878 TIGRFAMs:TIGR02091
OMA:SKNHIAP BRENDA:2.7.7.27 HOGENOM:HOG000278604
ProtClustDB:PLN02241 EMBL:Y18432 EMBL:AY059862 EMBL:BT010378
EMBL:X73364 IPI:IPI00547760 PIR:T08569 RefSeq:NP_195632.1
UniGene:At.75 ProteinModelPortal:P55231 SMR:P55231 STRING:P55231
PaxDb:P55231 PRIDE:P55231 EnsemblPlants:AT4G39210.1 GeneID:830076
KEGG:ath:AT4G39210 TAIR:At4g39210 InParanoid:P55231
PhylomeDB:P55231 Genevestigator:P55231 GermOnline:AT4G39210
Uniprot:P55231
Length = 521
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 226/350 (64%), Positives = 269/350 (76%)
Query: 1 MDSCCAAALKAN---AHPAVSNRNTGFWGGSVKGS-LKSWDLNFGSRVWKNLRTEKINKN 56
MDSCC +L A + N F G +KGS LK + + S K R K+
Sbjct: 1 MDSCCNFSLGTKTVLAKDSFKNVENKFLGEKIKGSVLKPFSSDLSS---KKFRNRKL--- 54
Query: 57 VTKPGVAYSILTSDTNKETVTFQAPMFETPQADPKNVAAIILGGGAGTRLFPLTNRRAKP 116
+PGVAY+I TS KE + Q MFE +ADPKNVAAIILGGG G +LFPLT R A P
Sbjct: 55 --RPGVAYAIATSKNAKEALKNQPSMFERRRADPKNVAAIILGGGDGAKLFPLTKRAATP 112
Query: 117 AVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEV 176
AVP+GG YR+IDIPMSNCINS NKIF++TQFNS SLNRHLAR+Y GNG+NFGDGFVEV
Sbjct: 113 AVPVGGCYRMIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTY-FGNGINFGDGFVEV 171
Query: 177 LAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKH 236
LAATQTPGEAGKKWFQGTADAVR+F+WVFEDAKN+N+EN++ILSGDHLYRM+Y +F+Q H
Sbjct: 172 LAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENIIILSGDHLYRMNYMDFVQHH 231
Query: 237 IDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP 296
+D+KADIT+SC P+D+ RAS+YGL+ IDRSG+++ F+EKP G DLK MQ DTT+ GLS
Sbjct: 232 VDSKADITLSCAPVDESRASEYGLVNIDRSGRVVHFSEKPTGIDLKSMQTDTTMHGLSHQ 291
Query: 297 DAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQ 346
+A K PYIASMGVY F+T+ LL LL YP SNDFGSEIIPA++KDHNVQ
Sbjct: 292 EAAKSPYIASMGVYCFKTEALLKLLTWRYPSSNDFGSEIIPAAIKDHNVQ 341
>TAIR|locus:2199241 [details] [associations]
symbol:APL2 "ADPGLC-PPase large subunit" species:3702
"Arabidopsis thaliana" [GO:0008878 "glucose-1-phosphate
adenylyltransferase activity" evidence=IEA;ISS;IDA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0019252 "starch biosynthetic process"
evidence=TAS] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00152 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009507 GO:GO:0005978
EMBL:AC012375 SUPFAM:SSF51161 GO:GO:0019252 eggNOG:COG0448
KO:K00975 OMA:PAKFVHE GO:GO:0008878 TIGRFAMs:TIGR02091
BRENDA:2.7.7.27 HOGENOM:HOG000278604 ProtClustDB:PLN02241
EMBL:AY063927 EMBL:AY091251 EMBL:X73366 IPI:IPI00518848 PIR:G86401
RefSeq:NP_174089.1 UniGene:At.16637 ProteinModelPortal:P55230
SMR:P55230 STRING:P55230 PaxDb:P55230 PRIDE:P55230
EnsemblPlants:AT1G27680.1 GeneID:839660 KEGG:ath:AT1G27680
TAIR:At1g27680 InParanoid:P55230 PhylomeDB:P55230
Genevestigator:P55230 GermOnline:AT1G27680 Uniprot:P55230
Length = 518
Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
Identities = 234/352 (66%), Positives = 276/352 (78%)
Query: 1 MDSCCAAALKANA------HPAVSNRNTGFWGGSVKGSLKSWDLNFGSRVWKNLRTEKIN 54
M+SC A +K N + VS R + FWG V +K L + ++ +KI
Sbjct: 1 MESCFPA-MKLNQCTFGLNNEIVSERVSAFWGTQV---VKPNHLR--TTKLRSAPQKKIQ 54
Query: 55 KNVTKPGVAYSILTSDTNKETVTFQAPMFETPQADPKNVAAIILGGGAGTRLFPLTNRRA 114
N+ + S+LT ++E+ P+ T ADPKNVA+IILGGGAGTRLFPLT++RA
Sbjct: 55 TNLIR-----SVLTPFVDQES---HEPLLRTQNADPKNVASIILGGGAGTRLFPLTSKRA 106
Query: 115 KPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFV 174
KPAVPIGG YRLIDIPMSNCINSG KIFI+TQFNSFSLNRHL+R+YN GNGVNFGDGFV
Sbjct: 107 KPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYNFGNGVNFGDGFV 166
Query: 175 EVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQ 234
EVLAATQT G+AGKKWFQGTADAVRQFIWVFEDAK KNVE+VLILSGDHLYRMDY F+Q
Sbjct: 167 EVLAATQTSGDAGKKWFQGTADAVRQFIWVFEDAKTKNVEHVLILSGDHLYRMDYMNFVQ 226
Query: 235 KHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLS 294
KHI++ ADITVSC+PMD+ RASD+GL+KID+SG+IIQF+EKPKG DLK MQ DT++LGL
Sbjct: 227 KHIESNADITVSCLPMDESRASDFGLLKIDQSGKIIQFSEKPKGDDLKAMQVDTSILGLP 286
Query: 295 MPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQ 346
+A + PYIASMGVY+FR +VLL LLRSSYP SNDFGSEIIP +V +HNVQ
Sbjct: 287 PKEAAESPYIASMGVYVFRKEVLLKLLRSSYPTSNDFGSEIIPLAVGEHNVQ 338
>TAIR|locus:2049364 [details] [associations]
symbol:APL4 species:3702 "Arabidopsis thaliana"
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;ISS;IDA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0010170
"glucose-1-phosphate adenylyltransferase complex" evidence=IDA]
[GO:0019252 "starch biosynthetic process" evidence=RCA;TAS]
[GO:0009853 "photorespiration" evidence=RCA] InterPro:IPR005835
InterPro:IPR005836 InterPro:IPR011004 InterPro:IPR011831
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00152 GO:GO:0005524 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005978 SUPFAM:SSF51161
EMBL:AC007119 GO:GO:0019252 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 BRENDA:2.7.7.27 HOGENOM:HOG000278604
ProtClustDB:PLN02241 EMBL:AY070429 EMBL:AY096657 IPI:IPI00523462
PIR:A84603 RefSeq:NP_001031391.1 RefSeq:NP_179753.1
UniGene:At.28357 ProteinModelPortal:Q9SIK1 SMR:Q9SIK1 IntAct:Q9SIK1
STRING:Q9SIK1 PaxDb:Q9SIK1 PRIDE:Q9SIK1 EnsemblPlants:AT2G21590.1
EnsemblPlants:AT2G21590.2 GeneID:816697 KEGG:ath:AT2G21590
TAIR:At2g21590 InParanoid:Q9SIK1 OMA:EANMELI PhylomeDB:Q9SIK1
Genevestigator:Q9SIK1 GermOnline:AT2G21590 GO:GO:0010170
Uniprot:Q9SIK1
Length = 523
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 217/350 (62%), Positives = 267/350 (76%)
Query: 1 MDSCCAAALKANAH--PAVSNRNTG--FWGGSVKGSLKSWDLNFGSRVWKNLRTEKINKN 56
MDS + AL ++ P +S RN F+G K + FGS +L ++K
Sbjct: 1 MDSSYSFALGTSSSILPKLSFRNVENRFYGE--KNNNNGLCKRFGS----DLGSKKFRNQ 54
Query: 57 VTKPGVAYSILTSDTNKETVTFQAPMFETPQADPKNVAAIILGGGAGTRLFPLTNRRAKP 116
K GV Y++ TSD K+ +T + MFE + DP+NVAAIILGGG G +LFPLT R A P
Sbjct: 55 KFKHGVVYAVATSDNPKKAMTVKTSMFERRKVDPQNVAAIILGGGNGAKLFPLTMRAATP 114
Query: 117 AVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEV 176
AVP+GG YRLIDIPMSNCINS NKIF++TQFNS SLNRHLAR+Y GNG+NFG GFVEV
Sbjct: 115 AVPVGGCYRLIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTY-FGNGINFGGGFVEV 173
Query: 177 LAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKH 236
LAATQTPGEAGKKWFQGTADAVR+F+WVFEDAKN+N+EN+LILSGDHLYRM+Y +F+Q H
Sbjct: 174 LAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENILILSGDHLYRMNYMDFVQSH 233
Query: 237 IDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP 296
+D+ ADIT+SC P+ + RAS++GL+KIDR G++I F+EKP G DLK MQ DTT+LGLS
Sbjct: 234 VDSNADITLSCAPVSESRASNFGLVKIDRGGRVIHFSEKPTGVDLKSMQTDTTMLGLSHQ 293
Query: 297 DAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQ 346
+A PYIASMGVY F+T+ LLNLL YP SNDFGSE+IPA+++DH+VQ
Sbjct: 294 EATDSPYIASMGVYCFKTEALLNLLTRQYPSSNDFGSEVIPAAIRDHDVQ 343
>TAIR|locus:2182132 [details] [associations]
symbol:APL1 "ADP glucose pyrophosphorylase large subunit
1" species:3702 "Arabidopsis thaliana" [GO:0008878
"glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;ISS;IDA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0006098 "pentose-phosphate
shunt" evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010114 "response to red
light" evidence=RCA] [GO:0010218 "response to far red light"
evidence=RCA] [GO:0015979 "photosynthesis" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809
PROSITE:PS00810 UniPathway:UPA00152 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0009941 GO:GO:0005978
SUPFAM:SSF51161 EMBL:AC069326 GO:GO:0019252 eggNOG:COG0448
KO:K00975 GO:GO:0008878 TIGRFAMs:TIGR02091 BRENDA:2.7.7.27
OMA:FCNINEA EMBL:U72290 EMBL:AB022891 EMBL:X73367 EMBL:BT008884
EMBL:AF370503 IPI:IPI00537023 PIR:S42548 PIR:T52629
RefSeq:NP_197423.1 UniGene:At.31320 UniGene:At.429 UniGene:At.69509
ProteinModelPortal:P55229 SMR:P55229 STRING:P55229 PaxDb:P55229
PRIDE:P55229 EnsemblPlants:AT5G19220.1 GeneID:832042
KEGG:ath:AT5G19220 TAIR:At5g19220 HOGENOM:HOG000278604
InParanoid:P55229 PhylomeDB:P55229 ProtClustDB:PLN02241
BioCyc:ARA:AT5G19220-MONOMER BioCyc:MetaCyc:MONOMER-1823
Genevestigator:P55229 GermOnline:AT5G19220 Uniprot:P55229
Length = 522
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 187/262 (71%), Positives = 226/262 (86%)
Query: 84 ETPQADPKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIF 143
ET + DP+ VA+IILGGGAGTRLFPLT RRAKPAVPIGG YRLID+PMSNCINSG NK++
Sbjct: 81 ETEKRDPRTVASIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVY 140
Query: 144 IMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIW 203
I+TQ+NS SLNRHLAR+YN NG+ FGDG+VEVLAATQTPGE+GK+WFQGTADAVRQF W
Sbjct: 141 ILTQYNSASLNRHLARAYN-SNGLGFGDGYVEVLAATQTPGESGKRWFQGTADAVRQFHW 199
Query: 204 VFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKI 263
+FEDA++K++E+VLILSGDHLYRMDY +F+Q H + ADI++SC+P+DD RASD+GLMKI
Sbjct: 200 LFEDARSKDIEDVLILSGDHLYRMDYMDFIQDHRQSGADISISCIPIDDRRASDFGLMKI 259
Query: 264 DRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS 323
D G++I F+EKPKG DLK M DTT+LGLS +A K PYIASMGVY+F+ ++LLNLLR
Sbjct: 260 DDKGRVISFSEKPKGDDLKAMAVDTTILGLSKEEAEKKPYIASMGVYVFKKEILLNLLRW 319
Query: 324 SYPLSNDFGSEIIPASVKDHNV 345
+P +NDFGSEIIP S K+ V
Sbjct: 320 RFPTANDFGSEIIPFSAKEFYV 341
>TAIR|locus:2156263 [details] [associations]
symbol:ADG1 "ADP glucose pyrophosphorylase 1"
species:3702 "Arabidopsis thaliana" [GO:0008878
"glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;ISS;IMP;IDA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0019252 "starch biosynthetic process"
evidence=RCA;IMP;TAS] [GO:0048573 "photoperiodism, flowering"
evidence=IMP] [GO:0000023 "maltose metabolic process" evidence=RCA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009644 "response to
high light intensity" evidence=RCA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010114 "response to red light"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0010218 "response to far red light" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0019760
"glucosinolate metabolic process" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0043085
"positive regulation of catalytic activity" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0030931
"heterotetrameric ADPG pyrophosphorylase complex" evidence=IMP]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809
PROSITE:PS00810 UniPathway:UPA00152 GO:GO:0005829 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0048046
GO:GO:0005978 GO:GO:0048573 EMBL:AP000372 SUPFAM:SSF51161
GO:GO:0009501 GO:GO:0019252 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 BRENDA:2.7.7.27 HOGENOM:HOG000278604
ProtClustDB:PLN02241 EMBL:U72351 EMBL:U70616 EMBL:AB039889
EMBL:AY049265 EMBL:AY065428 EMBL:AY090283 EMBL:AY096379 EMBL:X73365
IPI:IPI00542391 RefSeq:NP_199641.1 UniGene:At.670
ProteinModelPortal:P55228 SMR:P55228 IntAct:P55228 STRING:P55228
PaxDb:P55228 PRIDE:P55228 EnsemblPlants:AT5G48300.1 GeneID:834883
KEGG:ath:AT5G48300 TAIR:At5g48300 InParanoid:P55228 OMA:DEESAHD
PhylomeDB:P55228 BioCyc:MetaCyc:MONOMER-1822 Genevestigator:P55228
GermOnline:AT5G48300 GO:GO:0030931 Uniprot:P55228
Length = 520
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 156/256 (60%), Positives = 199/256 (77%)
Query: 86 PQADPKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIM 145
P A +V IILGGGAGTRL+PLT +RAKPAVP+G NYRLIDIP+SNC+NS +KI+++
Sbjct: 84 PDAS-SSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVL 142
Query: 146 TQFNSFSLNRHLARSY--NLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIW 203
TQFNS SLNRHL+R+Y N+G N +GFVEVLAA Q+P WFQGTADAVRQ++W
Sbjct: 143 TQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP--ENPNWFQGTADAVRQYLW 198
Query: 204 VFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKI 263
+FE+ NV LIL+GDHLYRMDY +F+Q H +T ADITV+ +PMD+ RA+ +GLMKI
Sbjct: 199 LFEE---HNVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEQRATAFGLMKI 255
Query: 264 DRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS 323
D G+II+FAEKPKG LK M+ DTT+LGL A + P+IASMG+Y+ DV+L+LLR+
Sbjct: 256 DEEGRIIEFAEKPKGEHLKAMKVDTTILGLDDQRAKEMPFIASMGIYVVSRDVMLDLLRN 315
Query: 324 SYPLSNDFGSEIIPAS 339
+P +NDFGSE+IP +
Sbjct: 316 QFPGANDFGSEVIPGA 331
>UNIPROTKB|P15280 [details] [associations]
symbol:AGPS "Glucose-1-phosphate adenylyltransferase small
subunit, chloroplastic/amyloplastic" species:39947 "Oryza sativa
Japonica Group" [GO:0005982 "starch metabolic process"
evidence=IEP] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00152 GO:GO:0005524
GO:GO:0009570 GO:GO:0048046 GO:GO:0005978 GO:GO:0048573
EMBL:AP008214 SUPFAM:SSF51161 GO:GO:0009501 GO:GO:0005982
GO:GO:0019252 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 BRENDA:2.7.7.27 HOGENOM:HOG000278604
ProtClustDB:PLN02241 OMA:DEESAHD GO:GO:0030931 EMBL:J04960
EMBL:M31616 EMBL:D83539 EMBL:EF122437 EMBL:AP004459 EMBL:AK071826
EMBL:AK103906 EMBL:AF378188 PIR:A34318 PIR:JU0444
RefSeq:NP_001061603.1 UniGene:Os.178 ProteinModelPortal:P15280
SMR:P15280 STRING:P15280 EnsemblPlants:LOC_Os08g25734.1
GeneID:4345339 KEGG:osa:4345339 Gramene:P15280 Uniprot:P15280
Length = 514
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 154/256 (60%), Positives = 196/256 (76%)
Query: 86 PQADPKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIM 145
P A +V IILGGGAGTRL+PLT +RAKPAVP+G NYRLIDIP+SNC+NS +KI+++
Sbjct: 78 PDAST-SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVL 136
Query: 146 TQFNSFSLNRHLARSY--NLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIW 203
TQFNS SLNRHL+R+Y N+G N +GFVEVLAA Q+P WFQGTADAVRQ++W
Sbjct: 137 TQFNSASLNRHLSRAYGNNIGGYKN--EGFVEVLAAQQSPDNPN--WFQGTADAVRQYLW 192
Query: 204 VFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKI 263
+FE+ NV LIL+GDHLYRMDY +F+Q H +T +DITV+ +PMD+ RA+ +GLMKI
Sbjct: 193 LFEE---HNVMEFLILAGDHLYRMDYEKFIQAHRETDSDITVAALPMDEKRATAFGLMKI 249
Query: 264 DRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS 323
D G+I++FAEKPKG LK M DTT+LGL A + PYIASMG+Y+ +V+L LLR
Sbjct: 250 DEEGRIVEFAEKPKGEQLKAMMVDTTILGLDDVRAKEMPYIASMGIYVISKNVMLQLLRE 309
Query: 324 SYPLSNDFGSEIIPAS 339
+P +NDFGSE+IP +
Sbjct: 310 QFPGANDFGSEVIPGA 325
>TAIR|locus:2032003 [details] [associations]
symbol:APS2 "AT1G05610" species:3702 "Arabidopsis
thaliana" [GO:0008878 "glucose-1-phosphate adenylyltransferase
activity" evidence=ISS] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 Pfam:PF00483 PROSITE:PS00809 EMBL:CP002684
GO:GO:0005978 SUPFAM:SSF51161 KO:K00975 GO:GO:0008878
IPI:IPI00524967 RefSeq:NP_172052.2 ProteinModelPortal:F4I8U2
SMR:F4I8U2 PRIDE:F4I8U2 EnsemblPlants:AT1G05610.1 GeneID:837066
KEGG:ath:AT1G05610 OMA:KVGVLTQ ArrayExpress:F4I8U2 Uniprot:F4I8U2
Length = 476
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 105/254 (41%), Positives = 154/254 (60%)
Query: 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNS 150
++VAAI+ GGG+ + L+PLT R+K A+PI NYRLID +SNCINSG KI+ +TQFNS
Sbjct: 53 QSVAAIVFGGGSDSELYPLTKTRSKGAIPIAANYRLIDAVISNCINSGITKIYAITQFNS 112
Query: 151 FSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKN 210
SLN HL+++Y+ G G+ D FVEV+AA Q+ + G WFQGTADA+R+ +WVFE+
Sbjct: 113 TSLNSHLSKAYS-GFGLG-KDRFVEVIAAYQSLEDQG--WFQGTADAIRRCLWVFEEFP- 167
Query: 211 KNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGL--MKIDRSGQ 268
V L+L G HLY+MDY ++ H ++ADIT+ V + D+G M++D +
Sbjct: 168 --VTEFLVLPGHHLYKMDYKMLIEDHRRSRADITI--VGLSSVTDHDFGFGFMEVDSTNA 223
Query: 269 IIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLS 328
+ +F K + DL + T + D + S G+Y+ + ++ LLR S
Sbjct: 224 VTRFTIKGQ-QDLISVANRTA----TRSDGTSSCSVPSAGIYVIGREQMVKLLRECLIKS 278
Query: 329 NDFGSEIIPASVKD 342
D SEIIP ++ +
Sbjct: 279 KDLASEIIPGAISE 292
>UNIPROTKB|Q9KLP4 [details] [associations]
symbol:glgC2 "Glucose-1-phosphate adenylyltransferase 2"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0005978 "glycogen biosynthetic process" evidence=ISS]
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=ISS] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 InterPro:IPR023049
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00164 HAMAP:MF_00624 GO:GO:0005524 GO:GO:0005978
EMBL:AE003853 GenomeReviews:AE003853_GR SUPFAM:SSF51161
eggNOG:COG0448 KO:K00975 GO:GO:0008878 TIGRFAMs:TIGR02091
PIR:C82428 RefSeq:NP_233086.1 ProteinModelPortal:Q9KLP4
DNASU:2612101 GeneID:2612101 KEGG:vch:VCA0699 PATRIC:20085946
OMA:SKNHIAP ProtClustDB:PRK00725 Uniprot:Q9KLP4
Length = 407
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 80/189 (42%), Positives = 124/189 (65%)
Query: 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNS 150
++ A+IL GG G+RL PLT+ RAKPAVP GG YR+ID ++NC++SG +I ++TQ+ S
Sbjct: 2 QDTLAVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRRILVLTQYKS 61
Query: 151 FSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKN 210
SL++HL +++ N G+ F+ V+ G GK W++GTADA+ +W+ A++
Sbjct: 62 HSLHKHLRNGWSIFNP-ELGE-FITVVPPQMRKG--GK-WYEGTADALFHNMWLL--ARS 114
Query: 211 KNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQII 270
+ + V++LSGDH+YRMDY L++HI A +T++C+ + AS +G+M ID +I
Sbjct: 115 -DAKYVVVLSGDHIYRMDYAAMLEEHISKNATLTIACMQVPRHEASAFGVMAIDDDSRIT 173
Query: 271 QFAEKPKGP 279
F EKP P
Sbjct: 174 CFVEKPADP 182
Score = 202 (76.2 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 49/133 (36%), Positives = 72/133 (54%)
Query: 216 VLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEK 275
V++LSGDH+YRMDY L++HI A +T++C+ + AS +G+M ID +I F EK
Sbjct: 119 VVVLSGDHIYRMDYAAMLEEHISKNATLTIACMQVPRHEASAFGVMAIDDDSRITCFVEK 178
Query: 276 PKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL---SNDFG 332
P P C + PD +ASMG+Y+F DVL L + S+DFG
Sbjct: 179 PADPP-----CIP-----NRPDHS----LASMGIYIFNMDVLKKALTEDAEIEQSSHDFG 224
Query: 333 SEIIPASVKDHNV 345
++IP + +V
Sbjct: 225 KDVIPKLIATGSV 237
>TIGR_CMR|VC_A0699 [details] [associations]
symbol:VC_A0699 "glucose-1-phosphate adenylyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0005978
"glycogen biosynthetic process" evidence=ISS] [GO:0008878
"glucose-1-phosphate adenylyltransferase activity" evidence=ISS]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 InterPro:IPR023049 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00164 HAMAP:MF_00624
GO:GO:0005524 GO:GO:0005978 EMBL:AE003853 GenomeReviews:AE003853_GR
SUPFAM:SSF51161 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 PIR:C82428 RefSeq:NP_233086.1
ProteinModelPortal:Q9KLP4 DNASU:2612101 GeneID:2612101
KEGG:vch:VCA0699 PATRIC:20085946 OMA:SKNHIAP ProtClustDB:PRK00725
Uniprot:Q9KLP4
Length = 407
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 80/189 (42%), Positives = 124/189 (65%)
Query: 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNS 150
++ A+IL GG G+RL PLT+ RAKPAVP GG YR+ID ++NC++SG +I ++TQ+ S
Sbjct: 2 QDTLAVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRRILVLTQYKS 61
Query: 151 FSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKN 210
SL++HL +++ N G+ F+ V+ G GK W++GTADA+ +W+ A++
Sbjct: 62 HSLHKHLRNGWSIFNP-ELGE-FITVVPPQMRKG--GK-WYEGTADALFHNMWLL--ARS 114
Query: 211 KNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQII 270
+ + V++LSGDH+YRMDY L++HI A +T++C+ + AS +G+M ID +I
Sbjct: 115 -DAKYVVVLSGDHIYRMDYAAMLEEHISKNATLTIACMQVPRHEASAFGVMAIDDDSRIT 173
Query: 271 QFAEKPKGP 279
F EKP P
Sbjct: 174 CFVEKPADP 182
Score = 202 (76.2 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 49/133 (36%), Positives = 72/133 (54%)
Query: 216 VLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEK 275
V++LSGDH+YRMDY L++HI A +T++C+ + AS +G+M ID +I F EK
Sbjct: 119 VVVLSGDHIYRMDYAAMLEEHISKNATLTIACMQVPRHEASAFGVMAIDDDSRITCFVEK 178
Query: 276 PKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL---SNDFG 332
P P C + PD +ASMG+Y+F DVL L + S+DFG
Sbjct: 179 PADPP-----CIP-----NRPDHS----LASMGIYIFNMDVLKKALTEDAEIEQSSHDFG 224
Query: 333 SEIIPASVKDHNV 345
++IP + +V
Sbjct: 225 KDVIPKLIATGSV 237
>UNIPROTKB|P0A6V1 [details] [associations]
symbol:glgC "GlgC" species:83333 "Escherichia coli K-12"
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0016208 "AMP
binding" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=IEA;IDA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA;IMP] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 InterPro:IPR023049
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00164 HAMAP:MF_00624 GO:GO:0005524 GO:GO:0000287
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0016208 GO:GO:0005978
SUPFAM:SSF51161 EMBL:V00281 EMBL:J01616 eggNOG:COG0448 KO:K00975
GO:GO:0008878 TIGRFAMs:TIGR02091 ProtClustDB:PRK00725 OMA:ACMEVPI
EMBL:M97226 EMBL:S58224 PIR:A00721 RefSeq:NP_417888.1
RefSeq:YP_492003.1 ProteinModelPortal:P0A6V1 SMR:P0A6V1
DIP:DIP-48147N IntAct:P0A6V1 PRIDE:P0A6V1
EnsemblBacteria:EBESCT00000002168 EnsemblBacteria:EBESCT00000002169
EnsemblBacteria:EBESCT00000002170 EnsemblBacteria:EBESCT00000017859
GeneID:12933508 GeneID:947942 KEGG:ecj:Y75_p3747 KEGG:eco:b3430
PATRIC:32122300 EchoBASE:EB0374 EcoGene:EG10379
HOGENOM:HOG000278607 BioCyc:EcoCyc:GLUC1PADENYLTRANS-MONOMER
BioCyc:ECOL316407:JW3393-MONOMER
BioCyc:MetaCyc:GLUC1PADENYLTRANS-MONOMER BRENDA:2.7.7.27
Genevestigator:P0A6V1 Uniprot:P0A6V1
Length = 431
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 82/190 (43%), Positives = 121/190 (63%)
Query: 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFN 149
P A+IL GG GTRL LTN+RAKPAV GG +R+ID +SNCINSG ++ ++TQ+
Sbjct: 17 PLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQ 76
Query: 150 SFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAK 209
S +L +H+ R ++ N + FV++L A Q G+ W++GTADAV Q + + K
Sbjct: 77 SHTLVQHIQRGWSFFNEEM--NEFVDLLPAQQRM--KGENWYRGTADAVTQNLDIIRRYK 132
Query: 210 NKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQI 269
E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ AS +G+M +D + +I
Sbjct: 133 ---AEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKI 189
Query: 270 IQFAEKPKGP 279
I+F EKP P
Sbjct: 190 IEFVEKPANP 199
Score = 201 (75.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 50/128 (39%), Positives = 72/128 (56%)
Query: 214 ENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFA 273
E V+IL+GDH+Y+ DY+ L H++ A TV+C+P+ AS +G+M +D + +II+F
Sbjct: 134 EYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFV 193
Query: 274 EKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRSS---YPLSN 329
EKP P SMP D K +ASMG+Y+F D L LL S+
Sbjct: 194 EKPANPP-------------SMPNDPSKS--LASMGIYVFDADYLYELLEEDDRDENSSH 238
Query: 330 DFGSEIIP 337
DFG ++IP
Sbjct: 239 DFGKDLIP 246
>TIGR_CMR|BA_5122 [details] [associations]
symbol:BA_5122 "glucose-1-phosphate adenylyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0005978 "glycogen
biosynthetic process" evidence=ISS] [GO:0008878
"glucose-1-phosphate adenylyltransferase activity" evidence=ISS]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 InterPro:IPR023049 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00164 HAMAP:MF_00624
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005978 SUPFAM:SSF51161
eggNOG:COG0448 KO:K00975 GO:GO:0008878 TIGRFAMs:TIGR02091
RefSeq:NP_847308.1 RefSeq:YP_021775.1 RefSeq:YP_031004.1
ProteinModelPortal:Q81K83 IntAct:Q81K83 DNASU:1084437
EnsemblBacteria:EBBACT00000008623 EnsemblBacteria:EBBACT00000014574
EnsemblBacteria:EBBACT00000022476 GeneID:1084437 GeneID:2819783
GeneID:2849401 KEGG:ban:BA_5122 KEGG:bar:GBAA_5122 KEGG:bat:BAS4760
HOGENOM:HOG000278603 OMA:ACMEVPI ProtClustDB:PRK05293
BioCyc:BANT260799:GJAJ-4814-MONOMER
BioCyc:BANT261594:GJ7F-4974-MONOMER Uniprot:Q81K83
Length = 376
Score = 344 (126.2 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 78/196 (39%), Positives = 114/196 (58%)
Query: 88 ADPKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQ 147
A + A++L GG G+RL LT AKPAVP GG YR+ID +SNC NSG + I+TQ
Sbjct: 2 AQKQKCVAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQ 61
Query: 148 FNSFSLNRHLARSYNLGNGVNFG--DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVF 205
+ L+ ++ +GN + G V VL +G KW+ GTA A+ Q +
Sbjct: 62 YQPLELHNYIG----IGNAWDLDRVSGGVTVLPPYAE--SSGVKWYTGTASAIYQNLNYL 115
Query: 206 EDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSC--VPMDDCRASDYGLMKI 263
+ E VLILSGDH+Y+MDY++ L HI+ +AD+++S VP D+ AS +G+M
Sbjct: 116 SQYEP---EYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDE--ASRFGIMNT 170
Query: 264 DRSGQIIQFAEKPKGP 279
+ +I++F EKP+ P
Sbjct: 171 NEEMEIVEFEEKPQFP 186
Score = 69 (29.3 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 300 KFPY--IASMGVYLFRTDVLLNLLR--SSYP-LSNDFGSEIIP 337
+FP +ASMG+Y+F +L L + P SNDFG +++P
Sbjct: 184 QFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLP 226
>TIGR_CMR|SO_1498 [details] [associations]
symbol:SO_1498 "glucose-1-phosphate adenylyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0005978 "glycogen
biosynthetic process" evidence=ISS] [GO:0008878
"glucose-1-phosphate adenylyltransferase activity" evidence=ISS]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 InterPro:IPR023049 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00164 HAMAP:MF_00624
GO:GO:0005524 GO:GO:0005978 EMBL:AE014299 GenomeReviews:AE014299_GR
SUPFAM:SSF51161 eggNOG:COG0448 KO:K00975 GO:GO:0008878
TIGRFAMs:TIGR02091 ProtClustDB:PRK00725 HOGENOM:HOG000278603
RefSeq:NP_717115.1 ProteinModelPortal:Q8EGU3 SMR:Q8EGU3
GeneID:1169308 KEGG:son:SO_1498 PATRIC:23522638 OMA:FCNINEA
Uniprot:Q8EGU3
Length = 420
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 84/187 (44%), Positives = 122/187 (65%)
Query: 95 AIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLN 154
A+IL GG G+RL LT+ RAKPA+ GG +R+ID P+SNCINSG ++ ++TQ+ S SL
Sbjct: 16 ALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLI 75
Query: 155 RHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVE 214
RH+ R + G+ VE+L A+Q E W+QGTADAV Q I + +++ +
Sbjct: 76 RHVMRGWGHFKK-ELGES-VEILPASQRYSE---NWYQGTADAVFQNIDII---RHELPK 127
Query: 215 NVLILSGDHLYRMDYTEFLQKHIDTKADITVSC--VPMDDCRASDYGLMKIDRSGQIIQF 272
V++LSGDH+YRMDY L H ++ AD+TVSC VP+ + A +G+M++D +I+ F
Sbjct: 128 YVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPVAEA-AGAFGVMEVDDDMRILGF 186
Query: 273 AEKPKGP 279
EKP+ P
Sbjct: 187 EEKPQLP 193
Score = 243 (90.6 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 66/177 (37%), Positives = 99/177 (55%)
Query: 174 VEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFL 233
VE+L A+Q E W+QGTADAV Q I + +++ + V++LSGDH+YRMDY L
Sbjct: 93 VEILPASQRYSE---NWYQGTADAVFQNIDII---RHELPKYVMVLSGDHVYRMDYAGLL 146
Query: 234 QKHIDTKADITVSC--VPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLL 291
H ++ AD+TVSC VP+ + A +G+M++D +I+ F EKP+ P C
Sbjct: 147 AAHAESGADMTVSCLEVPVAEA-AGAFGVMEVDDDMRILGFEEKPQLPK----HCPGN-- 199
Query: 292 GLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNV 345
P+ +ASMG Y+F T+ L L+ + DFG +IIP+ ++ H V
Sbjct: 200 ----PEKC----LASMGNYVFNTEFLFEQLKKDAQNAESDRDFGKDIIPSIIEKHKV 248
>UNIPROTKB|Q9KRB5 [details] [associations]
symbol:glgC1 "Glucose-1-phosphate adenylyltransferase 1"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0005978 "glycogen biosynthetic process" evidence=ISS]
[GO:0008878 "glucose-1-phosphate adenylyltransferase activity"
evidence=ISS] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 InterPro:IPR023049
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00164 HAMAP:MF_00624 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005978 SUPFAM:SSF51161 PIR:G82165
RefSeq:NP_231363.1 ProteinModelPortal:Q9KRB5 DNASU:2613732
GeneID:2613732 KEGG:vch:VC1727 PATRIC:20082514 eggNOG:COG0448
KO:K00975 OMA:PAKFVHE ProtClustDB:PRK00844 GO:GO:0008878
TIGRFAMs:TIGR02091 Uniprot:Q9KRB5
Length = 405
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 74/187 (39%), Positives = 117/187 (62%)
Query: 93 VAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFS 152
V +IL GG G+RL PLT R KPAVP GG+YRLID ++N +N+ +I+++TQF S S
Sbjct: 4 VLGMILAGGEGSRLKPLTETRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQS 63
Query: 153 LNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKN 212
L H+ + +NL +G+ D F++++ A G K+W++GTADA+ Q + E
Sbjct: 64 LYIHMKKGWNL-SGIT--DRFIDIIPAQMRDG---KRWYEGTADAIYQNLRFVEIVAP-- 115
Query: 213 VENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQF 272
+ V I DH+Y+MD + L H +A++TVS + M +AS +G++++D +G+++ F
Sbjct: 116 -DQVCIFGSDHIYKMDIRQMLDFHRRMEAELTVSALRMPISQASQFGVIEVDENGKMVGF 174
Query: 273 AEKPKGP 279
EKP P
Sbjct: 175 EEKPSNP 181
Score = 206 (77.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 51/154 (33%), Positives = 83/154 (53%)
Query: 187 GKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVS 246
GK+W++GTADA+ Q + E + V I DH+Y+MD + L H +A++TVS
Sbjct: 92 GKRWYEGTADAIYQNLRFVEIVAP---DQVCIFGSDHIYKMDIRQMLDFHRRMEAELTVS 148
Query: 247 CVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIAS 306
+ M +AS +G++++D +G+++ F EKP P S+P ++ + S
Sbjct: 149 ALRMPISQASQFGVIEVDENGKMVGFEEKPSNPK-------------SIPGEPEWALV-S 194
Query: 307 MGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIP 337
MG Y+F + L LR + S+DFG +IIP
Sbjct: 195 MGNYIFEAETLSKELREDAENNQSSHDFGKDIIP 228
>TIGR_CMR|VC_1727 [details] [associations]
symbol:VC_1727 "glucose-1-phosphate adenylyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0005978
"glycogen biosynthetic process" evidence=ISS] [GO:0008878
"glucose-1-phosphate adenylyltransferase activity" evidence=ISS]
InterPro:IPR005835 InterPro:IPR005836 InterPro:IPR011004
InterPro:IPR011831 InterPro:IPR023049 Pfam:PF00483 PROSITE:PS00808
PROSITE:PS00809 PROSITE:PS00810 UniPathway:UPA00164 HAMAP:MF_00624
GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005978
SUPFAM:SSF51161 PIR:G82165 RefSeq:NP_231363.1
ProteinModelPortal:Q9KRB5 DNASU:2613732 GeneID:2613732
KEGG:vch:VC1727 PATRIC:20082514 eggNOG:COG0448 KO:K00975
OMA:PAKFVHE ProtClustDB:PRK00844 GO:GO:0008878 TIGRFAMs:TIGR02091
Uniprot:Q9KRB5
Length = 405
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 74/187 (39%), Positives = 117/187 (62%)
Query: 93 VAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFS 152
V +IL GG G+RL PLT R KPAVP GG+YRLID ++N +N+ +I+++TQF S S
Sbjct: 4 VLGMILAGGEGSRLKPLTETRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQS 63
Query: 153 LNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKN 212
L H+ + +NL +G+ D F++++ A G K+W++GTADA+ Q + E
Sbjct: 64 LYIHMKKGWNL-SGIT--DRFIDIIPAQMRDG---KRWYEGTADAIYQNLRFVEIVAP-- 115
Query: 213 VENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQF 272
+ V I DH+Y+MD + L H +A++TVS + M +AS +G++++D +G+++ F
Sbjct: 116 -DQVCIFGSDHIYKMDIRQMLDFHRRMEAELTVSALRMPISQASQFGVIEVDENGKMVGF 174
Query: 273 AEKPKGP 279
EKP P
Sbjct: 175 EEKPSNP 181
Score = 206 (77.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 51/154 (33%), Positives = 83/154 (53%)
Query: 187 GKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVS 246
GK+W++GTADA+ Q + E + V I DH+Y+MD + L H +A++TVS
Sbjct: 92 GKRWYEGTADAIYQNLRFVEIVAP---DQVCIFGSDHIYKMDIRQMLDFHRRMEAELTVS 148
Query: 247 CVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIAS 306
+ M +AS +G++++D +G+++ F EKP P S+P ++ + S
Sbjct: 149 ALRMPISQASQFGVIEVDENGKMVGFEEKPSNPK-------------SIPGEPEWALV-S 194
Query: 307 MGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIP 337
MG Y+F + L LR + S+DFG +IIP
Sbjct: 195 MGNYIFEAETLSKELREDAENNQSSHDFGKDIIP 228
>UNIPROTKB|P64241 [details] [associations]
symbol:glgC "Glucose-1-phosphate adenylyltransferase"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0009250 "glucan biosynthetic process"
evidence=IMP] InterPro:IPR005835 InterPro:IPR005836
InterPro:IPR011004 InterPro:IPR011831 InterPro:IPR023049
Pfam:PF00483 PROSITE:PS00808 PROSITE:PS00809 PROSITE:PS00810
UniPathway:UPA00164 UniPathway:UPA00934 HAMAP:MF_00624
GO:GO:0005829 GO:GO:0005524 EMBL:BX842575 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0005978
GO:GO:0045227 SUPFAM:SSF51161 GO:GO:0009250 eggNOG:COG0448
KO:K00975 OMA:PAKFVHE ProtClustDB:PRK00844 GO:GO:0008878
TIGRFAMs:TIGR02091 HOGENOM:HOG000278607 PIR:C70610
RefSeq:NP_215729.1 RefSeq:NP_335694.1 RefSeq:YP_006514588.1
ProteinModelPortal:P64241 SMR:P64241 PRIDE:P64241
EnsemblBacteria:EBMYCT00000001865 EnsemblBacteria:EBMYCT00000072594
GeneID:13319792 GeneID:887933 GeneID:924802 KEGG:mtc:MT1251
KEGG:mtu:Rv1213 KEGG:mtv:RVBD_1213 PATRIC:18124518
TubercuList:Rv1213 Uniprot:P64241
Length = 404
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 75/202 (37%), Positives = 124/202 (61%)
Query: 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSF 151
+V I+L GG G RL+PLT RAKPAVP GG YRLID +SN +N+ + +I ++TQ+ S
Sbjct: 6 HVLGIVLAGGEGKRLYPLTADRAKPAVPFGGAYRLIDFVLSNLVNARYLRICVLTQYKSH 65
Query: 152 SLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNK 211
SL+RH+++++ L +G+ G+ ++ + A Q G +W+ G+ADA+ Q + + D +
Sbjct: 66 SLDRHISQNWRL-SGLA-GE-YITPVPAQQ---RLGPRWYTGSADAIYQSLNLIYD---E 116
Query: 212 NVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQ 271
+ + +++ DH+YRMD + ++ HID+ A TV+ + + A+ +G + D SG+I
Sbjct: 117 DPDYIVVFGADHVYRMDPEQMVRFHIDSGAGATVAGIRVPRENATAFGCIDADDSGRIRS 176
Query: 272 FAEKPKGPDLKGMQCDTTLLGL 293
F EKP P DTT + +
Sbjct: 177 FVEKPLEPPGTPDDPDTTFVSM 198
Score = 151 (58.2 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 42/136 (30%), Positives = 69/136 (50%)
Query: 210 NKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQI 269
+++ + +++ DH+YRMD + ++ HID+ A TV+ + + A+ +G + D SG+I
Sbjct: 115 DEDPDYIVVFGADHVYRMDPEQMVRFHIDSGAGATVAGIRVPRENATAFGCIDADDSGRI 174
Query: 270 IQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP--- 326
F EKP P G D PD SMG Y+F T VL++ +R+
Sbjct: 175 RSFVEKPLEPP--GTPDD--------PDTT----FVSMGNYIFTTKVLIDAIRADADDDH 220
Query: 327 LSNDFGSEIIPASVKD 342
+D G +I+P V D
Sbjct: 221 SDHDMGGDIVPRLVAD 236
>TIGR_CMR|BA_5121 [details] [associations]
symbol:BA_5121 "glycogen biosynthesis protein GlgD"
species:198094 "Bacillus anthracis str. Ames" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0005978 "glycogen
biosynthetic process" evidence=ISS] InterPro:IPR005835
InterPro:IPR011004 InterPro:IPR011832 Pfam:PF00483 Pfam:PF00132
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0005978
InterPro:IPR001451 SUPFAM:SSF51161 GO:GO:0016779 KO:K00975
OMA:KVGVLTQ RefSeq:NP_847307.1 RefSeq:YP_021774.1
RefSeq:YP_031003.1 ProteinModelPortal:Q81K84 DNASU:1084434
EnsemblBacteria:EBBACT00000013358 EnsemblBacteria:EBBACT00000015704
EnsemblBacteria:EBBACT00000022761 GeneID:1084434 GeneID:2819782
GeneID:2849400 KEGG:ban:BA_5121 KEGG:bar:GBAA_5121 KEGG:bat:BAS4759
HOGENOM:HOG000278605 ProtClustDB:CLSK887772
BioCyc:BANT260799:GJAJ-4813-MONOMER
BioCyc:BANT261594:GJ7F-4973-MONOMER PANTHER:PTHR22572:SF9
Uniprot:Q81K84
Length = 344
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNS 150
+ + II G+ L +T R+ A+P GG YRLID +SN +NS + + + T +
Sbjct: 3 EKMLGIINATGSFPSLKKVTGHRSLAALPFGGRYRLIDFMLSNMVNSNIHSVAVFTSHKN 62
Query: 151 FSLNRHLARSYNLGNGVNFG-DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAK 209
SL H+ G+G + D + L + + F G+ R+ I F ++
Sbjct: 63 RSLMDHV------GSGKQWDLDRKRDGLFLFPPNCQCDQDEF-GSFAHFRRHIDYFLRSR 115
Query: 210 NKNVENVLILSGDHLYR-MDYTEFLQKHIDTKADITVSC 247
E ++++ HL +++ L++HI T ADIT C
Sbjct: 116 ----EEYVVITNSHLVTALNFQAVLERHIHTAADITEVC 150
>UNIPROTKB|Q7D5T3 [details] [associations]
symbol:mpg1 "Mannose-1-phosphate guanyltransferase"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0008928 "mannose-1-phosphate
guanylyltransferase (GDP) activity" evidence=IDA] [GO:0019307
"mannose biosynthetic process" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] [GO:0046710 "GDP metabolic process" evidence=IDA]
InterPro:IPR005835 Pfam:PF00483 Pfam:PF00132 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR InterPro:IPR001451 GO:GO:0008928
HOGENOM:HOG000283479 KO:K00966 GO:GO:0004475 GO:GO:0046710
GO:GO:0019307 OMA:GARVFGH EMBL:AL123456 PIR:A70978
RefSeq:NP_337891.1 RefSeq:YP_006516741.1 RefSeq:YP_177951.1
SMR:Q7D5T3 EnsemblBacteria:EBMYCT00000000574
EnsemblBacteria:EBMYCT00000071485 GeneID:13318087 GeneID:888715
GeneID:923152 KEGG:mtc:MT3364 KEGG:mtu:Rv3264c KEGG:mtv:RVBD_3264c
PATRIC:18129150 TubercuList:Rv3264c ProtClustDB:CLSK881162
Uniprot:Q7D5T3
Length = 359
Score = 92 (37.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 209 KNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQ 268
K +N + ++ +GD L D + L H +AD+T+ V + D RA +G + D +
Sbjct: 100 KLRN-DTAMVFNGDVLSGADLAQLLDFHRSNRADVTLQLVRVGDPRA--FGCVPTDEEDR 156
Query: 269 IIQFAEKPKGP 279
++ F EK + P
Sbjct: 157 VVAFLEKTEDP 167
Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 93 VAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQF 148
V A++L GG GTRL PLT KP +P G L + +S +G + + T +
Sbjct: 6 VDAVVLVGGKGTRLRPLTLSAPKPMLPTAGLPFLTHL-LSRIAAAGIEHVILGTSY 60
>TIGR_CMR|DET_1208 [details] [associations]
symbol:DET_1208 "nucleotidyltransferase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=ISS] InterPro:IPR005835
Pfam:PF00483 Pfam:PF00132 GO:GO:0009058 EMBL:CP000027
GenomeReviews:CP000027_GR InterPro:IPR001451 GO:GO:0016779
eggNOG:COG1208 HOGENOM:HOG000283479 KO:K00966 RefSeq:YP_181921.1
ProteinModelPortal:Q3Z778 STRING:Q3Z778 GeneID:3229491
KEGG:det:DET1208 PATRIC:21609451 OMA:TESVIWQ
ProtClustDB:CLSK2767641 BioCyc:DETH243164:GJNF-1209-MONOMER
Uniprot:Q3Z778
Length = 361
Score = 100 (40.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 214 ENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFA 273
+ + L+GD +D + L+ H D KA ++++ P+DD + YGL++ G++ +F
Sbjct: 98 DTFITLNGDIFTHLDLSAMLRAHRDKKALVSIALTPVDD--PTKYGLVETADGGRVSRFL 155
Query: 274 EKP 276
EKP
Sbjct: 156 EKP 158
Score = 67 (28.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 29/82 (35%), Positives = 36/82 (43%)
Query: 95 AIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLN 154
AIIL GG GTRL PL+ K VP+ N + + + G I I+TQ
Sbjct: 3 AIILVGGQGTRLRPLSINTPKSMVPVL-NVPFLSHVLRYLSSCGIKDI-ILTQ------- 53
Query: 155 RHLARSYN--LGNGVNFGDGFV 174
HLA GNG + G V
Sbjct: 54 GHLAAPIEQYFGNGQSLGVNLV 75
>TIGR_CMR|CHY_0976 [details] [associations]
symbol:CHY_0976 "glucose-1-phosphate
thymidylyltransferase" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0000271 "polysaccharide biosynthetic
process" evidence=ISS] [GO:0008879 "glucose-1-phosphate
thymidylyltransferase activity" evidence=ISS] InterPro:IPR005835
Pfam:PF00483 GO:GO:0009058 EMBL:CP000141 GenomeReviews:CP000141_GR
KO:K00973 GO:GO:0008879 eggNOG:COG1209 RefSeq:YP_359823.1
ProteinModelPortal:Q3ADG1 STRING:Q3ADG1 GeneID:3727376
KEGG:chy:CHY_0976 PATRIC:21275085 HOGENOM:HOG000283475 OMA:TDMLEVN
ProtClustDB:CLSK941261 BioCyc:CHYD246194:GJCN-975-MONOMER
InterPro:IPR005908 TIGRFAMs:TIGR01208 Uniprot:Q3ADG1
Length = 354
Score = 89 (36.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 95 AIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIM 145
A+IL GG GTRL PLT AK VP+ N ++ + + IN+G I ++
Sbjct: 3 ALILSGGQGTRLRPLTYSIAKQLVPVA-NKPILHFVIEDIINAGITDIGVI 52
Score = 73 (30.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/66 (22%), Positives = 36/66 (54%)
Query: 214 ENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFA 273
++ ++ GD+L EF++++ + + D T+ + D + +G+ +D + ++ +
Sbjct: 99 DDFIMYLGDNLINSGIKEFVEEYKENRYDATILLKEVQD--PTRFGVAVVDENFKVQRLI 156
Query: 274 EKPKGP 279
EKPK P
Sbjct: 157 EKPKEP 162
>UNIPROTKB|P55253 [details] [associations]
symbol:rmlA "Glucose-1-phosphate thymidylyltransferase"
species:562 "Escherichia coli" [GO:0000287 "magnesium ion binding"
evidence=ISS] [GO:0008879 "glucose-1-phosphate
thymidylyltransferase activity" evidence=IDA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IDA]
InterPro:IPR005835 InterPro:IPR005907 Pfam:PF00483
UniPathway:UPA00124 UniPathway:UPA00281 GO:GO:0000287 EMBL:AF125322
GO:GO:0045226 GO:GO:0009243 GO:GO:0008879 GO:GO:0019305
PANTHER:PTHR22572:SF13 TIGRFAMs:TIGR01207 eggNOG:COG1209 PIR:S78544
ProteinModelPortal:P55253 SMR:P55253 Uniprot:P55253
Length = 293
Score = 85 (35.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMT 146
K IIL GG+GTRL+P+T +K +PI +I P+S + +G I I++
Sbjct: 2 KTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDK-PMIYYPLSTLMLAGIRDILIIS 56
Score = 72 (30.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 21/88 (23%), Positives = 41/88 (46%)
Query: 192 QGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMD 251
Q + D + Q + ED + + L+L + Y D + ++ ++ ++ TV ++
Sbjct: 83 QPSPDGLAQAFIIGEDFIGGD-DCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVN 141
Query: 252 DCRASDYGLMKIDRSGQIIQFAEKPKGP 279
D YG+++ D +G I EKP P
Sbjct: 142 D--PERYGVVEFDNNGTAISLEEKPLEP 167
>UNIPROTKB|A0QPF9 [details] [associations]
symbol:rmlA "Glucose-1-phosphate thymidylyltransferase"
species:246196 "Mycobacterium smegmatis str. MC2 155" [GO:0000287
"magnesium ion binding" evidence=ISS] [GO:0008879
"glucose-1-phosphate thymidylyltransferase activity" evidence=IDA]
[GO:0019300 "rhamnose biosynthetic process" evidence=IDA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] InterPro:IPR005835 InterPro:IPR005907 Pfam:PF00483
UniPathway:UPA00124 GO:GO:0000287 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 HOGENOM:HOG000283473
KO:K00973 GO:GO:0008879 GO:GO:0019305 PANTHER:PTHR22572:SF13
TIGRFAMs:TIGR01207 eggNOG:COG1209 EMBL:AY439015
RefSeq:YP_006565153.1 RefSeq:YP_884797.1 ProteinModelPortal:A0QPF9
SMR:A0QPF9 STRING:A0QPF9 EnsemblBacteria:EBMYCT00000040999
GeneID:13426899 GeneID:4531375 KEGG:msg:MSMEI_0377
KEGG:msm:MSMEG_0384 PATRIC:18073238 OMA:RFENIDG
ProtClustDB:CLSK2517373 BioCyc:MSME246196:GJ4Y-384-MONOMER
GO:GO:0019300 Uniprot:A0QPF9
Length = 288
Score = 95 (38.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 35/103 (33%), Positives = 49/103 (47%)
Query: 96 IILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNR 155
IIL GG+GTRL PLT +K +P+ L+ P+S I +G I ++T R
Sbjct: 4 IILAGGSGTRLHPLTIGVSKQLLPVYDK-PLVYYPLSTLIMAGIRDILVITTPADAPAFR 62
Query: 156 HLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAV 198
L LG+G +FG V + A Q E + F AD +
Sbjct: 63 RL-----LGDGSDFG---VNLSYAAQNEPEGLAQAFLIGADHI 97
Score = 60 (26.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 25/103 (24%), Positives = 49/103 (47%)
Query: 256 SDYGLMKIDRSGQIIQFAEKPKGPD----LKGMQC-DTTLLGL--SMPDAVKFPY-IASM 307
S YG+++ D G+ + EKPK P + G+ D T++ + S+ + + Y I +
Sbjct: 140 SAYGVVEFDADGKAVSLEEKPKTPKSHYAVPGLYFYDNTVIDIARSLKKSARGEYEITEV 199
Query: 308 G-VYLFRTDVLLNLL-RSSYPLSNDFGSEIIPASVKDHNVQVR 348
+YL R + + +L R + L ++ AS +++R
Sbjct: 200 NQIYLNRGQLSVEVLARGTAWLDTGTFDSLLDASDFVRTIELR 242
>UNIPROTKB|P37744 [details] [associations]
symbol:rfbA "dTDP-glucose pyrophosphorylase" species:83333
"Escherichia coli K-12" [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0009058 "biosynthetic
process" evidence=IEA] [GO:0019305 "dTDP-rhamnose biosynthetic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=IEA] [GO:0008879
"glucose-1-phosphate thymidylyltransferase activity" evidence=IEA]
[GO:0009243 "O antigen biosynthetic process" evidence=IEA]
InterPro:IPR005835 InterPro:IPR005907 Pfam:PF00483
UniPathway:UPA00124 UniPathway:UPA00281 GO:GO:0005829 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0046872 EMBL:U03041 EMBL:U09876 GO:GO:0045226 GO:GO:0009243
PIR:F64969 RefSeq:NP_416543.1 RefSeq:YP_490281.1 PDB:1H5R PDB:1H5S
PDB:1H5T PDBsum:1H5R PDBsum:1H5S PDBsum:1H5T
ProteinModelPortal:P37744 SMR:P37744 IntAct:P37744
SWISS-2DPAGE:P37744 PRIDE:P37744 EnsemblBacteria:EBESCT00000001700
EnsemblBacteria:EBESCT00000018315 GeneID:12930686 GeneID:945154
KEGG:ecj:Y75_p2002 KEGG:eco:b2039 PATRIC:32119411 EchoBASE:EB1921
EcoGene:EG11978 HOGENOM:HOG000283473 KO:K00973 OMA:MEMKTRK
ProtClustDB:PRK15480 BioCyc:EcoCyc:DTDPGLUCOSEPP-MONOMER
BioCyc:ECOL316407:JW2024-MONOMER
BioCyc:MetaCyc:DTDPGLUCOSEPP-MONOMER EvolutionaryTrace:P37744
Genevestigator:P37744 GO:GO:0008879 GO:GO:0019305
PANTHER:PTHR22572:SF13 TIGRFAMs:TIGR01207 Uniprot:P37744
Length = 293
Score = 84 (34.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 96 IILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMT 146
IIL GG+GTRL+P+T +K +PI +I P+S + +G I I++
Sbjct: 7 IILAGGSGTRLYPVTMAVSKQLLPIYDK-PMIYYPLSTLMLAGIRDILIIS 56
Score = 70 (29.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 217 LILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKP 276
L+L + Y D + ++ ++ ++ TV ++D YG+++ D++G I EKP
Sbjct: 107 LVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVND--PERYGVVEFDKNGTAISLEEKP 164
Query: 277 KGP 279
P
Sbjct: 165 LEP 167
>UNIPROTKB|P26393 [details] [associations]
symbol:rmlA "Glucose-1-phosphate thymidylyltransferase"
species:99287 "Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0008879 "glucose-1-phosphate
thymidylyltransferase activity" evidence=IDA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IDA]
InterPro:IPR005835 InterPro:IPR005907 Pfam:PF00483
UniPathway:UPA00124 UniPathway:UPA00281 GO:GO:0000287 EMBL:AE006468
EMBL:X56793 GenomeReviews:AE006468_GR GO:GO:0045226 GO:GO:0009243
HOGENOM:HOG000283473 KO:K00973 OMA:MEMKTRK ProtClustDB:PRK15480
GO:GO:0008879 GO:GO:0019305 PANTHER:PTHR22572:SF13
TIGRFAMs:TIGR01207 eggNOG:COG1209 PIR:S15301 RefSeq:NP_461040.1
PDB:1IIM PDB:1IIN PDB:1MP3 PDB:1MP4 PDB:1MP5 PDB:3PKP PDB:3PKQ
PDBsum:1IIM PDBsum:1IIN PDBsum:1MP3 PDBsum:1MP4 PDBsum:1MP5
PDBsum:3PKP PDBsum:3PKQ ProteinModelPortal:P26393 SMR:P26393
PRIDE:P26393 GeneID:1253616 KEGG:stm:STM2095 PATRIC:32382773
SABIO-RK:P26393 EvolutionaryTrace:P26393 Uniprot:P26393
Length = 292
Score = 85 (35.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMT 146
K IIL GG+GTRL+P+T +K +PI +I P+S + +G I I++
Sbjct: 2 KTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDK-PMIYYPLSTLMLAGIRDILIIS 56
Score = 68 (29.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 19/88 (21%), Positives = 41/88 (46%)
Query: 192 QGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMD 251
Q + D + Q + E+ + + L+L + Y D + ++ ++ ++ TV ++
Sbjct: 83 QPSPDGLAQAFIIGEEFIGHD-DCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVN 141
Query: 252 DCRASDYGLMKIDRSGQIIQFAEKPKGP 279
D YG+++ D+ G + EKP P
Sbjct: 142 D--PERYGVVEFDQKGTAVSLEEKPLQP 167
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 348 348 0.00099 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 612 (65 KB)
Total size of DFA: 240 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.21u 0.10s 26.31t Elapsed: 00:00:01
Total cpu time: 26.21u 0.10s 26.31t Elapsed: 00:00:01
Start: Fri May 10 12:09:41 2013 End: Fri May 10 12:09:42 2013