Query 018940
Match_columns 348
No_of_seqs 148 out of 2142
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 05:21:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018940.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018940hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2211 MelB Na+/melibiose sym 100.0 2.4E-39 5.2E-44 307.4 30.3 317 14-342 2-327 (467)
2 PRK11462 putative transporter; 100.0 7.1E-34 1.5E-38 277.1 33.2 303 19-339 4-315 (460)
3 PRK10429 melibiose:sodium symp 100.0 5.1E-33 1.1E-37 272.3 30.5 304 20-336 2-315 (473)
4 PRK09669 putative symporter Ya 100.0 7.7E-33 1.7E-37 268.9 30.1 309 19-341 4-318 (444)
5 PF13347 MFS_2: MFS/sugar tran 100.0 3.3E-34 7.1E-39 277.3 19.3 305 25-340 2-313 (428)
6 TIGR00792 gph sugar (Glycoside 100.0 2.9E-31 6.2E-36 256.7 29.1 300 26-338 1-308 (437)
7 PRK09848 glucuronide transport 100.0 6.7E-30 1.5E-34 248.6 30.2 308 19-339 3-316 (448)
8 TIGR00710 efflux_Bcr_CflA drug 99.9 1.4E-22 3E-27 192.2 30.7 273 37-336 18-291 (385)
9 TIGR00900 2A0121 H+ Antiporter 99.9 4.1E-22 9E-27 187.0 32.7 286 31-338 6-298 (365)
10 TIGR00901 2A0125 AmpG-related 99.9 4.5E-22 9.7E-27 187.5 31.1 278 42-337 6-295 (356)
11 PRK03545 putative arabinose tr 99.9 8.4E-22 1.8E-26 188.2 33.0 274 25-331 10-284 (390)
12 COG2814 AraJ Arabinose efflux 99.9 9.1E-22 2E-26 184.0 31.8 294 17-341 6-300 (394)
13 TIGR00886 2A0108 nitrite extru 99.9 2.5E-22 5.5E-27 189.4 28.5 291 30-337 7-311 (366)
14 PRK10133 L-fucose transporter; 99.9 3.4E-21 7.5E-26 186.9 35.6 323 2-338 4-346 (438)
15 PRK11902 ampG muropeptide tran 99.9 1.5E-21 3.3E-26 187.2 32.8 272 37-333 12-292 (402)
16 TIGR01301 GPH_sucrose GPH fami 99.9 1.8E-21 3.9E-26 188.6 32.5 314 22-338 2-357 (477)
17 PRK10473 multidrug efflux syst 99.9 2.7E-21 5.8E-26 184.7 32.8 268 42-337 21-289 (392)
18 TIGR00899 2A0120 sugar efflux 99.9 1.2E-21 2.6E-26 185.2 29.8 272 33-333 6-281 (375)
19 PLN00028 nitrate transmembrane 99.9 5E-21 1.1E-25 187.7 34.7 257 42-315 54-318 (476)
20 TIGR00903 2A0129 major facilit 99.9 3E-21 6.5E-26 183.1 32.0 249 36-315 3-253 (368)
21 PRK10213 nepI ribonucleoside t 99.9 5E-21 1.1E-25 183.3 33.7 259 25-313 21-280 (394)
22 PRK11102 bicyclomycin/multidru 99.9 1.8E-21 3.9E-26 184.6 30.2 264 40-330 7-273 (377)
23 TIGR00890 2A0111 Oxalate/Forma 99.9 1.6E-21 3.6E-26 183.5 29.2 268 42-338 21-291 (377)
24 PRK10406 alpha-ketoglutarate t 99.9 7.1E-21 1.5E-25 184.4 34.2 280 31-326 29-318 (432)
25 PRK14995 methyl viologen resis 99.9 4E-21 8.6E-26 189.4 32.7 287 26-338 8-346 (495)
26 TIGR00891 2A0112 putative sial 99.9 7.8E-21 1.7E-25 181.1 32.1 281 21-327 9-314 (405)
27 PRK10091 MFS transport protein 99.9 4.2E-21 9.2E-26 182.9 30.1 280 26-337 5-285 (382)
28 PRK11010 ampG muropeptide tran 99.9 8E-21 1.7E-25 186.9 32.7 280 26-331 14-303 (491)
29 TIGR00897 2A0118 polyol permea 99.9 6.3E-21 1.4E-25 183.0 31.1 273 20-315 8-287 (402)
30 PRK15402 multidrug efflux syst 99.9 6.4E-21 1.4E-25 183.0 30.1 284 27-337 16-301 (406)
31 PRK11663 regulatory protein Uh 99.9 6.7E-21 1.4E-25 184.7 29.6 248 41-313 40-307 (434)
32 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.5E-20 3.2E-25 181.2 31.6 259 37-315 20-309 (412)
33 PRK09556 uhpT sugar phosphate 99.9 5.3E-22 1.2E-26 194.2 21.8 263 45-326 50-333 (467)
34 PRK09874 drug efflux system pr 99.9 1.9E-20 4.1E-25 179.3 31.3 294 15-337 4-308 (408)
35 TIGR00893 2A0114 d-galactonate 99.9 7.2E-21 1.6E-25 179.8 27.6 246 45-315 15-281 (399)
36 PF11700 ATG22: Vacuole efflux 99.9 5.7E-20 1.2E-24 179.0 34.3 301 23-336 3-368 (477)
37 PRK11551 putative 3-hydroxyphe 99.9 4.3E-20 9.4E-25 177.0 33.1 277 32-336 23-304 (406)
38 PRK15034 nitrate/nitrite trans 99.9 5.7E-20 1.2E-24 177.2 33.8 306 7-333 14-332 (462)
39 PF07690 MFS_1: Major Facilita 99.9 3.7E-21 8E-26 179.8 24.8 278 33-337 5-293 (352)
40 TIGR00885 fucP L-fucose:H+ sym 99.9 4.6E-20 9.9E-25 177.6 32.8 289 36-339 15-321 (410)
41 PRK10504 putative transporter; 99.9 3.2E-20 7E-25 181.5 31.7 287 25-339 11-349 (471)
42 TIGR00711 efflux_EmrB drug res 99.9 9.2E-21 2E-25 185.7 27.7 280 29-335 7-339 (485)
43 COG2271 UhpC Sugar phosphate p 99.9 9.4E-22 2E-26 182.3 19.2 271 46-340 50-344 (448)
44 PRK11273 glpT sn-glycerol-3-ph 99.9 3.2E-20 6.9E-25 180.9 30.4 247 47-314 51-318 (452)
45 PRK11646 multidrug resistance 99.9 1.3E-19 2.7E-24 174.0 33.8 274 31-336 17-293 (400)
46 PRK12307 putative sialic acid 99.9 4.7E-20 1E-24 177.8 30.6 282 27-338 21-317 (426)
47 PRK09705 cynX putative cyanate 99.9 5.5E-20 1.2E-24 176.0 30.4 266 42-340 27-293 (393)
48 TIGR00902 2A0127 phenyl propri 99.9 8.2E-20 1.8E-24 174.1 30.7 277 31-336 11-289 (382)
49 PRK15403 multidrug efflux syst 99.9 2E-19 4.3E-24 173.4 32.0 259 31-314 23-283 (413)
50 PRK10054 putative transporter; 99.9 4.2E-20 9.2E-25 177.0 26.9 281 26-336 9-293 (395)
51 PRK11128 putative 3-phenylprop 99.9 1.2E-19 2.7E-24 172.8 29.8 274 34-336 14-289 (382)
52 PRK10642 proline/glycine betai 99.9 3.4E-19 7.5E-24 175.4 33.5 281 31-328 23-327 (490)
53 PRK10489 enterobactin exporter 99.9 6.3E-20 1.4E-24 176.8 27.2 285 28-336 21-308 (417)
54 PRK11652 emrD multidrug resist 99.9 3.6E-19 7.9E-24 170.1 31.7 252 37-315 21-273 (394)
55 PRK03699 putative transporter; 99.9 3.3E-19 7.1E-24 170.6 31.2 265 40-334 23-288 (394)
56 TIGR00882 2A0105 oligosacchari 99.9 1.8E-19 4E-24 172.4 28.8 286 29-336 7-303 (396)
57 PRK15011 sugar efflux transpor 99.9 6.1E-19 1.3E-23 168.7 32.2 275 27-332 18-297 (393)
58 TIGR00881 2A0104 phosphoglycer 99.9 5.4E-20 1.2E-24 173.3 24.4 250 42-315 13-282 (379)
59 TIGR00712 glpT glycerol-3-phos 99.9 1.8E-19 3.8E-24 175.0 27.7 250 46-315 48-317 (438)
60 TIGR00896 CynX cyanate transpo 99.9 2.9E-19 6.4E-24 168.4 28.5 265 44-339 20-285 (355)
61 PRK09952 shikimate transporter 99.9 8.5E-19 1.9E-23 170.2 32.3 304 14-331 10-330 (438)
62 PRK03633 putative MFS family t 99.9 4.7E-19 1E-23 168.8 29.3 275 25-334 7-282 (381)
63 PRK11043 putative transporter; 99.9 2E-18 4.3E-23 165.4 33.5 262 38-331 20-282 (401)
64 PRK15075 citrate-proton sympor 99.9 1.6E-18 3.4E-23 168.1 32.4 284 27-326 18-313 (434)
65 PRK11195 lysophospholipid tran 99.9 2.1E-18 4.5E-23 165.2 32.7 267 27-325 6-279 (393)
66 PRK12382 putative transporter; 99.9 2.2E-18 4.9E-23 164.5 32.7 281 25-337 16-299 (392)
67 TIGR00895 2A0115 benzoate tran 99.9 3.3E-19 7.2E-24 169.2 26.1 262 40-329 33-327 (398)
68 PRK09528 lacY galactoside perm 99.9 3.1E-19 6.6E-24 172.2 26.1 282 32-337 18-312 (420)
69 PRK05122 major facilitator sup 99.9 3E-18 6.4E-23 164.0 32.4 283 24-337 15-299 (399)
70 TIGR02718 sider_RhtX_FptX side 99.9 5.8E-18 1.2E-22 161.7 34.2 271 34-329 11-286 (390)
71 COG2223 NarK Nitrate/nitrite t 99.8 7.8E-19 1.7E-23 163.0 26.6 262 52-338 42-305 (417)
72 TIGR00883 2A0106 metabolite-pr 99.8 1.5E-18 3.3E-23 164.3 28.9 257 56-325 27-293 (394)
73 cd06174 MFS The Major Facilita 99.8 5.1E-18 1.1E-22 157.9 29.3 256 31-338 6-263 (352)
74 PRK03893 putative sialic acid 99.8 6E-18 1.3E-22 166.5 31.2 280 25-332 21-356 (496)
75 COG2270 Permeases of the major 99.8 1.4E-19 3.1E-24 168.0 16.9 315 13-341 3-342 (438)
76 TIGR00894 2A0114euk Na(+)-depe 99.8 1.6E-18 3.5E-23 169.4 24.3 240 53-315 70-327 (465)
77 PRK10077 xylE D-xylose transpo 99.8 2.7E-17 5.8E-22 161.1 30.3 304 24-337 12-356 (479)
78 TIGR01299 synapt_SV2 synaptic 99.8 6.6E-17 1.4E-21 164.5 31.4 170 43-228 186-358 (742)
79 TIGR00879 SP MFS transporter, 99.8 2.4E-17 5.3E-22 159.9 26.9 257 56-335 68-367 (481)
80 PRK08633 2-acyl-glycerophospho 99.8 3.4E-17 7.3E-22 176.6 30.1 297 25-336 10-318 (1146)
81 KOG2532 Permease of the major 99.8 1.7E-17 3.7E-22 160.9 24.7 265 55-341 69-357 (466)
82 TIGR00805 oat sodium-independe 99.8 5.3E-18 1.2E-22 171.2 21.2 287 42-333 51-415 (633)
83 TIGR00892 2A0113 monocarboxyla 99.8 5.5E-17 1.2E-21 158.3 27.6 244 43-312 38-303 (455)
84 PF05977 MFS_3: Transmembrane 99.8 3.4E-16 7.5E-21 154.1 31.0 297 19-338 5-305 (524)
85 TIGR00887 2A0109 phosphate:H+ 99.8 5.4E-16 1.2E-20 153.2 31.7 267 55-334 52-382 (502)
86 TIGR00889 2A0110 nucleoside tr 99.8 3.7E-16 8.1E-21 150.8 29.3 266 36-337 14-301 (418)
87 PRK06814 acylglycerophosphoeth 99.8 1.7E-16 3.6E-21 171.2 28.5 247 58-331 51-305 (1140)
88 PF03825 Nuc_H_symport: Nucleo 99.8 1.3E-15 2.9E-20 145.6 28.7 279 34-337 12-293 (400)
89 PRK10207 dipeptide/tripeptide 99.8 2.5E-15 5.3E-20 147.8 30.7 172 30-225 20-194 (489)
90 KOG4830 Predicted sugar transp 99.7 5.4E-20 1.2E-24 159.3 -2.7 280 15-346 8-297 (412)
91 TIGR00898 2A0119 cation transp 99.7 6.9E-16 1.5E-20 152.3 25.2 257 49-340 114-408 (505)
92 TIGR00924 yjdL_sub1_fam amino 99.7 1E-14 2.2E-19 143.1 31.6 165 27-215 13-183 (475)
93 PF01306 LacY_symp: LacY proto 99.7 1.7E-15 3.6E-20 143.4 23.6 287 25-335 8-307 (412)
94 KOG1330 Sugar transporter/spin 99.7 6.1E-17 1.3E-21 151.8 10.7 271 20-314 29-312 (493)
95 COG0738 FucP Fucose permease [ 99.7 1.1E-13 2.3E-18 128.3 31.7 276 45-335 33-320 (422)
96 KOG2533 Permease of the major 99.7 3.9E-15 8.6E-20 144.9 22.5 264 53-337 75-364 (495)
97 COG2807 CynX Cyanate permease 99.7 6.9E-14 1.5E-18 127.8 28.1 271 41-343 29-300 (395)
98 PF03209 PUCC: PUCC protein; 99.7 2.7E-14 5.8E-19 133.3 24.7 276 52-339 8-297 (403)
99 KOG3764 Vesicular amine transp 99.6 8.6E-16 1.9E-20 141.4 11.4 250 55-331 102-352 (464)
100 KOG0569 Permease of the major 99.6 6.6E-14 1.4E-18 135.0 24.8 256 56-335 53-353 (485)
101 PRK09584 tppB putative tripept 99.6 9.3E-13 2E-17 130.0 31.8 159 31-212 28-189 (500)
102 KOG2504 Monocarboxylate transp 99.6 1E-13 2.2E-18 136.1 24.2 279 27-331 49-379 (509)
103 TIGR00788 fbt folate/biopterin 99.6 2.9E-13 6.3E-18 132.5 24.3 272 34-335 36-336 (468)
104 PRK15462 dipeptide/tripeptide 99.6 3.1E-12 6.6E-17 125.0 30.9 165 33-221 18-185 (493)
105 PF06609 TRI12: Fungal trichot 99.6 2E-12 4.3E-17 127.9 29.7 268 45-341 65-404 (599)
106 TIGR00806 rfc RFC reduced fola 99.6 4.9E-12 1.1E-16 121.1 28.8 148 22-185 23-172 (511)
107 KOG0254 Predicted transporter 99.5 6.4E-12 1.4E-16 124.5 25.1 250 59-337 89-379 (513)
108 TIGR01272 gluP glucose/galacto 99.4 5.2E-11 1.1E-15 110.4 23.6 202 133-337 17-228 (310)
109 PF03092 BT1: BT1 family; Int 99.4 2.4E-11 5.3E-16 117.7 21.7 267 45-333 10-301 (433)
110 PF05631 DUF791: Protein of un 99.4 4.1E-10 8.9E-15 103.9 26.5 251 37-309 47-301 (354)
111 KOG0637 Sucrose transporter an 99.4 7.3E-12 1.6E-16 117.6 14.5 157 24-182 32-198 (498)
112 PTZ00207 hypothetical protein; 99.3 1.8E-09 3.9E-14 107.5 29.1 166 42-229 45-210 (591)
113 TIGR00889 2A0110 nucleoside tr 99.3 5E-10 1.1E-14 108.2 20.7 181 33-228 217-406 (418)
114 KOG0253 Synaptic vesicle trans 99.2 8.1E-09 1.8E-13 94.9 24.9 174 27-228 80-254 (528)
115 PRK09705 cynX putative cyanate 99.2 2.8E-09 6E-14 102.1 21.8 169 36-228 217-385 (393)
116 KOG0255 Synaptic vesicle trans 99.2 1.2E-08 2.7E-13 101.2 26.9 253 54-342 113-405 (521)
117 KOG2563 Permease of the major 99.2 1.5E-08 3.3E-13 95.5 24.9 288 26-331 47-346 (480)
118 PF00083 Sugar_tr: Sugar (and 99.2 1.5E-14 3.2E-19 140.7 -16.8 254 58-335 45-334 (451)
119 PRK09556 uhpT sugar phosphate 99.2 2.1E-09 4.5E-14 105.4 19.2 167 41-221 275-446 (467)
120 PRK10642 proline/glycine betai 99.2 7.4E-09 1.6E-13 102.1 23.0 171 37-229 263-434 (490)
121 TIGR00890 2A0111 Oxalate/Forma 99.2 1E-09 2.2E-14 103.1 15.9 155 39-216 220-374 (377)
122 KOG0252 Inorganic phosphate tr 99.1 1.6E-09 3.5E-14 102.1 15.8 270 56-337 81-398 (538)
123 TIGR00897 2A0118 polyol permea 99.1 6.1E-09 1.3E-13 100.0 20.5 167 34-221 232-398 (402)
124 PRK15011 sugar efflux transpor 99.1 1.4E-08 3E-13 97.2 22.0 161 39-226 231-392 (393)
125 KOG2615 Permease of the major 99.1 4.9E-09 1.1E-13 96.7 17.3 162 11-188 9-181 (451)
126 PRK11551 putative 3-hydroxyphe 99.1 8.5E-09 1.9E-13 98.8 19.8 134 39-187 235-368 (406)
127 KOG2325 Predicted transporter/ 99.1 6.8E-09 1.5E-13 100.0 18.7 245 30-288 40-300 (488)
128 PRK05122 major facilitator sup 99.1 1.3E-08 2.9E-13 97.2 20.6 162 38-226 230-391 (399)
129 TIGR00880 2_A_01_02 Multidrug 99.1 1.5E-09 3.2E-14 87.0 11.8 136 66-226 5-140 (141)
130 PRK11663 regulatory protein Uh 99.1 1.2E-08 2.6E-13 99.0 19.7 171 34-226 253-426 (434)
131 PF03137 OATP: Organic Anion T 99.1 1.2E-11 2.5E-16 122.6 -1.6 285 42-331 17-388 (539)
132 cd06174 MFS The Major Facilita 99.1 9E-09 1.9E-13 95.5 17.9 164 32-220 183-348 (352)
133 KOG3626 Organic anion transpor 99.1 6.3E-09 1.4E-13 104.2 17.5 291 42-337 111-484 (735)
134 PRK03545 putative arabinose tr 99.1 2.6E-08 5.6E-13 95.1 20.8 160 42-227 223-383 (390)
135 PRK10489 enterobactin exporter 99.1 2E-08 4.3E-13 96.8 20.2 162 42-228 241-403 (417)
136 TIGR00899 2A0120 sugar efflux 99.1 2E-08 4.2E-13 94.9 19.6 159 41-226 216-375 (375)
137 PRK10504 putative transporter; 99.1 3.3E-08 7.1E-13 96.8 21.8 144 35-190 272-416 (471)
138 PRK11273 glpT sn-glycerol-3-ph 99.1 1.9E-08 4E-13 98.2 19.9 171 31-223 260-434 (452)
139 TIGR00893 2A0114 d-galactonate 99.0 7E-09 1.5E-13 97.7 16.3 173 26-220 217-395 (399)
140 PRK12382 putative transporter; 99.0 2.1E-08 4.5E-13 95.8 19.4 159 38-223 230-388 (392)
141 PRK03699 putative transporter; 99.0 3.1E-08 6.7E-13 94.8 20.7 156 37-218 218-374 (394)
142 PRK09528 lacY galactoside perm 99.0 1.8E-08 3.9E-13 97.2 18.5 160 43-227 242-406 (420)
143 TIGR00883 2A0106 metabolite-pr 99.0 8.7E-09 1.9E-13 97.4 15.9 143 34-187 229-373 (394)
144 PRK03633 putative MFS family t 99.0 3.7E-08 8.1E-13 93.8 19.7 148 41-216 217-364 (381)
145 COG3104 PTR2 Dipeptide/tripept 99.0 2.3E-07 5E-12 88.9 24.4 172 30-224 27-205 (498)
146 COG2814 AraJ Arabinose efflux 99.0 5.9E-08 1.3E-12 91.5 20.2 164 34-223 221-385 (394)
147 PRK09874 drug efflux system pr 99.0 4.4E-08 9.6E-13 93.7 19.6 162 40-226 235-400 (408)
148 TIGR00879 SP MFS transporter, 99.0 1.1E-08 2.5E-13 99.0 15.2 168 44-228 304-474 (481)
149 PRK10077 xylE D-xylose transpo 99.0 1.2E-08 2.7E-13 99.9 15.2 167 45-228 292-461 (479)
150 TIGR00892 2A0113 monocarboxyla 98.9 1.1E-08 2.5E-13 99.8 13.8 162 33-217 250-414 (455)
151 PRK15075 citrate-proton sympor 98.9 1.6E-07 3.5E-12 91.1 19.6 137 40-187 254-392 (434)
152 PRK09952 shikimate transporter 98.9 3.2E-07 6.9E-12 89.2 21.5 170 37-226 263-434 (438)
153 PRK03893 putative sialic acid 98.9 7.3E-08 1.6E-12 94.9 17.0 132 43-187 294-426 (496)
154 TIGR00896 CynX cyanate transpo 98.9 1.8E-07 3.8E-12 88.1 18.5 137 38-188 211-347 (355)
155 PRK10091 MFS transport protein 98.9 1.3E-07 2.9E-12 90.1 17.5 158 42-223 217-375 (382)
156 PRK11010 ampG muropeptide tran 98.9 2.3E-06 5E-11 84.5 26.8 161 40-221 238-400 (491)
157 TIGR01299 synapt_SV2 synaptic 98.9 3E-07 6.5E-12 94.4 20.9 140 62-228 598-737 (742)
158 TIGR00711 efflux_EmrB drug res 98.9 1.5E-07 3.3E-12 92.1 18.0 140 37-187 268-408 (485)
159 PRK10406 alpha-ketoglutarate t 98.8 4.1E-07 8.9E-12 88.2 20.4 126 37-173 256-382 (432)
160 KOG2816 Predicted transporter 98.8 1.1E-07 2.5E-12 92.3 16.4 242 67-338 70-329 (463)
161 PRK15402 multidrug efflux syst 98.8 4.1E-07 8.8E-12 87.3 20.2 133 42-185 233-366 (406)
162 KOG4686 Predicted sugar transp 98.8 1.7E-07 3.6E-12 83.6 15.6 127 44-186 284-411 (459)
163 TIGR02718 sider_RhtX_FptX side 98.8 4.4E-07 9.6E-12 86.6 19.5 165 35-217 219-384 (390)
164 TIGR00792 gph sugar (Glycoside 98.8 1.6E-07 3.5E-12 90.8 16.6 144 33-190 231-381 (437)
165 COG2271 UhpC Sugar phosphate p 98.8 1.3E-07 2.9E-12 88.7 15.1 168 30-220 258-430 (448)
166 TIGR00902 2A0127 phenyl propri 98.8 7.1E-07 1.5E-11 85.1 20.3 146 27-188 208-354 (382)
167 TIGR00712 glpT glycerol-3-phos 98.8 3.4E-07 7.3E-12 89.0 17.9 168 38-227 265-436 (438)
168 TIGR00900 2A0121 H+ Antiporter 98.8 4.7E-07 1E-11 84.6 18.3 130 45-188 232-362 (365)
169 PRK12307 putative sialic acid 98.8 3.7E-07 7.9E-12 88.0 17.9 130 43-187 250-381 (426)
170 PRK14995 methyl viologen resis 98.8 3.3E-07 7.1E-12 90.6 17.8 134 42-187 277-411 (495)
171 PLN00028 nitrate transmembrane 98.8 2.9E-07 6.4E-12 90.5 17.1 157 42-225 270-433 (476)
172 PRK09848 glucuronide transport 98.7 1.1E-06 2.5E-11 85.5 20.0 150 29-190 233-389 (448)
173 COG2223 NarK Nitrate/nitrite t 98.7 4.7E-07 1E-11 85.0 16.1 165 42-224 236-401 (417)
174 PF12832 MFS_1_like: MFS_1 lik 98.7 5.6E-08 1.2E-12 70.5 7.8 58 38-95 14-71 (77)
175 TIGR00891 2A0112 putative sial 98.7 5.4E-07 1.2E-11 85.7 16.9 133 42-188 256-389 (405)
176 TIGR00894 2A0114euk Na(+)-depe 98.7 6.4E-07 1.4E-11 87.6 17.7 177 27-222 264-448 (465)
177 COG2807 CynX Cyanate permease 98.7 9.8E-07 2.1E-11 81.4 17.2 167 36-225 220-386 (395)
178 TIGR00895 2A0115 benzoate tran 98.7 6.3E-07 1.4E-11 84.8 16.6 132 37-183 263-394 (398)
179 TIGR02332 HpaX 4-hydroxyphenyl 98.7 4.1E-07 8.8E-12 87.7 15.0 158 31-211 249-408 (412)
180 PF03825 Nuc_H_symport: Nucleo 98.7 4.2E-06 9E-11 80.4 21.6 190 24-227 207-398 (400)
181 PRK11128 putative 3-phenylprop 98.7 3.1E-06 6.7E-11 80.6 20.5 139 33-187 214-353 (382)
182 PF11700 ATG22: Vacuole efflux 98.7 4.4E-06 9.5E-11 81.9 21.8 157 25-189 282-442 (477)
183 TIGR00926 2A1704 Peptide:H+ sy 98.7 4.1E-05 8.9E-10 77.8 28.6 171 44-223 7-181 (654)
184 PF13347 MFS_2: MFS/sugar tran 98.7 1.2E-06 2.6E-11 84.8 17.0 151 27-190 228-385 (428)
185 PRK08633 2-acyl-glycerophospho 98.7 1.7E-06 3.7E-11 93.9 19.9 130 39-183 247-378 (1146)
186 PRK15034 nitrate/nitrite trans 98.6 1.2E-06 2.6E-11 85.2 16.1 59 44-104 272-330 (462)
187 PRK11902 ampG muropeptide tran 98.6 8.8E-06 1.9E-10 78.1 21.4 155 45-220 230-386 (402)
188 PRK11195 lysophospholipid tran 98.6 4.3E-06 9.3E-11 80.1 18.8 125 45-185 226-352 (393)
189 TIGR00769 AAA ADP/ATP carrier 98.6 0.00039 8.5E-09 67.9 32.1 253 57-315 41-333 (472)
190 KOG0569 Permease of the major 98.6 4.2E-06 9E-11 81.4 18.1 169 42-229 288-459 (485)
191 PRK10213 nepI ribonucleoside t 98.6 1.1E-05 2.5E-10 77.2 21.0 153 42-220 234-387 (394)
192 TIGR00882 2A0105 oligosacchari 98.6 3.7E-06 7.9E-11 80.5 17.6 155 43-222 234-393 (396)
193 TIGR00881 2A0104 phosphoglycer 98.6 1.8E-06 3.9E-11 81.0 15.1 145 31-187 223-370 (379)
194 PRK10473 multidrug efflux syst 98.6 2.9E-06 6.2E-11 81.0 16.3 61 45-106 224-285 (392)
195 PRK11646 multidrug resistance 98.6 3.5E-06 7.5E-11 81.0 16.9 131 44-189 228-359 (400)
196 PRK11102 bicyclomycin/multidru 98.5 9.1E-06 2E-10 76.9 19.5 55 43-98 213-268 (377)
197 TIGR00903 2A0129 major facilit 98.5 8.9E-06 1.9E-10 77.3 19.1 142 28-187 196-340 (368)
198 PRK06814 acylglycerophosphoeth 98.5 5.1E-06 1.1E-10 90.3 19.4 153 29-187 230-394 (1140)
199 PF07690 MFS_1: Major Facilita 98.5 3.3E-06 7.1E-11 78.6 15.5 138 30-179 212-351 (352)
200 TIGR00710 efflux_Bcr_CflA drug 98.5 1.3E-05 2.8E-10 75.8 19.3 124 41-175 223-347 (385)
201 PRK10054 putative transporter; 98.5 9.2E-06 2E-10 77.9 17.9 174 28-226 210-386 (395)
202 TIGR00887 2A0109 phosphate:H+ 98.5 2.5E-06 5.3E-11 84.5 14.0 172 44-228 308-492 (502)
203 PF05977 MFS_3: Transmembrane 98.5 3.1E-05 6.8E-10 76.8 21.0 154 42-220 236-390 (524)
204 TIGR00901 2A0125 AmpG-related 98.4 7.6E-06 1.6E-10 76.9 15.2 129 36-172 221-354 (356)
205 PRK09669 putative symporter Ya 98.4 4.4E-05 9.5E-10 74.3 20.8 135 44-191 249-390 (444)
206 PRK10429 melibiose:sodium symp 98.4 3.6E-05 7.9E-10 75.6 20.2 151 31-190 238-394 (473)
207 KOG3574 Acetyl-CoA transporter 98.4 1.9E-05 4E-10 73.4 15.9 243 37-291 44-305 (510)
208 PRK10133 L-fucose transporter; 98.4 4.4E-05 9.5E-10 74.3 19.4 111 41-168 275-387 (438)
209 TIGR00898 2A0119 cation transp 98.4 4.5E-05 9.7E-10 75.4 19.7 147 53-228 352-498 (505)
210 TIGR01272 gluP glucose/galacto 98.4 4.8E-05 1E-09 70.5 18.5 123 40-180 156-281 (310)
211 PRK11043 putative transporter; 98.3 6E-05 1.3E-09 72.1 19.5 131 42-183 221-351 (401)
212 KOG2532 Permease of the major 98.3 1.7E-05 3.6E-10 77.5 15.7 179 26-224 260-447 (466)
213 TIGR00886 2A0108 nitrite extru 98.3 2.4E-06 5.1E-11 80.4 8.9 124 40-175 241-365 (366)
214 PF06813 Nodulin-like: Nodulin 98.3 7.6E-05 1.6E-09 66.7 17.2 129 42-180 20-148 (250)
215 COG2211 MelB Na+/melibiose sym 98.3 8.8E-05 1.9E-09 71.7 18.5 147 32-191 244-398 (467)
216 PRK11462 putative transporter; 98.2 0.00063 1.4E-08 66.7 23.3 136 41-189 245-387 (460)
217 PF01306 LacY_symp: LacY proto 98.2 0.00049 1.1E-08 65.8 21.1 170 35-229 231-405 (412)
218 PF01770 Folate_carrier: Reduc 98.1 0.0043 9.2E-08 59.3 26.0 127 45-187 24-153 (412)
219 COG2270 Permeases of the major 98.1 0.00026 5.6E-09 67.0 17.3 131 44-189 272-403 (438)
220 PRK11652 emrD multidrug resist 98.1 0.00046 9.9E-09 65.8 19.5 128 42-182 225-353 (394)
221 KOG4686 Predicted sugar transp 98.1 1E-05 2.2E-10 72.4 6.7 265 55-337 75-351 (459)
222 KOG3098 Uncharacterized conser 98.0 0.00087 1.9E-08 64.9 19.7 258 65-342 56-338 (461)
223 PF06963 FPN1: Ferroportin1 (F 98.0 0.019 4E-07 55.6 31.1 56 269-327 277-333 (432)
224 KOG2504 Monocarboxylate transp 97.9 0.0002 4.3E-09 70.9 13.7 173 26-220 300-472 (509)
225 KOG2533 Permease of the major 97.9 9.8E-05 2.1E-09 72.5 10.6 83 25-107 274-361 (495)
226 TIGR00924 yjdL_sub1_fam amino 97.9 0.0008 1.7E-08 66.2 17.2 164 44-224 292-468 (475)
227 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00038 8.2E-09 50.4 9.0 66 255-323 5-71 (77)
228 TIGR00788 fbt folate/biopterin 97.7 0.0008 1.7E-08 66.1 14.3 131 54-191 283-415 (468)
229 PRK15462 dipeptide/tripeptide 97.7 0.00026 5.5E-09 69.7 10.1 84 250-335 9-94 (493)
230 PRK09584 tppB putative tripept 97.6 0.0036 7.8E-08 62.1 17.7 157 61-225 318-480 (500)
231 PF03219 TLC: TLC ATP/ADP tran 97.6 0.088 1.9E-06 51.9 31.3 167 146-315 164-349 (491)
232 PRK10207 dipeptide/tripeptide 97.6 0.0005 1.1E-08 67.9 10.4 87 250-338 14-102 (489)
233 COG0477 ProP Permeases of the 97.5 0.018 3.8E-07 51.2 19.4 153 42-214 20-175 (338)
234 KOG3762 Predicted transporter 97.5 0.00016 3.5E-09 70.2 5.6 66 42-107 29-94 (618)
235 PRK15403 multidrug efflux syst 97.5 0.015 3.2E-07 56.1 19.3 51 41-91 235-286 (413)
236 TIGR00885 fucP L-fucose:H+ sym 97.4 0.023 5.1E-07 54.7 19.2 63 41-104 249-313 (410)
237 PF13000 Acatn: Acetyl-coenzym 97.3 0.036 7.8E-07 53.9 19.3 235 47-294 23-321 (544)
238 PF03209 PUCC: PUCC protein; 97.3 0.037 7.9E-07 52.6 18.8 170 37-217 221-391 (403)
239 KOG3764 Vesicular amine transp 97.3 0.0016 3.6E-08 61.2 9.2 157 45-223 291-453 (464)
240 KOG0254 Predicted transporter 97.2 0.0024 5.1E-08 63.5 10.8 169 41-228 312-487 (513)
241 TIGR01301 GPH_sucrose GPH fami 97.2 0.044 9.6E-07 53.9 19.0 153 65-228 311-475 (477)
242 PF07672 MFS_Mycoplasma: Mycop 96.9 0.0051 1.1E-07 54.8 8.5 175 159-340 2-199 (267)
243 KOG0253 Synaptic vesicle trans 96.7 0.0072 1.6E-07 56.6 8.4 132 69-227 391-522 (528)
244 COG0738 FucP Fucose permease [ 96.7 0.11 2.5E-06 49.2 16.1 115 27-156 239-354 (422)
245 COG3104 PTR2 Dipeptide/tripept 96.7 0.008 1.7E-07 58.3 8.4 91 245-337 15-112 (498)
246 KOG4332 Predicted sugar transp 96.6 0.015 3.2E-07 52.2 9.2 62 42-104 55-116 (454)
247 PF05978 UNC-93: Ion channel r 96.4 0.22 4.9E-06 41.1 14.7 102 65-182 43-144 (156)
248 PF06779 DUF1228: Protein of u 95.9 0.097 2.1E-06 38.4 8.9 66 41-107 9-74 (85)
249 KOG3762 Predicted transporter 95.9 0.13 2.8E-06 50.6 11.9 143 31-188 378-521 (618)
250 TIGR00805 oat sodium-independe 95.7 0.055 1.2E-06 55.3 9.6 76 28-103 334-412 (633)
251 PF00083 Sugar_tr: Sugar (and 95.7 3.9E-05 8.4E-10 74.6 -12.9 162 46-228 275-440 (451)
252 PF05631 DUF791: Protein of un 95.4 0.35 7.6E-06 45.3 12.6 73 258-333 42-115 (354)
253 PF00854 PTR2: POT family; In 94.6 0.56 1.2E-05 44.4 12.2 77 135-221 42-120 (372)
254 KOG0252 Inorganic phosphate tr 94.2 0.13 2.8E-06 49.6 6.6 138 75-228 364-501 (538)
255 PF06609 TRI12: Fungal trichot 93.8 3.1 6.7E-05 42.1 15.8 126 45-182 331-460 (599)
256 PTZ00207 hypothetical protein; 93.4 0.76 1.6E-05 46.5 10.8 67 267-337 44-111 (591)
257 PF06779 DUF1228: Protein of u 93.3 0.82 1.8E-05 33.6 8.1 67 268-337 10-77 (85)
258 TIGR00806 rfc RFC reduced fola 93.1 0.88 1.9E-05 44.7 10.3 67 269-337 44-112 (511)
259 PF06963 FPN1: Ferroportin1 (F 92.6 9.9 0.00021 37.0 16.8 130 45-182 279-411 (432)
260 KOG1237 H+/oligopeptide sympor 92.3 5.4 0.00012 40.3 15.1 188 23-222 35-243 (571)
261 PRK03612 spermidine synthase; 92.0 14 0.00031 36.9 20.6 37 48-84 38-75 (521)
262 KOG2563 Permease of the major 90.7 0.88 1.9E-05 44.0 7.2 49 55-103 297-345 (480)
263 KOG0255 Synaptic vesicle trans 90.3 20 0.00044 35.4 19.2 136 71-229 362-497 (521)
264 PF03092 BT1: BT1 family; Int 89.6 7.4 0.00016 37.8 13.0 161 56-226 252-414 (433)
265 KOG1479 Nucleoside transporter 89.1 22 0.00047 34.2 18.1 51 35-85 29-82 (406)
266 KOG3097 Predicted membrane pro 88.7 21 0.00045 33.4 17.2 60 276-339 302-362 (390)
267 PF02487 CLN3: CLN3 protein; 88.4 24 0.00052 34.0 15.0 51 135-186 344-394 (402)
268 COG3202 ATP/ADP translocase [E 86.7 34 0.00075 33.7 32.7 210 55-267 57-299 (509)
269 KOG2816 Predicted transporter 86.5 21 0.00047 35.0 13.9 119 54-188 272-391 (463)
270 KOG3098 Uncharacterized conser 85.5 39 0.00084 33.2 17.8 116 61-180 281-405 (461)
271 KOG0637 Sucrose transporter an 84.6 0.42 9.2E-06 46.1 1.1 83 253-337 35-122 (498)
272 KOG1330 Sugar transporter/spin 84.3 2.7 5.8E-05 40.9 6.3 58 275-334 57-115 (493)
273 TIGR00926 2A1704 Peptide:H+ sy 83.8 2.9 6.4E-05 42.9 6.8 70 266-337 3-74 (654)
274 KOG3810 Micronutrient transpor 83.4 42 0.0009 31.8 14.6 46 141-187 109-154 (433)
275 KOG2615 Permease of the major 82.2 5.2 0.00011 38.1 7.1 49 284-334 66-115 (451)
276 PF06813 Nodulin-like: Nodulin 79.9 6.1 0.00013 35.4 6.6 67 267-337 19-86 (250)
277 TIGR00939 2a57 Equilibrative N 71.2 1E+02 0.0023 30.0 13.1 49 134-183 380-428 (437)
278 KOG2325 Predicted transporter/ 67.1 4.3 9.3E-05 39.9 2.6 62 275-337 59-122 (488)
279 PF05653 Mg_trans_NIPA: Magnes 57.2 77 0.0017 29.2 8.8 75 244-335 45-121 (300)
280 COG0477 ProP Permeases of the 56.2 78 0.0017 27.3 8.7 42 290-333 43-85 (338)
281 PF03137 OATP: Organic Anion T 53.1 4.5 9.7E-05 40.6 0.0 70 264-335 16-86 (539)
282 KOG1479 Nucleoside transporter 51.9 1.5E+02 0.0032 28.6 9.9 46 46-92 265-315 (406)
283 PF05978 UNC-93: Ion channel r 50.1 1.4E+02 0.0031 24.5 9.8 37 294-332 45-82 (156)
284 PF02990 EMP70: Endomembrane p 49.8 1.7E+02 0.0036 29.3 10.5 33 293-325 304-339 (521)
285 PF10639 UPF0546: Uncharacteri 49.8 1E+02 0.0022 23.9 7.0 76 240-331 32-109 (113)
286 TIGR00880 2_A_01_02 Multidrug 49.0 1.1E+02 0.0024 22.9 15.0 49 288-338 89-138 (141)
287 PF13000 Acatn: Acetyl-coenzym 47.3 3.1E+02 0.0067 27.5 14.5 43 135-178 414-456 (544)
288 TIGR00769 AAA ADP/ATP carrier 45.4 3.1E+02 0.0068 27.1 18.0 68 135-212 275-342 (472)
289 PF02487 CLN3: CLN3 protein; 44.7 3E+02 0.0065 26.6 19.7 136 61-226 61-197 (402)
290 COG5336 Uncharacterized protei 43.7 79 0.0017 24.3 5.3 33 62-94 45-77 (116)
291 PF01578 Cytochrom_C_asm: Cyto 42.3 2.2E+02 0.0048 24.4 11.7 27 302-329 172-198 (214)
292 TIGR02908 CoxD_Bacillus cytoch 41.7 1.6E+02 0.0035 22.7 7.2 51 41-91 35-86 (110)
293 PF13386 DsbD_2: Cytochrome C 41.4 2.2E+02 0.0048 24.1 17.4 27 289-315 153-180 (199)
294 PF09527 ATPase_gene1: Putativ 40.6 88 0.0019 20.5 4.8 24 69-93 10-34 (55)
295 COG5336 Uncharacterized protei 40.5 1.5E+02 0.0033 22.8 6.4 55 158-220 37-91 (116)
296 COG4137 ABC-type uncharacteriz 39.8 2.8E+02 0.006 24.8 12.0 29 300-329 219-247 (265)
297 KOG3626 Organic anion transpor 38.6 1.4E+02 0.0031 31.1 8.1 58 29-86 397-456 (735)
298 PF03596 Cad: Cadmium resistan 38.0 1E+02 0.0023 26.3 6.0 16 309-324 159-174 (191)
299 PF03219 TLC: TLC ATP/ADP tran 33.7 4.9E+02 0.011 25.9 11.3 71 135-215 291-361 (491)
300 PF13073 DUF3937: Protein of u 33.0 76 0.0016 21.7 3.4 38 247-284 2-39 (73)
301 PF11947 DUF3464: Protein of u 31.2 1.6E+02 0.0035 24.2 5.8 34 142-177 111-144 (153)
302 TIGR02230 ATPase_gene1 F0F1-AT 31.1 2.1E+02 0.0045 21.7 5.9 19 267-285 56-74 (100)
303 KOG4332 Predicted sugar transp 30.4 90 0.0019 28.7 4.5 66 245-315 36-102 (454)
304 KOG2601 Iron transporter [Inor 29.3 2.4E+02 0.0052 27.3 7.2 65 26-94 33-98 (503)
305 PF11872 DUF3392: Protein of u 27.1 2.5E+02 0.0054 21.5 5.8 43 36-85 61-105 (106)
306 KOG3574 Acetyl-CoA transporter 23.2 7.1E+02 0.015 24.3 9.5 133 48-188 289-430 (510)
307 PF00032 Cytochrom_B_C: Cytoch 20.6 3.5E+02 0.0076 20.2 5.7 39 55-93 26-64 (102)
No 1
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-39 Score=307.43 Aligned_cols=317 Identities=20% Similarity=0.252 Sum_probs=265.4
Q ss_pred CCCCCCCCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhc----ccCC
Q 018940 14 DDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID----RFGH 88 (348)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~D----r~Gr 88 (348)
+|+.+++++.+++++|++|+++.++.......|++.||+|+ |+|+..+|.+..+.+++|++.||+.|.++| ||||
T Consensus 2 ~~~~~~kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr 81 (467)
T COG2211 2 QNSSSKKLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR 81 (467)
T ss_pred CCcccCcccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc
Confidence 45667899999999999999999999999999999999998 999999999999999999999999999999 5999
Q ss_pred chHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHH
Q 018940 89 FKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCR 168 (348)
Q Consensus 89 rr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~ 168 (348)
||||+++++++.++..+++|. .|. ++...+..+..+.| .+++++|+..+.|+.++.++++++++||.+++++|
T Consensus 82 fRP~lL~g~ip~~i~~~l~F~--~p~-~~~~~k~~ya~vtY----~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R 154 (467)
T COG2211 82 FRPWLLWGAIPFAIVAVLLFI--TPD-FSMTGKLIYALVTY----MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWR 154 (467)
T ss_pred ccHHHHHHhHHHHHHHHHHHc--CCC-cccCcchHHHHHHH----HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHH
Confidence 999999999999999988886 342 22223444444445 47889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-c--CCchhHHHHHH
Q 018940 169 NAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL-R--GNSHARISWAY 245 (348)
Q Consensus 169 ~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~-~--~~~~~~~~~~~ 245 (348)
+.+.++|..+...+.+|++..+++ +|...||+....++++++.+..+++++.+|||..+.++ + .+.+.++.+..
T Consensus 155 ~~~~~~g~~l~~~~~~plv~~~g~---~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~ 231 (467)
T COG2211 155 MVFASLGGLLVAVLFPPLVKLFGG---GDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLL 231 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC---CcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHH
Confidence 999999999999999999988775 23478999999999999999999999999997653332 1 34556667778
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHH
Q 018940 246 WFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGG 324 (348)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~ 324 (348)
++|||+++.+++.+++...+.+...+....|.+..+|.+.............+.+++.++.|.+ +|+||| +++.++.
T Consensus 232 ~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk--~~~~~~~ 309 (467)
T COG2211 232 IFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK--KLFLIGL 309 (467)
T ss_pred HHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH--HHHHHHH
Confidence 9999999988888888877777666666777777777666544444444445556668888988 999999 9999999
Q ss_pred HHHHHHHHhHhhccCCce
Q 018940 325 VLWVFCGAGILILPMNMS 342 (348)
Q Consensus 325 ~l~~v~~~~~~~~~~~~~ 342 (348)
++.+++++.++|.+.+..
T Consensus 310 ~~~~i~~~~~~f~~~~~~ 327 (467)
T COG2211 310 LLLAVGYLLLYFTPAGSV 327 (467)
T ss_pred HHHHHHHHHHHhhcCcch
Confidence 999999999999985543
No 2
>PRK11462 putative transporter; Provisional
Probab=100.00 E-value=7.1e-34 Score=277.14 Aligned_cols=303 Identities=15% Similarity=0.225 Sum_probs=233.6
Q ss_pred CCCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc----cCCchHHH
Q 018940 19 QPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR----FGHFKIWH 93 (348)
Q Consensus 19 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr----~Grrr~~i 93 (348)
++++.++++.|++|+++.+..+.++..|++.||+|+ |+++..+|.++.+.+++|++.||+.|+++|| |||||||+
T Consensus 4 ~~l~~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~i 83 (460)
T PRK11462 4 EVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWV 83 (460)
T ss_pred CcccHhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhH
Confidence 578999999999999999999999999999999998 9999999999999999999999999999994 89999999
Q ss_pred HHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHH
Q 018940 94 GAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173 (348)
Q Consensus 94 ~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ 173 (348)
+.+.++.+++++++|. .|. + +.....+++.+...++.+++++.++|+.++.+|+++|++||+++++++..+.+
T Consensus 84 l~g~i~~~i~~~llf~--~p~-~----s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~ 156 (460)
T PRK11462 84 LFGALPFGIVCVLAYS--TPD-L----SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLAT 156 (460)
T ss_pred hHHHHHHHHHHHHHHh--CCC-C----CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 9999999999988875 352 1 11112233333334678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHH
Q 018940 174 VANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYY 253 (348)
Q Consensus 174 ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
+|..+++.+..|++..+++ ++...+|+....+++++++++.++++...||+.+++ +++.+.++.++..++||+++
T Consensus 157 iG~~~~~~~~~plv~~~g~---~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~--~~~~~~~~~l~~~~~Nk~~~ 231 (460)
T PRK11462 157 AGGMLSTVLMMPLVNLIGG---DNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAP--PTTTSMREDLRDIWQNDQWR 231 (460)
T ss_pred HHHHHHHHHHHHHHHHhCC---CchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCC--ccCCCHHHHHHHHhCChHHH
Confidence 9998888887787766553 123468998888888888888888888888864322 22334677888999999988
Q ss_pred HHHHHHH---HHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHH
Q 018940 254 QVALVYM---LTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVF 329 (348)
Q Consensus 254 ~~~l~~~---~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v 329 (348)
.+....+ +......+...|+.+|..+.. . ..+.+..+..++++++.++.+++ ||+||| +.+..+..+.++
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~---~-~~~~~l~~~~i~~iig~~l~~~l~~r~gkk--~~~~~~~~~~~~ 305 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWILGTP---E-VFVAFLTTYCVGNLIGSALAKPLTDWKCKV--TIFWWTNALLAV 305 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh---H-HHHHHHHHHHHHHHHHHHHHHHHHHHhChH--HHHHHHHHHHHH
Confidence 7654433 334455677778888875432 2 22334445567788888889987 999998 766555444444
Q ss_pred HHHhHhhccC
Q 018940 330 CGAGILILPM 339 (348)
Q Consensus 330 ~~~~~~~~~~ 339 (348)
..+.+++.+.
T Consensus 306 ~~~~~~~~~~ 315 (460)
T PRK11462 306 ISLAMFFVPM 315 (460)
T ss_pred HHHHHHHhch
Confidence 4444445443
No 3
>PRK10429 melibiose:sodium symporter; Provisional
Probab=100.00 E-value=5.1e-33 Score=272.31 Aligned_cols=304 Identities=16% Similarity=0.210 Sum_probs=232.5
Q ss_pred CCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhc----ccCCchHHHH
Q 018940 20 PVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFKIWHG 94 (348)
Q Consensus 20 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~D----r~Grrr~~i~ 94 (348)
+++.+++++|++|+++.+..+..+.+|+++||+|+ |+|+.++|.++++.+++|++.||+.|+++| ||||||||++
T Consensus 2 ~l~~~~~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il 81 (473)
T PRK10429 2 SISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWIL 81 (473)
T ss_pred CCchhHHHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHh
Confidence 57789999999999999999999999999999998 999999999999999999999999999999 6799999999
Q ss_pred HHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHH
Q 018940 95 AGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMV 174 (348)
Q Consensus 95 ~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~i 174 (348)
.+.++.+++++++|. .|. .+.....+++.+...++++++++.++|+.++.+|++++++||.++++++..+.++
T Consensus 82 ~g~i~~~i~~~llf~--~p~-----~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~i 154 (473)
T PRK10429 82 IGTLANSVVLFLLFS--AHL-----FEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASL 154 (473)
T ss_pred hhhHHHHHHHHHHHc--CCC-----CCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHH
Confidence 999999998877775 231 1111122233333346788999999999999999998899999999998888888
Q ss_pred HHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccc----ccCCchhHHHHHHHHHhH
Q 018940 175 ANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG----LRGNSHARISWAYWFKKI 250 (348)
Q Consensus 175 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~----~~~~~~~~~~~~~~~~~~ 250 (348)
|+.+.+.+..|++..++.. +...+|++...+++++..+..+++++.+||+..+++ ++++.+.++.++.+++||
T Consensus 155 g~~~~~~~~~~~~~~~g~~---~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 231 (473)
T PRK10429 155 AGFVTAGFTLPFVNYVGGG---DRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKND 231 (473)
T ss_pred HHHHHHHHHHHHHHHhCCC---chhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCH
Confidence 8777776666766554431 234589998888888888888888888888632211 123345677788888999
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHH
Q 018940 251 LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVF 329 (348)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v 329 (348)
+++.+.+..++.+...+....+.+.|.+...+. .+..+.+..+..++.+++.++.+++ ||+||| +.+..++++.++
T Consensus 232 ~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk--~~~~~~~~~~~~ 308 (473)
T PRK10429 232 QLSCLLGMALAYNIASNIINGFAIYYFTYVIGD-ADLFPYYLSYAGAANLVTLILFPRLVKSLSRR--ILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeeEEEEECCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHH
Confidence 988877777766666666666655444444443 3333344444456778888888887 999999 888888887777
Q ss_pred HHHhHhh
Q 018940 330 CGAGILI 336 (348)
Q Consensus 330 ~~~~~~~ 336 (348)
+.+.+++
T Consensus 309 ~~~~~~~ 315 (473)
T PRK10429 309 SCGVLLL 315 (473)
T ss_pred HHHHHHH
Confidence 7665543
No 4
>PRK09669 putative symporter YagG; Provisional
Probab=100.00 E-value=7.7e-33 Score=268.91 Aligned_cols=309 Identities=18% Similarity=0.189 Sum_probs=229.7
Q ss_pred CCCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc----cCCchHHH
Q 018940 19 QPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR----FGHFKIWH 93 (348)
Q Consensus 19 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr----~Grrr~~i 93 (348)
++++.++++.|++|+++.+..+..+..|+++||+|. |+|+.++|.++++.+++|++.||+.|+++|| |||||||+
T Consensus 4 ~~l~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~i 83 (444)
T PRK09669 4 SQLTTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYL 83 (444)
T ss_pred CcccHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhH
Confidence 578999999999999999998888899999999997 9999999999999999999999999999997 99999999
Q ss_pred HHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHH
Q 018940 94 GAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173 (348)
Q Consensus 94 ~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ 173 (348)
+.+.++.+++..++|. .|. . +.......+.+...+++.++++.++|+.++.+|++++++||+++++++..+.+
T Consensus 84 l~~~~~~~i~~~l~f~--~p~-~----~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~ 156 (444)
T PRK09669 84 LWFAIPFGVVCLLTFY--TPD-F----GATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSF 156 (444)
T ss_pred HHHHHHHHHHHHHHHh--CCC-C----CcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHH
Confidence 9999998888876664 352 1 11111222232234667888999999999999999888999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHH
Q 018940 174 VANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYY 253 (348)
Q Consensus 174 ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
+|+.+++.+..|+...++. ++...+|+..+.+++++..+..+++++..||+..+++ +++.+.++.+++++|||+++
T Consensus 157 ~G~~i~~~~~~pl~~~~~~---~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~-~~~~~~~~~~~~~~~n~~~~ 232 (444)
T PRK09669 157 IGGLIVSVIALPLVDILGK---GDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEV-DNSSSVWKDLKLLLGNSQWR 232 (444)
T ss_pred HHHHHHHHHHHHHHHHhCC---CchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCC-cCCCCHHHHHHHHhCCchHH
Confidence 9998888877777766542 1235689999988888888887788888888543322 23344567788999999988
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHH
Q 018940 254 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGA 332 (348)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~ 332 (348)
.+.+..++............+.|.+...+.. +..+.+.....++++++.++.+++ ||+||| +.+..+.++.+++.+
T Consensus 233 ~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~-~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~--~~~~~~~~~~~~~~~ 309 (444)
T PRK09669 233 IMFIFNVVLLTAVVTRGGATLYYVNYVLLRP-DLATLFLVTGMIAGLFGALLSERLLGKFDRV--RAFKWTIVAFVILSA 309 (444)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeeeeecCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--HHHHHHHHHHHHHHH
Confidence 8766655554444333333333333333322 222233334456677888888887 999999 888888777666555
Q ss_pred hHhhccCCc
Q 018940 333 GILILPMNM 341 (348)
Q Consensus 333 ~~~~~~~~~ 341 (348)
.+++.+++.
T Consensus 310 ~~~~~~~~~ 318 (444)
T PRK09669 310 LIFFIPPSN 318 (444)
T ss_pred HHHHhCcch
Confidence 555554433
No 5
>PF13347 MFS_2: MFS/sugar transport protein
Probab=100.00 E-value=3.3e-34 Score=277.27 Aligned_cols=305 Identities=25% Similarity=0.374 Sum_probs=243.5
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhc----ccCCchHHHHHHHHH
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFKIWHGAGSVL 99 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~D----r~Grrr~~i~~~~~~ 99 (348)
++.+|++|+++.+..+.....|+++|++|. |+++..+|.+..+.+++|++.||+.|+++| ||||||||++.|.++
T Consensus 2 ~~~ay~~g~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~ 81 (428)
T PF13347_consen 2 KKLAYGIGDLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAIL 81 (428)
T ss_pred cEEEeeHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHH
Confidence 346799999999999999999999999998 999999999999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHH
Q 018940 100 VAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (348)
Q Consensus 100 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~ 179 (348)
.+++++++|.+ .|...+ .........+...++.++++..++|+.++.+|++++++||.+++++++.+..+|..+.
T Consensus 82 ~~~~~~llf~~-~p~~~~----~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~ 156 (428)
T PF13347_consen 82 LALSFFLLFSP-PPAGLS----FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLA 156 (428)
T ss_pred HHHHHHHhhcc-ccchhh----hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHH
Confidence 99999888741 132111 1111122233334678999999999999999999989999999999999999999877
Q ss_pred HHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccc-ccccCCchhHHHHHHHHHhHHHHHHHHH
Q 018940 180 YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK-MGLRGNSHARISWAYWFKKILYYQVALV 258 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (348)
+.+.++++..++.. +...+|++...+.+++..+..++.++.+||++.+ ++++++.+.++.+++++|||+++.+.+.
T Consensus 157 ~~~~~~l~~~~g~~---~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~ 233 (428)
T PF13347_consen 157 SFLAPILVSWFGGG---DTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLA 233 (428)
T ss_pred HHHhhhhhhhhccC---ccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHH
Confidence 77777777655531 1124899999999999999999999999993222 2233455667788999999999988888
Q ss_pred HHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 259 YMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
.++.+.+........+.|.++..|.+. ..+.+..+..++++++.++.+++ ||+||| +.+..+.++.+++.+++++.
T Consensus 234 ~~~~~~~~~~~~~~~~y~~~~vl~~~~-~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~--~~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 234 FFLQWLAFALMNTFLPYYFTYVLGNEG-LISIFMLIFFVASIVGSPLWGRLSKRFGKK--KVYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHhcCch-hhHHHHHHHHHHHHHHHHHHHHHHHHccce--eehhhhHHHHHHHHHHHHHH
Confidence 777777666666566666666666553 33445555677888999989998 999999 99999999999999999988
Q ss_pred cCC
Q 018940 338 PMN 340 (348)
Q Consensus 338 ~~~ 340 (348)
+++
T Consensus 311 ~~~ 313 (428)
T PF13347_consen 311 GPG 313 (428)
T ss_pred Hhh
Confidence 743
No 6
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=100.00 E-value=2.9e-31 Score=256.72 Aligned_cols=300 Identities=20% Similarity=0.288 Sum_probs=231.4
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc----cCCchHHHHHHHHHH
Q 018940 26 VLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR----FGHFKIWHGAGSVLV 100 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr----~Grrr~~i~~~~~~~ 100 (348)
++.|++|+++.+..+.+..+|+++|++|. |+|+.++|+++++..+++++.+|+.|+++|| +|||||+++.+.++.
T Consensus 1 ~~~yg~g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~ 80 (437)
T TIGR00792 1 KLSYGFGDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPF 80 (437)
T ss_pred CeeeecchHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHH
Confidence 46899999999999999999999999987 9999999999999999999999999999996 899999999998888
Q ss_pred HHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHH
Q 018940 101 AVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (348)
Q Consensus 101 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~ 180 (348)
+++...++. .|. .+.......+.+...+.+++++...+|+.++.+|++++++||+++.++++.+..+|+.+++
T Consensus 81 ~i~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~ 153 (437)
T TIGR00792 81 SIVLVLLFT--TPD-----FSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVA 153 (437)
T ss_pred HHHHHHHHh--CCC-----CCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888776664 231 1111112223333346788889999999999999998889999999999999999998888
Q ss_pred HHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc--cCCchhHHHHHHHHHhHHHHHHHHH
Q 018940 181 AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL--RGNSHARISWAYWFKKILYYQVALV 258 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (348)
.+.+|+...+++ +++..+|++.+.+.++++++..++.++.+||++.+.++ +++.+.++.++++++||+++...+.
T Consensus 154 ~~~~~l~~~~~~---~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (437)
T TIGR00792 154 VIVLPLVSYFGG---GDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLA 230 (437)
T ss_pred HHHHHHHHHhCC---CcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHH
Confidence 877777765442 12356899999999888888888888888886432111 2233456778889999998887777
Q ss_pred HHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 259 YMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
.++.+........+.+.|.+...+ +....+.+..+..++.+++.++.+++ ||+||| +.+..+..+.+++.+...+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~ 307 (437)
T TIGR00792 231 YLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK--ILFAGGILLMVLGYLIFFFA 307 (437)
T ss_pred HHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHc
Confidence 776666666655555666665555 33334444455567888889889987 999999 88888988888887776665
Q ss_pred c
Q 018940 338 P 338 (348)
Q Consensus 338 ~ 338 (348)
+
T Consensus 308 ~ 308 (437)
T TIGR00792 308 G 308 (437)
T ss_pred c
Confidence 4
No 7
>PRK09848 glucuronide transporter; Provisional
Probab=99.98 E-value=6.7e-30 Score=248.56 Aligned_cols=308 Identities=17% Similarity=0.215 Sum_probs=226.2
Q ss_pred CCCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc----cCCchHHH
Q 018940 19 QPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR----FGHFKIWH 93 (348)
Q Consensus 19 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr----~Grrr~~i 93 (348)
++++.++++.|++|+++++....+..+|++.|+++. |+++.++|.++++..+++++.+|+.|+++|| +||||||+
T Consensus 3 ~~~~~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~ 82 (448)
T PRK09848 3 QQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFL 82 (448)
T ss_pred CcccHHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHH
Confidence 578899999999999999999999899999999997 9999999999999999999999999999997 59999998
Q ss_pred HHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHH
Q 018940 94 GAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173 (348)
Q Consensus 94 ~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ 173 (348)
+.+.++..+....++. .|..+.+.... ....+...+.+++++..++|+.++..+++.+++||.+.+++|..+.+
T Consensus 83 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~ 156 (448)
T PRK09848 83 LFGTAPLMIFSVLVFW--VPTDWSHSSKV----VYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAAS 156 (448)
T ss_pred HHHHHHHHHHHHHHHh--CcCCCCcchHH----HHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHH
Confidence 8888777766655553 23111111111 11222223677889999999999999999888999999999988877
Q ss_pred HHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHH
Q 018940 174 VANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYY 253 (348)
Q Consensus 174 ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
++....+...+|++....+ ++...+|.....++++++.+..++++...||+..++ +++.+.++.+++++|||+++
T Consensus 157 ~~~~~~~~~~~p~i~~~~g---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~~~l~~n~~f~ 231 (448)
T PRK09848 157 LTFVCLAFLIGPSIKNSSP---EEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRI--VAQPSLKISLQTLKRNRPLF 231 (448)
T ss_pred HHHHHHHHHHHHHHHHhCC---CchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCC--ccCCCHHHHHHHHhCCchHH
Confidence 7766655555666654322 111224433334455666666666666778753322 22334566788899999998
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHH
Q 018940 254 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGA 332 (348)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~ 332 (348)
...+..++...+......+.|.|+++..|.+.....+......++.+++.++.+++ ||+|+| +.+..|.++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~--~~~~~g~~~~~i~~~ 309 (448)
T PRK09848 232 MLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK--NTFLIGALLGTCGYL 309 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHH
Confidence 88777777777777777778888888888766443333222334567777888887 999999 889999999888887
Q ss_pred hHhhccC
Q 018940 333 GILILPM 339 (348)
Q Consensus 333 ~~~~~~~ 339 (348)
.+.+.+.
T Consensus 310 ~~~~~~~ 316 (448)
T PRK09848 310 LFFWVSV 316 (448)
T ss_pred HHHHcCc
Confidence 7776543
No 8
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.92 E-value=1.4e-22 Score=192.22 Aligned_cols=273 Identities=13% Similarity=0.054 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcc
Q 018940 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~ 116 (348)
........+.+|.+.++.|.|+.+.|++.++..+...+.+++.|+++||+||||.++ .+....+++...... .
T Consensus 18 ~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~-~~~~~~~~~~~~~~~--~---- 90 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLL-LGLFIFALSSLGLAL--S---- 90 (385)
T ss_pred HHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH-HHHHHHHHHHHHHHH--H----
Confidence 334445556666666677999999999999999999999999999999999988754 566666665543321 1
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc
Q 018940 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHA 196 (348)
Q Consensus 117 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~ 196 (348)
.+.....+. ..+.+++.+...++..+++.|..+ +++|++..+..+....+|..+++.+.+.+.
T Consensus 91 ---~~~~~~~~~----~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~--------- 153 (385)
T TIGR00710 91 ---NNIETLLVL----RFVQAFGASAGSVISQALVRDIYP-GEELSRIYSILMPVLALAPAVAPLLGGYIL--------- 153 (385)
T ss_pred ---ccHHHHHHH----HHHHHcchhHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 123322222 235677777777788889999885 678999999998888888877766654433
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 018940 197 DLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFY 276 (348)
Q Consensus 197 ~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y 276 (348)
+..+|++.+.+.+++.++..++.++..||++.+++++++++.++.+++.+|||+++...+...+..........+.|.|
T Consensus 154 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T TIGR00710 154 -VWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFV 232 (385)
T ss_pred -HHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHH
Confidence 2357999988887777777666666677754332222222334456778899988776666555556666777788999
Q ss_pred HhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhh
Q 018940 277 VINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILI 336 (348)
Q Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~ 336 (348)
++++.|.++.+.+.......++.+++.++.+++ ||+|+| +.+..+..+..++.+.+.+
T Consensus 233 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~--~~~~~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 233 YIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK--SLLRMGLILFAVSAVLLEI 291 (385)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHH
Confidence 998889988777766666677888899999997 999998 7777777666666555444
No 9
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=4.1e-22 Score=186.96 Aligned_cols=286 Identities=15% Similarity=0.082 Sum_probs=193.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
.+.+.......+....+|.|..+.+.++.++|++.++..+..++.+|+.|+++||+||||.++ .+....++.......
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~-~~~~~~~~~~~~~~~- 83 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMI-GADLIRAVLVAVLPF- 83 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHH-HHHHHHHHHHHHHHH-
Confidence 344555555666677788888888999999999999999999999999999999999999865 454444444322211
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~ 190 (348)
.+. ....+.+..... ..+.+++.+...++..++++|..+ ++||++..++.+....+|..+++.+++.+.
T Consensus 84 -~~~--~~~~~~~~~~~~----~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~--- 152 (365)
T TIGR00900 84 -VAL--LGGLNIWQVYVL----AGILAIAQAFFTPAYQAMLPDLVP-EEQLTQANSLSQAVRSLFYIVGPGIGGLMY--- 152 (365)
T ss_pred -HHH--cCCCcHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHH---
Confidence 010 001133322222 235677778888888899999885 578999999999999999888776655443
Q ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHHHHHhh-cccccccccccCC----chhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 018940 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSR-TEEPRLKMGLRGN----SHARISWAYWFKKILYYQVALVYMLTRLV 265 (348)
Q Consensus 191 ~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~-~~e~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 265 (348)
+..+|++.+.+.++..++..++.+.. .||++.+++++.+ ++.++.++..+|||.++...+..++....
T Consensus 153 -------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (365)
T TIGR00900 153 -------ATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLV 225 (365)
T ss_pred -------HHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 24589998887665554443333322 2332111111111 12344567788888887766666555555
Q ss_pred HHhhh-HHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhcc
Q 018940 266 VNVSQ-AYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILP 338 (348)
Q Consensus 266 ~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~ 338 (348)
..... .+.|.|.++..|.+..+.+.......++.+++.++.+++ ||++|| +.+..+..+.+++.....+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 298 (365)
T TIGR00900 226 FAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM--ALMTGAIFVIGLAILVVGLTP 298 (365)
T ss_pred HHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh--HHHHHHHHHHHHHHHHHHhhc
Confidence 55555 788888888788888777766666777888888888888 888888 777777766666666555544
No 10
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.92 E-value=4.5e-22 Score=187.53 Aligned_cols=278 Identities=13% Similarity=0.065 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhccc-----CCchHHHHHHHHHHHHHHHHHhcCcCCCcc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRF-----GHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~-----Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~ 116 (348)
.....+|.+.+|.|+|.+++|.+... .+..++ ++++|+++||+ ||||++++.+.+..++.+..+.. .+
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~--~~--- 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSF--LV--- 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHc--CC---
Confidence 34456677778889999999999766 444455 99999999997 99999887777777666543321 12
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc
Q 018940 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHA 196 (348)
Q Consensus 117 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~ 196 (348)
+..+...... ...+.+.+.+...++..++++|..+ +|+|+++.+++..+..+|.++++.+.+.+...++..+
T Consensus 79 -~~~~l~~l~~----~~~~~~~~~~~~~~~~~a~~~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~-- 150 (356)
T TIGR00901 79 -PSTDLPLLAG----LAFLIAFFSATQDIALDAWRLEILS-DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANT-- 150 (356)
T ss_pred -cchhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCC-HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--
Confidence 1112221211 1124556667778889999999984 6889999999999999998888777655554333110
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhccccccccccc--CCchhHHHHHHHHHhHH---HHHHHHHHHHHHHHHHhhhH
Q 018940 197 DLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR--GNSHARISWAYWFKKIL---YYQVALVYMLTRLVVNVSQA 271 (348)
Q Consensus 197 ~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~ 271 (348)
....+||..+++.++..++..++.++..||++.+++++ ++++.++.+++++|||. ++.+.+..++.+...+...+
T Consensus 151 ~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T TIGR00901 151 GLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATV 230 (356)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 12345999999888777666555555567753321111 11223456777888875 55555556666677788889
Q ss_pred HHHHHHhhcccccchhhhHHhHHHH-HHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 272 YLAFYVINDLRMGQSAKALVPAIIY-ICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 272 ~~~~yl~~~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
++|.|+++ .|++.++.+....+.. ++.+++.++.+++ ||+|+| +.+..+.++.+++.....+.
T Consensus 231 ~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~--~~l~~~~~~~~~~~~~~~~~ 295 (356)
T TIGR00901 231 LTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL--YALLLFGIVQALTNAGFVWL 295 (356)
T ss_pred HHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH--HHHHHHHHHHHHHHHHHHHH
Confidence 99999988 7888877665444333 4667888999998 999998 77777777777766655443
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=99.92 E-value=8.4e-22 Score=188.19 Aligned_cols=274 Identities=10% Similarity=-0.036 Sum_probs=186.4
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
....-.+..+..........+.+|.+.+|.|.|+.++|++.+...+...+.+++.|.++||+||||.+. .+....+++.
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~ 88 (390)
T PRK03545 10 RVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLI-GLFVLFIASH 88 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHH-HHHHHHHHHH
Confidence 344445555544333344445667776777999999999999999999999999999999999998764 5666666665
Q ss_pred HHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018940 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~ 184 (348)
..... . .+.....+.+ .+.+++.+...+...+++++..+ +|+|++..++...+..+|..+++.+.+
T Consensus 89 ~~~~~--~-------~~~~~l~~~r----~~~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~g~~~~~~~~g~~ig~~l~~ 154 (390)
T PRK03545 89 VLSAL--A-------WNFTVLLISR----IGIAFAHAIFWSITASLAIRVAP-AGKKAQALSLLATGTALAMVLGLPLGR 154 (390)
T ss_pred HHHHH--h-------ccHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCC-hhhhhhHHHHHHHHHHHHHHHHhhHHH
Confidence 43321 1 2333332222 35566666666667788888875 678999999988888888777655543
Q ss_pred HHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 018940 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRL 264 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 264 (348)
.+. +..|||+.+.+.+++.++..++.+...||++++ ++++ .+..++.+|||.++...+..++...
T Consensus 155 ~l~----------~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (390)
T PRK03545 155 VIG----------QYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE----HSGS-LKSLPLLFRRPALVSLYLLTVVVVT 219 (390)
T ss_pred HHH----------HHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC----Ccch-HHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 332 245899999988887777666666566664321 1111 2345678999987765555555545
Q ss_pred HHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 265 VVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 265 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
.......|.+.|+++..|.+..+.+.......++++++.++.+++ ||+++| +. ..+..+..++.
T Consensus 220 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~--~~-~~~~~~~~~~~ 284 (390)
T PRK03545 220 AHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG--FL-LIAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh--HH-HHHHHHHHHHH
Confidence 555566788888888888887766666566677889999999988 998876 54 33433333333
No 12
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=9.1e-22 Score=184.04 Aligned_cols=294 Identities=12% Similarity=-0.006 Sum_probs=230.7
Q ss_pred CCCCCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHH
Q 018940 17 FTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAG 96 (348)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~ 96 (348)
.+++......+..+++.|.....-.+..+.+|+.-+|+|+|..++|.+.+++.+..+++.|+...+.||+.|||.+ +..
T Consensus 6 ~~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL-l~~ 84 (394)
T COG2814 6 TARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL-LGL 84 (394)
T ss_pred cccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH-HHH
Confidence 3555667778889999988888888889999999999999999999999999999999999999999999998875 456
Q ss_pred HHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHH
Q 018940 97 SVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN 176 (348)
Q Consensus 97 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~ 176 (348)
..+++++-.+... .| ++....+.+. +.++..+.+..-..+..+++.| |++|+++.+....+..++.
T Consensus 85 l~lFi~~n~l~al--Ap-------~f~~Ll~aR~----~~g~a~G~f~~i~~~~a~~lvp-p~~~~~Aiaiv~~G~tlA~ 150 (394)
T COG2814 85 LALFIVSNLLSAL--AP-------SFAVLLLARA----LAGLAHGVFWSIAAALAARLVP-PGKRGRALALVFTGLTLAT 150 (394)
T ss_pred HHHHHHHHHHHHH--hc-------cHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHcC-ccchhhHHHHHHHHHHHHH
Confidence 6677777654332 12 4554545554 5556666666666778888885 6789999998887777776
Q ss_pred HHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHH
Q 018940 177 LSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVA 256 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (348)
+++ .|+-..++ +..|||+.|...+.++++..+..+..+| ++..++ +++.+.++. .+.+|||+.+...
T Consensus 151 v~G----vPLGt~ig------~~~GWR~~F~~ia~l~ll~~~~~~~~lP-~~~~~~-~~~~~~~~~-~~~l~~p~v~~~l 217 (394)
T COG2814 151 VLG----VPLGTFLG------QLFGWRATFLAIAVLALLALLLLWKLLP-PSEISG-SLPGPLRTL-LRLLRRPGVLLGL 217 (394)
T ss_pred HHh----ccHHHHHH------HHhhHHHHHHHHHHHHHHHHHHHHHhCC-CccCCC-CCCcchhHH-HHHhcCchHHHHH
Confidence 664 45544444 3689999999999999999999888888 222111 122222333 4689999988888
Q ss_pred HHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHh
Q 018940 257 LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGIL 335 (348)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~ 335 (348)
+..++...+.....+|+-.+++|..|++.+..+...+.+++++++|+.+.+++ || +.| +++.....+.++..+.+.
T Consensus 218 ~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~--~~l~~~~~l~a~~~l~l~ 294 (394)
T COG2814 218 LATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR--RALIAALLLLALALLALT 294 (394)
T ss_pred HHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch--hHHHHHHHHHHHHHHHHH
Confidence 88888888889999999999999999999888888888999999999999998 88 777 888888888888888777
Q ss_pred hccCCc
Q 018940 336 ILPMNM 341 (348)
Q Consensus 336 ~~~~~~ 341 (348)
+.+.+.
T Consensus 295 ~~~~~~ 300 (394)
T COG2814 295 FTGASP 300 (394)
T ss_pred HhcchH
Confidence 766554
No 13
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.92 E-value=2.5e-22 Score=189.37 Aligned_cols=291 Identities=10% Similarity=0.005 Sum_probs=190.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHh
Q 018940 30 GSGHMLNDITAACWFTYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVF 108 (348)
Q Consensus 30 ~~g~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~ 108 (348)
.+..+.....+....+++|.++++ .|+|+.+.|++.++..+.+++.+++.|+++||+||||.++ .+....+++.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~i~~~~~~ 85 (366)
T TIGR00886 7 WFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTT-LSLLLLAIPCLWAG 85 (366)
T ss_pred HHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHH-HHHHHHHHHHHHHH
Confidence 334444455556667788865655 5999999999999999999999999999999999998754 56666666654332
Q ss_pred cCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 109 GGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
. .+ .+.....+.+ .+.+++.+. ..+..+++++..+ +++|++..++.....++|..+++.+.+++..
T Consensus 86 ~--~~------~~~~~~~~~~----~~~g~~~~~-~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 86 L--AV------QSYSVLLLLR----LFIGIAGGS-FASCMPWISFFFP-KKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred H--Hh------hhHHHHHHHH----HHHHHhchh-hHhHHHHHHHhcC-HhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 1 11 0233222222 245555443 3455677888774 6789999999888888888887777666655
Q ss_pred hccCCcccchhhHHHHHH-HHHHHHHHHHHHHHHhhcccccccccccCCch-----------hHHHHHHHHHhHHHHHHH
Q 018940 189 VSTAKTHADLENQYRWIA-YSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSH-----------ARISWAYWFKKILYYQVA 256 (348)
Q Consensus 189 ~~~~~~~~~~~~g~~~~~-~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 256 (348)
.+......+...+||+.+ ...+++..+..++.+...+|.+.+++++++.+ ..+..++.+++|+++...
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILA 231 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHH
Confidence 332100001234799988 44455555555555555555322111110000 011456678888877776
Q ss_pred HHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHh
Q 018940 257 LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGIL 335 (348)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~ 335 (348)
+..++..........+.|.|+++..|.+..+.+.+..+..+.++++.++.+++ ||+|+| +....+..+...+...+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~--~~~~~~~~~~~~~~~~~~ 309 (366)
T TIGR00886 232 LLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA--RKLLMSFLGVAMGAFLVV 309 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc--hhHHHHHHHHHHHHHHHH
Confidence 66666666667788899999999989888777766666667788888888988 999998 666666655555554444
Q ss_pred hc
Q 018940 336 IL 337 (348)
Q Consensus 336 ~~ 337 (348)
+.
T Consensus 310 ~~ 311 (366)
T TIGR00886 310 LG 311 (366)
T ss_pred hc
Confidence 43
No 14
>PRK10133 L-fucose transporter; Provisional
Probab=99.91 E-value=3.4e-21 Score=186.90 Aligned_cols=323 Identities=11% Similarity=-0.018 Sum_probs=207.7
Q ss_pred CcccccccCCCCCCCCCCCCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHh
Q 018940 2 TSSTVMNYDIENDDSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGE 81 (348)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~ 81 (348)
||-....||..|||-..++-.........+..+...+.......++|.+.++.|+|+.+.|++.+...+..++++++.|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~ 83 (438)
T PRK10133 4 TSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGI 83 (438)
T ss_pred cccchhhhhccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444568888888765554544444444444444555556667777775556999999999999999999999999999
Q ss_pred hhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccc
Q 018940 82 LIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSR 161 (348)
Q Consensus 82 l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R 161 (348)
++||+||||.+ ..+....+++..... +.. ...+....... ..+.|++.+...+..++++.+.. ++++|
T Consensus 84 l~dr~G~r~~l-~~g~~~~~~~~~l~~----~~~--~a~~~~~ll~~----r~l~G~g~g~~~~~~~~~v~~~~-~~~~~ 151 (438)
T PRK10133 84 LMKKLSYKAGI-ITGLFLYALGAALFW----PAA--EIMNYTLFLVG----LFIIAAGLGCLETAANPFVTVLG-PESSG 151 (438)
T ss_pred HHHHhCcHHHH-HHHHHHHHHHHHHHH----HHH--hcCCHHHHHHH----HHHHHHHHHHHHhhHHHHHHHhC-ChhhH
Confidence 99999999885 567777777764321 100 01233322222 23678888888888888888764 44556
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------cccch--------hhHHHHHHHHHH-HHHHHHHHHHHhhc
Q 018940 162 VVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK--------THADL--------ENQYRWIAYSSI-FIGCCFVGIFLSRT 224 (348)
Q Consensus 162 ~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~--------~~~~~--------~~g~~~~~~i~~-~i~~~~~ll~~~~~ 224 (348)
.+..+..+....+|..+++.++.++....... ...+. ..+||+++.... +..++..++.....
T Consensus 152 ~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~ 231 (438)
T PRK10133 152 HFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKF 231 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 66677888888888888777765544111000 00000 135666665433 33333333323334
Q ss_pred cccccccccc-CCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhcccccchhhhHHhHHHHHHHHHH
Q 018940 225 EEPRLKMGLR-GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYV-INDLRMGQSAKALVPAIIYICSFIV 302 (348)
Q Consensus 225 ~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl-~~~~~~~~~~~~~~~~~~~~~~i~g 302 (348)
||.+.+++++ ++.+..+..+++++||.++...+..++......+...|.+.|+ ++..|+++.+.+.......++.++|
T Consensus 232 p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG 311 (438)
T PRK10133 232 PALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIG 311 (438)
T ss_pred CCCCccccccccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 4422111111 1112234457889999887665555555566666777899896 5678999887777767777888999
Q ss_pred HHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhcc
Q 018940 303 SILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILP 338 (348)
Q Consensus 303 ~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~ 338 (348)
.++.+++ ||+|+| +++..+..+.+++.+...+.+
T Consensus 312 ~~~~g~l~~r~g~~--~~l~~~~~~~~~~~~~~~~~~ 346 (438)
T PRK10133 312 RFTGTWLISRFAPH--KVLAAYALIAMALCLISAFAG 346 (438)
T ss_pred HHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHcC
Confidence 9999998 999999 777777777666665554443
No 15
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.91 E-value=1.5e-21 Score=187.22 Aligned_cols=272 Identities=14% Similarity=0.046 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhccc-----CCchHHHHHHHHHHHHHHHHHhcCc
Q 018940 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRF-----GHFKIWHGAGSVLVAVSFSSVFGGC 111 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~-----Grrr~~i~~~~~~~~i~~~~l~~~~ 111 (348)
....+....-+|.|+++.|+|.+++|++..+... .+.+|++|+++||+ ||||+|++.+....++++..+..
T Consensus 12 ~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~-- 87 (402)
T PRK11902 12 GLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAF-- 87 (402)
T ss_pred hhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHh--
Confidence 3444555677899999999999999999877776 48899999999999 99999888887777777655432
Q ss_pred CCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 018940 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (348)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~ 191 (348)
.+ +..+.+...+. ..+.+...+...++..++++|..+ +|||+++.+++..+..+|.++++.+...+.+
T Consensus 88 ~~----~~~~~~~l~~~----~~~~~~~~~~~~~~~~al~~~~~~-~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~--- 155 (402)
T PRK11902 88 CP----PHAALWPLAGL----AVLVAFLSASQDIVFDAYSTDVLH-PEERGAGAAVKVLGYRLAMLVSGGLALWLAD--- 155 (402)
T ss_pred cC----ccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcC-hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh---
Confidence 22 11222212111 124556677788889999999974 6789999999998888888887665544431
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccC--CchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 018940 192 AKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG--NSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 269 (348)
Q Consensus 192 ~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (348)
...|||..+++.+++.++..+. .+..||++.++++++ +++.++.+++++|||.++...+..++.+......
T Consensus 156 ------~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~ 228 (402)
T PRK11902 156 ------RVLGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFA 228 (402)
T ss_pred ------cccCHHHHHHHHHHHHHHHHHH-HHhcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHH
Confidence 1248999999887776655443 456777543321111 1234456788999998877665555544433333
Q ss_pred hHHHHHHHhhcccccchhhhHHhHHH-HHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHh
Q 018940 270 QAYLAFYVINDLRMGQSAKALVPAII-YICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAG 333 (348)
Q Consensus 270 ~~~~~~yl~~~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~ 333 (348)
..+.+.++.++.|++.++.+.+.... .++.+++.++.+++ ||+|+| +....+....++..+.
T Consensus 229 ~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~--~~l~~~~~~~~l~~l~ 292 (402)
T PRK11902 229 GSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY--RSLMLFGVLQAVSNLG 292 (402)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHH
Confidence 34556677777898887666554332 34567888889997 999988 6666666555555433
No 16
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.91 E-value=1.8e-21 Score=188.64 Aligned_cols=314 Identities=16% Similarity=0.102 Sum_probs=216.7
Q ss_pred CchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhc----ccCCchHHHHHHH
Q 018940 22 GRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFKIWHGAGS 97 (348)
Q Consensus 22 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~D----r~Grrr~~i~~~~ 97 (348)
+.++.+.-+...++..+.+.+..+++++|+++.|+++.+.+.+..+..+.+.+.+|+.|+++| |+|||||+++.+.
T Consensus 2 ~~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~ 81 (477)
T TIGR01301 2 PLRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGA 81 (477)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHH
Confidence 567888888889999999999999999999888999999999999999999999999999999 5999999988777
Q ss_pred HHHHHHHHHHhcCcCCCc---ccC---cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccc-hhHHHHHHH
Q 018940 98 VLVAVSFSSVFGGCMPCR---ILS---TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSR-VVLTSCRNA 170 (348)
Q Consensus 98 ~~~~i~~~~l~~~~~~~~---~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R-~~~~~~~~~ 170 (348)
+..++++.++.+ .+.. +.. ..+..+....+.+...+.+++.+..+.|+.|+++|++++++|| +.+.++.+.
T Consensus 82 ~~~~~~l~ll~~--~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~ 159 (477)
T TIGR01301 82 ALVAFAVILIGF--AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF 159 (477)
T ss_pred HHHHHHHHHHHh--CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence 777776654432 1110 000 0011111122222223566788888999999999999765444 578888888
Q ss_pred HHHHHHHHHHHHHHHH--HHhc---cCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc---------cCC
Q 018940 171 FTMVANLSLYAIAFIV--FSVS---TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL---------RGN 236 (348)
Q Consensus 171 ~~~ig~~~~~~~~~~~--~~~~---~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~---------~~~ 236 (348)
+.++|+++++.+++.. ...+ ..+..+....+.++.|++.+++.++..++..+.+||++...++ .++
T Consensus 160 ~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~ 239 (477)
T TIGR01301 160 FMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSK 239 (477)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccc
Confidence 8899988887765432 1111 1100001123789999998888888889999999996431110 011
Q ss_pred chhHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-ccccch------h----hhHHhHHHHHHHH
Q 018940 237 SHARISWAYWFKK-----ILYYQVALVYMLTRLVVNVSQAYLAFYVIND-LRMGQS------A----KALVPAIIYICSF 300 (348)
Q Consensus 237 ~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~-~~~~~~------~----~~~~~~~~~~~~i 300 (348)
.+.+..+++++++ |.++++++.++++++++..+..|...|+.++ ++-++. + ......+..+.+.
T Consensus 240 ~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~ 319 (477)
T TIGR01301 240 HGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLG 319 (477)
T ss_pred cchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 1111223333332 4578899999999999999999999888653 332211 1 1233333445556
Q ss_pred HHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhcc
Q 018940 301 IVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILP 338 (348)
Q Consensus 301 ~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~ 338 (348)
+.+++.+++ +|+|+| |+.+..+..+.+++.....+..
T Consensus 320 i~s~~l~~l~~~~g~~-k~~~~~s~~~~~~~l~~~~~i~ 357 (477)
T TIGR01301 320 ITSIGMEKLCRGWGAG-KRLWGIVNIILAICLAATVLVT 357 (477)
T ss_pred HHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHH
Confidence 777788887 999864 3778899888888888887653
No 17
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.91 E-value=2.7e-21 Score=184.69 Aligned_cols=268 Identities=13% Similarity=0.093 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
...+.+|.+.++.|.|+.+.|++.+...+...+++|+.|+++||+||||.+ +.+.+..+++...... . .+
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l-~~~~~~~~i~~~~~~~--~-------~~ 90 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA-IPGAALFIIASLLCSL--A-------ET 90 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH-HHHHHHHHHHHHHHHH--h-------Cc
Confidence 334667777777799999999999999999999999999999999998765 4676666666654331 1 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (348)
.......+ .+.+.+.+.......+++.|..+ +++|++..++.+....++..+++.+.+.+. +..+
T Consensus 91 ~~~~~~~~----~l~g~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~----------~~~g 155 (392)
T PRK10473 91 SSLFLAGR----FLQGIGAGCCYVVAFAILRDTLD-DRRRAKVLSLLNGITCIIPVLAPVLGHLIM----------LKFP 155 (392)
T ss_pred HHHHHHHH----HHHHhhhhHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hCcC
Confidence 22222222 35666666666667788888774 678999999988887777666554433322 2357
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc
Q 018940 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDL 281 (348)
Q Consensus 202 ~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~ 281 (348)
|++.+++.+++..+..++.....||++.++++ ++.+.++..++.+|||+++...+...+..........+.|.|++++.
T Consensus 156 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (392)
T PRK10473 156 WQSLFYTMAAMGILVLLLSLFILKETRPARAP-AASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQM 234 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCCCCCcccC-CccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHc
Confidence 99999988888877777777777875433221 12222334467788888766544444443444445567788888888
Q ss_pred cccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 282 RMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
|++..+.+.......++++++.++.+++ ||+|+| +.+..+..+..++.+.+.+.
T Consensus 235 g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 235 GFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR--TLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHH
Confidence 9887766655566667888888888987 999999 88888887777777665554
No 18
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=1.2e-21 Score=185.23 Aligned_cols=272 Identities=12% Similarity=-0.010 Sum_probs=173.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCc
Q 018940 33 HMLNDITAACWFTYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (348)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~ 111 (348)
.+..........++++.|+++ .|.|+.++|++.+...+...+.+|+.|+++||+||||++++.+.+..+++......
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~-- 83 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW-- 83 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh--
Confidence 444555666778999999876 49999999999999999999999999999999999998765554444444332211
Q ss_pred CCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhH--HHHHHHHHHHHHHHHHHHHHHHHHh
Q 018940 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVL--TSCRNAFTMVANLSLYAIAFIVFSV 189 (348)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~--~~~~~~~~~ig~~~~~~~~~~~~~~ 189 (348)
..+.....+.. .+.+.+.+...+...++..+..+ +++|.+. .+....+.++|..+++.+.+.+.
T Consensus 84 -------~~~~~~l~~~~----~~~g~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~-- 149 (375)
T TIGR00899 84 -------NRNYFLLLVLG----VLLSSFASTANPQLFALAREHAD-RTGREAVMFSSVMRAQISLAWVIGPPLAFWLA-- 149 (375)
T ss_pred -------cchHHHHHHHH----HHHHhhhhhhHHHHHHHHHHHhh-hcchhhHHHHHHHHHHHhHHHHHhhhHHHHHH--
Confidence 11333222222 23344444444455566666653 3445432 45555666677666554433332
Q ss_pred ccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 018940 190 STAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 269 (348)
Q Consensus 190 ~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (348)
+..+||+.+++.+++.++..++.++..||+++++++++ .+++.++.+++|+++.+....++........
T Consensus 150 --------~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
T TIGR00899 150 --------LGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL---TRLEVRGLLASRDTRLLFVACTLMWGCNILY 218 (375)
T ss_pred --------HhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc---CcchhhhhhcCcchHHHHHHHHHHHHHHHHH
Confidence 24589999998888777777766666787543222111 1223445677887766554444444444555
Q ss_pred hHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHh
Q 018940 270 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAG 333 (348)
Q Consensus 270 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~ 333 (348)
..++|.|++++.|.+..+.+..........+++.++.+++ ||+|+| +.+..+.....+....
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~--~~~~~~~~~~~~~~~~ 281 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR--RLMLLAALAGVAFYTG 281 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch--hHHHHHHHHHHHHHHH
Confidence 6788999988888887766655444444556677788887 999998 7766666555544433
No 19
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=5e-21 Score=187.71 Aligned_cols=257 Identities=10% Similarity=0.000 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
...++++.+.++.|+|..+.|++.+...+...+++++.|+++||+|||+.+. .+.+..+++...... ..+
T Consensus 54 ~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~-~~~~~~~~~~~~~~~---------~~s 123 (476)
T PLN00028 54 AAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSA-FLLMLTAPAVFCMSL---------VSS 123 (476)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH-HHHHHHHHHHHHHHH---------hcC
Confidence 4445566666667999999999999999999999999999999999998754 565565555542211 112
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (348)
.....+.+ .+.|++.+.. .+...++.+..+ +++|+++.++.+.+.++|..++..+.+.+...+.... .+...|
T Consensus 124 ~~~l~~~r----~l~G~~~~~~-~~~~~~i~~~~~-~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~-~~~~~g 196 (476)
T PLN00028 124 ATGFIAVR----FFIGFSLATF-VSCQYWMSTMFN-GKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG-APSFTA 196 (476)
T ss_pred HHHHHHHH----HHHHHHHHhh-HHHHHHHHHhcC-hhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Ccchhh
Confidence 22222222 2455555443 334456777774 5789999999887777887776666544333221100 011358
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccc--c-c-c---CCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHH
Q 018940 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRLKM--G-L-R---GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLA 274 (348)
Q Consensus 202 ~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~--~-~-~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 274 (348)
||+.+++.+++.++..++.++..++++... + + + ++++..+.+++.+++++++.+.+.+++..........++|
T Consensus 197 Wr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 276 (476)
T PLN00028 197 WRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIA 276 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHH
Confidence 999999988888777666655544422211 0 0 0 1112223456677888877766666555555566777899
Q ss_pred HHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 275 FYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 275 ~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
.|+.++.|++..+.+.+..+..++++++.++.+++ ||++||
T Consensus 277 ~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 277 EYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 99988889988777777777778899999999998 999976
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=3e-21 Score=183.10 Aligned_cols=249 Identities=9% Similarity=-0.011 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 36 NDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
+...+..+.+.+|...+|.|+|+.+.|++.+...+..++++++.|+++||+|||+.. ... ....+....... .+
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~-~~~-~~~~~~~~~~~~--~~-- 76 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL-FGS-LATFAAAAGRLL--DP-- 76 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH-HHH-HHHHHHHHHHHH--Hh--
Confidence 445555666778888778899999999999999999999999999999999988753 333 333322221111 01
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
.+.....+.+ .+.|++.+.. .+..+..+|..+ +|||+++.++.+.+..+|..+++.+.+++.
T Consensus 77 ----~~~~~l~~~R----~l~G~g~~~~-~~~~~~~~~~~~-~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~-------- 138 (368)
T TIGR00903 77 ----FNYEWLLACQ----LLAALGQPFL-LNAFAPAASQIR-EERRDLVISLLSFAMYLGIIFALAAGLKIY-------- 138 (368)
T ss_pred ----ccHHHHHHHH----HHHHhHhHHH-HHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 1333333333 3566666643 344455577775 689999999999999999988876655543
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCC-chhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHH
Q 018940 196 ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN-SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLA 274 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 274 (348)
+..|||+.+++.++++++..++.++.+||++.+++++.+ ++..+++++++|||+++.+.+.+++.....++...|+|
T Consensus 139 --~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp 216 (368)
T TIGR00903 139 --TAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLE 216 (368)
T ss_pred --HccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 246899999998888888888888888886432221111 11123578899999999888888888888999999999
Q ss_pred HHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 275 FYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 275 ~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
+|+++ .|++.+ .+....+..+.+.++ .+++ ||..||
T Consensus 217 ~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~ 253 (368)
T TIGR00903 217 AALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARA 253 (368)
T ss_pred HHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhh
Confidence 99976 567653 333333333333333 3555 666543
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=5e-21 Score=183.32 Aligned_cols=259 Identities=13% Similarity=0.010 Sum_probs=174.6
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
....-.++.+..........+.+|++.++.|.|+.+.|+..++..+...+++|+.|+++||+||||.++ .+.+..+++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~-~~~~~~~~~~ 99 (394)
T PRK10213 21 AVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVI-LFAVLLTLSC 99 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHH-HHHHHHHHHH
Confidence 334444444444444445556778877778999999999999999999999999999999999998754 5666666665
Q ss_pred HHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018940 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~ 184 (348)
..... ..+.+...+.+ .+.+++.+...+...+++.|..+ +|+|+++.+....+.++|..+++.+.+
T Consensus 100 ~~~~~---------~~~~~~l~~~r----~l~G~~~g~~~~~~~~~i~~~~~-~~~~~~a~~~~~~~~~~g~~ig~~l~~ 165 (394)
T PRK10213 100 LLVSF---------ANSFSLLLIGR----ACLGLALGGFWAMSASLTMRLVP-PRTVPKALSVIFGAVSIALVIAAPLGS 165 (394)
T ss_pred HHHHH---------HChHHHHHHHH----HHHHHhhHHHHHHHHHHHHHHcC-HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43211 12333333332 36677777777777888888884 678999999988888888777665544
Q ss_pred HHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 018940 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRL 264 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 264 (348)
.+. +..+||+.+.+.+++.+++.++.....||++.+ + ++.++..++.+|||.++...+..++...
T Consensus 166 ~l~----------~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~--~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 230 (394)
T PRK10213 166 FLG----------ELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGE--P---SHQKQNTFRLLQRPGVMAGMIAIFMSFA 230 (394)
T ss_pred HHH----------hhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcc--c---ccchhHHHHHhcCHHHHHHHHHHHHHHH
Confidence 332 245899999887776666555544455663211 1 1112234577889987776555555545
Q ss_pred HHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhh
Q 018940 265 VVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTG 313 (348)
Q Consensus 265 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g 313 (348)
......++++.++.++.|++.++.+.......++++++.++.+++ ||.+
T Consensus 231 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~ 280 (394)
T PRK10213 231 GQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV 280 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 555566677555556678887766665566667788888888887 7743
No 22
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.91 E-value=1.8e-21 Score=184.56 Aligned_cols=264 Identities=12% Similarity=0.054 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc
Q 018940 40 AACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (348)
Q Consensus 40 ~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~ 119 (348)
..+..+.+|.+.++.|+|+.++|++.++..+..++++++.|+++||+||||.+ ..+....++....... .
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-~~~~~~~~i~~~~~~~--~------- 76 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI-LGGTLVFALAAVACAL--A------- 76 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH-HHHHHHHHHHHHHHHH--H-------
Confidence 34556888888888899999999999999999999999999999999998764 5566666666543321 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchh
Q 018940 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199 (348)
Q Consensus 120 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 199 (348)
.+.....+. ..+.+++.+...++..+++.+..+ +|+|++..++.+.+..+|..+++.+.+.+. +.
T Consensus 77 ~~~~~~~~~----~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~----------~~ 141 (377)
T PRK11102 77 QTIDQLIYM----RFLHGLAAAAASVVINALMRDMFP-KEEFSRMMSFVTLVMTIAPLLAPIIGGWLL----------VW 141 (377)
T ss_pred ccHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HH
Confidence 122222222 235677777777788888999874 678999999998888888777665544333 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccccccccC--CchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 018940 200 NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG--NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYV 277 (348)
Q Consensus 200 ~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl 277 (348)
.+|++.+.+.+++.++..++..+..||+++++++++ .++..+.+++.+|||+++...+...+..........+.|.++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (377)
T PRK11102 142 FSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVY 221 (377)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 579999888877777776666667777533222111 112234566788898877666665555566666677788888
Q ss_pred hhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHH
Q 018940 278 INDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFC 330 (348)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~ 330 (348)
.+..|.+.++.+.......++.+++.++.+++ ||+|+| +.+..+..+..+.
T Consensus 222 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~--~~~~~~~~~~~~~ 273 (377)
T PRK11102 222 IELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL--NMLRFGLWIQFIM 273 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHH
Confidence 88889888777766666777888888889987 999999 7777776554443
No 23
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=1.6e-21 Score=183.52 Aligned_cols=268 Identities=12% Similarity=-0.001 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
.+..++|...++.|+|+.++|++.++..+..++++|+.|+++||+||||.++ .+..+.+++...... . .+
T Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~-~~~~~~~~~~~~~~~--~-------~~ 90 (377)
T TIGR00890 21 TWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAM-LGGILYGLGFTFYAI--A-------DS 90 (377)
T ss_pred hhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhH-HhHHHHHHHHHHHHH--H-------HH
Confidence 3345555555556999999999999999999999999999999999999865 566666666543221 1 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (348)
.....+.+ .+.+++.+.........+.+.. +|+|+++.++...+..+|..+++ |+...+. +..+
T Consensus 91 ~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~------~~~~ 154 (377)
T TIGR00890 91 LAALYLTY----GLASAGVGIAYGIALNTAVKWF--PDKRGLASGIIIGGYGLGSFILS----PLITSVI------NLEG 154 (377)
T ss_pred HHHHHHHH----HHHhHHHHHHHHhHHHHHHHHc--CcccHHHHHHHHHhcchhHhHHH----HHHHHHH------hccc
Confidence 33222222 2455555554444444555554 36799999988888777766543 3333222 2458
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccc--cCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Q 018940 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL--RGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIN 279 (348)
Q Consensus 202 ~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~ 279 (348)
||+.+++.+++.++..++.++..+|++.++++ ++.++.+...++.+|||+++...+..++..........+++.|.++
T Consensus 155 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (377)
T TIGR00890 155 VPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS 234 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999988888877777777777665432211 1111222345678888887766555555544444455667777544
Q ss_pred cccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhcc
Q 018940 280 DLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILP 338 (348)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~ 338 (348)
.+.+..+.+....+..+..+++.++.+++ ||+||| +.+..+..+.+++.+...+.+
T Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~ 291 (377)
T TIGR00890 235 -LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ--KTMSIVFGISAVGMAAMLFIP 291 (377)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHcc
Confidence 67766555555566677888899999998 999999 888888888888777666554
No 24
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=7.1e-21 Score=184.37 Aligned_cols=280 Identities=11% Similarity=0.120 Sum_probs=173.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhh----CCChhH---HHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHH
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDI----GLSPRG---AAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~----g~s~~~---~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~ 103 (348)
++.+. +..+....++..+++.+. +.+..+ .+.+.+...+...++++++|+++||+||||.+ ..+....+++
T Consensus 29 ~~~~~-~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l-~~~~~~~~~~ 106 (432)
T PRK10406 29 SGNLV-EWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM-LISVCMMCFG 106 (432)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH-HHHHHHHHHH
Confidence 34443 344444456666666553 355554 44556666677779999999999999999985 4566666666
Q ss_pred HHHHhcCcCCCcccCcccc-hhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHH
Q 018940 104 FSSVFGGCMPCRILSTSTL-KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (348)
Q Consensus 104 ~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~ 182 (348)
...... .|. .... ......+.+...+.|++.+...+...++++|..+ +++|++..+..+.+...|..++..+
T Consensus 107 ~~~~~~--~~~----~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p-~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 107 SLVIAC--LPG----YETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAV-EGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHhh--cCC----chhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCC-CCcccHHHHHHHHHHHHHHHHHHHH
Confidence 543321 231 0000 0111223333456778888777778889999885 5789999888887777777766555
Q ss_pred HHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHH-
Q 018940 183 AFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYML- 261 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 261 (348)
...+...+.+. +....|||+.|++.++++++.. +.....||++..+++ +.+.+.++++++|||+.+...+...+
T Consensus 180 ~~~~~~~~~~~--~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~ 254 (432)
T PRK10406 180 VVVLQQTLEDA--ELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQQETR--ALKEAGSLKGLWRNRRAFIMVLGFTAA 254 (432)
T ss_pred HHHHHHhCCHH--HHhccchHHHHHHHHHHHHHHH-HHHhcCCCCchHHHh--hhcccccHHHHHhhHHHHHHHHHHHHH
Confidence 33332222110 0014689999988777666543 333445664322111 11112346788899887665544433
Q ss_pred HHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHH
Q 018940 262 TRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVL 326 (348)
Q Consensus 262 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l 326 (348)
.+...+...+|+|.|+.+..|.+..+.+....+..+...++.++.+++ ||+||| +.+..+.++
T Consensus 255 ~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr--~~~~~~~~~ 318 (432)
T PRK10406 255 GSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR--TSMLCFGSL 318 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--HHHHHHHHH
Confidence 356777888999999998888887665554444455666777777887 999999 655555443
No 25
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.91 E-value=4e-21 Score=189.38 Aligned_cols=287 Identities=11% Similarity=-0.001 Sum_probs=203.8
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH
Q 018940 26 VLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~ 105 (348)
...-.++.+....-...++.-+|...+|+|.+..+.+++.+.+.+..++.+|+.|+++||+||||.+ +.+....+++..
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l-~~~~~~~~~~~~ 86 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL-MLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHH
Confidence 3555566666666666777778888888899999999999999999999999999999999999886 456666666654
Q ss_pred HHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018940 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (348)
Q Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~ 185 (348)
.... . .+.....+.+ .+.|++.+...+...+.+.+...++++|++..++......+|..+++.+++.
T Consensus 87 ~~~~--a-------~~~~~li~~r----~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~ 153 (495)
T PRK14995 87 AAAF--S-------PTASWLIATR----ALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGI 153 (495)
T ss_pred HHHH--c-------CCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3321 1 2333232322 3566777766655555565655456889999999888888887776655444
Q ss_pred HHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCc-------------------------hh-
Q 018940 186 VFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNS-------------------------HA- 239 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~-------------------------~~- 239 (348)
+. +..+|||.|++...+.++..++..+..||++.+++++.+. +.
T Consensus 154 l~----------~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 223 (495)
T PRK14995 154 LL----------EHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLW 223 (495)
T ss_pred hh----------ccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchH
Confidence 33 2458999999887777777777777777743321111000 00
Q ss_pred -----------------HHHH--------HHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHH
Q 018940 240 -----------------RISW--------AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAI 294 (348)
Q Consensus 240 -----------------~~~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 294 (348)
.... .+++|||.+....+..++......+...++|.|+++..|.++.+.+.....
T Consensus 224 ~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~ 303 (495)
T PRK14995 224 VTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLP 303 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 0000 246777776666666666666677778899999999999998888877677
Q ss_pred HHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhcc
Q 018940 295 IYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILP 338 (348)
Q Consensus 295 ~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~ 338 (348)
..++..+++++.+++ ||+|+| +.+..|+++.+++...+.+..
T Consensus 304 ~~~~~~~~~~~~g~l~~r~g~~--~~~~~g~~~~~~~~~~l~~~~ 346 (495)
T PRK14995 304 VMVASGFSGPIAGILVSRLGLR--LVATGGMALSALSFYGLAMTD 346 (495)
T ss_pred HHHHHHHHHHHHHHHHHHcCch--HHHHHHHHHHHHHHHHHHHhc
Confidence 778888899999997 999988 888888888888776665543
No 26
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.90 E-value=7.8e-21 Score=181.12 Aligned_cols=281 Identities=14% Similarity=0.080 Sum_probs=181.2
Q ss_pred CCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHH
Q 018940 21 VGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLV 100 (348)
Q Consensus 21 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~ 100 (348)
.+++......++.+.............+.+.++.|+|+.+.|++.+...+...+++|+.|+++||+||||+++ .+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~-~~~~~~ 87 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMV-TSIVLF 87 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHHH
Confidence 3344445666666666666666666777666667999999999999999999999999999999999999865 455555
Q ss_pred HHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHH
Q 018940 101 AVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (348)
Q Consensus 101 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~ 180 (348)
+++...... . .+.....+.+ .+.|++.+.......+++.|..+ +++|+++.++.+.+..+|..+++
T Consensus 88 ~~~~~~~~~--~-------~~~~~l~~~~----~l~G~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~g~~~~~ 153 (405)
T TIGR00891 88 SAGTLACGF--A-------PGYITMFIAR----LVIGIGMGGEYGSSAAYVIESWP-KHLRNKASGLLISGYAVGAVVAA 153 (405)
T ss_pred HHHHHHHHH--h-------ccHHHHHHHH----HHHHhhhhhhhHHHHHHHHHhCC-hhhhhHHHHHHHHHHHHHHHHHH
Confidence 555543321 1 1333232222 36777777777777888889885 57899999999988888888876
Q ss_pred HHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccc-ccCCchhHHHHHHHH------------
Q 018940 181 AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-LRGNSHARISWAYWF------------ 247 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~-~~~~~~~~~~~~~~~------------ 247 (348)
.+.+.+.... ..+||+.+.+.++..++ .++.....||++..++ +++++..++..++..
T Consensus 154 ~l~~~l~~~~--------~~~w~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (405)
T TIGR00891 154 QVYSLVVPVW--------GDGWRALFFISILPIIF-ALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMT 224 (405)
T ss_pred HHHHHHHHhc--------CccHHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhh
Confidence 6654443221 13599988776544443 3444455677432111 000000000000000
Q ss_pred -----Hh--HH----HHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 248 -----KK--IL----YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 248 -----~~--~~----~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
++ ++ +........+.+........++|.|+.++.|++..+.+.......++.+++.++.+++ ||+|||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~ 304 (405)
T TIGR00891 225 LAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR 304 (405)
T ss_pred hhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 00 01 1112222333334445667789999998889988777766666778889999999998 999999
Q ss_pred hhHHHHHHHHHH
Q 018940 316 LKAYYSAGGVLW 327 (348)
Q Consensus 316 ~k~~~~~g~~l~ 327 (348)
+.+..+..+.
T Consensus 305 --~~~~~~~~~~ 314 (405)
T TIGR00891 305 --KAYVCSLLAG 314 (405)
T ss_pred --hhhHHHHHHH
Confidence 7776665554
No 27
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=4.2e-21 Score=182.94 Aligned_cols=280 Identities=10% Similarity=0.035 Sum_probs=193.5
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH
Q 018940 26 VLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~ 105 (348)
...+....+..........+.+|.+.+|.|.|..+.|++.+...+..++++|+.|+++||+||||.+ ..+....+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~ 83 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL-LFLVALCVIGNA 83 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH-HHHHHHHHHHHH
Confidence 3455566677777777777888888777899999999999999999999999999999999998875 456666666654
Q ss_pred HHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018940 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (348)
Q Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~ 185 (348)
.... . .+.+...+.+ .+.|++.+.......+.+.+.. ++++|++..+....+..+|..+++.+.+.
T Consensus 84 l~~~--~-------~~~~~l~~~r----~l~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 149 (382)
T PRK10091 84 MFTL--S-------SSYLMLAIGR----LVSGFPHGAFFGVGAIVLSKII-KPGKVTAAVAGMVSGMTVANLLGIPLGTY 149 (382)
T ss_pred HHHH--h-------CcHHHHHHHH----HHHHhhhHHHHHHHHHHHHHhC-ChHHhhHHHHHHHHHHHHHHHHhccHHHH
Confidence 3321 1 2333333332 3566666655555566677776 45678888887777777776665444322
Q ss_pred HHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 018940 186 VFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLV 265 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 265 (348)
+ . +..+||+.+.+.+++.++..+..++..||+++++ +.+.++.+ +.+||++.+......++....
T Consensus 150 l----~------~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 214 (382)
T PRK10091 150 L----S------QEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEA----KGGLREQF-HFLRSPAPWLIFAATMFGNAG 214 (382)
T ss_pred H----h------hhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccc----ccCHHHHH-HHhcChHHHHHHHHHHHHHHH
Confidence 2 1 2458999999888877776666666777753211 11223333 356777666554444444444
Q ss_pred HHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 266 VNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 266 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
......|++.|+.+..|.+..+.+.+.....++.+++.++.+++ ||+|+| +....+..+.+++.+.+...
T Consensus 215 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~--~~~~~~~~~~~i~~~~~~~~ 285 (382)
T PRK10091 215 VFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL--RIAAVTDFIIVLALLMLFFF 285 (382)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch--hHHHHHHHHHHHHHHHHHHH
Confidence 55556678888888889988777777677778889999999997 999998 77777777777776555443
No 28
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.90 E-value=8e-21 Score=186.89 Aligned_cols=280 Identities=12% Similarity=0.059 Sum_probs=190.2
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhccc-----CCchHHHHHHHHHH
Q 018940 26 VLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRF-----GHFKIWHGAGSVLV 100 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~-----Grrr~~i~~~~~~~ 100 (348)
.....+..+.......+..+.++.++++.|.|..++|.+..+.... +.++++|+++||+ ||||+|++.+.+..
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~--~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAY--VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 3444444445556666777888999988899999999975444443 5899999999998 99999888777777
Q ss_pred HHHHHHH-hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHH
Q 018940 101 AVSFSSV-FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (348)
Q Consensus 101 ~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~ 179 (348)
+++...+ +. .| ..+.......+ .+.+++.+...++..++..|..+ +|||++..++...+..+|.+++
T Consensus 92 ~~~~~~~a~~--~~-----~~~l~~l~~~~----~l~~~~~a~~~i~~~a~~~~~~~-~~~rg~~~~i~~~g~~lG~llg 159 (491)
T PRK11010 92 LVAIAAMGFL--EP-----GTQLRWLAALA----VVIAFCSASQDIVFDAWKTDVLP-AEERGAGAAISVLGYRLAMLVS 159 (491)
T ss_pred HHHHHHHHHc--CC-----cchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcC-hhhhHHHHHHHHHHHHHHHHHH
Confidence 6665433 32 12 12333222222 35667777888889999999985 6789999999999888888877
Q ss_pred HHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccC--CchhHHHHHHHHHhHHHHHHHH
Q 018940 180 YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG--NSHARISWAYWFKKILYYQVAL 257 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l 257 (348)
+.+...+.. ...|||+.+++.+++.++..+..+ ..||++.++++++ +++..+++++.++++..+...+
T Consensus 160 ~~l~~~l~~---------~~~GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll 229 (491)
T PRK11010 160 GGLALWLAD---------RYLGWQGMYWLMAALLIPCIIATL-LAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILL 229 (491)
T ss_pred HHHHHHHHh---------cccCHHHHHHHHHHHHHHHHHHHH-hcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHH
Confidence 655444431 124899999988877766655444 4777543211111 1112345677787776665544
Q ss_pred HHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHh-HHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 258 VYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVP-AIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
..++..........+.+.|+.++.|++.++.+... ....++.+++.++.+++ ||+|+| +.+..+..+.+++.
T Consensus 230 ~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~--~~l~i~~~l~~l~~ 303 (491)
T PRK11010 230 LIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF--RALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHH
Confidence 44555555566677888888888899888777654 34446788999999998 999988 66655555444443
No 29
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=6.3e-21 Score=183.02 Aligned_cols=273 Identities=14% Similarity=0.095 Sum_probs=172.7
Q ss_pred CCCchHh-hHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHH
Q 018940 20 PVGRWSV-LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSV 98 (348)
Q Consensus 20 ~~~~~~~-~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~ 98 (348)
+.++++. ....++.+...........+++++++|.|.|+.++|++.+...+...+++|+.|+++||+||||.+. .+..
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~-~~~~ 86 (402)
T TIGR00897 8 KIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM-IGLL 86 (402)
T ss_pred HcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH-HHHH
Confidence 4555444 4445566666666666778899999888999999999999999999999999999999999999865 4555
Q ss_pred HHHHHHHHH-hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHH-
Q 018940 99 LVAVSFSSV-FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN- 176 (348)
Q Consensus 99 ~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~- 176 (348)
..+++.... ... .. ..+.....+.+ .+.+++.+....+..+.+.+..+ +|+|++++++.+.+.++|.
T Consensus 87 ~~~~~~~~~~~~~-~~-----~~~~~~l~~~~----~i~G~g~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~ 155 (402)
T TIGR00897 87 LWCVGHAAFIVFG-LG-----HANYPLILLFY----GIRGLGYPLFAYSFLVWVVYNTK-QDNLSSAVGWFWAVYSIGIG 155 (402)
T ss_pred HHHHHHHHHHHHh-cc-----CccHHHHHHHH----HHHHcchHHHHhHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHH
Confidence 555554321 110 00 11222222222 24566666555555666667664 6789999999888877775
Q ss_pred HHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccccc---CCchhHHHHHHHHHhHHHH
Q 018940 177 LSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR---GNSHARISWAYWFKKILYY 253 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 253 (348)
..++.+.+.+...++ .....|+..+.. .+..++.++..+|++++++++ +.++.++.++.++|||+++
T Consensus 156 ~~g~~~~~~l~~~~g-----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (402)
T TIGR00897 156 VFGSYYSSYAIPAFG-----EMNTLWSALAFV-----LTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVL 225 (402)
T ss_pred HHHHHHHHhcccccc-----hHHHHHHHHHHH-----HHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHH
Confidence 343333222221111 011124443321 122233333444432211111 1112234466788999988
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 254 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
...+..++.....++..+|.|.|+++ .|.+..+.+.......++++++.++.+++ ||+|+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 287 (402)
T TIGR00897 226 LGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM 287 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 77777777767777888899999865 78887766655555667889999999998 999988
No 30
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=6.4e-21 Score=182.97 Aligned_cols=284 Identities=12% Similarity=0.034 Sum_probs=188.5
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~ 106 (348)
....++.+.+.....+..+.++.+.++.|.|+.+.++..+...+...+.+++.|+++||+||||.+ ..+....+++...
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l-~~~~~~~~~~~~~ 94 (406)
T PRK15402 16 LCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM-LAGVAFFILTCLA 94 (406)
T ss_pred HHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHHHH
Confidence 444455555555555666677777777799999999999999999999999999999999999875 4566666665543
Q ss_pred HhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (348)
Q Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~ 186 (348)
... . .+....... ..+.+++.+.......+.+.|..+ +++|.+..+..+....++..+++.+.+.+
T Consensus 95 ~~~--~-------~~~~~l~~~----~~l~G~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 160 (406)
T PRK15402 95 ILL--A-------QSIEQFTLL----RFLQGIGLCFIGAVGYAAIQESFE-EADAIKITALMANVALLAPLLGPLVGAAL 160 (406)
T ss_pred HHH--H-------ccHHHHHHH----HHHHHhHhhhHHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 1 122222222 234556555555555667777764 56777777776666555555544443322
Q ss_pred HHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccccc-CCchhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 018940 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-GNSHARISWAYWFKKILYYQVALVYMLTRLV 265 (348)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 265 (348)
. +..+||+.+++.+++.++..+..++..||++.+++++ +.++.++.++++++||+++...+...+....
T Consensus 161 ~----------~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (406)
T PRK15402 161 I----------HVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLP 230 (406)
T ss_pred H----------HccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 2 1357999998887777766665656667754322211 1123345667889999887766655555455
Q ss_pred HHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 266 VNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 266 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
......+.|.|+.+..|.++.+.+.......++.+++.++.+++ ||+++| +.+..+.++.+++...+.+.
T Consensus 231 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~--~~~~~~~~~~~~g~~~~~~~ 301 (406)
T PRK15402 231 LLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR--SLIRMGLWPMVAGLLLAALA 301 (406)
T ss_pred HHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHH
Confidence 55566678989888888887665554444456778888888888 999998 88888877777776665543
No 31
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.90 E-value=6.7e-21 Score=184.71 Aligned_cols=248 Identities=13% Similarity=0.039 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 41 ACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 41 ~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
.....++|.+.++.|+|+.+.|++.+...+..++++++.|+++||+||||.+ ..+.+..+++...... ..
T Consensus 40 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~-~~~~~~~~~~~~~~~~---------~~ 109 (434)
T PRK11663 40 KSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM-GIGLIATGIINILFGF---------SS 109 (434)
T ss_pred hhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH-HHHHHHHHHHHHHHHH---------Hh
Confidence 3445677778777899999999999999999999999999999999999875 4566666665543211 11
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
+.......+ .+.+++.+....+..+++.+..+ +++|++..++.+.+.++|..+++.+.+.+. +..
T Consensus 110 ~~~~l~~~~----~l~g~~~g~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~----------~~~ 174 (434)
T PRK11663 110 SLWAFALLW----VLNAFFQGWGWPVCAKLLTAWYS-RTERGGWWAIWNTAHNVGGALIPLVVGAIA----------LHY 174 (434)
T ss_pred HHHHHHHHH----HHHHHHHHccchHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------Hcc
Confidence 222222222 24455555555666778888874 578999999999998888887766554443 135
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccc--c-----c-------cC----CchhHHHHH-HHHHhHHHHHHHHHHHH
Q 018940 201 QYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM--G-----L-------RG----NSHARISWA-YWFKKILYYQVALVYML 261 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~--~-----~-------~~----~~~~~~~~~-~~~~~~~~~~~~l~~~~ 261 (348)
+||+.+++.+++.++..++.++..||++.+. + + ++ +.+.++.++ ..++||.++.+.+..++
T Consensus 175 gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (434)
T PRK11663 175 GWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVL 254 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHH
Confidence 8999998887777666655555666643211 0 0 00 001112222 25667877776666666
Q ss_pred HHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhh
Q 018940 262 TRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTG 313 (348)
Q Consensus 262 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g 313 (348)
..........|+|.|+.++.|++..+.+....+..++++++.++.+++ ||+.
T Consensus 255 ~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~ 307 (434)
T PRK11663 255 VYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLF 307 (434)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 666667788899999988889988776666666778889999999998 9984
No 32
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.90 E-value=1.5e-20 Score=181.17 Aligned_cols=259 Identities=10% Similarity=-0.024 Sum_probs=176.6
Q ss_pred HHHHHHHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 37 DITAACWFTYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~-~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
+..+-....+..+.+++ .|+|..+.|++.++..+..++++++.|+++||+||||.+ ..+.+...+....... .
T Consensus 20 ~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~-~~~~~~~~~~~~~~~~--~--- 93 (412)
T TIGR02332 20 SFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI-AGIMVLWGIASTATMF--A--- 93 (412)
T ss_pred HHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH-HHHHHHHHHHHHHHHH--h---
Confidence 33333333444445544 599999999999999999999999999999999999875 4566666665543321 1
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
.+.......+ .+.|++.+...+...+++.|..+ +++|++..++.+.+..+|..+++.+.+.+...-..
T Consensus 94 ----~~~~~l~~~r----~l~G~~~~~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--- 161 (412)
T TIGR02332 94 ----TGPESLYLLR----ILVGIAEAGFLPGILLYLTFWFP-AYFRARANALFMIAMPVTMALGLILSGYILALDGL--- 161 (412)
T ss_pred ----cCHHHHHHHH----HHHHHHHhhHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---
Confidence 1333233333 36677777766666677888874 57899999999988888888877765554421000
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----cc----------------CC----c---hhHHHHHHHH
Q 018940 196 ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-----LR----------------GN----S---HARISWAYWF 247 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~-----~~----------------~~----~---~~~~~~~~~~ 247 (348)
.+..|||+.+++.++++++..++.++++||++.+++ ++ ++ + ..+..+++++
T Consensus 162 -~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T TIGR02332 162 -MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF 240 (412)
T ss_pred -CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc
Confidence 013589999999888887777777777887542210 00 00 0 0011233333
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-ccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 248 KKILYYQVALVYMLTRLVVNVSQAYLAFYVIND-LRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~-~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
+|.++...+.+++.....++..+|+|.|+++. .+.+..+.+.+.....++++++.++.+++ ||+++|
T Consensus 241 -~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r 309 (412)
T TIGR02332 241 -TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER 309 (412)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc
Confidence 46666677777777778888899999999873 46665555666666778899999999998 999977
No 33
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.89 E-value=5.3e-22 Score=194.17 Aligned_cols=263 Identities=12% Similarity=0.029 Sum_probs=178.2
Q ss_pred HHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchh
Q 018940 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (348)
Q Consensus 45 ~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 124 (348)
..+|...+|+|+|+.+.|++.+.+.+..++++|+.|+++||+||||.+. .+.+..++.....-. .++.. ..+...
T Consensus 50 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~-~~~~~~~~~~~~~~~--~~~~~--~~~~~~ 124 (467)
T PRK09556 50 AAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLP-FLLILSAICMLGFGA--SLGSG--SVSLGL 124 (467)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHH-HHHHHHHHHHHHHHH--HHhcc--cchHHH
Confidence 4456666667999999999999999999999999999999999998753 444444444322110 11110 123332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHH
Q 018940 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRW 204 (348)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 204 (348)
..+.+ .+.|++.+...++..+++++..+ +++|+++.++.+.+.++|.++++.+...+..... ..+|+.
T Consensus 125 l~~~r----~l~G~~~~~~~~~~~~~i~~~~~-~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~-------~~~~~~ 192 (467)
T PRK09556 125 MIALW----ALSGFFQSTGGPCSYSTITRWTP-RRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF-------DGHVIG 192 (467)
T ss_pred HHHHH----HHHHHHHhccchHHHHHHHHHcC-ccceeeeEEeeecccchhhhHHHHHHHHHHHhhc-------cCcchh
Confidence 32222 35667777666677788888885 5789999999888888888887665433332211 125888
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccc-----c-----c---cC----Cc--hhHHHH-HHHHHhHHHHHHHHHHHHHHH
Q 018940 205 IAYSSIFIGCCFVGIFLSRTEEPRLKM-----G-----L---RG----NS--HARISW-AYWFKKILYYQVALVYMLTRL 264 (348)
Q Consensus 205 ~~~i~~~i~~~~~ll~~~~~~e~~~~~-----~-----~---~~----~~--~~~~~~-~~~~~~~~~~~~~l~~~~~~~ 264 (348)
.+.+.++++++..++.++..+|++++. + + ++ ++ +.++.+ ++.+|||.++...+..++...
T Consensus 193 ~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 272 (467)
T PRK09556 193 MFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYI 272 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 887777777777666666655432110 0 0 00 00 111222 337889998888888877777
Q ss_pred HHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHH
Q 018940 265 VVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVL 326 (348)
Q Consensus 265 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l 326 (348)
..++...|.|.|+++..|++..+.+.......++++++.++.+++ ||+|+| +....+..+
T Consensus 273 ~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r--~~~~~~~~~ 333 (467)
T PRK09556 273 VRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR--RALVACIAL 333 (467)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--chHHHHHHH
Confidence 777888999999999999988777766666777889999999998 999988 554444333
No 34
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.89 E-value=1.9e-20 Score=179.27 Aligned_cols=294 Identities=10% Similarity=0.025 Sum_probs=184.2
Q ss_pred CCCCCCCCchHhh-HHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhH-----HHHHHHHHHHHHHhhhhhhHhhhcccCC
Q 018940 15 DSFTQPVGRWSVL-YYGSGHMLNDITAACWFTYLLLFLTDIGLSPRG-----AAAVMLSGQIADGFATIFIGELIDRFGH 88 (348)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~-----~g~i~~~~~i~~~i~~p~~G~l~Dr~Gr 88 (348)
+++.++.++++.+ ...++.+..........+++|.|+++.|++..+ .|.+.++..+.+.+.+|+.|+++||+||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 83 (408)
T PRK09874 4 CENDTPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGR 83 (408)
T ss_pred CcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCc
Confidence 3334555555543 334667777777778889999999888887543 5899999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHH
Q 018940 89 FKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCR 168 (348)
Q Consensus 89 rr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~ 168 (348)
||.++ .+.+..+++...... ..+.....+.+ .+.+++.+. .....+.+.+.. ++++|++..+..
T Consensus 84 r~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~----~~~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~ 147 (408)
T PRK09874 84 KIMLL-RSALGMGIVMVLMGL---------AQNIWQFLILR----ALLGLLGGF-VPNANALIATQV-PRNKSGWALGTL 147 (408)
T ss_pred HHHHH-HHHHHHHHHHHHHHH---------HhhHHHHHHHH----HHHHHhhhh-HHhHHHHHHHhc-CHhhhhHHHHHH
Confidence 98764 566666665543321 11233222222 244444333 344456666766 457889998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHH
Q 018940 169 NAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFK 248 (348)
Q Consensus 169 ~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 248 (348)
+.+..+|..+++.+.+.+. +..+|++.+.+.+++.++..++..+..||++.+.+++++.+.++. .+.+|
T Consensus 148 ~~~~~~g~~~~~~~~~~l~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 216 (408)
T PRK09874 148 STGGVSGALLGPLAGGLLA----------DSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHMREV-VTSLK 216 (408)
T ss_pred HHHHHHHHHHHHHHHHHHH----------HHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhHHHHH-HHhCc
Confidence 8877777776655544332 245799998888777777666666677775322221111222222 34566
Q ss_pred hHHHHH-HHHHHHHHHHHHHhhhHHHHHHHhhcccccch---hhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHH
Q 018940 249 KILYYQ-VALVYMLTRLVVNVSQAYLAFYVINDLRMGQS---AKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAG 323 (348)
Q Consensus 249 ~~~~~~-~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~---~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g 323 (348)
|++++. ......+.+........+++.|..+..+.... ..+.+..+..++++++.+..+++ ||+||| +.+..+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~--~~~~~~ 294 (408)
T PRK09874 217 NPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE--KILITA 294 (408)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--hhHHHH
Confidence 776544 33333334455556677888888875443221 12333334445666777777887 999999 877777
Q ss_pred HHHHHHHHHhHhhc
Q 018940 324 GVLWVFCGAGILIL 337 (348)
Q Consensus 324 ~~l~~v~~~~~~~~ 337 (348)
..+..++.+...+.
T Consensus 295 ~~~~~~~~~~~~~~ 308 (408)
T PRK09874 295 LIFSVLLLIPMSFV 308 (408)
T ss_pred HHHHHHHHHHHHHh
Confidence 77666666544443
No 35
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.89 E-value=7.2e-21 Score=179.76 Aligned_cols=246 Identities=15% Similarity=0.095 Sum_probs=178.4
Q ss_pred HHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchh
Q 018940 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (348)
Q Consensus 45 ~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 124 (348)
...|.+.++.|.|+.+.|++.++..+...+.+++.|+++||+||||.++ .+.+..+++...... . .+...
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~-~~~~~~~~~~~~~~~--~-------~~~~~ 84 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLA-VFIVIWGVFTGLQAF--A-------GAYVS 84 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeH-HHHHHHHHHHHHHHH--H-------cCHHH
Confidence 3344444445999999999999999999999999999999999998864 566555555543321 1 12332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHH
Q 018940 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRW 204 (348)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 204 (348)
..+. ..+.+++.+...++..+++.|..+ +|+|++..++.+....+|..+++.+.+.+. ...+|++
T Consensus 85 ~~~~----~~l~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~----------~~~~~~~ 149 (399)
T TIGR00893 85 LYIL----RVLLGAAEAPFFPGIILIVASWFP-ASERATAVSIFNSAQGLGGIIGGPLVGWIL----------IHFSWQW 149 (399)
T ss_pred HHHH----HHHHHHHHHhhhhHHHHHHHHhCC-HHHHHHHHHHHHHhchHHHHHHHHHHHHHH----------HhCCchH
Confidence 2222 236777777777788889999874 678999999999888888888766554433 2457999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccc----c-c---------------CCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 018940 205 IAYSSIFIGCCFVGIFLSRTEEPRLKMG----L-R---------------GNSHARISWAYWFKKILYYQVALVYMLTRL 264 (348)
Q Consensus 205 ~~~i~~~i~~~~~ll~~~~~~e~~~~~~----~-~---------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 264 (348)
.+.+.+++.++..++..+..||++.+++ + + ++++.++..++.+|||+++...+..++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
T TIGR00893 150 AFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNI 229 (399)
T ss_pred HHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHh
Confidence 9988877777776666666666432110 0 0 000112235678889998887777777778
Q ss_pred HHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 265 VVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 265 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
.......++|.|+++..|.+..+.+.......++++++.++.+++ ||++||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 281 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRR 281 (399)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 888889999999999889887777766666777888999999997 999998
No 36
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.89 E-value=5.7e-20 Score=178.99 Aligned_cols=301 Identities=13% Similarity=0.098 Sum_probs=224.6
Q ss_pred chHhhHHhhhhhHHHHHHH-HHHHHHHHHHHhh----CCC--------------------------hhHHHHHHHHHHHH
Q 018940 23 RWSVLYYGSGHMLNDITAA-CWFTYLLLFLTDI----GLS--------------------------PRGAAAVMLSGQIA 71 (348)
Q Consensus 23 ~~~~~~~~~g~~~~~~~~~-~~~~~l~~~~~~~----g~s--------------------------~~~~g~i~~~~~i~ 71 (348)
.|+..+|.+.+++++.... ++..+.|+|++++ |.+ .+..+...+++.+.
T Consensus 3 r~~i~~W~lyd~ans~f~~~i~t~~~p~~~~~~a~~~g~~~~~~~~~c~~~~~~c~~~~~g~~~~~~s~~~~~~sis~l~ 82 (477)
T PF11700_consen 3 RREIWSWALYDWANSPFATVIVTFFFPPYFQSLAREAGVLPGDPTQPCSDSDDDCVVPFFGSWIDTSSLWLYANSISGLL 82 (477)
T ss_pred hhHHHHHHHhHhhcccchhhhHHHHHHHHHHHHHHhcccccccccCcccccCCccccccccccccHhHHHHHHHHHHHHH
Confidence 5678999999999887554 4456778888874 211 23457889999999
Q ss_pred HHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhh
Q 018940 72 DGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMV 151 (348)
Q Consensus 72 ~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~ 151 (348)
.++..|+.|.++|+.|+||+++...+.+.+++...++. ++ ..+.....+.+ ++..+++....+.++++.
T Consensus 83 ~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~--v~-----~~~~~~~~~l~----iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 83 QALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWF--VS-----PGQWWLALVLF----IIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH--hC-----cchHHHHHHHH----HHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988777777777665543 11 12222222222 356688888999999999
Q ss_pred hhcccCccc-------------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHH
Q 018940 152 NCITLNSTS-------------------------RVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIA 206 (348)
Q Consensus 152 ~~~~~~~~~-------------------------R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 206 (348)
+++++++++ |++.++.....+++|+++...+...++...... .+.....|..+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~--~~~~~~~r~~~ 229 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST--ASNTWAIRVAF 229 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--cccchhhhHHH
Confidence 999975443 289999999999999888776654544332211 11245678889
Q ss_pred HHHHHHHHHHHHHHHhhccccccccc-ccCC-------chhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Q 018940 207 YSSIFIGCCFVGIFLSRTEEPRLKMG-LRGN-------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVI 278 (348)
Q Consensus 207 ~i~~~i~~~~~ll~~~~~~e~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~ 278 (348)
.+.++..++..+..++++||++.+++ ++.+ ++.++.+|++.|+|+..+..+.+++.+-+.++.......|..
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~ 309 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYAT 309 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999754222 1111 233445667777788777888888888999999999999999
Q ss_pred hcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhh
Q 018940 279 NDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILI 336 (348)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~ 336 (348)
+.+|++..+...+.++..+.+++|+++.+++ ||+|.|.|+++..+++++.+.++.-++
T Consensus 310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~ 368 (477)
T PF11700_consen 310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLF 368 (477)
T ss_pred HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999887777788889999999999998 999988788888888887555544443
No 37
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.89 E-value=4.3e-20 Score=177.00 Aligned_cols=277 Identities=13% Similarity=0.054 Sum_probs=180.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCc
Q 018940 32 GHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (348)
Q Consensus 32 g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~ 111 (348)
..+.............|.+.++.|.|+.+.|++.+...+...+++++.|+++||+||||.+. .+.....+.......
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~~-- 99 (406)
T PRK11551 23 VALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILI-VSVALFGLFSLATAQ-- 99 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH-HHHHHHHHHHHHHHH--
Confidence 34444444445556666676677999999999999999999999999999999999999865 455555554432221
Q ss_pred CCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 018940 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (348)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~ 191 (348)
. .+.....+.+ .+.+++.+...+...+++.|..+ +|+|++..++.+.+..+|..+++.+...+ .
T Consensus 100 ~-------~~~~~~~~~~----~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~----~ 163 (406)
T PRK11551 100 A-------WDFPSLLVAR----LLTGVGLGGALPNLIALTSEAVG-PRLRGTAVSLMYCGVPFGGALASVIGVLA----A 163 (406)
T ss_pred h-------ccHHHHHHHH----HHHHhhHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----c
Confidence 1 1333232222 35677777777777888888874 57899999998888888877765443221 1
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccC-CchhHHHHHHHHHhH---HHHHHHHHHHHHHHHHH
Q 018940 192 AKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG-NSHARISWAYWFKKI---LYYQVALVYMLTRLVVN 267 (348)
Q Consensus 192 ~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~ 267 (348)
+..+|++.+++.+++.++..++...+.||++.+.++++ +++.++..+..++++ ..+.+....++.....+
T Consensus 164 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (406)
T PRK11551 164 ------GDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLY 237 (406)
T ss_pred ------cccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 24579998888776666666666666787543222111 111112223334332 22233333444445556
Q ss_pred hhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhh
Q 018940 268 VSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILI 336 (348)
Q Consensus 268 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~ 336 (348)
....|+|.|+++ .|.+..+.+.......++.+++.++.+++ ||+|+| +.+..+.+...++.+.+.+
T Consensus 238 ~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 238 FLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR--RVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHh
Confidence 677789999876 58877766666666777889999999998 999998 7766666655555544443
No 38
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.89 E-value=5.7e-20 Score=177.23 Aligned_cols=306 Identities=7% Similarity=-0.053 Sum_probs=194.3
Q ss_pred cccCCCCCC---CCCCCCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHH-hhCCChhHHHHHHHHHHHHHHhhhhhhHhh
Q 018940 7 MNYDIENDD---SFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLT-DIGLSPRGAAAVMLSGQIADGFATIFIGEL 82 (348)
Q Consensus 7 ~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~-~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l 82 (348)
.+.|-||.+ +.-|++-++....=.++.......+.+..+..+..-+ ++|+|++|.+++.++..+..++.+.+.|++
T Consensus 14 ~~w~pe~~~~w~~~~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l 93 (462)
T PRK15034 14 RDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFM 93 (462)
T ss_pred cCCCCCChHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666652 2222333333333233333444455565555555544 469999999999999999999999999999
Q ss_pred hcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccch
Q 018940 83 IDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRV 162 (348)
Q Consensus 83 ~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~ 162 (348)
+||+|.||.+. .+.+..++....... ..+ ....++....+.+ .+.|++ +....+....+++..+ +++|+
T Consensus 94 ~Dr~G~R~v~~-~~~ll~~i~~~~~~~-a~~---~~~~s~~~lli~r----~l~Gig-g~~f~~~~~~vs~wfp-~~~rG 162 (462)
T PRK15034 94 VPIFGGRRWTV-FSTAILIIPCVWLGI-AVQ---NPNTPFGIFIVIA----LLCGFA-GANFASSMGNISFFFP-KAKQG 162 (462)
T ss_pred HHHhCChHHHH-HHHHHHHHHHHHHHH-HHc---ccCCCHHHHHHHH----HHHHHH-HHhHHHHHHHHHHHCC-HhHhH
Confidence 99999998764 455555555433221 000 0012333332322 356665 4455667777888774 67899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-----hccCCc-c--cchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q 018940 163 VLTSCRNAFTMVANLSLYAIAFIVFS-----VSTAKT-H--ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR 234 (348)
Q Consensus 163 ~~~~~~~~~~~ig~~~~~~~~~~~~~-----~~~~~~-~--~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~ 234 (348)
++.++....+++|..+...+.++++. .++... . .+...+|+....++.++.++..++.++..+|++.
T Consensus 163 ~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~----- 237 (462)
T PRK15034 163 SALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS----- 237 (462)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-----
Confidence 99999877778888777777655442 222110 0 0124578888888877777777777766555321
Q ss_pred CCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhh
Q 018940 235 GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTG 313 (348)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g 313 (348)
++.+. +..++.+|||+.|.+++.+++....+.+...|+|.|+++..+-. .......+..+...+..+++|++ ||+|
T Consensus 238 ~~~~~-~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~--~~l~~~~l~~l~~~l~rplgG~LADRiG 314 (462)
T PRK15034 238 SRASI-ADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDV--NILRLAFFGPFIGAIARSVGGAISDKFG 314 (462)
T ss_pred cccCH-HHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChH--HHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 12222 34467999999999999999988888888889999988865321 11111122234556666888998 9999
Q ss_pred hhhhHHHHHHHHHHHHHHHh
Q 018940 314 QRLKAYYSAGGVLWVFCGAG 333 (348)
Q Consensus 314 ~r~k~~~~~g~~l~~v~~~~ 333 (348)
+| |+..++.++.+++...
T Consensus 315 ~~--~vl~~~~i~~~i~~~~ 332 (462)
T PRK15034 315 GV--RVTLINFIFMAIFSAL 332 (462)
T ss_pred ch--HHHHHHHHHHHHHHHH
Confidence 99 8888887766666543
No 39
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.89 E-value=3.7e-21 Score=179.76 Aligned_cols=278 Identities=18% Similarity=0.176 Sum_probs=185.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCc
Q 018940 33 HMLNDITAACWFTYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (348)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~ 111 (348)
.+..........+.++.++.+ .|.|+.++|++.++..+...+.+++.|+++||+||||. +..+.+..+++......
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-l~~~~~~~~~~~~~~~~-- 81 (352)
T PF07690_consen 5 FFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRV-LIIGLLLFALGSLLLAF-- 81 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHH-HHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeee-EeehhhhhhhHHHHhhh--
Confidence 344455555666777745544 59999999999999999999999999999999999985 55677777777332221
Q ss_pred CCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 018940 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (348)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~ 191 (348)
. .+.+.. .+...+.+++.+.......+++.|..+ +|||++..+..+....+|..+++.+++ .+.
T Consensus 82 -----~--~~~~~~----~~~~~l~g~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~~----~l~ 145 (352)
T PF07690_consen 82 -----A--SNFWLL----LIARFLLGIGSGFFSPASNALIADWFP-PEERGRAFGILSAGFSLGSILGPLLGG----FLI 145 (352)
T ss_dssp -----H--CCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHCCC-TCCHHHHHHHHHHHHHHHHHHHHHHHH----HCC
T ss_pred -----h--hhHHHH----hhhccccccccccccccccccccccch-hhhhhhccccccchhhhhhhcccchhh----hhh
Confidence 0 122222 222236778878888888899999885 479999999999988888877654432 222
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-cCCch---hH----HHHHHHHHhHHHHHHHHHHHHHH
Q 018940 192 AKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL-RGNSH---AR----ISWAYWFKKILYYQVALVYMLTR 263 (348)
Q Consensus 192 ~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~-~~~~~---~~----~~~~~~~~~~~~~~~~l~~~~~~ 263 (348)
+..+||+.+++.+++.++..++...+.+|++.++++ +++++ .+ +.++..+++|.++......++..
T Consensus 146 ------~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
T PF07690_consen 146 ------SYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFF 219 (352)
T ss_dssp ------CHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHH
T ss_pred ------hccccccccccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHH
Confidence 256799999988888887776544555543332221 11111 11 12567777777653444444444
Q ss_pred HHHHhhhHHHHHHHhhccccc-chhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 264 LVVNVSQAYLAFYVINDLRMG-QSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 264 ~~~~~~~~~~~~yl~~~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
........+.|.|+.+..|.+ ..+.+....+..+.++++.++.+++ ||+++| +..........++...+.+.
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 293 (352)
T PF07690_consen 220 FVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR--RRLLIAILLLILGALGLLLL 293 (352)
T ss_dssp HHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHHHHHHHH
Confidence 566778889999989999998 5666655566667777788888887 999987 55555555555555444443
No 40
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.89 E-value=4.6e-20 Score=177.55 Aligned_cols=289 Identities=10% Similarity=-0.042 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 36 NDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
..+...+..+.+|.+.++.|+|+.+.|++.+...+...+++++.|+++||+||||.. ..+..+.+++...... .+
T Consensus 15 ~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~-~~g~~l~~~g~~l~~~--~~-- 89 (410)
T TIGR00885 15 WGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI-LLGLFLYALGAFLFWP--AA-- 89 (410)
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-HHHHHHHHHHHHHHHH--HH--
Confidence 334445556777777666799999999999999999999999999999999999875 5677777777644321 01
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT- 194 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~- 194 (348)
...+.... .+...+.+.|.+..+.+.++++.+..+ +++|++..++.+...++|..+++.+..++........
T Consensus 90 --~~~~~~~~----l~~~~l~G~g~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 90 --EIMNYTLF----LVGLFILTAGLGFLETAANPYILVMGP-ESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred --hhccHHHH----HHHHHHHHhhHHHHHhhhhHHHHHHCC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 01123222 222246788888888888888888764 5678888899899999999888877766653211000
Q ss_pred ---------------ccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHH
Q 018940 195 ---------------HADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVY 259 (348)
Q Consensus 195 ---------------~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (348)
...+..+||+.+.+.+++.++..++.. ..++++.+++++++++.++..++++|||+++...+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKMPALNHSDAKQISFSASLSRLARIRHYREGVIAQ 241 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCccccccccchhhHHHHHhChhHHHHHHHH
Confidence 000235799999888776666544432 3333322211112222334556788999987766666
Q ss_pred HHHHHHHHhhhHHHHHHHhhcc-cccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 260 MLTRLVVNVSQAYLAFYVINDL-RMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 260 ~~~~~~~~~~~~~~~~yl~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
++......+..+|++.|.+++. +.+....+.+.........+|.++.+++ ||+++| +.+.++..+.++.+++..+.
T Consensus 242 f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~--~~l~i~~~~~~~~~ll~~~~ 319 (410)
T TIGR00885 242 FFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH--KVLMAYAIIGMALCLGSIFA 319 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHc
Confidence 6655555567789999997643 3332222223333345667888888887 999999 88888888888877777665
Q ss_pred cC
Q 018940 338 PM 339 (348)
Q Consensus 338 ~~ 339 (348)
+.
T Consensus 320 ~~ 321 (410)
T TIGR00885 320 GG 321 (410)
T ss_pred CC
Confidence 54
No 41
>PRK10504 putative transporter; Provisional
Probab=99.89 E-value=3.2e-20 Score=181.55 Aligned_cols=287 Identities=15% Similarity=0.073 Sum_probs=196.9
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
......++.+........+.+.+|.+.++.|.|+.+.|++.+...+..++++|+.|+++||+||||.++ .+....+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~-~~~~~~~~~~ 89 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFF-TAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH-HHHHHHHHHH
Confidence 444555666666666677788889998888999999999999999999999999999999999998865 4555555554
Q ss_pred HHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018940 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~ 184 (348)
..... . .+.....+. ..+.+++.+...+...+.+.+..+ +++|++..++.+...++|..+++.+.+
T Consensus 90 ~~~~~---~------~~~~~l~~~----~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~g 155 (471)
T PRK10504 90 LFCAL---S------GTLNELLLA----RVLQGVGGAMMVPVGRLTVMKIVP-REQYMAAMTFVTLPGQVGPLLGPALGG 155 (471)
T ss_pred HHHHH---h------CCHHHHHHH----HHHHHhhhHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 33221 1 122222222 236777777776677777888774 578888888888777777777655544
Q ss_pred HHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-c-------------------C-C-------
Q 018940 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL-R-------------------G-N------- 236 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~-~-------------------~-~------- 236 (348)
.+. +..+||+.+.+......+..++.....||.+.++++ + + +
T Consensus 156 ~l~----------~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
T PRK10504 156 LLV----------EYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPL 225 (471)
T ss_pred HHH----------hhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchH
Confidence 443 135899999887666666666655555543211110 0 0 0
Q ss_pred -----------------------chhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhH
Q 018940 237 -----------------------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPA 293 (348)
Q Consensus 237 -----------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 293 (348)
++++.+ .+++|||+++...+..++.+........+.|.|++...|.++...++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 304 (471)
T PRK10504 226 AIAGLVAVGVVALLLYLLHARNNNRALFS-LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMI 304 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccC-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 000112 24788999887777777776776666778888888878888776665555
Q ss_pred HHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhccC
Q 018940 294 IIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILPM 339 (348)
Q Consensus 294 ~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~~ 339 (348)
...++.+++.++.+++ ||+||| +.+..+.++.+++..++.+.+.
T Consensus 305 ~~~~~~~~~~~~~~~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
T PRK10504 305 PMVLGSMGMKRIVVQVVNRFGYR--RVLVATTLGLALVSLLFMLVAL 349 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHcCch--HHHHHHHHHHHHHHHHHHhccc
Confidence 5555666676778887 999999 8888888878877776666543
No 42
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=9.2e-21 Score=185.66 Aligned_cols=280 Identities=15% Similarity=0.058 Sum_probs=199.4
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHh
Q 018940 29 YGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVF 108 (348)
Q Consensus 29 ~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~ 108 (348)
..++.+............+|.+.++.|.|+.+.|++.+...+..+++.|+.|+++||+||||.++ .+....+++.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~ 85 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFL-ISTFAFTLGSLLCG 85 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHH-HHHHHHHHHHHHHh
Confidence 34455555555566667778777778999999999999999999999999999999999998764 56666666654332
Q ss_pred cCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 109 GGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
. ..+.....+. ..+.|++.+...+...+++.|..+ +++|++..++.+.+..+|..+++.+.+.+.
T Consensus 86 ~---------~~~~~~l~~~----~~~~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~- 150 (485)
T TIGR00711 86 V---------APNLELMIIF----RVIQGFGGGPLIPLSFSTLLNIYP-PEKRGRAMAIWGLTVLVAPALGPTLGGWII- 150 (485)
T ss_pred C---------cCCHHHHHHH----HHHHHhhhhhHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHhhhhhccHhHhc-
Confidence 1 1233322222 235677777777778888999885 678999999888888888777655543332
Q ss_pred hccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccccc-----------------------CCc---hh---
Q 018940 189 VSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-----------------------GNS---HA--- 239 (348)
Q Consensus 189 ~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~-----------------------~~~---~~--- 239 (348)
+..+||+.+++.++++++..++..+..||++.++.++ ++. +.
T Consensus 151 ---------~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (485)
T TIGR00711 151 ---------ENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEI 221 (485)
T ss_pred ---------cCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 2468999998887777777666666666643211100 000 00
Q ss_pred ---------------------HHH--HHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHH
Q 018940 240 ---------------------RIS--WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIY 296 (348)
Q Consensus 240 ---------------------~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 296 (348)
+++ -.+.+|||+++...+..++..........++|.|+++..|.++.+.+.......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~ 301 (485)
T TIGR00711 222 LILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVG 301 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 000 024677777776666666666777777889999999999998877777666677
Q ss_pred HHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHh
Q 018940 297 ICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGIL 335 (348)
Q Consensus 297 ~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~ 335 (348)
++.+++.++.+++ ||+|+| +.+..+..+.+++...+.
T Consensus 302 ~~~~~~~~~~g~l~~r~~~~--~~~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 302 LAPMLSSPIAGRMGDKIDPR--KLVTIGLILYAVGFYWRA 339 (485)
T ss_pred HHHHHHHHHHHHHHhhcCcH--HHHHHHHHHHHHHHHHHh
Confidence 7888999999998 999999 888888888888887666
No 43
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=9.4e-22 Score=182.26 Aligned_cols=271 Identities=14% Similarity=0.014 Sum_probs=199.1
Q ss_pred HHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchh
Q 018940 46 YLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (348)
Q Consensus 46 ~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 124 (348)
+..+++.+. |+|.+|+|.+.+...+.+.+++.+.|.++||.+.|+. +..|.++.++..+++-+ + .+..
T Consensus 50 ~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~f-m~~gLilsai~nil~Gf-------s--~s~~- 118 (448)
T COG2271 50 LAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYF-MAFGLILSAIVNILFGF-------S--PSLF- 118 (448)
T ss_pred hccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcee-ehHHHHHHHHHHHHHhh-------h--hHHH-
Confidence 334555454 7999999999999999999999999999999999875 56788888877754321 1 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHH
Q 018940 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRW 204 (348)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 204 (348)
. +.++..+-+...+...+|+...+....+ ++|||+.-++.+...++|+.+.+.+... +.+. ...+||.
T Consensus 119 ~---~~~l~~lng~fQg~Gwpp~~~~i~~Wfs-r~eRG~~~siWn~shNiGGal~~~~~~l--a~~~------~~~~w~~ 186 (448)
T COG2271 119 L---FAVLWVLNGWFQGMGWPPCARTITHWFS-RKERGTWWSIWNTSHNIGGALAPLVALL--AFFA------FHGGWRA 186 (448)
T ss_pred H---HHHHHHHHHHHhcCCCcHHHHHHHHHcC-ccccCceEEEehhhhhcccchHHHHHHH--HHHH------hccchhH
Confidence 2 2222335667778888888889988885 6899999999999999998876554311 3322 1348999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccc------------cc-CCch------hHH-HHHHHHHhHHHHHHHHHHHHHHH
Q 018940 205 IAYSSIFIGCCFVGIFLSRTEEPRLKMG------------LR-GNSH------ARI-SWAYWFKKILYYQVALVYMLTRL 264 (348)
Q Consensus 205 ~~~i~~~i~~~~~ll~~~~~~e~~~~~~------------~~-~~~~------~~~-~~~~~~~~~~~~~~~l~~~~~~~ 264 (348)
.|++.++++++..++.++..+|++.... +. ++++ .++ -++.+++||..|.+++.+++...
T Consensus 187 ~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYi 266 (448)
T COG2271 187 AFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYV 266 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 9999999999999999998888643210 00 1111 122 24678999999999999999989
Q ss_pred HHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhh--hhhhHHHHHHHHHHHHHHHhHhhccCC
Q 018940 265 VVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTG--QRLKAYYSAGGVLWVFCGAGILILPMN 340 (348)
Q Consensus 265 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g--~r~k~~~~~g~~l~~v~~~~~~~~~~~ 340 (348)
..++..-|-|.|+.|..|++...+.......-.+++.|+++.||+ ||+- || ..+-.+.+++..++.+...+.|.+
T Consensus 267 vR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR-~p~~~i~~~~i~~~~~~~w~~~~~ 344 (448)
T COG2271 267 VRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRR-GPMALIFMLLITASLVLYWLAPNG 344 (448)
T ss_pred HHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccc-chHHHHHHHHHHHHHHHHHcCCCc
Confidence 999999999999999999998766666667788999999999998 9854 44 334444455555555554444544
No 44
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.89 E-value=3.2e-20 Score=180.90 Aligned_cols=247 Identities=14% Similarity=0.060 Sum_probs=163.3
Q ss_pred HHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHH
Q 018940 47 LLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVET 126 (348)
Q Consensus 47 l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 126 (348)
..+++.+.|+|+.+.|++.+...+..++++|+.|+++||+||||.+ +.+.+..++....... .+. ...+.....
T Consensus 51 ~~p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l-~~~~~~~~i~~~~~~~--~~~---~~~~~~~~~ 124 (452)
T PRK11273 51 AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL-PAGLILAAAVMLFMGF--VPW---ATSSIAVMF 124 (452)
T ss_pred hhHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH-HHHHHHHHHHHHHHHh--hhc---ccccHHHHH
Confidence 3345544499999999999999999999999999999999999875 4566666665543321 110 011222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCcccchhhHHHHH
Q 018940 127 ISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS-VSTAKTHADLENQYRWI 205 (348)
Q Consensus 127 ~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~ 205 (348)
+.+ .+.+++.+....+..+.+.+..+ +++|++..++.+.+.++|+.+.+ |+.. ... ...+||+.
T Consensus 125 ~~~----~l~gi~~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~----~l~~~~~~------~~~gw~~~ 189 (452)
T PRK11273 125 VLL----FLCGWFQGMGWPPCGRTMVHWWS-QKERGGIVSVWNCAHNVGGGLPP----LLFLLGMA------WFNDWHAA 189 (452)
T ss_pred HHH----HHHHHHHhccchHHHHHHHHhCC-hHHHHHHHHHHHHHHHhhhhHHH----HHHHHHHH------HhccHHHH
Confidence 222 24555555555555566777764 57899999988888777754322 2221 111 13489999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccc----cc------------c--CCchhHHHH-HHHHHhHHHHHHHHHHHHHHHHH
Q 018940 206 AYSSIFIGCCFVGIFLSRTEEPRLKM----GL------------R--GNSHARISW-AYWFKKILYYQVALVYMLTRLVV 266 (348)
Q Consensus 206 ~~i~~~i~~~~~ll~~~~~~e~~~~~----~~------------~--~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~ 266 (348)
+++.+++.++..++..+..||++.+. ++ + ++.+.++.+ +..+|||.++...+..++.....
T Consensus 190 f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 269 (452)
T PRK11273 190 LYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR 269 (452)
T ss_pred HHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 99888777777677777777643210 00 0 001112222 34678888887777766666677
Q ss_pred HhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhh
Q 018940 267 NVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQ 314 (348)
Q Consensus 267 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~ 314 (348)
+....|+|.|++++.|++..+.+.......++.+++.++.+++ ||+++
T Consensus 270 ~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 270 YGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 7788899999999888887666655566667888899999998 99954
No 45
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.88 E-value=1.3e-19 Score=173.97 Aligned_cols=274 Identities=13% Similarity=0.023 Sum_probs=178.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhc
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFG 109 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~ 109 (348)
..++......+.+.++++.|+++. |.|+.++|++.++..+...+.+|+.|+++||+||||.+ ..+....+++......
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l-~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI-VTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH-HHHHHHHHHHHHHHHH
Confidence 444555666667789999988775 99999999999999999999999999999999998875 4566666666544321
Q ss_pred CcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018940 110 GCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (348)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~ 189 (348)
. .+.+...+. ..+.+++.+...++..+++.+..+ +|+|+++.++.+...++|..+++.+++.+.
T Consensus 96 ---~------~~~~~l~~~----~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-- 159 (400)
T PRK11646 96 ---A------HEPWLLWLS----CILSGLGGTLFDPPRTALVIKLIR-PHQRGRFFSLLMMQDSAGAVIGALLGSWLL-- 159 (400)
T ss_pred ---h------ccHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 1 133322222 235666666677777888888875 678999999999898998888766654443
Q ss_pred ccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 018940 190 STAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 269 (348)
Q Consensus 190 ~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (348)
..+|++.+++.+++.++..++.....||++.+ +++++.++.+++.++||+++...+..+.........
T Consensus 160 ---------~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (400)
T PRK11646 160 ---------QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS---TVRTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQV 227 (400)
T ss_pred ---------HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc---ccchhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 34799999887777666655555556653221 112233456778889998775544333332333334
Q ss_pred hHHHHHHHhhcccccchhhhHHhHHHHHHHHHHH-HHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhh
Q 018940 270 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVS-ILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILI 336 (348)
Q Consensus 270 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~ 336 (348)
..++|.|+++..+ +..+.+....+..+....+. ++.++. ||++.+ +.+..+..+.+++...+.+
T Consensus 228 ~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~~~~~~~~~~~~~~l~~ 293 (400)
T PRK11646 228 MLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE--HRLMAGLLIMSLSMFPIGM 293 (400)
T ss_pred HHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh--HHHHHHHHHHHHHHHHHHH
Confidence 5688999988766 44444444333333333333 333444 455555 5566676666666654443
No 46
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.88 E-value=4.7e-20 Score=177.84 Aligned_cols=282 Identities=13% Similarity=0.065 Sum_probs=175.8
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHH-HhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFL-TDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~ 105 (348)
+...++.+......... .+..+++ ++.|+|+.+.+++.++..+...+++|+.|+++||+|||+.+ ..+.+..+++..
T Consensus 21 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l-~~~~~~~~~~~~ 98 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM-MWSIVAYSVGTG 98 (426)
T ss_pred HHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH-HHHHHHHHHHHH
Confidence 33334433333333333 4443444 45699999999999999999999999999999999998875 456666666654
Q ss_pred HHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018940 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (348)
Q Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~ 185 (348)
.... . .+.....+. ..+.|++.+.......+++.|..+ +|+|+++.++.+.+..+|.++++.+.+.
T Consensus 99 ~~~~--~-------~~~~~l~~~----r~l~G~g~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 99 LSGL--A-------SGVIMLTLS----RFIVGMGMAGEYACASTYAVESWP-KHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHH--H-------hHHHHHHHH----HHHHHHHHhhHHHHHHHHHHHhCC-HhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 3321 1 122322222 236677777666677778888875 6789999999888888887776544322
Q ss_pred HHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccc---ccC---Cc----hhHHHHHHHHHhHHHHHH
Q 018940 186 VFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG---LRG---NS----HARISWAYWFKKILYYQV 255 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~---~~~---~~----~~~~~~~~~~~~~~~~~~ 255 (348)
+ . +..+||+.+.+.++. .+..+......||++..++ +++ ++ ..++.+++.+|+|.++..
T Consensus 165 l----~------~~~~w~~~f~i~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (426)
T PRK12307 165 F----A------EAYGWRAAFFVGLLP-VLLVIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLT 233 (426)
T ss_pred H----c------ccCCHHHHHHHHHHH-HHHHHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHH
Confidence 2 2 245899998765433 2222222223344321100 000 00 012256778888876653
Q ss_pred HHHH---HHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 256 ALVY---MLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 256 ~l~~---~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
.... ++.....+....++|.|+++. |.+....+....+..++.+++.++.+++ ||+|+| +.+..+.++.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~--~~~~~~~~~~~~~~ 310 (426)
T PRK12307 234 LCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK--KTFSIGLLMSFLFI 310 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHH
Confidence 3322 222223334567899998874 7776666655566667888999999988 999999 77777777666655
Q ss_pred HhHhhcc
Q 018940 332 AGILILP 338 (348)
Q Consensus 332 ~~~~~~~ 338 (348)
+.....+
T Consensus 311 ~~~~~~~ 317 (426)
T PRK12307 311 FPLFRIP 317 (426)
T ss_pred HHHHHHc
Confidence 5444433
No 47
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.88 E-value=5.5e-20 Score=176.01 Aligned_cols=266 Identities=13% Similarity=-0.003 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
...+.+|...+|+|+|..+.|++.+...+...+.+|+.|+++||+||||.+ ..+....+++...... .| +
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l-~~~~~l~~~~~~~~~~--a~-------~ 96 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV-AISLLLIAVGALMREL--YP-------Q 96 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH-HHHHHHHHHHHHHHHH--Cc-------c
Confidence 345677777777899999999999999999999999999999999999986 4677777777654321 12 3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (348)
.....+. ..+.|++.+...+...+.+.+.. +++|+++.+....+...|..+++.+.+.+.. ...+
T Consensus 97 ~~~ll~~----r~l~Gig~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~---------~~~~ 161 (393)
T PRK09705 97 SALLLSS----ALLGGVGIGIIQAVMPSVIKRRF--QQRTPLVMGLWSAALMGGGGLGAAITPWLVQ---------HSET 161 (393)
T ss_pred hHHHHHH----HHHHHhHHHHHhhhhhHHHHHHc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHH---------hcCC
Confidence 3323222 23677777777766677777765 3678999999888888888777766544432 1237
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc
Q 018940 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDL 281 (348)
Q Consensus 202 ~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~ 281 (348)
||+.+.+.++..++..+..+...+++++ ++++++. ..++.+++|+.+.+.+...+..........|+|.|+++ .
T Consensus 162 w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~ 235 (393)
T PRK09705 162 WYQTLAWWALPAVVALFAWWWQSAREVA-SSHKTTT----TPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-I 235 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCc-cccCCCc----CCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-c
Confidence 8887766555544333322222222111 1111111 12345567777766666666667777888999999987 6
Q ss_pred cccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhccCC
Q 018940 282 RMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILPMN 340 (348)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~~~ 340 (348)
|.+..+.+.......++++++.++.+++ ||+++| +.+..+..+.+++...+...+++
T Consensus 236 g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~--~~~~~~~~l~~~~~~~~~~~~~~ 293 (393)
T PRK09705 236 GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR--KLLMLALVLQLVGFCGFIWLPLQ 293 (393)
T ss_pred CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch--HHHHHHHHHHHHHHHHHHHccch
Confidence 8887777766677778889999999998 999988 77777877777777655544443
No 48
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.88 E-value=8.2e-20 Score=174.12 Aligned_cols=277 Identities=13% Similarity=-0.009 Sum_probs=178.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
++.+.......+..+++|.|+++.|.|..++|++.++..+...+.+|++|.++||+|||+..........++....+..
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~- 89 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSA- 89 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH-
Confidence 3344444555677899999999999999999999999999999999999999999998543222111111111111110
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~ 190 (348)
. .++.+...+.+. +.+.+.+...+...++..+. +++|++..+......++|.++++.+.+.+.
T Consensus 90 --~-----~~~~~~l~~~~~----l~~~~~~~~~p~~~al~~~~---~~~~~~~~g~~~~~~slG~~~g~~l~g~l~--- 152 (382)
T TIGR00902 90 --G-----AHNAWLLFIAIG----LFALFFSAGMPIGDALANTW---QKQFGLDYGKVRLIGSAAFIIGSALFGGLI--- 152 (382)
T ss_pred --h-----hhhHHHHHHHHH----HHHHHHccchhHHHHHHHHH---HHHcCCCccHHHHHHHHHHHHHHHHHHHHH---
Confidence 0 123332322222 34555555444455555432 356777777777777777777665544443
Q ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccc-ccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 018940 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-LRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 269 (348)
Q Consensus 191 ~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (348)
+..|||..+.+.++.. +..++.+...|+++++++ ++++++..+.+++++|||+++...+..++.+.+....
T Consensus 153 -------~~~g~~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~ 224 (382)
T TIGR00902 153 -------GMFDEQNILAILTAGL-AFMLIGFLIKPTIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAY 224 (382)
T ss_pred -------HHcChhHHHHHHHHHH-HHHHHHHHcCCCCCCCccccccccccchhHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 2458988887665442 222333333333111111 1111122234678899999988887777777888888
Q ss_pred hHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhh
Q 018940 270 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILI 336 (348)
Q Consensus 270 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~ 336 (348)
.++.|.|++| .|.+..+.+....+..++.+++..+.+++ ||+|+| +.+.++.+..++......+
T Consensus 225 ~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~--~~l~~~~~~~~~~~~~~~~ 289 (382)
T TIGR00902 225 YGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR--DLLLISAIACVGRWAIIGA 289 (382)
T ss_pred HHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH--HHHHHHHHHHHHHHHHHHh
Confidence 8999999977 78888777765555556667777778887 999988 8888998888888766654
No 49
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.88 E-value=2e-19 Score=173.35 Aligned_cols=259 Identities=12% Similarity=0.034 Sum_probs=170.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
++.+..........+-+|..-++.|.|..+.++..+++.+..++++++.|+++||+||||.++ .+....+++......
T Consensus 23 ~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~~~~~~~~~- 100 (413)
T PRK15403 23 LYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLI-TGALIFTLACAATLF- 100 (413)
T ss_pred HHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHH-HHHHHHHHHHHHHHH-
Confidence 333333333344445555554556999999999999999999999999999999999998754 566666655543221
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~ 190 (348)
..+.....+.+ .+.|++.+.......+.+.|..+ +++|++..++.+....+|..+++.+++.+.
T Consensus 101 --------a~~~~~l~~~r----~l~Gi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~--- 164 (413)
T PRK15403 101 --------TTSMTQFLIAR----FIQGTSICFIATVGYVTVQEAFG-QTKGIKLMAIITSIVLVAPIIGPLSGAALM--- 164 (413)
T ss_pred --------cCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 12333332322 34555555444444566777664 567888888887777777777655443332
Q ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccccc-CCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Q 018940 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 269 (348)
Q Consensus 191 ~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (348)
+..|||+.|++.+++.++..+..++..||++.+++++ ++++..+.+++++|||.++...+...+........
T Consensus 165 -------~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~ 237 (413)
T PRK15403 165 -------HFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSW 237 (413)
T ss_pred -------HhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 2358999999888877776666566677753322111 11223456778899999888777766666677777
Q ss_pred hHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhh
Q 018940 270 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQ 314 (348)
Q Consensus 270 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~ 314 (348)
..+.|.|+++..|.++.+.+........+.++++.+.+.+ +|..+
T Consensus 238 ~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~ 283 (413)
T PRK15403 238 VAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTE 283 (413)
T ss_pred HHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 7788999999999988766655444455666666666654 44333
No 50
>PRK10054 putative transporter; Provisional
Probab=99.87 E-value=4.2e-20 Score=176.97 Aligned_cols=281 Identities=11% Similarity=0.063 Sum_probs=178.0
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 26 VLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
........+..........++++.|+++. |+|+.++|++.++..+...+.+|+.|+++||+||||.+ +.+....+++.
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~-~~~~~~~~~~~ 87 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM-LLAITAFASGF 87 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH-HHHHHHHHHHH
Confidence 33444566666777777789999999875 99999999999999999999999999999999998875 45655555554
Q ss_pred HHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018940 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~ 184 (348)
..... . .+.+...+.+ .+.+.+.+.......++.+|..+ +++|++..++.+...++|..+++.+.+
T Consensus 88 ~~~~~--~-------~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~lg~~igp~l~~ 153 (395)
T PRK10054 88 IAIPL--V-------NNVTLVVLFF----ALINCAYSVFSTVLKAWFADNLS-STSKTKIFSLNYTMLNIGWTVGPPLGT 153 (395)
T ss_pred HHHHH--H-------hHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcC-HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33211 1 1222221212 23444555555556777788774 578999999988888888888766544
Q ss_pred HHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 018940 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRL 264 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 264 (348)
.+. ..+|+..+.+.+++..+..++..+.+||++.+++ +++++ ....++.+|||+++...+..++...
T Consensus 154 ~l~-----------~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 220 (395)
T PRK10054 154 LLV-----------MQSINLPFWLAAICSAFPLVFIQIWVQRSEKAIA-TETGS-VWSPSVLLQDKALLWFTCSGFLASF 220 (395)
T ss_pred HHH-----------HhccCcHHHHHHHHHHHHHHHHHHHHhccccccc-cchhh-hhhhhhhccCceehHHHHHHHHHHH
Confidence 332 2368888887776666655555555655332211 11111 1223677889998877766666666
Q ss_pred HHHhhhHHHHHHHhhcc--cccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhh
Q 018940 265 VVNVSQAYLAFYVINDL--RMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILI 336 (348)
Q Consensus 265 ~~~~~~~~~~~yl~~~~--~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~ 336 (348)
.......+.+.|+.+.. +.+....+....+..+.........+.+ ||.++| +.+..++.+..++.....+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~l~~~~~~~~~~~~~~~~ 293 (395)
T PRK10054 221 VSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR--PLMTAGTLCFVIGLVGFIF 293 (395)
T ss_pred HHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch--hHHHHHHHHHHHHHHHHHH
Confidence 66556667777775443 3333333333222222222233444554 777777 7777887777777655544
No 51
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.87 E-value=1.2e-19 Score=172.83 Aligned_cols=274 Identities=8% Similarity=-0.019 Sum_probs=173.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCC
Q 018940 34 MLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMP 113 (348)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~ 113 (348)
++......+..+++|.|++|.|.|+.++|++.++..+...+.+|++|+++||+|||+.......+..++....... .
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~ 90 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWF---G 90 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHH---h
Confidence 3334445677899999999999999999999999999999999999999999998532211111111111111111 0
Q ss_pred CcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018940 114 CRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK 193 (348)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~ 193 (348)
.++.+...+. ..+.+.+.+...+...++..+. +++|++..+.....+++|..+++.+++.+.
T Consensus 91 -----~~~~~~l~i~----~~l~g~~~~~~~~~~~a~~~~~---~~~~~~a~~~~~~~~~lg~~igp~lgg~l~------ 152 (382)
T PRK11128 91 -----AHSFWLLFVA----IGLFNLFFSPLVPLTDALANTW---QKQIGLDYGKVRLWGSIAFVIGSALTGKLV------ 152 (382)
T ss_pred -----cccHHHHHHH----HHHHHHHHcccccHHHHHHHHH---HhhccCCcchHHHHHHHHHHHHHHHHHHHH------
Confidence 1233322222 1245555555555555666554 345676666666676777776655544443
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-cCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHH
Q 018940 194 THADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL-RGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAY 272 (348)
Q Consensus 194 ~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 272 (348)
+..|||..+++.++..++. .+..+..||+++++++ +++++.++.+++++|||.++...+..++.+.......++
T Consensus 153 ----~~~g~~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 227 (382)
T PRK11128 153 ----SWFGEQAILWILTAGVASM-LLGQLLRPTIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGF 227 (382)
T ss_pred ----HHcChhHHHHHHHHHHHHH-HHHHHccCCCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHH
Confidence 2458998887766544333 3333344553222111 111112346788999999887777666666667777888
Q ss_pred HHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhh
Q 018940 273 LAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILI 336 (348)
Q Consensus 273 ~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~ 336 (348)
+|.|++| .|.+..+.+....+..++.++..++.+++ ||+|+| +.+..+++..+++.+.+.+
T Consensus 228 ~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~--~~l~~~~~~~~~~~~~~~~ 289 (382)
T PRK11128 228 SAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR--DLLLLSAICGVVRWGLMGS 289 (382)
T ss_pred HHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHh
Confidence 8999865 68887666665555556667777778887 999988 8788888877777655543
No 52
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.87 E-value=3.4e-19 Score=175.39 Aligned_cols=281 Identities=14% Similarity=0.136 Sum_probs=174.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHh-h--CCChh--HHHH--HHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHH
Q 018940 31 SGHMLNDITAACWFTYLLLFLTD-I--GLSPR--GAAA--VMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~-~--g~s~~--~~g~--i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~ 103 (348)
+|.+. +.++.....+..++..+ . +.++. .++. +.++..+...++++++|+++||+||||.++ .+.++++++
T Consensus 23 ~g~~~-~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~-~~~~l~~i~ 100 (490)
T PRK10642 23 LGNAM-EWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILA-ITIVIMSIS 100 (490)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH-HHHHHHHHH
Confidence 44444 44455555666666655 3 34432 1333 257778899999999999999999999864 566676666
Q ss_pred HHHHhcCcCCCcccCcccch----hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHH
Q 018940 104 FSSVFGGCMPCRILSTSTLK----VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (348)
Q Consensus 104 ~~~l~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~ 179 (348)
..+... .| ++. +....+.+...+.|++.+....+..++++|..| +++|++..++.+.+..+|..++
T Consensus 101 ~~~~a~--~~-------~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p-~~~Rg~~~~~~~~~~~~G~~lg 170 (490)
T PRK10642 101 TFCIGL--IP-------SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSP-DRKRGFMGSWLDFGSIAGFVLG 170 (490)
T ss_pred HHHHHh--cc-------cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHH
Confidence 643321 23 221 111123333356778888888888899999885 5789999998888888887777
Q ss_pred HHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccc---c--cc-CC----chhHHHHHHHHHh
Q 018940 180 YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---G--LR-GN----SHARISWAYWFKK 249 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~---~--~~-~~----~~~~~~~~~~~~~ 249 (348)
+.+...+...+... .....|||+.|++.++++++ .++.....||++... + ++ ++ ++.+.++++++++
T Consensus 171 ~~~~~~~~~~~~~~--~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (490)
T PRK10642 171 AGVVVLISTIVGEA--NFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATK 247 (490)
T ss_pred HHHHHHHHHhcCHH--HhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHH
Confidence 66544433332210 00246899999987665554 333445677753211 0 00 00 0112245566653
Q ss_pred -HHHHH-HHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHH
Q 018940 250 -ILYYQ-VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVL 326 (348)
Q Consensus 250 -~~~~~-~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l 326 (348)
++... .....++....+++...|+|.|+++..|.+............++.+++.++.+++ ||+||| +.+..+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~~~~~~~~ 325 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR--PFVILGSVA 325 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHH
Confidence 22222 2223344456777888899999988888877555544445566778888888988 999999 777766654
Q ss_pred HH
Q 018940 327 WV 328 (348)
Q Consensus 327 ~~ 328 (348)
..
T Consensus 326 ~~ 327 (490)
T PRK10642 326 LF 327 (490)
T ss_pred HH
Confidence 33
No 53
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.87 E-value=6.3e-20 Score=176.80 Aligned_cols=285 Identities=8% Similarity=-0.084 Sum_probs=184.8
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHH
Q 018940 28 YYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV 107 (348)
Q Consensus 28 ~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l 107 (348)
......+............+|.+.++.+.|+.+.|++.+...+...+.+++.|+++||+||||.++ .+.+..+++...+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~-~~~~~~~~~~~~~ 99 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL-LARGTCGLGFIGL 99 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE-ehHHHHHHHHHHH
Confidence 333445555666666677788888888779999999999999999999999999999999998754 4555444443322
Q ss_pred hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
.. . .+....+.+...+ ...+.+++.+....+..+++++..+ +++|++..+..+...++|..+++.+++.+.
T Consensus 100 ~~---~-~~~~~~~~~~l~~----~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~ 170 (417)
T PRK10489 100 AL---N-AFLPEPSLLAIYL----LGLWDGFFGSLGVTALLAATPALVG-RENLMQAGAITMLTVRLGSVISPALGGLLI 170 (417)
T ss_pred HH---H-HHcCCCcHHHHHH----HHHHHHHHHHHHHHHHhhhhhhccC-HHHHHHHHHHHHHHHhHHHHhHHHHHHHHH
Confidence 10 0 0000112222222 2234566666666677788888874 578899999888888888887766655444
Q ss_pred HhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc--cCCchhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 018940 188 SVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL--RGNSHARISWAYWFKKILYYQVALVYMLTRLV 265 (348)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 265 (348)
. ..+|++.+.+.++..++..+ .....||.+.++++ ++.++.++.++..+|||.++...+..++.. .
T Consensus 171 ~----------~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (417)
T PRK10489 171 A----------AGGVAWNYGLAAAGTFITLL-PLLRLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLT-M 238 (417)
T ss_pred H----------HHhhHHHHHHHHHHHHHHHH-HHHhCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHH-H
Confidence 2 34788887766555444433 34455654322111 111233455667788888665544443332 2
Q ss_pred HHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhh
Q 018940 266 VNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILI 336 (348)
Q Consensus 266 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~ 336 (348)
..+...++|.|.++..|.+..+.+.+.....++.+++.++.+++ ||.+++ +.+..+.+...++.+.+.+
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~--~~l~~~~~~~~~~~~~~~~ 308 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG--LLMLLSTLGSFLAVGLFGL 308 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc--hHHHHHHHHHHHHHHHHHc
Confidence 34567789999999889987776666666667888888888887 665544 6777777666666655443
No 54
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=3.6e-19 Score=170.08 Aligned_cols=252 Identities=14% Similarity=0.073 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcc
Q 018940 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~ 116 (348)
........+.+|.+.++.|.|+.+.|++.++..+...+++++.|+++||+||||.++ .+....+++...... .
T Consensus 21 ~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~-~~~~~~~~~~~~~~~--~---- 93 (394)
T PRK11652 21 QMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVIL-VGMSIFILGTLVALF--A---- 93 (394)
T ss_pred HHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH-HHHHHHHHHHHHHHH--H----
Confidence 333444455667777777999999999999999999999999999999999988754 566555555543221 1
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc
Q 018940 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHA 196 (348)
Q Consensus 117 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~ 196 (348)
.+.....+.+ .+.+++.+...+...++..+..+ +++|++..++.+.+..++..+++.+.+.+.
T Consensus 94 ---~~~~~l~~~~----~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~--------- 156 (394)
T PRK11652 94 ---HSLTVLIAAS----AIQGLGTGVGGVMARTLPRDLYE-GTQLRHANSLLNMGILVSPLLAPLIGGLLT--------- 156 (394)
T ss_pred ---ccHHHHHHHH----HHHHhhhhHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 1233222222 34555555544445556666553 467788777777676666665544433322
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 018940 197 DLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFY 276 (348)
Q Consensus 197 ~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y 276 (348)
+..+||+.+.+.++..++..++..+..||++.+++ ++++.++.+++.+|||+++...+..+...........+.+.|
T Consensus 157 -~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (394)
T PRK11652 157 -TLFGWRACYLFLLLLGAGVTFSMARWMPETRPADA--RRTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVL 233 (394)
T ss_pred -hccChHHHHHHHHHHHHHHHHHHHHhCCccCcccc--chhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 23579999988777776666666666777533221 122245667888999987765554444444555556677888
Q ss_pred HhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 277 VINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
+++..|.+..+.+.......++.++++.+.+++ ||.+++
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 273 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL 273 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887766665555556667777777776 777643
No 55
>PRK03699 putative transporter; Provisional
Probab=99.87 E-value=3.3e-19 Score=170.63 Aligned_cols=265 Identities=9% Similarity=-0.005 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc
Q 018940 40 AACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (348)
Q Consensus 40 ~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~ 119 (348)
.......+|.+.++.|+|+.+.|++.+...+...+++++.|+++||+||||.++ .+....+++...... .
T Consensus 23 ~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~-~~~~~~~i~~~l~~~--~------- 92 (394)
T PRK03699 23 VIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLI-FGFALMILAVAGLMF--S------- 92 (394)
T ss_pred HHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHHHHH--c-------
Confidence 344556677776667999999999999999999999999999999999998754 566565565543321 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchh
Q 018940 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199 (348)
Q Consensus 120 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 199 (348)
.+.......+ .+.+++.+.......+.+.+..+ +++|++..+..+....+|+.+++.+.+.++. ..
T Consensus 93 ~~~~~~~~~~----~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------~~ 158 (394)
T PRK03699 93 HSLALFSIAM----FVLGVVSGITMSIGTFLITHVYE-GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA---------RS 158 (394)
T ss_pred chHHHHHHHH----HHHHHhhHhhccchhHHhhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cc
Confidence 1233222222 34556555555556677788774 5678888777766666666655444333221 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Q 018940 200 NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIN 279 (348)
Q Consensus 200 ~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~ 279 (348)
.+||+.+.+.+++.++..++.+. .+.++.++++++++ ++..+. ..++.++...+..++.....+....|+|.|+++
T Consensus 159 ~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 234 (394)
T PRK03699 159 IEWYWVYACIGLVYVAIFILTLF-SEFPALGKHAPKAD--KPVAKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQK 234 (394)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh-cCCccccccCcccc--Cccccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999998877766655444332 22111111111111 111111 124555555555555556666778899999999
Q ss_pred cccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhH
Q 018940 280 DLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGI 334 (348)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~ 334 (348)
+.|++..+.+.+..+..++.+++.++.+++ ||+++| +.+..+..+.++....+
T Consensus 235 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~--~~l~~~~~~~~~~~~~~ 288 (394)
T PRK03699 235 KFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ--RILTVLAGLALVLMYLF 288 (394)
T ss_pred HcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh--hHHHHHHHHHHHHHHHH
Confidence 999988777766666677889999999998 999998 76666665555554443
No 56
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=1.8e-19 Score=172.38 Aligned_cols=286 Identities=12% Similarity=0.065 Sum_probs=168.9
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHH
Q 018940 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV 107 (348)
Q Consensus 29 ~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l 107 (348)
+....+.....+....++++.|+++. |.|+.+.|++.++..+...+.+|+.|+++||+||||.++. +....++.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~-~~~~~~~~~~~~ 85 (396)
T TIGR00882 7 FGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLW-IISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH-HHHHHHHHHHHH
Confidence 33344555566667789999999885 9999999999999999999999999999999999998653 333333332211
Q ss_pred hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
+. .. +.+... ........+...+.+++++.......++..+.. ++++...+......++|..+++.+++.+
T Consensus 86 ~~--~~--~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~g~~~g~~~~g~l- 156 (396)
T TIGR00882 86 FI--YV--FGPLLQ-SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS---RNSNFEYGKARMFGCVGWALCASIAGIL- 156 (396)
T ss_pred HH--HH--hhhHHH-HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh---hhcccccchhhhhcccHHHHHHHHHhhh-
Confidence 10 00 000000 001111111122344555554444445554432 2233333444455566666554443222
Q ss_pred HhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc------cCCchhHHHHHHHHHhHHHHHHHHHHHH
Q 018940 188 SVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL------RGNSHARISWAYWFKKILYYQVALVYML 261 (348)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 261 (348)
. ..+|+..|++.+++.++..++.+...+|+++++++ +++++..++.++.+|||+++...+..++
T Consensus 157 ---~-------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 226 (396)
T TIGR00882 157 ---F-------SIDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVG 226 (396)
T ss_pred ---h-------ccCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHH
Confidence 1 24789999888777777766655545553221110 1111223456788999987766555544
Q ss_pred HHHHHHhhhHHHHHHHhhcc---cccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhh
Q 018940 262 TRLVVNVSQAYLAFYVINDL---RMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILI 336 (348)
Q Consensus 262 ~~~~~~~~~~~~~~yl~~~~---~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~ 336 (348)
..........+++.|+.+.. +.+....+....+..+..+++.+..+++ ||+|+| +.+.++..+.+++......
T Consensus 227 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~--~~l~~~~~l~~l~~~~~~~ 303 (396)
T TIGR00882 227 VACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK--NALLIAGTIMSVRIIGSSF 303 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHHHHHHHh
Confidence 44555555567788877654 3333344544444555666677778887 999999 8888887777776655443
No 57
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.87 E-value=6.1e-19 Score=168.74 Aligned_cols=275 Identities=12% Similarity=0.024 Sum_probs=166.7
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~ 105 (348)
..+..+.+..........++++.|+++. |.|++++|++.+...+...+.+++.|.++||+||||.+++.+.+..++...
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~ 97 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACT 97 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Confidence 3444456777777777889999998765 999999999988887777777777777799999999866555554444433
Q ss_pred HHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccc--hhHHHHHHHHHHHHHHHHHHHH
Q 018940 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSR--VVLTSCRNAFTMVANLSLYAIA 183 (348)
Q Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R--~~~~~~~~~~~~ig~~~~~~~~ 183 (348)
.... ..+.+...+. ..+.+...+...+...++..+..+ +++| +..+++.+.+.++|.++++.++
T Consensus 98 ~~~~---------~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lg~~~g~~i~ 163 (393)
T PRK15011 98 LFAW---------NRNYFVLLFV----GVFLSSFGSTANPQMFALAREHAD-KTGREAVMFSSFLRAQVSLAWVIGPPLA 163 (393)
T ss_pred HHHH---------hhHHHHHHHH----HHHHHHHHHhhHHHHHHHHHHHhh-hccchHHHHHHHHHHHHHHHHHHhhHHH
Confidence 2211 1122211111 112333333334444455555432 3334 2345666777777777765544
Q ss_pred HHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhH-HHHHHHHHHHHH
Q 018940 184 FIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKI-LYYQVALVYMLT 262 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~ 262 (348)
+.+. +..|||+.+++.+++.++..++.+...||.+.++++++ ++ .+. ..+|+ ..+.......+.
T Consensus 164 ~~l~----------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~ 228 (393)
T PRK15011 164 YALA----------MGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT-GT-LEA---PRRNRRDTLLLFVICTLM 228 (393)
T ss_pred HHHH----------HhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc-cc-ccc---cccccccHHHHHHHHHHH
Confidence 3332 24589999988888777777777777777532221111 11 111 12232 223232233333
Q ss_pred HHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHH
Q 018940 263 RLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGA 332 (348)
Q Consensus 263 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~ 332 (348)
.........+.|.|+++..|++..+.+.+.....++.+++.++.+++ ||+|+| +.+..+....++...
T Consensus 229 ~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~--~~~~~~~~~~~~~~~ 297 (393)
T PRK15011 229 WGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR--FLMRVAAVAGVCFYA 297 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--HHHHHHHHHHHHHHH
Confidence 34445556789999999889987766655455556667788889997 999999 666666555544443
No 58
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=5.4e-20 Score=173.32 Aligned_cols=250 Identities=14% Similarity=0.085 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
......|.+.++.|.|..+.|++.++..+...+++++.|+++||+||||.+ ..+....+++..+... . .+
T Consensus 13 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~~~~~--~-------~~ 82 (379)
T TIGR00881 13 NFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL-PIGLILCAIVNLFFGF--S-------TS 82 (379)
T ss_pred hhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh-HHHHHHHHHHHHHHHH--h-------hh
Confidence 333444544445599999999999999999999999999999999999875 4566666666543321 1 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (348)
.....+. ..+.+++.+...+...+++.+..+ +++|++..++.+.+..+|..+++.+....+ . ...+
T Consensus 83 ~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~------~~~~ 148 (379)
T TIGR00881 83 LWVMAAL----WALNGIFQGMGWPPCGRTVTKWFS-RSERGTWVSFWNCSHNVGGGLLPPLVLFGI---A------ELYS 148 (379)
T ss_pred HHHHHHH----HHHHHhhccccCCchHHHHHHhcC-HhhheeeEeehhccchhHHHHHHHHHHHHH---H------hcCC
Confidence 2322222 235666667667777788888874 578999989888888888777652211211 1 2457
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccc-----c---cC-------C----chhHHHHHHHHHhHHHHHHHHHHHHH
Q 018940 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-----L---RG-------N----SHARISWAYWFKKILYYQVALVYMLT 262 (348)
Q Consensus 202 ~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~-----~---~~-------~----~~~~~~~~~~~~~~~~~~~~l~~~~~ 262 (348)
|++.+.+.+++.++..++.+...||++++++ + ++ + ++.+...++.+|+|.++.+.+..++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (379)
T TIGR00881 149 WHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFV 228 (379)
T ss_pred chhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999888877777776776666766432110 0 00 0 11122356678888888777777777
Q ss_pred HHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 263 RLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 263 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
.........|.|.|+.+..|.+..+.+.......++.+++.++.+++ ||..+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 229 YVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC
Confidence 77777888899999999889987776666666677888899999987 886544
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.86 E-value=1.8e-19 Score=174.96 Aligned_cols=250 Identities=12% Similarity=0.043 Sum_probs=169.6
Q ss_pred HHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhH
Q 018940 46 YLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVE 125 (348)
Q Consensus 46 ~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 125 (348)
+..+++++.|+|+.+.|++.++..+...+++++.|+++||+||||.+ ..+.+..+++...... .+. ...+....
T Consensus 48 ~~~p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~-~~~~~~~~~~~~~~~~--~~~---~~~~~~~l 121 (438)
T TIGR00712 48 LAMPYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL-PAGLILSAAVMLLMGF--VPW---ATSSIAIM 121 (438)
T ss_pred hhhHHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh-HHHHHHHHHHHHHHhc--ccc---ccchHHHH
Confidence 34456666799999999999999999999999999999999998875 4566666666543321 120 01122211
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHH
Q 018940 126 TISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWI 205 (348)
Q Consensus 126 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 205 (348)
.+. ..+.+++.+....+....+.|..+ +++|+++.++.+.+.++|+.+++.+.+.... ...+||+.
T Consensus 122 ~~~----~~l~g~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~---------~~~~w~~~ 187 (438)
T TIGR00712 122 FVL----LFLNGWFQGMGWPPCGRTMVHWWS-QSERGTIVSIWNCAHNIGGGIPPLLVLLGMA---------WFNDWHAA 187 (438)
T ss_pred HHH----HHHHHHHhhcchHHHHHHHHHhcC-cccchhHHHHHHHHHHhHhHHHHHHHHHHHH---------HhhhhHHH
Confidence 111 224566666655666677788774 6789999999888888877765544322221 23589999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccc---c-c---c--------C-C--chhHHH-HHHHHHhHHHHHHHHHHHHHHHHH
Q 018940 206 AYSSIFIGCCFVGIFLSRTEEPRLKM---G-L---R--------G-N--SHARIS-WAYWFKKILYYQVALVYMLTRLVV 266 (348)
Q Consensus 206 ~~i~~~i~~~~~ll~~~~~~e~~~~~---~-~---~--------~-~--~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~ 266 (348)
+++.+++.++..++.++.+||++.+. + + + + + .+.++. .+..+||+.++...+..++.....
T Consensus 188 f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (438)
T TIGR00712 188 LYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLR 267 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHH
Confidence 99888887777767777777643210 0 0 0 0 0 011111 124678888777766655655666
Q ss_pred HhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 267 NVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 267 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
++...|+|.|+++..|++..+.+.......+.++++.++.+++ ||++++
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 7788899999999889888777766666777889999999998 999755
No 60
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.86 E-value=2.9e-19 Score=168.35 Aligned_cols=265 Identities=15% Similarity=0.101 Sum_probs=176.8
Q ss_pred HHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccch
Q 018940 44 FTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (348)
Q Consensus 44 ~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 123 (348)
.+.+|.+.++.|+|+.+.|++.+...+...+++++.|+++||+||||.++ .+....+++..... .+ +..
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~---~~-------~~~ 88 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVA-AGLLLIAAGILIRS---AP-------GTA 88 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHH-HHHHHHHHHHHHHH---hc-------cHH
Confidence 46677777777999999999999999999999999999999999998864 46555555443221 11 222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHH
Q 018940 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYR 203 (348)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 203 (348)
...+. ..+.+++.+.......+.+.+.. +++|+++.+..+.+..+|..+++.+.+++.... ..+||
T Consensus 89 ~l~~~----~~~~g~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~--------~~~w~ 154 (355)
T TIGR00896 89 LLFAG----TALIGVGIAIINVLLPSLIKRDF--PQRVGLMTGLYSMALMGGAALAAAATVPLAQHS--------GGHWQ 154 (355)
T ss_pred HHHHH----HHHHHHHHHHHhccchHHHHHhC--cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------hhhHH
Confidence 22222 23456666655555555666654 357899999988888888888776665554321 23588
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccc
Q 018940 204 WIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM 283 (348)
Q Consensus 204 ~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~ 283 (348)
+.+.+.+++.++... .+.+|.+.+++++ +++.++..++.+|||.++...+...+..........|+|.|+++ .|.
T Consensus 155 ~~f~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~ 229 (355)
T TIGR00896 155 QALAWWALPALLALL---AWIPQVRRRVAAN-QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGA 229 (355)
T ss_pred HHHHHHHHHHHHHHH---HHhhhhccccCCC-CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 888766554433322 2234422211111 11111234567888887766666555556677778899999987 588
Q ss_pred cchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhccC
Q 018940 284 GQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILPM 339 (348)
Q Consensus 284 ~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~~ 339 (348)
+..+.+.......++.+++.++.+++ ||+++| |+.+..+..+.+++.+.+.+.+.
T Consensus 230 ~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
T TIGR00896 230 SAATAGSLLALMQLAQAASALLIPALARRVKDQ-RGIVAVLAVLQLVGLCGLLFAPM 285 (355)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHhhh
Confidence 87777766677778899999999998 999655 26677777777777766665543
No 61
>PRK09952 shikimate transporter; Provisional
Probab=99.86 E-value=8.5e-19 Score=170.21 Aligned_cols=304 Identities=12% Similarity=0.030 Sum_probs=180.9
Q ss_pred CCCCCCCCCchHhhHH-hhhhhHHHHHHHHHHHHH-HHHHHh-h--CCChhHHHHHH-----HHHHHHHHhhhhhhHhhh
Q 018940 14 DDSFTQPVGRWSVLYY-GSGHMLNDITAACWFTYL-LLFLTD-I--GLSPRGAAAVM-----LSGQIADGFATIFIGELI 83 (348)
Q Consensus 14 ~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~l-~~~~~~-~--g~s~~~~g~i~-----~~~~i~~~i~~p~~G~l~ 83 (348)
.||++-.++.+++..+ .+.....+.++.....+. +.+..+ . +.++. .|++. ++..+...+++++.|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~ 88 (438)
T PRK09952 10 PDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFG 88 (438)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3666555555444332 223444455555555554 344443 3 67766 45543 355667788899999999
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc-chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccch
Q 018940 84 DRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST-LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRV 162 (348)
Q Consensus 84 Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~ 162 (348)
||+||||.++ .+....+++..+... .|. ... ..+....+.+...+.|++.+...+...+++.|..| +++|+
T Consensus 89 Dr~Grr~~l~-~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p-~~~rg 160 (438)
T PRK09952 89 DRLGRKRMLM-LTVWMMGIATALIGL--LPS----FSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAP-KNKKA 160 (438)
T ss_pred HhhccHHHHH-HHHHHHHHHHHHHhc--CCc----HHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCC-CCCCc
Confidence 9999999865 566666666544321 231 010 01111123333456778877777777788889885 57899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccc---ccCCch-
Q 018940 163 VLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG---LRGNSH- 238 (348)
Q Consensus 163 ~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~---~~~~~~- 238 (348)
+..+..+.+..+|..++..+...+...+.... ....|||+.|++.+++.++. +......||++...+ ++++.+
T Consensus 161 ~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~--~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~~~~~~~ 237 (438)
T PRK09952 161 FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQ--FLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHEQAAAKK 237 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH--hhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhhcccccc
Confidence 98888888888887776655444333222100 02368999998876665443 333344566432111 101111
Q ss_pred hHHHHHHHHHhHHHHHHH-HHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhh
Q 018940 239 ARISWAYWFKKILYYQVA-LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRL 316 (348)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~ 316 (348)
.....+.++++|+.+... ...++.....+...+|.|.|+++..|++.+.......+..+.++++.++.+++ ||+|||
T Consensus 238 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr- 316 (438)
T PRK09952 238 RIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR- 316 (438)
T ss_pred cCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-
Confidence 111233466777655543 34555556677788899999998888877544334444556667788888988 999999
Q ss_pred hHHHHHHHHHHHHHH
Q 018940 317 KAYYSAGGVLWVFCG 331 (348)
Q Consensus 317 k~~~~~g~~l~~v~~ 331 (348)
+.+..+.++.+++.
T Consensus 317 -~~~~~~~~~~~~~~ 330 (438)
T PRK09952 317 -RVYITGALIGTLSA 330 (438)
T ss_pred -HHHHHHHHHHHHHH
Confidence 77777766555544
No 62
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.86 E-value=4.7e-19 Score=168.76 Aligned_cols=275 Identities=13% Similarity=0.052 Sum_probs=176.1
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
......++.+..........+++|.|.++.|.|+.++|++.+...+...+++|+.|+++||+||||.+. .+....+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~-~~~~~~~~~~ 85 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYY-LASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 355666777778888888889999999988999999999999999999999999999999999998865 5666666655
Q ss_pred HHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018940 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~ 184 (348)
..... . .+.....+.+ .+.|++.+...+...+.+.+..+ +++|++..+..+.+.++|..+++.+.+
T Consensus 86 ~~~~~--~-------~~~~~l~~~~----~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~ 151 (381)
T PRK03633 86 AGLGL--M-------VGFWSWLAWR----FVAGIGCAMIWVVVESALMCSGT-SRNRGRLLAAYMMVYYLGTVLGQLLVS 151 (381)
T ss_pred HHHHH--h-------ccHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43221 1 1333222222 35667766665555555666654 568999999888888888777655543
Q ss_pred HHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 018940 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRL 264 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 264 (348)
.+..... ....|+.... ......+.+...+|+ ++++++ +++.++.+|||.++......++...
T Consensus 152 ~l~~~~~------~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (381)
T PRK03633 152 KVSTELM------SVLPWVTGLV-----LAAILPLLFTRILNQ--QAENHD----STSIWPMLKLRQARLGVNGCIISGI 214 (381)
T ss_pred ccccccc------chHHHHHHHH-----HHHHHHHHHhcccCC--CCCCCC----CCCHHHHHHhcchHHHHHHHHHHHH
Confidence 3321110 1123332211 111111111112221 111111 1234567888886654433333334
Q ss_pred HHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhH
Q 018940 265 VVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGI 334 (348)
Q Consensus 265 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~ 334 (348)
.......++|.|+++ .|.+..+.+....+..++.+++.+..+++ ||+|+| +.+..+..+..++.+.+
T Consensus 215 ~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~--~~l~~~~~~~~~~~~~~ 282 (381)
T PRK03633 215 VLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL--LVLRVQVFVVILGSIAM 282 (381)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH--HHHHHHHHHHHHHHHHH
Confidence 455566789999887 47777666655566667888888888987 999999 77777777666665443
No 63
>PRK11043 putative transporter; Provisional
Probab=99.86 E-value=2e-18 Score=165.36 Aligned_cols=262 Identities=11% Similarity=0.033 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCccc
Q 018940 38 ITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (348)
Q Consensus 38 ~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~ 117 (348)
....+..+.++.+.++.|.|+.++|++.++..+...+++++.|+++||+||||.+ ..+.....++...... .
T Consensus 20 ~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~~~~~--~----- 91 (401)
T PRK11043 20 LATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL-LAGLSLFALGSLGMLW--V----- 91 (401)
T ss_pred HHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH-HHHHHHHHHHHHHHHH--h-----
Confidence 3334444555555566699999999999999999999999999999999999875 4555555555443221 1
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 018940 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (348)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
.+.....+.+ .+.+++.+.......+++.+..+ +++|++..+..+....++..+++.+.+.+.
T Consensus 92 --~~~~~l~~~~----~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~---------- 154 (401)
T PRK11043 92 --ESAAQLLVLR----FVQAVGVCSAAVIWQALVIDRYP-AQKANRVFATIMPLVALSPALAPLLGAWLL---------- 154 (401)
T ss_pred --cCHHHHHHHH----HHHHhhhHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 1333222222 24555555555556677777764 455666666665555666666554443332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 018940 198 LENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYV 277 (348)
Q Consensus 198 ~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl 277 (348)
+..+||+.+++.+++.++..++.+. .+|++.++ ++++.++.+++.+|+|+++...+...+..........+.|.|+
T Consensus 155 ~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 230 (401)
T PRK11043 155 NHFGWQAIFATLFAITLLLILPTLR-LKPSKKAR---KQSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFIL 230 (401)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHHH-cCCCCCcc---ccchHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 2358999988877777666555443 44422211 1122345678889999877655544444455556677888887
Q ss_pred hhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 278 INDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
++ .|.+..+.+.......++.+++.++.+++ ||+++| +....+....+++.
T Consensus 231 ~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~--~~~~~~~~~~~~~~ 282 (401)
T PRK11043 231 EQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGE--QLLPWLLVLFAVSV 282 (401)
T ss_pred HH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHH
Confidence 65 58887666654444456677888888887 999988 55555444444433
No 64
>PRK15075 citrate-proton symporter; Provisional
Probab=99.86 E-value=1.6e-18 Score=168.14 Aligned_cols=284 Identities=15% Similarity=0.074 Sum_probs=167.5
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHH-HH-----HHHHHHhhhhhhHhhhcccCCchHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVM-LS-----GQIADGFATIFIGELIDRFGHFKIWHGAGSVLV 100 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~-~~-----~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~ 100 (348)
....++.+....-...+....|...++.+.++.+.+.+. +. ..+...+++++.|+++||+||||.++ .+....
T Consensus 18 ~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~-~~~~~~ 96 (434)
T PRK15075 18 LRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI-VTLSIM 96 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH-HHHHHH
Confidence 344444444444444445555655566688776655432 22 23333567899999999999999865 566666
Q ss_pred HHHHHHHhcCcCCCcccCcccchhH----HHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHH
Q 018940 101 AVSFSSVFGGCMPCRILSTSTLKVE----TISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN 176 (348)
Q Consensus 101 ~i~~~~l~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~ 176 (348)
.++...... .| +.... .....+...+.+++.+....+..++++|..| +++|++..++.+.+.++|.
T Consensus 97 ~~~~~l~~~--~~-------~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p-~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 97 ASGTLLIAF--VP-------GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIAT-PGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred HHHHHHHHh--CC-------cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCC-cccchHHHHHHHHHHHHHH
Confidence 666543321 12 21110 0111222345667766666666778999885 6789999999888888887
Q ss_pred HHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHH-
Q 018940 177 LSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQV- 255 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 255 (348)
.+++.++..+...+... ..+..|||+.|++.++.. ....+.....||.+...+++++.+.++.++...++++.+..
T Consensus 167 ~~g~~~g~~l~~~~~~~--~~~~~gWr~~f~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (434)
T PRK15075 167 VFAALLGYLLNQWLSPA--QMAEWGWRIPFLIGCLIV-PFIFLIRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAG 243 (434)
T ss_pred HHHHHHHHHHHHhCCHH--HHhccchHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHH
Confidence 77666654443332210 002468999998654332 22222222233422111111111223334555566654433
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHH
Q 018940 256 ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVL 326 (348)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l 326 (348)
....++.....+....|.|.|+++..|++..+.+....+..++++++.++.+++ ||+||| +.+..+..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r--~~~~~~~~~ 313 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR--PVLIAFTVL 313 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHH
Confidence 233334455667788899999999889987766666666677888999999998 999999 666555443
No 65
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.86 E-value=2.1e-18 Score=165.18 Aligned_cols=267 Identities=9% Similarity=-0.014 Sum_probs=177.4
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~ 106 (348)
..+..+.+...+.+......++...++.+.++.+.+++.+.+.+...+.+|+.|+++||+||||.++ .+....+++...
T Consensus 6 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~-~~~~~~~~~~~~ 84 (393)
T PRK11195 6 YAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMF-IANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhH-HHHHHHHHHHHH
Confidence 3455666666665555555566666677999999999999999999999999999999999999865 565555555433
Q ss_pred HhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (348)
Q Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~ 186 (348)
... .+ +. ...+ .+.+++.+...+...++++|+.+ +|||+++.++.+....+|..+++.+++.+
T Consensus 85 ~~~--~~-------~~---~~~r----~l~G~~~a~~~pa~~a~i~~~~~-~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 85 MLF--GI-------HP---LLAY----GLVGIGAAAYSPAKYGILTELLP-GEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHH--HH-------HH---HHHH----HHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221 01 11 1222 35778888888888999999985 68899999998888888888877666554
Q ss_pred HHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCC------chhHHHHHHHHHhHHHHHHHHHHH
Q 018940 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN------SHARISWAYWFKKILYYQVALVYM 260 (348)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~ 260 (348)
.. ..|+..+.+.+.... ...+..+.+||++.+++++++ ++.++.++.+++||.++.......
T Consensus 148 ~~-----------~~~~~~~~i~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 215 (393)
T PRK11195 148 AD-----------PHAEAALAVCALIYL-LAALFNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTT 215 (393)
T ss_pred HH-----------HHHHHHHHHHHHHHH-HHHHHHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 42 235555544433322 223344566764322211111 112234566788887665444333
Q ss_pred HHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHH
Q 018940 261 LTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGV 325 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~ 325 (348)
+.+.........+|.|+++.+|.++.+.+.......++.++++++.+++ ||.++| +.+..++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~--~~~~~g~~ 279 (393)
T PRK11195 216 LFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL--RVLPAGIL 279 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--chHHHHHH
Confidence 3344445556677788888889988877776666777888888888887 777766 66666643
No 66
>PRK12382 putative transporter; Provisional
Probab=99.86 E-value=2.2e-18 Score=164.51 Aligned_cols=281 Identities=10% Similarity=0.039 Sum_probs=166.1
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHH
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~ 103 (348)
......++.+.......+..+.+|.|+++ .|.|+.++|++.+...+..++.+|+.|+++||+||||+++ .+.+..+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~-~~~~~~~~~ 94 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSAL-QGMLACGLA 94 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHH-HHHHHHHHH
Confidence 34445556666666667777888888765 5999999999999999999999999999999999999865 455544443
Q ss_pred HHHH-hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHH
Q 018940 104 FSSV-FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (348)
Q Consensus 104 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~ 182 (348)
.... .....+. ....+.... .+...+.|++.+...++..+++.+..+ +|+|+++.++.+.+...|..+++.+
T Consensus 95 ~~~~~~~~~~~~--~~~~~~~~l----~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~a~~~~~~~~~~g~~~g~~~ 167 (392)
T PRK12382 95 GLAYLLAAILPV--SAPFKFALL----VVGRLILGFGESQLLTGALTWGLGLVG-PKHSGKVMSWNGMAMYGALAAGAPL 167 (392)
T ss_pred HHHHHhhhcccc--chhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhhCC-ccccchhhhHHHHHHHHHHHHHHHH
Confidence 3211 1000110 000122212 222236677777666666677888774 6889999998877777776665544
Q ss_pred HHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHH
Q 018940 183 AFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLT 262 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 262 (348)
++.+. +..||++.+.+..++.++... .....||.+ ++++++++.++..+...+ +. +...+.
T Consensus 168 ~~~l~----------~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~-----~~~~l~ 228 (392)
T PRK12382 168 GLLLH----------SHFGFAALALTTMVLPLLAWA-FNGTVRKVP--AHAGERPSLWSVVGLIWK-PG-----LGLALQ 228 (392)
T ss_pred HHHHH----------hccChHHHHHHHHHHHHHHHH-HHHhccCCC--CCcccCchHHHHHHHHHH-hH-----HHHHHH
Confidence 33332 235788776654433322221 112223211 111111122222222111 11 112222
Q ss_pred HHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 263 RLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 263 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
.........+.|.|+++. +.+. .+.......++.+++.++.+++ ||+|+| |.+..+..+.+++.+...+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~ 299 (392)
T PRK12382 229 GVGFAVIGTFVSLYFASK-GWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGV--KVAIVSLLVETVGLLLLWLA 299 (392)
T ss_pred HHHHhHHHHHHHHHHHhc-CCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCC--eehHHHHHHHHHHHHHHHHc
Confidence 344445667888888764 5543 2233333445667788888887 999998 77778877777777655443
No 67
>TIGR00895 2A0115 benzoate transport.
Probab=99.85 E-value=3.3e-19 Score=169.19 Aligned_cols=262 Identities=15% Similarity=0.052 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc
Q 018940 40 AACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (348)
Q Consensus 40 ~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~ 119 (348)
......+.|.+.++.|.++.+.|++.++..+...+++++.|+++||+||||.+ ..+.+..+++...... .
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-~~~~~~~~~~~~~~~~--~------- 102 (398)
T TIGR00895 33 LAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL-LWSILLFSVFTLLCAL--A------- 102 (398)
T ss_pred HHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH-HHHHHHHHHHHHHHHH--c-------
Confidence 33444455555555699999999999999999999999999999999998775 4566655555543321 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchh
Q 018940 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199 (348)
Q Consensus 120 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 199 (348)
.+.....+. ..+.+++.+....+..+++.|..+ +++|++..++.+.+..+|..+++.+.+.+. +.
T Consensus 103 ~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~----------~~ 167 (398)
T TIGR00895 103 TNVTQLLIL----RFLAGLGLGGLMPNLNALVSEYAP-KRFRGTAVGLMFCGYPIGAAVGGFLAGWLI----------PV 167 (398)
T ss_pred cchHHHHHH----HHHHhcccccchhhHHHHHHHHcC-HHhhchhHhhHhhHHHHHHHHHHHHHHHHh----------hc
Confidence 122222222 235667777777778888999874 578999999988888888877666544433 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccccccc---c-c-----------------------c-cC-CchhHHHHHHHHHhH
Q 018940 200 NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK---M-G-----------------------L-RG-NSHARISWAYWFKKI 250 (348)
Q Consensus 200 ~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~---~-~-----------------------~-~~-~~~~~~~~~~~~~~~ 250 (348)
.+|++.+.+.+++..+..++.....||++.. + + + ++ +++.++.++..++++
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGK 247 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcch
Confidence 5788888877666666666666666664210 0 0 0 00 011122233333333
Q ss_pred H---HHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHH
Q 018940 251 L---YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVL 326 (348)
Q Consensus 251 ~---~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l 326 (348)
. ...+.+..++..........|+| ++.++.|.+..+.+.......++.+++.++.+++ ||+|+| +........
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~ 324 (398)
T TIGR00895 248 TARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR--VTALLLLLG 324 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH--HHHHHHHHH
Confidence 2 22233344455556667777888 6666678887766666666778889999999998 999988 554444433
Q ss_pred HHH
Q 018940 327 WVF 329 (348)
Q Consensus 327 ~~v 329 (348)
.+.
T Consensus 325 ~~~ 327 (398)
T TIGR00895 325 AVF 327 (398)
T ss_pred HHH
Confidence 333
No 68
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.85 E-value=3.1e-19 Score=172.21 Aligned_cols=282 Identities=11% Similarity=0.040 Sum_probs=159.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 32 GHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 32 g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
..+..........++++.|+++. |+|+.++|.+.++..+...+.+|+.|+++||+||||.+++ +....++.....+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~-~~~~~~~~~~~~~~- 95 (420)
T PRK09528 18 FFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLW-IISGLLVLFGPFFI- 95 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH-HHHHHHHHHHHHHH-
Confidence 34444455556789999999985 9999999999999999999999999999999999988654 33332222211110
Q ss_pred cCCCcccCcccchhHHHHHHHHH-HHHHHHHHHHHHhHhhhhhhccc-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 111 CMPCRILSTSTLKVETISYCVFA-AIFNVGWAATQVAHMSMVNCITL-NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~a~~~~~~~-~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
.. ..+.. ....+.. .+.++..+....+......++.+ .+++|+...+..+...++|..+++.+.+.+.
T Consensus 96 -~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~- 165 (420)
T PRK09528 96 -YV-----FAPLL---QYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILF- 165 (420)
T ss_pred -HH-----HHHHH---HHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHH-
Confidence 00 00000 0001000 01112222221111122222221 1234555556666666777776655543332
Q ss_pred hccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccc---c-cc--CCchhHHHHHHHHHhHHHHHHHHHHHHH
Q 018940 189 VSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---G-LR--GNSHARISWAYWFKKILYYQVALVYMLT 262 (348)
Q Consensus 189 ~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~---~-~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 262 (348)
..+|++.+++.+++.++..++.++..+|++++. + ++ +++...+..++.+|||.++.+.+...+.
T Consensus 166 ----------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~ 235 (420)
T PRK09528 166 ----------NINPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGV 235 (420)
T ss_pred ----------hcCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHH
Confidence 236888888877776666555554444432221 0 10 1111123345678888866554433333
Q ss_pred HHHHHhhhHHHHHHHhhcc---cccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 263 RLVVNVSQAYLAFYVINDL---RMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 263 ~~~~~~~~~~~~~yl~~~~---~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
.........++|.|+.+.. +.+..+.+....+..++.+++.++.+++ ||+|+| +.+..+.++.+++.....+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~l~~~~~~l~~~~ 312 (420)
T PRK09528 236 ACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK--NALLLAGTIMAVRIIGSGFA 312 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--hhhHHHHHHHHHHHHHHHhc
Confidence 3444444456777766543 4444444555555556667888888988 999999 77777777777766555443
No 69
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.85 E-value=3e-18 Score=163.98 Aligned_cols=283 Identities=9% Similarity=-0.002 Sum_probs=172.5
Q ss_pred hHhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHH
Q 018940 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAV 102 (348)
Q Consensus 24 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i 102 (348)
++.....+..+.......+..++++.+.++. |.|+.++|++.++..+..++.+|+.|+++||+||||.++ .+.+..++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~-~~~~~~~~ 93 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVV-FGLCGCAL 93 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHH-HHHHHHHH
Confidence 3445566666677777777888999887664 999999999999999999999999999999999999864 55555554
Q ss_pred HHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHH
Q 018940 103 SFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (348)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~ 182 (348)
+...... .. +..... ........+...+.|++.+.......+++.+.. ++|+|+++.++...+..+|..+++.+
T Consensus 94 ~~~~~~~--~~--~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l 167 (399)
T PRK05122 94 SGLLYLL--AG--LLAAWP-VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRV-GALHTGRVISWNGIATYGALAIGAPL 167 (399)
T ss_pred HHHHHHH--hh--hhhccc-hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhc-ChhhhccchhhhhhhhhHHHHHHHHH
Confidence 4322211 00 000000 111112222334677777777777777777877 46789999988877777776666555
Q ss_pred HHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHH
Q 018940 183 AFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLT 262 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 262 (348)
++.+.. ..+|++.+.+.+++.++..+. ....||+ +++++++ .++++.+|+ .+.......+.
T Consensus 168 ~~~l~~----------~~g~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~----~~~~~~~~~--~~~~~~~~~~~ 228 (399)
T PRK05122 168 GVLLYH----------WGGLAGLGLLIMLLALLGLLL-ARPRPAV--PPVKGER----LPFRRVLGR--VWPYGMGLALA 228 (399)
T ss_pred HHHHHH----------cccHHHHHHHHHHHHHHHHHH-HhcCCCC--CCCCccc----hhHHHHHHH--HHHHHHHHHHH
Confidence 443332 357888877665544332222 1112221 1111111 123333332 12112222333
Q ss_pred HHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 263 RLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 263 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
.........+.+.|+.+. |.+. .+.......++.+++.++.+++ ||+|+| +.+..+..+.+++.....+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~ 299 (399)
T PRK05122 229 SIGFGTIATFITLYYAAR-GWDG--AALALTLFGVAFVGARLLFGNLINRLGGL--RVAIVSLLVEILGLLLLWLA 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHc-cccc--chHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHh
Confidence 445556667888888754 5432 2333344556777888888887 999988 77777777777776555543
No 70
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.85 E-value=5.8e-18 Score=161.71 Aligned_cols=271 Identities=12% Similarity=-0.004 Sum_probs=173.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCChhHHHHH--HHHHHHHHHhhhhhhHh-hhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 34 MLNDITAACWFTYLLLFLTDIGLSPRGAAAV--MLSGQIADGFATIFIGE-LIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i--~~~~~i~~~i~~p~~G~-l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
+...+......+++|.|++|.|.|++++|.+ .....+...+.+|++++ .+||+||||.|++......+.....+..
T Consensus 11 ~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~- 89 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLAL- 89 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHc-
Confidence 4556666777899999999999999999997 46778888899999966 7999999999866543333322222210
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~ 190 (348)
..+ . .....+.. ......+...+..++...++..|.. ++++++..++.+..+..+|..+++...+.+.
T Consensus 90 ~~~---~-~~~~~~~~----~~~~~~~~~~a~~d~~~d~~~~~~~-~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~--- 157 (390)
T TIGR02718 90 VGP---D-VAGAGWAV----GLLACASLASATQDIATDGMAAEHF-NGRTLAKGNAVQIAGVMIGFFGGGAGTLVLF--- 157 (390)
T ss_pred CCc---c-hhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhC-CHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 011 0 11111111 1112333445555666666665544 3445566777777666777776654433333
Q ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhh
Q 018940 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQ 270 (348)
Q Consensus 191 ~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 270 (348)
+..+||..+++.+++..+..+..++..+|+ .+++ +++++.++++++.+|||.++......++.+.......
T Consensus 158 -------~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~ 228 (390)
T TIGR02718 158 -------GKFGQRPAFLLVACVPLASLVCVLWLKDRA-VASP-EAPLARRASLFRFFRRPLAWSLLALALLSAMTAVSGF 228 (390)
T ss_pred -------HHhCHHHHHHHHHHHHHHHHHHHHHcCCCC-cCcc-ccchhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHH
Confidence 246899999988877766655554443332 2111 1111223456788999987777666667767777777
Q ss_pred HHHHHHHhhcccccchhhhHHhHHHH-HHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHH
Q 018940 271 AYLAFYVINDLRMGQSAKALVPAIIY-ICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVF 329 (348)
Q Consensus 271 ~~~~~yl~~~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v 329 (348)
.+.+.|++| .|++.++.+....+.. ...+++.++.+++ ||+|+| +.+..+.++.++
T Consensus 229 ~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~--~~l~~~~~~~~~ 286 (390)
T TIGR02718 229 GLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW--RTFILGVGLAGS 286 (390)
T ss_pred HHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH--HHHHHHHHHHHH
Confidence 889999987 5998887776544433 3556778888987 999999 777766665533
No 71
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.85 E-value=7.8e-19 Score=163.05 Aligned_cols=262 Identities=13% Similarity=0.039 Sum_probs=186.5
Q ss_pred HhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHH
Q 018940 52 TDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCV 131 (348)
Q Consensus 52 ~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 131 (348)
+|.|+|+.|.+++.++..+..++.-.+.|.+.||+|.||... .+.++..+-.+.+.. . .+..++ +.++...
T Consensus 42 ~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~-~s~~l~~IP~~~~~~---a---~~~~~~-~~ll~~g- 112 (417)
T COG2223 42 SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI-LSMLLLLIPCLGLAF---A---VTYPST-WQLLVIG- 112 (417)
T ss_pred cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH-HHHHHHHHHHHHHHH---H---ccCCch-HHHHHHH-
Confidence 445999999999999999999999999999999999988765 455554444432221 1 112233 2322222
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHH
Q 018940 132 FAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIF 211 (348)
Q Consensus 132 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 211 (348)
.+.|++-+.+ ....++++...| ||+++.+.++.- .+|+|..+...+.++++...+. ..|+....++.+
T Consensus 113 --ll~G~~GasF-av~m~~~s~~fP-~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~-------~~w~~~~~i~~~ 180 (417)
T COG2223 113 --LLLGLAGASF-AVGMPNASFFFP-KEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGF-------LAWRNVAGIYVV 180 (417)
T ss_pred --HHHhccccee-hcccccccccCC-hhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHH
Confidence 2455443332 224456777774 678999999887 7789988888887666654321 148888888888
Q ss_pred HHHHHHHHHHhhcccccccccccCCchhH-HHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhH
Q 018940 212 IGCCFVGIFLSRTEEPRLKMGLRGNSHAR-ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKAL 290 (348)
Q Consensus 212 i~~~~~ll~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 290 (348)
..++..++.++..+|.+..+++ .++.+ .+++..++||+.|.+++.|+....+..+...++|.|++++++++..+.+.
T Consensus 181 ~l~v~~v~~~~~~~d~p~~r~~--~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~ 258 (417)
T COG2223 181 ALAIAAVLAWLGMNDVPEHRAS--VKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGL 258 (417)
T ss_pred HHHHHHHHHHHHhCCChhhhcc--ccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Confidence 7888788888888775432221 11112 56788999999999999999999999999999999999999999877665
Q ss_pred HhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhcc
Q 018940 291 VPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILP 338 (348)
Q Consensus 291 ~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~ 338 (348)
+.......+.+.-++.|++ ||+|.+ |+.....+.++++.......+
T Consensus 259 ~a~~f~~~g~l~Rp~GG~LsDR~Gg~--rv~~~~f~~~~~~~~~l~~~~ 305 (417)
T COG2223 259 IAFLFPLIGALARPLGGWLSDRIGGR--RVTLAVFVGMALAAALLSLFL 305 (417)
T ss_pred HHHHHHHHHHHHHhccchhhhhccch--hHHHHHHHHHHHHHHHHHccc
Confidence 5444334444455778888 999999 877777777777776665554
No 72
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.85 E-value=1.5e-18 Score=164.29 Aligned_cols=257 Identities=16% Similarity=0.053 Sum_probs=160.0
Q ss_pred CChhHHHHHHHH-----HHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccc-hhHHHHH
Q 018940 56 LSPRGAAAVMLS-----GQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL-KVETISY 129 (348)
Q Consensus 56 ~s~~~~g~i~~~-----~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~-~~~~~~~ 129 (348)
.++.+.+.+... ..+...+++++.|+++||+||||.++ .+.+...++...... .+. .... .+.....
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~-~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~ 99 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLV-ITLLMMGIGTLLIGL--LPS----YATIGIWAPILL 99 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHH-HHHHHHHHHHHHHhh--CCC----hhhhHHHHHHHH
Confidence 556666665443 34445678999999999999998865 566666666543321 120 0000 0111112
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHH
Q 018940 130 CVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSS 209 (348)
Q Consensus 130 ~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 209 (348)
.+...+.|++.+....+..+++.|..+ +++|++..++.+.+..+|..+++.+...+...++.. .....+||+.+.+.
T Consensus 100 ~~~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~--~~~~~~w~~~~~~~ 176 (394)
T TIGR00883 100 LLARLIQGFSLGGEWGGAALYLAEYAP-PGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD--ALLEWGWRIPFLVS 176 (394)
T ss_pred HHHHHHHHhhccccccccHHHhhhcCC-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HhhccchHHHHHHH
Confidence 222235666666666667788888874 678999999999898888888776654433222210 00245899998877
Q ss_pred HHHHHHHHHHHHhhccccccccc-ccCCchhHHHHHHHHHhHH--HHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccch
Q 018940 210 IFIGCCFVGIFLSRTEEPRLKMG-LRGNSHARISWAYWFKKIL--YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS 286 (348)
Q Consensus 210 ~~i~~~~~ll~~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 286 (348)
+++.++... .....+|++..++ ++++++.+++.++.+++++ ++......++..........+.|.|++++.|.+..
T Consensus 177 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 255 (394)
T TIGR00883 177 AVLVLIGLY-LRRNLEETPVFEKAQEKHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSAN 255 (394)
T ss_pred HHHHHHHHH-HHHhcCCChhHHHHHhccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 655544333 3344555432211 1111122334566777765 55555566666677777888999999888888877
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHH
Q 018940 287 AKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGV 325 (348)
Q Consensus 287 ~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~ 325 (348)
+.+.......+..+++.++.+++ ||+||| +.+..+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~ 293 (394)
T TIGR00883 256 SALLVLMLSLILFFITIPLSGALSDRIGRR--PVLIIFTV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchH--HHHHHHHH
Confidence 66666566667788888888987 999998 65554433
No 73
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.84 E-value=5.1e-18 Score=157.90 Aligned_cols=256 Identities=18% Similarity=0.179 Sum_probs=191.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
+..+..........+..+.+.++.|.++.+.|++.+...+...+.+|+.|+++||+||||.+ ..+.....++......
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~-~~~~~~~~~~~~~~~~- 83 (352)
T cd06174 6 LGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL-LLGLLLFALGSLLLAF- 83 (352)
T ss_pred HHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhh-HHHHHHHHHHHHHHHH-
Confidence 34455555566667888888888899999999999999999999999999999999999864 5677776666654331
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~ 190 (348)
. .+.....+. ..+.+++.+....+..++..|..+ +|+|++..++.+....+|..+++.+.+.+..
T Consensus 84 --~------~~~~~~~~~----~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 148 (352)
T cd06174 84 --A------SSLWLLLVG----RFLLGLGGGALYPAAAALIAEWFP-PKERGRALGLFSAGFGLGALLGPLLGGLLAE-- 148 (352)
T ss_pred --h------ccHHHHHHH----HHHHHcccccccHhHHHHHHHhCC-ccchhhhhhHHHHHHHHHHHHHHHHHHHHHH--
Confidence 1 122222222 235667777777888899999885 5789999999999999998887776655442
Q ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhh
Q 018940 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQ 270 (348)
Q Consensus 191 ~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 270 (348)
..+|++.+.+.+++.++..++..+. + |.++...+..++.........
T Consensus 149 --------~~~~~~~~~~~~~~~~~~~~~~~~~-~------------------------~~~~~~~~~~~~~~~~~~~~~ 195 (352)
T cd06174 149 --------SLGWRWLFLILAILGLLLALLLLFL-L------------------------RLLLLLALAFFLLSFGYYGLL 195 (352)
T ss_pred --------HhhHHHHHHHHHHHHHHHHHHHHHH-H------------------------HHHHHHHHHHHHHHhHHHHHH
Confidence 3468888887766666555444322 1 555566666666677778888
Q ss_pred HHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhH-HHHHHHHHHHHHHHhHhhcc
Q 018940 271 AYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKA-YYSAGGVLWVFCGAGILILP 338 (348)
Q Consensus 271 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~-~~~~g~~l~~v~~~~~~~~~ 338 (348)
.+.|.|..+..|.+..+.+.......++.+++.++.+++ ||+|+| + .+..+..+..++.+...+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 196 TYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR--RLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHhc
Confidence 899999998878888777777777778889999988887 999999 7 88888888888877666543
No 74
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.84 E-value=6e-18 Score=166.46 Aligned_cols=280 Identities=15% Similarity=0.063 Sum_probs=171.2
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
......++.+............++.+.++.|+|+.+.+++.+...+..++++++.|+++||+||||.+ ..+.+..+++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~ 99 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM-VISIVLFSVGT 99 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHH
Confidence 33455555555555555555666666666799999999999999999999999999999999998875 45666666665
Q ss_pred HHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018940 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~ 184 (348)
..... ..+.....+. ..+.+++.+.......+++.|..+ +|+|++..+..+.+..+|..+++.+.+
T Consensus 100 ~~~~~---------~~~~~~l~~~----~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~ 165 (496)
T PRK03893 100 LACGF---------APGYWTLFIA----RLVIGMGMAGEYGSSATYVIESWP-KHLRNKASGFLISGFSIGAVVAAQVYS 165 (496)
T ss_pred HHHHH---------HhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43321 1123322222 235666666666677788888874 678999988888888888777665543
Q ss_pred HHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-cCCchhHHHHHHHHHh-HHH----------
Q 018940 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL-RGNSHARISWAYWFKK-ILY---------- 252 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~-~~~---------- 252 (348)
.+. +..+||+.+.+.+ +..+..++.....||++..+++ +++.+.++..+...++ +..
T Consensus 166 ~l~----------~~~~w~~~f~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (496)
T PRK03893 166 LVV----------PVWGWRALFFIGI-LPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAA 234 (496)
T ss_pred HHh----------ccCCHHHHHHHHH-HHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHH
Confidence 332 2458999887643 3333333334445654221111 1111001111111110 000
Q ss_pred --------------HH-----------------------------HHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhh
Q 018940 253 --------------YQ-----------------------------VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA 289 (348)
Q Consensus 253 --------------~~-----------------------------~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 289 (348)
+. +.+..+...........++|.|++++.|.+..+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g 314 (496)
T PRK03893 235 AALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVA 314 (496)
T ss_pred HHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHH
Confidence 00 00000000011113457899999888899887777
Q ss_pred HHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHH
Q 018940 290 LVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGA 332 (348)
Q Consensus 290 ~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~ 332 (348)
.......++.+++.++.+++ ||+|+| +.+..+..+..+..+
T Consensus 315 ~~~~~~~~~~~~g~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~ 356 (496)
T PRK03893 315 NVLFFSGFGAAVGCCVGGFLGDWLGTR--KAYVCSLLISQLLII 356 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHH
Confidence 77777778889999999998 999999 777766655555443
No 75
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.83 E-value=1.4e-19 Score=168.01 Aligned_cols=315 Identities=12% Similarity=0.058 Sum_probs=229.6
Q ss_pred CCCCCCCCCCchHhhHHhhhhhHHHHHHHHHH-HHHHHHHHhh-CC---C----hhHHHHHHHHHHHHHHhhhhhhHhhh
Q 018940 13 NDDSFTQPVGRWSVLYYGSGHMLNDITAACWF-TYLLLFLTDI-GL---S----PRGAAAVMLSGQIADGFATIFIGELI 83 (348)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~l~~~~~~~-g~---s----~~~~g~i~~~~~i~~~i~~p~~G~l~ 83 (348)
++++..++...+....|.+.+.+.+....++. .+.|+|+++. +. + ....|...+++.+..++..|+.|.++
T Consensus 3 ~~~~~~~~~~~~~~~sWilyD~~~~p~~~ivtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~ia 82 (438)
T COG2270 3 GPMRSRMPKLRKGIKSWILYDWGSSPFFAIVTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIA 82 (438)
T ss_pred chhhhhcccccccceeEEEeeccCCceeeeeeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 44555455555666788888888777765554 5678899874 22 3 35668899999999999999999999
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchh
Q 018940 84 DRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVV 163 (348)
Q Consensus 84 Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~ 163 (348)
|+.|+||+++.....+..++...+++ .| ..+.++..+.+ .++..+++...++.++++.+++++ +++-++
T Consensus 83 D~~g~Rk~~~~~f~~i~i~~~~~L~~--i~-----~~s~~~~~l~~---~il~~i~~~~s~Vfyds~L~~~~~-k~~~~r 151 (438)
T COG2270 83 DYPGPRKKFFGFFTAIGIISTFLLWF--IP-----PGSYLLLLLLF---LILASIGFEFSNVFYDSMLPRLTT-KDNMGR 151 (438)
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHH--hC-----CCchHHHHHHH---HHHHHHhcchhheehhhHhhhhcC-ccccCc
Confidence 99999999987777776777666664 34 11233222221 236778888889999999999884 455677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--c-------CCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cc
Q 018940 164 LTSCRNAFTMVANLSLYAIAFIVFSVS--T-------AKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM-GL 233 (348)
Q Consensus 164 ~~~~~~~~~~ig~~~~~~~~~~~~~~~--~-------~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~-~~ 233 (348)
.++..+..+.+|+.+...........- . +.+.+ +...-|..+.++++..++..+-.+..+||.++.. ++
T Consensus 152 iS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~ 230 (438)
T COG2270 152 ISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPA-DGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPP 230 (438)
T ss_pred ccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcc-ccccchhHHHHHHHHHHHHHhHHHhcccccccccccc
Confidence 777777777788776554432211110 0 00011 2345688888898888888888888888865322 11
Q ss_pred -----cCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHH
Q 018940 234 -----RGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQE 308 (348)
Q Consensus 234 -----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 308 (348)
+.-++.++++|++.+++......+..++.+-+.++..+.-..|-.+++|++..+..++.....+.+++|+++.|+
T Consensus 231 ~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~ 310 (438)
T COG2270 231 PTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGF 310 (438)
T ss_pred hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112344567788888888888888888888899999999999999999999988888888888999999999999
Q ss_pred H-HHhhhhhhHHHHHHHHHHHHHHHhHhhccCCc
Q 018940 309 M-AWTGQRLKAYYSAGGVLWVFCGAGILILPMNM 341 (348)
Q Consensus 309 l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~~~~ 341 (348)
+ +|+|.| +++..++++..+.++-.++.....
T Consensus 311 Ld~rfg~k--~vl~~~lvi~~~~~~~~~~~~~~~ 342 (438)
T COG2270 311 LDERFGSK--PVLMIGLVILSIAALYLIFLEGEL 342 (438)
T ss_pred HHHHhCCc--eeehHHHHHHHHHHHHHHHccccH
Confidence 9 999999 999999998888887777765443
No 76
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.83 E-value=1.6e-18 Score=169.37 Aligned_cols=240 Identities=11% Similarity=0.111 Sum_probs=174.2
Q ss_pred hhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHH
Q 018940 53 DIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVF 132 (348)
Q Consensus 53 ~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 132 (348)
|.++++.+.|.+.+...+...+++++.|+++||+||||.+. .+.+...+...+... . ...+.... .+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~-~~~~~~~~~~~~~~~---~----~~~~~~~l----~~~ 137 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIG-IGMFLSSVISIVIPW---A----AGGGIALV----VFC 137 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhH-HHHHHHHHHHHHHHH---H----HHcCchHH----HHH
Confidence 34889999999999999999999999999999999998754 455555554432210 0 01122222 222
Q ss_pred HHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchh-hHHHHHHHHHHH
Q 018940 133 AAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE-NQYRWIAYSSIF 211 (348)
Q Consensus 133 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~i~~~ 211 (348)
..+.|++.+...+...+++++..+ +++|+++.++.+.+..+|..+++.+.+.+. .. .+||+.+++.++
T Consensus 138 r~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~----------~~~~gw~~~f~i~~~ 206 (465)
T TIGR00894 138 RVIQGLAQGSVSPATHKIIVKWAP-PKERSRLLGMSTSGFQLGTFIFLPISGWLC----------ESWGGWPMIFYVFGI 206 (465)
T ss_pred HHHHHHhcccchhhHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hccCCCCeehhhhhH
Confidence 346777777777778888999885 678999999998888888887665543332 13 389999999888
Q ss_pred HHHHHHHHHHhhcccccccccc--c-----------C---CchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 018940 212 IGCCFVGIFLSRTEEPRLKMGL--R-----------G---NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAF 275 (348)
Q Consensus 212 i~~~~~ll~~~~~~e~~~~~~~--~-----------~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 275 (348)
++++..++.+...+|++...++ + + +++.+.++++.++++.++...+..++.....+...+|+|.
T Consensus 207 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ 286 (465)
T TIGR00894 207 VGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPT 286 (465)
T ss_pred HHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777766666553221100 0 0 0111234788999999888888888888888888999999
Q ss_pred HHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 276 YVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 276 yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
|+.+..|.+..+.+....+..++.+++.++.+++ ||+++|
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~ 327 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSS 327 (465)
T ss_pred HHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999988777777667778888999999998 988755
No 77
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.82 E-value=2.7e-17 Score=161.08 Aligned_cols=304 Identities=13% Similarity=0.048 Sum_probs=174.2
Q ss_pred hHhhHHhhhhhHHHHHHHHHHHHHHHHHHhh--------CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHH
Q 018940 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDI--------GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGA 95 (348)
Q Consensus 24 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~--------g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~ 95 (348)
+-.+.-.++.+........+.+..+.+.+++ +.++.+.|++.++..+..+++++++|+++||+||||.++ .
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~-~ 90 (479)
T PRK10077 12 SITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK-I 90 (479)
T ss_pred HHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-H
Confidence 3344444555444443444444444443333 788999999999999999999999999999999999865 5
Q ss_pred HHHHHHHHHHHHhcCcCCCcccC-cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHH
Q 018940 96 GSVLVAVSFSSVFGGCMPCRILS-TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMV 174 (348)
Q Consensus 96 ~~~~~~i~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~i 174 (348)
+..+.+++......+ ...+.. ..+.......+.+...+.|++.+...+...++++|..+ +++|+++.+..+.+..+
T Consensus 91 ~~~l~~i~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~-~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 91 AAVLFFISALGSAWP--EFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAP-AHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHhh--ccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCC-hhhhhHHHHHHHHHHHH
Confidence 556655554332210 000000 00111111122233346788888888888899999986 57899999998888888
Q ss_pred HHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccc---ccc-cC----------CchhH
Q 018940 175 ANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK---MGL-RG----------NSHAR 240 (348)
Q Consensus 175 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~---~~~-~~----------~~~~~ 240 (348)
|..++..++..+....... . ....|||+.+.+.++..++..+. .+++||++.. +++ ++ ..+.+
T Consensus 168 G~~~~~~~~~~~~~~~~~~-~-~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 244 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDAS-W-LNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLAT 244 (479)
T ss_pred HHHHHHHHHHHHhccCccc-c-cccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHH
Confidence 8777655433322110000 0 02458999998887777665443 5567775421 000 00 00001
Q ss_pred ---HHHHHHHHhH-----HHHHHH----HH-----HHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHH
Q 018940 241 ---ISWAYWFKKI-----LYYQVA----LV-----YMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVS 303 (348)
Q Consensus 241 ---~~~~~~~~~~-----~~~~~~----l~-----~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~ 303 (348)
+..++..+++ .++... .. .+......+....|.|.+. +..|.+............+..+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-~~~g~~~~~~~~~~~~~~~~~~i~~ 323 (479)
T PRK10077 245 QALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF-KTLGASTDIALLQTIIVGVINLTFT 323 (479)
T ss_pred HHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH-HHcCCCCchHHHHHHHHHHHHHHHH
Confidence 1112222211 111000 00 0101111222333445444 4567765544444445566778888
Q ss_pred HHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 304 ILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 304 ~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
++.+++ ||+||| +.+..+..+.+++.+.+...
T Consensus 324 ~~~g~l~dr~g~r--~~~i~~~~~~~v~~~~l~~~ 356 (479)
T PRK10077 324 VLAIMTVDKFGRK--PLQIIGALGMAIGMFSLGTA 356 (479)
T ss_pred HHHHHHHHHhcCh--HHHHHhHHHHHHHHHHHHHH
Confidence 989987 999999 88888888888877665443
No 78
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.81 E-value=6.6e-17 Score=164.54 Aligned_cols=170 Identities=13% Similarity=-0.028 Sum_probs=114.9
Q ss_pred HHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccc
Q 018940 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (348)
Q Consensus 43 ~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 122 (348)
+...+|....+.|++..+.|++.++..+..+++++++|+++||+|||+.++ .+.++.+++..+... .+ +.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~li-i~lil~~i~~ll~af--a~-------s~ 255 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLL-ICLSVNGFFAFFSSF--VQ-------GY 255 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-HHHHHHHHHHHHHHH--Hh-------hH
Confidence 334445454556999999999999999999999999999999999998865 455555544433221 11 22
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---ccchh
Q 018940 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT---HADLE 199 (348)
Q Consensus 123 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~---~~~~~ 199 (348)
....+ ...+.+++.+...+...+++.|..+ +++|++..++.+.+..+|.++++.++..++..++... .....
T Consensus 256 ~~llv----~R~l~G~g~g~~~p~~~~~isE~~p-~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~ 330 (742)
T TIGR01299 256 GFFLF----CRLLSGFGIGGAIPIVFSYFAEFLA-QEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQF 330 (742)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcccccccc
Confidence 22222 2246777777777778889999885 5789999998888888888887766555443222100 00013
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 200 NQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 200 ~g~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
.+||+.+++.++..++ .++..+++||++
T Consensus 331 ~gWR~l~~i~~lp~ll-~ll~~~~lPESP 358 (742)
T TIGR01299 331 HSWRVFVIVCAFPCVF-AIGALTFMPESP 358 (742)
T ss_pred ccHHHHHHHHHHHHHH-HHHHHHHcCCCH
Confidence 4799988877665544 455566788863
No 79
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.80 E-value=2.4e-17 Score=159.87 Aligned_cols=257 Identities=15% Similarity=0.077 Sum_probs=154.9
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHH
Q 018940 56 LSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAI 135 (348)
Q Consensus 56 ~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 135 (348)
.+..+.|++.++..+..++++|++|+++||+||||.++ .+..+.+++..+... .+ ...+.+...+. ..+
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~-~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~----r~l 136 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL-IIALLFVIGAILMGL--AA----FALSVEMLIVG----RVL 136 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH-HHHHHHHHHHHHHHH--hc----cccchHHHHHH----HHH
Confidence 45899999999999999999999999999999988764 566666666543321 11 11121122222 236
Q ss_pred HHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHH
Q 018940 136 FNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCC 215 (348)
Q Consensus 136 ~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~ 215 (348)
.+++.+.......++++|..+ +++|++..++.+.+..+|..+++.+. ...... ....+||+.+.+.++..++
T Consensus 137 ~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~~~--~~~~~~-----~~~~~w~~~f~~~~~~~~~ 208 (481)
T TIGR00879 137 LGIGVGIASALVPMYLSEIAP-KALRGALTSLYQLAITFGILVAYGFG--SGKVSL-----NNTLGWRIPLGLQLIPAGL 208 (481)
T ss_pred HHhhhhHHHhHHHHHHHccCC-hhhhhhhhhHHHHHHHHHHHHHHHHH--HHhhcC-----CCCccHHHHHHHHHHHHHH
Confidence 777777777778889999885 67899999998888888887765543 000111 1246899999886554444
Q ss_pred HHHHHHhhccccccc---ccc--c-----------CC-c-hhHH------------------HHHHHHHh-----HHHHH
Q 018940 216 FVGIFLSRTEEPRLK---MGL--R-----------GN-S-HARI------------------SWAYWFKK-----ILYYQ 254 (348)
Q Consensus 216 ~~ll~~~~~~e~~~~---~~~--~-----------~~-~-~~~~------------------~~~~~~~~-----~~~~~ 254 (348)
.++..+++||++.. +++ + ++ + +..+ .+++.++. +....
T Consensus 209 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (481)
T TIGR00879 209 -LFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFL 287 (481)
T ss_pred -HHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHH
Confidence 34444556664210 000 0 00 0 0000 01122221 11111
Q ss_pred H-HHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHH
Q 018940 255 V-ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGA 332 (348)
Q Consensus 255 ~-~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~ 332 (348)
. .+..+......+....|.| ++.++.|.+..+.+.......++.+++.++.+++ ||+||| +.+..++++.+++.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~~~~ 364 (481)
T TIGR00879 288 GVVLQWFQQFTGINAIMYYSP-TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR--PLLLIGAAGMAICLF 364 (481)
T ss_pred HHHHHHHHHHhCCeehHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHH
Confidence 1 1222222222233344445 4445568877655556566667788899989988 999999 877777777777665
Q ss_pred hHh
Q 018940 333 GIL 335 (348)
Q Consensus 333 ~~~ 335 (348)
.+.
T Consensus 365 ~~~ 367 (481)
T TIGR00879 365 VLG 367 (481)
T ss_pred HHH
Confidence 554
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.80 E-value=3.4e-17 Score=176.57 Aligned_cols=297 Identities=12% Similarity=-0.045 Sum_probs=181.6
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHH-HhhCC--ChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHH
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFL-TDIGL--SPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVA 101 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~-~~~g~--s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~ 101 (348)
+...+.+..+...+........+..++ .+.+. +....+++.++..+...+++|++|+++||+||||.++ .+..+.+
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~-~~~~~~~ 88 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIR-IVKLFEV 88 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHH-HHHHHHH
Confidence 333444444454444433333333333 33444 4556799999999999999999999999999998865 4443333
Q ss_pred HHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHH
Q 018940 102 VSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYA 181 (348)
Q Consensus 102 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~ 181 (348)
+...+... .. ...+.+.. .+..++.+++.+...++..++++++.+ +++|+++.++.+.+..+|.++++.
T Consensus 89 ~~~~~~~~--~~----~~~~~~~l----~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 89 GLTLLIVL--AY----YLGWFWLA----FAVTFLLGAQSAIYSPAKYGIIPELVG-KENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred HHHHHHHH--HH----HHccHHHH----HHHHHHHHHHHHhhchHHHhhhHHhcC-cccchhhhhHHHHHHHHHHHHHHH
Confidence 33221110 00 01122222 222236777778777888899999985 578999999999999999888887
Q ss_pred HHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc---cC----CchhHHHHHHHHHhHHHHH
Q 018940 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL---RG----NSHARISWAYWFKKILYYQ 254 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~ 254 (348)
+++.+.......+ .+...+|++.+.+.++...+..++..+..||.+....+ ++ ....++.++.++++|.++.
T Consensus 158 l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 236 (1146)
T PRK08633 158 LFSFLFESVNGNT-PSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWL 236 (1146)
T ss_pred HHHHHHHhhcccc-ccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHH
Confidence 7666654311000 00011334443333333333333444455664322111 11 1123445677888888776
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhcccccch-hhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHH
Q 018940 255 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQS-AKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGA 332 (348)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~ 332 (348)
..+...+..........++|.|+.+..|.+.. ..+++.....++.+++.++.+++ ||++++ +.+.++.++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~--~~~~~~~~~~~~~~~ 314 (1146)
T PRK08633 237 AIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL--GLVPLGALGLALSLF 314 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc--cchhHHHHHHHHHHH
Confidence 66655555566667778999999999999877 66766666777888888888887 888877 666666666665554
Q ss_pred hHhh
Q 018940 333 GILI 336 (348)
Q Consensus 333 ~~~~ 336 (348)
.+.+
T Consensus 315 ~~~~ 318 (1146)
T PRK08633 315 LLPT 318 (1146)
T ss_pred HHHH
Confidence 4443
No 81
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.7e-17 Score=160.88 Aligned_cols=265 Identities=11% Similarity=0.065 Sum_probs=198.3
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHH
Q 018940 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (348)
Q Consensus 55 g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 134 (348)
+.|..+-|++.+.......+++.+.|+++||+|-||++. .+.+..+++..+ +|.. ...+.... .+..+
T Consensus 69 ~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~-~~~~~sa~~t~l-----~P~a--a~~~~~~~----~~~R~ 136 (466)
T KOG2532|consen 69 DWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFF-ISGLISALLTLL-----TPLA--ASIGFYLL----LVLRF 136 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHH-HHHHHHHHHHHH-----HHHH--HHhcchhh----HHHHH
Confidence 678899999999999999999999999999999999865 455555555432 2421 11222222 22334
Q ss_pred HHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHH
Q 018940 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (348)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~ 214 (348)
+.|++.+...++...+....+| ++||++..++...+..+|.++...++ +.+.. ...||+++|++.+++++
T Consensus 137 lqGl~~g~~~pa~~~i~~~W~P-~~Ers~~~ail~~g~q~g~v~~mp~s----g~lc~-----s~~GW~sifY~~g~~g~ 206 (466)
T KOG2532|consen 137 LQGLGQGVLFPAIGSILAKWAP-PNERSTFIAILTAGSQLGTIITMPVS----GLLCE-----SSLGWPSIFYVFGIVGL 206 (466)
T ss_pred HhHHHHhHHHhhhhceeeeECC-HHHHHHHHHHHHHHHHHHHHHHHHhH----HHHhc-----cCCCCchHHHHHHHHHH
Confidence 7788888888888888888885 78999999999989888877754443 33331 24699999999999999
Q ss_pred HHHHHHHhhccccccccc-----c-------cC----CchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Q 018940 215 CFVGIFLSRTEEPRLKMG-----L-------RG----NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVI 278 (348)
Q Consensus 215 ~~~ll~~~~~~e~~~~~~-----~-------~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~ 278 (348)
++.++.+++..|++.+.+ | +. +++.+.+++++++++.+|.+.+..++.+.+.+....|.|+|+.
T Consensus 207 i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~ 286 (466)
T KOG2532|consen 207 IWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLK 286 (466)
T ss_pred HHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999998888776433211 0 00 1112457999999999999999999999999999999999999
Q ss_pred hcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhh------hH-HHHHHHHHHHHHHHhHhhccCCc
Q 018940 279 NDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRL------KA-YYSAGGVLWVFCGAGILILPMNM 341 (348)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~------k~-~~~~g~~l~~v~~~~~~~~~~~~ 341 (348)
|.+|++..+.+++..+..+...+..++.+.+ ||+-+|. +| .=.++....++..+.+.+.+.+.
T Consensus 287 ~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~ 357 (466)
T KOG2532|consen 287 EVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEH 357 (466)
T ss_pred HHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCc
Confidence 9999999988988888888889999889987 8876631 23 33444555666666666666444
No 82
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.80 E-value=5.3e-18 Score=171.22 Aligned_cols=287 Identities=9% Similarity=0.018 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccC---
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS--- 118 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~--- 118 (348)
....-++..-++++++..+.|++.+.+.+..++..++.|+++||.||||. +..+.++++++..+.. +|..+..
T Consensus 51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~-i~~g~ll~~lg~ll~a---lphf~~~~y~ 126 (633)
T TIGR00805 51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIV-IGIGCAIMGLGSFLLS---LPHFLSGRYS 126 (633)
T ss_pred HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceE-EEecHHHHHHHHHHHh---ChHHhcCCcc
Confidence 33344444444569999999999999999999999999999999999875 5678888888875433 2310000
Q ss_pred ---------------------c-----------------ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCccc
Q 018940 119 ---------------------T-----------------STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTS 160 (348)
Q Consensus 119 ---------------------~-----------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 160 (348)
. .+.......+.+..++.|+|.+...+...+++.|..+ +++
T Consensus 127 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~-~~~ 205 (633)
T TIGR00805 127 YSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAK-SKN 205 (633)
T ss_pred ccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCC-ccc
Confidence 0 0000011122233356777777777777789999885 678
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc----------ccchh--hHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 161 RVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT----------HADLE--NQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 161 R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~----------~~~~~--~g~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
|++..++.+.+..+|..++..+++.+...+.+.. ..|.. -+|+..|++.++++++.++..+++.++.+
T Consensus 206 ~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp 285 (633)
T TIGR00805 206 SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALP 285 (633)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccC
Confidence 9999999999999998888877766665432100 01111 14888888888888777665544333321
Q ss_pred cc---cc----cc------CC----------chhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccc
Q 018940 229 LK---MG----LR------GN----------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQ 285 (348)
Q Consensus 229 ~~---~~----~~------~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~ 285 (348)
.+ .+ ++ ++ ++..+.++.+++||.++...+..++.....++..+|+|.|++++.|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~ 365 (633)
T TIGR00805 286 KEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISS 365 (633)
T ss_pred CcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 11 00 00 00 0112345778999998888888888888889999999999999999998
Q ss_pred hhhhHHhHHHHH-HHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHh
Q 018940 286 SAKALVPAIIYI-CSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAG 333 (348)
Q Consensus 286 ~~~~~~~~~~~~-~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~ 333 (348)
.+.+++.....+ +.++|.++.+++ ||++.+.|+....++++.+++.+.
T Consensus 366 ~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 366 AEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 877765544443 457888999997 999977667888887777766533
No 83
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.79 E-value=5.5e-17 Score=158.31 Aligned_cols=244 Identities=11% Similarity=-0.068 Sum_probs=158.8
Q ss_pred HHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccc
Q 018940 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (348)
Q Consensus 43 ~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 122 (348)
...+++.+.++.|.|..+.+++.+...+...+..|+.|+++||+||||.+ +.+.....++...... . .+.
T Consensus 38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l-~~~~~~~~~~~~~~~~-------~--~~~ 107 (455)
T TIGR00892 38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV-IAGGLLASLGMILASF-------S--SNV 107 (455)
T ss_pred hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH-HhhHHHHHHHHHHHHH-------h--hhH
Confidence 34556666666799999999999999999999999999999999999875 4566555555543211 1 122
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHH
Q 018940 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQY 202 (348)
Q Consensus 123 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~ 202 (348)
........ .+.+++.+....+..+.+.+.. +++|+++.++.+.+..+|..+++.+.+.+. +..||
T Consensus 108 ~~l~~~~~---~l~G~~~~~~~~~~~~~~~~~~--~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~----------~~~gw 172 (455)
T TIGR00892 108 IELYLTAG---FITGLGLAFNFQPSLTMLGKYF--YRRRPLANGLAMAGSPVFLSTLAPLNQYLF----------ESFGW 172 (455)
T ss_pred HHHHHHHH---HHHHhcchhhhhHHHHHHHHHH--HhhHHHHHHHHHhcccHHHHHHHHHHHHHH----------HHhCh
Confidence 22211111 2445666655456666777765 368999999988888888776654443332 24589
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccc----ccc--c----c--CCc----h---hHHHH--HHHHHhHHHHHHHHHHHH
Q 018940 203 RWIAYSSIFIGCCFVGIFLSRTEEPRL----KMG--L----R--GNS----H---ARISW--AYWFKKILYYQVALVYML 261 (348)
Q Consensus 203 ~~~~~i~~~i~~~~~ll~~~~~~e~~~----~~~--~----~--~~~----~---~~~~~--~~~~~~~~~~~~~l~~~~ 261 (348)
|+.+++.+++.++..+..++..++++. +.+ + + .++ . ....+ .+.+++|.++...+..++
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVI 252 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHH
Confidence 999999888776655544444432211 000 0 0 000 0 00011 146788888776666666
Q ss_pred HHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHh
Q 018940 262 TRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWT 312 (348)
Q Consensus 262 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~ 312 (348)
..........|+|.|.++ .|.+..+.+....+..++.+++.++.+++ ||.
T Consensus 253 ~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 253 MFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 666777778899999876 58887777766666677778888888887 763
No 84
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.78 E-value=3.4e-16 Score=154.14 Aligned_cols=297 Identities=15% Similarity=0.089 Sum_probs=195.9
Q ss_pred CCCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHH
Q 018940 19 QPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSV 98 (348)
Q Consensus 19 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~ 98 (348)
.+++-+....+..+++..++...+...-++.+..+..-|+..+|++.....+...+.+++.|.++||+.|||.++. +-+
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~-~~~ 83 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILIL-SQL 83 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH-HHH
Confidence 4455555555556666666666666555666666777889999999999999999999999999999999998654 443
Q ss_pred HHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHH
Q 018940 99 LVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLS 178 (348)
Q Consensus 99 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~ 178 (348)
..++....+.. .. .....+.+ ..+. +.++.+.+.+...++.++.++++.+ +||-.+++++.+...+++.++
T Consensus 84 ~~~~~~~~L~~--l~--~~~~~~~~-~Ll~---~~fl~g~~~a~~~PA~~A~ip~lV~-~~~L~~A~al~s~~~niar~i 154 (524)
T PF05977_consen 84 LRALVALLLAV--LA--FFGLLSPW-LLLI---LTFLLGIGSAFFNPAWQAIIPELVP-KEDLPAANALNSISFNIARII 154 (524)
T ss_pred HHHHHHHHHHH--HH--HhCcCCHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHhcc-HhhHHHHHHHHHHHHHHHHhc
Confidence 33332221110 00 01112222 2222 2246778888888899999999985 567788888888888888888
Q ss_pred HHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccc-cc--CCchhHHHHHHHHHhHHHHHH
Q 018940 179 LYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-LR--GNSHARISWAYWFKKILYYQV 255 (348)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 255 (348)
++.+++.++..+ |-.+.|.+.++ +.+..+......|.+..+++ ++ -.++.++.++.+.+||.++.+
T Consensus 155 GPalgG~Lva~~----------G~~~~f~inal-sfl~~i~~l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~ 223 (524)
T PF05977_consen 155 GPALGGILVAFF----------GAAAAFLINAL-SFLISILALLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSV 223 (524)
T ss_pred cchHHHHHHHHH----------HHHHHHHHHHH-HHHHHHHHHHHccccccccccchhhhhhhHHHHHHHHhcchHHHHH
Confidence 887777776543 33445555433 33333333333333221111 11 123455667777778877665
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhH
Q 018940 256 ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGI 334 (348)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~ 334 (348)
.+..++.+.........+|.+..+.+|.++...+++..+.++++++|+++.+++ +|++++ +.+..+.++.+++++.+
T Consensus 224 l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~--~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 224 LLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR--RLVLLASLLFALALLLL 301 (524)
T ss_pred HHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc--hhhHHHHHHHHHHHHHH
Confidence 554444444444556678999999999988777777777888999999999988 777776 77788888777777666
Q ss_pred hhcc
Q 018940 335 LILP 338 (348)
Q Consensus 335 ~~~~ 338 (348)
.+.+
T Consensus 302 al~~ 305 (524)
T PF05977_consen 302 ALSP 305 (524)
T ss_pred hcch
Confidence 5543
No 85
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.78 E-value=5.4e-16 Score=153.15 Aligned_cols=267 Identities=13% Similarity=0.088 Sum_probs=159.6
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHH
Q 018940 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (348)
Q Consensus 55 g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 134 (348)
+.+..+.+++.+...+...++++++|+++||+|||+.++ .+.+...++..+... .+ ...+.. ....+.+...
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~-~~~~~~~v~~~~~~~--~~----~~~~~~-~~~~~~~~r~ 123 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG-MELIIMIIATVASGL--SP----GSSPKS-VMATLCFWRF 123 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH-HHHHHHHHHHHHHHH--cc----Ccccch-HHHHHHHHHH
Confidence 356678899999999999999999999999999998764 555555555543321 12 001110 0111222334
Q ss_pred HHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccC----Ccc-c--------chhhH
Q 018940 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA----KTH-A--------DLENQ 201 (348)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~----~~~-~--------~~~~g 201 (348)
+.|++.+....+...++.|..| +++|++..++.+....+|..++..+...+...+.. ..+ + ..+.+
T Consensus 124 l~G~~~g~~~~~~~~~~~e~~p-~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (502)
T TIGR00887 124 WLGVGIGGDYPLSAIITSEFAT-KKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYM 202 (502)
T ss_pred HHHHHHhhhhHHHHHHHHHhcC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhccc
Confidence 6778888877788899999985 68999999999888888888877665544332211 000 0 01247
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccc-----cccc----------------CC----------chhHHHHHHHHHhH
Q 018940 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRLK-----MGLR----------------GN----------SHARISWAYWFKKI 250 (348)
Q Consensus 202 ~~~~~~i~~~i~~~~~ll~~~~~~e~~~~-----~~~~----------------~~----------~~~~~~~~~~~~~~ 250 (348)
||+.+.+.++.+++ ..+..+++||+++. ++++ ++ ++.+.+++++++++
T Consensus 203 WR~~~~~~~ip~~i-~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 281 (502)
T TIGR00887 203 WRILIGFGAVPALL-ALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHF 281 (502)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHH
Confidence 99999766555544 44455678886320 1000 00 00112466676532
Q ss_pred ---HH-HHH---HHHHHHHHHHHHhhhHHHHHHHhhcccccchhhh-----------H-HhHHHHHHHHHHHHHHHHH-H
Q 018940 251 ---LY-YQV---ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA-----------L-VPAIIYICSFIVSILLQEM-A 310 (348)
Q Consensus 251 ---~~-~~~---~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~-----------~-~~~~~~~~~i~g~~~~~~l-~ 310 (348)
+. +.. ....+......++...|.|.++++ .|++....+ . ...+..++.+++.++.+++ |
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~d 360 (502)
T TIGR00887 282 FKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVD 360 (502)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22 211 122333344556677788888864 566532110 0 1222334556677888887 9
Q ss_pred HhhhhhhHHHHHHHHHHHHHHHhH
Q 018940 311 WTGQRLKAYYSAGGVLWVFCGAGI 334 (348)
Q Consensus 311 r~g~r~k~~~~~g~~l~~v~~~~~ 334 (348)
|+||| +.+..+.++..+++..+
T Consensus 361 r~gRR--~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 361 IIGRK--PIQLMGFFILTVLFFVL 382 (502)
T ss_pred hhcch--hHHHHHHHHHHHHHHHH
Confidence 99999 77777766655554433
No 86
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.78 E-value=3.7e-16 Score=150.82 Aligned_cols=266 Identities=9% Similarity=-0.007 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCC
Q 018940 36 NDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPC 114 (348)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~ 114 (348)
....+....+++++|+++. |+|..++|++.++..+...+++|++|+++||+||||+.+..+....++.......
T Consensus 14 ~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~----- 88 (418)
T TIGR00889 14 QWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ----- 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-----
Confidence 3445557779999999885 9999999999999999999999999999999987665555555555444432221
Q ss_pred cccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhh----hh----hcccCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 115 RILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSM----VN----CITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (348)
Q Consensus 115 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~----~~----~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~ 186 (348)
..+.......+. +.+++.+.......++ .. |... +..|.+..+ .+|..+++.+.+.+
T Consensus 89 ----~~~~~~~~~~~~----l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~-~~~~~r~~G------~lG~~ig~~l~g~l 153 (418)
T TIGR00889 89 ----VTTPAGMFPVLL----ANSLAYMPTIALTNSISYANLPQAGLDVVT-DFPPIRVMG------TIGFIAAMWAVSLL 153 (418)
T ss_pred ----hcCHHHHHHHHH----HHHHHHccHHHHHHHHHHHHHhhcCCCchh-cCCCeeeeh------hHHHHHHHHHHHHh
Confidence 112222222222 3334333222222222 21 2221 223444332 34444444333222
Q ss_pred HHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhH----HHHHHHHHhHHHHHHHHHHHHH
Q 018940 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHAR----ISWAYWFKKILYYQVALVYMLT 262 (348)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~ 262 (348)
. ....|+. +++.+++.++..++ .+.+||+++++++ ++.+.+ ...++++|||+++.+.+..++.
T Consensus 154 ----~------~~~~~~~-f~~~~~~~~~~~~~-~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 220 (418)
T TIGR00889 154 ----D------IELSNIQ-LYITAGSSALLGVF-ALTLPDIPVAKST-AKMSIKVMLGLDAFILFKNKRMAIFFFFSMLL 220 (418)
T ss_pred ----c------ccchhHH-HHHHHHHHHHHHHH-HhcCCCCCCCccc-cccCHHHHhhhhHHHHhcCCCeeeHHHHHHHH
Confidence 1 1123433 44555555554443 4567775322211 111111 1235678888877666666665
Q ss_pred HHHHHhhhHHHHHHHhhccccc--------chhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHh
Q 018940 263 RLVVNVSQAYLAFYVINDLRMG--------QSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAG 333 (348)
Q Consensus 263 ~~~~~~~~~~~~~yl~~~~~~~--------~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~ 333 (348)
.........+++.|+++. +.+ .++.+....+..+..+++.+..+++ ||+|+| +.+..+.++..++...
T Consensus 221 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r--~~l~~~~~~~~v~~~l 297 (418)
T TIGR00889 221 GAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK--KVMLLSLVAWALRFGF 297 (418)
T ss_pred HhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHH
Confidence 555556667888888764 322 2344555555566777788888887 999999 8899998888887655
Q ss_pred Hhhc
Q 018940 334 ILIL 337 (348)
Q Consensus 334 ~~~~ 337 (348)
+...
T Consensus 298 ~~~~ 301 (418)
T TIGR00889 298 FAYG 301 (418)
T ss_pred HHHc
Confidence 5543
No 87
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.77 E-value=1.7e-16 Score=171.22 Aligned_cols=247 Identities=12% Similarity=-0.035 Sum_probs=165.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHH--HHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHH
Q 018940 58 PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHG--AGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAI 135 (348)
Q Consensus 58 ~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~--~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 135 (348)
....++..+++.+..++++|+.|+++||+||||.+.. ...+.........+. ..+.+..++ ..++
T Consensus 51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~---------~~s~~~l~~----~~~l 117 (1140)
T PRK06814 51 NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFH---------LNSVPLLFA----ALFL 117 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH---------HhhHHHHHH----HHHH
Confidence 3567888889999999999999999999999986432 111111111111110 012332222 2246
Q ss_pred HHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHH
Q 018940 136 FNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCC 215 (348)
Q Consensus 136 ~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~ 215 (348)
.+++.+...+...++++++.+ +++|++++++.+.+.++|.++++.+++.++. ..+|++.+...++.. +
T Consensus 118 ~gi~~a~~~p~~~a~l~~~~~-~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~----------~~~~~~~~~~~~~~~-~ 185 (1140)
T PRK06814 118 MGIHSALFGPIKYSILPDHLN-KDELLGANALVEAGTFIAILLGTIIGGLATI----------SGNFVILVALLMGIA-V 185 (1140)
T ss_pred HHHHHHhhchHHHHhhHhhcC-ccccchhhHHHHHHHHHHHHHHHHHHHHHHh----------ccccHHHHHHHHHHH-H
Confidence 778888888888999999985 5789999999999999999988777666553 347888774443333 3
Q ss_pred HHHHHHhhcccccccccc-cCC----chhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhH
Q 018940 216 FVGIFLSRTEEPRLKMGL-RGN----SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKAL 290 (348)
Q Consensus 216 ~~ll~~~~~~e~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 290 (348)
..++..+.++|++...+. +.+ ++..+.++.+.+||.++...+..++.+.......+++|.|+++..|.+....+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~ 265 (1140)
T PRK06814 186 LGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATL 265 (1140)
T ss_pred HHHHHHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHH
Confidence 344444556654322111 111 122345778889999888777777776777778889999999999998877777
Q ss_pred HhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 291 VPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 291 ~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
+.....+++++|+++.+++ +|.+++ +.+..+.++..++.
T Consensus 266 ~~~~~~~g~~ig~~~~g~l~~~~~~~--~~~~~~~~~~~~~~ 305 (1140)
T PRK06814 266 FLAVFSVGVAVGSFLASKLSEGRITL--LYVPIGALLMGLFG 305 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceee--eeehHHHHHHHHHH
Confidence 7677778889999989887 666655 44444444433333
No 88
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.75 E-value=1.3e-15 Score=145.64 Aligned_cols=279 Identities=13% Similarity=0.044 Sum_probs=160.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCC
Q 018940 34 MLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMP 113 (348)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~ 113 (348)
+.......+..+|++.|+++.|.|+.|+|.++++..+...+++|++|.++||.+++|..+....+..++.+.....
T Consensus 12 f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~---- 87 (400)
T PF03825_consen 12 FLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF---- 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH----
Confidence 3344555677899999999999999999999999999999999999999999987666555444444444332221
Q ss_pred CcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018940 114 CRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK 193 (348)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~ 193 (348)
..+.+..+... .++.+.+....+-..++..+..+ +++......|. .+++|-++++......+....
T Consensus 88 -----~~~f~~~~~~~----~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRl-wGSiGf~~~~~~~~~~~~~~~-- 153 (400)
T PF03825_consen 88 -----SSSFWWLFVIM----LLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRL-WGSIGFIVAALAFGGLLGGYL-- 153 (400)
T ss_pred -----hccHHHHHHHH----HHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchh-hhhHHHHHHHHHHHHHHHhhh--
Confidence 12233222211 23344444333333344443332 22333333442 334555444322111111111
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccc-c-cCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhH
Q 018940 194 THADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-L-RGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQA 271 (348)
Q Consensus 194 ~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 271 (348)
...+..+.+++.+....+..... +..|+.+.+++ + +.+++..+...+++|||++....+..++.+........
T Consensus 154 ----~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~ 228 (400)
T PF03825_consen 154 ----GISGTSLIFYIAAILSLLLAGFA-LFLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYT 228 (400)
T ss_pred ----ccccccHHHHHHHHHHHHHHHHH-HhCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence 11122234444444444333333 23454332111 1 11122222334789999988877777777888888899
Q ss_pred HHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 272 YLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 272 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
|.+.|++|..+.+.+..+....+..++=++.-...+++ +|+|.| +.+.++++.+++=..+....
T Consensus 229 f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~--~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 229 FFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK--WLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHh
Confidence 99999998866665544433233333334445566776 999988 89999988888777666666
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.75 E-value=2.5e-15 Score=147.77 Aligned_cols=172 Identities=10% Similarity=-0.065 Sum_probs=121.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc-cCCchHHHHHHHHHHHHHHHHH
Q 018940 30 GSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSSV 107 (348)
Q Consensus 30 ~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr-~Grrr~~i~~~~~~~~i~~~~l 107 (348)
.+..+.....++.+.++++.|+++. |.+..+.+++...+.....+..++.|+++|| +||||.++ .+.+..+++...+
T Consensus 20 ~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~-~g~~~~~~g~~~~ 98 (489)
T PRK10207 20 FFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIV-LGAIVLAIGYFMT 98 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHH-HHHHHHHHHHHHH
Confidence 3455667777888889999999875 9999999999999999999999999999999 99999864 6777777776554
Q ss_pred hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc-cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST-SRVVLTSCRNAFTMVANLSLYAIAFIV 186 (348)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~R~~~~~~~~~~~~ig~~~~~~~~~~~ 186 (348)
+. + . .......+.+ .+.++|.+...++..+++.|..++++ +|++..++.+.+.++|..+++.+++.+
T Consensus 99 ~~---~----~-~~~~ll~~~~----~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l 166 (489)
T PRK10207 99 GM---S----L-LKPDLIFIAL----GTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVI 166 (489)
T ss_pred HH---h----c-cchhHHHHHH----HHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 42 1 1 1111111111 24567777777777789999886544 446778888889999988877665444
Q ss_pred HHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018940 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTE 225 (348)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~ 225 (348)
. +..|||+.|++.++ +++..++.+...+
T Consensus 167 ~----------~~~gw~~~F~i~~i-~~~~~~~~~~~~~ 194 (489)
T PRK10207 167 A----------DKFGYSVTYNLCGA-GLIIALLVYFACR 194 (489)
T ss_pred H----------HhhChHHHHHHHHH-HHHHHHHHHHHcc
Confidence 3 23589999987643 4444444444444
No 90
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=5.4e-20 Score=159.31 Aligned_cols=280 Identities=47% Similarity=0.851 Sum_probs=200.6
Q ss_pred CCCCCCCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhc---------c
Q 018940 15 DSFTQPVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELID---------R 85 (348)
Q Consensus 15 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~D---------r 85 (348)
|..+||++.+++++|+.|++.+++..+++.+|+..|++++|+++...+.++.++.+.+++..|+.|..+| |
T Consensus 8 DPstkPigr~svf~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr 87 (412)
T KOG4830|consen 8 DPSTKPIGRTSVFAYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDR 87 (412)
T ss_pred CCCCCcccceeeeeechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhh
Confidence 3468899999999999999999999999999999999999999999999999999999999999996665 8
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHH
Q 018940 86 FGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLT 165 (348)
Q Consensus 86 ~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~ 165 (348)
+|||+.|-..|.++..+++...|.+ .. ++..+.+. .
T Consensus 88 ~G~~~~wh~~gt~lVslSf~~ifg~---------a~-------------iF~~~~~~---------------s------- 123 (412)
T KOG4830|consen 88 IGRRMSWHLIGTVLVSLSFPMIFGF---------AK-------------IFLCKSTT---------------S------- 123 (412)
T ss_pred hcceeeeeecccEEEEEechhhcCc---------ee-------------EEeeccHH---------------H-------
Confidence 9999999887766655554333210 00 00000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCC-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHH
Q 018940 166 SCRNAFTMVANLSLYAIAFIVFSVSTAK-THADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWA 244 (348)
Q Consensus 166 ~~~~~~~~ig~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~ 244 (348)
-+.+ +|-.. +...+++ ++.. ...+.+..+||..+...++++..+.+...+++||+..-..++.+..+-+|.
T Consensus 124 ~van----lglya---ialvVFg-v~~A~~ke~tea~~R~~~~~~v~lG~~~~~vF~~~TrEP~~~~~~~~s~~~Rm~W~ 195 (412)
T KOG4830|consen 124 EVAN----LGLYA---IALVVFG-VGWASVKESTEALIRLAGWLVVVLGITVAFVFYAFTREPTNSFSSDASELVRMHWT 195 (412)
T ss_pred HHHH----hHHHH---HHhheee-eeeecccccHHHHHHHhhhheeeeceeEEEEEeecccCcccccCcchhhhhcccch
Confidence 0111 11110 0000111 0110 011234456777666656676666677777888764322233333445688
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 018940 245 YWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGG 324 (348)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~r~g~r~k~~~~~g~ 324 (348)
..|++-.++++.+.+++.....+..+.|+++|+.++++++.+..++++.+.+++++..+.+-..+..=|+|.|..+..|.
T Consensus 196 ~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGg 275 (412)
T KOG4830|consen 196 SWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGG 275 (412)
T ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeeccc
Confidence 88999999999999999999999999999999999999998888899999999999888766544333444347788999
Q ss_pred HHHHHHHHhHhhccCCceeeee
Q 018940 325 VLWVFCGAGILILPMNMSAFML 346 (348)
Q Consensus 325 ~l~~v~~~~~~~~~~~~~~~~~ 346 (348)
+.++.+++.+...|++-...||
T Consensus 276 iiwifcga~ilLlpr~i~symy 297 (412)
T KOG4830|consen 276 IIWIFCGAVILLLPRGIKSYMY 297 (412)
T ss_pred HHHHHhhhheeecccchHHHHH
Confidence 9999999999999988665544
No 91
>TIGR00898 2A0119 cation transport protein.
Probab=99.74 E-value=6.9e-16 Score=152.31 Aligned_cols=257 Identities=15% Similarity=0.108 Sum_probs=161.3
Q ss_pred HHHHhhCCC---hhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhH
Q 018940 49 LFLTDIGLS---PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVE 125 (348)
Q Consensus 49 ~~~~~~g~s---~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 125 (348)
...+|.|++ +.+.|++.++..+..++++++.|+++||+||||.++ .+.+..+++...... . .+....
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~-~~~~~~~i~~~~~~~--~-------~~~~~~ 183 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLL-LSTLVTAVSGVLTAF--S-------PNYTVF 183 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHH-HHHHHHHHHHHHHHH--c-------ccHHHH
Confidence 333445888 899999999999999999999999999999998764 566665555543321 1 133322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHH
Q 018940 126 TISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWI 205 (348)
Q Consensus 126 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 205 (348)
.+. ..+.|++.+.......+++.|..+ +++|++..+....+..+|.++++. ++.+ ..+||+.
T Consensus 184 ~~~----r~l~G~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~~~~~-----~~~~--------~~~wr~~ 245 (505)
T TIGR00898 184 LVF----RLLVGMGIGGIWVQAVVLNTEFLP-KKQRAIVGTLIQVFFSLGLVLLPL-----VAYF--------IPDWRWL 245 (505)
T ss_pred HHH----HHHHHhhccchHHHHHHHhheecC-hhhhHHHHHHHHHHHHHHHHHHHH-----HHHH--------hhHHHHH
Confidence 222 236777777777778888999885 578998888877776666655433 3222 1249999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccc---ccc----------------------------cCC---chhHHHHHHHHHhHH
Q 018940 206 AYSSIFIGCCFVGIFLSRTEEPRLK---MGL----------------------------RGN---SHARISWAYWFKKIL 251 (348)
Q Consensus 206 ~~i~~~i~~~~~ll~~~~~~e~~~~---~~~----------------------------~~~---~~~~~~~~~~~~~~~ 251 (348)
+++.+++.++..+.. +++||++.. +++ +++ ++.+..+++++++|.
T Consensus 246 ~~~~~i~~~~~~~~~-~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 324 (505)
T TIGR00898 246 QLAVSLPTFLFFLLS-WFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPN 324 (505)
T ss_pred HHHHHHHHHHHHHHH-HhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChH
Confidence 988877776665554 567774320 000 000 000124567888888
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHH
Q 018940 252 YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFC 330 (348)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~ 330 (348)
++...+...+.+...... .|...+..+..+.+.. ....+..+..+++.++.+++ ||+||| +.+..+.++.+++
T Consensus 325 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr--~~~~~~~~~~~~~ 398 (505)
T TIGR00898 325 LRKTTLCLMMLWFTTAFS-YYGLVLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRR--YTMAASLLLAGVA 398 (505)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHhccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHH
Confidence 776554443333332221 1222222333343322 22233445667788888887 999999 8888888888888
Q ss_pred HHhHhhccCC
Q 018940 331 GAGILILPMN 340 (348)
Q Consensus 331 ~~~~~~~~~~ 340 (348)
++.+.+.+.+
T Consensus 399 ~l~~~~~~~~ 408 (505)
T TIGR00898 399 LLLLLFVPVD 408 (505)
T ss_pred HHHHHHcCCC
Confidence 8777776544
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.73 E-value=1e-14 Score=143.08 Aligned_cols=165 Identities=12% Similarity=-0.056 Sum_probs=119.4
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHh---hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcc-cCCchHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTD---IGLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAV 102 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~---~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr-~Grrr~~i~~~~~~~~i 102 (348)
.......+.....++.+.++++.|+++ .|+|+.++|.+.++..+...+++++.|+++|| +||||.+ ..+.+..++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l-~~~~~~~~~ 91 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM-VLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH-HHHHHHHHH
Confidence 344456677778888888999999976 59999999999999999999999999999999 8999885 467777777
Q ss_pred HHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc--cchhHHHHHHHHHHHHHHHHH
Q 018940 103 SFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST--SRVVLTSCRNAFTMVANLSLY 180 (348)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~R~~~~~~~~~~~~ig~~~~~ 180 (348)
+...+.. . .+.....+.+ .+.+++.+...++..+++++..++++ +|++..++.+...++|..+++
T Consensus 92 g~~~~~~---~------~~~~~~~~~~----~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~ 158 (475)
T TIGR00924 92 GHFMLAM---S------IYPDLIFYGL----GTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISP 158 (475)
T ss_pred HHHHHHh---c------ccHhHHHHHH----HHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHH
Confidence 7654331 1 1222121211 24566666666777788888876432 477888898899999988876
Q ss_pred HHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHH
Q 018940 181 AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCC 215 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~ 215 (348)
.+.+.+. +..+|++.|.+.++..++
T Consensus 159 ~l~g~l~----------~~~g~~~~f~~~~~~~~~ 183 (475)
T TIGR00924 159 LLAGVIA----------ENYGYHVGFNLAAVGMVI 183 (475)
T ss_pred HHHHHHH----------HhcChHHHHHHHHHHHHH
Confidence 6654432 245799999887654443
No 93
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.72 E-value=1.7e-15 Score=143.38 Aligned_cols=287 Identities=11% Similarity=0.067 Sum_probs=151.4
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHH-H
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVA-V 102 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~-i 102 (348)
+...+++..+...+.++...+|.+.|+++. |+|++++|.+.++..+...+.||+.|.++||.|.||.++..-.+... .
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~ 87 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLF 87 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHH
Confidence 445556666777777888899999999985 99999999999999999999999999999999977775543222211 1
Q ss_pred HHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccC-cccchhHHHHHHHHHHHHHHHHHH
Q 018940 103 SFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN-STSRVVLTSCRNAFTMVANLSLYA 181 (348)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~R~~~~~~~~~~~~ig~~~~~~ 181 (348)
+-+..+. +.|.. ..+.. . ..++....++..+........+++.+.++. .-|-|+ .| ..+++|.++++.
T Consensus 88 ~pff~~v-~~pll---~~n~~-l--g~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~---~R-~wGSig~ai~s~ 156 (412)
T PF01306_consen 88 GPFFIYV-FGPLL---QSNFW-L--GAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGR---AR-MWGSIGFAIASL 156 (412)
T ss_dssp HHHHHHT-HHHHH---HTT-H-H--HHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHH---HH-HHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHH---HHHHH-H--HHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcch---HH-HHhhHHHHHHHH
Confidence 1111211 01210 01111 1 111101112222333333333444333311 112223 23 233555555555
Q ss_pred HHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccccccc--c-cCCch---hHHHHHHHHHhHHHHHH
Q 018940 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG--L-RGNSH---ARISWAYWFKKILYYQV 255 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~--~-~~~~~---~~~~~~~~~~~~~~~~~ 255 (348)
+++.++.. . + ...+++....+++..++.+..-||++++.+ + ++.++ ..+...+++|+|++|.+
T Consensus 157 ~~G~L~~i-~------p----~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~ 225 (412)
T PF01306_consen 157 LAGILFNI-N------P----NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFF 225 (412)
T ss_dssp HHHHHHHH-H------H----HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHH
T ss_pred Hhheeeee-C------c----cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHH
Confidence 55665542 1 1 223333333344444444444433222111 1 11111 11234678999999987
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHhhccccc---chhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 256 ALVYMLTRLVVNVSQAYLAFYVINDLRMG---QSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~yl~~~~~~~---~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
.+........+......++.|..+..+-. .+..+....+..+.-++.-.++|++ +|+|.| +.+.++...+++=.
T Consensus 226 ~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k--~~Lllag~i~~iRi 303 (412)
T PF01306_consen 226 VLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK--NLLLLAGVIMAIRI 303 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH--hHHHHHHHHHHHHH
Confidence 77666655667777777888887654432 2223333333333445556777887 999999 87777766665544
Q ss_pred HhHh
Q 018940 332 AGIL 335 (348)
Q Consensus 332 ~~~~ 335 (348)
....
T Consensus 304 ~~~~ 307 (412)
T PF01306_consen 304 IGSG 307 (412)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4433
No 94
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.70 E-value=6.1e-17 Score=151.79 Aligned_cols=271 Identities=11% Similarity=0.035 Sum_probs=183.8
Q ss_pred CCCchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHH
Q 018940 20 PVGRWSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVL 99 (348)
Q Consensus 20 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~ 99 (348)
.-+.+.....-+.++++..--+.+-..+.--.+..|+++...|++..+..+..++.+|++|.++||+.|++.+ ..|..+
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~-~vG~~i 107 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI-AVGIFI 107 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE-eeHHHH
Confidence 3334455666666666665555554544333333499999999999999999999999999999999998875 567666
Q ss_pred HHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHH
Q 018940 100 VAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (348)
Q Consensus 100 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~ 179 (348)
..++.+..- ..+ .+..+.+...+.|+|.+.+.+...++++|+++ +++|++..++.+....+|+.++
T Consensus 108 W~~Av~~~~----------fs~---~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~-~~~Rs~~~~ify~~ipvGsglG 173 (493)
T KOG1330|consen 108 WTLAVFASG----------FSN---HFWQVLLCRGFVGIGEASYSPIAPSLIADSFP-DDKRSRVLGIFYFAIPVGSGLG 173 (493)
T ss_pred HHHHHHHHH----------HHH---HHHHHHHHHHHhccchhhhcccchhHhhhcCc-chhhhHHHHHhhhhccccccee
Confidence 666654221 111 12223334457899999988888999999995 5789999999999988887775
Q ss_pred HHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc--c-------CCchhHHHHHHHHHhH
Q 018940 180 YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL--R-------GNSHARISWAYWFKKI 250 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~--~-------~~~~~~~~~~~~~~~~ 250 (348)
...+ -.++. ....|||.+.+.+++++++.++.+++++||+.++.+ + +..+..+..|.+.|+|
T Consensus 174 ~vvg-s~va~--------~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~ 244 (493)
T KOG1330|consen 174 YVVG-SVVAS--------LTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIK 244 (493)
T ss_pred EEee-eeecc--------CccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccC
Confidence 4432 22211 123499999999999999999999999997643211 1 1122334456667777
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhhc---ccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhh
Q 018940 251 LYYQVALVYMLTRLVVNVSQAYLAFYVIND---LRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQ 314 (348)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~---~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~ 314 (348)
.+..-.+.+...++...++.-|.|.++... .|.+.....++..+..+++.+|.++++.+ ||+.+
T Consensus 245 v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~ 312 (493)
T KOG1330|consen 245 VFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSR 312 (493)
T ss_pred ceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHH
Confidence 766666666666666666555666654433 33333344456666677888888888887 77544
No 95
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.1e-13 Score=128.34 Aligned_cols=276 Identities=12% Similarity=0.063 Sum_probs=183.3
Q ss_pred HHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccch
Q 018940 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (348)
Q Consensus 45 ~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 123 (348)
-.+.+.+++. +++..+++++.......+.+.+.+.|++.+|+|+|+-. +.|..++++++.+.+ |.. ....+
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi-~lgL~l~avg~~lF~----pAa--~~~~y- 104 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI-VLGLLLYAVGAALFW----PAA--SSKSY- 104 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH-HHHHHHHHHHHHHHh----hhh--hhhhH-
Confidence 3344555565 99999999999999999999999999999999999985 578999999986544 311 11111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHh---ccCC-c-----
Q 018940 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV---STAK-T----- 194 (348)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~---~~~~-~----- 194 (348)
..+....++.+.|.+..++..+.++..+-+ +++...-.+..+.+..+|+++++.++..++.. .... +
T Consensus 105 ---~~FL~~lFila~Gi~~LetaaNp~v~~lg~-~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~ 180 (422)
T COG0738 105 ---GFFLVALFILASGIGLLETAANPYVTLLGK-PESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAI 180 (422)
T ss_pred ---HHHHHHHHHHHhhhHHHHhccchHHHHhCC-chhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHH
Confidence 112222236777788889989999988875 33445555667788888888877766555431 0000 0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCC-chhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHH
Q 018940 195 HADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN-SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYL 273 (348)
Q Consensus 195 ~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 273 (348)
.+.....+++++...+.+.+++.+.. ...|-|+.++.++++ ++.+....+++|||+++.-.+..++.-..-.....|+
T Consensus 181 ~~~~~~~v~~pYl~~~~~lvll~v~~-~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl 259 (422)
T COG0738 181 KGADASSVQFPYLILAGLLVLLAVLI-LLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFL 259 (422)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHH-HhccCCcCCcccccccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHH
Confidence 00012236777766555444443333 233322222221111 1111145789999999988888888877778889999
Q ss_pred HHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHh
Q 018940 274 AFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGIL 335 (348)
Q Consensus 274 ~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~ 335 (348)
+.|+.|..|.+..+.+.+.....++..+|-++.-++ +|+... |.+....+..++-++...
T Consensus 260 ~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~--k~Laf~a~~~ill~~~~~ 320 (422)
T COG0738 260 VSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE--KYLAFYALIAILLLLAVA 320 (422)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHH
Confidence 999999989888877777777777888888777776 999988 766666555444444433
No 96
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.69 E-value=3.9e-15 Score=144.93 Aligned_cols=264 Identities=13% Similarity=0.039 Sum_probs=188.3
Q ss_pred hhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHH
Q 018940 53 DIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVF 132 (348)
Q Consensus 53 ~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 132 (348)
|.++...+.|.+.+++.+.+++++++.|.+.||+.-.|-+...+ +...+..++-. . ..+... +..+
T Consensus 75 dl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~-~~w~~~~~~~~------~---~~s~~~----~ial 140 (495)
T KOG2533|consen 75 DLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG-ILWGLFGFLTA------A---VHSFPG----LIAL 140 (495)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH-HHHHHHHHHHH------H---HhhhHH----HHHH
Confidence 34667788999999999999999999999999998555433222 22211111111 0 112332 2333
Q ss_pred HHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHH
Q 018940 133 AAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFI 212 (348)
Q Consensus 133 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i 212 (348)
.++.|+..++..++..+.+..... ++||+...++.++..++|++.++.+...+...-+. ....||||.|++-+++
T Consensus 141 r~llGl~es~~wP~~~~~lg~wy~-~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~----~~~~gW~~~FiI~G~i 215 (495)
T KOG2533|consen 141 RFLLGLFESGGWPGVVAILGNWYG-KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS----GGLAGWRWLFIIEGVI 215 (495)
T ss_pred HHHHHHHhcccchHHHHHHHhhcC-hhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC----CCcCCceeehhHHHHH
Confidence 346788888888888888888774 68999999999999999999888776554432111 1357999999999999
Q ss_pred HHHHHHHHHhhcccccccc-----cc----------cC-----CchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHH
Q 018940 213 GCCFVGIFLSRTEEPRLKM-----GL----------RG-----NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAY 272 (348)
Q Consensus 213 ~~~~~ll~~~~~~e~~~~~-----~~----------~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 272 (348)
.++..++.++++|+.+.+. ++ ++ ++..+..+++.+++|..|...+++++.....++...|
T Consensus 216 ~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~ 295 (495)
T KOG2533|consen 216 TLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYW 295 (495)
T ss_pred HHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHH
Confidence 9999999999998754311 00 00 1123456788999999999999999999999999999
Q ss_pred HHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHh----hhhhhHHHHHHH-HHHHHHHHhHhhc
Q 018940 273 LAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWT----GQRLKAYYSAGG-VLWVFCGAGILIL 337 (348)
Q Consensus 273 ~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~----g~r~k~~~~~g~-~l~~v~~~~~~~~ 337 (348)
+|.|+.+..|.+..+...+.....++++++.++++++ ||. .+| ..+...+ +...++++.+...
T Consensus 296 lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~--~~~~~~~~~~~~~g~~~l~~~ 364 (495)
T KOG2533|consen 296 LPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARR--LLFIVFLCLYAIIGAISLLAA 364 (495)
T ss_pred HHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHH--HHHHHHHHHHHHHHHHHHHhh
Confidence 9999999777887766667677788999999999998 994 344 4444443 3455554444443
No 97
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.68 E-value=6.9e-14 Score=127.84 Aligned_cols=271 Identities=15% Similarity=0.099 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 41 ACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 41 ~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
..+.+.++..-+|.|+|.+.+|.+.++..++..+.+|+..+++.|+|..|.+ ..+.+..+++..+ = + ..
T Consensus 29 tsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l-~~~Llli~~G~~i-R----~-----~~ 97 (395)
T COG2807 29 TSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL-FLALLLIAAGILI-R----S-----LG 97 (395)
T ss_pred hhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH-HHHHHHHHHHHHH-H----h-----cc
Confidence 3445666666666799999999999999999999999999999999998875 4566666666532 1 1 01
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
+.... .....+.+.+.+..++-..+++-+-. ||+-+..++.+.....+|+.+++.+..|+... ..
T Consensus 98 ~~~~L----~~gt~l~G~gIav~nVLLPslIK~~F--pk~~~~mtglYs~sl~~~aaLaa~lavpla~~---------~~ 162 (395)
T COG2807 98 GLPLL----FLGTLLAGAGIAVINVLLPSLIKRDF--PKRVGLMTGLYSTSLGAGAALAAALAVPLAQH---------SG 162 (395)
T ss_pred cHHHH----HHHHHHHHhhHHHHHHhhhHHHHhhc--ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHh---------hc
Confidence 11111 11123556666666655555665543 34557788899888889999988888787642 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc
Q 018940 201 QYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIND 280 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~ 280 (348)
+||......+.++++..++.+.-. .|.+.+ +.+.+ ..+..+++|||.-|.+.+..-+.+..+|....|+|.++.|+
T Consensus 163 gW~~aL~~WAl~allAl~~WlPq~--~r~~~~-~~~~~-~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~ 238 (395)
T COG2807 163 GWRGALGFWALLALLALLIWLPQA--LREQAA-SIATK-LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR 238 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhc--cccccc-ccccc-cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 799988877777776655443321 121111 11111 11224578999989998888888899999999999999986
Q ss_pred ccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhccCCcee
Q 018940 281 LRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSA 343 (348)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~~~~~~ 343 (348)
|+++.+.+....+..+..+..+++.|++ +|..++ |.......+.+.+|.+.+.+.|.+.+.
T Consensus 239 -G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~-r~~~~~~~~~~l~G~~G~~~~P~~~~~ 300 (395)
T COG2807 239 -GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ-RPLVVLALLLMLVGLVGLLLAPGQLPI 300 (395)
T ss_pred -CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 9999888877777888999999999997 765544 366777778888888888888776553
No 98
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.67 E-value=2.7e-14 Score=133.29 Aligned_cols=276 Identities=12% Similarity=0.058 Sum_probs=188.5
Q ss_pred HhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccC-----CchHHHHHHHHHHHHHHHHHhcCc--CCCcccC-cccch
Q 018940 52 TDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFG-----HFKIWHGAGSVLVAVSFSSVFGGC--MPCRILS-TSTLK 123 (348)
Q Consensus 52 ~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~G-----rrr~~i~~~~~~~~i~~~~l~~~~--~~~~~~~-~~~~~ 123 (348)
.|+++++...|.+.+...+..- ..|.+|+.||+.+ ||.||++.|....+.+....-... +.....+ ..+.+
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 3558999999988887777655 6999999999988 999999999888777653221000 1100000 01111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHH
Q 018940 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYR 203 (348)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 203 (348)
.....-.+...++|+|.+...+++.++..|.++ ||+|.++.++.+....+|.++++.+.+.++.-+ +...-.
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~-e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~-------s~~rL~ 158 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLALLADLAP-EERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF-------SPERLI 158 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCC-HhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc-------CHHHHH
Confidence 111112222247888899999999999999984 789999999999998888888777766655322 122222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccc----cccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Q 018940 204 WIAYSSIFIGCCFVGIFLSRTEEPRLKM----GLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIN 279 (348)
Q Consensus 204 ~~~~i~~~i~~~~~ll~~~~~~e~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~ 279 (348)
..+...+++.++..++.... .|++.++ +++++.+.++.+++..++|+.++.....++...++..-...+=.|--+
T Consensus 159 ~v~~~~a~i~~~l~~ia~wg-~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~ 237 (403)
T PF03209_consen 159 QVIQGVALIALLLNLIALWG-QEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGE 237 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhH
Confidence 23333444444444444433 4543322 223455677888888899998888777777778888888888889999
Q ss_pred cccccchhhhHHhHHHHHHHHHHHHHHHHH--HHhhhhhhHHHHHHHHHHHHHHHhHhhccC
Q 018940 280 DLRMGQSAKALVPAIIYICSFIVSILLQEM--AWTGQRLKAYYSAGGVLWVFCGAGILILPM 339 (348)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l--~r~g~r~k~~~~~g~~l~~v~~~~~~~~~~ 339 (348)
..|++..+..-+......+.++|-.+.+++ +|.+++ +.-.+|+.+.+++.....+..+
T Consensus 238 Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~--~~a~~G~~~~~~~f~lii~a~~ 297 (403)
T PF03209_consen 238 VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK--RTAALGCLLGALAFALIILAGP 297 (403)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch--HHHHHHHHHHHHHHHHHHHHHh
Confidence 999998776656666677788888888875 567777 7888888888888877666533
No 99
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.65 E-value=8.6e-16 Score=141.40 Aligned_cols=250 Identities=11% Similarity=-0.005 Sum_probs=179.6
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHH
Q 018940 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAA 134 (348)
Q Consensus 55 g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 134 (348)
+-+++++|++.+...+.+.+.+|++|.+.||.|+|-|+ +.|...+..+.++ |. . ..++...+..+ .
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm-~~Gl~vmf~sTil-Fa--f------g~sy~~l~vAR----~ 167 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPM-VAGLFVMFLSTIL-FA--F------GNSYPMLFVAR----S 167 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHH-HHHHHHHHHHHHH-HH--H------cchhHHHHHHH----H
Confidence 66789999999999999999999999999999999986 4687777777754 32 1 13455454444 3
Q ss_pred HHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHH
Q 018940 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (348)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~ 214 (348)
+-++|.++..++..+++++..++++||+++.+..-.+..+|.++++.+++.+-. -.|++.+|++++++.+
T Consensus 168 LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe----------~~Gk~aPFlVL~~v~L 237 (464)
T KOG3764|consen 168 LQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE----------FAGKSAPFLVLAIVLL 237 (464)
T ss_pred HhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh----------hcCCcCcHHHHHHHHH
Confidence 677999999999999999999888899999999888888888887666554443 3467788999998888
Q ss_pred HHHHHHHhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHH
Q 018940 215 CFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAI 294 (348)
Q Consensus 215 ~~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 294 (348)
+-..+.++.++.. +.+++++++ ..++++++++|+.+...+....++........-++.+..|+...+..+.++..+-
T Consensus 238 ld~~L~l~vi~p~-~~~~~~~~~--~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp 314 (464)
T KOG3764|consen 238 LDGALQLLVIEPT-EMDPDSTEQ--GTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLP 314 (464)
T ss_pred HHHHHHHheeCcc-ccCcccccc--CccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecc
Confidence 8877776655432 222211111 2346789999997766665555667777888888999888888555455544333
Q ss_pred HHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 295 IYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 295 ~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
..+..+++..+.+.+ ||+++..-.....|++...+.+
T Consensus 315 ~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~ 352 (464)
T KOG3764|consen 315 ASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSS 352 (464)
T ss_pred cccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHh
Confidence 456778888888887 9999661123334444444433
No 100
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.65 E-value=6.6e-14 Score=135.04 Aligned_cols=256 Identities=11% Similarity=0.028 Sum_probs=169.1
Q ss_pred CChhHH----HHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHH-hcCcCCCcccCcccchhHHHHHH
Q 018940 56 LSPRGA----AAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV-FGGCMPCRILSTSTLKVETISYC 130 (348)
Q Consensus 56 ~s~~~~----g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~ 130 (348)
+|..+. +.+.++..+..++++.+.|.++||+|||..+.+ ..+...++..+. +. .. ....... +
T Consensus 53 ~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~-~~~l~~~~~~~~~~s--~~-----~~~~e~l----i 120 (485)
T KOG0569|consen 53 LSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLL-SNLLAVLAALLMGLS--KS-----APSFEML----I 120 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHHHHHHH--HH-----hhhHHHH----H
Confidence 555443 557888899999999999999999999977654 444433333222 21 00 1122222 3
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHH
Q 018940 131 VFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSI 210 (348)
Q Consensus 131 l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 210 (348)
+...+.|+..+.......-++.|.+| .+-||..+.....+..+|..++..++.|-+ +| .+..|++.+....
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP-~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i--lG------t~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISP-KNLRGALGTLLQIGVVIGILLGQVLGLPSL--LG------TEDLWPYLLAFPL 191 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcCh-hhhccHHHHHHHHHHHHHHHHHHHHccHHh--cC------CCcchHHHHHHHH
Confidence 23345666555555555567889986 578999999999998888888766654433 33 3567998887776
Q ss_pred HHHHHHHHHHHhhccccccc----cc--cc--------------C---------------CchhHHHHHHHHHhHHHHHH
Q 018940 211 FIGCCFVGIFLSRTEEPRLK----MG--LR--------------G---------------NSHARISWAYWFKKILYYQV 255 (348)
Q Consensus 211 ~i~~~~~ll~~~~~~e~~~~----~~--~~--------------~---------------~~~~~~~~~~~~~~~~~~~~ 255 (348)
+++++. ++...+.||+++. +. ++ + +++.+.+++++++||.+++-
T Consensus 192 i~~~~~-l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~ 270 (485)
T KOG0569|consen 192 IPALLQ-LALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRP 270 (485)
T ss_pred HHHHHH-HHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHH
Confidence 655544 4455678886431 10 00 0 00012247789999877653
Q ss_pred ----HHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHH
Q 018940 256 ----ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFC 330 (348)
Q Consensus 256 ----~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~ 330 (348)
....+..++.......+|.+.+.++.|++..+........++.+++.+++++++ ||.||| +.+..++.+..+.
T Consensus 271 ~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR--pLll~~~~~~~~~ 348 (485)
T KOG0569|consen 271 LLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR--PLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--HHHHHHHHHHHHH
Confidence 223444445444556688888888889988777777777788889999999997 999999 8888888777776
Q ss_pred HHhHh
Q 018940 331 GAGIL 335 (348)
Q Consensus 331 ~~~~~ 335 (348)
.+.+.
T Consensus 349 ~~~~~ 353 (485)
T KOG0569|consen 349 LLLMS 353 (485)
T ss_pred HHHHH
Confidence 65554
No 101
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.63 E-value=9.3e-13 Score=130.03 Aligned_cols=159 Identities=11% Similarity=-0.004 Sum_probs=107.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc-cCCchHHHHHHHHHHHHHHHHHh
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSSVF 108 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr-~Grrr~~i~~~~~~~~i~~~~l~ 108 (348)
+..+......+.+..+++.|+++. |+|..+.+.+.+..........++.|+++|| +||||.++ .+....+++...+.
T Consensus 28 ~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~-~g~~~~~ig~~l~~ 106 (500)
T PRK09584 28 SIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM-LGAIVLAIGYALVA 106 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH-HHHHHHHHHHHHHH
Confidence 445566677777788999999775 9999999998888777777777899999999 59998754 56666666654332
Q ss_pred cCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc-cchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 109 GGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST-SRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
. .+ .......+. ..+.+++.+....+..+++++..++++ +|++..++.+.+.++|..+++.+.+.+.
T Consensus 107 ~--~~------~~~~~l~~~----~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 107 W--SG------HDAGIVYMG----MATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred H--hc------ccHHHHHHH----HHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 111111111 124556666666666778888875433 3445677777888888887766654443
Q ss_pred HhccCCcccchhhHHHHHHHHHHHH
Q 018940 188 SVSTAKTHADLENQYRWIAYSSIFI 212 (348)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~~~i~~~i 212 (348)
+..|||+.|.+.++.
T Consensus 175 ----------~~~g~~~~F~i~~i~ 189 (500)
T PRK09584 175 ----------AKYGWSVAFALSVVG 189 (500)
T ss_pred ----------HhhCHHHHHHHHHHH
Confidence 245899999887643
No 102
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.63 E-value=1e-13 Score=136.12 Aligned_cols=279 Identities=15% Similarity=0.068 Sum_probs=194.6
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~ 106 (348)
++..+.++..+.....+..+...+.++++.+..+++++.++..-+..+..|+.+.++||+|.|+.. +.|.++.++++.+
T Consensus 49 ~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~-i~G~~v~~~g~~l 127 (509)
T KOG2504|consen 49 FASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM-IAGGLVAALGLLL 127 (509)
T ss_pred HhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH-HHHHHHHHHHHHH
Confidence 344444444444444444445555555699999999999999999999999999999999998774 5788888888764
Q ss_pred HhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (348)
Q Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~ 186 (348)
..+ ..+.+..++.+. ++.|+|.+....|...++.... +++|+.+.++...+..+|..+.+ ++
T Consensus 128 ssF---------~~~i~~l~lt~g---vi~G~G~~~~~~paiviv~~YF--~kkR~lA~Gia~~GsG~G~~~~~----~l 189 (509)
T KOG2504|consen 128 SSF---------ATSLWQLYLTFG---VIGGLGLGLIYLPAVVILGTYF--EKKRALATGIAVSGTGVGTVVFP----PL 189 (509)
T ss_pred HHH---------HhhHHHHHHHHH---HHhhccchhhhcchhhhhhhHh--HHHHHHHHhhhhccCCcceeeHH----HH
Confidence 432 124444555554 3788889988888888887665 56899999998888888877644 33
Q ss_pred HHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--------------------cc-------cc-cc--ccc--
Q 018940 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTE--------------------EP-------RL-KM--GLR-- 234 (348)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~--------------------e~-------~~-~~--~~~-- 234 (348)
...+. +..|||+..++.+.+.+-..+......| |. +. .+ +..
T Consensus 190 ~~~l~------~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (509)
T KOG2504|consen 190 LKYLL------SKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKL 263 (509)
T ss_pred HHHHH------HHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcc
Confidence 33332 3679999998887777665555555444 00 00 00 000
Q ss_pred -------------CCc--hhHHHH----HHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHH
Q 018940 235 -------------GNS--HARISW----AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAII 295 (348)
Q Consensus 235 -------------~~~--~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 295 (348)
+.. ..+... .+++|||.++.+.+...+...++.....++|.|.. ..+.+..+.+....+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Sii 342 (509)
T KOG2504|consen 264 SLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSII 342 (509)
T ss_pred cccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHH
Confidence 000 111112 47889999888888888888899999999999998 6688887777777888
Q ss_pred HHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 296 YICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 296 ~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
.+..+++-++.|++ ||...+.+..+.++++..+++.
T Consensus 343 gi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 343 GVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHH
Confidence 88999999999998 8888552345666666555555
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.60 E-value=2.9e-13 Score=132.52 Aligned_cols=272 Identities=12% Similarity=0.020 Sum_probs=168.2
Q ss_pred hHHHHHHHHHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccC----CchHHHHHHHHHHH-HHHHHH
Q 018940 34 MLNDITAACWFTYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFG----HFKIWHGAGSVLVA-VSFSSV 107 (348)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~G----rrr~~i~~~~~~~~-i~~~~l 107 (348)
+...+. .+....+++++++ .|+|+++++...+...+...+ .|++|.++||++ |||++++.+.++.. +... .
T Consensus 36 ~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~-~ 112 (468)
T TIGR00788 36 FVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYG-L 112 (468)
T ss_pred HHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHH-h
Confidence 344444 4555666777776 499999999999999999887 788999999974 46777777765552 2221 1
Q ss_pred hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchh---HHHHHHHHHHHHHHHHHHHHH
Q 018940 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVV---LTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~---~~~~~~~~~~ig~~~~~~~~~ 184 (348)
. +. ..+.... ..+...+.+++.+..+++..++..|..+ |++.. ..++.+....+|..+++.+++
T Consensus 113 l----~~----~~~~~~~---~~~~~~l~~~~~a~~dv~~da~~~e~~~--~~~~~~~~~~s~~~~~~~~G~~vg~~l~G 179 (468)
T TIGR00788 113 L----PG----KVSSAKV---AAAFIFLAALAKALYDVLVDSLYSERIR--ESPSAGPSLVSWMWGASATGGLISSLLGG 179 (468)
T ss_pred c----cc----ccchHHH---HHHHHHHHHHHHHHHHHhHHHHHhhhhh--cCCCcCCCeeeHHHHHHHHHHHHHHHHHH
Confidence 1 10 1111111 1112235677788888899999999886 23322 333444444567777666665
Q ss_pred HHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccc-cccc-cCC---------c----hhHH---HHHHH
Q 018940 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL-KMGL-RGN---------S----HARI---SWAYW 246 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~-~~~~-~~~---------~----~~~~---~~~~~ 246 (348)
++.. ..+|+..+++.+++.++. .+...+.+|++. ..++ +++ . ..++ ..++.
T Consensus 180 ~l~~----------~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 248 (468)
T TIGR00788 180 PLLD----------KTLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGA 248 (468)
T ss_pred HHHH----------hcCcchHHHHHHHHHHHH-HHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 5542 347888888887777666 444567788541 1111 010 0 1111 23455
Q ss_pred HHhHHHHHHHHHHHH-HHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHH
Q 018940 247 FKKILYYQVALVYML-TRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGG 324 (348)
Q Consensus 247 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~ 324 (348)
+++|..+...+..++ .......... ...+.++..|.++.+.++......++.+++..+.++. +|++.| +++.++.
T Consensus 249 l~~~~i~~~l~fifl~~~~~~~~~~~-~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r--~~l~~~~ 325 (468)
T TIGR00788 249 IQLLEIAKPLIFIFLSYANLPGASGS-VFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR--LLFGVTT 325 (468)
T ss_pred HhcHHHHHHHHHHHHHHhhcCCCCce-eEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH--HHHHHHH
Confidence 777877665444444 2222222111 1113445688888888777666778888888888876 888888 9999999
Q ss_pred HHHHHHHHhHh
Q 018940 325 VLWVFCGAGIL 335 (348)
Q Consensus 325 ~l~~v~~~~~~ 335 (348)
++.+++.+...
T Consensus 326 ~l~~~~~~~~~ 336 (468)
T TIGR00788 326 LLYTLSSLFDL 336 (468)
T ss_pred HHHHHHHhCce
Confidence 98888775543
No 104
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.60 E-value=3.1e-12 Score=124.97 Aligned_cols=165 Identities=13% Similarity=0.007 Sum_probs=112.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhccc-CCchHHHHHHHHHHHHHHHHHhcC
Q 018940 33 HMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRF-GHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~-Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
.+......+.+..+++.|+++. |+|+.+.+.+...+.....+..++.|+++||+ ||||.+ ..+.+..+++...+..
T Consensus 18 ~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i-liG~il~~lg~lll~~- 95 (493)
T PRK15462 18 QIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV-MLGALLMAIGHVVLGA- 95 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH-HHHHHHHHHHHHHHHH-
Confidence 4445666667778999999875 99999999999999999999999999999999 999885 4677777766543321
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNS-TSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~ 189 (348)
+ ..+...... .+ .+..++.+....+..++++|..+++ ++|.+..++.+.+.++|+.+++.+.+.+.
T Consensus 96 --~-----~~~~~~~~l--~l--~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~-- 162 (493)
T PRK15462 96 --S-----EIHPSFLYL--SL--AIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ-- 162 (493)
T ss_pred --h-----hcchhHHHH--HH--HHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH--
Confidence 1 011111111 11 1233445555555667888988643 35788888888888888887766654443
Q ss_pred ccCCcccchhhHHHHHHHHHHHHHHHHHHHHH
Q 018940 190 STAKTHADLENQYRWIAYSSIFIGCCFVGIFL 221 (348)
Q Consensus 190 ~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~ 221 (348)
+..||++.|.+.++ +.+..++.+
T Consensus 163 --------~~~Gw~~~F~iaai-gm~l~li~~ 185 (493)
T PRK15462 163 --------EEYSWAMGFGLAAV-GMIAGLVIF 185 (493)
T ss_pred --------hhhChHHHHHHHHH-HHHHHHHHH
Confidence 24589999887655 334344333
No 105
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.60 E-value=2e-12 Score=127.90 Aligned_cols=268 Identities=15% Similarity=0.113 Sum_probs=155.8
Q ss_pred HHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchh
Q 018940 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (348)
Q Consensus 45 ~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 124 (348)
.-++...+|+|-+ ....|+.....+..++..|+.|+++|.||||..+ +.+.++..++.+...+ ..+..
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~-i~g~~l~vvG~Iv~at---------A~~~~- 132 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF-IIGSLLGVVGSIVCAT---------AQNMN- 132 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH-HHHHHHHHhHHHHhhc---------CCcHH-
Confidence 3345555667554 3566778888899999999999999999998765 5688888888765432 11222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCcccchhhHHH
Q 018940 125 ETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS-VSTAKTHADLENQYR 203 (348)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 203 (348)
. ++....+.|+|.+..... ...++|+.++ |.|.....+.. ...+..... ++.++ .+. ...+||
T Consensus 133 ~---~iag~~l~GvgaG~~~~~-~~~isEl~p~-k~R~~~~~~~~----~~~i~~~~~-~~~ia~~~~------~~~~WR 196 (599)
T PF06609_consen 133 T---FIAGMVLYGVGAGVQELA-ALAISELVPN-KWRGLGLAIAS----IPFIITTWI-SPLIAQLFA------AHSGWR 196 (599)
T ss_pred H---HHHHHHHHHHhhHHHHHH-HHHHHHhccc-chhhhHhHHHH----HHHHhhhcc-cHHHHHHhc------cCCCcc
Confidence 1 222223566776655443 4457888854 56654333222 222222222 23332 222 245899
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccc-cc-ccc-----c--------------------------------CCc-------
Q 018940 204 WIAYSSIFIGCCFVGIFLSRTEEPR-LK-MGL-----R--------------------------------GNS------- 237 (348)
Q Consensus 204 ~~~~i~~~i~~~~~ll~~~~~~e~~-~~-~~~-----~--------------------------------~~~------- 237 (348)
|.+++++++..+..++.+++.+.++ .+ .++ + +.+
T Consensus 197 w~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~ 276 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAP 276 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhh
Confidence 9999988876666655544443221 11 000 0 000
Q ss_pred ------------------hhHHHH--HHHHHhH-HHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccch---hhhHHhH
Q 018940 238 ------------------HARISW--AYWFKKI-LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS---AKALVPA 293 (348)
Q Consensus 238 ------------------~~~~~~--~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~---~~~~~~~ 293 (348)
..|+++ .++|||+ .+....+..++....++....++|+......+-+.. ..+....
T Consensus 277 lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~ 356 (599)
T PF06609_consen 277 LVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISS 356 (599)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhh
Confidence 001111 3577774 444444555555566677778899887766555432 2334444
Q ss_pred HHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhccCCc
Q 018940 294 IIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILPMNM 341 (348)
Q Consensus 294 ~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~~~~ 341 (348)
....+..+|+++.+.+ +|+++- |..+.++.+++++++-++....++.
T Consensus 357 ~~~fg~~~g~~i~g~l~~~ir~~-Kw~li~~~~~~ta~~Gama~~~~~n 404 (599)
T PF06609_consen 357 PVGFGSCAGAVILGLLFSKIRHI-KWQLIFGSVLMTAFCGAMAAVRPDN 404 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHccch-hHHHHHHHHHHHHHHHHHHHccCCC
Confidence 4556677788778876 777644 6677788888887776666664444
No 106
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.57 E-value=4.9e-12 Score=121.08 Aligned_cols=148 Identities=8% Similarity=-0.007 Sum_probs=106.3
Q ss_pred CchHhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhH-HHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHH
Q 018940 22 GRWSVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRG-AAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVL 99 (348)
Q Consensus 22 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~-~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~ 99 (348)
+.|.+...-+..++...-.=.-.++..+++.+. |+++.+ .|.+.++....+++.+.+.|+++||+|.||.+ ..+.+.
T Consensus 23 ~~W~~~~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL-~l~~l~ 101 (511)
T TIGR00806 23 KSWRVLVLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL-VLQALS 101 (511)
T ss_pred cchhHHHHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH-HHHHHH
Confidence 556666554444433222222247777777765 999999 99999999999999999999999999998775 455555
Q ss_pred HHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHH
Q 018940 100 VAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (348)
Q Consensus 100 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~ 179 (348)
..+...++.+ ..+.... .+..+++|++.+... ++..++....| ++||+++.++.+.+..+|.+++
T Consensus 102 Wsl~t~L~~f---------a~Sl~~L----~i~R~llGvaEA~~~-A~~syI~~WfP-~kER~ratsi~~sg~~vG~~Ia 166 (511)
T TIGR00806 102 FVCVWLLLLL---------GTSVWHM----QLMEVFYSVTMAARI-AYSSYIFSLVP-PSRYQRAAAYSRAAVLLGVFLS 166 (511)
T ss_pred HHHHHHHHHH---------HHHHHHH----HHHHHHHHHHHHHHH-HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 5555443221 1122222 333347888888777 88888888885 7899999999999999999988
Q ss_pred HHHHHH
Q 018940 180 YAIAFI 185 (348)
Q Consensus 180 ~~~~~~ 185 (348)
+.+++.
T Consensus 167 ~~L~ql 172 (511)
T TIGR00806 167 SVLGQL 172 (511)
T ss_pred HHHHHH
Confidence 777655
No 107
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.51 E-value=6.4e-12 Score=124.54 Aligned_cols=250 Identities=14% Similarity=0.107 Sum_probs=155.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHH
Q 018940 59 RGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNV 138 (348)
Q Consensus 59 ~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 138 (348)
.+.+++.+...+..++++++.|+++|++|||+.++ .+.++..++..+... . .+.......+ .+.|+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~-~~~~~~~iG~ii~~~--a-------~~~~~l~~GR----~l~G~ 154 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL-LAVVLFLIGAIIIAL--A-------PSWYQLIVGR----ILTGL 154 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHHHHHHHHHHHHHH--h-------hhHHHHHHHH----HHhcc
Confidence 45699999999999999999999999999998864 577777777654432 1 1334343333 46778
Q ss_pred HHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHH
Q 018940 139 GWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVG 218 (348)
Q Consensus 139 ~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~l 218 (348)
|.+........+++|+++ ++.|+...+..+....+|..++..+ +.... +...+||..+.+..+.+++..+
T Consensus 155 g~G~~~~~~piy~sEiap-~~~RG~l~~~~~l~~~~Gi~~~~~~-----~~~~~----~~~~~Wr~~~~~~~i~~~~~~~ 224 (513)
T KOG0254|consen 155 GVGGASVLAPVYISEIAP-AHIRGTLVSLYQLFITIGILLGYCI-----NYGTS----KVYAGWRIPLGLALIPAVILAL 224 (513)
T ss_pred chhhhhhcchhhHhhcCC-hhhhHHHHHHHHHHHHHHHHHHHHH-----hhhhc----cCCccHHHHHHHHHHHHHHHHH
Confidence 888777777788999885 5789999998888877776665322 22211 0114899888888777777666
Q ss_pred HHHhhccccccc---ccc------------c--CCch--hHH-----------------HHHHHHH--hHH-HHHHHHHH
Q 018940 219 IFLSRTEEPRLK---MGL------------R--GNSH--ARI-----------------SWAYWFK--KIL-YYQVALVY 259 (348)
Q Consensus 219 l~~~~~~e~~~~---~~~------------~--~~~~--~~~-----------------~~~~~~~--~~~-~~~~~l~~ 259 (348)
. .++.||++.. +.+ . +++. +.+ .++++++ +++ ........
T Consensus 225 ~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~ 303 (513)
T KOG0254|consen 225 G-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQ 303 (513)
T ss_pred H-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHH
Confidence 6 7788885421 100 0 0000 000 0122222 111 11122334
Q ss_pred HHHHH-HHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 260 MLTRL-VVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 260 ~~~~~-~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
.+.+. +.+....|.+.. .+..|.+... .....+..+..+++.+++..+ ||+||| +.+..|...++++..++...
T Consensus 304 ~fqq~tG~~~~~~Y~~~i-f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr--~lll~s~~~m~~~~~~~~~~ 379 (513)
T KOG0254|consen 304 LFQQLTGINYVFYYSTTI-FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR--KLLLFGAAGMSICLVILAVV 379 (513)
T ss_pred HHHHHhCCceEEeehHHH-HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHhHHHHHHHHHHHHHH
Confidence 44444 334444455544 4444555321 223334455667777777666 999999 99999999888888766644
No 108
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.43 E-value=5.2e-11 Score=110.45 Aligned_cols=202 Identities=12% Similarity=0.005 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc----cc--chhhHHHHHH
Q 018940 133 AAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT----HA--DLENQYRWIA 206 (348)
Q Consensus 133 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~----~~--~~~~g~~~~~ 206 (348)
.++.+.|.+..++..+++++++.+ +|++++..++.+....+|..+++.+...++..-.... .+ .....|++++
T Consensus 17 ~f~~g~G~~~lq~~~n~~v~~~~~-~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y 95 (310)
T TIGR01272 17 LFVLASGLTILQVAANPYVSILGP-IETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPY 95 (310)
T ss_pred HHHHHhhHHHHHhhHHHHHHHHCC-cchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHH
Confidence 347888999999999999999874 5678888899999999999988777665553211000 00 0124688888
Q ss_pred HHHHHHHHHHHHHH-HhhcccccccccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc--ccc
Q 018940 207 YSSIFIGCCFVGIF-LSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIND--LRM 283 (348)
Q Consensus 207 ~i~~~i~~~~~ll~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~--~~~ 283 (348)
++.+.+..+..++. +...||.+.+++++..++.....+..+|+|+++...+..++....-.+...|.+.|+.|. .|+
T Consensus 96 l~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~ 175 (310)
T TIGR01272 96 LLLAGALAVLAIIFAFLPLPELQEADVARVSSGDTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGL 175 (310)
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcccccccccccccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 86655544444332 222344222111111001111123567888877766667776667778899999999864 588
Q ss_pred cchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 284 GQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 284 ~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
+.++.+........+..+|.++.+++ ||+|+| |.+.++..+.+++.++....
T Consensus 176 s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~--~~l~~~~~l~~~~~~l~~~~ 228 (310)
T TIGR01272 176 PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG--RYLAFNAFLAVLLSIGAALT 228 (310)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHc
Confidence 87777776666777888999999997 999988 77888877777766544443
No 109
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.43 E-value=2.4e-11 Score=117.69 Aligned_cols=267 Identities=18% Similarity=0.126 Sum_probs=158.2
Q ss_pred HHHHHHHHh-hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcc---cC-CchHHHHHHHHHHHHHHHHHhcCcCCCcccCc
Q 018940 45 TYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELIDR---FG-HFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (348)
Q Consensus 45 ~~l~~~~~~-~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr---~G-rrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~ 119 (348)
.-..+|++| +|+++++......+..+...+ .|+.|.++|- +| |||++++.+.++.+++...+.. .|.. .
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~--~~~~---~ 83 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL--LPAS---E 83 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh--cccc---c
Confidence 334456666 499999999998888887775 9999999995 46 8899999888877665543332 3411 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccch
Q 018940 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLN-STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADL 198 (348)
Q Consensus 120 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~ 198 (348)
.+.... .+...+..+|+...++...++..|..+. +++|+...++.+....+|++++..+.+++...
T Consensus 84 ~s~~~~----~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~--------- 150 (433)
T PF03092_consen 84 SSAAIA----VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS--------- 150 (433)
T ss_pred chhhhH----HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc---------
Confidence 122211 1122356788889999999999998853 34477888888888888888888777776542
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc------cC-Cc----hhHH---HHHHHHHhHHHHHHHH-HHHHHH
Q 018940 199 ENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL------RG-NS----HARI---SWAYWFKKILYYQVAL-VYMLTR 263 (348)
Q Consensus 199 ~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~------~~-~~----~~~~---~~~~~~~~~~~~~~~l-~~~~~~ 263 (348)
.+.++.+.+.+++..+..+...+..+|+++.++. ++ .+ ..++ .+++.++.|..+...+ ..++.+
T Consensus 151 -~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~ 229 (433)
T PF03092_consen 151 -FGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFN 229 (433)
T ss_pred -CCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 2344555566666666655666666662221110 01 00 0122 2345666666665444 333332
Q ss_pred HHHHhh---hHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHh
Q 018940 264 LVVNVS---QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAG 333 (348)
Q Consensus 264 ~~~~~~---~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~ 333 (348)
...... ..|+.++..+-.|++....+....+..+++++|..+.... .+...| +++.+..++.++..+.
T Consensus 230 ~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R--~~~~~t~~~~~~~~l~ 301 (433)
T PF03092_consen 230 LPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWR--RIFVVTTLVSVLASLF 301 (433)
T ss_pred hccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH--HHHHHHHHHHHHHhcc
Confidence 222211 1122222121223666655555555556666666655543 555555 7777777766665543
No 110
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.40 E-value=4.1e-10 Score=103.87 Aligned_cols=251 Identities=14% Similarity=0.043 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcc
Q 018940 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~ 116 (348)
..++-+..+|+=..|++.|.++.|++.+...+....++..++.|.++||+||||. .+.-+++..+++..--
T Consensus 47 ~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~-cl~~cily~~scl~k~-------- 117 (354)
T PF05631_consen 47 MAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA-CLLFCILYSLSCLTKH-------- 117 (354)
T ss_pred HHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH-HHHHHHHHHHHHHHHh--------
Confidence 3344466677655555669999999999999999999999999999999999987 4556777777764321
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhh-hcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVN-CITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 117 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~-~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
..+...+.+.++ +.|++.+....++-++.. |..+..-++..+..........++.+..+..+.+.+.+..
T Consensus 118 --~~~~~~L~~GRv----lgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~--- 188 (354)
T PF05631_consen 118 --SSNYPVLLLGRV----LGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLAD--- 188 (354)
T ss_pred --ccccHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHH---
Confidence 123333434443 566776766666666653 2211100112222221111112222222222232222110
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccc--cCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHH-hhhHH
Q 018940 196 ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL--RGNSHARISWAYWFKKILYYQVALVYMLTRLVVN-VSQAY 272 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 272 (348)
....|-..+|....++..+..++....=+|...+..+ +..++.++.++.+.+||+.+.+.+...+.....+ ....|
T Consensus 189 -~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflW 267 (354)
T PF05631_consen 189 -WFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLW 267 (354)
T ss_pred -HhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeee
Confidence 0011224455544444444443333333443221111 1123445567778888998888777776655444 45556
Q ss_pred HHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH
Q 018940 273 LAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM 309 (348)
Q Consensus 273 ~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l 309 (348)
-|..-.++.+.+ .+++....+++..+|+.+.+++
T Consensus 268 tPaL~~~~~~~P---~GlIFssFM~a~MlGS~lf~~l 301 (354)
T PF05631_consen 268 TPALDPDDEELP---LGLIFSSFMVAMMLGSSLFSRL 301 (354)
T ss_pred eceecCCCCCCC---chHHHHHHHHHHHHHHHHHHHH
Confidence 776443222332 3455566678889999888764
No 111
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.39 E-value=7.3e-12 Score=117.65 Aligned_cols=157 Identities=17% Similarity=0.177 Sum_probs=118.8
Q ss_pred hHhhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhc----ccCCchHHHHHHHHH
Q 018940 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELID----RFGHFKIWHGAGSVL 99 (348)
Q Consensus 24 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~D----r~Grrr~~i~~~~~~ 99 (348)
+..+.-+...++..+.+.+...|+++|++.+|++....+.+...+++...+.||+.|..+| |||||||++..+.+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 5567777888889999999999999999999999999999999999999999999999999 599999999998888
Q ss_pred HHHHHHHHhcCcCCC---cccCccc---chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHH
Q 018940 100 VAVSFSSVFGGCMPC---RILSTST---LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173 (348)
Q Consensus 100 ~~i~~~~l~~~~~~~---~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ 173 (348)
.+++.+++-. .+. .+..... .......+++-.-+..+.....+.|.-++..|+..+++++.+++++...+..
T Consensus 112 i~~~l~Lig~--aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 112 IAVSLFLIGY--AADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHhhhhh--HhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHH
Confidence 8888764321 111 0001111 1123333333334677777788899999999998765444448888888888
Q ss_pred HHHHHHHHH
Q 018940 174 VANLSLYAI 182 (348)
Q Consensus 174 ig~~~~~~~ 182 (348)
+|+.++...
T Consensus 190 vGnvLGY~~ 198 (498)
T KOG0637|consen 190 VGNVLGYAL 198 (498)
T ss_pred hcceeeeec
Confidence 888776544
No 112
>PTZ00207 hypothetical protein; Provisional
Probab=99.34 E-value=1.8e-09 Score=107.50 Aligned_cols=166 Identities=10% Similarity=0.061 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
.++.+.+...++.|+|..+++++.+++. ...+.+++.|+++||+|||+.+ ..+.+..+++...... +..... ..+
T Consensus 45 ~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vl-lig~ll~~iG~ll~al-a~~~~i--~~s 119 (591)
T PTZ00207 45 AFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIF-VLSMTVFCLGTLLFAL-TFQEVI--EGS 119 (591)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHHHHHHH-Hhcccc--cCc
Confidence 3344455544456999999999988754 4456788899999999999875 4677777777654432 011000 012
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (348)
.+...+.+ .+.+.+.+....+....+.+.. |++|+++.++...+..+|+.+.+.+...+ + ..+
T Consensus 120 ~~~l~l~r----~l~G~G~~~~~~~~~~~i~~~F--p~~RG~a~Gi~~~~~gLGsaI~~~l~~~l---~--------~~~ 182 (591)
T PTZ00207 120 VVRLSVYN----GLMTLGCMLFDLGAVVTVLSVF--PSNRGAVVAIMKTFTGLGSAILGSIQLAF---F--------SDN 182 (591)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHHHhC--hhhhHHHHHHHHHHHHHHHHHHHHHHHHH---H--------HHh
Confidence 33222222 3566666666666666667766 46899999999988888876543322111 1 235
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccc
Q 018940 202 YRWIAYSSIFIGCCFVGIFLSRTEEPRL 229 (348)
Q Consensus 202 ~~~~~~i~~~i~~~~~ll~~~~~~e~~~ 229 (348)
|++.+++.++++++..++....+++++.
T Consensus 183 ~~~~fl~l~vl~~vv~ll~~~~vr~p~~ 210 (591)
T PTZ00207 183 TSAYFFFLMSFALVVGILAIVFMRLPPF 210 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeCCcc
Confidence 7777888888888888888888877643
No 113
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.28 E-value=5e-10 Score=108.21 Aligned_cols=181 Identities=13% Similarity=0.009 Sum_probs=121.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhCCC--------hhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 33 HMLNDITAACWFTYLLLFLTDIGLS--------PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~~g~s--------~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
.+...........+++.|.++.|.+ ..+.|.+.++..+...++.++.|+++||+||||.+ ..+.+...+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l-~~~~~~~~v~~ 295 (418)
T TIGR00889 217 SMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVM-LLSLVAWALRF 295 (418)
T ss_pred HHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-HHHHHHHHHHH
Confidence 3333333334457778888776544 36779999999999999999999999999998875 45666655554
Q ss_pred HHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHH-HHHHHHHHHHHHHH
Q 018940 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRN-AFTMVANLSLYAIA 183 (348)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~-~~~~ig~~~~~~~~ 183 (348)
..... . ..+.. ......+...+.+++++........++.+..+ +++|++..++.+ ....+|..+++.+.
T Consensus 296 ~l~~~---~-----~~~~~-~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p-~~~~g~~~g~~~~~~~~lg~~iGp~l~ 365 (418)
T TIGR00889 296 GFFAY---G-----DPEYF-GYALLFLSMIVYGCAFDFFNISGSVFVEKEVP-VHIRASAQGLFTLMCNGFGSLLGYILS 365 (418)
T ss_pred HHHHH---c-----Ccchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 32221 1 01111 01111112235666666666666677888774 678999999986 56678888888777
Q ss_pred HHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 184 FIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
+.+.+..+. +...||++.+.+.+++.++..++..++.||+.
T Consensus 366 G~l~~~~g~----~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 366 GVMVEKMFA----YGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHhcc----ccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 777654331 11147999988888888888888888888863
No 114
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.24 E-value=8.1e-09 Score=94.95 Aligned_cols=174 Identities=15% Similarity=0.123 Sum_probs=108.0
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~ 105 (348)
..++--....+.+.++....+.+-++.. |.+..|..++.........+++-.+|..+||+||||-+.+ ..+...+.-+
T Consensus 80 ~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~-T~l~t~v~~~ 158 (528)
T KOG0253|consen 80 FFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNL-TFLVTGVFGV 158 (528)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhh-hHHHHHHHHH
Confidence 4445445566667766667777777777 9999999999999999999999999999999999998754 3322222222
Q ss_pred HHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018940 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (348)
Q Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~ 185 (348)
+--+ +.+..++.+.+. +.+.|.+. .+-..++-.|.-|. .+|...+-.. ....+|.+....+...
T Consensus 159 is~~---------spnf~~L~~f~~----l~~~g~gg-~pv~~~~yle~lp~-~~r~~~~V~~-~~waig~v~ea~law~ 222 (528)
T KOG0253|consen 159 ISGA---------SPNFASLCVFRA----LWGFGVGG-LPVDSAIYLEFLPS-SHRWLLTVMS-FFWAIGQVFEALLAWG 222 (528)
T ss_pred hhcC---------CCCeehhhHHHH----HHhccCCC-ccHhHHHHHHhccC-cCCCcchhHH-HHHHHHHHHHHHHHHH
Confidence 1110 123333433333 44444444 22233444555543 4676654444 6667777776655434
Q ss_pred HHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 186 VFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
++ ...||||......+ .+..+....++++|++
T Consensus 223 vm----------~~~gwr~~l~~~~~-pl~~~a~f~~w~~ESp 254 (528)
T KOG0253|consen 223 VM----------SNFGWRYLLFTSST-PLMFAARFLVWVYESP 254 (528)
T ss_pred HH----------HhhhHHHHHHHHHh-HHHHHHHHHhhcccCc
Confidence 33 24588887766654 4444555667888853
No 115
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.21 E-value=2.8e-09 Score=102.09 Aligned_cols=169 Identities=12% Similarity=0.061 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 36 NDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
..........++|.|+++.|.|+.+.|.+.++..+...++.++.|+++||+|||+..+ .+....+++...+.. .|
T Consensus 217 ~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~-~~~~l~~~~~~~~~~--~~-- 291 (393)
T PRK09705 217 INGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLM-LALVLQLVGFCGFIW--LP-- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHH-HHHHHHHHHHHHHHH--cc--
Confidence 3344445568899999888999999999999999999999999999999999987754 455454454433221 12
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
. +.... . . .+.+++.+.......+...+..+++++|++..++.+....+++.+++.+.+.+.+..+
T Consensus 292 ---~-~~~~~--~-~---~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g---- 357 (393)
T PRK09705 292 ---L-QLPVL--W-A---MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG---- 357 (393)
T ss_pred ---c-hHHHH--H-H---HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 1 11111 1 1 1334444444444444555555455678899888888888887777766666654322
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 196 ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
.|...+++.++.+.+..++.....||++
T Consensus 358 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 358 -----NYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 2555555555555555555566667754
No 116
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.21 E-value=1.2e-08 Score=101.24 Aligned_cols=253 Identities=14% Similarity=0.041 Sum_probs=145.4
Q ss_pred hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHH
Q 018940 54 IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFA 133 (348)
Q Consensus 54 ~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 133 (348)
+..+.....+..+++.+..+++..++|.++||+|||+.++ .+....++.-..... . .+.. . +.++.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~-~~~~~~~i~~~~~a~--a-------~~~~-~---~~~~R 178 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLL-VSLLLFIIFGILTAF--A-------PNYW-M---FLIFR 178 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHH-HHHHHHHHHHHHHHH--h-------CcHH-H---HHHHH
Confidence 4788889999999999999999999999999999998865 555555544432211 1 2333 2 23333
Q ss_pred HHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHH
Q 018940 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIG 213 (348)
Q Consensus 134 ~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~ 213 (348)
.+.|++.+........+..|+.. +++|+.+..+ ......++..+ ++..+.+ ..+|||.+++..++.
T Consensus 179 fl~G~~~~~~~~~~~~~~~E~~~-~~~R~~~~~~-~~~~~~~~~~~----~~~~a~~--------~~~Wr~~~~~~~~~~ 244 (521)
T KOG0255|consen 179 FLSGFFGSGPLTVGFGLVAEIVS-PKQRGLALTL-GGFFFVGGLML----PAGAAYI--------TRDWRWLFWIISIPS 244 (521)
T ss_pred HHHHhhccchhHHhHhhheeecC-cchhhHHHHH-HHHHHHHHHHH----HHHHHHH--------HhhHHHHHHHHHHHH
Confidence 46777777777777788899985 6899998887 44444444443 2333332 238999999887777
Q ss_pred HHHHHHHHhhccccccc---cc---------cc------CCchhH--------------------HHHHHHHHhHHHHHH
Q 018940 214 CCFVGIFLSRTEEPRLK---MG---------LR------GNSHAR--------------------ISWAYWFKKILYYQV 255 (348)
Q Consensus 214 ~~~~ll~~~~~~e~~~~---~~---------~~------~~~~~~--------------------~~~~~~~~~~~~~~~ 255 (348)
.+..++ +++.+|.+.. ++ ++ .+.+.+ ..+..+++.|+++..
T Consensus 245 ~~~~~~-~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 323 (521)
T KOG0255|consen 245 GLFLLL-WFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYR 323 (521)
T ss_pred HHHHHH-HHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHH
Confidence 766555 5556675321 00 00 000000 112344444443332
Q ss_pred HHHHHHHHHHHHhhhHHHHHH-HhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHh
Q 018940 256 ALVYMLTRLVVNVSQAYLAFY-VINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAG 333 (348)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~y-l~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~ 333 (348)
.+...+.+ ......|+... ..+..|.+.. .........-..+....+.. +|.||| .....+..+..+++++
T Consensus 324 ~~~~~~~~--~~~~~~y~gl~~~~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~--~~~~~~~~~~~~~~~~ 396 (521)
T KOG0255|consen 324 TLYLLFIW--FVFSLVYYGLSLNVSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRR--PPLFLSLFLAGIGLLL 396 (521)
T ss_pred HHHHHHHH--HHHhHHHHhhhhhhhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHH
Confidence 22222222 11122233222 2222333221 11111112233344444554 999999 8889999999999988
Q ss_pred HhhccCCce
Q 018940 334 ILILPMNMS 342 (348)
Q Consensus 334 ~~~~~~~~~ 342 (348)
..+.+.+..
T Consensus 397 ~~~~~~~~~ 405 (521)
T KOG0255|consen 397 FGWLPDDLG 405 (521)
T ss_pred HHHhhccch
Confidence 888865543
No 117
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.19 E-value=1.5e-08 Score=95.51 Aligned_cols=288 Identities=10% Similarity=0.031 Sum_probs=162.6
Q ss_pred hhHHhhhhhHHHHHHHHHHHH--HHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHH
Q 018940 26 VLYYGSGHMLNDITAACWFTY--LLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAV 102 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~--l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i 102 (348)
.+.+++-++.|..-| ..| +..|.++. | |...+-++..++.++......+.-|+.||+|=|... +.+..+.++
T Consensus 47 Ll~~slL~~SN~~qW---I~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~-llgt~ln~i 121 (480)
T KOG2563|consen 47 LLAFSLLNFSNGMQW---IQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL-LLGTVLNGI 121 (480)
T ss_pred HHHHHHHHhcCcchh---eeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH-HHHHHHHHH
Confidence 466666666655433 233 23344554 6 777778889999999999999999999999998775 568888888
Q ss_pred HHHHHhcCcCCCcccCcccch-hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHH
Q 018940 103 SFSSVFGGCMPCRILSTSTLK-VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYA 181 (348)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~ 181 (348)
+.++=.....| ..+.. +-.+... .-.+.+..+..... ..+-+++..-+++||..+......++.+|..++..
T Consensus 122 Ga~Ir~iss~p-----~v~~~f~~~l~~~-Gq~iaa~Aq~Fim~-lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 122 GAWIRLISSLP-----FVPPLFRRPLTHT-GQSIAAAAQPFILG-LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHhhhccCc-----cccccchhhhhHH-hHHHHHHhhhHhhc-cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 87642210111 01111 1111110 00111122211111 11223333335789999998888888888888766
Q ss_pred HHHHHHHhccCCcccchhhHHHH--HHHHHHHHHHHHHHHHHhhcccccccccc-----cCCchhHHHHHHHHHhHHHHH
Q 018940 182 IAFIVFSVSTAKTHADLENQYRW--IAYSSIFIGCCFVGIFLSRTEEPRLKMGL-----RGNSHARISWAYWFKKILYYQ 254 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~g~~~--~~~i~~~i~~~~~ll~~~~~~e~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 254 (348)
+.+.++.. . ..++...|.. .++..++++.+...+..+.-+|+++.++. ..+.+..++.++++||++|..
T Consensus 195 lppilV~~-~---~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~i 270 (480)
T KOG2563|consen 195 LPPILVPS-S---KDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFII 270 (480)
T ss_pred ccceecCC-C---CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHH
Confidence 54333321 1 0112344543 34444445444444444444453322221 112345667889999999988
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 255 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
+.+++.......+...+.+-.-+ ...|.+....+.......+++.+++++++.+ ||.++- |++..+......++.
T Consensus 271 l~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f-k~~~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 271 LAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF-KLTTLVLYLFALVGT 346 (480)
T ss_pred HHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH-HHHHHHHHHHHHHHH
Confidence 87777666555554443332111 1224443345566666778899999999987 998876 555555555555543
No 118
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.17 E-value=1.5e-14 Score=140.72 Aligned_cols=254 Identities=16% Similarity=0.133 Sum_probs=151.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHH
Q 018940 58 PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFN 137 (348)
Q Consensus 58 ~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (348)
..+.+++.+...+...++.++.|.++||+|||+.++ .+..+..++..+... .|. ..+.....+.+ .+.|
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~-~~~~~~~i~~~~~~~--~~~----~~~~~~~~~~R----~~~G 113 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALI-ISALLMIIGSILIAF--APS----YNNFWMLLIGR----FLIG 113 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccc-ccccccccccccccc--ccc----ccccccccccc----cccc
Confidence 356789999999999999999999999999998865 466665565543221 110 01233232333 3677
Q ss_pred HHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHH
Q 018940 138 VGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFV 217 (348)
Q Consensus 138 ~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ 217 (348)
++.+........++.|..+ ++.|++..++.+....+|..++..+.... ... +...+||+.+.+.+++.++.
T Consensus 114 ~~~g~~~~~~~~~~~E~~~-~~~R~~~~~~~~~~~~~G~~~~~~~~~~~-~~~------~~~~~Wr~~~~~~~~~~l~~- 184 (451)
T PF00083_consen 114 FGIGGAYVVSPIYISEIAP-PKHRGFLSSLFQLFWALGILLASLIGYIV-SYY------SDNWGWRILLIFGAIPSLLV- 184 (451)
T ss_pred ccccccccccccccccccc-ccccccccccccccccccccccccccccc-ccc------cccccccccccccccccccc-
Confidence 7777777777788999885 67899998888888778777655443211 111 11357999887776666544
Q ss_pred HHHHhhccccccc-----c-cc------c---------C----Cchh------HHHHHHHHHhHHHH-H---HHHHHHHH
Q 018940 218 GIFLSRTEEPRLK-----M-GL------R---------G----NSHA------RISWAYWFKKILYY-Q---VALVYMLT 262 (348)
Q Consensus 218 ll~~~~~~e~~~~-----~-~~------~---------~----~~~~------~~~~~~~~~~~~~~-~---~~l~~~~~ 262 (348)
++...+.||++.. + ++ + + .++. +..++++++++..+ . ......+.
T Consensus 185 ~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~ 264 (451)
T PF00083_consen 185 LLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQ 264 (451)
T ss_pred cccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccc
Confidence 3344677885310 0 00 0 0 0000 01245566664421 1 12222223
Q ss_pred HHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHh
Q 018940 263 RLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGIL 335 (348)
Q Consensus 263 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~ 335 (348)
+........++..++.++.+.+... ....+..+..+++.+++..+ ||+||| +.+..+..+.+++++.+.
T Consensus 265 ~~~g~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~GRr--~~~i~~~~~~~~~~~~~~ 334 (451)
T PF00083_consen 265 QFSGINFIFYYSPSIFENAGISNSF--LATLILGLVNFLGTLLAIFLIDRFGRR--KLLIIGLLLMAICSLILG 334 (451)
T ss_pred ccccccccccccccccccccccccc--ccccccccccccccccccccccccccc--cccccccccccccccccc
Confidence 2333334445555666666666541 11122334455666666565 999999 888888888777776663
No 119
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.17 E-value=2.1e-09 Score=105.36 Aligned_cols=167 Identities=8% Similarity=-0.033 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH-HHhcCcCCCcccC
Q 018940 41 ACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS-SVFGGCMPCRILS 118 (348)
Q Consensus 41 ~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~-~l~~~~~~~~~~~ 118 (348)
.....++|.|+++. |.|..+.+...+...+...++.++.|+++||+||||..+. ......+... ..+. .
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~-~~~~~~~~~~~~~~~---~----- 345 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA-CIALALIIFTLGVYQ---H----- 345 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH-HHHHHHHHHHHHHHH---h-----
Confidence 34567889999886 9999999999999999999999999999999999887543 2222222221 1111 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHH-HHHHHHHHHHHHHH-hccCCc-c
Q 018940 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMV-ANLSLYAIAFIVFS-VSTAKT-H 195 (348)
Q Consensus 119 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~i-g~~~~~~~~~~~~~-~~~~~~-~ 195 (348)
..+.....+.. .+.+........+......|..| +++|+.+.++.+...++ |..+++.+.+.+.+ ...+.. .
T Consensus 346 ~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~p-~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~ 420 (467)
T PRK09556 346 ATSEYMYLASL----FALGFLVFGPQLLIGVAAVGFVP-KKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIF 420 (467)
T ss_pred cCcHHHHHHHH----HHHHHHHhhHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccc
Confidence 11222121111 12332211111122345557764 67899999998877775 54665555445443 110000 0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHH
Q 018940 196 ADLENQYRWIAYSSIFIGCCFVGIFL 221 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~ll~~ 221 (348)
+....+|+..+.+.++..++..+...
T Consensus 421 ~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 421 GYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred cccccChHHHHHHHHHHHHHHHHHHH
Confidence 00135688888777555555544443
No 120
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.17 E-value=7.4e-09 Score=102.12 Aligned_cols=171 Identities=15% Similarity=0.085 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 37 DITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
....+....++|.|+++. |.+..+.+.......+...++.++.|+++||+|||+.++ .+.+...+.....+. ...
T Consensus 263 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~-~~~~~~~~~~~~~~~-~~~-- 338 (490)
T PRK10642 263 NVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVI-LGSVALFVLAIPAFI-LIN-- 338 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHHHHHHHHHHHH-HHh--
Confidence 344455668899999775 999888888888888889999999999999999998754 444332222211110 001
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
..+........ .+.+++.+.......+..+++.| ++.|++..++.+....+++.+++.+.+.+...
T Consensus 339 ---~~~~~~~~~~~----~~~g~~~~~~~g~~~~~~~~~~p-~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~------ 404 (490)
T PRK10642 339 ---SNVIGLIFAGL----LMLAVILNCFTGVMASTLPAMFP-THIRYSALAAAFNISVLVAGLTPTLAAWLVES------ 404 (490)
T ss_pred ---CCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCC-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 11222121111 13334444444445567777775 57899887764333344444444333333211
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 018940 196 ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 229 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~ 229 (348)
..+|+..+....+.+++..+. .++.||++.
T Consensus 405 ---~~~~~~~~~~~~~~~~i~~~~-~~~~pes~~ 434 (490)
T PRK10642 405 ---TQNLMMPAYYLMVVAVIGLIT-GVTMKETAN 434 (490)
T ss_pred ---hCCchHHHHHHHHHHHHHHHH-HHHhccccC
Confidence 123555554444444444333 345688543
No 121
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.16 E-value=1e-09 Score=103.10 Aligned_cols=155 Identities=17% Similarity=0.090 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccC
Q 018940 39 TAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (348)
Q Consensus 39 ~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~ 118 (348)
.......+.++|.++.|.++.+.+.+.++..+...++.++.|+++||+|||+.+. .+....+++...+.. .+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~--~~----- 291 (377)
T TIGR00890 220 SGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMS-IVFGISAVGMAAMLF--IP----- 291 (377)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-HHHHHHHHHHHHHHH--cc-----
Confidence 3334445666776677999999999999999999999999999999999988754 455555555543321 11
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccch
Q 018940 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADL 198 (348)
Q Consensus 119 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~ 198 (348)
... .... .....+.+.+.+.......++++|..+ +++|++..++.+....+|+.+++.+.+.+. +
T Consensus 292 ~~~-~~~~---~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~----------~ 356 (377)
T TIGR00890 292 MLN-DVLF---LATVALVFFTWGGTISLFPSLVSDIFG-PANSAANYGFLYTAKAVAGIFGGLIASHAL----------T 356 (377)
T ss_pred cch-hHHH---HHHHHHHHHHhccchhccHHHHHHHhh-hhhhhhHhHHHHHHHHHHHHHHHHHHHHHH----------h
Confidence 111 1111 111123445555444455667778774 678999999998888888887766654443 2
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 018940 199 ENQYRWIAYSSIFIGCCF 216 (348)
Q Consensus 199 ~~g~~~~~~i~~~i~~~~ 216 (348)
..||++.+.+.+++.++.
T Consensus 357 ~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 357 EIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhchhhHHHHHHHHHHHh
Confidence 457888887776655543
No 122
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.14 E-value=1.6e-09 Score=102.14 Aligned_cols=270 Identities=14% Similarity=0.085 Sum_probs=143.1
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHH
Q 018940 56 LSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAI 135 (348)
Q Consensus 56 ~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 135 (348)
.++...+.+-.+..+..+++|.++|++.||+||||.+. ...+++.++.+..- +|... ++.........+...+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG-~~liImIi~t~~~~---~s~~~---~~~~~~m~~L~~~R~~ 153 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYG-KELIIMIICSALSG---LSVGT---TSPLGVMMTLCFFRFL 153 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhh-HHHHHHHHHHHHhc---cCCCC---CCCcchhhHHHHHHHH
Confidence 67788899999999999999999999999999999975 45566666665332 23221 1111111222222346
Q ss_pred HHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccC----Cc-ccchhhHHHHHHHHHH
Q 018940 136 FNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA----KT-HADLENQYRWIAYSSI 210 (348)
Q Consensus 136 ~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~----~~-~~~~~~g~~~~~~i~~ 210 (348)
+|+|.+.-++-..+..+|.+ +++.|+...+.....+..|...+++++..+...+-. .. ....+.-||..+-+.+
T Consensus 154 LGiGIGGDYPlSAtI~SE~a-n~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~ 232 (538)
T KOG0252|consen 154 LGIGIGGDYPLSATIMSESA-NKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGA 232 (538)
T ss_pred hhccccCCCcchHHHhhhhh-hhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHH
Confidence 77877765555555556655 567788765544444455544444444333332211 10 0012345998886655
Q ss_pred HHHHHHHHHHHhhcccccccc-----c-----cc-CC----------------chhHHH---HHHHHHh---HHHHHHHH
Q 018940 211 FIGCCFVGIFLSRTEEPRLKM-----G-----LR-GN----------------SHARIS---WAYWFKK---ILYYQVAL 257 (348)
Q Consensus 211 ~i~~~~~ll~~~~~~e~~~~~-----~-----~~-~~----------------~~~~~~---~~~~~~~---~~~~~~~l 257 (348)
++++ ..+.....+||++.-+ . ++ ++ ..++.. +...+.. +++.-.++
T Consensus 233 vpa~-~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~ 311 (538)
T KOG0252|consen 233 VPAL-LVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAG 311 (538)
T ss_pred HHHH-HHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 5444 4455556678853211 0 00 00 001111 1122221 22233444
Q ss_pred HHHHHHHHHHhhhHHHHHHHhhcccccchh--------hhHHhHHHH-HHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHH
Q 018940 258 VYMLTRLVVNVSQAYLAFYVINDLRMGQSA--------KALVPAIIY-ICSFIVSILLQEM-AWTGQRLKAYYSAGGVLW 327 (348)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~--------~~~~~~~~~-~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~ 327 (348)
..++.-.+.+....+...-+. +.+..+.. .+....+.. .+.+.|..+.... |++||| .+-.-|..++
T Consensus 312 ~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk--~iq~~GF~~~ 388 (538)
T KOG0252|consen 312 TWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK--YIQLMGFFIM 388 (538)
T ss_pred HHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH--HHHHhhHHHH
Confidence 555555566666655554444 23433321 111112211 2223344444444 999999 8888888777
Q ss_pred HHHHHhHhhc
Q 018940 328 VFCGAGILIL 337 (348)
Q Consensus 328 ~v~~~~~~~~ 337 (348)
++-.+.+.+.
T Consensus 389 ~i~~~~~~~~ 398 (538)
T KOG0252|consen 389 TIFFFVIAGP 398 (538)
T ss_pred HHHHHHHcCC
Confidence 7766555544
No 123
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.14 E-value=6.1e-09 Score=99.97 Aligned_cols=167 Identities=13% Similarity=0.094 Sum_probs=104.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCC
Q 018940 34 MLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMP 113 (348)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~ 113 (348)
+...........++|.|+++.|.|+.+.+.+.....+...++.++.|+++||+||||+....+.+..++....+.. .|
T Consensus 232 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~--~~ 309 (402)
T TIGR00897 232 IINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYY--IP 309 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH--HH
Confidence 3334444455678888887779999999999999999999999999999999999887533333333333222110 11
Q ss_pred CcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018940 114 CRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK 193 (348)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~ 193 (348)
.. ...+.....+. ..+.+.+.+.. .+..+...+.. |++|++..++.+....+|+.+++.+.+.+++
T Consensus 310 ~~--~~~~~~~~~~~----~~~~G~~~~~~-~~~~~~~~~~~--~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~----- 375 (402)
T TIGR00897 310 QH--FGHSFAVALII----AIALGIFLAGY-VPLAAVFPTLA--PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIG----- 375 (402)
T ss_pred Hc--cCCcHHHHHHH----HHHHHHHHHHH-HHHHHHHHhhC--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 00 01122211111 12445444443 34445555543 4689999999999988888887766655553
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHH
Q 018940 194 THADLENQYRWIAYSSIFIGCCFVGIFL 221 (348)
Q Consensus 194 ~~~~~~~g~~~~~~i~~~i~~~~~ll~~ 221 (348)
..|++..+.+.+++.++..++.+
T Consensus 376 -----~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 376 -----FFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred -----hcchHHHHHHHHHHHHHHHHHHH
Confidence 34677777777666665555544
No 124
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.12 E-value=1.4e-08 Score=97.18 Aligned_cols=161 Identities=12% Similarity=0.029 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCccc
Q 018940 39 TAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (348)
Q Consensus 39 ~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~ 117 (348)
.......++|.|+++. |.++.+.|.+.+...+...++.++.|+++||+||||.+. .+.....+....... +
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~-~~~~~~~~~~~~~~~---~---- 302 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMR-VAAVAGVCFYAGMLM---A---- 302 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH-HHHHHHHHHHHHHHH---H----
Confidence 3344456788888776 999999999988888888889999999999999998653 444443333322211 1
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 018940 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (348)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
.+......... +.+++.+.......+...|..| ++|+++.++.+...++|..+++.+.+.+.+
T Consensus 303 --~~~~~~l~~~~----l~~~~~g~~~~~~~~~~~~~~p--~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~--------- 365 (393)
T PRK15011 303 --HSPAILLGLQL----LNAIYIGILGGIGMLYFQDLMP--GQAGSATTLYTNTSRVGWIIAGSLAGIVAE--------- 365 (393)
T ss_pred --hhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 12222211111 2222333322233345566653 468888888888888888887776655542
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018940 198 LENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (348)
Q Consensus 198 ~~~g~~~~~~i~~~i~~~~~ll~~~~~~e 226 (348)
..+|+..+.+.+++.++..++ .+..||
T Consensus 366 -~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 392 (393)
T PRK15011 366 -IWNYHAVFWFALVMIIATLFC-LLRIKD 392 (393)
T ss_pred -HhhhHHHHHHHHHHHHHHHHH-HHhhcC
Confidence 347888887766555554433 344454
No 125
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.11 E-value=4.9e-09 Score=96.73 Aligned_cols=162 Identities=10% Similarity=-0.030 Sum_probs=99.7
Q ss_pred CCCCCCCCCCCCchHhhHHhhhhhHHHHHHHHH------HHHHHHHHHhh-----CCChhHHHHHHHHHHHHHHhhhhhh
Q 018940 11 IENDDSFTQPVGRWSVLYYGSGHMLNDITAACW------FTYLLLFLTDI-----GLSPRGAAAVMLSGQIADGFATIFI 79 (348)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~l~~~~~~~-----g~s~~~~g~i~~~~~i~~~i~~p~~ 79 (348)
.++|+++++..+.++...-++..+..-+...+. ..+....++.. +.+..-.|.+-+.+.+...+.+|.+
T Consensus 9 ~~~kk~q~~g~P~~~~~~v~vv~~~~ll~l~~~~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~ 88 (451)
T KOG2615|consen 9 ALRKKEQKRGFPALALDVVAVVSLSLLLPLLLVSSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLW 88 (451)
T ss_pred ccchHHHhcCCchhhcceeeeeehhhhhhHhhccchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhh
Confidence 455677777777776544444444333322111 12222222221 3355678999999999999999999
Q ss_pred HhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc
Q 018940 80 GELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST 159 (348)
Q Consensus 80 G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 159 (348)
|.++||+|||.. ++.+++..+++.. +|. . +.+.. . +.+..++.|...+- -....|+++|+.+ +|
T Consensus 89 G~~SD~yGRkpv-ll~c~~~va~s~l-l~~--~------S~~F~-a---fv~aR~l~Gi~kgn-l~v~rAiisdV~s-ek 152 (451)
T KOG2615|consen 89 GCLSDRYGRKPV-LLACLIGVALSYL-LWA--L------SRNFA-A---FVLARFLGGIFKGN-LSVIRAIISDVVS-EK 152 (451)
T ss_pred hhhhhhhCchHH-HHHHHHHHHHHHH-HHH--H------HHHHH-H---HHHHHHhhhhccCc-hHHHHHHHHhhcC-hh
Confidence 999999999755 6677777777553 331 0 11221 2 22212344554433 3346689999985 58
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 160 SRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 160 ~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
+|+...+.......+|-++++.+++-+..
T Consensus 153 ~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 153 YRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hccceeeeeehhhhcchhhcchhhhHHHh
Confidence 99998888777778888777766554443
No 126
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.10 E-value=8.5e-09 Score=98.76 Aligned_cols=134 Identities=14% Similarity=0.105 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccC
Q 018940 39 TAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (348)
Q Consensus 39 ~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~ 118 (348)
.......++|.|+++.|.++.+.|.+.+...+...++.++.|+++||+||||.+. .+.+...+....+.. .+
T Consensus 235 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~--~~----- 306 (406)
T PRK11551 235 VLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVL-LIYAGILASLAALAA--AP----- 306 (406)
T ss_pred HHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHHHHHHh--cC-----
Confidence 3344557788888888999999999999999999999999999999999988754 344444444332221 11
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 119 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
+.....+ ...+.+.+.+.......++.++..+ +++|++..++.+....+|..+++.+.+.+.
T Consensus 307 --~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 368 (406)
T PRK11551 307 --SFAGMLL----AGFAAGLFVVGGQSVLYALAPLFYP-TQVRGTGVGAAVAVGRLGSMAGPLLAGQLL 368 (406)
T ss_pred --cHHHHHH----HHHHHHHHHHhHHHHHHHHHHHHcc-hhhhhhhhhHHHHhhhHHHHHHhhhHhhhh
Confidence 2221111 1124455555555566678888875 578999999988888888877766655544
No 127
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.10 E-value=6.8e-09 Score=100.03 Aligned_cols=245 Identities=9% Similarity=0.041 Sum_probs=138.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhh--CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCC-chHHHHHHHHHHHHHHHH
Q 018940 30 GSGHMLNDITAACWFTYLLLFLTDI--GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGH-FKIWHGAGSVLVAVSFSS 106 (348)
Q Consensus 30 ~~g~~~~~~~~~~~~~~l~~~~~~~--g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Gr-rr~~i~~~~~~~~i~~~~ 106 (348)
.+.++....-.++..+=.-+|++++ +.+++..|++.+...+..++.+|.+|+.+.|.|+ |||++ .+.+..+++-.
T Consensus 40 ~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli-~s~ii~~~g~l- 117 (488)
T KOG2325|consen 40 LLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI-VSFLIAIIGNL- 117 (488)
T ss_pred HHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH-HHHHHHHHHHH-
Confidence 3334444444433334445788885 8888999999999999999999999999999986 88964 68888777763
Q ss_pred HhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (348)
Q Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~ 186 (348)
++. ++.. .+..........| ++.|+|.+.. ..+-+++++.+ ..+||.++.+....+..+|.++++.+ ++.
T Consensus 118 lY~-~l~~--~~~~~~y~mL~~R----~l~Gvg~~n~-a~lR~Y~a~~s-~~~dR~rA~a~~~~~~vlg~ilGp~~-q~~ 187 (488)
T KOG2325|consen 118 LYL-ALAY--VPNGVKYLMLVAR----ILTGVGVGNF-AVLRAYIADAS-TVEDRPRAFAATSGGFVLGIILGPTI-QLA 187 (488)
T ss_pred HHH-HHHh--cccchHHHHHHHH----HHcCcCcccH-HHHHHHHHhcc-CccchHHHHHHhhhHHHHHHHHhHHH-HHH
Confidence 221 0111 1111222233333 3556665433 33566777765 36789998887766667777776655 344
Q ss_pred HHhccCCc----ccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccC------CchhHHHHHHHHHhHHHHH--
Q 018940 187 FSVSTAKT----HADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG------NSHARISWAYWFKKILYYQ-- 254 (348)
Q Consensus 187 ~~~~~~~~----~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-- 254 (348)
+..++.+. ++..-..+..+.++.+++.++..++..+..+|.+.+..+++ +++.++..+ .-|.++..
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~~ 265 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSDIEKVK--KPKLDWVAVL 265 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhccchhhhc--cCChhHHHHH
Confidence 44444221 00011124445556667777777777788888644322111 111111111 11223222
Q ss_pred -HHHHHHHHHHHHHhhhHHHHHHHhhcccccchhh
Q 018940 255 -VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAK 288 (348)
Q Consensus 255 -~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 288 (348)
+.+..+...+......+-.+....+..+...++.
T Consensus 266 vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~a 300 (488)
T KOG2325|consen 266 VCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEA 300 (488)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhccccchH
Confidence 2333444445555545566666666667665543
No 128
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.09 E-value=1.3e-08 Score=97.22 Aligned_cols=162 Identities=15% Similarity=0.057 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCccc
Q 018940 38 ITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (348)
Q Consensus 38 ~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~ 117 (348)
........+++.|+++.|.+ +.+.......+...++.++.|++.||+||||.+ ..+....+++...+.. .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~-~~~~~~~~~~~~~~~~---~---- 299 (399)
T PRK05122 230 IGFGTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVA-IVSLLVEILGLLLLWL---A---- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHHH---h----
Confidence 33445567888888776663 445666777888888999999999999998865 3455555555433321 1
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 018940 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (348)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
.+..... +...+.+++.+.......+...+.. ++++|++..++.+....+|..+++.+.+.+.
T Consensus 300 --~~~~~~~----~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~---------- 362 (399)
T PRK05122 300 --PSPWMAL----IGAALTGFGFSLVFPALGVEAVKRV-PPQNRGAALGAYSVFLDLSLGITGPLAGLVA---------- 362 (399)
T ss_pred --ccHHHHH----HHHHHHHHhHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 1222121 1123566666655555455566665 4678999999988888888776655544433
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018940 198 LENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (348)
Q Consensus 198 ~~~g~~~~~~i~~~i~~~~~ll~~~~~~e 226 (348)
+..||++.+.+.+++.++..++..+..++
T Consensus 363 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 363 SWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 23478888887776666655555544333
No 129
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.09 E-value=1.5e-09 Score=87.04 Aligned_cols=136 Identities=16% Similarity=0.043 Sum_probs=90.8
Q ss_pred HHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018940 66 LSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQV 145 (348)
Q Consensus 66 ~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 145 (348)
+...+...+.+++.|+++||+||||.++ .+.....+....... . .+....... ..+.+.+.+....
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~-~~~~~~~~~~~~~~~---~------~~~~~~~~~----~~~~g~~~~~~~~ 70 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLL-VGLFIFVLSTAMFAL---S------SNITVLIIA----RFLQGFGAAFALV 70 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHH-HHHHHHHHHHHHHHH---h------ccHHHHHHH----HHHHHHHHHHHHH
Confidence 3456777889999999999999998865 455555555433321 1 122222121 2356677777777
Q ss_pred hHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018940 146 AHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTE 225 (348)
Q Consensus 146 ~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~ 225 (348)
...++..|..+ +++|++..+..+....+|..+++.+.+.+. +..+|++.+.+.+++.++..+...+..|
T Consensus 71 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 71 AGAALIADIYP-PEERGVALGLMSAGIALGPLLGPPLGGVLA----------QFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hHHHHHHHHCC-hhhhhHHHHHHHHhHHHHHHHhHHhHHHHh----------cccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 77788888874 578999999988888888877766554433 1346888888777777666666666555
Q ss_pred c
Q 018940 226 E 226 (348)
Q Consensus 226 e 226 (348)
|
T Consensus 140 ~ 140 (141)
T TIGR00880 140 E 140 (141)
T ss_pred C
Confidence 5
No 130
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.08 E-value=1.2e-08 Score=99.04 Aligned_cols=171 Identities=10% Similarity=-0.005 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhccc--CCchHHHHHHHHHHHHHHHHHhcC
Q 018940 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRF--GHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~--Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
+........+..++|.|+++. |.|..+.+...+...+...++.++.|+++||+ ++|++......+...+....+..
T Consensus 253 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~- 331 (434)
T PRK11663 253 VLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL- 331 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH-
Confidence 333444445567889999775 99999999999999999999999999999998 33444322222222222211111
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~ 190 (348)
.+ ..+.......+ ...+.+............+|.. ++++|++..++.+....+|+.+++.+.+.+.+
T Consensus 332 -~~-----~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~-- 398 (434)
T PRK11663 332 -MP-----FASYVMQAACF----FTIGFFVFGPQMLIGMAAAECS-HKEAAGAATGFVGLFAYLGAALSGYPLAKVLE-- 398 (434)
T ss_pred -cc-----cccHHHHHHHH----HHHHHHHhhHHHHHHHHHHhcc-cHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH--
Confidence 12 11211111111 1222211111111223445655 46789999999999999988887666555442
Q ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018940 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (348)
Q Consensus 191 ~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e 226 (348)
..||+..++..+++.++..+...+..++
T Consensus 399 --------~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 399 --------IWHWTGFFVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred --------hcccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3568888887777777766666555554
No 131
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.07 E-value=1.2e-11 Score=122.56 Aligned_cols=285 Identities=10% Similarity=0.039 Sum_probs=1.4
Q ss_pred HHHHHHHHHHH----hhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCccc
Q 018940 42 CWFTYLLLFLT----DIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (348)
Q Consensus 42 ~~~~~l~~~~~----~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~ 117 (348)
+...|...-++ +++++.++.|++.+.+-+...+..++..++.+|. +|..|+-.|.++++++.++.. +|....
T Consensus 17 ~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~---lPhf~~ 92 (539)
T PF03137_consen 17 MVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFA---LPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHh---ccHhhc
Confidence 33445444333 3499999999999999999999999999999985 556678888888888875432 454221
Q ss_pred Cc---------------------------------------ccchh-HHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccC
Q 018940 118 ST---------------------------------------STLKV-ETISYCVFAAIFNVGWAATQVAHMSMVNCITLN 157 (348)
Q Consensus 118 ~~---------------------------------------~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 157 (348)
+. .+... ....+++.-++.|+|.+..++--.+++.|.++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~- 171 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVS- 171 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccc-
Confidence 10 00000 01111111123444444444444567777663
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc----------ccchh-h-HHHHHHHHHHHHHHHHHHHHHhhcc
Q 018940 158 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT----------HADLE-N-QYRWIAYSSIFIGCCFVGIFLSRTE 225 (348)
Q Consensus 158 ~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~----------~~~~~-~-g~~~~~~i~~~i~~~~~ll~~~~~~ 225 (348)
+++-....++.+....+|..++..+++..+....+.+ +.|+. . .|..-|++.+++.++.++..+.+-|
T Consensus 172 ~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk 251 (539)
T PF03137_consen 172 KKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPK 251 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 4455566777777777777776666655554322210 11111 1 3655566677766666655544433
Q ss_pred ccccc---------cccc-----------CC---------chhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 018940 226 EPRLK---------MGLR-----------GN---------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFY 276 (348)
Q Consensus 226 e~~~~---------~~~~-----------~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y 276 (348)
+-+.. ++++ ++ ++.....+.+++||.+....+...+......+..+|.|+|
T Consensus 252 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKy 331 (539)
T PF03137_consen 252 KLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKY 331 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 31111 0000 00 1112235678899998888888877788889999999999
Q ss_pred HhhcccccchhhhHHhHH-HHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHH
Q 018940 277 VINDLRMGQSAKALVPAI-IYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCG 331 (348)
Q Consensus 277 l~~~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~ 331 (348)
++.+.+.+++.++++..+ ..-++.+|.+++|++ +|++-+.|+......+...++.
T Consensus 332 lE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~ 388 (539)
T PF03137_consen 332 LESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSV 388 (539)
T ss_dssp ---------------------------------------------------------
T ss_pred HHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 999999998766644333 323556788888987 9988766666555555444444
No 132
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.07 E-value=9e-09 Score=95.52 Aligned_cols=164 Identities=16% Similarity=0.174 Sum_probs=116.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCch-HHHHHHHHHHHHHHHHHhc
Q 018940 32 GHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFK-IWHGAGSVLVAVSFSSVFG 109 (348)
Q Consensus 32 g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr-~~i~~~~~~~~i~~~~l~~ 109 (348)
..+...........+.+.+.++. |.++.+.+.+.....+...++.++.|+++||+|||+ .+ ..+.....++......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 183 AFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL-LIGLLLAALGLLLLAL 261 (352)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHH
Confidence 33344444455567888888887 999999999999999999999999999999999988 54 4566666665543321
Q ss_pred CcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018940 110 GCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (348)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~ 189 (348)
. .+.....+. ..+.+.+.+.......++..|..+ +|+|++..+..+....+|..+++.+.+.+.+
T Consensus 262 --~-------~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~- 326 (352)
T cd06174 262 --A-------PSLALLLVA----LLLLGFGLGFAFPALLTLASELAP-PEARGTASGLFNTFGSLGGALGPLLAGLLLD- 326 (352)
T ss_pred --h-------ccHHHHHHH----HHHHHHHHhccchhHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 1 122222121 235677777777778888888874 5889999999999988888887666555432
Q ss_pred ccCCcccchhhHHHHHHHHHHHHHHHHHHHH
Q 018940 190 STAKTHADLENQYRWIAYSSIFIGCCFVGIF 220 (348)
Q Consensus 190 ~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~ 220 (348)
..+|++.+.+.+++.++..++.
T Consensus 327 ---------~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 327 ---------TGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred ---------ccCcchHHHHHHHHHHHHHHHh
Confidence 3567888877777666655443
No 133
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.07 E-value=6.3e-09 Score=104.24 Aligned_cols=291 Identities=10% Similarity=0.046 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHh----hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCccc
Q 018940 42 CWFTYLLLFLTD----IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (348)
Q Consensus 42 ~~~~~l~~~~~~----~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~ 117 (348)
+...|+..-.+. ++++.++.|++.+.+-+...+...++.+..-|..|- .|+-.|.++++++.++.. +|..+.
T Consensus 111 l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP-r~Ig~G~~~m~lgsll~a---lPHf~~ 186 (735)
T KOG3626|consen 111 LYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP-RWIGIGLVLMGLGSLLFA---LPHFFS 186 (735)
T ss_pred hhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc-ceeeechhHHHHHHHHHh---ChHHhc
Confidence 334555444432 399999999999999999999999999999887664 467788888888876543 352111
Q ss_pred ----------------C----------------------c----ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcc
Q 018940 118 ----------------S----------------------T----STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCIT 155 (348)
Q Consensus 118 ----------------~----------------------~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~ 155 (348)
+ . .+.....+.+.+.-.+.|+|.+...+--.+++.|.+
T Consensus 187 ~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnv 266 (735)
T KOG3626|consen 187 GPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNV 266 (735)
T ss_pred CcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccc
Confidence 0 0 000001112221113444554444444445666655
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--c-----ccchhh--HHHHHHHHHHHHHHHHHHHHHhhccc
Q 018940 156 LNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK--T-----HADLEN--QYRWIAYSSIFIGCCFVGIFLSRTEE 226 (348)
Q Consensus 156 ~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~--~-----~~~~~~--g~~~~~~i~~~i~~~~~ll~~~~~~e 226 (348)
. +++-....++.++...+|.+++..++........+. + ..|+.+ .|+.-|++++.+.++.++..+++-+|
T Consensus 267 k-~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~ 345 (735)
T KOG3626|consen 267 K-KKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKE 345 (735)
T ss_pred c-ccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 3 334456677777777777777766665555543321 0 112211 46666888888888888777776655
Q ss_pred ccccc-----c-------cc----CC-------chhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccc
Q 018940 227 PRLKM-----G-------LR----GN-------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM 283 (348)
Q Consensus 227 ~~~~~-----~-------~~----~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~ 283 (348)
.+... + ++ ++ ++.....+.+++||-+....+...+......+..+|+|.|++.+++.
T Consensus 346 lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~ 425 (735)
T KOG3626|consen 346 LPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGI 425 (735)
T ss_pred CccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCC
Confidence 33211 0 00 00 12233567889999988888888888888999999999999999999
Q ss_pred cchhhhHHhHHHHH-HHHHHHHHHHHH-HHhhhhhhHHHHHHHHH---HHHHHHhHhhc
Q 018940 284 GQSAKALVPAIIYI-CSFIVSILLQEM-AWTGQRLKAYYSAGGVL---WVFCGAGILIL 337 (348)
Q Consensus 284 ~~~~~~~~~~~~~~-~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l---~~v~~~~~~~~ 337 (348)
++..+.++.....+ +..+|.+++|++ +|+.-+.|.+..+.++. ..+++...+++
T Consensus 426 sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~i 484 (735)
T KOG3626|consen 426 SASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFI 484 (735)
T ss_pred CHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEe
Confidence 98766655433333 445677888887 88887765554444443 33333444444
No 134
>PRK03545 putative arabinose transporter; Provisional
Probab=99.06 E-value=2.6e-08 Score=95.11 Aligned_cols=160 Identities=11% Similarity=0.022 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
....++++|+++. |.|+.+.|.+.+...+...+++++.|+++||+|||+. . .+.....++...+.. .+ .
T Consensus 223 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~-~~~~~~~~~~~~l~~--~~------~ 292 (390)
T PRK03545 223 TAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-L-IAIALLLVCLLLLLP--AA------N 292 (390)
T ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-H-HHHHHHHHHHHHHHH--Hh------c
Confidence 3456788888886 9999999999999999999999999999999998754 3 333333333322211 01 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
+.....+ ...+.+++.........+.+.+.. +++|+++.++.+....+|..+++.+.+.+.+ ..
T Consensus 293 ~~~~~~~----~~~l~g~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~----------~~ 356 (390)
T PRK03545 293 SEWHLSV----LSIFWGIAIMCIGLAMQVKVLKLA--PDATDVAMALFSGIFNIGIGAGALLGNQVSL----------HL 356 (390)
T ss_pred hHHHHHH----HHHHHHHHHhcchHHHHHHHHHhC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cc
Confidence 2221111 112455555544444556666654 3578888888877777887776666555442 35
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccc
Q 018940 201 QYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~~ll~~~~~~e~ 227 (348)
|++..+...+.+.++..++.....+++
T Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
T PRK03545 357 GLSSIGYVGAALALAALVWSILIFRRF 383 (390)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHcccc
Confidence 677777777777766666666655543
No 135
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.06 E-value=2e-08 Score=96.80 Aligned_cols=162 Identities=10% Similarity=-0.060 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
....++|.|.++. |.++.+.|++.+...+...++.++.|++.||.+++|.+ ..+....++....+.. .+
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l-~~~~~~~~~~~~~~~~--~~------- 310 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLM-LLSTLGSFLAVGLFGL--MP------- 310 (417)
T ss_pred hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHH-HHHHHHHHHHHHHHHc--cc-------
Confidence 3456788899885 99999999999999999999999999999997776654 4455555555433221 11
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
+...... ...+.+.+.+.......+.+.+..+ +++|++..++.+....+|..+++.+.+.+.+. .
T Consensus 311 ~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~----------~ 375 (417)
T PRK10489 311 MWILAVL----CLALFGYLSAISSLLQYTLLQTQTP-DEMLGRINGLWTAQNVTGDAIGAALLGGLGAM----------M 375 (417)
T ss_pred hHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhCC-HHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH----------h
Confidence 2111111 1124555555555555677777764 56799999999888888888887776666532 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 201 QYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
|.+..+.+.+++..+..++....++|.+
T Consensus 376 g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 376 TPVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 4555566666666565566666666643
No 136
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.05 E-value=2e-08 Score=94.86 Aligned_cols=159 Identities=11% Similarity=0.049 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc
Q 018940 41 ACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (348)
Q Consensus 41 ~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~ 119 (348)
.....++|.|+++. |.++.+.|.+.........+..++.|+++||+||||.+. .+.+...+....... .
T Consensus 216 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-~~~~~~~~~~~~~~~---------~ 285 (375)
T TIGR00899 216 ILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLML-LAALAGVAFYTGLAA---------D 285 (375)
T ss_pred HHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHH-HHHHHHHHHHHHHHH---------H
Confidence 34456678888775 999999999988888888888999999999999998754 344333333222110 0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchh
Q 018940 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199 (348)
Q Consensus 120 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 199 (348)
.+.+.... ...+.+.+.+.......+...|..+ ++|++..+..+...++|..+++.+.+.+.+ .
T Consensus 286 ~~~~~~~~----~~~~~g~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~----------~ 349 (375)
T TIGR00899 286 NSLWALLM----LQLLNAIFIGILAGIGMLYFQDLMP--GRAGAATTLYTNTGRVGWIIAGSVGGILAE----------R 349 (375)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------h
Confidence 12221111 1124455555555555566777653 456788888887777888777666555442 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018940 200 NQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (348)
Q Consensus 200 ~g~~~~~~i~~~i~~~~~ll~~~~~~e 226 (348)
.||+..+.+.++..++..++. ..+||
T Consensus 350 ~g~~~~~~~~~~~~~~~~~~~-~~~~~ 375 (375)
T TIGR00899 350 WSYHAVYWFAIVMLIVALFCL-LLIKD 375 (375)
T ss_pred ccchhHHHHHHHHHHHHHHHH-heecC
Confidence 467777777666555544443 33443
No 137
>PRK10504 putative transporter; Provisional
Probab=99.05 E-value=3.3e-08 Score=96.81 Aligned_cols=144 Identities=11% Similarity=-0.034 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCC
Q 018940 35 LNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMP 113 (348)
Q Consensus 35 ~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~ 113 (348)
...........+.|.|++.. |.++.+.|++.....+...+..++.|+++||+||||.+. .+....++....+.. .+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~-~~~~~~~~~~~~~~~--~~ 348 (471)
T PRK10504 272 AGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLV-ATTLGLALVSLLFML--VA 348 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH-HHHHHHHHHHHHHHh--cc
Confidence 33333444445667777765 999999999999999999999999999999999988754 455555555433321 11
Q ss_pred CcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018940 114 CRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (348)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~ 190 (348)
..+..+... +...+.+++.+....+..++..+..+ +++|+..+++.+....+|..+++.+.+.+++..
T Consensus 349 -----~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 349 -----LLGWYYLLP---FVLFLQGMVNSTRFSSMNTLTLKDLP-DNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred -----ccccHHHHH---HHHHHHHHHHHHHHHHHHHHHHHcCC-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111111 11124456666666667777777764 578999999988888899888888877776654
No 138
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.05 E-value=1.9e-08 Score=98.22 Aligned_cols=171 Identities=9% Similarity=-0.044 Sum_probs=96.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhccc--CCchHHHHHHHHHHHHHHHHH
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRF--GHFKIWHGAGSVLVAVSFSSV 107 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~--Grrr~~i~~~~~~~~i~~~~l 107 (348)
+..+...........++|.|+++. |.+..+.+.+..+..+...++.++.|+++||+ |||+..........+++...+
T Consensus 260 l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~ 339 (452)
T PRK11273 260 IANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVY 339 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHH
Confidence 333333444455568999999986 99999999999999999999999999999998 444432222222222332222
Q ss_pred hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHH-HHHHHHHH
Q 018940 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLS-LYAIAFIV 186 (348)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~-~~~~~~~~ 186 (348)
.. .+ ..+.....+ . ...++.+.........++..|..+ +++|++.+++.+....+|+.+ ++.+.+.+
T Consensus 340 ~~--~~-----~~~~~~~~~--~--~~~~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l 407 (452)
T PRK11273 340 WL--NP-----AGNPTVDMA--C--MIVIGFLIYGPVMLIGLHALELAP-KKAAGTAAGFTGLFGYLGGSVAASAIVGYT 407 (452)
T ss_pred HH--hc-----ccChHHHHH--H--HHHHHHHHHhHHHHHHHHHHHHcC-hhhhhhHHHHHHHHHHHHHHHhhhhhHHHH
Confidence 11 11 111111111 1 112222211111122344556664 578999999887776676544 34443333
Q ss_pred HHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 018940 187 FSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSR 223 (348)
Q Consensus 187 ~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~ 223 (348)
. +..||+..+.++++.+++..+....+
T Consensus 408 ~----------~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 408 V----------DFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred H----------HHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 3 24568888877766655554444433
No 139
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.05 E-value=7e-09 Score=97.75 Aligned_cols=173 Identities=10% Similarity=-0.007 Sum_probs=106.0
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHH-
Q 018940 26 VLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS- 103 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~- 103 (348)
.....+..+...........+++.|+++. |.|+.+.|.+.++..+...++.++.|+++||+|||+..+........+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
T TIGR00893 217 VWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAG 296 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Confidence 34444555555566666778899999886 9999999999999999999999999999999999862221111111111
Q ss_pred ---HHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHH
Q 018940 104 ---FSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (348)
Q Consensus 104 ---~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~ 180 (348)
....+. .+ ..+..+..... ...+.+.........++.+|..+ +++|++..++.+....+|..+++
T Consensus 297 ~~~~~~~~~--~~-----~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~~~~ 364 (399)
T TIGR00893 297 LVLSLLMFA--TN-----YVNIPYAALAL----VALGFFGLGAGAIGWALISDNAP-GNIAGLTGGLINSLGNLGGIVGP 364 (399)
T ss_pred HHHHHHHHH--hc-----cchhHHHHHHH----HHHHHhchhhhhHHHHHHHhhcC-hhHHHHHHHHHHHHHHHhhhhhh
Confidence 111111 01 01111111111 12222222245566778888874 67899999999888888887766
Q ss_pred HHHHHHHHhccCCcccchhhH-HHHHHHHHHHHHHHHHHHH
Q 018940 181 AIAFIVFSVSTAKTHADLENQ-YRWIAYSSIFIGCCFVGIF 220 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~g-~~~~~~i~~~i~~~~~ll~ 220 (348)
.+.+.+.+ ..| |++.+.+.+++.++..+..
T Consensus 365 ~i~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 365 IVIGAIAA----------TTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHhhhhcc----------CCCchhHHHHHHHHHHHHHHHHH
Confidence 55444332 234 7777776666555554443
No 140
>PRK12382 putative transporter; Provisional
Probab=99.04 E-value=2.1e-08 Score=95.77 Aligned_cols=159 Identities=18% Similarity=0.064 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCccc
Q 018940 38 ITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (348)
Q Consensus 38 ~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~ 117 (348)
........+.+.|+++.|.+. .+.......+...+++++.|++.||+||||.. ..+....+++...+.. .+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-~~~~~~~~~~~~~~~~--~~---- 300 (392)
T PRK12382 230 VGFAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA-IVSLLVETVGLLLLWL--AP---- 300 (392)
T ss_pred HHHhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh-HHHHHHHHHHHHHHHH--cc----
Confidence 334455677888887777654 45566677788888999999999999998875 4555555555543321 11
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 018940 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (348)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
+.....+. ..+.+++++.......+...+.. ++|+|++..++.+....+|..+++.+.+.+.
T Consensus 301 ---~~~~~~~~----~~l~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~---------- 362 (392)
T PRK12382 301 ---TAWVALAG----AALTGAGCSLIFPALGVEVVKRV-PSQVRGTALGGYAAFQDIAYGVSGPLAGMLA---------- 362 (392)
T ss_pred ---cHHHHHHH----HHHHHHHHHhHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 22212111 12556666655555566666766 4678999999998888888887766655544
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhh
Q 018940 198 LENQYRWIAYSSIFIGCCFVGIFLSR 223 (348)
Q Consensus 198 ~~~g~~~~~~i~~~i~~~~~ll~~~~ 223 (348)
+..||++.+.+.+++.++..++..+.
T Consensus 363 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 363 TSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 24578888888777666666555444
No 141
>PRK03699 putative transporter; Provisional
Probab=99.04 E-value=3.1e-08 Score=94.80 Aligned_cols=156 Identities=7% Similarity=-0.034 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 37 DITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
......+..++|.|+++. |.|+.+.|.+.+...+...++.++.|+++||+||||.+.. .....++....+.. .
T Consensus 218 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~-~~~~~~~~~~~~~~---~-- 291 (394)
T PRK03699 218 ILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTV-LAGLALVLMYLFVN---T-- 291 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHH-HHHHHHHHHHHHHH---c--
Confidence 333445668899999876 9999999999999999999999999999999999987653 43333333322211 1
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
.+..+.... ....+++.+.......+...+.. ++++++..+.......+|..+++.+.+.+.+
T Consensus 292 ----~~~~~~~~~----~~~~G~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~------- 354 (394)
T PRK03699 292 ----DDPSHLLYA----ILGLGFFSSAIYTTIITLGSQQT--KVASPKLVNFILTCGTIGTMLTFVVTSPIVA------- 354 (394)
T ss_pred ----CCchHHHHH----HHHHHHHHHHHHHHHHHHHHHHc--cCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-------
Confidence 122222111 12344444433333444555544 2345566666666666777776665555543
Q ss_pred cchhhHHHHHHHHHHHHHHHHHH
Q 018940 196 ADLENQYRWIAYSSIFIGCCFVG 218 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~l 218 (348)
..|++..+++.+++..+..+
T Consensus 355 ---~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 355 ---HFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred ---HhCchhhhhhhHHHHHHHHH
Confidence 23566665554444444433
No 142
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.03 E-value=1.8e-08 Score=97.19 Aligned_cols=160 Identities=9% Similarity=-0.069 Sum_probs=99.9
Q ss_pred HHHHHHHHHHh----hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccC
Q 018940 43 WFTYLLLFLTD----IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (348)
Q Consensus 43 ~~~~l~~~~~~----~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~ 118 (348)
.....+.|+.+ .+.+..+.|.+.++..+...+++++.|+++||+||||.+. .+....++...+... .
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-~~~~l~~~~~~l~~~--~------ 312 (420)
T PRK09528 242 FDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALL-LAGTIMAVRIIGSGF--A------ 312 (420)
T ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhH-HHHHHHHHHHHHHHh--c------
Confidence 33445556554 2677788999999999999999999999999999998754 455555555433321 1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 018940 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSC-RNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (348)
Q Consensus 119 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~-~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
.+.+...... .+.+.+.+.........+++..+ ++.|+...+. .+....+|..+++.+.+.+.+
T Consensus 313 -~~~~~~~~~~----~l~g~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~--------- 377 (420)
T PRK09528 313 -TGPLEVSILK----LLHAFEVPFLLVGVFKYITLNFD-VRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD--------- 377 (420)
T ss_pred -ccHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcC-ccceeeeeeehHHHHHHHHHHHHHHHHHHHHH---------
Confidence 1223222211 24455555555555566667664 4566655433 344555666665555444432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 018940 198 LENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (348)
Q Consensus 198 ~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~ 227 (348)
..||+..+.+.+++.++..++.++..+++
T Consensus 378 -~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 378 -SIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred -hhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 35788888888777777776666666653
No 143
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.02 E-value=8.7e-09 Score=97.38 Aligned_cols=143 Identities=16% Similarity=0.053 Sum_probs=90.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcC
Q 018940 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (348)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~ 112 (348)
+...........++|.|+++. |.++.+.+.+.....+...+..++.|+++||+||||.++..+............. .
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~ 306 (394)
T TIGR00883 229 IATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA--L 306 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH--H
Confidence 334444455668889998765 9999999999999999999999999999999999987654333332222111110 0
Q ss_pred CCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHH-HHHHHHHHHHHHHHHHHHH
Q 018940 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCR-NAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~-~~~~~ig~~~~~~~~~~~~ 187 (348)
. ...+.. ... +...+.+.+.+....+..++++|..| +++|++..+.. +....+|..+++.+.+.+.
T Consensus 307 ~----~~~~~~-~~~---~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~ 373 (394)
T TIGR00883 307 L----DSGSFT-LFF---FLVLGLALIGGMYTGPMGSFLPELFP-TEVRYTGASLAYNLAGAIFGGFAPYIAAALV 373 (394)
T ss_pred h----cCCchH-HHH---HHHHHHHHHHHHHhhhHHHHHHHhCC-ccceeeEeeehhHhHHHHHhhHHHHHHHHHH
Confidence 0 011222 111 11124556666677778889999885 56788877763 3444556656555554444
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.01 E-value=3.7e-08 Score=93.77 Aligned_cols=148 Identities=13% Similarity=0.078 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 41 ACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 41 ~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
.....++|.|+++.|.++.+.|.+.+...+...+++.+.|+++||+|||+.+ ..+....+++..... +
T Consensus 217 ~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l-~~~~~~~~~~~~~~~----~------- 284 (381)
T PRK03633 217 GSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVL-RVQVFVVILGSIAML----S------- 284 (381)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHH-HHHHHHHHHHHHHHh----h-------
Confidence 3445778888887799999999999999999999999999999999998764 445444444433221 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
... ..... .+.+.+.....+...+++.|..+ +++++...+..+...++|..+++.+.+.+.+ ..
T Consensus 285 ~~~-~~~~~----~l~g~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~----------~~ 348 (381)
T PRK03633 285 QAA-MAPAL----FILGAAGFTLYPVAMAWACEKVE-HHELVAMNQALLLSYTVGSLLGPSFTAMLMQ----------NY 348 (381)
T ss_pred hHH-HHHHH----HHHHHHHHhHHHHHHHHHHccCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------Hh
Confidence 011 11111 13343333444555566666653 4555666666666677777777666655543 34
Q ss_pred HHHHHHHHHHHHHHHH
Q 018940 201 QYRWIAYSSIFIGCCF 216 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~ 216 (348)
++++.+.+.+.+.++.
T Consensus 349 g~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 349 SDNLLFIMIASVSFIY 364 (381)
T ss_pred CccHHHHHHHHHHHHH
Confidence 6777777766666544
No 145
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.00 E-value=2.3e-07 Score=88.94 Aligned_cols=172 Identities=13% Similarity=-0.017 Sum_probs=115.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhh-C----CChhHHHHHHHHHHHHHHhhhhhhHhhhcc-cCCchHHHHHHHHHHHHH
Q 018940 30 GSGHMLNDITAACWFTYLLLFLTDI-G----LSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVS 103 (348)
Q Consensus 30 ~~g~~~~~~~~~~~~~~l~~~~~~~-g----~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr-~Grrr~~i~~~~~~~~i~ 103 (348)
....+--.+.++-+-..+..|++.. + +|.+++..+++.+.-..-....+.|+++|| +|+||.. ..|+++++++
T Consensus 27 f~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI-~lGail~~iG 105 (498)
T COG3104 27 FFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI-VLGAILMAIG 105 (498)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHH
Confidence 3445556666665566666666553 5 999999999999988888999999999999 5999985 5799999999
Q ss_pred HHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc-cchhHHHHHHHHHHHHHHHHHHH
Q 018940 104 FSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST-SRVVLTSCRNAFTMVANLSLYAI 182 (348)
Q Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~R~~~~~~~~~~~~ig~~~~~~~ 182 (348)
-..+.. + +..+.....+... +..+|.+..=.+..+++.+..++.| +|....+..+.+.++|+..++.+
T Consensus 106 h~~L~~---~----~~~~~~gl~i~L~----~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 106 HLVLAI---S----SVSGPGGLYIGLA----LIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHhc---c----ccccccHHHHHHH----HHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 877653 2 1012222323222 3447777777777788888875433 35667778888889998887666
Q ss_pred HHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 018940 183 AFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRT 224 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~ 224 (348)
.+.+. ...||+..|-+.++- ....++.+...
T Consensus 175 ~~~~~----------~~~g~~~gF~~aavG-m~~gl~~f~~~ 205 (498)
T COG3104 175 TGLLA----------INYGWHVGFGLAAVG-MIIGLVIFLLG 205 (498)
T ss_pred HHHHH----------HhhCHHHHHHHHHHH-HHHHHHHHHHc
Confidence 54332 256788877766543 33333333333
No 146
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.00 E-value=5.9e-08 Score=91.51 Aligned_cols=164 Identities=15% Similarity=0.122 Sum_probs=111.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcC
Q 018940 34 MLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (348)
Q Consensus 34 ~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~ 112 (348)
+......+...+|+.++++|. |.|...+++++.++.+...+++.+.|+++|| +.||... ....+.++.+..+.. .
T Consensus 221 ~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~-~~~~l~a~~~l~l~~--~ 296 (394)
T COG2814 221 FLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALI-AALLLLALALLALTF--T 296 (394)
T ss_pred HHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHH-HHHHHHHHHHHHHHH--h
Confidence 333444456679999999998 9999999999999999999999999999999 7777654 454555555543321 1
Q ss_pred CCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 018940 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA 192 (348)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~ 192 (348)
+ .+.+ ...... .+.+...+..........++. .||+++...++.....|+|..++..+++.+++
T Consensus 297 ~------~~~~-~~~~~~---~~wg~a~~~~~~~~~~~~a~~--~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~---- 360 (394)
T COG2814 297 G------ASPA-LALALL---FLWGFAFSPALQGLQTRLARL--APDAADLAGSLNVAAFNLGIALGAALGGLVLD---- 360 (394)
T ss_pred c------chHH-HHHHHH---HHHHHHhhhhhhHHHHHhccc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 2 1222 211111 134444444444444444442 35788999999999999999999888888774
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 018940 193 KTHADLENQYRWIAYSSIFIGCCFVGIFLSR 223 (348)
Q Consensus 193 ~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~ 223 (348)
..|+....++.+++.++..++....
T Consensus 361 ------~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 361 ------ALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred ------hhchHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777777777766666555443
No 147
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.99 E-value=4.4e-08 Score=93.68 Aligned_cols=162 Identities=12% Similarity=0.038 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHhh-CC-Ch--hHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 40 AACWFTYLLLFLTDI-GL-SP--RGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 40 ~~~~~~~l~~~~~~~-g~-s~--~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
.....++++.|..+. +. +. ...|.+..+..+...+..++.|+++||+||||.+. .+.....+....... .
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~---~-- 308 (408)
T PRK09874 235 TGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILI-TALIFSVLLLIPMSF---V-- 308 (408)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHH-HHHHHHHHHHHHHHH---h--
Confidence 334456777787775 32 21 23566777778888899999999999999988754 454444444332211 0
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
.+.....+ ...+.+++.+...+...+.+.+.. ++++|++..+..+....+|..+++.+.+.+.
T Consensus 309 ----~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~-------- 371 (408)
T PRK09874 309 ----QTPLQLGI----LRFLLGAADGALLPAVQTLLVYNS-SNQIAGRIFSYNQSFRDIGNVTGPLMGAAIS-------- 371 (408)
T ss_pred ----ccHHHHHH----HHHHHHhhhHhhHHHHHHHHHHhC-CcccceeeehHHHHHHHHHHHhhHHHHHHHH--------
Confidence 12221111 112456666666666666666655 4567888888888888888877766655443
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018940 196 ADLENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e 226 (348)
+..||++.+++.+++.++..++.++..++
T Consensus 372 --~~~g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 372 --ANYGFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred --hhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23578889988888777777666555444
No 148
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.98 E-value=1.1e-08 Score=99.03 Aligned_cols=168 Identities=15% Similarity=-0.019 Sum_probs=104.3
Q ss_pred HHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc--c
Q 018940 44 FTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS--T 121 (348)
Q Consensus 44 ~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~--~ 121 (348)
..+.+.++++.|.+..+.+....+..+...++.++.|+++||+|||+.+. .+....+++...+.....+. .... .
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 380 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLL-IGAAGMAICLFVLGILGASF--VTGSSKS 380 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHHHHHHHHhhcc--cCCcccc
Confidence 45566666667999888899999999999999999999999999998764 45555555543332000010 0000 0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH-HhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 122 LKVETISYCVFAAIFNVGWAATQ-VAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
.....+... .++..+++... ....++..|..+ +++|++..+..+...++|+.+++.+.+.+.. ..
T Consensus 381 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~----------~~ 446 (481)
T TIGR00879 381 SGNVAIVFI---LLFIAFFAMGWGPVPWVIVSEIFP-LSLRPKGISIAVAANWLANFIVGFLFPTMLE----------SI 446 (481)
T ss_pred hhHHHHHHH---HHHHHHHHccccCeehhhhhccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hc
Confidence 011111111 12222333222 223455577764 5789999999888888888877665544432 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 201 QYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
+|++.+.+.++++++..++..+..||++
T Consensus 447 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 447 GVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred CccceehhHHHHHHHHHHHHheecccCC
Confidence 6777777777777777777766677743
No 149
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.97 E-value=1.2e-08 Score=99.85 Aligned_cols=167 Identities=12% Similarity=0.018 Sum_probs=105.0
Q ss_pred HHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchh
Q 018940 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKV 124 (348)
Q Consensus 45 ~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 124 (348)
.+.|.++++.|.+....+.......+...++.++.|+++||+|||+.+ +.+.+..+++...+.. .. ........
T Consensus 292 ~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~-i~~~~~~~v~~~~l~~--~~---~~~~~~~~ 365 (479)
T PRK10077 292 YYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ-IIGALGMAIGMFSLGT--AF---YTQAPGIV 365 (479)
T ss_pred HHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH-HHhHHHHHHHHHHHHH--HH---hcCcccHH
Confidence 344555566688877777777778888899999999999999998875 4566666666543321 01 00111111
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH--hccCCcccchhhH
Q 018940 125 ETISYCVFAAIFNVGWAAT-QVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS--VSTAKTHADLENQ 201 (348)
Q Consensus 125 ~~~~~~l~~~~~~~~~~~~-~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~--~~~~~~~~~~~~g 201 (348)
. . ..+ .+++.+++.. .+...++++|..+ +++|++..++.+....+|..+++.+.+.+.. .+. +..+
T Consensus 366 ~-~-~~~--~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~------~~~~ 434 (479)
T PRK10077 366 A-L-LSM--LFYVAAFAMSWGPVCWVLLSEIFP-NAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLV------AHFH 434 (479)
T ss_pred H-H-HHH--HHHHHHHhccccchhHHHhHhhCC-hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchh------hhcc
Confidence 1 1 111 1233333322 2335678888874 5789999999988888888887766533321 111 2456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 202 YRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 202 ~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
|++.+++.+++.++..++.++..||++
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 435 NGFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred CccHHHHHHHHHHHHHHHHHhccccCC
Confidence 777777777777777777766777753
No 150
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.95 E-value=1.1e-08 Score=99.83 Aligned_cols=162 Identities=12% Similarity=0.050 Sum_probs=101.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhccc--CCchHHHHH-HHHHHHHHHHHHhc
Q 018940 33 HMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRF--GHFKIWHGA-GSVLVAVSFSSVFG 109 (348)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~--Grrr~~i~~-~~~~~~i~~~~l~~ 109 (348)
.+...........+++.|.++.|.+..+.|.+.++..+...+.+|+.|+++||. ++||...+. +.....+......
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~- 328 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA- 328 (455)
T ss_pred HHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH-
Confidence 333333444456788899888899999999999999999999999999999983 333333221 2222222221111
Q ss_pred CcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018940 110 GCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (348)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~ 189 (348)
. ..+.....+ ...+.+++++....+..+++.+..+ +++|++..++.+....+|+.+++.+.+.+.+.
T Consensus 329 --~------~~~~~~~~i----~~~~~G~~~g~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 395 (455)
T TIGR00892 329 --L------AGDYTGLVI----YCIFFGLSFGSVGALLFEVLMDLVG-AQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA 395 (455)
T ss_pred --H------hchHHHHHH----HHHHHHHHhchHHHHHHHHHHHHhh-HHHHhhHHhHHHHHHHHHHHccccceeeeehh
Confidence 0 112222211 1235667777777777788888774 57889999998888888888766554443321
Q ss_pred ccCCcccchhhHHHHHHHHHHHHHHHHH
Q 018940 190 STAKTHADLENQYRWIAYSSIFIGCCFV 217 (348)
Q Consensus 190 ~~~~~~~~~~~g~~~~~~i~~~i~~~~~ 217 (348)
..+|++.+++.+++.++..
T Consensus 396 ---------~g~~~~~f~~~~~~~li~~ 414 (455)
T TIGR00892 396 ---------TKNYKYIFYASGSIVVSAG 414 (455)
T ss_pred ---------cCCcchHHHHhhHHHHHHH
Confidence 1247777766655544443
No 151
>PRK15075 citrate-proton symporter; Provisional
Probab=98.90 E-value=1.6e-07 Score=91.13 Aligned_cols=137 Identities=12% Similarity=0.019 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccC
Q 018940 40 AACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (348)
Q Consensus 40 ~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~ 118 (348)
......++|.|+++. |.+..+.+++..+..+...++.++.|+++||+||||.++................ .+ .
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~--~~----~ 327 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSW--LV----A 327 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH--HH----c
Confidence 345567889999886 9999999999989999999999999999999999988654322221112111110 01 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHH-HHHHHHHHHHHHHHHHH
Q 018940 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNA-FTMVANLSLYAIAFIVF 187 (348)
Q Consensus 119 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~-~~~ig~~~~~~~~~~~~ 187 (348)
..+........ .+.+++++.......++..|..| +++|+...++.+. +..+++.+++.+.+.+.
T Consensus 328 ~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~e~~p-~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~ 392 (434)
T PRK15075 328 APSFARMLAVE----LWLSFLYGSYNGAMVVALTEVMP-AEVRTAGFSLAYSLATAIFGGFTPAISTWLI 392 (434)
T ss_pred CCchHHHHHHH----HHHHHHHHHHHhhHHHHHHHHCC-CCccchheeHHHHHHHHHHhhhHHHHHHHHH
Confidence 11111111111 12334455544445567788875 5689888776433 32233444444433333
No 152
>PRK09952 shikimate transporter; Provisional
Probab=98.89 E-value=3.2e-07 Score=89.23 Aligned_cols=170 Identities=12% Similarity=0.012 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 37 DITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
........++.+.|.++. |.+......+.....+...++.++.|+++||+||||.++ .+.+..++.....+. ...
T Consensus 263 ~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~-~~~~~~~~~~~~~~~-~~~-- 338 (438)
T PRK09952 263 LLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYI-TGALIGTLSAFPFFM-ALE-- 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH-HHHHHHHHHHHHHHH-HHH--
Confidence 334445567888888775 998887666666677788889999999999999998754 454444433322211 000
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHH-HHHHHHHHHHHHHHHHHHhccCCc
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNA-FTMVANLSLYAIAFIVFSVSTAKT 194 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~-~~~ig~~~~~~~~~~~~~~~~~~~ 194 (348)
..+..+..+. ...+.+++.+.......++.+|..+ ++.|+...++.+. +..+|+.+++.+.+.+++..
T Consensus 339 ---~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~e~~p-~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~---- 407 (438)
T PRK09952 339 ---AQSIFWIVFF---SIMLANIAHDMVVCVQQPMFTEMFG-ASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF---- 407 (438)
T ss_pred ---cCChHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCC-cchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 1111111111 1123445555556667788899885 4678777776543 33356556555554444321
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018940 195 HADLENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (348)
Q Consensus 195 ~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e 226 (348)
..+|+..+...++..++..+.. +.++|
T Consensus 408 ----~~~~~~~~~~~~~~~~i~~v~~-~~~~~ 434 (438)
T PRK09952 408 ----GGSWHSVAIYLLAGCLISAMTA-LLMKD 434 (438)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHH-HHccc
Confidence 1236666665555554444333 44565
No 153
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.88 E-value=7.3e-08 Score=94.88 Aligned_cols=132 Identities=11% Similarity=0.026 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 43 WFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 43 ~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
...++|.|+++. |.++.+.|.+.+...+...++.++.|+++||+||||.++ .+.....+....+.. .+ ..+
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~--~~-----~~~ 365 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYV-CSLLISQLLIIPVFA--IG-----GAN 365 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHHHHHHHHhh--cc-----ccH
Confidence 346788999754 999999999999999999999999999999999998765 344443333322221 11 111
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
.. ...... .+.+...........+++.+..+ +++|++..++.+....+|+.+++.+.+.+.
T Consensus 366 ~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~ 426 (496)
T PRK03893 366 VW-VLGLLL---FFQQMLGQGISGLLPKLIGGYFD-TEQRAAGLGFTYNVGALGGALAPILGALIA 426 (496)
T ss_pred HH-HHHHHH---HHHHHHhcccchhhHHHHHhhCC-HHHhhcccchhhhhhhHHHHHHHHHHHHHh
Confidence 11 111111 11221111222334456777764 578999999888888888777666554443
No 154
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.87 E-value=1.8e-07 Score=88.10 Aligned_cols=137 Identities=12% Similarity=0.094 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCccc
Q 018940 38 ITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (348)
Q Consensus 38 ~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~ 117 (348)
........++|.|+++.|.|+.+.|.+.++..+..+++.++.|+++||+|+||..+..+....+++...+.. .+
T Consensus 211 ~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~---- 284 (355)
T TIGR00896 211 GLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF--AP---- 284 (355)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH--hh----
Confidence 334455678899998889999999999999999999999999999999965555455555555555443321 12
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
... . . . +. .+.+++.+.......+.+.+..+++++++...++.+....++..+++.+.+.+.+
T Consensus 285 -~~~-~-~-~-~~---~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 285 -MHG-L-W-A-WA---LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHD 347 (355)
T ss_pred -hhH-H-H-H-HH---HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1 1 1 11 2566666665554445554444445566777777776666666666555555543
No 155
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.86 E-value=1.3e-07 Score=90.05 Aligned_cols=158 Identities=12% Similarity=0.158 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
....|+++|+++. |.|+.+.+.+.+...+...++.++.|+++||+|+||... .+....+++...+.. .+ .
T Consensus 217 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~-~~~~~~~i~~~~~~~--~~------~ 287 (382)
T PRK10091 217 AWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAA-VTDFIIVLALLMLFF--FG------G 287 (382)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHH-HHHHHHHHHHHHHHH--HH------h
Confidence 3356778888775 999999999999999999999999999999999987754 455555555433221 01 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
+.....+. . .+.+.+......+......+..+++++++.. ..+....+|..+++.+.+.+.+. ..
T Consensus 288 ~~~~~~~~-~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~---------~~ 352 (382)
T PRK10091 288 MKTASLIF-A---FICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL---------GL 352 (382)
T ss_pred hHHHHHHH-H---HHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc---------cc
Confidence 11111111 1 1333443333333332222222233334433 22445566777766665555432 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 018940 201 QYRWIAYSSIFIGCCFVGIFLSR 223 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~~ll~~~~ 223 (348)
+|++.+.+.+++..+.......+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 353 AYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred CcchHHHHHHHHHHHHHHHHHHH
Confidence 56666666555544444333333
No 156
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.86 E-value=2.3e-06 Score=84.52 Aligned_cols=161 Identities=14% Similarity=0.083 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHhh-CCChhHHHHHH-HHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCccc
Q 018940 40 AACWFTYLLLFLTDI-GLSPRGAAAVM-LSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL 117 (348)
Q Consensus 40 ~~~~~~~l~~~~~~~-g~s~~~~g~i~-~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~ 117 (348)
......+.++|+.+. |.|+.+.|.+. ....+...++.++.|+++||+||||..++ +.+..++....... .. ..
T Consensus 238 ~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i-~~~l~~l~~l~~~~--l~--~~ 312 (491)
T PRK11010 238 DAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMI-FGILQGVSNAGYWL--LS--IT 312 (491)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHH--HH--hc
Confidence 334456677887665 99999999997 46678999999999999999999887543 33333332211110 01 00
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 018940 118 STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (348)
Q Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
..+........ .+.++..+....+..+...++.+ ++.++...++.+....+|..+++.+.+.+.+
T Consensus 313 -~~~~~~l~~~~----~l~~~~~g~~~~~~~a~~~~l~~-~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~--------- 377 (491)
T PRK11010 313 -DKNLYSMGAAV----FFENLCGGMGTAAFVALLMTLCN-KSFSATQFALLSALSAVGRVYVGPVAGWFVE--------- 377 (491)
T ss_pred -cccHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 11211111111 12222333333445566667764 4566777777777777776665544444442
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Q 018940 198 LENQYRWIAYSSIFIGCCFVGIFL 221 (348)
Q Consensus 198 ~~~g~~~~~~i~~~i~~~~~ll~~ 221 (348)
..||+..+.+.+++++...++..
T Consensus 378 -~~G~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 378 -AHGWPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred -HhChHHHHHHHHHHHHHHHHHHH
Confidence 34788777776666665544443
No 157
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.86 E-value=3e-07 Score=94.37 Aligned_cols=140 Identities=16% Similarity=-0.017 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHH
Q 018940 62 AAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWA 141 (348)
Q Consensus 62 g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 141 (348)
.....+..+...+++++.|+++||+|||+.+ ..+.++.+++..++.. .+ +.....+.. .+.+++.+
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l-~~~~~lsai~~ll~~~--~~-------s~~~ll~~~----~l~g~~~~ 663 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRML-AGSMVLSCISCFFLSF--GN-------SESAMIALL----CLFGGLSI 663 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHHHHH--Hc-------cHHHHHHHH----HHHHHHHH
Confidence 4456677788899999999999999999875 4566666665543221 11 112121111 23444444
Q ss_pred HHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHH
Q 018940 142 ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFL 221 (348)
Q Consensus 142 ~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~ 221 (348)
.......++++|+.| .++|+++.++.+....+|+++++.+.+.+.. .+...++++++++.++.+++..
T Consensus 664 ~~~~~~~a~~aEl~P-t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~-----------~~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 664 AAWNALDVLTVELYP-SDKRATAFGFLNALCKAAAVLGILIFGSFVG-----------ITKAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hhhHHHHHHHHHHHHHHHHHHH
Confidence 455556788899885 5789999999999999999988776555432 2334566667666666555544
Q ss_pred hhccccc
Q 018940 222 SRTEEPR 228 (348)
Q Consensus 222 ~~~~e~~ 228 (348)
+.||.+
T Consensus 732 -~LPET~ 737 (742)
T TIGR01299 732 -KLPDTR 737 (742)
T ss_pred -hCCCCc
Confidence 558754
No 158
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.85 E-value=1.5e-07 Score=92.13 Aligned_cols=140 Identities=15% Similarity=0.086 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 37 DITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
.........++|.|+++. |.++.+.|.+.....+...++.++.|++.||+|||+.+ ..+....+++...+... .
T Consensus 268 ~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~-~~g~~~~~~~~~~~~~~-~--- 342 (485)
T TIGR00711 268 GLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV-TIGLILYAVGFYWRAFT-F--- 342 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH-HHHHHHHHHHHHHHhcc-C---
Confidence 333344456788899887 99999999999999999999999999999999998774 45666666665443310 1
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
.+..+....... ..+.+++.+....+......+.. ++++|+.+.+..+....+|+.++..+.+.+.
T Consensus 343 -~~~~~~~~~~~~----~~l~g~g~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 343 -TPDTPFLAIALP----QFIRGFGMGCFFMPLTTIALSGL-PPHKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred -CCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcC-CHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222222111 13566777666666666665555 4678999999998888888888776655554
No 159
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.84 E-value=4.1e-07 Score=88.22 Aligned_cols=126 Identities=13% Similarity=0.079 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 37 DITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
.........++|.|+++. |.+..+.+....+..+...+.+++.|+++||+||||..+. +.+..++.....+. ..+
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~-~~~~~~~~~~~~~~-~~~-- 331 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLC-FGSLAALFTVPILS-ALQ-- 331 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH-HHHHHHHHHHHHHH-HHH--
Confidence 333445568899999875 9999999999998888899999999999999999987654 33332222211110 001
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHH
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTM 173 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ 173 (348)
...+.... .... .+.....+.......++.+|..| +|.|+...++.+...+
T Consensus 332 --~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~e~fp-~~~r~t~~g~~~~~g~ 382 (432)
T PRK10406 332 --NVSSPYAA-FGLV---MCALLIVSFYTSISGILKAEMFP-AQVRALGVGLSYAVAN 382 (432)
T ss_pred --cCCcHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHCC-CCccchhhhHHHHHHH
Confidence 01111111 1111 11112222333345567888885 5789999998775433
No 160
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.84 E-value=1.1e-07 Score=92.28 Aligned_cols=242 Identities=13% Similarity=0.025 Sum_probs=139.1
Q ss_pred HHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHh
Q 018940 67 SGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVA 146 (348)
Q Consensus 67 ~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 146 (348)
...+...+.+|..|.++||||||.++. .......+..+.+.. .+ +|.++. .-...++.+....
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~-~~~~~~~l~~~~~~~----------~~-~~~~~~-----~~l~g~~~~~~s~ 132 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLL-LPLFGTILPALCLLF----------QG-YWFFLL-----LGLSGGFSAIFSV 132 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHH-HHHHHHHHhHHHHHH----------HH-HHHhhh-----cccccchhhhhhh
Confidence 447888899999999999999988754 333333333221110 01 111110 0122334455555
Q ss_pred HhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018940 147 HMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (348)
Q Consensus 147 ~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e 226 (348)
..+.+++++. +++|....+..+.-...+..+++.+++-.. ...|.-..+.+.++..++..+...+.+||
T Consensus 133 ~~a~vadis~-~~~R~~~~gll~~~~~~~~~~~p~~~~~~~----------~~~~~a~~f~ia~~~~~~~~~y~~~~l~E 201 (463)
T KOG2816|consen 133 GFAYVADISS-EEERSSSIGLLSGTFGAGLVIGPALGGYLV----------KFLGIALVFLIAAASGILSLLYMLLFLPE 201 (463)
T ss_pred hhhheeeccc-hhHHHHHHHHHHHHHHHHHhHHHHHHHHHH----------HhcCchHHHHHHHHHHHHHHHHHhhcccc
Confidence 6678888875 567887777666544444444333322222 23456666777777888888888888999
Q ss_pred cccccccc----------C--CchhHHHHHHHHH---hHHHHHHHHHHHHHHHHHH-hhhHHHHHHHhhcccccchhhhH
Q 018940 227 PRLKMGLR----------G--NSHARISWAYWFK---KILYYQVALVYMLTRLVVN-VSQAYLAFYVINDLRMGQSAKAL 290 (348)
Q Consensus 227 ~~~~~~~~----------~--~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~-~~~~~~~~yl~~~~~~~~~~~~~ 290 (348)
+..+++++ + .....+.++...+ +|..+.+.+..++....-. ...-..+.|+....+++.++.+.
T Consensus 202 sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~ 281 (463)
T KOG2816|consen 202 SLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSD 281 (463)
T ss_pred ccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHH
Confidence 64432221 0 0111222222222 2333333333333322222 22214466777778898877775
Q ss_pred HhHHHHHHHHHHHHHHH-HH-HHhhhhhhHHHHHHHHHHHHHHHhHhhcc
Q 018940 291 VPAIIYICSFIVSILLQ-EM-AWTGQRLKAYYSAGGVLWVFCGAGILILP 338 (348)
Q Consensus 291 ~~~~~~~~~i~g~~~~~-~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~ 338 (348)
+....+....++.++.. .+ +.+|.| +.+..|+....+...+..|+.
T Consensus 282 ~~~~~~~~~~i~~l~~~~~l~~~l~~~--~~i~lGl~~~~~~~~~~af~~ 329 (463)
T KOG2816|consen 282 LLSLVSILGIISQLLLLPLLSSILGEK--RLISLGLLSEFLQLLLFAFAT 329 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh--hHhhHHHHHHHHHHHHHHHhc
Confidence 55555566667665554 56 788988 799999998888888877774
No 161
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.84 E-value=4.1e-07 Score=87.30 Aligned_cols=133 Identities=10% Similarity=0.016 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
....+.|.|+.+. |.++.+.|.......+...++.++.|+++||+||||.. ..+.+..+++...+.. .+. ....
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~-~~~~~~~~~g~~~~~~--~~~--~~~~ 307 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLI-RMGLWPMVAGLLLAAL--ATV--ISSH 307 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHH--HHH--cccc
Confidence 3345567777775 99999999988878888889999999999999998875 4565555555433221 010 0011
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~ 185 (348)
+..+.. +...+.+.+.+....+..+.... . ++++|++..+..+....++..+++.+.+.
T Consensus 308 ~~~~~~----~~~~~~g~g~~~~~~~~~~~~~~-~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~ 366 (406)
T PRK15402 308 AYLWLT----AGLSLYAFGIGLANAGLYRLTLF-S-SDVSKGTVSAAMGMLSMLIFTVGIELSKH 366 (406)
T ss_pred cHHHHH----HHHHHHHHHHHHHhhhHHHHHhh-h-ccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222211 11124555655544444443322 2 34789999998888877777665544433
No 162
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.84 E-value=1.7e-07 Score=83.61 Aligned_cols=127 Identities=13% Similarity=0.163 Sum_probs=93.0
Q ss_pred HHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccc
Q 018940 44 FTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (348)
Q Consensus 44 ~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 122 (348)
.+.-+.++++- |+|+..+|.+.+.-....++.+|++|.++||.||+-.|+..+++....+=..+++ . .-+++
T Consensus 284 i~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F---t----~lsPy 356 (459)
T KOG4686|consen 284 ITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF---T----FLSPY 356 (459)
T ss_pred hhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh---h----hccHH
Confidence 34456788875 9999999999999999999999999999999999877776655555554333332 1 01122
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (348)
Q Consensus 123 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~ 186 (348)
. . . .+.|+.++....+.+.+++.+.| +++-+.+.++.+..+++|-.+.+++.+.+
T Consensus 357 ~-~---m----~~lGLsysllAcslWP~va~~vp-E~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 357 T-S---M----TFLGLSYSLLACSLWPCVASLVP-EEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred H-H---H----HHHhhhHHHHHHHHhhhhhhhCC-HHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 1 1 1 25677777777777888888774 67789999999999999988766655443
No 163
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.82 E-value=4.4e-07 Score=86.60 Aligned_cols=165 Identities=15% Similarity=0.040 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHH-HHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCC
Q 018940 35 LNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQI-ADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMP 113 (348)
Q Consensus 35 ~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i-~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~ 113 (348)
..........++.++|++|.|.|+.++|.+..+... ...++..+.|++.||+|+||... .+....++.....+. ..
T Consensus 219 l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~-~~~~~~~~~~~~~~~--~~ 295 (390)
T TIGR02718 219 LSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFI-LGVGLAGSLALLWFA--QA 295 (390)
T ss_pred HHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHHHHH--HH
Confidence 334444455678889998889999999999888775 44556889999999999988754 344333222211110 00
Q ss_pred CcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 018940 114 CRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK 193 (348)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~ 193 (348)
.. ....+.. . .+.. ..+.++..+....+..+...+..+++++|++..+..+...++|..+++.+.+.+.+
T Consensus 296 ~~-~~~~~~~-~--~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~----- 365 (390)
T TIGR02718 296 AF-WLAPGIA-V--AWSC-SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD----- 365 (390)
T ss_pred Hc-ccCCcHH-H--HHHH-HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 00 0001111 1 1111 01223344555455555555555444678898898888888888887777666553
Q ss_pred cccchhhHHHHHHHHHHHHHHHHH
Q 018940 194 THADLENQYRWIAYSSIFIGCCFV 217 (348)
Q Consensus 194 ~~~~~~~g~~~~~~i~~~i~~~~~ 217 (348)
..|++..+.+.+++.++..
T Consensus 366 -----~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 366 -----RFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred -----HHccHHHHHHHHHHHHHHH
Confidence 3466667766655555443
No 164
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.82 E-value=1.6e-07 Score=90.77 Aligned_cols=144 Identities=12% Similarity=0.132 Sum_probs=92.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCc
Q 018940 33 HMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (348)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~ 111 (348)
.+...........+.+.|.++. + ++.+.+.+..+..+...++.+++|+++||+||||.+. .+....+++......
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~-~~~~~~~~~~~~~~~-- 306 (437)
T TIGR00792 231 YLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFA-GGILLMVLGYLIFFF-- 306 (437)
T ss_pred HHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-HHHHHHHHHHHHHHH--
Confidence 3333333333333444444444 5 5667788888889999999999999999999998764 566565555543321
Q ss_pred CCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhccc------CcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018940 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITL------NSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (348)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~------~~~~R~~~~~~~~~~~~ig~~~~~~~~~~ 185 (348)
.+ .+.... .+...+.+++.+.......++++|..+ ++++++...+..+....+|..+++.+.+.
T Consensus 307 ~~------~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 307 AG------SNLPLI----LVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred cc------hhHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 122211 111235566777667777778877653 13345788888888889999888888777
Q ss_pred HHHhc
Q 018940 186 VFSVS 190 (348)
Q Consensus 186 ~~~~~ 190 (348)
+++..
T Consensus 377 ll~~~ 381 (437)
T TIGR00792 377 ILGII 381 (437)
T ss_pred HHHHc
Confidence 77654
No 165
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.82 E-value=1.3e-07 Score=88.70 Aligned_cols=168 Identities=12% Similarity=0.039 Sum_probs=103.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc-c-CCchHHHHHHHHHHHHHHHH
Q 018940 30 GSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-F-GHFKIWHGAGSVLVAVSFSS 106 (348)
Q Consensus 30 ~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr-~-Grrr~~i~~~~~~~~i~~~~ 106 (348)
++.++..-+.-+.+.-+.|.|++|. |.|..++++..+.+-+....+..++|++||| + |||.|.-+...+...++...
T Consensus 258 a~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~ 337 (448)
T COG2271 258 ALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVL 337 (448)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 3445555555566678899999998 9999999999999999999999999999998 3 89999877666666666654
Q ss_pred HhcCcCCCcccCcccchhHHHHHHHHHHHHH-HHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHH-HHHHHHHHHH
Q 018940 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFN-VGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMV-ANLSLYAIAF 184 (348)
Q Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~i-g~~~~~~~~~ 184 (348)
.+. .| ..+.....+.. ...| .-|+-... ......|..| ++--+.+.++...+..+ |...++
T Consensus 338 ~w~--~~-----~~~~~l~~~~l----~~iGf~IyGPqmL-iGl~a~e~~p-K~AaGtA~Gf~Glf~Yl~Ga~~a~---- 400 (448)
T COG2271 338 YWL--AP-----NGSYLLDAILL----FIIGFLIYGPQML-IGLAAAEFVP-KKAAGTATGFVGLFAYLIGAALAG---- 400 (448)
T ss_pred HHc--CC-----CccHHHHHHHH----HHHHHHHhhHHHH-HHHHHhcccc-HhhccchhchhhhHHHHhhHHhcC----
Confidence 443 23 22222221111 1222 12232211 2233445553 44457788888777776 444332
Q ss_pred HHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHH
Q 018940 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIF 220 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~ 220 (348)
..++... | ..||...|++..+.++++.++.
T Consensus 401 ~~~g~i~-----d-~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 401 LPLGYIA-----D-TWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred CcceeeE-----e-cCCCcchHHHHHHHHHHHHHHH
Confidence 2223222 2 3688887776655444444443
No 166
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.80 E-value=7.1e-07 Score=85.06 Aligned_cols=146 Identities=11% Similarity=0.105 Sum_probs=101.0
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~ 106 (348)
..+....+..........++.++|++|.|.|+.++|.+..+..+...+..++.|++.||+|+|+.+ ..+.+...+....
T Consensus 208 ~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l-~~~~~~~~~~~~~ 286 (382)
T TIGR00902 208 LRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLL-LISAIACVGRWAI 286 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHH-HHHHHHHHHHHHH
Confidence 444455555566666777899999988899999999999999999999999999999999998764 4666666666543
Q ss_pred HhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHH-HHHHHHHHHHHHHHHH
Q 018940 107 VFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRN-AFTMVANLSLYAIAFI 185 (348)
Q Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~-~~~~ig~~~~~~~~~~ 185 (348)
... + .+.+.... ...+.++.++...++...++.+. ++++|++..+..+ ....+|..+++.+++.
T Consensus 287 ~~~---~------~~~~~~~~----~q~l~g~~~~~~~~~~~~~i~~~--~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~ 351 (382)
T TIGR00902 287 IGA---I------EAFPLIFL----LQILHCGTFAVCHLAAMRYIAAQ--PGSEIAKLQALYNALAMGGLIAIFTAFAGF 351 (382)
T ss_pred HHh---H------hhHHHHHH----HHHHHHHHHHHHHHHHHHHHHhC--CHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 1 12221211 12356677777777777777764 3567788788765 3455677777766666
Q ss_pred HHH
Q 018940 186 VFS 188 (348)
Q Consensus 186 ~~~ 188 (348)
+.+
T Consensus 352 l~~ 354 (382)
T TIGR00902 352 IYP 354 (382)
T ss_pred HHH
Confidence 654
No 167
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.79 E-value=3.4e-07 Score=88.98 Aligned_cols=168 Identities=9% Similarity=-0.028 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH--HHHhcCcCCC
Q 018940 38 ITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF--SSVFGGCMPC 114 (348)
Q Consensus 38 ~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~--~~l~~~~~~~ 114 (348)
........++|.|+++. |.|+.+.|+...+..+...++.++.|+++||+|++|... .+.....+.. ...+. ..+
T Consensus 265 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~- 341 (438)
T TIGR00712 265 LLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGA-TGVFFMTLVTIAVIVYW-MNP- 341 (438)
T ss_pred HHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccH-HHHHHHHHHHHHHHHHH-hcC-
Confidence 33345567899999987 999999999999999999999999999999997543222 2222221111 11111 011
Q ss_pred cccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHH-HHHHHHHHHHHHhccCC
Q 018940 115 RILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN-LSLYAIAFIVFSVSTAK 193 (348)
Q Consensus 115 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~-~~~~~~~~~~~~~~~~~ 193 (348)
..+.... ...+ ...+.+.............+..+ +++|+...++.+.....|+ .+++.+.+.+.+
T Consensus 342 ----~~~~~~~--~~~~--~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~----- 407 (438)
T TIGR00712 342 ----AGNPLVD--MICM--IVIGFLIYGPVMLIGLHALELAP-KKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD----- 407 (438)
T ss_pred ----CCchHHH--HHHH--HHHHHHHccHHHHHHHHHHHhcC-hhheeeehhhhchHHHhhhhhhcchhHHHHHH-----
Confidence 1121211 1111 12222211111111234556664 5789999888876666654 445555444442
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 018940 194 THADLENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (348)
Q Consensus 194 ~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~ 227 (348)
..||.+.+++.+.+.++..+...+..||+
T Consensus 408 -----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 408 -----FFGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred -----hccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34677777777666666677777777773
No 168
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.79 E-value=4.7e-07 Score=84.64 Aligned_cols=130 Identities=10% Similarity=0.052 Sum_probs=93.7
Q ss_pred HHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccch
Q 018940 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (348)
Q Consensus 45 ~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 123 (348)
.+.|.|.++. |.++.+.|.+.....+...++.++.|++.||+|||+... .+....++....+.. .+ . +.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~-----~-~~~ 302 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMT-GAIFVIGLAILVVGL--TP-----P-NFP 302 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHH-HHHHHHHHHHHHHHh--hc-----h-hHH
Confidence 6677787775 999999999999999999999999999999999987654 444444444433221 11 1 122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
.. .+...+.+++.+...+...+++.+..+ +|+|++..+..+....++..+++.+.+.+.+
T Consensus 303 ~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 303 LF----LVLWFAIGVGYGPINVPQGTLLQRRVP-AELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HH----HHHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 112235667777777777888888874 6789999999999988888887776665553
No 169
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.79 E-value=3.7e-07 Score=88.04 Aligned_cols=130 Identities=15% Similarity=0.120 Sum_probs=82.7
Q ss_pred HHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccc
Q 018940 43 WFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (348)
Q Consensus 43 ~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 122 (348)
+..++|.|+++.|.++.+.+.+.++..+...+++++.|+++||+||||.+. .+.+..++....+.. .+ ....
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~~~~--~~-----~~~~ 321 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFS-IGLLMSFLFIFPLFR--IP-----QDNY 321 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHHHHHHHHHHHH--Hc-----cccH
Confidence 456788888888999999999999999999999999999999999988754 454444444332221 11 1111
Q ss_pred hhHHHHHHHHHHHHHHHHH--HHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 123 KVETISYCVFAAIFNVGWA--ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 123 ~~~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
. . .... +++.+.. .........+.|..+ +++|++..++.+....+|+.+++.+.+.+.
T Consensus 322 ~-~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~ 381 (426)
T PRK12307 322 L-L-LGAC----LFGLMATNVGVGGLVPKFLYDYFP-LEVRGLGTGLIYNLAATSGTFNSMAATWLG 381 (426)
T ss_pred H-H-HHHH----HHHHHHhcccHhHHHHHHHHHhCc-HHHHhhhhhHHHHHHhHHHHHHHHHHHHHH
Confidence 1 1 1111 1222111 111223355677774 578999999887777777777666554443
No 170
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.78 E-value=3.3e-07 Score=90.56 Aligned_cols=134 Identities=19% Similarity=0.156 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
....++|.|+++. |.|+.+.|..+....+...++.++.|+++||+|||+. +..+....+++...+.. .. ...
T Consensus 277 ~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-~~~g~~~~~~~~~~l~~--~~----~~~ 349 (495)
T PRK14995 277 GFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLV-ATGGMALSALSFYGLAM--TD----FST 349 (495)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH-HHHHHHHHHHHHHHHHH--hc----CCC
Confidence 3446778899987 9999999999999999999999999999999999765 45666666665543321 11 112
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
+.... ... ..+.+++.+....+....+.+.. ++++++..++..+...++|+.++..+.+.+.
T Consensus 350 ~~~~~-~~~---~~l~G~g~g~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 350 QQWQA-WGL---MALLGFSAASALLASTSAIMAAA-PPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred chHHH-HHH---HHHHHHhHHHHHHHHHHHHHhcC-CHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22212 111 23567777777776766666655 4678899999888888888887666554443
No 171
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.78 E-value=2.9e-07 Score=90.48 Aligned_cols=157 Identities=17% Similarity=0.011 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCc-----hHHHHHHH-HHHHHHHHHHhcCcCCC
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHF-----KIWHGAGS-VLVAVSFSSVFGGCMPC 114 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grr-----r~~i~~~~-~~~~i~~~~l~~~~~~~ 114 (348)
....++|.|+.+. |.+..+.+.+.++..+...++.++.|+++||+||| |.++.... .+..+... .+ +.
T Consensus 270 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~-~~----~~ 344 (476)
T PLN00028 270 TMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCI-WL----GR 344 (476)
T ss_pred HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHH-Hh----cc
Confidence 3456778888776 99999999999999999999999999999999865 22222221 11111111 11 10
Q ss_pred cccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 018940 115 RILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT 194 (348)
Q Consensus 115 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~ 194 (348)
..+.... .... .+++.+.........++.+++. +++|+...++.+.+..+|+.+++. +.+. .
T Consensus 345 ----~~~~~~~-~~~~---~l~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~g~lg~~i~~~----l~~~-~--- 406 (476)
T PLN00028 345 ----ANSLGAA-IVVM---ILFSIFVQAACGATFGIVPFVS--RRSLGVISGLTGAGGNVGAVLTQL----LFFT-G--- 406 (476)
T ss_pred ----cchHHHH-HHHH---HHHHHHHHHhhhhhcccCcccC--hhhchhhhhhhhccccHHHHHHHH----HHHh-c---
Confidence 1122211 1111 1233333333333445566553 467888888876665555555432 2221 1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018940 195 HADLENQYRWIAYSSIFIGCCFVGIFLSRTE 225 (348)
Q Consensus 195 ~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~ 225 (348)
...+|+..+++.+++.++..++. ++++
T Consensus 407 ---~~~~y~~~f~~~~~~~~i~~~~~-~~~~ 433 (476)
T PLN00028 407 ---SSYSTETGISLMGVMIIACTLPV-AFIH 433 (476)
T ss_pred ---CCccHhhHHHHHHHHHHHHHHHH-Hhee
Confidence 12358888887776666655444 3443
No 172
>PRK09848 glucuronide transporter; Provisional
Probab=98.74 E-value=1.1e-06 Score=85.47 Aligned_cols=150 Identities=13% Similarity=0.076 Sum_probs=96.5
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHH
Q 018940 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV 107 (348)
Q Consensus 29 ~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l 107 (348)
+.+..+.............+.|+++. |.++...+.......+...++.|+.++++||+|+||.+. .+.+..+++...+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~-~g~~~~~i~~~~~ 311 (448)
T PRK09848 233 LCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFL-IGALLGTCGYLLF 311 (448)
T ss_pred HHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-HHHHHHHHHHHHH
Confidence 33444444444444445556666776 887766666555556778889999999999999988864 5666666665443
Q ss_pred hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc------cchhHHHHHHHHHHHHHHHHHH
Q 018940 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST------SRVVLTSCRNAFTMVANLSLYA 181 (348)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~------~R~~~~~~~~~~~~ig~~~~~~ 181 (348)
.. .| ..+.+.. .+...+.++|.+....+..++.+|..+..| +++...+..+....+|..++..
T Consensus 312 ~~--~~-----~~~~~~~----~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 312 FW--VS-----VWSLPVA----LVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred HH--cC-----chhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 32 12 1222211 111235677777777788888888764221 2367788888888889888887
Q ss_pred HHHHHHHhc
Q 018940 182 IAFIVFSVS 190 (348)
Q Consensus 182 ~~~~~~~~~ 190 (348)
+.+.+++..
T Consensus 381 i~g~~l~~~ 389 (448)
T PRK09848 381 IPAFILGLS 389 (448)
T ss_pred HHHHHHHHc
Confidence 777766543
No 173
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.74 E-value=4.7e-07 Score=84.98 Aligned_cols=165 Identities=15% Similarity=0.045 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
.+..++|.|+++. |+++.++|.+.+...+...+.-|..|+++||+|.+|..+ .....+++....+..+ .+ ......
T Consensus 236 gfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~-~~f~~~~~~~~~l~~~-~~-~~~~~~ 312 (417)
T COG2223 236 GFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTL-AVFVGMALAAALLSLF-LT-GFGHGG 312 (417)
T ss_pred HHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHH-HHHHHHHHHHHHHHcc-cc-ccccCc
Confidence 4468899999887 999999999999999999999999999999999888754 4555555555443321 11 000001
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
+.......+. ...+..+..+.....+++.+.+ +|-+.+.++....+.+|+...+...+...+. .-
T Consensus 313 ~~~~~~~~~l----~l~~~~G~GnGsvfk~Ip~if~--~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~---------tg 377 (417)
T COG2223 313 SFVVFVAVFL----ALFVFAGLGNGSVFKMIPVIFP--KETGAVTGIVGAIGGLGGFFLPLAFGVSLDL---------TG 377 (417)
T ss_pred chHHHHHHHH----HHHHHhccCcchheeechHHHH--hhhhHHHHHHHHhccccccchhHHHHHHHHh---------cc
Confidence 1221222222 2233333444445677777653 4566666666555555543322221111111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 018940 201 QYRWIAYSSIFIGCCFVGIFLSRT 224 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~~ll~~~~~ 224 (348)
.++..|.++..+.+++.++.+...
T Consensus 378 ~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 378 SYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666566666665555443
No 174
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.73 E-value=5.6e-08 Score=70.48 Aligned_cols=58 Identities=26% Similarity=0.430 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHH
Q 018940 38 ITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGA 95 (348)
Q Consensus 38 ~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~ 95 (348)
...+...+|++.|+++.|+|+.++|.+.++..+...+++|++|.++||+||+|..+..
T Consensus 14 ~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred HHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 3344667999999999999999999999999999999999999999999999986543
No 175
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.73 E-value=5.4e-07 Score=85.67 Aligned_cols=133 Identities=14% Similarity=0.057 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
....++|.|+++. |.+..+.+.+.+...+...++.++.|+++||+||||.+. .+.....+.....+. .+ .
T Consensus 256 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~~~~--~~------~ 326 (405)
T TIGR00891 256 PIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYV-CSLLAGQLLIIPVFA--IG------A 326 (405)
T ss_pred hhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhH-HHHHHHHHHHHHHHH--hC------C
Confidence 3346678888775 999999999999999999999999999999999998754 344433222222221 11 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
+.....+.. .+.+...........++++|..+ +++|++..+..+....+|..+++.+.+.+.+
T Consensus 327 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 327 NVAVLGLGL----FFQQMLVQGIWGILPKHLGEYFP-TDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred chHHHHHHH----HHHHHHHccchhhHHHHHhhhCC-cchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 222111111 12333333333445567778774 6789999999888888888887766655553
No 176
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.73 E-value=6.4e-07 Score=87.63 Aligned_cols=177 Identities=12% Similarity=0.023 Sum_probs=97.1
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHH-------HHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIW-------HGAGSV 98 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~-------i~~~~~ 98 (348)
....+..+...........++|.|+++. |.+..+.|.+.++..+...++.++.|+++||+++||.. +..+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 343 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIG 343 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 4444555565666666678999999886 99999999999999999999999999999987644221 111111
Q ss_pred HHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHH
Q 018940 99 LVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLS 178 (348)
Q Consensus 99 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~ 178 (348)
.......... .+. . ..+........ .+.+.+.+...........+.. ++.++...++.+..+.+|+.+
T Consensus 344 ~~~~~~~~~~---~~~--~-~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~l~~~i 411 (465)
T TIGR00894 344 GLGPGIFAYA---LPY--L-SAAFYLTIIIL----TLANAVSSGPLAGVLINSLDLA--PRFLGFIKGITGLPGFIGGLI 411 (465)
T ss_pred HHHHHHHHHH---HHH--c-CCchHHHHHHH----HHHHHHhhhhhhhhhhchhhcC--hhHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 010 0 11111111111 1222222322333333444444 345677777777666666655
Q ss_pred HHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 018940 179 LYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLS 222 (348)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~ 222 (348)
++ .+.+.+... +...+|+..+.+.+++.++..++...
T Consensus 412 ~p----~l~g~~~~~---~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 412 AS----TLAGNILSQ---DSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HH----HhhheeeCC---CCchHHHHHHHHHHHHHHHHHHHeee
Confidence 44 333332210 11245888888887766666555443
No 177
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.72 E-value=9.8e-07 Score=81.43 Aligned_cols=167 Identities=14% Similarity=0.086 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 36 NDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
.+...+.+..++|.++.|.|+|+.+.|.+.+...+..+......-.+++|...+|++.......+.++...+.. .|
T Consensus 220 qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~--~P-- 295 (395)
T COG2807 220 QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLL--AP-- 295 (395)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH--hh--
Confidence 45566677899999999999999999999999999999999999999999877788776666666666654321 24
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
.... +.+. .++|.|.+....-....+.+-++++++-++++++.+. +|++++.. ++++++.+.
T Consensus 296 ---~~~~----~lw~---~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg---~GYllAa~-GP~l~G~lh---- 357 (395)
T COG2807 296 ---GQLP----ILWA---LLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQG---VGYLLAAF-GPWLFGFLH---- 357 (395)
T ss_pred ---hhHH----HHHH---HHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhh---hhHHHHhh-hhhhHhHHH----
Confidence 1221 1122 2566666555555556777767666666777776554 45555432 344555543
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018940 196 ADLENQYRWIAYSSIFIGCCFVGIFLSRTE 225 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~ 225 (348)
|...+|+...+..+...++..+..+..-|
T Consensus 358 -Da~gsw~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 358 -DATGSWSAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred -HhcCChHHHHHHHHHHHHHHHHHHhhcch
Confidence 33456887777666666555555544433
No 178
>TIGR00895 2A0115 benzoate transport.
Probab=98.71 E-value=6.3e-07 Score=84.83 Aligned_cols=132 Identities=15% Similarity=0.016 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcc
Q 018940 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~ 116 (348)
.........++|.+.++.|.++.+.+.+.++..+...++.++.|+++||+||| +..... ....+....+.. .
T Consensus 263 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~-~~~~~~~~~~~~---~--- 334 (398)
T TIGR00895 263 LVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-VTALLL-LLGAVFAVLVGS---T--- 334 (398)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-HHHHHH-HHHHHHHHHHHH---H---
Confidence 33344455677755555699999999999999999999999999999999988 433333 333333222221 0
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHH
Q 018940 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (348)
Q Consensus 117 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~ 183 (348)
..+...... ...+.+++.+.......+++.+..+ +++|++..++.+....+|..+++.+.
T Consensus 335 --~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~g~~~~ 394 (398)
T TIGR00895 335 --LFSPTLLLL----LGAIAGFFVNGGQSGLYALMALFYP-TAIRATGVGWAIGIGRLGAIIGPILA 394 (398)
T ss_pred --hhCHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 012221111 1135667777777777888888874 67899999988888777777655443
No 179
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.69 E-value=4.1e-07 Score=87.74 Aligned_cols=158 Identities=11% Similarity=0.005 Sum_probs=91.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhh--CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHh
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDI--GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVF 108 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~--g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~ 108 (348)
...+........+.+++|.|+++. |.|..+.+.+.....+...++.++.|+++||+||||..+....+...++..+..
T Consensus 249 ~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~ 328 (412)
T TIGR02332 249 LAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLAS 328 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHH
Confidence 333444444556678999999884 778899999999999999999999999999999887644434334333332221
Q ss_pred cCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 109 GGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
+ ..+...... .+ .+...+.............+.. ++++|+++.++.+....+|+.+++.+.+.+.+
T Consensus 329 ----~-----~~~~~~~~~--~~--~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 329 ----A-----TDHNLIQLL--GI--IMASMGSFSAMAIFWTTPDQSI-SLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred ----h-----cCCHHHHHH--HH--HHHHHHhhhhhhHHHhhccccc-chHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 1 011111111 11 0111222111111222223333 46789999999998888888776554433332
Q ss_pred hccCCcccchhhHHHHHHHHHHH
Q 018940 189 VSTAKTHADLENQYRWIAYSSIF 211 (348)
Q Consensus 189 ~~~~~~~~~~~~g~~~~~~i~~~ 211 (348)
. ..+|++.+.++++
T Consensus 395 ~---------~g~~~~~~~~~~~ 408 (412)
T TIGR02332 395 A---------TGSFNSGLWFVAA 408 (412)
T ss_pred c---------CCCCchhHHHHHH
Confidence 1 1247766655443
No 180
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.69 E-value=4.2e-06 Score=80.37 Aligned_cols=190 Identities=13% Similarity=0.125 Sum_probs=131.6
Q ss_pred hHhhHHhhhhhHHHHHHHHHHHHHHHHHHhhC-CChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHH
Q 018940 24 WSVLYYGSGHMLNDITAACWFTYLLLFLTDIG-LSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAV 102 (348)
Q Consensus 24 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g-~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i 102 (348)
++...+-+..+...........|.+.|++|.| .+....|.+++++.+..+..=...+++..|+|.|+.++ .+.+..++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~-~a~~~~~v 285 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLL-LALVAYAV 285 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHH
Confidence 34566777777888888888999999999995 88889999999999999999999999999999987754 45544444
Q ss_pred HHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHH-HHHHHHHHHHH
Q 018940 103 SFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNA-FTMVANLSLYA 181 (348)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~-~~~ig~~~~~~ 181 (348)
=. .++. ..+ .+.......-.+.-.+.|+.++....+...++.+.+| ++.|++..++.+. ...+|..+++.
T Consensus 286 R~-~l~a-~~~------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p-~~~~at~Q~l~~~~~~Glg~~iG~~ 356 (400)
T PF03825_consen 286 RW-LLYA-YFS------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAP-PELRATAQGLYSALSFGLGGAIGSL 356 (400)
T ss_pred HH-HHHH-Hhc------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCC-ccchHHHHHHHHHHHhhHHHHHHHH
Confidence 33 2321 010 1211111111110124667777777777788888874 6788999998766 35678888888
Q ss_pred HHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 018940 182 IAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~ 227 (348)
+++.+.+.++. +....|...+.+.+++.++..++.++..||+
T Consensus 357 igG~l~~~~g~----~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 357 IGGWLYDAFGA----RGMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHhcc----hhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 88888876653 1233455566667777777777777777764
No 181
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.68 E-value=3.1e-06 Score=80.64 Aligned_cols=139 Identities=12% Similarity=0.122 Sum_probs=89.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcC
Q 018940 33 HMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCM 112 (348)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~ 112 (348)
.+...........++++|.+|.|.++.+.|.+.++..+...+..++.|++.||+|+|+.+ ..+.+..++....+..
T Consensus 214 ~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l-~~~~~~~~~~~~~~~~--- 289 (382)
T PRK11128 214 VSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLL-LLSAICGVVRWGLMGS--- 289 (382)
T ss_pred HHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHh---
Confidence 333344444556788888887899999999999999999999999999999999998874 4566666665433321
Q ss_pred CCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHH-HHHHHHHHHHHHHHHHHH
Q 018940 113 PCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRN-AFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~-~~~~ig~~~~~~~~~~~~ 187 (348)
. .+.+ ..+ +...+.+++++....+...+..+. +++++++..+..+ ....+|..+++.+++.+.
T Consensus 290 ~------~~~~-~~~---~~~~l~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~ 353 (382)
T PRK11128 290 T------TALP-WLI---VIQILHCGTFTVCHLAAMRYIAAR--PGSEVIRLQALYSALAMGGSIAIMTVLSGFLY 353 (382)
T ss_pred h------hhHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHC--CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1222 211 122356666666666666666654 3455677777654 333445555555555544
No 182
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.68 E-value=4.4e-06 Score=81.93 Aligned_cols=157 Identities=14% Similarity=0.125 Sum_probs=104.7
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCc--hHHHHHHHHHH-
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHF--KIWHGAGSVLV- 100 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grr--r~~i~~~~~~~- 100 (348)
+...|-+..+...-....+..+...|.++. |+|..+...+..+..+..+++..++|++.||+|.| |.++ ......
T Consensus 282 ~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~-~~l~~~~ 360 (477)
T PF11700_consen 282 QLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLL-ISLILWI 360 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH-HHHHHHH
Confidence 345555554444444445567777888876 99999999999999999999999999999999988 6543 333333
Q ss_pred HHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHH
Q 018940 101 AVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (348)
Q Consensus 101 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~ 180 (348)
.+..+.++ +..+.... ..+ .+.+.. ...+.|+..+..+....++.+++.| +++.+...++....+..++.+++
T Consensus 361 ~i~~~g~~-G~~~~~~g-~~~-~~~f~~---~a~~~G~~~G~~qs~sRs~~~~LiP-~g~e~efFgly~i~gk~ss~lGP 433 (477)
T PF11700_consen 361 IIPLYGLF-GFWPSFFG-LKS-PWEFWV---LAVLIGLFMGGIQSASRSLFSRLIP-PGREAEFFGLYAITGKASSWLGP 433 (477)
T ss_pred HHHHHHHH-HhhhcccC-ccc-HHHHHH---HHHHHHHHhhhHHHHHHHHHHHhCC-CchhhHHHHHHHHHHHHHHHHHH
Confidence 22222222 00110000 112 223222 2246778888888889999999996 45668889999888888888877
Q ss_pred HHHHHHHHh
Q 018940 181 AIAFIVFSV 189 (348)
Q Consensus 181 ~~~~~~~~~ 189 (348)
.+.+.+.+.
T Consensus 434 ll~g~i~~~ 442 (477)
T PF11700_consen 434 LLFGLITDA 442 (477)
T ss_pred HHHHHHHHH
Confidence 766665544
No 183
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.66 E-value=4.1e-05 Score=77.82 Aligned_cols=171 Identities=13% Similarity=0.063 Sum_probs=106.7
Q ss_pred HHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc-cCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 44 FTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 44 ~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr-~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
...+..|+++. |.+...+..+........-+...+.|.++|+ +||+|.. +.+.++..++..++..+..| ....
T Consensus 7 ~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI-l~~~ii~~lG~~llai~a~~----~~~~ 81 (654)
T TIGR00926 7 RTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI-LYLSIVYVVGHALLSFGAIP----SSGH 81 (654)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHhccCc----cccc
Confidence 34556677665 9999999999999999999999999999996 6998875 46777777776554321111 0011
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchh
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST--SRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLE 199 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 199 (348)
.......+ +...+..+|.+..-.+..+...+..++++ +|.+...+.+...++|+.++..+.+.+-...+.. +..
T Consensus 82 ~~~~~~~l-~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f---g~~ 157 (654)
T TIGR00926 82 PLHDLLDL-LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF---GCQ 157 (654)
T ss_pred chHHHHHH-HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---ccC
Confidence 11111111 11134556777777778888888764322 2456677777788888777665543322111100 013
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhh
Q 018940 200 NQYRWIAYSSIFIGCCFVGIFLSR 223 (348)
Q Consensus 200 ~g~~~~~~i~~~i~~~~~ll~~~~ 223 (348)
.+|...|.+.++..++..++....
T Consensus 158 ~~~~~aF~i~~i~m~ia~lvf~~g 181 (654)
T TIGR00926 158 DCYPLAFGVPAILMILALIVFMAG 181 (654)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHh
Confidence 468888888877777666655443
No 184
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.65 E-value=1.2e-06 Score=84.84 Aligned_cols=151 Identities=19% Similarity=0.175 Sum_probs=104.8
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~ 105 (348)
....+..+.......+..++.++|.++. |.+ ...+.+..+..+...+..|++++++||+||||.+. .+....++...
T Consensus 228 ~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~-~~~~~~~~~~~ 305 (428)
T PF13347_consen 228 RILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYI-IGLLLAALGFL 305 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehh-hhHHHHHHHHH
Confidence 3444555555666666677777888886 666 56788888899999999999999999999999865 56666666655
Q ss_pred HHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc------cchhHHHHHHHHHHHHHHHH
Q 018940 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST------SRVVLTSCRNAFTMVANLSL 179 (348)
Q Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~------~R~~~~~~~~~~~~ig~~~~ 179 (348)
.++. .+ ..+.+... +...+.+++.+.......++.+|..+.+| +.+...+..+....++..++
T Consensus 306 ~~~~--~~-----~~~~~~~~----i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la 374 (428)
T PF13347_consen 306 LLFF--LG-----PGSPWLVL----ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLA 374 (428)
T ss_pred HHHH--HH-----hhhHHHHH----HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHH
Confidence 4432 22 12233222 22236778888887888889999875322 12567788888888888888
Q ss_pred HHHHHHHHHhc
Q 018940 180 YAIAFIVFSVS 190 (348)
Q Consensus 180 ~~~~~~~~~~~ 190 (348)
..+.+.++...
T Consensus 375 ~~i~g~~l~~~ 385 (428)
T PF13347_consen 375 GAIVGLLLALV 385 (428)
T ss_pred HHHHHHHHHHh
Confidence 87777776653
No 185
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.65 E-value=1.7e-06 Score=93.89 Aligned_cols=130 Identities=13% Similarity=0.145 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHhh-CCChh-HHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcc
Q 018940 39 TAACWFTYLLLFLTDI-GLSPR-GAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (348)
Q Consensus 39 ~~~~~~~~l~~~~~~~-g~s~~-~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~ 116 (348)
.......+++.|+++. |.+.. +.|++.+...+...+++++.|+++||+++|+.+. .+.+..+++...+.. .
T Consensus 247 ~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~-~~~~~~~~~~~~~~~--~---- 319 (1146)
T PRK08633 247 ISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVP-LGALGLALSLFLLPT--A---- 319 (1146)
T ss_pred HHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchh-HHHHHHHHHHHHHHH--h----
Confidence 3344557778888775 99998 9999999999999999999999999999887654 455555555433321 1
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHH
Q 018940 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (348)
Q Consensus 117 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~ 183 (348)
.+.....+ ...+++++.+....+..+++.+..+ +++|+++.+..+....+|..++..++
T Consensus 320 ---~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~p-~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 320 ---PSLASVLV----LFFLFGFSAGLFIVPLNALIQFRAP-EKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred ---hhHHHHHH----HHHHHHHHHHHhhHHHHHHHhhcCC-ccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 12221211 1235667777777777888888774 57899999988888887776655443
No 186
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.63 E-value=1.2e-06 Score=85.17 Aligned_cols=59 Identities=12% Similarity=0.169 Sum_probs=40.8
Q ss_pred HHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 44 FTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 44 ~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
..++|.|+++. .+.........+..+...+..|+.|+++||+|+||..+ .+.+..++..
T Consensus 272 s~~lp~~~~~~-~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~-~~~i~~~i~~ 330 (462)
T PRK15034 272 SAGFAMLAKTQ-FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTL-INFIFMAIFS 330 (462)
T ss_pred HHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHH-HHHHHHHHHH
Confidence 45677777663 33333444455677889999999999999999998754 4555444444
No 187
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.61 E-value=8.8e-06 Score=78.05 Aligned_cols=155 Identities=16% Similarity=0.058 Sum_probs=79.9
Q ss_pred HHHHHHHHhh-CCChhHHHHHHHHH-HHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccc
Q 018940 45 TYLLLFLTDI-GLSPRGAAAVMLSG-QIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (348)
Q Consensus 45 ~~l~~~~~~~-g~s~~~~g~i~~~~-~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 122 (348)
.+.++++.+. |.++.+.|.+.... .+...++.++.|++.||+||||.... +....++....... ... . ..+.
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~-~~~~~~l~~l~~~~--~~~--~-~~~~ 303 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLML-FGVLQAVSNLGYWV--LAV--T-PKHL 303 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHH--HHh--c-CCcH
Confidence 4455566665 99999999998654 45688889999999999999887543 33333333221110 000 0 0122
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHH
Q 018940 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQY 202 (348)
Q Consensus 123 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~ 202 (348)
+.......+.....+.+.+........++.+..+ .+++ +..+....++...++.+++.+. +..||
T Consensus 304 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~l~~~~~~~~~G~l~----------~~~G~ 368 (402)
T PRK11902 304 WTMALAIGIENLCGGMGTAAFVALLMALCNRSFS-ATQY----ALLSALASVGRVYVGPTSGYLV----------EAYGW 368 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-HHHH----HHHHHHHHHHHHHHHHHHHHHH----------HHhCh
Confidence 2111111111112333344444444444443332 2233 3333344455544443333433 24678
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018940 203 RWIAYSSIFIGCCFVGIF 220 (348)
Q Consensus 203 ~~~~~i~~~i~~~~~ll~ 220 (348)
+..+.+.++++++..++.
T Consensus 369 ~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 369 PGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888887776666554444
No 188
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.59 E-value=4.3e-06 Score=80.11 Aligned_cols=125 Identities=10% Similarity=-0.009 Sum_probs=84.2
Q ss_pred HHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccch
Q 018940 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (348)
Q Consensus 45 ~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 123 (348)
..++.|+++. |.|+.+.|.+.+...+...+++++.|++.||+++|+.. ..+. ..++....+.. + .+.+
T Consensus 226 ~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~-~~g~-~~~~~~~~~~~---~------~~~~ 294 (393)
T PRK11195 226 FLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL-PAGI-LMGLVVLLMAL---Q------HSLL 294 (393)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH-HHHH-HHHHHHHHHHH---H------hHHH
Confidence 4456677776 99999999999999999999999999999999987754 3443 22222221110 1 1222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCccc-chhHHHHHHHHHHHHHHHHHHHHHH
Q 018940 124 VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTS-RVVLTSCRNAFTMVANLSLYAIAFI 185 (348)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-R~~~~~~~~~~~~ig~~~~~~~~~~ 185 (348)
.. .+...+.+.+.+...++..+.+.+.. ++|. |++..+..+...+++..++..+.+.
T Consensus 295 ~~----~~~~~~~G~~~g~~~~~~~~~~q~~~-~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~ 352 (393)
T PRK11195 295 PA----YPLLILIGALGGFFVVPMNALLQHRG-HVLVGAGHSIAVQNFNENLAMLLMLGLYSL 352 (393)
T ss_pred HH----HHHHHHHHHhhhhhhhhHHHHHHhhC-cccccchhHHHHHhHHHHHHHHHHHHHHHH
Confidence 11 11122566777777788888887754 3333 6889888888888888777666543
No 189
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.59 E-value=0.00039 Score=67.87 Aligned_cols=253 Identities=8% Similarity=-0.028 Sum_probs=123.4
Q ss_pred ChhHHHHHHHHHHHHHHhh-hhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC-cCCC--cccCc---------cc--
Q 018940 57 SPRGAAAVMLSGQIADGFA-TIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG-CMPC--RILST---------ST-- 121 (348)
Q Consensus 57 s~~~~g~i~~~~~i~~~i~-~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~-~~~~--~~~~~---------~~-- 121 (348)
++..+.++-....+..++. .|+.+++++|++|+|.+-... ..+ +....+|.. ..|. .+.++ .+
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~-~~F-~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~ 118 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI-SPF-LGFFALFAFVIYPLSDLLHPTALADKLLSLLPPG 118 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH-HHH-HHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchh
Confidence 3467788887777776666 999999999999998764322 222 222222110 0121 00000 00
Q ss_pred chhH-----HHHHHHHHHHHHHHHHHHH-HhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 122 LKVE-----TISYCVFAAIFNVGWAATQ-VAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 122 ~~~~-----~~~~~l~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
..+. -..+.++.+...+-..... .-+++.+.|+++ .+|-.|..++...+.++|.++++.+...+.......+
T Consensus 119 ~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t-~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~- 196 (472)
T TIGR00769 119 FMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITT-IDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLG- 196 (472)
T ss_pred hHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-
Confidence 0000 0011121122333223222 357888999884 5677788899989999998887765433332100000
Q ss_pred cchhhHH----HHHHHHHHHHHHHHHHHHHhhccccc-c-c---------ccccCCchhHHHHHHHHHhHHHHHHHHHHH
Q 018940 196 ADLENQY----RWIAYSSIFIGCCFVGIFLSRTEEPR-L-K---------MGLRGNSHARISWAYWFKKILYYQVALVYM 260 (348)
Q Consensus 196 ~~~~~g~----~~~~~i~~~i~~~~~ll~~~~~~e~~-~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 260 (348)
.....| +..+.+.++.+.+... +..++.+.. . + ++++++.+.++.++.++|+|+++.++++.+
T Consensus 197 -~~~~~~~~~~~~l~~i~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi 274 (472)
T TIGR00769 197 -PGVDGWHVSLKNLMVIVICSGLAIIL-LYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLKFLVSSPYILDLALLVI 274 (472)
T ss_pred -cccChHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccCCccccchhhccccCCCCCCHHHHHHHHHhCHHHHHHHHHHH
Confidence 011223 2233333333333322 323322111 0 0 111223456788999999999887766655
Q ss_pred HHHHHHHhhhHHHHHHHhhcccccch---hhhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 261 LTRLVVNVSQAYLAFYVINDLRMGQS---AKALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~yl~~~~~~~~~---~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
+.....+....-.-..+.+..--+.+ ..+-+....++.+++..++.+++ +|+|.+
T Consensus 275 ~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 275 AYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 55444443332222223332211111 12223233344444445555776 999988
No 190
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.58 E-value=4.2e-06 Score=81.40 Aligned_cols=169 Identities=16% Similarity=0.084 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
.+..|....+++.|++..++-++.....+...++..+...+.||.|||+. ++.+...+++...++.. ........+
T Consensus 288 ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpL-ll~~~~~~~~~~~~~~~---~~~l~~~~~ 363 (485)
T KOG0569|consen 288 AIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPL-LLISLSLMAVALLLMSI---ALFLSNSFG 363 (485)
T ss_pred eeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHH---HHHHHHHhh
Confidence 33455666666779999999999999999999999999999999998755 55666666665543321 100011111
Q ss_pred chhHHHHHH--HHHHHHHHHHHHHHHh-HhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccch
Q 018940 122 LKVETISYC--VFAAIFNVGWAATQVA-HMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADL 198 (348)
Q Consensus 122 ~~~~~~~~~--l~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~ 198 (348)
.|. .|. ....++...++....| ..-+.+|+.+ ++.|..+.++......+...+.....+|+-..++
T Consensus 364 -~~~--~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~-~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g------- 432 (485)
T KOG0569|consen 364 -SWL--SYLCIAAIFLFIISFAIGPGPIPWFIGAELFP-QSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG------- 432 (485)
T ss_pred -hHH--HHHHHHHHHHHHHhhhcCCCchhHHHHHHhCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 111 111 1112333334333222 2346788885 6889999999988988888888877777655443
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 018940 199 ENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 229 (348)
Q Consensus 199 ~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~ 229 (348)
+ ..++++.+...+..+..++.+||.+.
T Consensus 433 --~--~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 433 --P--YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred --c--hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 1 34666778888888889999999653
No 191
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.57 E-value=1.1e-05 Score=77.22 Aligned_cols=153 Identities=20% Similarity=0.073 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~-~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
....++++++.+ .|.++.+.|.+.....+...++..+.|++.||.+| +.++.......+....+... + .
T Consensus 234 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~~---~------~ 303 (394)
T PRK10213 234 AFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTLW---G------S 303 (394)
T ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHH---h------h
Confidence 345666454444 59999999999999999999999999999999644 44333222222222222111 1 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
+.+.... ...+.+++++.......+++.+..+ +++++..+......++|..+++.+++.+.+. .
T Consensus 304 ~~~~~~~----~~~l~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~----------~ 367 (394)
T PRK10213 304 DKIVATG----VAIIWGLTFALVPVGWSTWITRSLA--DQAEKAGSIQVAVIQLANTCGAAIGGYALDN----------I 367 (394)
T ss_pred hHHHHHH----HHHHHHHHHHhhhHHHHHHHHHHCc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------c
Confidence 2221111 1235677777777777777776653 4455666666666677777777776666532 3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 018940 201 QYRWIAYSSIFIGCCFVGIF 220 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~~ll~ 220 (348)
|++..+...+++..+..++.
T Consensus 368 g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 368 GLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred ChhhHHHHHHHHHHHHHHHH
Confidence 45555555555444444333
No 192
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.57 E-value=3.7e-06 Score=80.45 Aligned_cols=155 Identities=12% Similarity=-0.003 Sum_probs=90.7
Q ss_pred HHHHHHHHHHhh----CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccC
Q 018940 43 WFTYLLLFLTDI----GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (348)
Q Consensus 43 ~~~~l~~~~~~~----g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~ 118 (348)
.....+.|+++. +.+..+.|.+.++..+...+..+..|++.||+||||.+ ..+....++.......
T Consensus 234 ~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l-~~~~~l~~l~~~~~~~--------- 303 (396)
T TIGR00882 234 FDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNAL-LIAGTIMSVRIIGSSF--------- 303 (396)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH-HHHHHHHHHHHHHHHh---------
Confidence 334556666653 45667889999999999999999999999999999875 4555555555433221
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCcccc
Q 018940 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSC-RNAFTMVANLSLYAIAFIVFSVSTAKTHAD 197 (348)
Q Consensus 119 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~-~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
..+.+...+.. .+.+++.+...........+..+ ++.|+...+. .+....+|..+++.+.+.+.+
T Consensus 304 ~~~~~~~~~~~----~l~g~~~~~~~~~~~~~~~~~~~-~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~--------- 369 (396)
T TIGR00882 304 ATTALEVVILK----MLHAFEVPFLLVGCFKYITSQFD-VRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD--------- 369 (396)
T ss_pred cCChHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCC-cceEEEeehHHHHHHHHHHHHHHHHhHHHHHH---------
Confidence 11222222211 23444444433323333333332 2333443333 345666677776666555553
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHh
Q 018940 198 LENQYRWIAYSSIFIGCCFVGIFLS 222 (348)
Q Consensus 198 ~~~g~~~~~~i~~~i~~~~~ll~~~ 222 (348)
..||+..+.+.+++..+..++..+
T Consensus 370 -~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 370 -SIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred -hcccHHHHHHHHHHHHHHHHHHHH
Confidence 347888888777777766666544
No 193
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.57 E-value=1.8e-06 Score=81.03 Aligned_cols=145 Identities=12% Similarity=0.027 Sum_probs=85.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCC-chHHHHHH-HHHHHHHHHHH
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGH-FKIWHGAG-SVLVAVSFSSV 107 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Gr-rr~~i~~~-~~~~~i~~~~l 107 (348)
+..+...........+.+.|+++. |.++.+.+.+.+...+...++.++.|+++||.++ ||..+... .....+.....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY 302 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Confidence 333334444445567888898876 9999999999999999999999999999998643 33222111 11111222111
Q ss_pred hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
+. .+ ..+.... ... ....+...............|..+ +++|++..++.+....+|+.+++.+.+.+.
T Consensus 303 ~~--~~-----~~~~~~~-~~~---~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 370 (379)
T TIGR00881 303 WL--NP-----AANPLMD-LIC---LFALGFLVYGPQMLIGVIASELAP-KKAAGTAAGFVGFFAYLGGILAGLPLGYLA 370 (379)
T ss_pred hc--Cc-----chhHHHH-HHH---HHHHHHHHhhhhHHHHHHHHHhcC-cchhHHHHHHHHHhhhhhhhhhhhhHHHHH
Confidence 11 11 1121111 111 112332222222333456677764 678999999998888888887766655554
No 194
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.55 E-value=2.9e-06 Score=80.98 Aligned_cols=61 Identities=13% Similarity=0.006 Sum_probs=48.5
Q ss_pred HHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHH
Q 018940 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSS 106 (348)
Q Consensus 45 ~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~ 106 (348)
.+.+.++++. |.++.+.|.+.+...+...++.++.|+++||+||||.++ .+.....++...
T Consensus 224 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~-~~~~~~~~~~~~ 285 (392)
T PRK10473 224 NTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLML-TSQVLFLAAGIT 285 (392)
T ss_pred HhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHH
Confidence 4456666665 999999999999999999999999999999999988754 565555555543
No 195
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.55 E-value=3.5e-06 Score=80.96 Aligned_cols=131 Identities=13% Similarity=0.080 Sum_probs=85.3
Q ss_pred HHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcc-cCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccc
Q 018940 44 FTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (348)
Q Consensus 44 ~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr-~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 122 (348)
..++|.|.++.+.++.+.|.+.++..+.......+.+++.|| ++.++.. ..+....+++...+.. .+ +.
T Consensus 228 ~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~~~~l~~--~~-------~~ 297 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRL-MAGLLIMSLSMFPIGM--VS-------NL 297 (400)
T ss_pred HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHHHHHHHH--hh-------hH
Confidence 456788888874577889999888777776666666777775 5555443 4555555555433321 11 22
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018940 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (348)
Q Consensus 123 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~ 189 (348)
..... ...+.+.+.+...++..+++.+..+ +++|++..++.+....+|..+++.+.+.+.+.
T Consensus 298 ~~~~~----~~~l~~~g~~~~~p~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 298 QQLFT----LICLFYIGSIIAEPARETLSASLAD-ARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHH----HHHHHHHHHHHHHccHHHHHHhcCC-cccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 21111 1124555666666667778888774 67899999999988888888887777776653
No 196
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.55 E-value=9.1e-06 Score=76.88 Aligned_cols=55 Identities=16% Similarity=0.212 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHH
Q 018940 43 WFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSV 98 (348)
Q Consensus 43 ~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~ 98 (348)
...+.+.++.+. |.++.+.|.+..+..+...++.++.|++.||+||||.+. .+..
T Consensus 213 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-~~~~ 268 (377)
T PRK11102 213 FLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLR-FGLW 268 (377)
T ss_pred HHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH-HHHH
Confidence 344556677775 999999999999999999999999999999999988754 3443
No 197
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.54 E-value=8.9e-06 Score=77.31 Aligned_cols=142 Identities=13% Similarity=0.017 Sum_probs=80.5
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccC---CchHHHHHHHHHHHHHH
Q 018940 28 YYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFG---HFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 28 ~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~G---rrr~~i~~~~~~~~i~~ 104 (348)
......+...........++|.|+++.|.|.. .+....+..+...++. |+++||.. ||+..........++..
T Consensus 196 ~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~---~~~~d~~~r~~~r~~~~~~~~~~~a~~~ 271 (368)
T TIGR00903 196 IIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIGV---AVIPDRVARAGLRSIYIRAAALLIAAFF 271 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHH---HHhhHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 33334444555555667899999987788764 6666666666666554 67777654 34443332333333332
Q ss_pred HHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018940 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~ 184 (348)
..+.. . .+...... .. .+.+.+.........++.+|..| ++.|++..++.+..+.+|+..++.+.+
T Consensus 272 ~~~~~---~------~~~~~~~~-~~---~l~~~~~~~~~~~~~~~~~~~~p-~~~rgt~~G~~~~~g~~~~~~~~~~~~ 337 (368)
T TIGR00903 272 LALAF---E------LNRLALFA-FI---GIAGLLMLPAYAIIMDWIGKFCD-KELHGKAAGAIGFTSRAISVALALAAM 337 (368)
T ss_pred HHHHH---c------cccHHHHH-HH---HHHHHhhhhhHHHHHHHHHHhcc-hhhcCcccchhhHHHHHHHHHHHHHHH
Confidence 22111 1 11111111 11 12333333333446678889885 678999999999988898877665544
Q ss_pred HHH
Q 018940 185 IVF 187 (348)
Q Consensus 185 ~~~ 187 (348)
.++
T Consensus 338 ~~~ 340 (368)
T TIGR00903 338 LFI 340 (368)
T ss_pred HHh
Confidence 443
No 198
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.53 E-value=5.1e-06 Score=90.29 Aligned_cols=153 Identities=10% Similarity=-0.024 Sum_probs=98.3
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH-H
Q 018940 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS-S 106 (348)
Q Consensus 29 ~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~-~ 106 (348)
..++.+......+....++|.|+++. |.++.+.|++.+...+...+++++.|+++||.++++... .+.+..++... +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~-~~~~~~~~~~~~l 308 (1140)
T PRK06814 230 AILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVP-IGALLMGLFGLDL 308 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeeh-HHHHHHHHHHHHH
Confidence 33444444444556667889999886 999999999999999999999999999999887766543 33333333222 1
Q ss_pred HhcCc---CCCc-------ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHH
Q 018940 107 VFGGC---MPCR-------ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN 176 (348)
Q Consensus 107 l~~~~---~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~ 176 (348)
.+... .+.. +....+.+.. .+..++++++.+...++..+++.+.++ +++|+++.+..+....++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~G~v~g~~~~~~~~~~ 383 (1140)
T PRK06814 309 AFASSSVPAEPAQLKSILVFLSKRHGWRI----LIDLFGLAAAGGLYIVPLFAALQAWAN-PAHRARVIAANNVLNAAFM 383 (1140)
T ss_pred HhcccccccccccccchhhhhcccccHHH----HHHHHHHHHHHHHhHHHHHHHHHhhCC-cccceeeeHHHHHHHHHHH
Confidence 11000 0000 0000111211 112235677777788888889888875 6789999999888888877
Q ss_pred HHHHHHHHHHH
Q 018940 177 LSLYAIAFIVF 187 (348)
Q Consensus 177 ~~~~~~~~~~~ 187 (348)
.+++.+.+.+.
T Consensus 384 ~ig~~~~g~l~ 394 (1140)
T PRK06814 384 VAGTIILALLQ 394 (1140)
T ss_pred HHHHHHHHHHH
Confidence 77666554443
No 199
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.52 E-value=3.3e-06 Score=78.59 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=94.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHhh-CCC-hhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHH
Q 018940 30 GSGHMLNDITAACWFTYLLLFLTDI-GLS-PRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV 107 (348)
Q Consensus 30 ~~g~~~~~~~~~~~~~~l~~~~~~~-g~s-~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l 107 (348)
....+...........++|.|+++. |.+ ..+.+.+..+..+...++.++.|+++||+|+|+.... ......+....+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~ 290 (352)
T PF07690_consen 212 LIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLI-AILLLILGALGL 290 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH-HHHHHHHHHHHH
Confidence 3344444445555678888886665 999 8999999999999999999999999999998777543 444444444333
Q ss_pred hcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHH
Q 018940 108 FGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSL 179 (348)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~ 179 (348)
.. .+ ...+..+... ...+.+++.+...+...++..+..+ +|+|++..+..+...++|+.++
T Consensus 291 ~~--~~----~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 291 LL--LP----FSSSPVWLII----ALFLIGFGFGIVFPILFSLIQELVP-PEYRGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp CC--SH----HHCHHHHHHH----HHHHHHHHHHHHCHHHHHHHHCCCH-TCHHHHHHHHHHHHHHHHHHHH
T ss_pred HH--HH----HhhhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHC
Confidence 21 11 0111222211 1235677777777778888888874 5789999999988888887764
No 200
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.51 E-value=1.3e-05 Score=75.78 Aligned_cols=124 Identities=16% Similarity=0.102 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc
Q 018940 41 ACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (348)
Q Consensus 41 ~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~ 119 (348)
.....+.|.++++. |.++.+.|.+.....+...++.++.|+++||+||||... .+.....++...+.. .+ ...
T Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~---~~~ 296 (385)
T TIGR00710 223 FAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLR-MGLILFAVSAVLLEI--TA---ILG 296 (385)
T ss_pred HHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHH--HH---Hhc
Confidence 34455667788765 999999999999999999999999999999999988754 455555544432221 01 000
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHH
Q 018940 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVA 175 (348)
Q Consensus 120 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig 175 (348)
.+.... ......+.+.+.+.......+...|.. +++|++..+..+.....+
T Consensus 297 ~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~ 347 (385)
T TIGR00710 297 LGSWAM---IIGPMMFVGIGNSMISSIAMAYALEDF--PHVAGTASALFGTLRLVL 347 (385)
T ss_pred cchHHH---HHHHHHHHHHHHHHHHHHHHHHHhccC--cccchHHHHHHHHHHHHH
Confidence 011111 111112455555555554445555543 457888888776554443
No 201
>PRK10054 putative transporter; Provisional
Probab=98.49 E-value=9.2e-06 Score=77.90 Aligned_cols=174 Identities=9% Similarity=0.064 Sum_probs=98.3
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHh---hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 28 YYGSGHMLNDITAACWFTYLLLFLTD---IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 28 ~~~~g~~~~~~~~~~~~~~l~~~~~~---~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
.+.+..+...........+.+.|..+ .+.+....|.+..+..+.....+++.|++.||+|+|+.. ..+....+++.
T Consensus 210 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-~~~~~~~~~~~ 288 (395)
T PRK10054 210 WFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLM-TAGTLCFVIGL 288 (395)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHH-HHHHHHHHHHH
Confidence 33344444333333333455555543 367777889999998888888899999999999988764 45555555554
Q ss_pred HHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018940 105 SSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 105 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~ 184 (348)
..+.. . .++.... .+...+.+.+.....+...+.+.+..+ ++.|++..+..+ ...+|..+++.+.+
T Consensus 289 ~~~~~---~-----~~~~~~~----~~~~~~~~~g~~~~~p~~~~~~~~~~p-~~~~~~~~~~~~-~~~~G~~~Gp~~~G 354 (395)
T PRK10054 289 VGFIF---S-----GNSLLLW----GMSAAVFTVGEIIYAPGEYMLIDHIAP-PGMKASYFSAQS-LGWLGAAINPLVSG 354 (395)
T ss_pred HHHHH---c-----chHHHHH----HHHHHHHHHHHHHHHhhHHHHHHHhCC-cccceehHhHHH-HHHHHHHHHHHHHH
Confidence 32211 1 1122211 111235566665555555667777764 467777766543 44466666666665
Q ss_pred HHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018940 185 IVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEE 226 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e 226 (348)
.+.+. .|.+..+.+.++...+..++.....+|
T Consensus 355 ~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (395)
T PRK10054 355 VILTT----------LPPWSLFVILALAIVAAWLLMLKGMRA 386 (395)
T ss_pred HHHHH----------cChhhHHHHHHHHHHHHHHHHHhcccc
Confidence 65543 244555555444444443444333344
No 202
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.48 E-value=2.5e-06 Score=84.48 Aligned_cols=172 Identities=11% Similarity=-0.066 Sum_probs=88.6
Q ss_pred HHHHHHHHHhhCCChhHHHH------------HHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCc
Q 018940 44 FTYLLLFLTDIGLSPRGAAA------------VMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (348)
Q Consensus 44 ~~~l~~~~~~~g~s~~~~g~------------i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~ 111 (348)
..+.|.++++.|.+..+.+. ...+..+...++..+.|+++||+|||+.++ .+....++....+.. .
T Consensus 308 ~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~-~~~~~~~~~~~~l~~-~ 385 (502)
T TIGR00887 308 NLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQL-MGFFILTVLFFVLGF-A 385 (502)
T ss_pred ccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHH-HHHHHHHHHHHHHHH-H
Confidence 34567777766775432211 122334455567788999999999987754 455554544432211 0
Q ss_pred CCCcccCcccchhHHHHHHHHHHHHHHHHHH-HHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018940 112 MPCRILSTSTLKVETISYCVFAAIFNVGWAA-TQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (348)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~ 190 (348)
.. ........ ..+. .....++. .......+.+|+.| .+.|++..++.+..+.+++.+++.+.+.+...-
T Consensus 386 ~~----~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~E~~p-~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 455 (502)
T TIGR00887 386 YN----HLSTHGFL-AIYV----LAQFFANFGPNATTFIVPGEVFP-TRYRSTAHGISAASGKAGAIIGQFGFLYLAQHG 455 (502)
T ss_pred HH----hcchhHHH-HHHH----HHHHHHhcCCCchhhhhhhccCc-hhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccc
Confidence 00 00011111 1111 11111111 11123345678875 578999999999888888888776655444311
Q ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 191 ~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
+...+.+...++...+.+++++.++..+. .+++||.+
T Consensus 456 ~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~ 492 (502)
T TIGR00887 456 DPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETK 492 (502)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHH-heEeccCC
Confidence 00000000134455666666666655443 45678854
No 203
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.45 E-value=3.1e-05 Score=76.82 Aligned_cols=154 Identities=12% Similarity=0.006 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
.....+|.+.++. |.++...|++.+...+...++..+.+++.+|.++++.. ..+.+..++++..+.. . .
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv-~~~~~~~a~~~~~lal--~-------~ 305 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV-LLASLLFALALLLLAL--S-------P 305 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh-HHHHHHHHHHHHHHhc--c-------h
Confidence 3345567777776 99999999999999999999999999999999887764 4566666665543321 1 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhh
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLEN 200 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
+.+..... ..+.|.+........++.+.+.+| ++.|+++.+..+.....+..+++.+.+.+... .
T Consensus 306 ~~~~~~~~----l~l~G~~~~~~~~~~~t~~Q~~~P-~~~~GRv~si~~~~~~g~~~lGsll~G~la~~----------~ 370 (524)
T PF05977_consen 306 SFWLALIA----LFLAGAAWIIANSSLNTLVQLSVP-DWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH----------F 370 (524)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhCC-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH----------h
Confidence 22222111 135667777777777777777764 67899999998877777777777666665543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 018940 201 QYRWIAYSSIFIGCCFVGIF 220 (348)
Q Consensus 201 g~~~~~~i~~~i~~~~~ll~ 220 (348)
|-+..+.+.++..++..++.
T Consensus 371 g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 371 GVRTALLIAGAALLLSALIA 390 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 44555555554444444433
No 204
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.42 E-value=7.6e-06 Score=76.95 Aligned_cols=129 Identities=11% Similarity=0.064 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHH-HHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCC
Q 018940 36 NDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQ-IADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPC 114 (348)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~-i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~ 114 (348)
..........++++|+++.|.++.+.|.+..+.. +...++.++.|+++||+||||..+ .+.+..++....... .+.
T Consensus 221 ~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~-~~~~~~~~~~~~~~~--~~~ 297 (356)
T TIGR00901 221 YKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALL-LFGIVQALTNAGFVW--LAS 297 (356)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHHH--HHh
Confidence 3444445567888898888999999998887655 567788999999999999988754 455555554432211 110
Q ss_pred cccC----cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHH
Q 018940 115 RILS----TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFT 172 (348)
Q Consensus 115 ~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~ 172 (348)
.... ..+.+.. .....+.+++.+...++..+++.+.+| +++|++..++.+...
T Consensus 298 ~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 298 NGHHDGITFPHLLML----FLTITLEAVTGGLGTVAFVAFLSKLSN-PKFGATQMALLSSLS 354 (356)
T ss_pred cCcccccccchHHHH----HHHHHHHHHHhHHHHHHHHHHHHHhcC-CCccHHHHHHHHHHH
Confidence 0000 0111111 111124567777888888999999885 688999988776554
No 205
>PRK09669 putative symporter YagG; Provisional
Probab=98.41 E-value=4.4e-05 Score=74.29 Aligned_cols=135 Identities=15% Similarity=0.096 Sum_probs=81.5
Q ss_pred HHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccc
Q 018940 44 FTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (348)
Q Consensus 44 ~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 122 (348)
....++|.++. +. +...+.+.....+...++.+++++++||+||||.+. .+....++....++. .+ ..+.
T Consensus 249 ~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~-~~~~~~~~~~~~~~~--~~-----~~~~ 319 (444)
T PRK09669 249 GGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFK-WTIVAFVILSALIFF--IP-----PSNV 319 (444)
T ss_pred hhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH-HHHHHHHHHHHHHHH--hC-----cchH
Confidence 34343443444 33 334445666667778888899999999999998865 344443332222221 12 1222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 018940 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST------SRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (348)
Q Consensus 123 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~------~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~ 191 (348)
. .. .+...+.+++.+.......++++|..+..| +.+...+..+....+|..+++.+.+.+++..+
T Consensus 320 ~-~~---~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 320 W-LI---FALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred H-HH---HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 11 112236777788777778889988764211 12346677777888888888888777776543
No 206
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.41 E-value=3.6e-05 Score=75.59 Aligned_cols=151 Identities=11% Similarity=0.074 Sum_probs=91.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
...+...........+.++|.+...-++...+.+..+..+...++.|++++++||+||||.++ .+....+++....+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~-~~~~~~~~~~~~~~~- 315 (473)
T PRK10429 238 GMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWA-GASIFPVLSCGVLLL- 315 (473)
T ss_pred HHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH-HHHHHHHHHHHHHHH-
Confidence 334444444455556655554544335667777888778889999999999999999998865 454444444332221
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcc----c--chhHHHHHHHHHHHHHHHHHHHHH
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNST----S--RVVLTSCRNAFTMVANLSLYAIAF 184 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~--R~~~~~~~~~~~~ig~~~~~~~~~ 184 (348)
.. +....+.. .. .+...+.+++.+.......++++|..+..| + .+...+.......+|..+++.+.+
T Consensus 316 -~~--~~~~~~~~-~~---~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 316 -MG--LAAPHNAL-LI---VIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred -Hh--ccCchhHH-HH---HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00111212 21 112235667777777777888988864211 1 234677777788888888888877
Q ss_pred HHHHhc
Q 018940 185 IVFSVS 190 (348)
Q Consensus 185 ~~~~~~ 190 (348)
.+++..
T Consensus 389 ~~l~~~ 394 (473)
T PRK10429 389 VVLGLI 394 (473)
T ss_pred HHHHHc
Confidence 777654
No 207
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.38 E-value=1.9e-05 Score=73.36 Aligned_cols=243 Identities=12% Similarity=0.044 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhc-----ccCCchHHHHHHHHHHHHHHHHHhcCc
Q 018940 37 DITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELID-----RFGHFKIWHGAGSVLVAVSFSSVFGGC 111 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~D-----r~Grrr~~i~~~~~~~~i~~~~l~~~~ 111 (348)
.+..++.. -+|..++.-|.|-++.|.....+.=. -....+..+.| |+||||.|+.-...+....+..+-. +
T Consensus 44 GiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~-~ 119 (510)
T KOG3574|consen 44 GIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSY-L 119 (510)
T ss_pred CCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhh-C
Confidence 44444444 45555554488888877654443211 13567888888 8999999987554444444433221 2
Q ss_pred CCCccc-CcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 018940 112 MPCRIL-STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS-- 188 (348)
Q Consensus 112 ~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~-- 188 (348)
++-... +...+......+.+ .++++..+...++..++.-.+- ++|+-+-++.....+.+.|..++..+...+-.
T Consensus 120 v~~~~g~ng~~p~v~~lt~~f--~LLnflaAtQDIAVDgwALtmL-s~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~d 196 (510)
T KOG3574|consen 120 VDRGLGGNGGLPNVVALTLLF--LLLNFLAATQDIAVDGWALTML-SRENLGYASTCQSVGQTAGYFLGNVVFLALESPD 196 (510)
T ss_pred CCcccccCCCCcchHHHHHHH--HHHHHHHhhhhhhhhHHHHHhc-CHhhcCchhHHHHHHHhhhHHhhcceeeEecChh
Confidence 332222 11111112221111 2566666777777777776666 45677888887777888887776544211110
Q ss_pred h----ccCCcccc----hhhHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCchhHHHH---HHHHHhHHHHHHHH
Q 018940 189 V----STAKTHAD----LENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISW---AYWFKKILYYQVAL 257 (348)
Q Consensus 189 ~----~~~~~~~~----~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l 257 (348)
+ +-.. +.| .-.|+-| ..+.+.++...+..+.-+|+++...++.+...++.+ ++.++-|..+++.+
T Consensus 197 F~N~y~rs~-P~~~g~ItL~gy~~---fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~ 272 (510)
T KOG3574|consen 197 FCNTYLRSI-PLDQGFITLAGYLW---FWGALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAG 272 (510)
T ss_pred hhhHHHhcC-cCccceEEhhHHHH---HHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHH
Confidence 0 0000 000 0112221 223344444455555666644332222233334444 45566677777777
Q ss_pred HHHHHHHHHHhhhHHHHHHHhhcccccchhhhHH
Q 018940 258 VYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALV 291 (348)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 291 (348)
.....-.+..+.....+.-+.|+ |.+.++.++.
T Consensus 273 i~lt~K~gf~a~da~t~LkLle~-Gv~ke~Lal~ 305 (510)
T KOG3574|consen 273 ILLTGKLGFQAADALTSLKLLEH-GVPKEELALI 305 (510)
T ss_pred HHHHHHHHhhhhhhccchHHHHc-CCChhHheee
Confidence 66666677778888888888876 8877765543
No 208
>PRK10133 L-fucose transporter; Provisional
Probab=98.36 E-value=4.4e-05 Score=74.33 Aligned_cols=111 Identities=14% Similarity=0.016 Sum_probs=72.4
Q ss_pred HHHHHHHHHHH-Hhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccC
Q 018940 41 ACWFTYLLLFL-TDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (348)
Q Consensus 41 ~~~~~~l~~~~-~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~ 118 (348)
.....|++.|+ ++. |.|+.+.|.......+...++.++.|++.||+||||... .+....++.+..... .+
T Consensus 275 ~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~-~~~~~~~~~~~~~~~--~~----- 346 (438)
T PRK10133 275 TACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLA-AYALIAMALCLISAF--AG----- 346 (438)
T ss_pred HHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH-HHHHHHHHHHHHHHH--cC-----
Confidence 33456778785 555 999999999999999999999999999999999998754 444443333322211 11
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHH
Q 018940 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCR 168 (348)
Q Consensus 119 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~ 168 (348)
+.. ....+ .+.+++.+...++..+...+..+ ++.+..+++.
T Consensus 347 --~~~-~~~~~----~l~glg~~~i~P~~~s~a~~~~~--~~~~~as~l~ 387 (438)
T PRK10133 347 --GHV-GLIAL----TLCSAFMSIQYPTIFSLGIKNLG--QDTKYGSSFI 387 (438)
T ss_pred --ChH-HHHHH----HHHHHHHHHHHHHHHHHHHcccc--hhhccchhHH
Confidence 111 11111 25677778777777777766542 3344555544
No 209
>TIGR00898 2A0119 cation transport protein.
Probab=98.36 E-value=4.5e-05 Score=75.36 Aligned_cols=147 Identities=12% Similarity=-0.022 Sum_probs=84.8
Q ss_pred hhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHH
Q 018940 53 DIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVF 132 (348)
Q Consensus 53 ~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 132 (348)
+.+.+..... ....+....+.++.++++||+|||+.+. .+.+..+++...+.. .+ ...........
T Consensus 352 ~~~~~~~~~~---~~~~~~~i~~~~~~~~l~dr~grr~~~~-~~~~~~~~~~l~~~~--~~-----~~~~~~~~~~~--- 417 (505)
T TIGR00898 352 NLGGNIYLDL---FISGLVELPAKLITLLLIDRLGRRYTMA-ASLLLAGVALLLLLF--VP-----VDLYFLRTALA--- 417 (505)
T ss_pred ccCCChHHHH---HHHHHHHHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHHHHH--cC-----CCchHHHHHHH---
Confidence 3455543333 3445666778889999999999998754 555555555543321 22 11111111111
Q ss_pred HHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHH
Q 018940 133 AAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFI 212 (348)
Q Consensus 133 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i 212 (348)
.+.+.+.+.......++.+|..| ++.|++..++.+....+|+++++.+.+ + ...++...+.+++..
T Consensus 418 -~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-----------~~~~~~~~~~~~~~~ 483 (505)
T TIGR00898 418 -VLGKFGITSAFQMVYLYTAELYP-TVVRNLGVGVCSTMARVGSIISPFLVY-L-----------GEKWLFLPLVLFGGL 483 (505)
T ss_pred -HHHHHHHHHHHHHHHHHhccccc-HHHHhhhHhHHHHHHHHHHHHHhHHHH-H-----------HHHHHhhHHHHHHHH
Confidence 12333344444445677788875 567999988888887888777655433 1 123455566666666
Q ss_pred HHHHHHHHHhhccccc
Q 018940 213 GCCFVGIFLSRTEEPR 228 (348)
Q Consensus 213 ~~~~~ll~~~~~~e~~ 228 (348)
.++..++. .+.||.+
T Consensus 484 ~~~~~~~~-~~lpet~ 498 (505)
T TIGR00898 484 ALLAGILT-LFLPETK 498 (505)
T ss_pred HHHHHHHH-HcCcCCC
Confidence 66655554 4567754
No 210
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.35 E-value=4.8e-05 Score=70.53 Aligned_cols=123 Identities=10% Similarity=-0.035 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHhh---CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcc
Q 018940 40 AACWFTYLLLFLTDI---GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI 116 (348)
Q Consensus 40 ~~~~~~~l~~~~~~~---g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~ 116 (348)
...+..+++.|++|. |+++.+.+...+......+++..+.++++||+|+||.+ ..+....++...+... .+
T Consensus 156 e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l-~~~~~l~~~~~~l~~~--~~--- 229 (310)
T TIGR01272 156 EVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL-AFNAFLAVLLSIGAAL--TH--- 229 (310)
T ss_pred HHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH-HHHHHHHHHHHHHHHH--cC---
Confidence 345568899999752 99999999999999999999999999999999998864 4555555554432221 11
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHH
Q 018940 117 LSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (348)
Q Consensus 117 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~ 180 (348)
+.. .. +.+ .+.+++.+...+...++..+..+ ++.+..+++. ....+|+.+.+
T Consensus 230 ----~~~-~~--~~~--~l~g~~~s~i~P~~~s~a~~~~~--~~~~~asai~-~~~~~Gg~i~P 281 (310)
T TIGR01272 230 ----GYV-AM--WFV--LALGLFNSIMFPTIFSLALNALG--RHTSQGSGIL-CLAIVGGAIVP 281 (310)
T ss_pred ----CHH-HH--HHH--HHHHHHHHHHHHHHHHHHHhhhh--hhhhhhHHHH-HHHHhcchHHH
Confidence 111 11 111 24566666666665566655443 2334455543 34445554443
No 211
>PRK11043 putative transporter; Provisional
Probab=98.34 E-value=6e-05 Score=72.08 Aligned_cols=131 Identities=15% Similarity=0.113 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
....+.|.++++.|.++.+.|.......+...++..+.+++.||+|+||.. ..+.+..++....++. ... ....+
T Consensus 221 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~-~~~~~~~~~~~~~~~~--~~~--~~~~~ 295 (401)
T PRK11043 221 AWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL-PWLLVLFAVSVIAIWL--ASL--LSHPS 295 (401)
T ss_pred HHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-HHHHHHHHHHHHHHHH--HHH--hccCc
Confidence 344667777776799999999988888888888999999999999988754 2333333333221110 000 00112
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~ 183 (348)
.....+.. .+.+.+.+.......+...+.. +++|++..++.+.....++..++.+.
T Consensus 296 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~~~~~~~~~~ 351 (401)
T PRK11043 296 LVPLLIPF----CVMAAANGAIYPIVVAQALRPF--PQATGKAAALQNTLQLGLCFLASLLV 351 (401)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHHHhhhC--cccChHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 2344555554444444443433 46789999988876655555544433
No 212
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.34 E-value=1.7e-05 Score=77.52 Aligned_cols=179 Identities=14% Similarity=0.052 Sum_probs=105.2
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccC--------CchHHHHHH
Q 018940 26 VLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFG--------HFKIWHGAG 96 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~G--------rrr~~i~~~ 96 (348)
..+-.+.+++......+...|+|.|++|+ |.+-.+.|++.++..+...+...+.|.++||.- +||.+-..+
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~ 339 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIA 339 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHH
Confidence 34555677888888888899999999998 999999999999999999999999999999753 344443334
Q ss_pred HHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHH
Q 018940 97 SVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVAN 176 (348)
Q Consensus 97 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~ 176 (348)
....++.+..+- ..+ ........+.+.+.....+...+....+ ..+. .|+.-+.+.+..+....+++
T Consensus 340 ~~~~ai~l~~l~--~~~-----~~~~~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~--apq~a~~l~g~~~~~~~~~~ 406 (466)
T KOG2532|consen 340 FGGPAVFLLVLA--FTS-----DEHRLLAVILLTIAIGLSGFNISGFYKN----HQDI--APQHAGFVMGIINFVGALAG 406 (466)
T ss_pred HHHHHHHHHeee--ecC-----CCcchHHHHHHHHHHHHcccchhhhHhh----hhhc--cchHHHHHHHHHHHHHHHHH
Confidence 444444333221 122 1122222222221111111111111111 1111 23444566666665555555
Q ss_pred HHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 018940 177 LSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRT 224 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~ 224 (348)
+++ +.+++.+.. + +...+|++.|.+.+.+.++..++..++-
T Consensus 407 ~~~----P~~vg~~~~-~--~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 407 FIA----PLLVGIIVT-D--NTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHH----HHheeeEeC-C--CCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 543 333343332 1 2467899999998888777775555443
No 213
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.31 E-value=2.4e-06 Score=80.39 Aligned_cols=124 Identities=19% Similarity=0.102 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccC
Q 018940 40 AACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILS 118 (348)
Q Consensus 40 ~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~ 118 (348)
...+..+++.|+++. |.++.+.|.+..+..+...++.++.|+++||+||||.+. .+....+.+...+.. .. ..
T Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-~~~~~~~~~~~~~~~--~~---~~ 314 (366)
T TIGR00886 241 FLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLL-MSFLGVAMGAFLVVL--GL---VS 314 (366)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHH-HHHHHHHHHHHHHHh--cC---CC
Confidence 345567888899886 999999999999999999999999999999999988754 344444444332221 01 00
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHH
Q 018940 119 TSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVA 175 (348)
Q Consensus 119 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig 175 (348)
..+......... +...+.+....+..+..++..+ ++|+...++.+...++|
T Consensus 315 ~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 315 PLSLAVFIVLFV----ALFFFSGAGNGSTFALVPHIFR--RATGAVSGLVGAIGNLG 365 (366)
T ss_pred cchHHHHHHHHH----HHHHHhccccchhhhcchhhch--hhcccHHHHHHHhccCC
Confidence 002221111111 2333344444445567777663 57888888766655443
No 214
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.28 E-value=7.6e-05 Score=66.70 Aligned_cols=129 Identities=19% Similarity=0.234 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
.+..|-+...++.|+|.+|+..+.....+...+ .++.|.+.||+|+|.. +..|+....++...++. +.... .+..+
T Consensus 20 ~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~-l~iG~~~~~~GY~~~~l-~~~~~-i~~~~ 95 (250)
T PF06813_consen 20 TFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVV-LLIGAVLGFVGYGLLWL-AVSGR-IPSLP 95 (250)
T ss_pred chhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHH-HHHHHHHHHHHHHHHHH-HHhCc-cCccc
Confidence 344555555555699999999999999999886 6999999999998765 56788888888766553 11111 01112
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~ 180 (348)
. +....+. .+.+.+.+..+.+. +...+..-|++||.+.++......+++.+-.
T Consensus 96 ~-~~~~~~~---~l~~~s~~~~~ta~--lvt~~~NFP~~RG~vvgilk~~~GLSaai~t 148 (250)
T PF06813_consen 96 V-WLMCLFL---FLGGNSSCWFNTAS--LVTCVRNFPRSRGTVVGILKGFFGLSAAIFT 148 (250)
T ss_pred h-HHHHHHH---HHHcccHHHhhhHH--HHHHHHhCccccCceehhhhHHHHhHHHHHH
Confidence 2 2322222 12333333333332 2222222357899999988887777766543
No 215
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.27 E-value=8.8e-05 Score=71.72 Aligned_cols=147 Identities=17% Similarity=0.133 Sum_probs=101.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 32 GHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 32 g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
..+..........+...+|.+.. |-+................++.+++.++++|+||||.+. .+.++.+++...++.
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~-~~~~~~~i~~~~~~f- 321 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL-IGLLLLAVGYLLLYF- 321 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH-HHHHHHHHHHHHHHh-
Confidence 34444444455556666666665 888888888888888888888999999999999999986 577777777766653
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCccc------c-hhHHHHHHHHHHHHHHHHHHHH
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTS------R-VVLTSCRNAFTMVANLSLYAIA 183 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~------R-~~~~~~~~~~~~ig~~~~~~~~ 183 (348)
+| ..+....++ ...+.+++.+..+.-..++++|... ++| | |...+......-+|..+++++.
T Consensus 322 -~~-----~~~~~l~~~----~~~i~~~g~~~~~~l~wam~~d~vD-yge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 322 -TP-----AGSVVLIVV----ALIIAGVGTGIANPLPWAMVADTVD-YGEWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred -hc-----CcchHHHHH----HHHHHHHHhhccccccHHHhcchhh-HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 34 123332211 1236678888877778899998763 222 2 3455666677777888888887
Q ss_pred HHHHHhcc
Q 018940 184 FIVFSVST 191 (348)
Q Consensus 184 ~~~~~~~~ 191 (348)
++.++..+
T Consensus 391 g~~L~~~G 398 (467)
T COG2211 391 GWILGAIG 398 (467)
T ss_pred HHHHHHcC
Confidence 78877654
No 216
>PRK11462 putative transporter; Provisional
Probab=98.19 E-value=0.00063 Score=66.68 Aligned_cols=136 Identities=10% Similarity=0.023 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc
Q 018940 41 ACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (348)
Q Consensus 41 ~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~ 119 (348)
........+|.+.. |.+ ...+.++.+..+..+++.+++++++||+|||+.+...............+ .| .
T Consensus 245 ~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~---~~-----~ 315 (460)
T PRK11462 245 CVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFF---VP-----M 315 (460)
T ss_pred HHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH---hc-----h
Confidence 33344444555554 443 34566777888888899999999999999988754322222222222222 22 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCc-----ccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018940 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNS-----TSR-VVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (348)
Q Consensus 120 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~R-~~~~~~~~~~~~ig~~~~~~~~~~~~~~ 189 (348)
.+.....+ . ..+.+++.+.......++++|..... ++| +...+.......+|..+++.+.+.+++.
T Consensus 316 ~~~~~~~~-~---~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 316 QASITMFV-F---IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred hHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12111111 1 12345555555555567777765311 122 2334555667788888888877777764
No 217
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.17 E-value=0.00049 Score=65.84 Aligned_cols=170 Identities=11% Similarity=0.028 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHHHhh----CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 35 LNDITAACWFTYLLLFLTDI----GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 35 ~~~~~~~~~~~~l~~~~~~~----g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
+....+.+.....+.|+++. +.++...|.+.++..+..++.-.+..++.+|+|.|+.+++. ...+++=......
T Consensus 231 g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Llla-g~i~~iRi~~~~~- 308 (412)
T PF01306_consen 231 GVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLA-GVIMAIRIIGSGF- 308 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHH-HHHHHHHHHHHhh-
Confidence 33344455555667777764 45677899999999999999999999999999999887654 3444443332221
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHH-HHHHHHHHHHHHHHHHHHHHh
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCR-NAFTMVANLSLYAIAFIVFSV 189 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~-~~~~~ig~~~~~~~~~~~~~~ 189 (348)
. .+.++.... -.+-++-++...++..-++.+.. |++......... +...++|..+.+...+.+.
T Consensus 309 -~-------~~~~~i~~~----klLH~~e~~l~lva~fkYI~~~f-d~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ly-- 373 (412)
T PF01306_consen 309 -A-------TNPWVISLI----KLLHALEFPLLLVAAFKYITAHF-DKRLSATLYLVGFQFAKQIGIIILSPLAGYLY-- 373 (412)
T ss_dssp ----------SHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHS--GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHH--
T ss_pred -h-------cchHHHHHH----HHHHHHHHHHHHHHHHHHHHHhC-CHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhH--
Confidence 1 233322221 13555666666666666676654 222222332221 2333444444433333332
Q ss_pred ccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 018940 190 STAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 229 (348)
Q Consensus 190 ~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~ 229 (348)
+..|++.++.+.+.+.++..++.++..+++++
T Consensus 374 --------d~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 374 --------DRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred --------hhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 36788888888888888888888888776443
No 218
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.11 E-value=0.0043 Score=59.27 Aligned_cols=127 Identities=11% Similarity=0.038 Sum_probs=77.0
Q ss_pred HHHHHHHHhh--CCChhHHH-HHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 45 TYLLLFLTDI--GLSPRGAA-AVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 45 ~~l~~~~~~~--g~s~~~~g-~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
+|+.+|+.+. |++..|+- -+.-+..=.....-.+...+.|..|-| |.++.+++...+...++.+ . .+
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-pviil~~~~~i~t~~lll~---~------~s 93 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-PVIILQALSYIITWLLLLF---G------TS 93 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHH---H------Cc
Confidence 8999999874 89988885 455555556666778999999988765 6566666665555443322 1 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
....-+.- +..|++. +..+++.+++=... ++++--++.+...+...+|..+++.++..++
T Consensus 94 v~~mq~~q----~~yg~~~-a~evay~sYiys~v-~~~~yq~vts~~raa~l~g~~~s~~lgQllv 153 (412)
T PF01770_consen 94 VLAMQLMQ----FFYGLAT-AAEVAYYSYIYSVV-DKEHYQKVTSYTRAATLVGRFISSLLGQLLV 153 (412)
T ss_pred HHHHHHHH----HHHHHHH-HHHHHHHHHheeec-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22221111 1233322 34566666665444 3444456777777777777777777665444
No 219
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.10 E-value=0.00026 Score=67.01 Aligned_cols=131 Identities=11% Similarity=0.102 Sum_probs=91.7
Q ss_pred HHHHHHHHHh-hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccc
Q 018940 44 FTYLLLFLTD-IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTL 122 (348)
Q Consensus 44 ~~~l~~~~~~-~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 122 (348)
...-..|-.+ .|++.+++.++.....+..+++..+.|++.||+|.|+.++ .+.+...+.....++ . ..
T Consensus 272 l~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~-~~lvi~~~~~~~~~~---~------~~- 340 (438)
T COG2270 272 LAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLM-IGLVILSIAALYLIF---L------EG- 340 (438)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeh-HHHHHHHHHHHHHHH---c------cc-
Confidence 3555567664 5999999999999999999999999999999999987654 454444444433321 1 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018940 123 KVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV 189 (348)
Q Consensus 123 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~ 189 (348)
...+..+ ..+++...+..+...-++.+++.| +++-++..++++..+-.+...+++..+.+.+.
T Consensus 341 ~~~f~i~---gll~g~s~G~~qA~SRSy~~~lvp-~~k~~~fFglyaltgra~S~~gp~lv~v~t~i 403 (438)
T COG2270 341 ELDFWIL---GLLVGTSLGGAQASSRSYLARLVP-KGKEGRFFGLYALTGRAASFLGPFLVAVITQI 403 (438)
T ss_pred cHHHHHH---HHHHHHhcchHHHHHHHHHHHhCC-CccccceeehhhhhhhHHHHHHHHHHHHHHHH
Confidence 1122222 236778888888888899999986 45667888888888777777766655444433
No 220
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.09 E-value=0.00046 Score=65.82 Aligned_cols=128 Identities=13% Similarity=0.019 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 42 CWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 42 ~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
....+.+.++++. |.++.+.|++.....+...++.++.+++.||+||+.. .. .....+.....+. +.. ....
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~---~~~-~~~~ 297 (394)
T PRK11652 225 VFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW-QS--VICCLLAGLLMWI---PGW-FGVM 297 (394)
T ss_pred HHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHH---HHH-hccc
Confidence 3345567788885 9999999999888888888899999999999984332 22 1111222111110 100 0001
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHH
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~ 182 (348)
+.... .+...+.+.+.+...+...+...+.. +++++...+..+...++|+.+++.+
T Consensus 298 ~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~lg~~~~~~~ 353 (394)
T PRK11652 298 NVWTL----LVPAALFFFGAGMLFPLATSGAMEPF--PYLAGTAGALLGGLQNIGSGLAALL 353 (394)
T ss_pred cHHHH----HHHHHHHHHHHHHHHHHHHHHHHhhc--cccchHHHHHHHHHHHHHHHHHHHH
Confidence 11111 11112455666666666666666654 3578888888877777777665543
No 221
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.05 E-value=1e-05 Score=72.41 Aligned_cols=265 Identities=9% Similarity=0.038 Sum_probs=133.2
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc-cCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHH
Q 018940 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFA 133 (348)
Q Consensus 55 g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr-~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 133 (348)
+++.++.-++.+++.....+...+.|++.|| +|-|.--++. +....++- +.|. .. ...-.+....+..
T Consensus 75 ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~-~~fv~~Gq-liFa--~G-------gi~~aFw~M~~GR 143 (459)
T KOG4686|consen 75 NIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIIL-CIFVFLGQ-LIFA--AG-------GISHAFWTMLAGR 143 (459)
T ss_pred ccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHH-HHHHHHHH-HHHH--hc-------hHHHHHHHHHhhh
Confidence 6777788999999999999999999999996 6665332222 22222222 1231 11 1111111222223
Q ss_pred HHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHh----ccCCcccchhhHHHHHH-HH
Q 018940 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV----STAKTHADLENQYRWIA-YS 208 (348)
Q Consensus 134 ~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~-~i 208 (348)
+++|+|.-...+..+.++....+ -||-..+.++.....-+|..+--.+.+++... +++. +....|-...+ ..
T Consensus 144 F~FGIGgESlAVaQN~yav~wFK-GKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~--ghT~LG~~l~~~~~ 220 (459)
T KOG4686|consen 144 FLFGIGGESLAVAQNKYAVYWFK-GKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGV--GHTLLGLWLCFEVK 220 (459)
T ss_pred eeeccCchhhhhhhcceeEEEec-CccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccc--hHHHHHHHHHHHHH
Confidence 46776655666777777777665 36677777777666666654433333444332 2211 01112211111 11
Q ss_pred HHHHHHHHHHHHHhhcccccc---ccccc-CCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccccc
Q 018940 209 SIFIGCCFVGIFLSRTEEPRL---KMGLR-GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMG 284 (348)
Q Consensus 209 ~~~i~~~~~ll~~~~~~e~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~ 284 (348)
.....++++ +..-+.+++.. ..++. ..+.+|..-...++ |++|.+.++-++...+..-+.+.-|.++++..|++
T Consensus 221 tc~~slica-l~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~-ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS 298 (459)
T KOG4686|consen 221 TCKQSLICA-LSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFY-PPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLS 298 (459)
T ss_pred HHHHHHHHH-HHhhhhhhHHHHHHhhhcCcccCCcccccccccC-ccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCC
Confidence 112222222 22223333211 11110 01111111112233 45565433333333333334445567889999999
Q ss_pred chhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHH-HHHHHHHHHHHHHhHhhc
Q 018940 285 QSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAY-YSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 285 ~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~-~~~g~~l~~v~~~~~~~~ 337 (348)
+.+++.+....+.-+...+++.+.+ ||.|++ .. +..+.+....+...++|-
T Consensus 299 ~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n--~~wv~~a~~~tl~~H~~l~Ft 351 (459)
T KOG4686|consen 299 AVSAGNILSTVYGISAVLSPVFGAISDKYGFN--LWWVASACILTLLGHSGLFFT 351 (459)
T ss_pred hhhccchhhhhhhhhhhhhhhHHHhHhhhcce--ehhHHHHHHHHHHHhhhHHhh
Confidence 8765544444444555566666766 999999 54 344455566666555554
No 222
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.02 E-value=0.00087 Score=64.90 Aligned_cols=258 Identities=10% Similarity=-0.032 Sum_probs=131.4
Q ss_pred HHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHH
Q 018940 65 MLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQ 144 (348)
Q Consensus 65 ~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 144 (348)
.++-.....+...+.+.+.|+.|.|..+. .++.....-....+. | +.+. +.+...+.|+|.+..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv-~ga~~y~~f~~gfl~---~------N~y~-----~yfssallG~Gaallw 120 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALV-IGATCYAAFPLGFLF---P------NSYY-----LYFSSALLGFGAALLW 120 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHH-HHhHHHHHHHHHHHh---c------chHH-----HHHHHHHhhhhHHhee
Confidence 66667777888999999999999987754 455444433322221 2 1111 1223357888888888
Q ss_pred HhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHH--------H---HHHHHHHHH
Q 018940 145 VAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYR--------W---IAYSSIFIG 213 (348)
Q Consensus 145 ~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~--------~---~~~i~~~i~ 213 (348)
..+...+.+..+ ++.+.+..++.......+.+++++.. ..+......+ +....+.+ . ...+++++.
T Consensus 121 ~GqG~ylt~~st-~~tie~Nisi~Wai~~~~li~Ggi~l-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~v~~ 197 (461)
T KOG3098|consen 121 TGQGGYLTSNST-RETIERNISIFWAIGQSSLIIGGIIL-FIYFQFSSSS-AIITDGTRRLVFEVLFIDFEIKVLFGVLL 197 (461)
T ss_pred cccceehhhcCC-hhhHHHHHHHHHHHHHHHHHhhhHhh-eeeeEecccc-cccccchhhhhcchhhhhHHHHHHHHHHH
Confidence 888888888764 56677888877777777777665542 1111111100 00011111 0 111111111
Q ss_pred HHHH--HHHHhhcccccccccccCC-chhHHHHHH---HHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccch-
Q 018940 214 CCFV--GIFLSRTEEPRLKMGLRGN-SHARISWAY---WFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS- 286 (348)
Q Consensus 214 ~~~~--ll~~~~~~e~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~- 286 (348)
.... .+.....|.++...++++. +..++.+|. ++++|+...+...++....-.......+|+.+.-.......
T Consensus 198 ~~~~l~~i~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~ 277 (461)
T KOG3098|consen 198 AISVLSIINFDFLPSKDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNT 277 (461)
T ss_pred HHHHHHhhheeecCccchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcc
Confidence 1111 1111122221111111111 233344333 45567766666665555555556666777776554333222
Q ss_pred --hhhHHhHHHHHHHHHHHHHHHHH----HHhhhhhhHHHHHHHHHHHHHHHhHhhc-cCCce
Q 018940 287 --AKALVPAIIYICSFIVSILLQEM----AWTGQRLKAYYSAGGVLWVFCGAGILIL-PMNMS 342 (348)
Q Consensus 287 --~~~~~~~~~~~~~i~g~~~~~~l----~r~g~r~k~~~~~g~~l~~v~~~~~~~~-~~~~~ 342 (348)
..++.....+++.+++.+..+.+ +|+|++ +.+.++..+-.+++++...- |.+.|
T Consensus 278 ~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~~~~~~~~~~~li~l~~p~dap 338 (461)
T KOG3098|consen 278 TYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLIGIIIHLIGFLLIHLSFPNDAP 338 (461)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhHHHHHHHHHHHHHhccccccCC
Confidence 22334444455556655555544 445555 77777766665555444433 55554
No 223
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.99 E-value=0.019 Score=55.61 Aligned_cols=56 Identities=5% Similarity=-0.073 Sum_probs=41.6
Q ss_pred hhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHH
Q 018940 269 SQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLW 327 (348)
Q Consensus 269 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~ 327 (348)
+....-.|+..+ |++....+.+=....+.++.|..+.|++ +|+|.. |+=.+++...
T Consensus 277 f~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlv--r~G~~~l~~q 333 (432)
T PF06963_consen 277 FGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLV--RAGLWSLWWQ 333 (432)
T ss_pred CcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--hhHHHHHHHH
Confidence 455566777777 9998877766666667788899999998 999988 6655555543
No 224
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.91 E-value=0.0002 Score=70.88 Aligned_cols=173 Identities=14% Similarity=0.099 Sum_probs=107.2
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH
Q 018940 26 VLYYGSGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~ 105 (348)
...++++...+.+.......+++.|..+.|.+..+++.++++..+.+.++-++.|+++|+...++.++...+++ ..+..
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll-~~gl~ 378 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLL-IAGLA 378 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHH-HHHHH
Confidence 35666776666676677778888888877999999999999999999999999999999987555544322222 22222
Q ss_pred HHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 018940 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFI 185 (348)
Q Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~ 185 (348)
.++. |. ..++. ..+.+. .++|...+....-..-.+.++.. .++-..+.++......++.+++ +|
T Consensus 379 ~~~~---p~----~~~~~-~l~~~~---~~fG~~~g~~~~l~~~i~~~~~g-~~~l~~a~Gl~l~~~gi~~l~g----pP 442 (509)
T KOG2504|consen 379 RLFL---PF----ATTYV-GLIVFS---ILFGFCVGSFSSLTPVILVDLVG-LEKLSNAYGLLLLFQGIGALVG----PP 442 (509)
T ss_pred HHHH---HH----hccHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHHcC-hhhcchHHHHHHHHhHHHHHcC----cc
Confidence 2332 31 12332 222232 24555555444333345556653 4455677787777777766664 45
Q ss_pred HHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHH
Q 018940 186 VFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIF 220 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~ 220 (348)
+.+.+-+ ....|...++.+++..++..++.
T Consensus 443 iag~~~d-----~tg~Y~~~f~~~g~~~~~s~~~~ 472 (509)
T KOG2504|consen 443 IAGLLYD-----ITGNYDHAFYFCGLCFLLSAVLL 472 (509)
T ss_pred cceeeee-----ccCCeeeehhhcChHHHHHHHHH
Confidence 4443321 12237777887776666555444
No 225
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.87 E-value=9.8e-05 Score=72.55 Aligned_cols=83 Identities=17% Similarity=0.152 Sum_probs=66.2
Q ss_pred HhhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc----cCCchHHHHHHHHH
Q 018940 25 SVLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR----FGHFKIWHGAGSVL 99 (348)
Q Consensus 25 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr----~Grrr~~i~~~~~~ 99 (348)
....|++..+......+....++|.|+++. |.|..+.+.+.....+..+++.+++|.++|| +.+|..+.....+.
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 467788888888888888889999999995 8999999999999999999999999999999 66665555444445
Q ss_pred HHHHHHHH
Q 018940 100 VAVSFSSV 107 (348)
Q Consensus 100 ~~i~~~~l 107 (348)
..++...+
T Consensus 354 ~~~g~~~l 361 (495)
T KOG2533|consen 354 AIIGAISL 361 (495)
T ss_pred HHHHHHHH
Confidence 44553433
No 226
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.87 E-value=0.0008 Score=66.22 Aligned_cols=164 Identities=8% Similarity=-0.118 Sum_probs=97.1
Q ss_pred HHHHHHHHHhh-CCC----hhHHHHHHHHHHHHHHhhhhhhH----hhhcc-cCCchHH-HHHHHHHHHHHHHHHhcC--
Q 018940 44 FTYLLLFLTDI-GLS----PRGAAAVMLSGQIADGFATIFIG----ELIDR-FGHFKIW-HGAGSVLVAVSFSSVFGG-- 110 (348)
Q Consensus 44 ~~~l~~~~~~~-g~s----~~~~g~i~~~~~i~~~i~~p~~G----~l~Dr-~Grrr~~-i~~~~~~~~i~~~~l~~~-- 110 (348)
.+.++.|.++. +.+ ....+++.++..+...+.+|+.. ++.|| .+++.+. +..|.++.++++..+...
T Consensus 292 ~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~ 371 (475)
T TIGR00924 292 PTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIW 371 (475)
T ss_pred hhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45566666553 332 22377889999999999999866 45555 2223222 145666666665433200
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVS 190 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~ 190 (348)
.... ....+.++....+. +.++|.....+...+++.+.+| ++.|+++.+.......+|..+++.+.....
T Consensus 372 ~~~~--~~~~s~~~~i~~~~----~~~~ge~~~~p~~~~~~~~~aP-~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~--- 441 (475)
T TIGR00924 372 FADA--GGLTSPWFMVLIYL----FQTLGELMISPLGLSWWTKIAP-QRLMGQMLGMWFLAQAMGSLLGGYLATFGA--- 441 (475)
T ss_pred hcCC--CCccCHHHHHHHHH----HHHHHHHHHhHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 0000 00134454444443 6778888888888899999885 678999999998888888887766543221
Q ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 018940 191 TAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRT 224 (348)
Q Consensus 191 ~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~ 224 (348)
...+|.+.+...+++.++..++.++..
T Consensus 442 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 442 -------VPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred -------cccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 122455555555555555455444433
No 227
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.72 E-value=0.00038 Score=50.38 Aligned_cols=66 Identities=18% Similarity=0.276 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHH
Q 018940 255 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAG 323 (348)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g 323 (348)
+-..+++...+.....+|+|.|+.+ .|++..+.+++..+..+..++++++.+.+ ||.+|+ +.+..+
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~--~~~l~~ 71 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR--KVILLG 71 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc--HHHHHH
Confidence 4456667777888899999999996 79999998888888888899999999998 999999 544443
No 228
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.71 E-value=0.0008 Score=66.12 Aligned_cols=131 Identities=8% Similarity=-0.030 Sum_probs=89.7
Q ss_pred hCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc--ccchhHHHHHHH
Q 018940 54 IGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST--STLKVETISYCV 131 (348)
Q Consensus 54 ~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~--~~~~~~~~~~~l 131 (348)
.|.|+.+.|.+..+..+..+++....+++.+|++.|+.+. .+.+..+++...... ... .+... .+..+....
T Consensus 283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~-~~~~l~~~~~~~~~~-l~~-~~~~~~gi~~~~~~~~--- 356 (468)
T TIGR00788 283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFG-VTTLLYTLSSLFDLI-LVK-RWNLAFGISDEVFVLG--- 356 (468)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHH-HHHHHHHHHHhCcee-eee-ccccccCCCCeeeeee---
Confidence 3999999999999999999999999999999999887754 555555554421100 000 00000 011111111
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 018940 132 FAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVST 191 (348)
Q Consensus 132 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~ 191 (348)
...+.+++++....|...++.+..+ +++++...++.+...++|..+++.+++.+...++
T Consensus 357 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 357 DSIIAEVLAQLKFMPFLVLLARLCP-SGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred hhHHHHHHHHHHHccHHHHHHHhCC-CCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1125667777888888899999885 6788999888888889998888877777766654
No 229
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.68 E-value=0.00026 Score=69.70 Aligned_cols=84 Identities=15% Similarity=0.135 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHh-hhhhhHHHHHHHHHH
Q 018940 250 ILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWT-GQRLKAYYSAGGVLW 327 (348)
Q Consensus 250 ~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~-g~r~k~~~~~g~~l~ 327 (348)
|.++.+........+.+++...++|.|+++.+|++..+.+...........++.++.|++ ||+ ||| |++.+|.++.
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr--r~iliG~il~ 86 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR--MAVMLGALLM 86 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH--HHHHHHHHHH
Confidence 345555666677778899999999999999999988776666565666777888899998 998 999 9999999998
Q ss_pred HHHHHhHh
Q 018940 328 VFCGAGIL 335 (348)
Q Consensus 328 ~v~~~~~~ 335 (348)
+++++.+.
T Consensus 87 ~lg~lll~ 94 (493)
T PRK15462 87 AIGHVVLG 94 (493)
T ss_pred HHHHHHHH
Confidence 88876554
No 230
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.64 E-value=0.0036 Score=62.05 Aligned_cols=157 Identities=11% Similarity=-0.038 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHhhhhhh----HhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCccc--CcccchhHHHHHHHHHH
Q 018940 61 AAAVMLSGQIADGFATIFI----GELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRIL--STSTLKVETISYCVFAA 134 (348)
Q Consensus 61 ~g~i~~~~~i~~~i~~p~~----G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~--~~~~~~~~~~~~~l~~~ 134 (348)
.+++.++..+...+.+|+. +++.||.+.++. +..|..+.++++..+.. .+.... ...+.++....+ .
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~-~~~G~~l~~l~f~~l~~--~~~~~~~~~~vs~~~~~~~~----~ 390 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHK-FAIGMVLCSGAFLVLPL--GAKFANDAGIVSVNWLIASY----G 390 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHH-HHHHHHHHHHHHHHHHH--HHHhcCCCCccCHHHHHHHH----H
Confidence 5667777887777888887 555555554444 34577777777654321 010000 011223343333 3
Q ss_pred HHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHH
Q 018940 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (348)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~ 214 (348)
+.++|.....+...+++.+.+| ++.|++..+.......+|+.+++.+....-......+......++.+.+...+++.+
T Consensus 391 l~~~ge~~~~p~g~s~~~~~aP-~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 469 (500)
T PRK09584 391 LQSIGELMISGLGLAMVAQLVP-QRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATA 469 (500)
T ss_pred HHHHHHHHHhHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHH
Confidence 6778888888888888888885 678999999887776677666554432100000000000011246677776666665
Q ss_pred HHHHHHHhhcc
Q 018940 215 CFVGIFLSRTE 225 (348)
Q Consensus 215 ~~~ll~~~~~~ 225 (348)
+.+++.+...|
T Consensus 470 ~~a~~~~~~~~ 480 (500)
T PRK09584 470 VIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHH
Confidence 55555444333
No 231
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.60 E-value=0.088 Score=51.87 Aligned_cols=167 Identities=11% Similarity=0.037 Sum_probs=85.4
Q ss_pred hHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHH----HHHHHHHHHHHHHHHH
Q 018940 146 AHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWI----AYSSIFIGCCFVGIFL 221 (348)
Q Consensus 146 ~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~i~~~i~~~~~ll~~ 221 (348)
-+++.+.|+++ .+|-.|..++...+.++|.++++.+...+........ .....+|... +.+..+.+.+...+ .
T Consensus 164 LFW~fAN~itt-~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~v~~~g~~i~~~-~ 240 (491)
T PF03219_consen 164 LFWGFANEITT-VEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSL-PAGVDAWELSLNSLMGIVLILGIVIILL-Y 240 (491)
T ss_pred HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-ccccccHhHHHHHHHHHHHHHHHHHHHH-H
Confidence 36788888874 5677788888888989988887766544433111100 0012334322 22222222222222 2
Q ss_pred hhccc-----ccc------cccccCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccch---h
Q 018940 222 SRTEE-----PRL------KMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS---A 287 (348)
Q Consensus 222 ~~~~e-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~---~ 287 (348)
.++.+ ++. +++++++.+.+|.++.++|+|+++.+++...+.+...+....-.-..+.+...-+.+ .
T Consensus 241 ~~~~~~vl~~~~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysaf 320 (491)
T PF03219_consen 241 RYMNKNVLTDPRFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAF 320 (491)
T ss_pred HHHHHHccCccccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHH
Confidence 22221 111 011123445678888999999988776665555555444433332333333222222 1
Q ss_pred hhHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 288 KALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 288 ~~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
++-+....++.+++..++.+.+ +|+|.+
T Consensus 321 mG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 321 MGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 2222333344455555667776 999988
No 232
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.56 E-value=0.0005 Score=67.95 Aligned_cols=87 Identities=10% Similarity=0.060 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HH-hhhhhhHHHHHHHHHH
Q 018940 250 ILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AW-TGQRLKAYYSAGGVLW 327 (348)
Q Consensus 250 ~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r-~g~r~k~~~~~g~~l~ 327 (348)
|.++.+.+..++..+.+++...+++.|+++++|++.++.+...........+..+++|++ || +||| |++..|.+++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r--~~~~~g~~~~ 91 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK--RTIVLGAIVL 91 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH--HHHHHHHHHH
Confidence 345556667777889999999999999999999988766544444444555556788898 99 9999 9999999999
Q ss_pred HHHHHhHhhcc
Q 018940 328 VFCGAGILILP 338 (348)
Q Consensus 328 ~v~~~~~~~~~ 338 (348)
+++++...+.+
T Consensus 92 ~~g~~~~~~~~ 102 (489)
T PRK10207 92 AIGYFMTGMSL 102 (489)
T ss_pred HHHHHHHHHhc
Confidence 99998777654
No 233
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.53 E-value=0.018 Score=51.18 Aligned_cols=153 Identities=14% Similarity=0.096 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHhhCCCh--hHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc
Q 018940 42 CWFTYLLLFLTDIGLSP--RGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST 119 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~--~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~ 119 (348)
......+.+..+.+.+. .+.++......+...+.+++.|+++||+|||+.++ .+.....++...... .+ .
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~--~~-----~ 91 (338)
T COG0477 20 LLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLI-IGLLLFLLGTLLLAL--AP-----N 91 (338)
T ss_pred hHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHH-HHHHHHHHHHHHHHh--Cc-----c
Confidence 33455556666665554 58899999999999999999999999999986654 444332333222211 11 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHH-HHHHHHHHHHHHHHHHHHhccCCcccch
Q 018940 120 STLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNA-FTMVANLSLYAIAFIVFSVSTAKTHADL 198 (348)
Q Consensus 120 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~-~~~ig~~~~~~~~~~~~~~~~~~~~~~~ 198 (348)
...... .+.....+.+.+.......+++.+..++.++|+...+.... ...+|..+++.+.+.+... .
T Consensus 92 ~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 159 (338)
T COG0477 92 VGLALL----LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA--------L 159 (338)
T ss_pred chHHHH----HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------H
Confidence 111212 11112355666666667778888876420356766666555 3444555544332222211 1
Q ss_pred hhHHHHHHHHHHHHHH
Q 018940 199 ENQYRWIAYSSIFIGC 214 (348)
Q Consensus 199 ~~g~~~~~~i~~~i~~ 214 (348)
..+|++.+.+......
T Consensus 160 ~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 160 LWGWRAAFLLAALLGL 175 (338)
T ss_pred hcchHHHHHHHHHHHH
Confidence 3578886655544443
No 234
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.49 E-value=0.00016 Score=70.16 Aligned_cols=66 Identities=17% Similarity=0.226 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHH
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV 107 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l 107 (348)
...++++.|..++|+++.+.|.+...-+++.++..|++|.++||+.|||++++.+.+......+++
T Consensus 29 ~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll 94 (618)
T KOG3762|consen 29 SLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLL 94 (618)
T ss_pred ccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhe
Confidence 345888999999999999999999999999999999999999999999998776655555554443
No 235
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.48 E-value=0.015 Score=56.14 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchH
Q 018940 41 ACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKI 91 (348)
Q Consensus 41 ~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~ 91 (348)
.....+.|.++++. |.++.+.|+..........++..+.+++.+|.+++|.
T Consensus 235 ~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 286 (413)
T PRK15403 235 MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRF 286 (413)
T ss_pred HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH
Confidence 34445678888887 9999999999877788888888899988765544443
No 236
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.37 E-value=0.023 Score=54.73 Aligned_cols=63 Identities=11% Similarity=0.127 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhh--CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 41 ACWFTYLLLFLTDI--GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 41 ~~~~~~l~~~~~~~--g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
....++++.|.++. +.+....+...+.......++..+.|++.||.++||.+.+ .....++..
T Consensus 249 ~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i-~~~~~~~~~ 313 (410)
T TIGR00885 249 IMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMA-YAIIGMALC 313 (410)
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH-HHHHHHHHH
Confidence 34568888898764 5566666666666667888999999999999999887543 444444443
No 237
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.33 E-value=0.036 Score=53.92 Aligned_cols=235 Identities=11% Similarity=0.072 Sum_probs=113.8
Q ss_pred HHHHHHhh--CCChhHHHHHHHHH-HHHHHhhhhhhHhhhc-----ccCCchHHHHHHHHHHHHHHHHHhcCcCC-----
Q 018940 47 LLLFLTDI--GLSPRGAAAVMLSG-QIADGFATIFIGELID-----RFGHFKIWHGAGSVLVAVSFSSVFGGCMP----- 113 (348)
Q Consensus 47 l~~~~~~~--g~s~~~~g~i~~~~-~i~~~i~~p~~G~l~D-----r~Grrr~~i~~~~~~~~i~~~~l~~~~~~----- 113 (348)
+|..+++. ++|-+|.|....+. +.. ...++..+.| |+||||.|++-.-.+..+.++.+-. ...
T Consensus 23 iPflL~~~~~~~sy~q~~~fSla~~PfS---lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~-~i~~~~~~ 98 (544)
T PF13000_consen 23 IPFLLQSMAKKVSYSQQAIFSLASYPFS---LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSY-NISQWLLF 98 (544)
T ss_pred chhhhccccCCCChhHheeeeeeechhH---HHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHh-ccchhhcc
Confidence 44555552 77877777653222 211 2345555555 8999999987665555555433321 120
Q ss_pred ----Cccc-Ccccch------hHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHH
Q 018940 114 ----CRIL-STSTLK------VETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (348)
Q Consensus 114 ----~~~~-~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~ 182 (348)
..+. ...+.. .+...+. ++.+..+-..++...+.-.+. ++|+++-++.....|++.|..++..+
T Consensus 99 ~~~~d~~~~~~~~~~~~~~i~~Lt~~F~----~L~fl~ATQDIAVDGWALT~L-s~~n~~~ASTcqtvG~~~Gyfls~tv 173 (544)
T PF13000_consen 99 DGVDDALLGQGESTVNNITIKFLTWFFF----ILVFLCATQDIAVDGWALTML-SPENVGYASTCQTVGQTAGYFLSFTV 173 (544)
T ss_pred cccchhhhcCCCCcccccchhHHHHHHH----HHHHHHccCCceeehhhhhhc-ChhhcchHHHHHHhHhhhhHHHHHHH
Confidence 0000 000100 0111111 122222334444445554444 46778888888888888887776544
Q ss_pred HHHHH-----HhccCCcccc----hhhHHHHHHHHHHHHHHHHHHHHHhhcccccccc-----c-----c----------
Q 018940 183 AFIVF-----SVSTAKTHAD----LENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM-----G-----L---------- 233 (348)
Q Consensus 183 ~~~~~-----~~~~~~~~~~----~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~~~-----~-----~---------- 233 (348)
...+= +......+.| .-.|| ....|.+-++......++.+|++..+ + +
T Consensus 174 Flalns~~f~Nky~r~~p~~~glvtl~~y---l~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (544)
T PF13000_consen 174 FLALNSPDFCNKYLRSTPSDEGLVTLSGY---LKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEY 250 (544)
T ss_pred HHhhCCHHHHHHhcccCCCCCCeeeHHHH---HHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccceec
Confidence 21110 0000000111 01122 12233344444444556666643110 0 0
Q ss_pred -cCC-------chhHHHH---HHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHH
Q 018940 234 -RGN-------SHARISW---AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAI 294 (348)
Q Consensus 234 -~~~-------~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 294 (348)
+++ .+.++.+ .+++|.|..+.+.+....+..++.....--..-+.|. |++++..++...+
T Consensus 251 ~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEk-G~~KE~LAl~~li 321 (544)
T PF13000_consen 251 DESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEK-GLSKEDLALLVLI 321 (544)
T ss_pred ccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHc-CCCHHHhHHHHHH
Confidence 000 0112222 3455667766677777777777777776666777764 9988877655444
No 238
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.31 E-value=0.037 Score=52.60 Aligned_cols=170 Identities=12% Similarity=-0.011 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCc
Q 018940 37 DITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCR 115 (348)
Q Consensus 37 ~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~ 115 (348)
.+..++....+=||=.++ |+|..+..-+.........++-...|++..|..+++.+...|+...++++..+.. .-+
T Consensus 221 t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~-a~~-- 297 (403)
T PF03209_consen 221 TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIIL-AGP-- 297 (403)
T ss_pred HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH-HHh--
Confidence 333344455566676777 9999888888888888888888889999985433344566788888887754331 001
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018940 116 ILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTH 195 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~ 195 (348)
..+.+ . +.....++|++.+.+.+..-+.+.+++. +++.+...+.+...+.++..++...++.+.+.......
T Consensus 298 ---~~~~~-~---~~~~~~l~G~g~G~f~vgals~mM~lt~-~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~ 369 (403)
T PF03209_consen 298 ---LGSPW-L---FRPGVFLLGLGNGLFTVGALSLMMDLTS-AGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFG 369 (403)
T ss_pred ---cccch-H---HHHHHHHHHHhhhHHHHHHHHHHHhCCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11222 2 1222247888888888888888888884 45667777777777777776766666665543211000
Q ss_pred cchhhHHHHHHHHHHHHHHHHH
Q 018940 196 ADLENQYRWIAYSSIFIGCCFV 217 (348)
Q Consensus 196 ~~~~~g~~~~~~i~~~i~~~~~ 217 (348)
.++..+|...|.+=++..++..
T Consensus 370 ~~~~~aY~~VF~lEa~ll~~a~ 391 (403)
T PF03209_consen 370 NSPALAYGVVFALEAVLLLAAL 391 (403)
T ss_pred CCcchHHHHHHHHHHHHHHHHH
Confidence 1245678877766544444333
No 239
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.26 E-value=0.0016 Score=61.19 Aligned_cols=157 Identities=12% Similarity=0.114 Sum_probs=81.9
Q ss_pred HHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccch
Q 018940 45 TYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLK 123 (348)
Q Consensus 45 ~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 123 (348)
+-++.+..|. ..+..+.|+...-..+.+.++.+++|.++||+++-| |.....-+..++ .... ++|. .++..
T Consensus 291 Ptlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~-wl~~~~gl~~~G-~~~~--~iP~----~~~~~ 362 (464)
T KOG3764|consen 291 PTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR-WLLSLGGLATVG-VSSG--PIPF----ATSIA 362 (464)
T ss_pred cccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh-HHHHHHHHHHHH-HHhc--hhHh----hhhHH
Confidence 4445555554 767779999999999999999999999999999654 332211111222 1111 2341 12222
Q ss_pred hHHHHHHHHHHHHHHHHHHHH---HhHhhhhhhcccCc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccch
Q 018940 124 VETISYCVFAAIFNVGWAATQ---VAHMSMVNCITLNS--TSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADL 198 (348)
Q Consensus 124 ~~~~~~~l~~~~~~~~~~~~~---~~~~a~~~~~~~~~--~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~ 198 (348)
.+.+-. ...+++.+... .|...+.-|...+. +--+...++......+|..+++.+++.++ .
T Consensus 363 ~L~vp~----~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv----------~ 428 (464)
T KOG3764|consen 363 QLWVPN----FGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLV----------E 428 (464)
T ss_pred HHhhhh----HHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhe----------e
Confidence 221111 12233333322 23333333322111 01234555555555555555433322221 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh
Q 018940 199 ENQYRWIAYSSIFIGCCFVGIFLSR 223 (348)
Q Consensus 199 ~~g~~~~~~i~~~i~~~~~ll~~~~ 223 (348)
..||.|...+.++.-++..-++.++
T Consensus 429 ~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 429 AIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789998888877777666555443
No 240
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.24 E-value=0.0024 Score=63.52 Aligned_cols=169 Identities=14% Similarity=-0.002 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc-
Q 018940 41 ACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST- 119 (348)
Q Consensus 41 ~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~- 119 (348)
..+..|.+.++++.|.+... .....+..+...++..+.+.+.||+|||+.+ +.+...++++...+.. ... ....
T Consensus 312 ~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll-l~s~~~m~~~~~~~~~--~~~-~~~~~ 386 (513)
T KOG0254|consen 312 NYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL-LFGAAGMSICLVILAV--VGV-FALYY 386 (513)
T ss_pred ceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHhHHHHHHHHHHHHH--HHH-HhccC
Confidence 34446666777666555332 3344445555666666779999999998764 5777777777654321 000 0000
Q ss_pred ----ccchhHHHHHHHHHHHHHHHHHHHHHhHh-hhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 018940 120 ----STLKVETISYCVFAAIFNVGWAATQVAHM-SMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT 194 (348)
Q Consensus 120 ----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~ 194 (348)
....+..+... .++-..++....|.. .+.+|+.| .+-|++..++........+.............
T Consensus 387 ~~~~~~~~~~~~~~~---~~~v~~f~~g~g~v~w~~~sEifp-~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~----- 457 (513)
T KOG0254|consen 387 PNSSKGAGWLAIVFL---CLFIFSFAIGWGPVPWVIVSEIFP-LRLRSKGASLAVAVNWLWNFLISFFFPFITEA----- 457 (513)
T ss_pred CCcccchhHHHHHHH---HHHHHHHhcccccchhhhhhccCc-HhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 01111111111 122222332222222 35577764 56777777776666555554433332222211
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHH-HHHhhccccc
Q 018940 195 HADLENQYRWIAYSSIFIGCCFVG-IFLSRTEEPR 228 (348)
Q Consensus 195 ~~~~~~g~~~~~~i~~~i~~~~~l-l~~~~~~e~~ 228 (348)
.++...+..++.+..+... ..++.+||.+
T Consensus 458 -----~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 458 -----LGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred -----ccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 1123344555455555555 5677788854
No 241
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.20 E-value=0.044 Score=53.85 Aligned_cols=153 Identities=11% Similarity=0.032 Sum_probs=88.8
Q ss_pred HHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc-----------ccchhHHHHHHHHH
Q 018940 65 MLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST-----------STLKVETISYCVFA 133 (348)
Q Consensus 65 ~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~-----------~~~~~~~~~~~l~~ 133 (348)
.....+...+.+.+.-++++|+|+||.+-..+.++.++++...+. +.. ..+. .+.........+..
T Consensus 311 l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~--i~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (477)
T TIGR01301 311 LMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVL--VTY-VAKNSRYYDGDGESLPPPTGIKASALIVF 387 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH--HHh-hhhccccccccccccCcchhhHHHHHHHH
Confidence 444455555667777888889996444334565666666543321 110 0000 00100001112222
Q ss_pred HHHHHHHHHHHHhHhhhhhhcccC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHH
Q 018940 134 AIFNVGWAATQVAHMSMVNCITLN-STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFI 212 (348)
Q Consensus 134 ~~~~~~~~~~~~~~~a~~~~~~~~-~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i 212 (348)
...|+.++..+.--.+++++..++ .++.|...++.|....+.+++.+...+++...+++ +-.+.+.+.++.
T Consensus 388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~--------~~~~~~~~~gv~ 459 (477)
T TIGR01301 388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG--------GNLPAFVVGAVA 459 (477)
T ss_pred HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC--------CCeeHHHHHHHH
Confidence 367777775544334567666543 23448899999999999999988877786666553 123345666777
Q ss_pred HHHHHHHHHhhccccc
Q 018940 213 GCCFVGIFLSRTEEPR 228 (348)
Q Consensus 213 ~~~~~ll~~~~~~e~~ 228 (348)
.++.++..++.+|+++
T Consensus 460 ~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 460 AFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHhCCCCC
Confidence 7777888888887753
No 242
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.92 E-value=0.0051 Score=54.75 Aligned_cols=175 Identities=11% Similarity=0.079 Sum_probs=84.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccc--cccccc--
Q 018940 159 TSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR--LKMGLR-- 234 (348)
Q Consensus 159 ~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~--~~~~~~-- 234 (348)
++|+..+.+-..+.++|.+++... .+... .. .......|++.+.+.+++.++..++...+-+|-+ .+++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ip--F~~~~-~~--~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIP--FLISS-SV--VIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEK 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhh--HHhcc-hH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccccc
Confidence 567777777777888888775532 22210 00 0012456999888877766665555544433311 111111
Q ss_pred --CCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---hcc--ccc----c----hhhhHHhHHHHHHH
Q 018940 235 --GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVI---NDL--RMG----Q----SAKALVPAIIYICS 299 (348)
Q Consensus 235 --~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~---~~~--~~~----~----~~~~~~~~~~~~~~ 299 (348)
.+.+.++..++.+|+|+-|...+.+...-. ..+.++-+.+.. +.- +.+ . ....+...+...+.
T Consensus 77 ~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv--~~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~ 154 (267)
T PF07672_consen 77 ENSTLSKKPSYKSILKEKETWKWILIYGIWLV--VVVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGY 154 (267)
T ss_pred ccccccccchHHHHHccchHHHHHHHHHHHhe--eEEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHH
Confidence 112234567889999987765444432211 111111112221 111 110 1 11223333333444
Q ss_pred HHHHHHHHHHHHhhhhhhHH----HHHHHHHHHHHHHhHhhccCC
Q 018940 300 FIVSILLQEMAWTGQRLKAY----YSAGGVLWVFCGAGILILPMN 340 (348)
Q Consensus 300 i~g~~~~~~l~r~g~r~k~~----~~~g~~l~~v~~~~~~~~~~~ 340 (348)
++|.+..++++|..-|+|+. +..|.+++++.++..++..++
T Consensus 155 ~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~ 199 (267)
T PF07672_consen 155 FLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPG 199 (267)
T ss_pred hhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 56766677776655221343 334566666666665454443
No 243
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.74 E-value=0.0072 Score=56.56 Aligned_cols=132 Identities=9% Similarity=-0.017 Sum_probs=74.5
Q ss_pred HHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHh
Q 018940 69 QIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHM 148 (348)
Q Consensus 69 ~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 148 (348)
.+...=+..+.|++.||+||||.+. ...+++++..++++. |.. +.......+ ..-...+......+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMa-l~l~~f~iflfll~~-c~~-------rn~~tvllf-----~arafisg~fqvaY 456 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMA-LSLILFGIFLFLLTT-CKT-------RNAYTVLLF-----TARAFISGAFQVAY 456 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHH-HHHHHHHHHHHHHHH-hcC-------cchhHHHHH-----HHHHHHhchheEEE
Confidence 3344445679999999999999965 466666666655553 221 111111111 11122233333356
Q ss_pred hhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 018940 149 SMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEP 227 (348)
Q Consensus 149 a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~ 227 (348)
.+.+|+.|. +-|+...+......-+|+++.+.++ +. . +.+-..+..+++...++..+..+++--|+
T Consensus 457 vYtPEVyPT-avRatgvGtcSsmaRIggI~~p~iA--~~---~-------e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 457 VYTPEVYPT-AVRATGVGTCSSMARIGGIFSPVIA--MR---A-------ELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred EecCcccch-hhhhcchhhhhhHHhhhhhhhhHHH--HH---h-------ccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 788888864 6788777777777777887766554 21 1 11112233456666666666666554453
No 244
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.70 E-value=0.11 Score=49.18 Aligned_cols=115 Identities=10% Similarity=-0.033 Sum_probs=73.5
Q ss_pred hHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHH
Q 018940 27 LYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFS 105 (348)
Q Consensus 27 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~ 105 (348)
..+.++.+.--..--....+++.|+.+. |.++.+.+...+.+....+++-.+.-++..|+...|.+...+.+...+...
T Consensus 239 ~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~ 318 (422)
T COG0738 239 RLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLA 318 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 4444444444444445679999999996 999999999999999999999988888888998877765544333333322
Q ss_pred HHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhccc
Q 018940 106 SVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITL 156 (348)
Q Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~ 156 (348)
..+. + +.. . .|.+ .+.+...+...+...+..-+..+
T Consensus 319 ~~l~---~-------g~v-~--~~~l--~~ig~F~simfPTIfslal~~l~ 354 (422)
T COG0738 319 VALI---G-------GVV-A--LYAL--FLIGLFNSIMFPTIFSLALKNLG 354 (422)
T ss_pred HHHh---c-------ChH-H--HHHH--HHHHHHhHHHHHHHHHHHHhccC
Confidence 2221 1 222 1 2222 25666677666666666655554
No 245
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.66 E-value=0.008 Score=58.26 Aligned_cols=91 Identities=15% Similarity=0.164 Sum_probs=64.7
Q ss_pred HHHHhHH-HHHHHHHHHHHHHHHHhhhHHHHHHHhhccc----ccchhhhHHhHHHHHHHHHHHHHHHHH-HH-hhhhhh
Q 018940 245 YWFKKIL-YYQVALVYMLTRLVVNVSQAYLAFYVINDLR----MGQSAKALVPAIIYICSFIVSILLQEM-AW-TGQRLK 317 (348)
Q Consensus 245 ~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~----~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r-~g~r~k 317 (348)
..+++|+ ++.+...-+.-.+.+|++..-+..|+..+.+ ++.+++.-....+..-.-..++++||+ || +|+|
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~-- 92 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR-- 92 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh--
Confidence 4566654 5556667777888999999888888887776 776543322222222223445777887 88 8999
Q ss_pred HHHHHHHHHHHHHHHhHhhc
Q 018940 318 AYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 318 ~~~~~g~~l~~v~~~~~~~~ 337 (348)
|++.+|.++.++|.+++..-
T Consensus 93 ~tI~lGail~~iGh~~L~~~ 112 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAIS 112 (498)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999877654
No 246
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.63 E-value=0.015 Score=52.19 Aligned_cols=62 Identities=13% Similarity=0.180 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHH
Q 018940 42 CWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSF 104 (348)
Q Consensus 42 ~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~ 104 (348)
+..+|+=+.|++.|..+.++|-+...+.-..++...+.|.++||-||||.= +.-++...+++
T Consensus 55 LQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac-vtycitYiLsC 116 (454)
T KOG4332|consen 55 LQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC-VTYCITYILSC 116 (454)
T ss_pred hcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce-eeehHHHHHHH
Confidence 334555334455588899999999888889999999999999999999863 33344444443
No 247
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.45 E-value=0.22 Score=41.14 Aligned_cols=102 Identities=14% Similarity=0.030 Sum_probs=67.6
Q ss_pred HHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHH
Q 018940 65 MLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQ 144 (348)
Q Consensus 65 ~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 144 (348)
.++.....++..++...+.+|.|.|+.++ .|.+..++-....+ .| +.... .....+.|++.+...
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~-lg~~~y~~y~~~~~---~~-------~~~~l----~~~s~l~G~~~a~lW 107 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMI-LGSLGYAIYIASFF---YP-------NSYTL----YPASALLGFGAALLW 107 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHH-HHHHHHHHHHHHHH---hh-------hHHHH----HHHHHHHhhhhHHhh
Confidence 44556666677777888899999988865 56555554443322 12 11111 222247888888889
Q ss_pred HhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHH
Q 018940 145 VAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (348)
Q Consensus 145 ~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~ 182 (348)
.+....+.+.. ++++|++..++.......+.+.++..
T Consensus 108 ~aqg~ylt~~s-~~~~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 108 TAQGTYLTSYS-TEETIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred HhhhHHHHHcC-CHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99888888876 46788888887777777776666554
No 248
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.93 E-value=0.097 Score=38.43 Aligned_cols=66 Identities=18% Similarity=0.158 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHH
Q 018940 41 ACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSV 107 (348)
Q Consensus 41 ~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l 107 (348)
....+.+|.-.+|.++|.++.|++-+...+.+.++.....++.++.++|+. +..+.+..+++...+
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~-~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRL-LRAGLLLTVLSTAAM 74 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH-HHHHHHHHHHHHHHH
Confidence 344566666666679999999999999999999999999999988655544 556766666665543
No 249
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.87 E-value=0.13 Score=50.59 Aligned_cols=143 Identities=15% Similarity=0.065 Sum_probs=84.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC
Q 018940 31 SGHMLNDITAACWFTYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG 110 (348)
Q Consensus 31 ~g~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~ 110 (348)
+-.+...+....+.+|+-.+++|.|-.++..|.........-.+.-++.+++..|.||-|.+. .+....++=+. ..
T Consensus 378 ~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~-lgLa~~~~Rf~-~~-- 453 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY-LGLACNVGRFL-YY-- 453 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee-ehhhHHHHHHH-HH--
Confidence 334444455556667776777888877778887777777778888999999999999988754 34333333221 11
Q ss_pred cCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 018940 111 CMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNA-FTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~-~~~ig~~~~~~~~~~~~~ 188 (348)
.. ..+.|.....= ++-++-++.......+++...+| |+-|..+.++... .-.+|--.++.+++.++.
T Consensus 454 --S~----L~n~W~vLPie----ilqgit~aliWaa~~sY~s~vaP-p~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~ 521 (618)
T KOG3762|consen 454 --SY----LQNPWMVLPIE----ILQGITHALIWAAIISYASHVAP-PGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE 521 (618)
T ss_pred --HH----hcCchheeeHH----HHHHHHHHHHHHHHHHHHHhhCC-CcchHHHHHHHHHHhcccCcchhhhhhhhhhe
Confidence 10 11223221111 14456666777777778887775 5667666654332 333444445555545443
No 250
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.74 E-value=0.055 Score=55.30 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=53.6
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHH-HHHhhhhhhHhhhcccCCc-hHHHHHHHHHHHHH
Q 018940 28 YYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQI-ADGFATIFIGELIDRFGHF-KIWHGAGSVLVAVS 103 (348)
Q Consensus 28 ~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i-~~~i~~p~~G~l~Dr~Grr-r~~i~~~~~~~~i~ 103 (348)
...+..+........+..++|.|+++. |.++.++|.+.....+ ..+++.++.|+++||++++ |..+..+.+...++
T Consensus 334 ~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 334 LVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 344444455555556678999999886 9999999999887776 5678999999999999843 23333444433333
No 251
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=95.74 E-value=3.9e-05 Score=74.57 Aligned_cols=162 Identities=13% Similarity=0.002 Sum_probs=83.1
Q ss_pred HHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc---c
Q 018940 46 YLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST---L 122 (348)
Q Consensus 46 ~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~---~ 122 (348)
|.+..+++.|.+... .......+...++.++...+.||+|||+.++ .+....++....+.. +.......+ .
T Consensus 275 ~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 275 YSPSIFENAGISNSF--LATLILGLVNFLGTLLAIFLIDRFGRRKLLI-IGLLLMAICSLILGI---IFFLGVSSSSWWS 348 (451)
T ss_pred ccccccccccccccc--ccccccccccccccccccccccccccccccc-ccccccccccccccc---ccccccccccccc
Confidence 334444444666551 1122334555566777789999999997754 565555555432210 000011111 1
Q ss_pred hhHHHHHHHHHHHHHHHHH-HHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhH
Q 018940 123 KVETISYCVFAAIFNVGWA-ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQ 201 (348)
Q Consensus 123 ~~~~~~~~l~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (348)
........ +....++ ........+.+|+.| .+.|.+..++.+..+.+++.+.+.+.+.+.. ..+
T Consensus 349 ~~~i~~~~----l~~~~~~~g~~~~~~~~~~ElfP-t~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~----------~~~ 413 (451)
T PF00083_consen 349 ILSIVFLA----LFFAFFSLGWGPLPWIYTAELFP-TKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN----------NLG 413 (451)
T ss_pred cccceeee----ecccccccccccccccccccccc-ccccccccccccccccccccccccccccccc----------ccc
Confidence 11111111 1222222 222334467789886 5789888887777666666655444322221 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 202 YRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 202 ~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
-...+.+++.+.++..++.++++||.+
T Consensus 414 ~~~~~~i~~~~~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 414 GWGVFLIFAGVCLIAIIFVYFFLPETK 440 (451)
T ss_pred ccccchhhHHHHHHHHhheeEEEeeCC
Confidence 122344555666677777888899964
No 252
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.39 E-value=0.35 Score=45.30 Aligned_cols=73 Identities=14% Similarity=0.147 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHh
Q 018940 258 VYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAG 333 (348)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~ 333 (348)
.+.+...+-+.-.+|.-..+ +++|++..+.+.+.....+.+.+...+.+.+ ||+||| +.-+.-+++..++|+.
T Consensus 42 vY~La~~aDWLQGpY~Y~LY-~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk--~~cl~~cily~~scl~ 115 (354)
T PF05631_consen 42 VYLLAMAADWLQGPYLYALY-ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK--KACLLFCILYSLSCLT 115 (354)
T ss_pred HHHHHHHHHHhhcchhHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch--HHHHHHHHHHHHHHHH
Confidence 33344444444444443333 3579988777765555555666655566666 999999 7666666777777753
No 253
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.60 E-value=0.56 Score=44.43 Aligned_cols=77 Identities=8% Similarity=-0.147 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhHhhhhhhcccCc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHH
Q 018940 135 IFNVGWAATQVAHMSMVNCITLNS--TSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFI 212 (348)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~~~~~~--~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i 212 (348)
+..+|.|..-++..++.+|..+++ ++|.+..++.+.+.++|..++.... +.+. +..||.+.|.+.++.
T Consensus 42 lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~-~~i~---------~~~~~~~~f~i~~~~ 111 (372)
T PF00854_consen 42 LIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLV-PYIQ---------QNYGWFLGFGIPAIG 111 (372)
T ss_dssp HHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCC-CHHH---------HCS-HHHHHHHHHHH
T ss_pred HHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccc-hhhc---------cccchhhhhhHHHHH
Confidence 567888888888889999988643 3456788889999999988765442 2221 357899988887666
Q ss_pred HHHHHHHHH
Q 018940 213 GCCFVGIFL 221 (348)
Q Consensus 213 ~~~~~ll~~ 221 (348)
.++..+..+
T Consensus 112 ~~~~~~~f~ 120 (372)
T PF00854_consen 112 MLLALIVFL 120 (372)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555544443
No 254
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=94.17 E-value=0.13 Score=49.64 Aligned_cols=138 Identities=13% Similarity=-0.039 Sum_probs=76.9
Q ss_pred hhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhc
Q 018940 75 ATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCI 154 (348)
Q Consensus 75 ~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~ 154 (348)
+.++...++|+.|||+. .+.|...+.+....+-. |+. +..+....++.|.+..++.++|=+ .......+|.
T Consensus 364 Gyw~tv~~id~iGRk~i-q~~GF~~~~i~~~~~~~---~y~--~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~ 434 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRKYI-QLMGFFIMTIFFFVIAG---PYN--QLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEI 434 (538)
T ss_pred ceeEEEEEeehhhhHHH-HHhhHHHHHHHHHHHcC---Ccc--cccccCceeehHHHHHHHHhcCCC---ceeEEeehhh
Confidence 66778889999999876 45677777766654432 321 111222233444432222222110 1112234565
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 018940 155 TLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 228 (348)
Q Consensus 155 ~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~ 228 (348)
.| .+-|+..-++..+.+-.|++++.....++..- .+ ....+.++.+++.+...++..+..+ ++||.+
T Consensus 435 FP-arvR~t~hGIsAA~GK~GAivg~~~F~~~t~~--~y---p~~~g~~~v~~i~~~~~~~gi~~T~-l~pEtk 501 (538)
T KOG0252|consen 435 FP-ARVRSTCHGISAASGKAGAIVGAFGFLYLTDH--NY---PPNIGVRNVFIILAGCMLLGILFTL-LIPETK 501 (538)
T ss_pred ch-HHHhhhhhhHHHHhccchHHHHHHHhhHhhhc--cC---CccccchHHHHHHHHHHHHhHheeE-Eeeccc
Confidence 54 45677777777777777777766554444320 01 1245788899888777776666554 556753
No 255
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=93.80 E-value=3.1 Score=42.14 Aligned_cols=126 Identities=15% Similarity=0.172 Sum_probs=72.4
Q ss_pred HHHHHHHHhh-CCCh---hHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcc
Q 018940 45 TYLLLFLTDI-GLSP---RGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTS 120 (348)
Q Consensus 45 ~~l~~~~~~~-g~s~---~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~ 120 (348)
.+.|.....+ +-+. ...+++.....+...++..+.|.+.-+.||-|..++.+.+.+.+.+-.+.. .-| .+
T Consensus 331 ~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~-~~~-----~n 404 (599)
T PF06609_consen 331 ILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAA-VRP-----DN 404 (599)
T ss_pred HHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHH-ccC-----CC
Confidence 3444444443 4443 356778778888888888999999988888776666776666554433322 112 12
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHH
Q 018940 121 TLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (348)
Q Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~ 182 (348)
... . +.+. .+.+++.+....+......-..+ +++-+.++++......+|+.++..+
T Consensus 405 ~~~-~-i~~~---~l~g~giG~~~~~~~~~~ql~~p-~~~ig~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 405 KNA-A-IAFL---VLAGFGIGGILVPAIVIAQLIVP-DEDIGTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred cch-H-HHHH---HHHHHhHHHHHHHHHHeeEeeeC-chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 211 1 2232 25667777777776665555444 4566766655444444444444433
No 256
>PTZ00207 hypothetical protein; Provisional
Probab=93.38 E-value=0.76 Score=46.47 Aligned_cols=67 Identities=4% Similarity=0.016 Sum_probs=46.9
Q ss_pred HhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 267 NVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 267 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
+....+.+ .+++++|++..+.+....+....+ ...+..|++ ||+|+| +++.+|.+++.+++++..+.
T Consensus 44 y~fsv~s~-~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R--~vllig~ll~~iG~ll~ala 111 (591)
T PTZ00207 44 YAFNLISG-AMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPR--PIFVLSMTVFCLGTLLFALT 111 (591)
T ss_pred HHHHHHHH-HHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHH
Confidence 34444444 578888998876665444322222 234456887 999999 99999999999999887775
No 257
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=93.32 E-value=0.82 Score=33.57 Aligned_cols=67 Identities=16% Similarity=0.223 Sum_probs=49.6
Q ss_pred hhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 268 VSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 268 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
.....+|. .+++.+++.++.+.+....+++-++|++....+ ++..++ +.+..++++.++.++.+.+.
T Consensus 10 ayTplLP~-M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~--~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 10 AYTPLLPL-MQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR--RLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHhHhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH--HHHHHHHHHHHHHHHHHHHH
Confidence 33445554 566679998888888888888889999888877 554555 78888888888887666554
No 258
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=93.11 E-value=0.88 Score=44.68 Aligned_cols=67 Identities=7% Similarity=0.141 Sum_probs=53.8
Q ss_pred hhHHHHHHHhhcccccchh-hhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 269 SQAYLAFYVINDLRMGQSA-KALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 269 ~~~~~~~yl~~~~~~~~~~-~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
..++...|+.+++|++.++ .+.+......+-.+.-+.++++ ||+|-| +++..+++.+.+..+++.+.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K--~vL~l~~l~Wsl~t~L~~fa 112 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK--PVLVLQALSFVCVWLLLLLG 112 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch--HHHHHHHHHHHHHHHHHHHH
Confidence 3445666888899999887 6655555566777788888888 999999 99999999999998888775
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=92.59 E-value=9.9 Score=36.97 Aligned_cols=130 Identities=15% Similarity=0.073 Sum_probs=82.9
Q ss_pred HHHHHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHH---HHHHhcCcCCCcccCccc
Q 018940 45 TYLLLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS---FSSVFGGCMPCRILSTST 121 (348)
Q Consensus 45 ~~l~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~---~~~l~~~~~~~~~~~~~~ 121 (348)
..+..|+...|+|+.++|..-+.+.+....+.....++.+|.|..|.= +++...-... ....++ .|. ...+
T Consensus 279 ~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G-~~~l~~q~~~L~~~v~~~~--~~~---~~~~ 352 (432)
T PF06963_consen 279 GLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG-LWSLWWQWVCLALCVVSFW--APG---SPFS 352 (432)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH-HHHHHHHHHHHHHHHHHHh--cCC---CCch
Confidence 344567766799999999999999999999999999999999987653 2343221111 111221 231 0001
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHH
Q 018940 122 LKVETISYCVFAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAI 182 (348)
Q Consensus 122 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~ 182 (348)
.... ..+.....+.-+|.-+++....-++.|.. +++||+..++..++.+++--++...+
T Consensus 353 ~~s~-~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V-~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 353 SISA-YLLLGGIALSRIGLWSFDLAVTQIMQENV-PESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred hhHH-HHHHHHHHHHHHHHHhhhHHHHHhhcccC-CHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11111112233666677777777888876 46899999999998888877765443
No 260
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.33 E-value=5.4 Score=40.31 Aligned_cols=188 Identities=11% Similarity=0.056 Sum_probs=96.8
Q ss_pred chHhhHHhhhhhH-HHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc-cCCchHHHHHHHHH
Q 018940 23 RWSVLYYGSGHML-NDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDR-FGHFKIWHGAGSVL 99 (348)
Q Consensus 23 ~~~~~~~~~g~~~-~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr-~Grrr~~i~~~~~~ 99 (348)
.|+...|.+++-. -..+......-+..|+++. +.+...+.-......-..-+.....+.++|- +||-+.. ..+..+
T Consensus 35 ~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI-~~~s~i 113 (571)
T KOG1237|consen 35 GWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTI-NIGSLI 113 (571)
T ss_pred hhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHH-HHHHHH
Confidence 3445666666433 2222223345566788876 8887878777777777777788899999996 6988775 445555
Q ss_pred HHHHHHHHh-cCcCCCcc---------c---CcccchhHHHHHHHHHHHHHHHHHHHHHhHhhhhhhccc--Ccccc-h-
Q 018940 100 VAVSFSSVF-GGCMPCRI---------L---STSTLKVETISYCVFAAIFNVGWAATQVAHMSMVNCITL--NSTSR-V- 162 (348)
Q Consensus 100 ~~i~~~~l~-~~~~~~~~---------~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~R-~- 162 (348)
..++..++- ....|... . +..+.....+.|.-+ ....+|.+.......+.-+|-.. +++++ .
T Consensus 114 ~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l-~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~ 192 (571)
T KOG1237|consen 114 SLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGAL-YLIALGAGGIRPCLLAFGADQFDELDPVEVKGI 192 (571)
T ss_pred HHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHH-HHheeccCCCCCcchhhcccccCccCcchhhCc
Confidence 444432211 00011000 0 000111111222211 12334455555555566666553 12222 2
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 018940 163 -VLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLS 222 (348)
Q Consensus 163 -~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~ 222 (348)
+...|.+...++|..++..+. ... ++..+|.+-+-+..+...+..++++.
T Consensus 193 ~~fFnW~yf~~~~g~l~a~t~~-vyi---------q~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 193 PSFFNWFYFSQNGGALLAQTVL-VYI---------QDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred ccchhHHHHHHHHHHHHHHHHH-Hhh---------hhcccceeeccHHHHHHHHHHHHHHc
Confidence 456778777777776654331 111 12456766666555544444444433
No 261
>PRK03612 spermidine synthase; Provisional
Probab=92.02 E-value=14 Score=36.86 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=30.2
Q ss_pred HHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhc
Q 018940 48 LLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELID 84 (348)
Q Consensus 48 ~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~D 84 (348)
.-.+..+ |-+..+.+.+++++-...++++.+.|++.+
T Consensus 38 ~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~ 75 (521)
T PRK03612 38 GTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLR 75 (521)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3444444 899999999999999999999999888874
No 262
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=90.72 E-value=0.88 Score=43.96 Aligned_cols=49 Identities=16% Similarity=0.065 Sum_probs=37.6
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHH
Q 018940 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVS 103 (348)
Q Consensus 55 g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~ 103 (348)
|.++...|.+....-+..++++.+.|.+.||.++.|..++.-.....++
T Consensus 297 gY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 297 GYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred cCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 7777888999999999999999999999999887665444443333333
No 263
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=90.29 E-value=20 Score=35.44 Aligned_cols=136 Identities=9% Similarity=-0.102 Sum_probs=68.9
Q ss_pred HHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHHHHHHHHhHhhh
Q 018940 71 ADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVGWAATQVAHMSM 150 (348)
Q Consensus 71 ~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~ 150 (348)
.........+...||+|||.+.. .+.....+++..... .+. ........+... +...+.+.........
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~-~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 430 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLF-LSLFLAGIGLLLFGW--LPD----DLGGWLHWILPL----LGKFFIGSAFNLIFLY 430 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHH-HHHHHHHHHHHHHHH--hhc----cchhHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 44445556689999999987764 455555555543321 221 111001111111 1112222222223455
Q ss_pred hhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 018940 151 VNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 229 (348)
Q Consensus 151 ~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e~~~ 229 (348)
.+|+.|+ .-|..+.+.......+|+++++.+....... ..... ..+++..+.+...+...++||++.
T Consensus 431 ~~el~pt-~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~---------~~~~~--~~~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 431 SAELIPT-VVRNTAVGAISAAARLGSILAPLFPLLLRQM---------FPLLG--LILFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred HHhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------cccch--HHHHHHHHHHHHHHHHhcCcccCC
Confidence 6677753 4688887777777777777765542111110 01111 112455666666777788999654
No 264
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=89.62 E-value=7.4 Score=37.83 Aligned_cols=161 Identities=8% Similarity=-0.010 Sum_probs=86.7
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCc--ccchhHHHHHHHHH
Q 018940 56 LSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILST--STLKVETISYCVFA 133 (348)
Q Consensus 56 ~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~--~~~~~~~~~~~l~~ 133 (348)
.|+...|.+..++.+...++..+..+.-=++.-|+.+. ...+..++....-.. .+. .+... .+..+..+.-.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~-~t~~~~~~~~l~~~~-lv~-~~n~~~Gi~d~~f~lgd~--- 325 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFV-VTTLVSVLASLFDLL-LVT-RWNLDLGIPDQWFALGDT--- 325 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHhcccEE-EEE-EEeeeeCcCCeEEEEEhH---
Confidence 88888999888888888887777766555555455543 333333322211000 000 00000 00000001111
Q ss_pred HHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHH
Q 018940 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIG 213 (348)
Q Consensus 134 ~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~ 213 (348)
.+..+.......|...+++++.| +...+...++.....++|..++..++..+...++..+ ++-.+-.+..+++.+..
T Consensus 326 ~l~~~~~~i~~mP~lvl~a~lcP-~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~--~~f~~l~~lili~~~~~ 402 (433)
T PF03092_consen 326 ILEEVIGMIAFMPSLVLAARLCP-KGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTR--DDFSNLWLLILICSVIQ 402 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--ccccchHHHHHHHHHHH
Confidence 23445555667788888999886 4566777788778888888887777666666555321 12223344455555555
Q ss_pred HHHHHHHHhhccc
Q 018940 214 CCFVGIFLSRTEE 226 (348)
Q Consensus 214 ~~~~ll~~~~~~e 226 (348)
++. +....++|+
T Consensus 403 ll~-l~ll~lLp~ 414 (433)
T PF03092_consen 403 LLP-LPLLFLLPP 414 (433)
T ss_pred HHH-HHHHHHcCC
Confidence 333 333445554
No 265
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=89.14 E-value=22 Score=34.19 Aligned_cols=51 Identities=14% Similarity=0.025 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHhh-CCCh--hHHHHHHHHHHHHHHhhhhhhHhhhcc
Q 018940 35 LNDITAACWFTYLLLFLTDI-GLSP--RGAAAVMLSGQIADGFATIFIGELIDR 85 (348)
Q Consensus 35 ~~~~~~~~~~~~l~~~~~~~-g~s~--~~~g~i~~~~~i~~~i~~p~~G~l~Dr 85 (348)
+.-..+..+.+--++|+.+. +-++ .--......+.+...+....--++.-|
T Consensus 29 G~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 29 GTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred ccccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666667777776 5444 223444555566666666666677766
No 266
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=88.71 E-value=21 Score=33.42 Aligned_cols=60 Identities=17% Similarity=0.257 Sum_probs=35.0
Q ss_pred HHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhccC
Q 018940 276 YVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILPM 339 (348)
Q Consensus 276 yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~~ 339 (348)
|+....|++. .+....+.++...+.+.+.+.+ +++||. .....|.+.--.-...+++-++
T Consensus 302 ~V~c~~Gv~~--igf~m~cfgv~~Av~S~~~g~L~~~~gr~--~~~v~gavv~l~li~~~~~w~~ 362 (390)
T KOG3097|consen 302 YVACALGVSR--IGFAMACFGVGDAVASSLFGLLGKWIGRP--PLLVLGAVVHLLLITILFFWAP 362 (390)
T ss_pred hhhhhhhHHH--HHHHHHHHHHHHHHHHHHHHHHHhhcCCc--cHHHHHHHHHHHHHHHHHhccc
Confidence 3444444443 4445455666656666566665 999999 7777776654444444444433
No 267
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=88.42 E-value=24 Score=33.98 Aligned_cols=51 Identities=8% Similarity=-0.091 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIV 186 (348)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~ 186 (348)
..|+..|+.++.....+.+-. +++||....+....+...|..+++.++.++
T Consensus 344 ~eGLlGGa~YVNtF~~I~~~~-~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 344 YEGLLGGASYVNTFYRISEEV-PPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHhhhHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 455555666666666666655 468899999988888888888877765443
No 268
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=86.69 E-value=34 Score=33.69 Aligned_cols=210 Identities=10% Similarity=0.011 Sum_probs=101.1
Q ss_pred CCChhHHHHHHHHHHH-HHHhhhhhhHhhhcccCCchHHHHHHHHHHHHHHHHHhcC-cCCCccc--Cc---------cc
Q 018940 55 GLSPRGAAAVMLSGQI-ADGFATIFIGELIDRFGHFKIWHGAGSVLVAVSFSSVFGG-CMPCRIL--ST---------ST 121 (348)
Q Consensus 55 g~s~~~~g~i~~~~~i-~~~i~~p~~G~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~-~~~~~~~--~~---------~~ 121 (348)
..++..+..+=...-+ +..+..++.+.++++.-|+|.+-... ....+++.+|.. ..|+.-. ++ ..
T Consensus 57 ~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~--~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~ 134 (509)
T COG3202 57 RQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIIL--GFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADL 134 (509)
T ss_pred cCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHH--HHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhC
Confidence 4567777777766666 66778899999999998877764322 112222222210 0132000 00 00
Q ss_pred c-h--hHH-----HHHHHHHHHHHHHHH-HHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 018940 122 L-K--VET-----ISYCVFAAIFNVGWA-ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA 192 (348)
Q Consensus 122 ~-~--~~~-----~~~~l~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~ 192 (348)
+ . +.+ ..+.+..+...+-.+ ..+.-+...+.|++. .+|-.|..+..+.+.+++..+++.+...+......
T Consensus 135 p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt-~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~ 213 (509)
T COG3202 135 PMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT-IEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDA 213 (509)
T ss_pred CccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhh
Confidence 0 0 000 112211112222111 122235667778774 45667888888888888877766554333210000
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHHHHHhhccc---ccc---c---c--cccCCchhHHHHHHHHHhHHHHHHHHHHHH
Q 018940 193 KTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEE---PRL---K---M--GLRGNSHARISWAYWFKKILYYQVALVYML 261 (348)
Q Consensus 193 ~~~~~~~~g~~~~~~i~~~i~~~~~ll~~~~~~e---~~~---~---~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 261 (348)
..........+..+.+.++.++++..+-.+.=++ ++. . + .++.+.+..++++.+.|.|.++.+.+...+
T Consensus 214 ~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~ 293 (509)
T COG3202 214 LASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLA 293 (509)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHH
Confidence 0000011234555555544444444333222111 111 0 0 011233456788888999998877666555
Q ss_pred HHHHHH
Q 018940 262 TRLVVN 267 (348)
Q Consensus 262 ~~~~~~ 267 (348)
.....+
T Consensus 294 Y~v~in 299 (509)
T COG3202 294 YGVSIN 299 (509)
T ss_pred HHHHHH
Confidence 544443
No 269
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=86.47 E-value=21 Score=35.03 Aligned_cols=119 Identities=7% Similarity=-0.041 Sum_probs=76.9
Q ss_pred hCCChhHHHHHHHHHHHHHHhhhhhhH-hhhcccCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHH
Q 018940 54 IGLSPRGAAAVMLSGQIADGFATIFIG-ELIDRFGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVF 132 (348)
Q Consensus 54 ~g~s~~~~g~i~~~~~i~~~i~~p~~G-~l~Dr~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 132 (348)
+|.+..+.+...+...+...+.+.+.. .+.-+.|-|+ .+..|...-.+....... . ...+..+...
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~-~i~lGl~~~~~~~~~~af---~------~~~w~~~~~~--- 338 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR-LISLGLLSEFLQLLLFAF---A------TETWMMFAAG--- 338 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-HhhHHHHHHHHHHHHHHH---h------ccchhhhHHH---
Confidence 399999999999999999999998888 5665678777 455565555454432211 1 1222121111
Q ss_pred HHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 133 AAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 133 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
..........+...+.++.+. ++|||+++.++........+.+++.+-..+..
T Consensus 339 --v~~~~~~~~~pa~~s~~s~~v-~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 339 --VVVALAGIVFPAIRAFASILV-SPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred --HHHHhhcchhHHHHhHHHhhc-ccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 222223344445566666666 57899999999988888888887777656554
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.48 E-value=39 Score=33.18 Aligned_cols=116 Identities=14% Similarity=0.120 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhcc---cCCchHHHHHHHHHHHHHHHHHhcCcCCCcc--cCcc--cch--hHHHHHHH
Q 018940 61 AAAVMLSGQIADGFATIFIGELIDR---FGHFKIWHGAGSVLVAVSFSSVFGGCMPCRI--LSTS--TLK--VETISYCV 131 (348)
Q Consensus 61 ~g~i~~~~~i~~~i~~p~~G~l~Dr---~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~--~~~~--~~~--~~~~~~~l 131 (348)
.+.-.....+...++..+++.+++| +||++. +..+.++..+...+... ..|... .++. +.. .-.....+
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~-~~~~~~~~~~~~~li~l-~~p~dap~~~t~~~~~~~~~~~~~~~i 358 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPT-VLIGIIIHLIGFLLIHL-SFPNDAPLRPTDSPPLLFTPSYYLALI 358 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcc-hhHHHHHHHHHHHHHhc-cccccCCCCCCcccccccccchhHHHH
Confidence 3444445556666667777777775 788655 55666666666544432 234211 0000 000 00111222
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHH
Q 018940 132 FAAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLY 180 (348)
Q Consensus 132 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~ 180 (348)
+..+.|++-++.+.-.+..++... ++||..+.++...-..++..++.
T Consensus 359 i~~l~G~~D~~~~t~~~~ii~~~~--~~~~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 359 IGFLLGFGDACFNTQRYVIIALLY--PDDRAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHHHHh
Confidence 334677888888887777887766 46787777766656566655533
No 271
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=84.61 E-value=0.42 Score=46.13 Aligned_cols=83 Identities=16% Similarity=0.120 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-----HHhhhhhhHHHHHHHHHH
Q 018940 253 YQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-----AWTGQRLKAYYSAGGVLW 327 (348)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-----~r~g~r~k~~~~~g~~l~ 327 (348)
..+....+-.++++..-..|.+.|+++. |.+.+..++...+.-+.+++.-++.|.. .|+||| |+.+..+....
T Consensus 35 i~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRR-RPfI~~~s~~i 112 (498)
T KOG0637|consen 35 ISVASIAAGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRR-RPFILAGSLLI 112 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceecccccccccccccccccc-cchHHHhhHHH
Confidence 3344445555778888888999999874 8877766665555445555555555543 468888 55666666666
Q ss_pred HHHHHhHhhc
Q 018940 328 VFCGAGILIL 337 (348)
Q Consensus 328 ~v~~~~~~~~ 337 (348)
.++..++.++
T Consensus 113 ~~~l~Lig~a 122 (498)
T KOG0637|consen 113 AVSLFLIGYA 122 (498)
T ss_pred HHHHhhhhhH
Confidence 6766655443
No 272
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=84.28 E-value=2.7 Score=40.86 Aligned_cols=58 Identities=14% Similarity=0.201 Sum_probs=46.2
Q ss_pred HHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhH
Q 018940 275 FYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGI 334 (348)
Q Consensus 275 ~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~ 334 (348)
+=+++..|++.++.+++..+..+.-.+.+++.+.+ ||+.|+ .++.+|..+|+.+.++-
T Consensus 57 ~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~--~v~~vG~~iW~~Av~~~ 115 (493)
T KOG1330|consen 57 KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK--RVIAVGIFIWTLAVFAS 115 (493)
T ss_pred HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc--eEEeeHHHHHHHHHHHH
Confidence 34677788888777777777777778888999998 999999 88889988888776543
No 273
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=83.84 E-value=2.9 Score=42.92 Aligned_cols=70 Identities=13% Similarity=0.175 Sum_probs=47.7
Q ss_pred HHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH--HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 266 VNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM--AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 266 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l--~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
++++.+-+..|+.+.+|++...+..+........-+.+++++++ +++|++ +++..+.++..+|.+++.+.
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~--~tIl~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF--KTILYLSIVYVVGHALLSFG 74 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHHHHHHHhc
Confidence 45667778888888888876543322222222334445556665 679999 99999999999998777664
No 274
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=83.39 E-value=42 Score=31.84 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=29.9
Q ss_pred HHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 141 AATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVF 187 (348)
Q Consensus 141 ~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~ 187 (348)
++..+++.+.+-+.. +|+++-++.+...+..-.|-..++..+..++
T Consensus 109 tAaEIAYysYIYs~V-d~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLv 154 (433)
T KOG3810|consen 109 TAAEIAYYSYIYSKV-DPEMYKRVTGYCRAAFLVGKFVGSVLAQLLV 154 (433)
T ss_pred HHHHHhhhheeeeec-CHHHHHHHHHHhHHHHHHHhHHHhHHHHHHh
Confidence 355667777776655 5677778877766666667676666554444
No 275
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=82.18 E-value=5.2 Score=38.13 Aligned_cols=49 Identities=14% Similarity=-0.025 Sum_probs=37.7
Q ss_pred cchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhH
Q 018940 284 GQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGI 334 (348)
Q Consensus 284 ~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~ 334 (348)
+....+++....++.-++.++..|.+ ||+||| .++.+|+...++.++.+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk--pvll~c~~~va~s~ll~ 115 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRK--PVLLACLIGVALSYLLW 115 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCch--HHHHHHHHHHHHHHHHH
Confidence 33455666676777888999888888 999999 98888888777765443
No 276
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=79.92 E-value=6.1 Score=35.38 Aligned_cols=67 Identities=16% Similarity=0.016 Sum_probs=51.3
Q ss_pred HhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 267 NVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 267 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
+.+. .|..-+++++|++.++...+.....++..+| +..|.+ ||.|.+ .++.+|.+...+|+...+..
T Consensus 19 Y~Fs-~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~--~~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 19 YTFS-AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW--VVLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred cchh-hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH--HHHHHHHHHHHHHHHHHHHH
Confidence 3444 3444578889999887777766666666654 667887 999999 99999999999999877765
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=71.18 E-value=1e+02 Score=30.00 Aligned_cols=49 Identities=12% Similarity=0.047 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHH
Q 018940 134 AIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIA 183 (348)
Q Consensus 134 ~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~ 183 (348)
.++++..|..........++.. +++||..+..+.......|-.+++.++
T Consensus 380 ~l~gltnGy~~s~~m~~~p~~v-~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 380 LLFGFSNGYLGSLSMCLAPRQV-DPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHhhhHHHHHHHHhcCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666666655555555556655 457888887777777777766665543
No 278
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=67.12 E-value=4.3 Score=39.92 Aligned_cols=62 Identities=19% Similarity=0.070 Sum_probs=42.0
Q ss_pred HHHhh-cccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhc
Q 018940 275 FYVIN-DLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILIL 337 (348)
Q Consensus 275 ~yl~~-~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~ 337 (348)
.|+++ +.+.+.+..++......++-.+.++..++| +|.++- |+.+.+|.+++++++++...+
T Consensus 59 pYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~-k~Pli~s~ii~~~g~llY~~l 122 (488)
T KOG2325|consen 59 PYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV-KKPLIVSFLIAIIGNLLYLAL 122 (488)
T ss_pred hhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc-ccCHHHHHHHHHHHHHHHHHH
Confidence 35555 234444444555455566677888888888 777753 477899999999999877444
No 279
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=57.19 E-value=77 Score=29.19 Aligned_cols=75 Identities=12% Similarity=0.158 Sum_probs=36.2
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH--HHhhhhhhHHHH
Q 018940 244 AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM--AWTGQRLKAYYS 321 (348)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l--~r~g~r~k~~~~ 321 (348)
+..+++|.++.-.+...+..........+.|.-+..- + ..+.-+...+++.++ +|++++ =.
T Consensus 45 ~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~P------------l-g~~~lv~~~~~a~~~l~e~~~~~----~~ 107 (300)
T PF05653_consen 45 RSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVAP------------L-GALSLVFNAVLARFFLGEKLTRR----DI 107 (300)
T ss_pred hHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHHH------------H-HhhhhhhHHHHhHHHhcccchHh----HH
Confidence 4567777766544444444443333344444322221 1 111223334555543 556655 46
Q ss_pred HHHHHHHHHHHhHh
Q 018940 322 AGGVLWVFCGAGIL 335 (348)
Q Consensus 322 ~g~~l~~v~~~~~~ 335 (348)
.|..+.++|.....
T Consensus 108 ~G~~l~i~G~~liv 121 (300)
T PF05653_consen 108 VGCALIILGSVLIV 121 (300)
T ss_pred hhHHHHHhhheeeE
Confidence 66667777765544
No 280
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=56.24 E-value=78 Score=27.28 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=25.8
Q ss_pred HHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHh
Q 018940 290 LVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAG 333 (348)
Q Consensus 290 ~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~ 333 (348)
.......+...++.++.+.+ ||.||| +.+..+.....++.+.
T Consensus 43 ~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~ 85 (338)
T COG0477 43 LLLSAFFLGYAIGSLLAGPLGDRYGRR--KVLIIGLLLFLLGTLL 85 (338)
T ss_pred HHHHHHHHHHHHHhhhhhhccccccch--HHHHHHHHHHHHHHHH
Confidence 33344445556666778887 999988 6666666544444333
No 281
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=53.08 E-value=4.5 Score=40.59 Aligned_cols=70 Identities=11% Similarity=0.112 Sum_probs=0.0
Q ss_pred HHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHh
Q 018940 264 LVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGIL 335 (348)
Q Consensus 264 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~ 335 (348)
...++...-.-+-++++.+++.++.+++....-++.++..++.... +|-.|- |.+-.|..++++|++++.
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp--rwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP--RWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp -------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--ceeeecHHHHHHHHHHHh
Confidence 4444444444456788899999888888777778888877767665 554444 667888888888886543
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=51.93 E-value=1.5e+02 Score=28.61 Aligned_cols=46 Identities=17% Similarity=0.100 Sum_probs=27.9
Q ss_pred HHHHHHHhh---CC-ChhHHHHHHHH-HHHHHHhhhhhhHhhhcccCCchHH
Q 018940 46 YLLLFLTDI---GL-SPRGAAAVMLS-GQIADGFATIFIGELIDRFGHFKIW 92 (348)
Q Consensus 46 ~l~~~~~~~---g~-s~~~~g~i~~~-~~i~~~i~~p~~G~l~Dr~Grrr~~ 92 (348)
..|-+..+. +. +..-.-.+... +.+.|.++.+.+.++-++ +||+.+
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~ 315 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP-DPRKLT 315 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC-CCceeh
Confidence 345555443 22 33444555666 899999998888777664 345544
No 283
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=50.08 E-value=1.4e+02 Score=24.46 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHH
Q 018940 294 IIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGA 332 (348)
Q Consensus 294 ~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~ 332 (348)
+.+....+..++.|.+ +|+|.| +++.+|.+..++=.+
T Consensus 45 i~Y~~~~~s~l~~P~iv~~lg~K--~sm~lg~~~y~~y~~ 82 (156)
T PF05978_consen 45 ILYGSFAISCLFAPSIVNKLGPK--WSMILGSLGYAIYIA 82 (156)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhH--HHHHHHHHHHHHHHH
Confidence 3445566777888886 999999 888888777664443
No 284
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=49.83 E-value=1.7e+02 Score=29.31 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHH-HHhhhhh-hH-HHHHHHH
Q 018940 293 AIIYICSFIVSILLQEM-AWTGQRL-KA-YYSAGGV 325 (348)
Q Consensus 293 ~~~~~~~i~g~~~~~~l-~r~g~r~-k~-~~~~g~~ 325 (348)
.+..+++++++..++++ +.++.|. |+ ++..+.+
T Consensus 304 ~~y~~~~~iaGy~S~~~yk~~~g~~W~~~~~lt~~~ 339 (521)
T PF02990_consen 304 ILYALTSFIAGYVSARLYKSFGGKKWKKNSILTSLL 339 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCCCceeehhhHHHHH
Confidence 33456677777777777 7777443 33 3444433
No 285
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=49.79 E-value=1e+02 Score=23.93 Aligned_cols=76 Identities=14% Similarity=0.063 Sum_probs=34.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHHHHHHHHHHHHHHHH-H-HHhhhhhh
Q 018940 240 RISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQE-M-AWTGQRLK 317 (348)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-l-~r~g~r~k 317 (348)
.+..+.+++|+++..-.+.+.+.. -...+...+.+++.. .|.... .+++...+.++ + +|...+
T Consensus 32 ~~~~~~Ll~n~~y~ipf~lNq~GS--------v~f~~~L~~~dlSla----vPi~Ns-l~fvfT~l~g~~lge~~~~~-- 96 (113)
T PF10639_consen 32 LQEIKFLLLNPKYIIPFLLNQSGS--------VLFFLLLGSADLSLA----VPIANS-LAFVFTALTGWLLGEEVISR-- 96 (113)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH--------HHHHHHHhcCCceee----ehHHhH-HHHHHHHHHHHHhcCcccch--
Confidence 344566777777654333333221 112233444455542 333322 23344444444 4 555433
Q ss_pred HHHHHHHHHHHHHH
Q 018940 318 AYYSAGGVLWVFCG 331 (348)
Q Consensus 318 ~~~~~g~~l~~v~~ 331 (348)
+ -+.|+.+...|.
T Consensus 97 ~-~~~G~~Li~~Gv 109 (113)
T PF10639_consen 97 R-TWLGMALILAGV 109 (113)
T ss_pred h-HHHHHHHHHcCe
Confidence 2 256666555543
No 286
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=49.04 E-value=1.1e+02 Score=22.90 Aligned_cols=49 Identities=18% Similarity=0.059 Sum_probs=30.5
Q ss_pred hhHHhHHHHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHhHhhcc
Q 018940 288 KALVPAIIYICSFIVSILLQEM-AWTGQRLKAYYSAGGVLWVFCGAGILILP 338 (348)
Q Consensus 288 ~~~~~~~~~~~~i~g~~~~~~l-~r~g~r~k~~~~~g~~l~~v~~~~~~~~~ 338 (348)
.+.......++..+++.+.+.+ ++.+.+ ..+........++.+...+..
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWR--APFLFLAILALAAFILLAFLL 138 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchH--HHHHHHHHHHHHHHHHHhhcC
Confidence 3344455566777888888877 777877 666665555555554444443
No 287
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=47.32 E-value=3.1e+02 Score=27.48 Aligned_cols=43 Identities=12% Similarity=-0.001 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHH
Q 018940 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLS 178 (348)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~ 178 (348)
+.++......++.+|.=+.++ ||.--|..+.+.|..+|+|+.-
T Consensus 414 l~sf~stvmFVai~AFharIS-DP~IGGTYMTLLNTvSNLGGtW 456 (544)
T PF13000_consen 414 LSSFMSTVMFVAIMAFHARIS-DPAIGGTYMTLLNTVSNLGGTW 456 (544)
T ss_pred HHHHHHHHHHHHHHHHHhhcc-CcccchHHHHHHHHHHhcCCCc
Confidence 444556667777777777776 6777788888888888887543
No 288
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=45.43 E-value=3.1e+02 Score=27.05 Aligned_cols=68 Identities=9% Similarity=0.067 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHH
Q 018940 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFI 212 (348)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i 212 (348)
..++..+..+....+.+.+..|+++||+...+-.+...++..++...+...++ ...||.....+.-++
T Consensus 275 ~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~----------~~~Gw~~~a~i~Pii 342 (472)
T TIGR00769 275 AYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVI----------RKYGWLTAALITPLV 342 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHhhHHHHHHHHHHH
Confidence 45566667777777888888888889988877665554444433333322222 245777665544333
No 289
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=44.73 E-value=3e+02 Score=26.59 Aligned_cols=136 Identities=13% Similarity=0.029 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHhhhhhhHhhhcccC-CchHHHHHHHHHHHHHHHHHhcCcCCCcccCcccchhHHHHHHHHHHHHHHH
Q 018940 61 AAAVMLSGQIADGFATIFIGELIDRFG-HFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTSTLKVETISYCVFAAIFNVG 139 (348)
Q Consensus 61 ~g~i~~~~~i~~~i~~p~~G~l~Dr~G-rrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 139 (348)
.|.++.+--+...+.....-+..+|.. ++|.+ ......++++..... + .+.. . .++...+.+++
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~--~~~~l~~~g~l~va~-------~--~~v~-~---~l~Gv~las~s 125 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRIL--ICVALSAAGMLLVAF-------S--PSVW-V---RLLGVVLASLS 125 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHH--HHHHHHHHHHhheee-------c--cchh-H---HHHHHHHHhhh
Confidence 455666666666667777777888764 33443 234445555432211 1 1222 1 12222355566
Q ss_pred HHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHH
Q 018940 140 WAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGI 219 (348)
Q Consensus 140 ~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll 219 (348)
.+......-++... .+ +..+++|. .|...++++++..-. .+...+ ..-|..+.+..++.++..+.
T Consensus 126 sg~GE~tfL~lt~~----y~-~~~l~~ws-sGTG~aGl~Ga~~y~-~lT~~g--------~s~~~tll~~~~lp~~~~~~ 190 (402)
T PF02487_consen 126 SGLGEVTFLSLTHF----YG-KSSLSAWS-SGTGGAGLVGALYYL-GLTTLG--------LSPRTTLLIMLVLPAIFLLS 190 (402)
T ss_pred hhhhHHHHHHHHHh----cC-cccccccc-CCcChhhHHHHHHHH-HHHHhC--------cCHHHHHHHHHHHHHHHHHH
Confidence 66666666665542 22 22344443 465566666554422 221111 22345555555555544444
Q ss_pred HHhhccc
Q 018940 220 FLSRTEE 226 (348)
Q Consensus 220 ~~~~~~e 226 (348)
.++..|+
T Consensus 191 ~f~~L~~ 197 (402)
T PF02487_consen 191 YFFLLPS 197 (402)
T ss_pred HHHhhcc
Confidence 4445543
No 290
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.65 E-value=79 Score=24.27 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhhhhhhHhhhcccCCchHHHH
Q 018940 62 AAVMLSGQIADGFATIFIGELIDRFGHFKIWHG 94 (348)
Q Consensus 62 g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~ 94 (348)
+.-++.-.+...++....||+.||+-.-+||-+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwgl 77 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGL 77 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 344555667777778899999999754567643
No 291
>PF01578 Cytochrom_C_asm: Cytochrome C assembly protein; InterPro: IPR002541 This entry consists of various proteins involved in cytochrome c assembly from mitochondria and bacteria; CycK from Rhizobium leguminosarum [], CcmC from Escherichia coli and Paracoccus denitrificans [, ] and orf240 from Triticum aestivum (Wheat) mitochondria []. The members of this family are probably integral membrane proteins with six predicted transmembrane helices that may comprise the membrane component of an ABC (ATP binding cassette) transporter complex. This transporter may be necessary for transport of some component needed for cytochrome c assembly. One member, R. leguminosarum CycK, contains a putative haem-binding motif []. Wheat orf240 also contains a putative haem-binding motif and is a proposed ABC transporter with c-type haem as its proposed substrate []. However it seems unlikely that all members of this family transport haem or c-type apocytochromes because P. denitrificans CcmC transports neither [].; GO: 0006461 protein complex assembly, 0008535 respiratory chain complex IV assembly, 0016020 membrane
Probab=42.27 E-value=2.2e+02 Score=24.38 Aligned_cols=27 Identities=11% Similarity=-0.117 Sum_probs=11.6
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018940 302 VSILLQEMAWTGQRLKAYYSAGGVLWVF 329 (348)
Q Consensus 302 g~~~~~~l~r~g~r~k~~~~~g~~l~~v 329 (348)
+..+-.+..| |+|.|+......+.+.+
T Consensus 172 ~~~lh~r~~~-~~~gr~~a~~~i~gf~~ 198 (214)
T PF01578_consen 172 GAYLHLRSWK-GWRGRRAAYLSIIGFLL 198 (214)
T ss_pred HHHHHHHHhh-chhhHHHHHHHHHHHHH
Confidence 3444444323 54544554444444333
No 292
>TIGR02908 CoxD_Bacillus cytochrome c oxidase, subunit IVB. This model represents a small clade of cytochrome oxidase subunit IV's found in the Bacilli.
Probab=41.73 E-value=1.6e+02 Score=22.68 Aligned_cols=51 Identities=10% Similarity=0.030 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchH
Q 018940 41 ACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKI 91 (348)
Q Consensus 41 ~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~ 91 (348)
+++.+.+|.+..-. .+|+...-.+..+..+..++.+...=-=.|+-||-.+
T Consensus 35 SiiLT~I~F~~V~~~~l~~~~~~~~I~~lAvvQi~VqL~yFLHm~~k~~~~~ 86 (110)
T TIGR02908 35 MIFLTLIAFFAVMLDEIDKWFVIPFILLLAAVQVAFQLYYFMHMKDKGHEVP 86 (110)
T ss_pred HHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHheeeCCCccchH
Confidence 45566666666544 6787777777888888888888876555555555433
No 293
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=41.45 E-value=2.2e+02 Score=24.15 Aligned_cols=27 Identities=15% Similarity=0.094 Sum_probs=13.2
Q ss_pred hHHhHHHHHHHHHHHHHHHHH-HHhhhh
Q 018940 289 ALVPAIIYICSFIVSILLQEM-AWTGQR 315 (348)
Q Consensus 289 ~~~~~~~~~~~i~g~~~~~~l-~r~g~r 315 (348)
..+.....++.+..-+..+.. ++.++|
T Consensus 153 ~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 153 ALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 344444555555554444543 454444
No 294
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=40.63 E-value=88 Score=20.46 Aligned_cols=24 Identities=29% Similarity=0.592 Sum_probs=15.8
Q ss_pred HHHHHhhhhhhHhhhcc-cCCchHHH
Q 018940 69 QIADGFATIFIGELIDR-FGHFKIWH 93 (348)
Q Consensus 69 ~i~~~i~~p~~G~l~Dr-~Grrr~~i 93 (348)
.....+.....|+..|| +|.+ |+.
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~-p~~ 34 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTS-PWF 34 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCC-hHH
Confidence 34445566789999996 5774 443
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.48 E-value=1.5e+02 Score=22.77 Aligned_cols=55 Identities=4% Similarity=-0.051 Sum_probs=29.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHHHHHHHH
Q 018940 158 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIF 220 (348)
Q Consensus 158 ~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ll~ 220 (348)
++.++...++.-..-.+++++.+...++++.-+.+ ...|. ++++.++++++.++.
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~ag------TsPwg--lIv~lllGf~AG~ln 91 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAG------TSPWG--LIVFLLLGFGAGVLN 91 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC------CCcHH--HHHHHHHHHHHHHHH
Confidence 34455666666556666666666555677765443 12342 344445566555554
No 296
>COG4137 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=39.78 E-value=2.8e+02 Score=24.80 Aligned_cols=29 Identities=14% Similarity=-0.049 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018940 300 FIVSILLQEMAWTGQRLKAYYSAGGVLWVF 329 (348)
Q Consensus 300 i~g~~~~~~l~r~g~r~k~~~~~g~~l~~v 329 (348)
+.+.++.|.. |.|.|.||+.++.+..++.
T Consensus 219 vfg~lL~Gh~-~~gWRG~kav~wtlag~~l 247 (265)
T COG4137 219 VFGGLLWGHY-RYGWRGRKAVWWTLAGFVL 247 (265)
T ss_pred HHHHHHHHHH-HhccCCceehhhHHHHHHH
Confidence 4445555543 6777777766666554433
No 297
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.55 E-value=1.4e+02 Score=31.12 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=40.2
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHH-HHHhhhhhhHhhhccc
Q 018940 29 YGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQI-ADGFATIFIGELIDRF 86 (348)
Q Consensus 29 ~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i-~~~i~~p~~G~l~Dr~ 86 (348)
..++.........-..+|+|.|+++. |.+++.+..+.....+ ..+++..+.|.+.-|+
T Consensus 397 ~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkf 456 (735)
T KOG3626|consen 397 VVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKF 456 (735)
T ss_pred HHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeee
Confidence 33444444444455569999999876 9999999988755544 4455667777888775
No 298
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=38.02 E-value=1e+02 Score=26.29 Aligned_cols=16 Identities=19% Similarity=0.129 Sum_probs=8.7
Q ss_pred HHHhhhhhhHHHHHHH
Q 018940 309 MAWTGQRLKAYYSAGG 324 (348)
Q Consensus 309 l~r~g~r~k~~~~~g~ 324 (348)
++|+|+..-+.+.+++
T Consensus 159 leryg~~l~p~v~I~L 174 (191)
T PF03596_consen 159 LERYGRWLVPIVYIGL 174 (191)
T ss_pred HHHhcccHHHHHHHHh
Confidence 3777776444444443
No 299
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=33.71 E-value=4.9e+02 Score=25.87 Aligned_cols=71 Identities=7% Similarity=0.057 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHHHHH
Q 018940 135 IFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGC 214 (348)
Q Consensus 135 ~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~ 214 (348)
..++.....+....+.+.+..++++|+....+-.+...++-.++...+++.++ ...||+....+.-++.+
T Consensus 291 ~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~ii----------r~~GW~~~AlitPiv~l 360 (491)
T PF03219_consen 291 AYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNII----------RRFGWRTAALITPIVIL 360 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHhhHHHHHHHhHHHHH
Confidence 45566667777777778887888877776665444333332222222222222 24577776655433333
Q ss_pred H
Q 018940 215 C 215 (348)
Q Consensus 215 ~ 215 (348)
+
T Consensus 361 i 361 (491)
T PF03219_consen 361 I 361 (491)
T ss_pred H
Confidence 3
No 300
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=33.02 E-value=76 Score=21.71 Aligned_cols=38 Identities=13% Similarity=0.256 Sum_probs=24.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccccc
Q 018940 247 FKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMG 284 (348)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~ 284 (348)
|+|+.+.+..+..++.-........|+-.|+....|..
T Consensus 2 f~nkklir~gltlfv~L~vi~FtigYfq~Yl~saagi~ 39 (73)
T PF13073_consen 2 FTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAGIK 39 (73)
T ss_pred CccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccCCe
Confidence 56777777665544444455556668888888776654
No 301
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=31.25 E-value=1.6e+02 Score=24.20 Aligned_cols=34 Identities=3% Similarity=-0.117 Sum_probs=20.9
Q ss_pred HHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHH
Q 018940 142 ATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANL 177 (348)
Q Consensus 142 ~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~ 177 (348)
..-+.|..+.+.. |+++.|.+.++-.+-.+.+-+
T Consensus 111 llGisYGilSaSW--D~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 111 LLGISYGILSASW--DPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHhhhhhhccccc--CCCCCCCcccHHHHHHhHHHH
Confidence 3334444444443 566678888888877777644
No 302
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=31.07 E-value=2.1e+02 Score=21.69 Aligned_cols=19 Identities=0% Similarity=-0.055 Sum_probs=11.6
Q ss_pred HhhhHHHHHHHhhcccccc
Q 018940 267 NVSQAYLAFYVINDLRMGQ 285 (348)
Q Consensus 267 ~~~~~~~~~yl~~~~~~~~ 285 (348)
.....++..|+.+..+-+.
T Consensus 56 il~G~~lG~WLD~~~~t~~ 74 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPF 74 (100)
T ss_pred HHHHHHHHHHHHhhcCCCc
Confidence 4455567777777666543
No 303
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=30.39 E-value=90 Score=28.66 Aligned_cols=66 Identities=14% Similarity=0.139 Sum_probs=30.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcccccchhhhHHhHH-HHHHHHHHHHHHHHHHHhhhh
Q 018940 245 YWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAI-IYICSFIVSILLQEMAWTGQR 315 (348)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~l~r~g~r 315 (348)
.-|||..+.. +.+...+-+.-..|. .|+-.++++.+.+.+.+..+ ..-..++|.+.....||.|||
T Consensus 36 nsFknnyllV----yslmmAgDWLQgPYv-YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRK 102 (454)
T KOG4332|consen 36 NSFKNNYLLV----YSLMMAGDWLQGPYV-YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRK 102 (454)
T ss_pred HHHhhhHHHH----HHHHHhhhhhcCcee-eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccc
Confidence 3466665442 333323333333332 24444556655444322222 222234455544445999999
No 304
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=29.29 E-value=2.4e+02 Score=27.28 Aligned_cols=65 Identities=17% Similarity=0.066 Sum_probs=41.0
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHHH
Q 018940 26 VLYYGSGHMLNDITAACWFTYLLLFLTDI-GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWHG 94 (348)
Q Consensus 26 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i~ 94 (348)
..+|.+..++....-. -...|..++ |-|-...+.--.+-....++..|+.|-..|+..|+|....
T Consensus 33 y~gy~lt~wgdR~W~F----~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~ 98 (503)
T KOG2601|consen 33 YLGYFLTTWGDRMWEF----SVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQT 98 (503)
T ss_pred hHHHHHhHhhHhHHHH----HHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHH
Confidence 4555555555443323 334555666 6555555544555556667789999999999999887644
No 305
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=27.15 E-value=2.5e+02 Score=21.55 Aligned_cols=43 Identities=26% Similarity=0.236 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHhh--CCChhHHHHHHHHHHHHHHhhhhhhHhhhcc
Q 018940 36 NDITAACWFTYLLLFLTDI--GLSPRGAAAVMLSGQIADGFATIFIGELIDR 85 (348)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~--g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr 85 (348)
+.+.++....++.|++.+. ++++...+.+.....+ +.|.++||
T Consensus 61 cAFGYGll~v~~tP~l~~~L~~~~~~~l~~~vl~~F~-------~iG~lAqR 105 (106)
T PF11872_consen 61 CAFGYGLLIVWLTPLLARQLAQLPNYWLAPVVLLSFI-------LIGVLAQR 105 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH-------HHHHHhcc
Confidence 4555556678888888773 7887766655444333 46777776
No 306
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=23.18 E-value=7.1e+02 Score=24.32 Aligned_cols=133 Identities=15% Similarity=0.082 Sum_probs=62.5
Q ss_pred HHHHHhhCCChhHHHHHHHHHHHHHHhhhhhhHhhhcc------cCCchHHHHHHHHHHHHHHHHHhcCcCCCcccCccc
Q 018940 48 LLFLTDIGLSPRGAAAVMLSGQIADGFATIFIGELIDR------FGHFKIWHGAGSVLVAVSFSSVFGGCMPCRILSTST 121 (348)
Q Consensus 48 ~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr------~Grrr~~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 121 (348)
+.=+.|.|+++.+.+++.....-...+.....|+++.+ +=|+-++ ..+.... ...+.|+ .|. +....+
T Consensus 289 ~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~-R~~~~~~--~t~Lv~~--~~~-~~~~~G 362 (510)
T KOG3574|consen 289 SLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPY-RLGGGLV--QTALVWW--TPT-LGHSDG 362 (510)
T ss_pred chHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhH-HHHHHHH--HHHHHhh--hcc-cccCCC
Confidence 33445669999999887754444545555555555441 2222222 2121111 1112222 231 111011
Q ss_pred chhHHHHHHHH---HHHHHHHHHHHHHhHhhhhhhcccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018940 122 LKVETISYCVF---AAIFNVGWAATQVAHMSMVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFS 188 (348)
Q Consensus 122 ~~~~~~~~~l~---~~~~~~~~~~~~~~~~a~~~~~~~~~~~R~~~~~~~~~~~~ig~~~~~~~~~~~~~ 188 (348)
.. ..-.+++. ..+.+.......+..++.-+.++ ||.-.+..+++.+...++|+.--.-+...+.+
T Consensus 363 ~~-~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqis-dp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 363 TF-PRGYYILLITSYAFHQVFVTSMFVSGMAFHAQIS-DPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred ce-eechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcC-CcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 11 01111111 12344444455555666666666 56667888888888888876543333333433
No 307
>PF00032 Cytochrom_B_C: Cytochrome b(C-terminal)/b6/petD; InterPro: IPR005798 In the mitochondrion of eukaryotes and in aerobic prokaryotes, cytochrome b is a component of respiratory chain complex III (1.10.2.2 from EC) - also known as the bc1 complex or ubiquinol-cytochrome c reductase. In plant chloroplasts and cyanobacteria, there is a analogous protein, cytochrome b6, a component of the plastoquinone-plastocyanin reductase (1.10.99.1 from EC), also known as the b6f complex. Cytochrome b/b6 [, ] is an integral membrane protein of approximately 400 amino acid residues that probably has 8 transmembrane segments. In plants and cyanobacteria, cytochrome b6 consists of two subunits encoded by the petB and petD genes. The sequence of petB is colinear with the N-terminal part of mitochondrial cytochrome b, while petD corresponds to the C-terminal part. Cytochrome b/b6 non-covalently binds two haem groups, known as b562 and b566. Four conserved histidine residues are postulated to be the ligands of the iron atoms of these two haem groups. Apart from regions around some of the histidine haem ligands, there are a few conserved regions in the sequence of b/b6. The best conserved of these regions includes an invariant P-E-W triplet which lies in the loop that separates the fifth and sixth transmembrane segments. It seems to be important for electron transfer at the ubiquinone redox site - called Qz or Qo (where o stands for outside) - located on the outer side of the membrane. This entry is the C terminus of these proteins.; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0016020 membrane; PDB: 2E76_B 2D2C_B 1VF5_B 2E74_B 2E75_B 2ZT9_B 2YIU_D 1Q90_D 1ZRT_C 1PPJ_P ....
Probab=20.63 E-value=3.5e+02 Score=20.20 Aligned_cols=39 Identities=13% Similarity=0.077 Sum_probs=22.1
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhhhHhhhcccCCchHHH
Q 018940 55 GLSPRGAAAVMLSGQIADGFATIFIGELIDRFGHFKIWH 93 (348)
Q Consensus 55 g~s~~~~g~i~~~~~i~~~i~~p~~G~l~Dr~Grrr~~i 93 (348)
-+++...|.+.....+...+.-|..-+-..|-.++|+..
T Consensus 26 ~ip~k~~Gv~~~~~~~~~l~~lP~ld~~~~~~~~~rp~~ 64 (102)
T PF00032_consen 26 SIPNKLGGVIAMGLSILILFLLPFLDRSPVRSPRFRPIF 64 (102)
T ss_dssp HSSSHHHHHHHHHHHHHHHHTHHHHTSCSSSSCGGSHHH
T ss_pred ecccccceeeecchhhhhHHHHHhhcchhhhhhhhcccc
Confidence 456666787777666666665565443333434445544
Done!