Query 018943
Match_columns 348
No_of_seqs 147 out of 794
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 05:22:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018943.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018943hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05653 Mg_trans_NIPA: Magnes 100.0 5.8E-62 1.3E-66 466.9 22.0 298 2-318 3-300 (300)
2 KOG2922 Uncharacterized conser 100.0 8.2E-62 1.8E-66 456.6 14.0 304 1-323 16-319 (335)
3 PRK02971 4-amino-4-deoxy-L-ara 99.1 3.4E-10 7.4E-15 96.1 8.7 116 6-126 2-121 (129)
4 TIGR03340 phn_DUF6 phosphonate 99.1 3.3E-08 7.2E-13 93.9 21.6 262 8-308 3-281 (281)
5 PRK15051 4-amino-4-deoxy-L-ara 98.7 6.6E-08 1.4E-12 80.0 9.4 101 10-125 5-107 (111)
6 TIGR00776 RhaT RhaT L-rhamnose 98.7 1.3E-06 2.8E-11 83.8 18.2 224 57-311 58-289 (290)
7 PRK11453 O-acetylserine/cystei 98.7 3.2E-06 7E-11 81.1 19.7 206 70-310 74-287 (299)
8 PF06027 DUF914: Eukaryotic pr 98.6 4.4E-06 9.6E-11 81.7 20.0 77 52-128 74-152 (334)
9 PRK15430 putative chlorampheni 98.6 1.7E-05 3.6E-10 76.1 23.2 122 1-126 3-144 (296)
10 TIGR00950 2A78 Carboxylate/Ami 98.6 1E-05 2.2E-10 75.2 20.2 206 58-305 50-259 (260)
11 PLN00411 nodulin MtN21 family 98.5 8.8E-06 1.9E-10 80.5 18.0 224 68-318 91-336 (358)
12 PF10639 UPF0546: Uncharacteri 98.4 1.9E-07 4.2E-12 77.2 4.4 105 17-125 7-112 (113)
13 COG2510 Predicted membrane pro 98.4 1.3E-06 2.9E-11 73.2 9.4 115 9-126 6-138 (140)
14 TIGR00817 tpt Tpt phosphate/ph 98.4 2.5E-05 5.4E-10 74.8 18.2 66 58-124 69-134 (302)
15 PRK11272 putative DMT superfam 98.3 5.4E-05 1.2E-09 72.3 18.7 212 59-313 73-288 (292)
16 PRK11689 aromatic amino acid e 98.3 5.9E-05 1.3E-09 72.2 18.8 212 61-310 67-287 (295)
17 PRK10532 threonine and homoser 98.3 0.00039 8.4E-09 66.6 23.6 263 5-314 11-285 (293)
18 COG0697 RhaT Permeases of the 98.3 0.00022 4.8E-09 66.4 21.1 212 59-311 74-288 (292)
19 PF08449 UAA: UAA transporter 98.2 0.00049 1.1E-08 66.2 22.8 228 58-310 68-297 (303)
20 PF13536 EmrE: Multidrug resis 98.2 3.5E-06 7.7E-11 69.4 6.2 66 61-127 41-106 (113)
21 PRK10452 multidrug efflux syst 98.1 4E-05 8.6E-10 64.3 10.3 96 12-128 8-104 (120)
22 PTZ00343 triose or hexose phos 98.0 0.00091 2E-08 65.9 21.2 68 58-126 118-185 (350)
23 PF06800 Sugar_transport: Suga 98.0 0.00047 1E-08 65.5 16.8 217 57-307 44-268 (269)
24 PRK09541 emrE multidrug efflux 98.0 7.5E-05 1.6E-09 61.7 9.8 95 11-127 7-103 (110)
25 PF00893 Multi_Drug_Res: Small 97.7 0.00021 4.5E-09 57.1 8.9 85 12-118 7-93 (93)
26 PF04142 Nuc_sug_transp: Nucle 97.7 0.00091 2E-08 62.8 13.6 68 60-127 22-89 (244)
27 TIGR00688 rarD rarD protein. T 97.7 0.0081 1.8E-07 56.0 19.7 62 65-126 80-141 (256)
28 PRK10532 threonine and homoser 97.7 0.00021 4.5E-09 68.4 9.0 126 5-131 147-285 (293)
29 COG2510 Predicted membrane pro 97.6 0.00022 4.8E-09 60.1 7.8 114 190-311 4-140 (140)
30 PRK13499 rhamnose-proton sympo 97.6 0.0025 5.5E-08 62.7 16.3 299 3-310 4-341 (345)
31 PF00892 EamA: EamA-like trans 97.4 0.00052 1.1E-08 55.7 7.5 68 58-125 57-124 (126)
32 TIGR00950 2A78 Carboxylate/Ami 97.4 0.0011 2.3E-08 61.6 10.1 118 4-122 126-259 (260)
33 PLN00411 nodulin MtN21 family 97.4 0.00081 1.8E-08 66.6 9.1 117 4-126 187-327 (358)
34 PRK10650 multidrug efflux syst 97.4 0.0024 5.3E-08 52.6 10.4 97 7-125 8-106 (109)
35 PRK11431 multidrug efflux syst 97.2 0.0033 7.1E-08 51.5 9.4 67 59-125 33-100 (105)
36 PRK11689 aromatic amino acid e 97.1 0.0026 5.6E-08 60.9 8.9 113 5-125 155-285 (295)
37 PRK11272 putative DMT superfam 97.1 0.0029 6.2E-08 60.5 9.2 114 5-125 149-283 (292)
38 KOG4510 Permease of the drug/m 97.0 0.0018 3.8E-08 61.2 7.0 217 67-316 109-331 (346)
39 COG2076 EmrE Membrane transpor 97.0 0.0079 1.7E-07 49.3 9.4 68 58-125 32-101 (106)
40 PRK15051 4-amino-4-deoxy-L-ara 97.0 0.014 3E-07 48.2 11.1 80 225-311 31-110 (111)
41 PRK11453 O-acetylserine/cystei 96.8 0.0078 1.7E-07 57.7 9.5 121 5-125 142-285 (299)
42 TIGR03340 phn_DUF6 phosphonate 96.7 0.0015 3.2E-08 62.1 4.0 119 6-124 144-280 (281)
43 KOG2234 Predicted UDP-galactos 96.6 0.046 9.9E-07 53.5 13.5 70 57-126 94-163 (345)
44 PRK02971 4-amino-4-deoxy-L-ara 96.6 0.049 1.1E-06 46.2 11.9 69 240-314 57-126 (129)
45 PRK10452 multidrug efflux syst 96.3 0.06 1.3E-06 45.2 10.4 67 243-315 42-108 (120)
46 PRK09541 emrE multidrug efflux 96.2 0.023 5E-07 46.9 7.8 81 224-313 26-106 (110)
47 COG2962 RarD Predicted permeas 96.2 0.33 7.1E-06 46.6 16.2 77 49-125 62-142 (293)
48 PRK10650 multidrug efflux syst 95.8 0.1 2.2E-06 43.1 9.8 76 224-308 31-106 (109)
49 COG0697 RhaT Permeases of the 95.8 0.019 4.2E-07 53.2 6.2 119 5-125 153-285 (292)
50 PRK11431 multidrug efflux syst 95.8 0.11 2.3E-06 42.6 9.5 77 224-309 25-101 (105)
51 PRK15430 putative chlorampheni 95.7 0.019 4.2E-07 54.9 6.0 62 66-127 224-285 (296)
52 TIGR00776 RhaT RhaT L-rhamnose 95.4 0.036 7.8E-07 53.1 6.6 115 5-126 151-287 (290)
53 KOG3912 Predicted integral mem 94.6 0.32 7E-06 46.5 10.2 70 59-128 90-159 (372)
54 PF00893 Multi_Drug_Res: Small 94.3 0.34 7.4E-06 38.5 8.5 64 225-293 26-89 (93)
55 PF03151 TPT: Triose-phosphate 94.3 0.29 6.3E-06 41.4 8.7 58 67-124 93-150 (153)
56 PF13536 EmrE: Multidrug resis 94.3 0.53 1.1E-05 38.4 9.9 63 245-315 49-111 (113)
57 PF06800 Sugar_transport: Suga 94.2 0.23 4.9E-06 47.4 8.3 67 249-317 63-129 (269)
58 COG2076 EmrE Membrane transpor 93.8 0.24 5.2E-06 40.6 6.7 77 225-310 27-103 (106)
59 PF06027 DUF914: Eukaryotic pr 93.8 0.4 8.7E-06 47.2 9.5 127 3-129 165-307 (334)
60 KOG1583 UDP-N-acetylglucosamin 93.8 2.4 5.3E-05 40.6 14.1 78 55-132 64-142 (330)
61 KOG2765 Predicted membrane pro 93.2 0.4 8.6E-06 47.6 8.2 60 73-132 177-236 (416)
62 PF00892 EamA: EamA-like trans 91.4 0.34 7.3E-06 38.9 4.6 58 245-309 68-125 (126)
63 PF05653 Mg_trans_NIPA: Magnes 91.3 1.2 2.7E-05 43.0 9.2 119 188-317 6-129 (300)
64 TIGR00803 nst UDP-galactose tr 91.3 1.2 2.6E-05 40.5 8.7 121 4-124 83-221 (222)
65 TIGR00817 tpt Tpt phosphate/ph 90.6 0.23 5E-06 47.4 3.3 55 70-124 236-290 (302)
66 KOG1441 Glucose-6-phosphate/ph 90.1 2 4.4E-05 41.9 9.4 62 65-126 93-154 (316)
67 PF06379 RhaT: L-rhamnose-prot 89.8 20 0.00043 35.4 15.8 235 67-309 85-339 (344)
68 KOG4831 Unnamed protein [Funct 89.6 0.14 3.1E-06 41.8 0.8 77 49-126 46-124 (125)
69 PF10639 UPF0546: Uncharacteri 88.9 1.8 4E-05 35.9 7.0 53 249-307 59-111 (113)
70 KOG4314 Predicted carbohydrate 88.3 18 0.0004 33.2 13.4 60 68-127 66-125 (290)
71 COG5006 rhtA Threonine/homoser 87.1 1.6 3.6E-05 41.2 6.2 121 3-127 145-282 (292)
72 COG1742 Uncharacterized conser 87.1 4.2 9.2E-05 33.2 7.7 48 83-131 60-107 (109)
73 COG4975 GlcU Putative glucose 85.3 0.47 1E-05 44.6 1.7 62 250-313 78-139 (288)
74 COG5006 rhtA Threonine/homoser 85.1 36 0.00078 32.5 18.9 62 248-313 227-288 (292)
75 PRK13499 rhamnose-proton sympo 82.0 6.1 0.00013 39.1 8.0 69 241-310 84-153 (345)
76 PRK02237 hypothetical protein; 81.9 5.9 0.00013 32.6 6.5 47 84-131 62-108 (109)
77 KOG1581 UDP-galactose transpor 81.1 13 0.00029 36.1 9.6 74 58-132 87-160 (327)
78 PF08449 UAA: UAA transporter 80.7 6.9 0.00015 37.5 7.8 121 4-124 152-294 (303)
79 PF02694 UPF0060: Uncharacteri 80.6 5 0.00011 32.9 5.7 47 84-131 60-106 (107)
80 COG4975 GlcU Putative glucose 80.2 1.6 3.4E-05 41.2 3.0 74 56-129 57-138 (288)
81 PTZ00343 triose or hexose phos 79.8 3.8 8.2E-05 40.3 5.8 50 75-124 296-345 (350)
82 COG3169 Uncharacterized protei 74.8 21 0.00045 29.0 7.5 105 1-124 5-112 (116)
83 KOG2765 Predicted membrane pro 74.5 14 0.0003 37.0 7.9 124 4-127 245-390 (416)
84 KOG2766 Predicted membrane pro 73.9 2 4.4E-05 40.8 1.9 57 73-129 96-152 (336)
85 PF04142 Nuc_sug_transp: Nucle 71.7 41 0.00089 31.5 10.2 112 4-117 112-243 (244)
86 PF04657 DUF606: Protein of un 69.0 50 0.0011 28.1 9.3 65 59-123 68-137 (138)
87 KOG2922 Uncharacterized conser 68.8 2.3 4.9E-05 41.5 1.0 128 189-332 21-153 (335)
88 KOG1580 UDP-galactose transpor 67.2 1.2E+02 0.0025 28.9 12.6 65 60-128 90-158 (337)
89 PF01306 LacY_symp: LacY proto 59.9 2E+02 0.0044 29.2 13.8 76 83-158 142-230 (412)
90 PF04342 DUF486: Protein of un 56.1 10 0.00022 31.1 2.5 35 90-124 71-105 (108)
91 PF15048 OSTbeta: Organic solu 56.0 8.8 0.00019 32.3 2.2 28 283-310 29-56 (125)
92 COG2962 RarD Predicted permeas 44.4 1.2E+02 0.0026 29.4 8.1 97 225-325 66-182 (293)
93 KOG1442 GDP-fucose transporter 41.9 3.5 7.5E-05 39.6 -2.6 60 64-123 111-170 (347)
94 PF06609 TRI12: Fungal trichot 38.6 3.6E+02 0.0078 28.9 11.4 57 51-108 103-160 (599)
95 KOG1580 UDP-galactose transpor 37.3 26 0.00057 33.1 2.4 40 92-131 278-317 (337)
96 PF07857 DUF1632: CEO family ( 36.9 3E+02 0.0064 26.1 9.5 166 56-248 56-243 (254)
97 COG4858 Uncharacterized membra 36.5 1.5E+02 0.0033 27.0 7.0 89 6-110 125-219 (226)
98 PF11970 Git3_C: G protein-cou 35.5 68 0.0015 24.6 4.1 49 257-305 13-61 (76)
99 COG5522 Predicted integral mem 35.1 1.2E+02 0.0027 28.0 6.3 51 67-117 102-161 (236)
100 PF00909 Ammonium_transp: Ammo 33.1 2.8E+02 0.006 27.8 9.2 36 247-282 294-329 (399)
101 PF11368 DUF3169: Protein of u 31.5 4.3E+02 0.0092 24.5 11.3 19 188-206 9-27 (248)
102 KOG1441 Glucose-6-phosphate/ph 31.3 75 0.0016 31.1 4.6 29 3-31 160-188 (316)
103 PF03189 Otopetrin: Otopetrin; 30.0 6.2E+02 0.013 25.9 16.1 66 227-313 345-410 (441)
104 PF11297 DUF3098: Protein of u 29.3 83 0.0018 23.8 3.5 29 287-315 4-32 (69)
105 TIGR00688 rarD rarD protein. T 28.6 1.7E+02 0.0037 26.8 6.5 34 249-283 88-121 (256)
106 TIGR02106 cyd_oper_ybgT cyd op 28.0 83 0.0018 19.9 2.8 20 3-22 5-24 (30)
107 PF08173 YbgT_YccB: Membrane b 27.2 89 0.0019 19.4 2.8 19 3-21 5-23 (28)
108 PF04211 MtrC: Tetrahydrometha 25.2 3.7E+02 0.0079 25.6 7.8 135 60-205 75-217 (262)
109 PRK01030 tetrahydromethanopter 24.7 4.7E+02 0.01 24.9 8.4 138 60-209 68-214 (264)
110 TIGR01148 mtrC N5-methyltetrah 23.9 5.2E+02 0.011 24.6 8.5 138 60-209 75-220 (265)
111 PRK14749 hypothetical protein; 23.9 1.7E+02 0.0037 18.5 3.6 20 3-22 5-24 (30)
112 KOG0682 Ammonia permease [Inor 23.7 4.7E+02 0.01 27.3 8.8 96 229-324 310-429 (500)
113 KOG3491 Predicted membrane pro 22.5 2.1E+02 0.0046 21.0 4.4 20 57-76 39-60 (65)
114 COG1279 Lysine efflux permease 22.5 2.3E+02 0.005 26.0 5.8 70 236-308 14-88 (202)
115 TIGR00803 nst UDP-galactose tr 22.4 5.6E+02 0.012 22.8 12.6 56 244-306 165-220 (222)
116 PF06570 DUF1129: Protein of u 22.0 4.8E+02 0.01 23.4 7.9 55 56-110 144-204 (206)
117 PF07332 DUF1469: Protein of u 21.9 1.4E+02 0.0031 24.2 4.1 32 278-309 61-92 (121)
118 COG3817 Predicted membrane pro 20.7 1.4E+02 0.003 28.6 4.0 44 273-316 108-153 (313)
No 1
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=5.8e-62 Score=466.93 Aligned_cols=298 Identities=31% Similarity=0.529 Sum_probs=269.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhhhhh
Q 018943 2 GEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQ 81 (348)
Q Consensus 2 ~~~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~w~~G~~~~~~g~~~~~~al~~~p~ 81 (348)
.+|++|+.+|++||++++.|.++|||+|.|+++.+.++ .+..++++|||+||.|+.++++|++++++||+++|+
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~------~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~ 76 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA------GSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPA 76 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc------cchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhH
Confidence 46889999999999999999999999999887533221 123457899999999999999999999999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCCCCCCChHHHHHHhcchhHHHHHHHHHHHH
Q 018943 82 SLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFIV 161 (348)
Q Consensus 82 slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~i~ 161 (348)
++|||++++++++|++++++++|||++++|+.|++++++|+++++.++|++++.+|.+|+.+++.+|.|+.|+.+..+..
T Consensus 77 slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~ 156 (300)
T PF05653_consen 77 SLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLI 156 (300)
T ss_pred HHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877655
Q ss_pred HHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHH
Q 018943 162 AIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTA 241 (348)
Q Consensus 162 ~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K~~~~~l~~~~~g~~~~~~~~~y~ll~~~~~~~ 241 (348)
+.+.+..+++ .|+ .+.+.|..+||++|++|++++|++++.++++++|++||.+|.+|.++++++.++
T Consensus 157 ~~L~~~~~~r------~g~-------~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~ 223 (300)
T PF05653_consen 157 LILIFFIKPR------YGR-------RNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTA 223 (300)
T ss_pred HHHHHhhcch------hcc-------cceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHH
Confidence 4443332211 122 235778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCCCCCccc
Q 018943 242 GFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDESKGILM 318 (348)
Q Consensus 242 l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~~~~~~ 318 (348)
+.|++||||||++||++.++|+||++||++++++|+++|||++++++++++++.+|+.+++.||++|++++++++.+
T Consensus 224 ~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~~~ 300 (300)
T PF05653_consen 224 VLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEISQ 300 (300)
T ss_pred HHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988753
No 2
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=8.2e-62 Score=456.65 Aligned_cols=304 Identities=24% Similarity=0.401 Sum_probs=280.5
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhhhh
Q 018943 1 MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAA 80 (348)
Q Consensus 1 m~~~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~w~~G~~~~~~g~~~~~~al~~~p 80 (348)
+++|++|+++|+.||++++.+.+++||+|+|.+....++.. .+ .++++.|+||+|++.|++|++.||+||+|||
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~--gg----~~yl~~~~Ww~G~ltm~vGei~NFaAYaFAP 89 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGE--GG----YGYLKEPLWWAGMLTMIVGEIANFAAYAFAP 89 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccC--CC----cchhhhHHHHHHHHHHHHHhHhhHHHHhhch
Confidence 46899999999999999999999999999998764433322 23 3456779999999999999999999999999
Q ss_pred hHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCCCCCCChHHHHHHhcchhHHHHHHHHHHH
Q 018943 81 QSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVYCLILIFI 160 (348)
Q Consensus 81 ~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~i 160 (348)
+++|+|||++++++|.++|++++||+++..+.+||+++++|.+++|.++|++++..|++|+.+++++|.|++|+.+.+++
T Consensus 90 asLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~ 169 (335)
T KOG2922|consen 90 ASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILI 169 (335)
T ss_pred HhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHH
Q 018943 161 VAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSMLLLFFST 240 (348)
Q Consensus 161 ~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K~~~~~l~~~~~g~~~~~~~~~y~ll~~~~~~ 240 (348)
++++++.++.+ +|++ ..+.|..+|+++|++|++++|+++++++.+++|++|+.+|.+|.++.+++.+
T Consensus 170 ~~il~~~~~p~------~g~t-------nilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~ 236 (335)
T KOG2922|consen 170 VLILIFFYAPR------YGQT-------NILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATC 236 (335)
T ss_pred HHHHheeeccc------cccc-------ceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHH
Confidence 77766555432 2433 3799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCCCCCccchh
Q 018943 241 AGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDESKGILMSS 320 (348)
Q Consensus 241 ~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~~~~~~~~ 320 (348)
+.+|++||||||++||++++.|+||++||+.++++|.|+|+||++++..+..++.+|+..++.|+++|.++++.++..++
T Consensus 237 ~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~~s 316 (335)
T KOG2922|consen 237 VSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISLAS 316 (335)
T ss_pred HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred hhH
Q 018943 321 LLR 323 (348)
Q Consensus 321 ~~~ 323 (348)
..+
T Consensus 317 ~~~ 319 (335)
T KOG2922|consen 317 YNS 319 (335)
T ss_pred ccc
Confidence 665
No 3
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=99.10 E-value=3.4e-10 Score=96.08 Aligned_cols=116 Identities=16% Similarity=0.112 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccc--hhHHHHHHHHHHHHHHHHHHhhhhhHH
Q 018943 6 IGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYH--SWRVGILVFLLGNCLNFISFGYAAQSL 83 (348)
Q Consensus 6 iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p--~w~~G~~~~~~g~~~~~~al~~~p~sl 83 (348)
+|.++.+.+.++.+.||.+.|++..+.+..+. . ...........+| .-+.|+.++++++++|..++...|++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~---~--~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~aL~~~~ls~ 76 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSH---A--WDFIAALLAFGLALRAVLLGLAGYALSMLCWLKALRYLPLSR 76 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccc---h--hHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCcHH
Confidence 36788899999999999999999876532110 0 0000011235567 778999999999999999999999999
Q ss_pred HhhhhhhHHHHHHHHHHH--HhccccchhhhhHHHHhhhcceeEE
Q 018943 84 LAALGSVQFVSNIAFSYF--VFNKMVTVKVLVATAFIVLGNIFLV 126 (348)
Q Consensus 84 v~Pl~~~~lv~~~~~s~~--~l~e~~~~~~~~g~~li~~G~~~iv 126 (348)
..|+-+..+++..+.+.. ++||+++..++.|+++|++|+.++.
T Consensus 77 Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 77 AYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999999998888888885 7999999999999999999988754
No 4
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.06 E-value=3.3e-08 Score=93.92 Aligned_cols=262 Identities=11% Similarity=0.040 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCC---------C----CCCccccccccccchh---HHHHHHHHHHHHH
Q 018943 8 AFINLVGSIAINFGTNLLKLGHIEREKHSTLDSD---------G----TNGKHSLKPIVHYHSW---RVGILVFLLGNCL 71 (348)
Q Consensus 8 v~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~---------~----~~~~~~~~~~l~~p~w---~~G~~~~~~g~~~ 71 (348)
.++.+.++++.|..+.+.|+...++..- ..-. . .......+ ..++..| ..+.........+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 79 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWS-RLPATFWLLLAISAVANMVYFLG 79 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCC-CcchhhHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999664432110 0000 0 00000001 0111122 2233334566777
Q ss_pred HHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCCCCCCChHHHHHHhcchhHH
Q 018943 72 NFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFL 151 (348)
Q Consensus 72 ~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t~~el~~~~~~~~fl 151 (348)
...++...|.+..+|+...+-+++.+++.+++|||+++++|.|.++++.|+.++.. +. ....+ +.-.
T Consensus 80 ~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~--~~-~~~~~----------~~g~ 146 (281)
T TIGR03340 80 LAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL--SR-FAQHR----------RKAY 146 (281)
T ss_pred HHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc--cc-ccccc----------hhHH
Confidence 78899999999999999999999999999999999999999999999999887543 21 11111 1111
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCcc-chhHHH
Q 018943 152 VYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQ-LHSWFT 230 (348)
Q Consensus 152 ~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K~~~~~l~~~~~g~~~-~~~~~~ 230 (348)
.+.....+.........|+.+. + .++.. ....+...+-+.++.-..... ... ++... ...+..
T Consensus 147 ~~~l~aal~~a~~~i~~k~~~~-----~-~~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~ 210 (281)
T TIGR03340 147 AWALAAALGTAIYSLSDKAAAL-----G-VPAFY---SALGYLGIGFLAMGWPFLLLY----LKR---HGRSMFPYARQI 210 (281)
T ss_pred HHHHHHHHHHHHhhhhcccccc-----c-hhccc---ccHHHHHHHHHHHHHHHHHHH----HHH---hccchhhhHHHH
Confidence 1111111111111111222110 0 00000 111111111111111110100 000 11111 111222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhc
Q 018943 231 YSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLL 308 (348)
Q Consensus 231 y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lL 308 (348)
+.++.........-..+.++++++.|++.+.|..|. .++++++.|.++++|..+ .. ...|.++++.|++++
T Consensus 211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l-~pv~a~l~g~~~lgE~~~--~~----~~iG~~lil~Gv~l~ 281 (281)
T TIGR03340 211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNT-SIVFAVVLGIWFLNERWY--LT----RLMGVCIIVAGLVVL 281 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeeccc-HHHHHHHHHHHHhCCCcc--HH----HHHHHHHHHHhHHhC
Confidence 222222223333333456899999999999999876 589999999999999643 22 346777788888764
No 5
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.74 E-value=6.6e-08 Score=79.96 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccchhHHHH--HHHHHHHHHHHHHHhhhhhHHHhhh
Q 018943 10 INLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGI--LVFLLGNCLNFISFGYAAQSLLAAL 87 (348)
Q Consensus 10 lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~w~~G~--~~~~~g~~~~~~al~~~p~slv~Pl 87 (348)
.-+++.++-..|+.+.|++.+..+ . +.... ++..+.+. ..+.++..++..++...|.+..+|+
T Consensus 5 ~l~~ai~~ev~g~~~lK~s~~~~~----~------~~~~~-----~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~ 69 (111)
T PRK15051 5 TLVFASLLSVAGQLCQKQATRPVA----I------GKRRK-----HIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPM 69 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC----c------chhhh-----HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHH
Confidence 445667788889999999844221 0 11011 12334444 6688999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 88 GSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 88 ~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
.+++++++.+.+.+++|||++.+++.|.++++.|+.++
T Consensus 70 ~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 70 LSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998764
No 6
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.69 E-value=1.3e-06 Score=83.78 Aligned_cols=224 Identities=14% Similarity=0.088 Sum_probs=134.6
Q ss_pred hhHHHHHH---HHHHHHHHHHHHhhhhhHHHhhhhh-hHHHHHHHHHHHHhccccchhh----hhHHHHhhhcceeEEee
Q 018943 57 SWRVGILV---FLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMVTVKV----LVATAFIVLGNIFLVSF 128 (348)
Q Consensus 57 ~w~~G~~~---~~~g~~~~~~al~~~p~slv~Pl~~-~~lv~~~~~s~~~l~e~~~~~~----~~g~~li~~G~~~iv~~ 128 (348)
.|..|++. ...|+++.+.|.....+++-.|+.. ++++++.+.+.+++||+.++++ +.|.++++.|+.++...
T Consensus 58 ~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~ 137 (290)
T TIGR00776 58 IFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS 137 (290)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence 45557766 8899999999999999999999999 8999999999999999999999 99999999998876543
Q ss_pred cCCCCCCCChHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHH
Q 018943 129 GNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFA 208 (348)
Q Consensus 129 ~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~ 208 (348)
.++ +...++.. ..+.=+.+..+..+..+......|.-+ .+|. ...+....|++.+-.+.+.
T Consensus 138 ~~~---~~~~~~~~---~~~~Gi~~~l~sg~~y~~~~~~~~~~~--------~~~~-----~~~~~~~~g~~~~~~~~~~ 198 (290)
T TIGR00776 138 KDK---SAGIKSEF---NFKKGILLLLMSTIGYLVYVVVAKAFG--------VDGL-----SVLLPQAIGMVIGGIIFNL 198 (290)
T ss_pred ccc---cccccccc---chhhHHHHHHHHHHHHHHHHHHHHHcC--------CCcc-----eehhHHHHHHHHHHHHHHH
Confidence 211 11111100 111112222222211111111223211 0011 1222233343333333332
Q ss_pred HHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCCh
Q 018943 209 KSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDA 288 (348)
Q Consensus 209 K~~~~~l~~~~~g~~~~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~ 288 (348)
.-. + .. .+.....+..++..+.. ..+..+...+++.+......++.....++++.+.|..+++|.. ++
T Consensus 199 ~~~----~---~~--~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~--~~ 266 (290)
T TIGR00776 199 GHI----L---AK--PLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKK--TK 266 (290)
T ss_pred HHh----c---cc--chHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCC--Cc
Confidence 210 1 11 11222223223333333 4444444577774444455666666779999999999999975 56
Q ss_pred HHHHHHHHHHHHHHHhhhhccCC
Q 018943 289 LRATMFILGTASVFIGISLLAPD 311 (348)
Q Consensus 289 ~~~~~~~~G~~vi~~GV~lLs~~ 311 (348)
.++..+.+|+.+++.|+.+.+-.
T Consensus 267 ~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 267 REMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred ceeehhHHHHHHHHHHHHHHhcc
Confidence 78888999999999999987643
No 7
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.65 E-value=3.2e-06 Score=81.05 Aligned_cols=206 Identities=15% Similarity=0.169 Sum_probs=111.9
Q ss_pred HHHHHHHhh-hhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCCCCCCChHHHHHHhcch
Q 018943 70 CLNFISFGY-AAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNI 148 (348)
Q Consensus 70 ~~~~~al~~-~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t~~el~~~~~~~ 148 (348)
.+.+.++.+ .|.+..+-+....-+++.+++++++|||++++++.|.++..+|+.++.. +..+ ..+.+ ..
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~--~~~~-~~~~~-------~~ 143 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE--DSLN-GQHVA-------ML 143 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc--ccCC-Ccchh-------HH
Confidence 344566666 4777777777777789999999999999999999999999999887542 2111 11110 01
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCc-----
Q 018943 149 TFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGY----- 223 (348)
Q Consensus 149 ~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K~~~~~l~~~~~g~~----- 223 (348)
.. .+.....+.........|+.. ++++... .+.+......+++.-... .+ ... ++.+
T Consensus 144 G~-~l~l~aal~~a~~~v~~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~---~~-~~~---~~~~~~~~~ 205 (299)
T PRK11453 144 GF-MLTLAAAFSWACGNIFNKKIM-------SHSTRPA---VMSLVVWSALIPIIPFFV---AS-LIL---DGSATMIHS 205 (299)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHh-------cccCccc---hhHHHHHHHHHHHHHHHH---HH-HHh---cCchhhhhh
Confidence 11 111111111111111223211 0001111 122222222222211110 00 000 1110
Q ss_pred -cchhHHHHH-HHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHH
Q 018943 224 -QLHSWFTYS-MLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASV 301 (348)
Q Consensus 224 -~~~~~~~y~-ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi 301 (348)
...++..+. ++...+.+...+....++++++.++..+.++ ....|+++.+.|.++++|.. +.. ..+|..++
T Consensus 206 ~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~-~~l~Pv~a~~~~~l~lgE~~--~~~----~~iG~~lI 278 (299)
T PRK11453 206 LVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPL-SLLVPVVGLASAALLLDERL--TGL----QFLGAVLI 278 (299)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHHHHHHHhCCCc--cHH----HHHHHHHH
Confidence 011233332 3333445556666667999999999887775 55889999999999999964 333 34677778
Q ss_pred HHhhhhccC
Q 018943 302 FIGISLLAP 310 (348)
Q Consensus 302 ~~GV~lLs~ 310 (348)
+.|+++...
T Consensus 279 ~~gv~l~~~ 287 (299)
T PRK11453 279 MAGLYINVF 287 (299)
T ss_pred HHHHHHHhc
Confidence 888877653
No 8
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.63 E-value=4.4e-06 Score=81.70 Aligned_cols=77 Identities=12% Similarity=0.253 Sum_probs=65.7
Q ss_pred ccccchhHHHHH--HHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEee
Q 018943 52 IVHYHSWRVGIL--VFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSF 128 (348)
Q Consensus 52 ~l~~p~w~~G~~--~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~ 128 (348)
.+++|.|.-=+. +.+.|+.+...||.+.+.+-++=+.+.++++++++|.++||||.++.+++|+++++.|+.+++..
T Consensus 74 ~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s 152 (334)
T PF06027_consen 74 VLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS 152 (334)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence 355666643332 34688888999999999999999999999999999999999999999999999999998876553
No 9
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.61 E-value=1.7e-05 Score=76.08 Aligned_cols=122 Identities=10% Similarity=-0.012 Sum_probs=86.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccccC----------------CCCCCCCCccccccccccchh----HH
Q 018943 1 MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHST----------------LDSDGTNGKHSLKPIVHYHSW----RV 60 (348)
Q Consensus 1 m~~~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~p~w----~~ 60 (348)
|.....|.+++++++++.+.....-|... +.+..+. .-++ +.+..++..+++.+ ..
T Consensus 3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~~-~~~~~~~~~~R~~~a~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 78 (296)
T PRK15430 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIY-YVPADEILTHRVIWSFFFMVVLMSICR---QWSYLKTLIQTPQKIFMLAV 78 (296)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHc---cHHHHHHHHcCHHHHHHHHH
Confidence 56667789999999999888888887542 1100000 0000 00000000112222 25
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEE
Q 018943 61 GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV 126 (348)
Q Consensus 61 G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv 126 (348)
|...+.++..+.+.++...|.+...-+....=++..+++++++|||+++++|.|.++...|+.++.
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 556677788999999999999999999999989999999999999999999999999999998753
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.58 E-value=1e-05 Score=75.21 Aligned_cols=206 Identities=16% Similarity=0.122 Sum_probs=118.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCCCCCCC
Q 018943 58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYT 137 (348)
Q Consensus 58 w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t 137 (348)
-..|.....+...+.+.|+.+.|.+...++.++.=+++.+++..++|||++++++.|..+.+.|+.++...+ +.+.+
T Consensus 50 ~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~---~~~~~ 126 (260)
T TIGR00950 50 LLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG---NLSIN 126 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC---ccccc
Confidence 356666677888888999999999999999999999999999999999999999999999999988764321 11110
Q ss_pred hHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHH--HHHHHHhhhHHHHHHHHHHHHHH
Q 018943 138 PEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFS--YAIVSGAVGSFSVLFAKSLSNLL 215 (348)
Q Consensus 138 ~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~--y~~~sGllgg~tvl~~K~~~~~l 215 (348)
.... .+.....+.........|+... +.++. .... +....| +... ..-
T Consensus 127 ---------~~G~-~~~l~a~~~~a~~~~~~k~~~~------~~~~~----~~~~~~~~~~~~---~~~l-~~~------ 176 (260)
T TIGR00950 127 ---------PAGL-LLGLGSGISFALGTVLYKRLVK------KEGPE----LLQFTGWVLLLG---ALLL-LPF------ 176 (260)
T ss_pred ---------HHHH-HHHHHHHHHHHHHHHHHhHHhh------cCCch----HHHHHHHHHHHH---HHHH-HHH------
Confidence 0111 1111111111111112232210 00000 0011 111211 1111 100
Q ss_pred HHHhcCCccchhHHHHH-HH-HHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHH
Q 018943 216 RLAMSNGYQLHSWFTYS-ML-LLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATM 293 (348)
Q Consensus 216 ~~~~~g~~~~~~~~~y~-ll-~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~ 293 (348)
....+.....++..+. ++ ...+.+.+.+ .+.++++++.+++.+..+.+ ..|+.+.+.+.++++|.. ++.+
T Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E~~--~~~~--- 248 (260)
T TIGR00950 177 -AWFLGPNPQALSLQWGALLYLGLIGTALAY-FLWNKGLTLVDPSAASILAL-AEPLVALLLGLLILGETL--SLPQ--- 248 (260)
T ss_pred -HHhcCCCCCcchHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCchHHHHHHH-HHHHHHHHHHHHHhCCCC--CHHH---
Confidence 0012221111333342 22 2222333443 34489999999888777765 788999999999999953 4443
Q ss_pred HHHHHHHHHHhh
Q 018943 294 FILGTASVFIGI 305 (348)
Q Consensus 294 ~~~G~~vi~~GV 305 (348)
..|..+++.|+
T Consensus 249 -~~G~~li~~g~ 259 (260)
T TIGR00950 249 -LIGGALIIAAV 259 (260)
T ss_pred -HHHHHHHHHhc
Confidence 35556666664
No 11
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.48 E-value=8.8e-06 Score=80.48 Aligned_cols=224 Identities=11% Similarity=0.154 Sum_probs=117.7
Q ss_pred HHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHH------hccccchhhhhHHHHhhhcceeEEeecCCC------CCC
Q 018943 68 GNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFV------FNKMVTVKVLVATAFIVLGNIFLVSFGNHQ------SPV 135 (348)
Q Consensus 68 g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~------l~e~~~~~~~~g~~li~~G~~~iv~~~~~~------~~~ 135 (348)
...+...++.+.|.+...=+....=++.+++++++ +|||++++++.|.++.++|+.++...+... +..
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~ 170 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY 170 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence 33456789999999999999999999999999999 699999999999999999988654321110 000
Q ss_pred CChHHHH--HHhcchhHHHHHHHH-HHHHHHH--HHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHHH
Q 018943 136 YTPEQLA--EKYSNITFLVYCLIL-IFIVAIY--HYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKS 210 (348)
Q Consensus 136 ~t~~el~--~~~~~~~fl~y~~~~-~~i~~~~--~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K~ 210 (348)
.+..+.. .......+.....+. ...++.. ....|+.. +++. ....+....+++++.-....
T Consensus 171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~----------~~~~--~~~~~t~~~~~~~~~~~~~~-- 236 (358)
T PLN00411 171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIM----------SEYP--AAFTVSFLYTVCVSIVTSMI-- 236 (358)
T ss_pred ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHcC--cHhHHHHHHHHHHHHHHHHH--
Confidence 0000000 000011111111111 1111111 11233211 0010 01122222222222211110
Q ss_pred HHHHHHHHhcCC--cc-ch--hHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhcccccc
Q 018943 211 LSNLLRLAMSNG--YQ-LH--SWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV 285 (348)
Q Consensus 211 ~~~~l~~~~~g~--~~-~~--~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~ 285 (348)
+ .. .++. .. .. ++....++...+.+.+. ..+.|+++++-+++.+ .++.-..|+++++.|.++++|..+
T Consensus 237 -~-l~---~~~~~~~~~~~~~~~~~~~i~y~~i~t~la-y~lw~~~v~~~ga~~a-s~~~~L~PV~a~llg~l~LgE~lt 309 (358)
T PLN00411 237 -G-LV---VEKNNPSVWIIHFDITLITIVTMAIITSVY-YVIHSWTVRHKGPLYL-AIFKPLSILIAVVMGAIFLNDSLY 309 (358)
T ss_pred -H-HH---HccCCcccceeccchHHHHHHHHHHHHHHH-HHHHHHHHhccCchHH-HHHHhHHHHHHHHHHHHHhCCCCc
Confidence 0 11 1111 11 11 11112222112223322 2246999999988874 455668899999999999999643
Q ss_pred CChHHHHHHHHHHHHHHHhhhhccCCCCCCccc
Q 018943 286 FDALRATMFILGTASVFIGISLLAPDESKGILM 318 (348)
Q Consensus 286 ~~~~~~~~~~~G~~vi~~GV~lLs~~~~~~~~~ 318 (348)
+. -.+|.++++.|+++.++.+.+|..+
T Consensus 310 --~~----~~iG~~LIl~Gv~l~~~~~~~~~~~ 336 (358)
T PLN00411 310 --LG----CLIGGILITLGFYAVMWGKANEEKD 336 (358)
T ss_pred --HH----HHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 33 3478888999999887655544433
No 12
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=98.45 E-value=1.9e-07 Score=77.22 Aligned_cols=105 Identities=18% Similarity=0.230 Sum_probs=83.2
Q ss_pred HHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhhhhhHHHhhhh-hhHHHHH
Q 018943 17 AINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALG-SVQFVSN 95 (348)
Q Consensus 17 ~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~ 95 (348)
+-+..+-+.||+....++.. ++. +..+..+.+++||..++++++...|++..+..++-+|+|+..|+. +++++++
T Consensus 7 ~WG~Tnpfik~g~~~~~~~~---~~~-~~~~~~~~Ll~n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT 82 (113)
T PF10639_consen 7 LWGCTNPFIKRGSSGLEKVK---ASL-QLLQEIKFLLLNPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFT 82 (113)
T ss_pred HhcCchHHHHHHHhhcCCcc---chH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHH
Confidence 33556677888866543211 000 012344568999999999999999999999999999999999995 9999999
Q ss_pred HHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 96 IAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 96 ~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
++.++++.+|..+++.+.|+.+++.|+.++
T Consensus 83 ~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 83 ALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 999977777777888899999999998875
No 13
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.45 E-value=1.3e-06 Score=73.24 Aligned_cols=115 Identities=15% Similarity=0.161 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhhhcccc------------------CCCCCCCCCccccccccccchhHHHHHHHHHHHH
Q 018943 9 FINLVGSIAINFGTNLLKLGHIEREKHS------------------TLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNC 70 (348)
Q Consensus 9 ~lal~~a~~~a~G~~lqk~a~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~p~w~~G~~~~~~g~~ 70 (348)
..|+++|++.+++..+-|-+....+..- ...+....+.-..|.++ .-..+-+.-+++.+
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~l---flilSGla~glswl 82 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWL---FLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceeh---hhhHHHHHHHHHHH
Confidence 5788888999999998887754321100 00000000000111110 11222255568888
Q ss_pred HHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEE
Q 018943 71 LNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV 126 (348)
Q Consensus 71 ~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv 126 (348)
+-+.|+.-++.|.|+|+...+.+++.++|..+||||++..+|+|+.+|++|++++.
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 88999999999999999999999999999999999999999999999999988754
No 14
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.39 E-value=2.5e-05 Score=74.84 Aligned_cols=66 Identities=17% Similarity=0.221 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 58 w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
...|+. +.+...++..++.+.+.+..+-+.+.+-+++.+++++++|||++++++.|.++++.|+.+
T Consensus 69 ~~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l 134 (302)
T TIGR00817 69 LPVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVAL 134 (302)
T ss_pred HHHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhh
Confidence 345555 467788889999999999999999999999999999999999999999999999999875
No 15
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.32 E-value=5.4e-05 Score=72.35 Aligned_cols=212 Identities=14% Similarity=0.055 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHHHH-hhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCCCCCCC
Q 018943 59 RVGILVFLLGNCLNFISF-GYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYT 137 (348)
Q Consensus 59 ~~G~~~~~~g~~~~~~al-~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t 137 (348)
+.|......+..+...+. ...|.....-+..+.=++..+++.+ +|||++++++.|..+.+.|+.++.. ++ +.+.
T Consensus 73 ~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~--~~-~~~~- 147 (292)
T PRK11272 73 LIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS--GG-NLSG- 147 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc--Cc-cccc-
Confidence 345554455566666776 7888888888888888899999975 7999999999999999999876432 11 1111
Q ss_pred hHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 018943 138 PEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRL 217 (348)
Q Consensus 138 ~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K~~~~~l~~ 217 (348)
+ .... .+.....+..+......|+.. ++++ .....+....| +...... . ..
T Consensus 148 -~-------~~G~-l~~l~a~~~~a~~~~~~~~~~-------~~~~----~~~~~~~~~~~---~~~~~~~---~-~~-- 198 (292)
T PRK11272 148 -N-------PWGA-ILILIASASWAFGSVWSSRLP-------LPVG----MMAGAAEMLAA---GVVLLIA---S-LL-- 198 (292)
T ss_pred -c-------hHHH-HHHHHHHHHHHHHHHHHHhcC-------CCcc----hHHHHHHHHHH---HHHHHHH---H-HH--
Confidence 0 0111 111111111111111122211 1100 01122222111 1111010 0 01
Q ss_pred HhcCC--ccchhHHHHHH-HHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHH
Q 018943 218 AMSNG--YQLHSWFTYSM-LLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMF 294 (348)
Q Consensus 218 ~~~g~--~~~~~~~~y~l-l~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~ 294 (348)
.+. ....++..|.. +...+.+...-..+.|+++++.+++.+... ....|+.+.+.|.++++|.. ++. .
T Consensus 199 --~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~-~~l~Pi~a~i~~~~~l~E~~--t~~----~ 269 (292)
T PRK11272 199 --SGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSY-AYVNPVVAVLLGTGLGGETL--SPI----E 269 (292)
T ss_pred --cCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH-HHHHHHHHHHHHHHHcCCCC--cHH----H
Confidence 121 11123344432 222333333444456899999988776655 66889999999999999963 333 3
Q ss_pred HHHHHHHHHhhhhccCCCC
Q 018943 295 ILGTASVFIGISLLAPDES 313 (348)
Q Consensus 295 ~~G~~vi~~GV~lLs~~~~ 313 (348)
..|.++++.|++++++++.
T Consensus 270 iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 270 WLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4778888999999887654
No 16
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.32 E-value=5.9e-05 Score=72.24 Aligned_cols=212 Identities=17% Similarity=0.116 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHHhhh----hhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCCCCCC
Q 018943 61 GILVFLLGNCLNFISFGYA----AQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVY 136 (348)
Q Consensus 61 G~~~~~~g~~~~~~al~~~----p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~ 136 (348)
|...+.....+.+.++.++ |.+...-+..+.=++..++++.++|||++++++.|+++...|+.++...++ ..
T Consensus 67 ~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~----~~ 142 (295)
T PRK11689 67 GGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDN----GL 142 (295)
T ss_pred HhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCc----cc
Confidence 3333444444455555443 444455566677788999999999999999999999999999987653211 01
Q ss_pred ChHHHHHHhcchhHHHHHHHHHHHHH--HHHHHHHhccccccccCCCchhhhhhhhHHH-HHHHHhhhHHHHHHHHHHHH
Q 018943 137 TPEQLAEKYSNITFLVYCLILIFIVA--IYHYIYRKGENLLAVSGQDNRYWRMLLPFSY-AIVSGAVGSFSVLFAKSLSN 213 (348)
Q Consensus 137 t~~el~~~~~~~~fl~y~~~~~~i~~--~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y-~~~sGllgg~tvl~~K~~~~ 213 (348)
+.++......+. ............+ ......|+-. ++ .. ++.+ ...+ +..... ..
T Consensus 143 ~~~~~~~~~~~~-~~G~~~~l~aa~~~A~~~v~~k~~~-------~~---~~---~~~~~~~~~----~~~l~~----~~ 200 (295)
T PRK11689 143 SLAELINNIASN-PLSYGLAFIGAFIWAAYCNVTRKYA-------RG---KN---GITLFFILT----ALALWI----KY 200 (295)
T ss_pred hhhhhhhccccC-hHHHHHHHHHHHHHHHHHHHHhhcc-------CC---CC---chhHHHHHH----HHHHHH----HH
Confidence 111110000000 1111111111111 1111223321 00 01 1111 1111 111111 00
Q ss_pred HHHHHhcCCc-cchhHHHHHHHHH-HHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHH
Q 018943 214 LLRLAMSNGY-QLHSWFTYSMLLL-FFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRA 291 (348)
Q Consensus 214 ~l~~~~~g~~-~~~~~~~y~ll~~-~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~ 291 (348)
.. ++.. .-.++..+..++. .+.+.+.+ .+.|+++++.+++.+.+. .-..|+++++.|.++++|.. ++.
T Consensus 201 ~~----~~~~~~~~~~~~~~~l~~~~~~t~~~~-~l~~~al~~~~a~~~s~~-~~l~Pv~a~i~~~~~lgE~~--~~~-- 270 (295)
T PRK11689 201 FL----SPQPAMVFSLPAIIKLLLAAAAMGFGY-AAWNVGILHGNMTLLATA-SYFTPVLSAALAALLLSTPL--SFS-- 270 (295)
T ss_pred HH----hcCccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHccCHHHHHHH-HHhHHHHHHHHHHHHhCCCC--cHH--
Confidence 11 1211 1122333322222 23333333 344999999998866555 45789999999999999964 333
Q ss_pred HHHHHHHHHHHHhhhhccC
Q 018943 292 TMFILGTASVFIGISLLAP 310 (348)
Q Consensus 292 ~~~~~G~~vi~~GV~lLs~ 310 (348)
..+|.++++.|+++...
T Consensus 271 --~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 271 --FWQGVAMVTAGSLLCWL 287 (295)
T ss_pred --HHHHHHHHHHhHHHHhh
Confidence 34677778888766543
No 17
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.28 E-value=0.00039 Score=66.55 Aligned_cols=263 Identities=14% Similarity=0.098 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCC-CC--CC---CC-ccccccccccch----hHHHHHHHHHHHHHHH
Q 018943 5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLD-SD--GT---NG-KHSLKPIVHYHS----WRVGILVFLLGNCLNF 73 (348)
Q Consensus 5 ~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~-~~--~~---~~-~~~~~~~l~~p~----w~~G~~~~~~g~~~~~ 73 (348)
..|+.+.+++.++.+.+..+-|.+....+....-- +- +. -. .+..+...+++. ++.|.. +.....+.+
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~ 89 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS-LGGMNYLFY 89 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH-HHHHHHHHH
Confidence 45788889999999999999887654211100000 00 00 00 000000011222 255543 456667778
Q ss_pred HHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCCCCCCChHHHHHHhcchhHHHH
Q 018943 74 ISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTPEQLAEKYSNITFLVY 153 (348)
Q Consensus 74 ~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t~~el~~~~~~~~fl~y 153 (348)
.++...|.+...-+....=++..+++ +|+.+ ++.+..+.+.|+.++...+.. ....+ . .+.+ +
T Consensus 90 ~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~~~~~~i~~~Gv~li~~~~~~-~~~~~---~------~G~l-l 152 (293)
T PRK10532 90 LSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--DFVWVVLAVLGLWFLLPLGQD-VSHVD---L------TGAA-L 152 (293)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--HHHHHHHHHHHHheeeecCCC-cccCC---h------HHHH-H
Confidence 88889888877666655555555555 35543 456677778888775432211 11110 0 0111 1
Q ss_pred HHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCccchhHHHHHH
Q 018943 154 CLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNGYQLHSWFTYSM 233 (348)
Q Consensus 154 ~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K~~~~~l~~~~~g~~~~~~~~~y~l 233 (348)
.....+..+......|+.. .+.++ . ...+. .++++.-. .. .. .. .+.....++..+..
T Consensus 153 ~l~aa~~~a~~~v~~r~~~------~~~~~-~----~~~~~---~~~~~~~l-~~--~~-~~----~~~~~~~~~~~~~~ 210 (293)
T PRK10532 153 ALGAGACWAIYILSGQRAG------AEHGP-A----TVAIG---SLIAALIF-VP--IG-AL----QAGEALWHWSILPL 210 (293)
T ss_pred HHHHHHHHHHHHHHHHHHh------ccCCc-h----HHHHH---HHHHHHHH-HH--HH-HH----ccCcccCCHHHHHH
Confidence 1111111111111223321 01111 1 11111 12222111 10 11 01 11111223444432
Q ss_pred -HHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCC
Q 018943 234 -LLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDE 312 (348)
Q Consensus 234 -l~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~ 312 (348)
+...+.+...+....|+++++.+++.+.+. ....|+++.+.|.++++|.. ++.+ .+|.++++.|+...++.+
T Consensus 211 ~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~-~~l~Pv~a~l~~~l~lgE~~--~~~~----~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 211 GLAVAILSTALPYSLEMIALTRLPTRTFGTL-MSMEPALAAVSGMIFLGETL--TLIQ----WLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhHHHHH-HHhHHHHHHHHHHHHhCCCC--cHHH----HHHHHHHHHHHHHHHhcC
Confidence 233445556666677999999999876655 55889999999999999964 4443 356666677777766554
Q ss_pred CC
Q 018943 313 SK 314 (348)
Q Consensus 313 ~~ 314 (348)
++
T Consensus 284 ~~ 285 (293)
T PRK10532 284 RR 285 (293)
T ss_pred CC
Confidence 44
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.27 E-value=0.00022 Score=66.38 Aligned_cols=212 Identities=14% Similarity=0.162 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHH-HHhccccchhhhhHHHHhhhcceeEEeecCCCCCCCC
Q 018943 59 RVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSY-FVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYT 137 (348)
Q Consensus 59 ~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~-~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t 137 (348)
..|......+..+.+.++...|.+..+++.+..-+++.+++. +++|||++++++.|..+...|+.++...+..+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~-- 151 (292)
T COG0697 74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL-- 151 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH--
Confidence 445555667888889999999999999999999999999997 66799999999999999999988755422221110
Q ss_pred hHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHH-HHHHHHhhhHHHHHHHHHHHHHHH
Q 018943 138 PEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFS-YAIVSGAVGSFSVLFAKSLSNLLR 216 (348)
Q Consensus 138 ~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~-y~~~sGllgg~tvl~~K~~~~~l~ 216 (348)
...-..+.....+...+.....|+-. +.++. .... +... ....... .
T Consensus 152 ---------~~~g~~~~l~a~~~~a~~~~~~~~~~-------~~~~~----~~~~~~~~~----~~~~~~~--------~ 199 (292)
T COG0697 152 ---------SLLGLLLALAAALLWALYTALVKRLS-------RLGPV----TLALLLQLL----LALLLLL--------L 199 (292)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHhc-------CCChH----HHHHHHHHH----HHHHHHH--------H
Confidence 01111111111111111111222210 00000 0111 1111 0111000 0
Q ss_pred HHhcCCccchhHHHHHHHHH-HHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHH
Q 018943 217 LAMSNGYQLHSWFTYSMLLL-FFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFI 295 (348)
Q Consensus 217 ~~~~g~~~~~~~~~y~ll~~-~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~ 295 (348)
....+.+....+..+..+.. .+.....-..+.+++++..+++.+.|.. ...++.++..+..+++|.. +..+ .
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~l~~~e~~--~~~~----~ 272 (292)
T COG0697 200 FFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLS-LLEPVFAALLGVLLLGEPL--SPAQ----L 272 (292)
T ss_pred HHhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHHHHHHHhCCCC--cHHH----H
Confidence 00111111122222322222 2222222334458999999999888876 6677778889999999964 3333 3
Q ss_pred HHHHHHHHhhhhccCC
Q 018943 296 LGTASVFIGISLLAPD 311 (348)
Q Consensus 296 ~G~~vi~~GV~lLs~~ 311 (348)
.|..+++.|+.+..++
T Consensus 273 ~G~~li~~g~~l~~~~ 288 (292)
T COG0697 273 LGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 5557788888888766
No 19
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.21 E-value=0.00049 Score=66.18 Aligned_cols=228 Identities=15% Similarity=0.138 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCCCCCCC
Q 018943 58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYT 137 (348)
Q Consensus 58 w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t 137 (348)
+..+ .++.++..++-.|+.+.|...-.=+-+...+++++++.+++|+|.+++++.+++++++|+.+......++++..+
T Consensus 68 ~~~~-~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~ 146 (303)
T PF08449_consen 68 AILS-FLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSN 146 (303)
T ss_pred HHHH-HHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccc
Confidence 3444 556688889999999999999999999999999999999999999999999999999999987665443332221
Q ss_pred hHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHH-HHHHHHHHHHHH
Q 018943 138 PEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFS-VLFAKSLSNLLR 216 (348)
Q Consensus 138 ~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~t-vl~~K~~~~~l~ 216 (348)
.++ .++.. .++.+..-.++-.... -..|+..+.++. +.+ ..+.|.-.-|+..... ...-+ -.+. .
T Consensus 147 ~~~-----~~~~~-G~~ll~~sl~~~a~~~-~~qe~~~~~~~~--~~~---~~mfy~n~~~~~~~~~~~~~l~-~~~~-~ 212 (303)
T PF08449_consen 147 SSS-----FSSAL-GIILLLLSLLLDAFTG-VYQEKLFKKYGK--SPW---ELMFYTNLFSLPFLLILLFLLP-TGEF-R 212 (303)
T ss_pred ccc-----ccchh-HHHHHHHHHHHHHHHH-HHHHHHHHHhCC--cHH---HHHHHHHHHHHHHHHHHHHHHH-hhHh-h
Confidence 111 01111 1111111111100000 000111111111 112 2455554444332222 21111 1111 1
Q ss_pred HHhcCCccchhHHHHHHHHHHH-HHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHH
Q 018943 217 LAMSNGYQLHSWFTYSMLLLFF-STAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFI 295 (348)
Q Consensus 217 ~~~~g~~~~~~~~~y~ll~~~~-~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~ 295 (348)
... +....||..+..++... ...+.| .+.+.-.+++++....=+ ...=...+++.+.++|++ ++++.+++
T Consensus 213 ~~~--~f~~~~p~~~~~l~~~s~~~~~g~-~~i~~~~~~~~al~~t~v-~t~Rk~~sillS~~~f~~--~~~~~~~~--- 283 (303)
T PF08449_consen 213 SAI--RFISAHPSVLLYLLLFSLTGALGQ-FFIFYLIKKFSALTTTIV-TTLRKFLSILLSVIIFGH--PLSPLQWI--- 283 (303)
T ss_pred HHH--HHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCchhhhhH-HHHHHHHHHHHHHHhcCC--cCChHHHH---
Confidence 000 11235666665544433 344555 444566777777664444 344466788899999986 55666654
Q ss_pred HHHHHHHHhhhhccC
Q 018943 296 LGTASVFIGISLLAP 310 (348)
Q Consensus 296 ~G~~vi~~GV~lLs~ 310 (348)
|..+++.|+.+=+.
T Consensus 284 -G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 284 -GIVLVFAGIFLYSY 297 (303)
T ss_pred -HHHHhHHHHHHHHH
Confidence 44456666655443
No 20
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.18 E-value=3.5e-06 Score=69.37 Aligned_cols=66 Identities=26% Similarity=0.425 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEe
Q 018943 61 GILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS 127 (348)
Q Consensus 61 G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~ 127 (348)
|......+..+.+.|+.+.| ..+.|+.+++.+++.+++..++|||++++++.|++++.+|+.++..
T Consensus 41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAW 106 (113)
T ss_pred HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence 44445588999999999999 6899999999999999999999999999999999999999887644
No 21
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.07 E-value=4e-05 Score=64.30 Aligned_cols=96 Identities=15% Similarity=0.153 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHhhhhhHHHhhhh-hh
Q 018943 12 LVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALG-SV 90 (348)
Q Consensus 12 l~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~-~~ 90 (348)
+.+.++=..|....|++...+ + + ..|+..+.+++++..+...++...|+++.+|+- ++
T Consensus 8 ~~Ai~~Ev~~t~~LK~s~g~~------------~---~------~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~Gi 66 (120)
T PRK10452 8 ALAIATEITGTLSMKWASVSE------------G---N------GGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGI 66 (120)
T ss_pred HHHHHHHHHHHHHHHhhccCC------------C---c------HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHH
Confidence 345566677778888763210 0 1 136777888899999999999999999999994 69
Q ss_pred HHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEee
Q 018943 91 QFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSF 128 (348)
Q Consensus 91 ~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~ 128 (348)
+.+...+.+.+++||+++..++.|..+++.|++++=..
T Consensus 67 G~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 67 GILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999876443
No 22
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.04 E-value=0.00091 Score=65.89 Aligned_cols=68 Identities=16% Similarity=0.165 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEE
Q 018943 58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV 126 (348)
Q Consensus 58 w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv 126 (348)
...|+.-. .+......++++.+.+..+=+-+.+=+++++++++++|||++++++.|.+++++|+.+..
T Consensus 118 lp~gl~~~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 118 LPQGLCHL-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHH-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 34444333 234555689999999999999999999999999999999999999999999999998854
No 23
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.97 E-value=0.00047 Score=65.47 Aligned_cols=217 Identities=17% Similarity=0.179 Sum_probs=117.8
Q ss_pred hhHHHHHH---HHHHHHHHHHHHhhhhhHHHhhhh-hhHHHHHHHHHHHHhccccchhhhh----HHHHhhhcceeEEee
Q 018943 57 SWRVGILV---FLLGNCLNFISFGYAAQSLLAALG-SVQFVSNIAFSYFVFNKMVTVKVLV----ATAFIVLGNIFLVSF 128 (348)
Q Consensus 57 ~w~~G~~~---~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~~~~s~~~l~e~~~~~~~~----g~~li~~G~~~iv~~ 128 (348)
.|+.+++. -.+|++.|+.++.....|.--|+. +.+++.|.+.+.++++|.-+..++. +.+++++|+.+....
T Consensus 44 ~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~ 123 (269)
T PF06800_consen 44 SFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQ 123 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccc
Confidence 46666653 468999999999999999999999 5899999999999999998877763 778889998876554
Q ss_pred cCCCCCCCChHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHH
Q 018943 129 GNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFA 208 (348)
Q Consensus 129 ~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~ 208 (348)
.+++++..+..+. +...+ ...+. .+.++.|+.-.+. .+. ..+....|-..|... ++.-....
T Consensus 124 ~~~~~~~~~~~~~-----~kgi~-~Ll~s----tigy~~Y~~~~~~----~~~-~~~~~~lPqaiGm~i---~a~i~~~~ 185 (269)
T PF06800_consen 124 DKKSDKSSSKSNM-----KKGIL-ALLIS----TIGYWIYSVIPKA----FHV-SGWSAFLPQAIGMLI---GAFIFNLF 185 (269)
T ss_pred cccccccccccch-----hhHHH-HHHHH----HHHHHHHHHHHHh----cCC-ChhHhHHHHHHHHHH---HHHHHhhc
Confidence 3333322222222 11111 11111 2223333321110 011 112212222222211 11111110
Q ss_pred HHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCCh
Q 018943 209 KSLSNLLRLAMSNGYQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDA 288 (348)
Q Consensus 209 K~~~~~l~~~~~g~~~~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~ 288 (348)
+ .+.+.+..+|.=++..+.-.+.=+.|+ -+-+.--....+|+-|.. .+.+.++|+.+++|.. +.
T Consensus 186 ~------------~~~~~~k~~~~nil~G~~w~ignl~~~-is~~~~G~a~af~lSQ~~-vvIStlgGI~il~E~K--t~ 249 (269)
T PF06800_consen 186 S------------KKPFFEKKSWKNILTGLIWGIGNLFYL-ISAQKNGVATAFTLSQLG-VVISTLGGIFILKEKK--TK 249 (269)
T ss_pred c------------cccccccchHHhhHHHHHHHHHHHHHH-HhHHhccchhhhhHHhHH-HHHHHhhhheEEEecC--ch
Confidence 0 111111222221111111111111111 011122234556677766 6678899999999986 45
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 018943 289 LRATMFILGTASVFIGISL 307 (348)
Q Consensus 289 ~~~~~~~~G~~vi~~GV~l 307 (348)
.+.....+|+++++.|.++
T Consensus 250 ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 250 KEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hhHHHHHHHHHHHHHhhhc
Confidence 7888899999999988775
No 24
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.96 E-value=7.5e-05 Score=61.71 Aligned_cols=95 Identities=16% Similarity=0.123 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccch-hHHHHHHHHHHHHHHHHHHhhhhhHHHhhh-h
Q 018943 11 NLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHS-WRVGILVFLLGNCLNFISFGYAAQSLLAAL-G 88 (348)
Q Consensus 11 al~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~-w~~G~~~~~~g~~~~~~al~~~p~slv~Pl-~ 88 (348)
-+++.++=..|....|++.. . +++. ++..+.+++++..+...|+...|.++.+|. .
T Consensus 7 L~~a~~~Ev~~~~~lK~s~g---------------f-------~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~ 64 (110)
T PRK09541 7 LGGAILAEVIGTTLMKFSEG---------------F-------TRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWS 64 (110)
T ss_pred HHHHHHHHHHHHHHHHHhcC---------------C-------CchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHH
Confidence 34456666777788887721 1 1122 356667788888888999999999999999 5
Q ss_pred hhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEe
Q 018943 89 SVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS 127 (348)
Q Consensus 89 ~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~ 127 (348)
+++.+.+.+.+.+++||+++..++.|..+++.|+.++-.
T Consensus 65 GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 65 GVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 699999999999999999999999999999999988643
No 25
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.75 E-value=0.00021 Score=57.14 Aligned_cols=85 Identities=15% Similarity=0.111 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccchhH-HHHHHHHHHHHHHHHHHhhhhhHHHhhhh-h
Q 018943 12 LVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWR-VGILVFLLGNCLNFISFGYAAQSLLAALG-S 89 (348)
Q Consensus 12 l~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~w~-~G~~~~~~g~~~~~~al~~~p~slv~Pl~-~ 89 (348)
+++.++-..|+...|+++... ++.|. ..+.++.++..+...|+...|.++..|.- +
T Consensus 7 ~~a~~~ev~~~~~lK~s~g~~----------------------~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g 64 (93)
T PF00893_consen 7 LLAILFEVVGTIALKASHGFT----------------------QLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTG 64 (93)
T ss_dssp HHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHHHH-------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhc----------------------chhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence 455667777888888753211 12233 44457888999999999999999999975 5
Q ss_pred hHHHHHHHHHHHHhccccchhhhhHHHHh
Q 018943 90 VQFVSNIAFSYFVFNKMVTVKVLVATAFI 118 (348)
Q Consensus 90 ~~lv~~~~~s~~~l~e~~~~~~~~g~~li 118 (348)
++.+...+.+.+++||+++..++.|..+|
T Consensus 65 ~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 65 LGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 99999999999999999999999999875
No 26
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.68 E-value=0.00091 Score=62.78 Aligned_cols=68 Identities=19% Similarity=0.384 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEe
Q 018943 60 VGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS 127 (348)
Q Consensus 60 ~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~ 127 (348)
+=-++|.+.+.+.++++...|.+.-|=+...-++++.+++.++||+|+++++|++..+.++|+.++-.
T Consensus 22 vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~ 89 (244)
T PF04142_consen 22 VPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQL 89 (244)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeec
Confidence 34478999999999999999999999999999999999999999999999999999999999887654
No 27
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.66 E-value=0.0081 Score=56.00 Aligned_cols=62 Identities=10% Similarity=0.026 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEE
Q 018943 65 FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV 126 (348)
Q Consensus 65 ~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv 126 (348)
+..+..+.+.++...|.+...-+...+=+++++++++++|||++++++.|.++...|+.++.
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 55778888999999999988888888889999999999999999999999999999988643
No 28
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.66 E-value=0.00021 Score=68.40 Aligned_cols=126 Identities=13% Similarity=0.061 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCC---CC------CCccccccccccc----hhHHHHHHHHHHHHH
Q 018943 5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSD---GT------NGKHSLKPIVHYH----SWRVGILVFLLGNCL 71 (348)
Q Consensus 5 ~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~---~~------~~~~~~~~~l~~p----~w~~G~~~~~~g~~~ 71 (348)
.+|.++++.++++.+.+.++.||...+.+.... .-. +. .-........... .++.|+...+++..+
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l 225 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYSL 225 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999998886433211000 000 00 0000000000001 246667777888999
Q ss_pred HHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCC
Q 018943 72 NFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNH 131 (348)
Q Consensus 72 ~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~ 131 (348)
+..++...|.+.++++..+.-+++.+++.+++||+++..+++|.++++.|+.......++
T Consensus 226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999998875443333
No 29
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.65 E-value=0.00022 Score=60.07 Aligned_cols=114 Identities=18% Similarity=0.255 Sum_probs=75.5
Q ss_pred hHHHHHHHHhhhHHHHHHHHHHHHH--------HHH-----------HhcCCccch---hHHHHHHHHH-HHHHHHHHHH
Q 018943 190 PFSYAIVSGAVGSFSVLFAKSLSNL--------LRL-----------AMSNGYQLH---SWFTYSMLLL-FFSTAGFWMA 246 (348)
Q Consensus 190 ~l~y~~~sGllgg~tvl~~K~~~~~--------l~~-----------~~~g~~~~~---~~~~y~ll~~-~~~~~l~Q~~ 246 (348)
...|+..++.++|.+.+++|..-|- +++ ...|..|-. ++..|..++. .+.+.+.++.
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~ 83 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLL 83 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHH
Confidence 4677777888888888888866551 111 113432322 3333333333 3445555544
Q ss_pred HHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCC
Q 018943 247 RLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPD 311 (348)
Q Consensus 247 ~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~ 311 (348)
|. +|++.++++.|+|+= -.....++..+..+++|....+. .+|+.++.+|+++++++
T Consensus 84 Yf-~ALk~G~as~VvPld-k~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs~~ 140 (140)
T COG2510 84 YF-RALKKGKASRVVPLD-KTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVSLR 140 (140)
T ss_pred HH-HHHhcCCcceEEEcc-cccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEecC
Confidence 43 899999999999984 45677788999999999765432 37889999999999864
No 30
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.63 E-value=0.0025 Score=62.69 Aligned_cols=299 Identities=9% Similarity=0.013 Sum_probs=150.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhhhhh-cc----cc----CCCC-C-CCCCcccccccc---ccchhHHHH---HHH
Q 018943 3 EWVIGAFINLVGSIAINFGTNLLKLGHIER-EK----HS----TLDS-D-GTNGKHSLKPIV---HYHSWRVGI---LVF 65 (348)
Q Consensus 3 ~~~iGv~lal~~a~~~a~G~~lqk~a~~~~-~~----~~----~~~~-~-~~~~~~~~~~~l---~~p~w~~G~---~~~ 65 (348)
+..+|++..+++.++.+.=.+-|||...-+ |. .. .-.. . +.-+.+...+.+ ....|..++ .+-
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~~k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~W 83 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKKVKKWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGALW 83 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHHH
Confidence 456799999999999988888888742111 00 00 0000 0 000000001111 122344444 345
Q ss_pred HHHHHHHHHHHhhhhhHHHhhhhh-hHHHHHHHHHHHHhcccc---chh----hhhHHHHhhhcceeEEeecCCCCCCCC
Q 018943 66 LLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMV---TVK----VLVATAFIVLGNIFLVSFGNHQSPVYT 137 (348)
Q Consensus 66 ~~g~~~~~~al~~~p~slv~Pl~~-~~lv~~~~~s~~~l~e~~---~~~----~~~g~~li~~G~~~iv~~~~~~~~~~t 137 (348)
.+|++.++.+..+.-.|+-.|+.. ++++.+.++...+++|-- +.. ...|++++++|+.+....+...|++.+
T Consensus 84 ~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~ 163 (345)
T PRK13499 84 GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMG 163 (345)
T ss_pred HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 689999999999999999999987 789999999999998644 322 357999999998886654433333222
Q ss_pred hHHHHHHhcchhHHHHHHHHHH-HHHHHHHHHHhccc---cccccCCCchhhhhhhhHHHHHHHHh-hhHHHHHHHHHHH
Q 018943 138 PEQLAEKYSNITFLVYCLILIF-IVAIYHYIYRKGEN---LLAVSGQDNRYWRMLLPFSYAIVSGA-VGSFSVLFAKSLS 212 (348)
Q Consensus 138 ~~el~~~~~~~~fl~y~~~~~~-i~~~~~~~~r~~~~---~~~~~g~~~~~~~~~~~l~y~~~sGl-lgg~tvl~~K~~~ 212 (348)
.||-.+.-.+...+ .+.+..+ ..+..... ..++. ..+..|. ++.+ .......++ +|++..-+.=+..
T Consensus 164 ~~~~~~~~~~KGi~-ialisgi~~~~f~~~~-~~~~~~~~~a~~~g~-~~~~-----~~lp~~~~~~~G~~~~n~~~~~~ 235 (345)
T PRK13499 164 IKKAEEFNLKKGLI-LAVMSGIFSACFSFAM-DAGKPMHEAAAALGV-DPLY-----AALPSYVVIMGGGAITNLGFCFI 235 (345)
T ss_pred cccccccchHhHHH-HHHHHHHHHHHHHHHH-hhccchhhhhhhcCC-CchH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 11000100111222 2222222 22222111 11111 0011122 1111 111122221 2333221111111
Q ss_pred HHHH-HHhcCCccchh-----HHHHHHHHHHHHHHHHHHHHHhhhhc-cc--cccchhhhHHHHHHHHHHHhhhhhcccc
Q 018943 213 NLLR-LAMSNGYQLHS-----WFTYSMLLLFFSTAGFWMARLNEGLS-LF--DAILIVPMFQIAWTSFSICTGFVYFQEY 283 (348)
Q Consensus 213 ~~l~-~~~~g~~~~~~-----~~~y~ll~~~~~~~l~Q~~~Ln~aL~-~~--d~~~vvP~~~v~~~~~si~~G~i~f~E~ 283 (348)
.+-+ +..+....+.. +..+++....-+.=-.|..+.=.+-+ .. .+....++-+....+++.+.|. +++|+
T Consensus 236 ~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~ 314 (345)
T PRK13499 236 RLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEW 314 (345)
T ss_pred HHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhc
Confidence 1111 11110111221 33344333332333445333211111 11 1222445555556677788888 59999
Q ss_pred ccCChHHHHHHHHHHHHHHHhhhhccC
Q 018943 284 QVFDALRATMFILGTASVFIGISLLAP 310 (348)
Q Consensus 284 ~~~~~~~~~~~~~G~~vi~~GV~lLs~ 310 (348)
.+.+..+.....+|+++++.|.+++.-
T Consensus 315 K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 315 KGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred cCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 999899999999999999999998764
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.45 E-value=0.00052 Score=55.71 Aligned_cols=68 Identities=16% Similarity=0.335 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 58 w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
...|.+...++..+...++...|.+.++++..++-+++.+++..++||+++++++.|+.+++.|+.++
T Consensus 57 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 57 LFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 45555556789999999999999999999999999999999999999999999999999999998753
No 32
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.41 E-value=0.0011 Score=61.62 Aligned_cols=118 Identities=14% Similarity=0.085 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCC---C---------CCCCccccccccccchh----HHHHHHHHH
Q 018943 4 WVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDS---D---------GTNGKHSLKPIVHYHSW----RVGILVFLL 67 (348)
Q Consensus 4 ~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~---~---------~~~~~~~~~~~l~~p~w----~~G~~~~~~ 67 (348)
...|..++++++++.+....++|+...+.+.....-. . -....+.... ...+.| +.|....++
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ-ALSLQWGALLYLGLIGTAL 204 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cchHHHHHHHHHHHHHHHH
Confidence 3569999999999999999999997543210000000 0 0000000000 011223 244445568
Q ss_pred HHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcc
Q 018943 68 GNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGN 122 (348)
Q Consensus 68 g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~ 122 (348)
+..+++.++...|.+.+..+..+.-+++.+++.+++||+++..++.|+.+++.|+
T Consensus 205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 8889999999999999999999999999999999999999999999999999885
No 33
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.37 E-value=0.00081 Score=66.60 Aligned_cols=117 Identities=12% Similarity=0.148 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccc-------------------CCCCCCCCCccccccccc-cchhHHHHH
Q 018943 4 WVIGAFINLVGSIAINFGTNLLKLGHIEREKHS-------------------TLDSDGTNGKHSLKPIVH-YHSWRVGIL 63 (348)
Q Consensus 4 ~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~-~p~w~~G~~ 63 (348)
+.+|.++++.|+++.+++.++||+-..+..... ..++. . ...+.. -..+...++
T Consensus 187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~---~---~~~~~~~~~~~~~~i~ 260 (358)
T PLN00411 187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKN---N---PSVWIIHFDITLITIV 260 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccC---C---cccceeccchHHHHHH
Confidence 577999999999999999999998654321100 00000 0 000000 011111221
Q ss_pred H----HHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEE
Q 018943 64 V----FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV 126 (348)
Q Consensus 64 ~----~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv 126 (348)
. ..+++.+|..+....+.+.+..+.-+.=+++++++..+++|+++..+++|.++++.|+.+..
T Consensus 261 y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 261 TMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM 327 (358)
T ss_pred HHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 1 23477778889999999999999999999999999999999999999999999999988754
No 34
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.36 E-value=0.0024 Score=52.64 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccchhHHHH-HHHHHHHHHHHHHHhhhhhHHHh
Q 018943 7 GAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGI-LVFLLGNCLNFISFGYAAQSLLA 85 (348)
Q Consensus 7 Gv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~w~~G~-~~~~~g~~~~~~al~~~p~slv~ 85 (348)
....-+++.++=..|....|++. + +++|.|...+ ..+.+++.+-..|+...|.++..
T Consensus 8 ~~~~L~~Ai~~Ev~~t~~Lk~s~---------------g-------f~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAY 65 (109)
T PRK10650 8 HAAWLALAIVLEIVANIFLKFSD---------------G-------FRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAY 65 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---------------C-------CcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHH
Confidence 33444566666677888888662 1 1123343333 34566777777889999999999
Q ss_pred hhhh-hHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 86 ALGS-VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 86 Pl~~-~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
+.=+ ++.+...+.+.+++||+++..++.|..+++.|+..+
T Consensus 66 AvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 66 ALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 9866 889999999999999999999999999999998763
No 35
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.19 E-value=0.0033 Score=51.54 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhhhhh-hHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 59 RVGILVFLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 59 ~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~-~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
..-+.++..++.+-..|+...|.++..+.=+ ++.+.+.+.+.+++||+++..++.|..+++.|++.+
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 3445566778888888999999999998866 899999999999999999999999999999998865
No 36
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.07 E-value=0.0026 Score=60.93 Aligned_cols=113 Identities=10% Similarity=0.059 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhcccc--------------CCCCCCCCCccccccccccchh----HHHHHHHH
Q 018943 5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHS--------------TLDSDGTNGKHSLKPIVHYHSW----RVGILVFL 66 (348)
Q Consensus 5 ~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~p~w----~~G~~~~~ 66 (348)
..|..+++.|+++.|.+.++.||-..+..... ..++ .. ..+ .....| +.| ...+
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~--~~~-~~~~~~~~l~~~~-~~t~ 226 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFILTALALWIKYFLSP----QP--AMV-FSLPAIIKLLLAA-AAMG 226 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhc----Cc--ccc-CCHHHHHHHHHHH-HHHH
Confidence 45899999999999999999998643221100 0000 00 000 000112 222 2345
Q ss_pred HHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 67 LGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 67 ~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
+++.++..++...|.+.+.++..+.-+++.+++..++||+++..+++|.++|+.|+.+.
T Consensus 227 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 227 FGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 68888999999999999999999999999999999999999999999999999998764
No 37
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.07 E-value=0.0029 Score=60.45 Aligned_cols=114 Identities=11% Similarity=0.096 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhcccc-----------------CCCCCCCCCccccccccccchh----HHHHH
Q 018943 5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHS-----------------TLDSDGTNGKHSLKPIVHYHSW----RVGIL 63 (348)
Q Consensus 5 ~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~p~w----~~G~~ 63 (348)
..|..+++.++++.|.+.+..||...+.+... ..++ .. ...+ ....| +.|+.
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~--~~~~~~~i~~l~i~ 221 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGE----RL-TALP--TLSGFLALGYLAVF 221 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHcCC----cc-cccC--CHHHHHHHHHHHHH
Confidence 46999999999999999999998643211000 0000 00 0000 00123 23444
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 64 VFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 64 ~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
..+++..++..++...|.+.+..+..+.-+++++++.+++||+++..++.|+.+++.|+.+.
T Consensus 222 ~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 222 GSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283 (292)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 55677888899999999999999999999999999999999999999999999999998764
No 38
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.03 E-value=0.0018 Score=61.17 Aligned_cols=217 Identities=17% Similarity=0.128 Sum_probs=118.9
Q ss_pred HHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEE----eecCCCCCCCChHHHH
Q 018943 67 LGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV----SFGNHQSPVYTPEQLA 142 (348)
Q Consensus 67 ~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv----~~~~~~~~~~t~~el~ 142 (348)
.|..+...||.+.|++=..-..-.+=+++.++|+.+||||.|..|.+|......|+++++ +||..++++.+.+
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~--- 185 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ--- 185 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc---
Confidence 455666888888888866666666778999999999999999999999999999999886 4666554433222
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCC
Q 018943 143 EKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLLRLAMSNG 222 (348)
Q Consensus 143 ~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K~~~~~l~~~~~g~ 222 (348)
.-+..|....-..-+....++ +.+.|+- |++ .|. ...+.|=+.-+++-+. +....-|.
T Consensus 186 ~~~~~~gt~aai~s~lf~asv-yIilR~i-------Gk~-~h~--~msvsyf~~i~lV~s~-----------I~~~~ig~ 243 (346)
T KOG4510|consen 186 VEYDIPGTVAAISSVLFGASV-YIILRYI-------GKN-AHA--IMSVSYFSLITLVVSL-----------IGCASIGA 243 (346)
T ss_pred ccccCCchHHHHHhHhhhhhH-HHHHHHh-------hcc-ccE--EEEehHHHHHHHHHHH-----------HHHhhccc
Confidence 112344432222111212222 2223432 211 111 0112221111111111 10011122
Q ss_pred ccchh-HHHH-HHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHH
Q 018943 223 YQLHS-WFTY-SMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTAS 300 (348)
Q Consensus 223 ~~~~~-~~~y-~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~v 300 (348)
-|+.| +.=+ +++...+.+.+.| .+|.+|+|.=.+-- +.++.....+++.+.-+++|+|+. +.|.+ +|.+.
T Consensus 244 ~~lP~cgkdr~l~~~lGvfgfigQ-IllTm~lQiErAGp-vaim~~~dvvfAf~wqv~ff~~~P--t~ws~----~Ga~~ 315 (346)
T KOG4510|consen 244 VQLPHCGKDRWLFVNLGVFGFIGQ-ILLTMGLQIERAGP-VAIMTYTDVVFAFFWQVLFFGHWP--TIWSW----VGAVM 315 (346)
T ss_pred eecCccccceEEEEEehhhhhHHH-HHHHHHhhhhccCC-eehhhHHHHHHHHHHHHHHhcCCC--hHHHh----hceee
Confidence 23222 2222 2333345555666 56788888744443 345677788889999999999984 23444 34343
Q ss_pred HHHhhhhccCCCCCCc
Q 018943 301 VFIGISLLAPDESKGI 316 (348)
Q Consensus 301 i~~GV~lLs~~~~~~~ 316 (348)
++..++.-+++|-.+.
T Consensus 316 vvsS~v~~a~~kwa~~ 331 (346)
T KOG4510|consen 316 VVSSTVWVALKKWAGT 331 (346)
T ss_pred eehhHHHHHHHHHhcc
Confidence 4444444444444443
No 39
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.96 E-value=0.0079 Score=49.27 Aligned_cols=68 Identities=18% Similarity=0.191 Sum_probs=58.2
Q ss_pred hHH-HHHHHHHHHHHHHHHHhhhhhHHHhhhh-hhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 58 WRV-GILVFLLGNCLNFISFGYAAQSLLAALG-SVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 58 w~~-G~~~~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
|.+ -++.+.+++.+-..|+...|+++.+++= +++.+...+.+..++||+++..+++|..++++|+..+
T Consensus 32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 444 4455677888888899999999998875 4899999999999999999999999999999998764
No 40
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=96.95 E-value=0.014 Score=48.19 Aligned_cols=80 Identities=16% Similarity=0.066 Sum_probs=57.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHh
Q 018943 225 LHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIG 304 (348)
Q Consensus 225 ~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~G 304 (348)
+++|...........+...-..++..+++.-|.+..+|+.+ .-++.+.+.|..+|+|.. +.. -.+|..+++.|
T Consensus 31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E~l--s~~----~~~Gi~lii~G 103 (111)
T PRK15051 31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHEPV--SPR----HWCGVAFIIGG 103 (111)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCCCC--CHH----HHHHHHHHHHH
Confidence 34554333333333333344566789999999999999999 777788999999999965 444 34677888899
Q ss_pred hhhccCC
Q 018943 305 ISLLAPD 311 (348)
Q Consensus 305 V~lLs~~ 311 (348)
+++++++
T Consensus 104 v~~i~~~ 110 (111)
T PRK15051 104 IVILGST 110 (111)
T ss_pred HHHHhcc
Confidence 9988864
No 41
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=96.78 E-value=0.0078 Score=57.69 Aligned_cols=121 Identities=12% Similarity=0.125 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCC-C---------------CCCcccc-ccc-cccch-h----HHH
Q 018943 5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSD-G---------------TNGKHSL-KPI-VHYHS-W----RVG 61 (348)
Q Consensus 5 ~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~-~---------------~~~~~~~-~~~-l~~p~-w----~~G 61 (348)
..|+.+++.++++.+.+..++||...+.+......-. . .++.... .++ -.++. | +.|
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 3699999999999999999999853221100000000 0 0000000 000 00112 2 234
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 62 ILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 62 ~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
+...++++.+++.++...+..-+.++..+.=+++.+++.+++||+++..+++|.++++.|+.+.
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN 285 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 4455677778888888888889999999999999999999999999999999999999998753
No 42
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=96.72 E-value=0.0015 Score=62.09 Aligned_cols=119 Identities=12% Similarity=0.035 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCC-C----CC--Cccc------cccc-ccc-chh---HHHHHHHHH
Q 018943 6 IGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSD-G----TN--GKHS------LKPI-VHY-HSW---RVGILVFLL 67 (348)
Q Consensus 6 iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~-~----~~--~~~~------~~~~-l~~-p~w---~~G~~~~~~ 67 (348)
-|..++++++++.+.+..+.|+.+.+.......... . .. .... ..+. ... +.| +.+.....+
T Consensus 144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l 223 (281)
T TIGR03340 144 KAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGG 223 (281)
T ss_pred hHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHH
Confidence 366788899999999999888764322110000000 0 00 0000 0000 001 111 333444567
Q ss_pred HHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 68 GNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 68 g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
++.+++.++...|.+.+.++.-++-+++.+++.+++||+++..++.|.++++.|+.+
T Consensus 224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 888899999999999999999999999999999999999999999999999999764
No 43
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.63 E-value=0.046 Score=53.54 Aligned_cols=70 Identities=13% Similarity=0.263 Sum_probs=63.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEE
Q 018943 57 SWRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV 126 (348)
Q Consensus 57 ~w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv 126 (348)
.|-+=-++|.+-+-++.++++..|.+.-++...+-++.+.+++..+|++|+++++|...++..+|+.++-
T Consensus 94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 3455557898888899999999999999999999999999999999999999999999999999988754
No 44
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=96.57 E-value=0.049 Score=46.20 Aligned_cols=69 Identities=16% Similarity=0.236 Sum_probs=50.5
Q ss_pred HHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhh-hhccccccCChHHHHHHHHHHHHHHHhhhhccCCCCC
Q 018943 240 TAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGF-VYFQEYQVFDALRATMFILGTASVFIGISLLAPDESK 314 (348)
Q Consensus 240 ~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~-i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~~ 314 (348)
+...-..+.+.++++.|.+..+|+....+....+..-. ++|+|..+ .. -.+|.++++.||+++++++++
T Consensus 57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls--~~----~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFS--LK----KTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--HH----HHHHHHHHHHHHHHhccCCCC
Confidence 33444555699999999999999998887544444433 58999653 33 457889999999999976654
No 45
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.25 E-value=0.06 Score=45.19 Aligned_cols=67 Identities=15% Similarity=0.135 Sum_probs=54.0
Q ss_pred HHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCCCCC
Q 018943 243 FWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDESKG 315 (348)
Q Consensus 243 ~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~~~ 315 (348)
.-.+++.++++.-|.++.+|+....-++...+.|..+|+|..+ .. -.+|..+++.|++.+...+++.
T Consensus 42 ~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s--~~----~~~gi~lIi~GVi~l~l~~~~~ 108 (120)
T PRK10452 42 LSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLS--LM----KIAGLTTLVAGIVLIKSGTRKA 108 (120)
T ss_pred HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC--HH----HHHHHHHHHHHHHHhhcCCCCC
Confidence 3456789999999999999998888888899999999999653 33 3467788999999987655544
No 46
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.25 E-value=0.023 Score=46.90 Aligned_cols=81 Identities=9% Similarity=0.050 Sum_probs=60.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHH
Q 018943 224 QLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFI 303 (348)
Q Consensus 224 ~~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~ 303 (348)
.|++|.+....+.. ...-.+++.++++.-|.++.+|+-...=++...+.|.++|+|.. +.. -.+|..+++.
T Consensus 26 gf~~~~~~i~~~~~---~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~--~~~----~~~gi~lIi~ 96 (110)
T PRK09541 26 GFTRLWPSVGTIIC---YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL--DLP----AIIGMMLICA 96 (110)
T ss_pred CCCchhHHHHHHHH---HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC--CHH----HHHHHHHHHH
Confidence 36677766543332 23345667899999999999999888888999999999999965 333 3467788999
Q ss_pred hhhhccCCCC
Q 018943 304 GISLLAPDES 313 (348)
Q Consensus 304 GV~lLs~~~~ 313 (348)
||+++...++
T Consensus 97 GVi~l~l~~~ 106 (110)
T PRK09541 97 GVLVINLLSR 106 (110)
T ss_pred HHHHHhcCCC
Confidence 9999965443
No 47
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.20 E-value=0.33 Score=46.57 Aligned_cols=77 Identities=18% Similarity=0.204 Sum_probs=57.2
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhhhhH---HHhhhhhh-HHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 49 LKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQS---LLAALGSV-QFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 49 ~~~~l~~p~w~~G~~~~~~g~~~~~~al~~~p~s---lv~Pl~~~-~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
.++..|+|+-+....+..+=...|..-+-.+|-. +=+.+|=. .=++|+++++.++|||+++.+|+.+.+..+|+..
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~ 141 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLI 141 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 3456778877777777666666677777777655 33344432 2257899999999999999999999999999886
Q ss_pred E
Q 018943 125 L 125 (348)
Q Consensus 125 i 125 (348)
.
T Consensus 142 ~ 142 (293)
T COG2962 142 Q 142 (293)
T ss_pred H
Confidence 4
No 48
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=95.85 E-value=0.1 Score=43.06 Aligned_cols=76 Identities=9% Similarity=0.121 Sum_probs=58.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHH
Q 018943 224 QLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFI 303 (348)
Q Consensus 224 ~~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~ 303 (348)
.|++|.+....++.. ..=.+++.++++.-|..+.+|+-...-++...+.|.++|+|.. +..+ .+|..+++.
T Consensus 31 gf~~~~~~~~~~~~~---~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~--~~~~----~~gi~lIi~ 101 (109)
T PRK10650 31 GFRRKIYGILSLAAV---LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRL--NRKG----WIGLVLLLA 101 (109)
T ss_pred CCcchHHHHHHHHHH---HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCC--CHHH----HHHHHHHHH
Confidence 477777765444433 2335678999999999999999999999999999999999965 3333 366777888
Q ss_pred hhhhc
Q 018943 304 GISLL 308 (348)
Q Consensus 304 GV~lL 308 (348)
||+.|
T Consensus 102 GVi~l 106 (109)
T PRK10650 102 GMVMI 106 (109)
T ss_pred HHHHh
Confidence 98876
No 49
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=95.83 E-value=0.019 Score=53.21 Aligned_cols=119 Identities=16% Similarity=0.144 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCC------------CCCCCCccccccccccch--hHHHHHHHHHHHH
Q 018943 5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLD------------SDGTNGKHSLKPIVHYHS--WRVGILVFLLGNC 70 (348)
Q Consensus 5 ~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~------------~~~~~~~~~~~~~l~~p~--w~~G~~~~~~g~~ 70 (348)
..|+.+++.++++.++..++.|+-. +.......- ........ .....+.-. -..|+...+++..
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~~ 230 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAYL 230 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999654 110000000 00000000 000000001 1334444446788
Q ss_pred HHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeE
Q 018943 71 LNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFL 125 (348)
Q Consensus 71 ~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~i 125 (348)
++..++...|.+.++|+.....+++.+++..+++|+++..++.|+++++.|+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~ 285 (292)
T COG0697 231 LWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLA 285 (292)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999998764
No 50
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.75 E-value=0.11 Score=42.60 Aligned_cols=77 Identities=17% Similarity=0.059 Sum_probs=59.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHH
Q 018943 224 QLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFI 303 (348)
Q Consensus 224 ~~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~ 303 (348)
.|+++.++.+.++.. ..-.++|.++++.-|..+.+++-...=+..+.+.|..+|+|.. ++.+ .+|+.+++.
T Consensus 25 gf~~~~~~~~~i~~~---~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~--~~~~----~~gi~lIi~ 95 (105)
T PRK11431 25 GFSRLTPSIITVTAM---IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESA--SPAR----LLSLALIVA 95 (105)
T ss_pred CCccHHHHHHHHHHH---HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCC--CHHH----HHHHHHHHH
Confidence 467777776554433 3335678999999999999999888888999999999999965 3433 366788889
Q ss_pred hhhhcc
Q 018943 304 GISLLA 309 (348)
Q Consensus 304 GV~lLs 309 (348)
||+.|.
T Consensus 96 GVv~l~ 101 (105)
T PRK11431 96 GIIGLK 101 (105)
T ss_pred HHHhhh
Confidence 999884
No 51
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=95.75 E-value=0.019 Score=54.93 Aligned_cols=62 Identities=11% Similarity=-0.022 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEe
Q 018943 66 LLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS 127 (348)
Q Consensus 66 ~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~ 127 (348)
.++..+++.++...|.+.++++.-++-+++.+++.++++|+++...+.|.++++.|+.++..
T Consensus 224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 37788899999999999999999999999999999999999999999999999888776543
No 52
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=95.43 E-value=0.036 Score=53.14 Aligned_cols=115 Identities=15% Similarity=0.151 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCC--CCC-----C----ccc--cccccccchh----HHHHHHHHH
Q 018943 5 VIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSD--GTN-----G----KHS--LKPIVHYHSW----RVGILVFLL 67 (348)
Q Consensus 5 ~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~--~~~-----~----~~~--~~~~l~~p~w----~~G~~~~~~ 67 (348)
..|+..+++++++.+.-...-|+.+.+ +.+.. ... + ..+ .+++. ++.+ ..|+. ..+
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Gi~-~~i 223 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAFGVD-----GLSVLLPQAIGMVIGGIIFNLGHILAKPLK-KYAILLNILPGLM-WGI 223 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCC-----cceehhHHHHHHHHHHHHHHHHHhcccchH-HHHHHHHHHHHHH-HHH
Confidence 459999999999998888888865311 11100 000 0 000 01111 1122 24444 467
Q ss_pred HHHHHHHHHh-hhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhh----hHHHHhhhcceeEE
Q 018943 68 GNCLNFISFG-YAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVL----VATAFIVLGNIFLV 126 (348)
Q Consensus 68 g~~~~~~al~-~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~----~g~~li~~G~~~iv 126 (348)
++.+.+.+.. ..+.+...++.....+.+.+.+.+++||+.+++++ .|.++++.|+.++.
T Consensus 224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 7888888888 99999999999999999999999999999999999 99999999987653
No 53
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=94.61 E-value=0.32 Score=46.54 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEee
Q 018943 59 RVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSF 128 (348)
Q Consensus 59 ~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~ 128 (348)
..=.++.+.|..+..++|.+..+|--|-+-..-++|.-++|..+||++++.++|+|...+.+|.+.+...
T Consensus 90 l~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 90 LPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred cChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 3345788899999999999999999999999999999999999999999999999999999998876553
No 54
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.34 E-value=0.34 Score=38.52 Aligned_cols=64 Identities=9% Similarity=0.003 Sum_probs=31.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHH
Q 018943 225 LHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATM 293 (348)
Q Consensus 225 ~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~ 293 (348)
++++.+....+. +-..-..++.+|+++-|.++.+|+....=+....+.|..+|+|.. +..++++
T Consensus 26 ~~~~~~~~~~~~---~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~--s~~~~~g 89 (93)
T PF00893_consen 26 FTQLIPTILAVV---GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESL--SLSKWLG 89 (93)
T ss_dssp --------HHHH---HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHH
T ss_pred hcchhhHHHHHH---HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCC--CHHHHhh
Confidence 455554443322 333445678999999999999999999999999999999999965 4444443
No 55
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=94.31 E-value=0.29 Score=41.44 Aligned_cols=58 Identities=19% Similarity=0.308 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 67 LGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 67 ~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
+-+...+..+...+...-.=++.+--+.+.+++..+++|+++..++.|..+.+.|..+
T Consensus 93 ~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 93 LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 3444455666666666777788888899999999999999999999999999999764
No 56
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=94.31 E-value=0.53 Score=38.37 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=46.1
Q ss_pred HHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCCCCC
Q 018943 245 MARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDESKG 315 (348)
Q Consensus 245 ~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~~~ 315 (348)
....+.|+++.+ ..+.|+ ....++++.+.|.++|+|.. +.. ...|.+++.+|++++.-++..+
T Consensus 49 ~~~~~~a~~~~~-~~v~~i-~~~~pi~~~ll~~~~~~er~--~~~----~~~a~~l~~~Gv~li~~~~~~~ 111 (113)
T PF13536_consen 49 YLLFFYALSYAP-ALVAAI-FSLSPIFTALLSWLFFKERL--SPR----RWLAILLILIGVILIAWSDLTG 111 (113)
T ss_pred HHHHHHHHHhCc-HHHHHH-HHHHHHHHHHHHHHHhcCCC--CHH----HHHHHHHHHHHHHHHhhhhccc
Confidence 344468888888 455544 55699999999999999954 444 3356777889999988766544
No 57
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=94.20 E-value=0.23 Score=47.39 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=55.4
Q ss_pred hhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCCCCCcc
Q 018943 249 NEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDESKGIL 317 (348)
Q Consensus 249 n~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~~~~~ 317 (348)
-++.+.-..+...|+-...--+.+.+.|+++|+||... .+...=.+++++++.|+++-+.++++++.
T Consensus 63 f~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~--~~~~~G~~Al~liiiGv~lts~~~~~~~~ 129 (269)
T PF06800_consen 63 FKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTT--TQKIIGFLALVLIIIGVILTSYQDKKSDK 129 (269)
T ss_pred HHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCc--chHHHHHHHHHHHHHHHHHhccccccccc
Confidence 46777778899999999999999999999999999854 45555567889999999998877666664
No 58
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=93.84 E-value=0.24 Score=40.64 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=56.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHh
Q 018943 225 LHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIG 304 (348)
Q Consensus 225 ~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~G 304 (348)
|+++.++.+.+.. ...-..+|.+|++.-|..+.+++-...=+....+.|.++|+|..+ +.. .+|+.++++|
T Consensus 27 f~~~~~~il~~v~---~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~--~~~----~~gl~LiiaG 97 (106)
T COG2076 27 FTRLWPSILTIVG---YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLS--LIK----LLGLALILAG 97 (106)
T ss_pred ccccchHHHHHHH---HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCC--HHH----HHHHHHHHHH
Confidence 4555555433332 233356688999999999999999999999999999999999653 333 3677788899
Q ss_pred hhhccC
Q 018943 305 ISLLAP 310 (348)
Q Consensus 305 V~lLs~ 310 (348)
++.|-.
T Consensus 98 vi~Lk~ 103 (106)
T COG2076 98 VIGLKL 103 (106)
T ss_pred HHHhhh
Confidence 988754
No 59
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=93.79 E-value=0.4 Score=47.16 Aligned_cols=127 Identities=14% Similarity=0.140 Sum_probs=75.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCc-----c---ccccccccchhHHHHHHH-HHHHHHHH
Q 018943 3 EWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGK-----H---SLKPIVHYHSWRVGILVF-LLGNCLNF 73 (348)
Q Consensus 3 ~~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~-----~---~~~~~l~~p~w~~G~~~~-~~g~~~~~ 73 (348)
...+|-++++.|+++.|+..++|++-..+.++.+...--|.-+. . .-+.-+++-.|=.....+ +...++.+
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf 244 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLF 244 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHH
Confidence 34679999999999999999999987654332110000000000 0 000001111222222223 33344456
Q ss_pred HHHhhhhhHHH------hhhhh-hHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeec
Q 018943 74 ISFGYAAQSLL------AALGS-VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFG 129 (348)
Q Consensus 74 ~al~~~p~slv------~Pl~~-~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~ 129 (348)
.-|...|..+. .-++- .+-++++++..++.|+++++.-++|.+++++|.++.....
T Consensus 245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 77777777542 12222 3467899999999999999999999999999988765433
No 60
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=93.76 E-value=2.4 Score=40.60 Aligned_cols=78 Identities=14% Similarity=0.331 Sum_probs=59.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhh-HHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCC
Q 018943 55 YHSWRVGILVFLLGNCLNFISFGYAAQ-SLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQ 132 (348)
Q Consensus 55 ~p~w~~G~~~~~~g~~~~~~al~~~p~-slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~ 132 (348)
.+.|..-..++...+++|=.|+.|.=. -+=--+-+-+++.|+.+++.++|+|-+.+++..++.+.+|+++.-.+..++
T Consensus 64 lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d 142 (330)
T KOG1583|consen 64 LKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKD 142 (330)
T ss_pred hhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcc
Confidence 346766677777788888777777522 112224567899999999999999999999999999999998876665543
No 61
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=93.16 E-value=0.4 Score=47.56 Aligned_cols=60 Identities=13% Similarity=0.103 Sum_probs=53.1
Q ss_pred HHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCC
Q 018943 73 FISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQ 132 (348)
Q Consensus 73 ~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~ 132 (348)
=.||++-.++-..=+.+.+=+|++.++..+.+||+|..+.+++++.+.|++++.....++
T Consensus 177 naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 177 NAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 368999999989999999999999999999999999999999999999988876654444
No 62
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=91.40 E-value=0.34 Score=38.89 Aligned_cols=58 Identities=17% Similarity=0.254 Sum_probs=44.9
Q ss_pred HHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhcc
Q 018943 245 MARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLA 309 (348)
Q Consensus 245 ~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs 309 (348)
..+.++|+++.+++.+.++.+ ..+..+.+.|.++++|.. +.. ...|..+++.|+++++
T Consensus 68 ~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~~--~~~----~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 68 YLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGERP--SWR----QIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCCC--CHH----HHHHHHHHHHHHHHHH
Confidence 344589999999999998877 799999999999999964 333 3456666777777653
No 63
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=91.33 E-value=1.2 Score=43.02 Aligned_cols=119 Identities=18% Similarity=0.094 Sum_probs=72.0
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHHHHHHHH-Hh-cCCc---cchhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhh
Q 018943 188 LLPFSYAIVSGAVGSFSVLFAKSLSNLLRL-AM-SNGY---QLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVP 262 (348)
Q Consensus 188 ~~~l~y~~~sGllgg~tvl~~K~~~~~l~~-~~-~g~~---~~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP 262 (348)
..++..+.++++..+....+.|-....... .. .+.+ .+++|.-|.=++.+....+.+ + -|+...|++++-|
T Consensus 6 ~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~--~--~Al~~ap~slv~P 81 (300)
T PF05653_consen 6 YIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILN--F--VALGFAPASLVAP 81 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHH--H--HHHHhhhHHHHHH
Confidence 457888888888888888777766544332 00 0111 122233222222223333333 2 4778889999999
Q ss_pred hHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCCCCCcc
Q 018943 263 MFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDESKGIL 317 (348)
Q Consensus 263 ~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~~~~~ 317 (348)
+-- .-.+++.+.+-.+.+|..+. .+ ..|+.+++.|+.++.-..|++++
T Consensus 82 lg~-~~lv~~~~~a~~~l~e~~~~--~~----~~G~~l~i~G~~liv~~~~~~~~ 129 (300)
T PF05653_consen 82 LGA-LSLVFNAVLARFFLGEKLTR--RD----IVGCALIILGSVLIVIFAPKEEP 129 (300)
T ss_pred HHh-hhhhhHHHHhHHHhcccchH--hH----HhhHHHHHhhheeeEEeCCCCCC
Confidence 864 44556777778888986543 22 36778888898887766665554
No 64
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=91.28 E-value=1.2 Score=40.53 Aligned_cols=121 Identities=11% Similarity=0.046 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhcccc---------------C--CCCCCCCCccccccccccch-hHHHHHHH
Q 018943 4 WVIGAFINLVGSIAINFGTNLLKLGHIEREKHS---------------T--LDSDGTNGKHSLKPIVHYHS-WRVGILVF 65 (348)
Q Consensus 4 ~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~---------------~--~~~~~~~~~~~~~~~l~~p~-w~~G~~~~ 65 (348)
-..|+...+.+.++.++..+.|++..++++... . ......+.........+.|. +|.=.++.
T Consensus 83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (222)
T TIGR00803 83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLN 162 (222)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHH
Confidence 345667777777778889999988754332100 0 00000000000000111122 23333344
Q ss_pred HHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 66 LLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 66 ~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
..+.++-...+.+++-....=..++..+++.++|.++++|+++...+.|+.++..|+.+
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 56666666788888888889999999999999999999999999999999999888653
No 65
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=90.59 E-value=0.23 Score=47.44 Aligned_cols=55 Identities=15% Similarity=0.232 Sum_probs=47.7
Q ss_pred HHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 70 CLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 70 ~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
.+++.++...+.+...-.+.+.=+++.+++.++++|+++..++.|.++++.|+.+
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l 290 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFL 290 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHH
Confidence 4445677788888888888888889999999999999999999999999999876
No 66
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=90.06 E-value=2 Score=41.91 Aligned_cols=62 Identities=16% Similarity=0.249 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEE
Q 018943 65 FLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLV 126 (348)
Q Consensus 65 ~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv 126 (348)
+.+|-++.-.++..-|.+..|-.-++.-++++++++++.+|+.++..+.....++.|+.+..
T Consensus 93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias 154 (316)
T KOG1441|consen 93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIAS 154 (316)
T ss_pred HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEee
Confidence 35788888899999999999999999999999999999999999999988888888877643
No 67
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=89.76 E-value=20 Score=35.43 Aligned_cols=235 Identities=14% Similarity=0.090 Sum_probs=118.1
Q ss_pred HHHHHHHHHHhhhhhHHHhhhhh-hHHHHHHHHHHHHhc-------cccchhhhhHHHHhhhcceeEEeecCCCCCCCCh
Q 018943 67 LGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFN-------KMVTVKVLVATAFIVLGNIFLVSFGNHQSPVYTP 138 (348)
Q Consensus 67 ~g~~~~~~al~~~p~slv~Pl~~-~~lv~~~~~s~~~l~-------e~~~~~~~~g~~li~~G~~~iv~~~~~~~~~~t~ 138 (348)
+|.+..=.+..+.-.|+-+...- ++.++..++-+.+.+ .+-...-.+|++++++|+.++...|...|.+.+.
T Consensus 85 IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~ 164 (344)
T PF06379_consen 85 IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGE 164 (344)
T ss_pred cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhcc
Confidence 34433344555555565555432 344444444444433 2223455689999999988876655433333221
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhcccc---ccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 018943 139 EQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENL---LAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAKSLSNLL 215 (348)
Q Consensus 139 ~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~---~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K~~~~~l 215 (348)
|-.+.-.+...++-...-+.-.|+.+.+ ..++.. ....|. ++-+......... +.||+..-+.=++....
T Consensus 165 -~~~efn~~kGl~iAv~sGv~Sa~fn~g~-~ag~pi~~~a~a~G~-~~l~~~l~~~vvv----~~GGf~tN~~yc~~~l~ 237 (344)
T PF06379_consen 165 -EAKEFNFKKGLIIAVLSGVMSACFNFGL-DAGKPIHEAAVAAGV-NPLYANLPVYVVV----LWGGFITNLIYCLILLA 237 (344)
T ss_pred -chhhhhhhhhHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHcCC-CcHHHhCchhhhh----hhhHHHHHHHHHHHHHh
Confidence 1112111222222222222223333221 222110 011122 1222211112222 33555555555544433
Q ss_pred H-HHhc--CCccc-hhH--HHHHHHHHHHHHHHHHHHHHhhhhcc-cc--ccchhhhHHHHHHHHHHHhhhhhccccccC
Q 018943 216 R-LAMS--NGYQL-HSW--FTYSMLLLFFSTAGFWMARLNEGLSL-FD--AILIVPMFQIAWTSFSICTGFVYFQEYQVF 286 (348)
Q Consensus 216 ~-~~~~--g~~~~-~~~--~~y~ll~~~~~~~l~Q~~~Ln~aL~~-~d--~~~vvP~~~v~~~~~si~~G~i~f~E~~~~ 286 (348)
+ ++.+ +|... +++ .-|++.++.-+.=..|..|.-.|=.. .+ ....-++...+..+++.+.| +..+||.+.
T Consensus 238 ~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwG-l~lkEWKg~ 316 (344)
T PF06379_consen 238 KNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWG-LILKEWKGA 316 (344)
T ss_pred hcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHH-HHHHHhccC
Confidence 2 1222 22211 222 22444444444557887776544433 22 25577888888888888888 568999999
Q ss_pred ChHHHHHHHHHHHHHHHhhhhcc
Q 018943 287 DALRATMFILGTASVFIGISLLA 309 (348)
Q Consensus 287 ~~~~~~~~~~G~~vi~~GV~lLs 309 (348)
+....-.+.+|+++++..++++.
T Consensus 317 s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 317 SKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred CcccHHHHHHHHHHHHHHHHHHh
Confidence 98888888999999998888765
No 68
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=89.57 E-value=0.14 Score=41.80 Aligned_cols=77 Identities=19% Similarity=0.299 Sum_probs=61.2
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhhhhHHHhhhh-hhHHHHHHHHHHHHhcccc-chhhhhHHHHhhhcceeEE
Q 018943 49 LKPIVHYHSWRVGILVFLLGNCLNFISFGYAAQSLLAALG-SVQFVSNIAFSYFVFNKMV-TVKVLVATAFIVLGNIFLV 126 (348)
Q Consensus 49 ~~~~l~~p~w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~-~~~lv~~~~~s~~~l~e~~-~~~~~~g~~li~~G~~~iv 126 (348)
.+.++.|-..++=+++--.|+.+-+.-|+-+|.++..|.. ++++.|+.+++..+ +|+. .++.+.|+.+++.|+.+.+
T Consensus 46 ~~tl~l~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 46 MKTLFLNWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHhHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhee
Confidence 3445555566778888888999999999999999999986 57899999999765 5555 5666789999999987643
No 69
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=88.90 E-value=1.8 Score=35.88 Aligned_cols=53 Identities=26% Similarity=0.224 Sum_probs=42.5
Q ss_pred hhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhh
Q 018943 249 NEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISL 307 (348)
Q Consensus 249 n~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~l 307 (348)
.-.|...|-+..+|+.++.--+++.+.|..+.+|..+-. -.+|..+++.|+.+
T Consensus 59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVAL 111 (113)
T ss_pred HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeee
Confidence 346778999999999999999999999988888865332 24778888888875
No 70
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=88.27 E-value=18 Score=33.18 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=52.8
Q ss_pred HHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEe
Q 018943 68 GNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS 127 (348)
Q Consensus 68 g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~ 127 (348)
.+.....||-..+.+.+..+.+..-.|..+++...+|+|+..-+++.+++.+.|++++..
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 344457788899999999999999999999999999999999999999999999887654
No 71
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=87.13 E-value=1.6 Score=41.23 Aligned_cols=121 Identities=11% Similarity=-0.002 Sum_probs=82.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhhhhh-ccccC------------CCCCCCCCccccccccccchhHHHHHHHHH--
Q 018943 3 EWVIGAFINLVGSIAINFGTNLLKLGHIER-EKHST------------LDSDGTNGKHSLKPIVHYHSWRVGILVFLL-- 67 (348)
Q Consensus 3 ~~~iGv~lal~~a~~~a~G~~lqk~a~~~~-~~~~~------------~~~~~~~~~~~~~~~l~~p~w~~G~~~~~~-- 67 (348)
...+|+.+|+.+..+-+.=.+.-||..... ..... +--..+.+...+. -+.-..+...-++
T Consensus 145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~----p~ll~laLgvavlSS 220 (292)
T COG5006 145 LDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFS----PSLLPLALGVAVLSS 220 (292)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcC----hHHHHHHHHHHHHhc
Confidence 356899999999999887777777665211 00000 0000001111111 1233444444444
Q ss_pred --HHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEe
Q 018943 68 --GNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS 127 (348)
Q Consensus 68 --g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~ 127 (348)
=+.+..+|+...|...-.-+.++.=.+..+.+..+|||++|..+|+|+++++.++.....
T Consensus 221 alPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 221 ALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred ccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 456778999999999999999999999999999999999999999999999998876544
No 72
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=87.09 E-value=4.2 Score=33.18 Aligned_cols=48 Identities=21% Similarity=0.285 Sum_probs=38.8
Q ss_pred HHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCC
Q 018943 83 LLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNH 131 (348)
Q Consensus 83 lv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~ 131 (348)
+-+--|.+=++.+++-....-|.++++.||.|...|.+|+.+ +.++|.
T Consensus 60 vYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~v-il~~pR 107 (109)
T COG1742 60 VYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAV-ILFGPR 107 (109)
T ss_pred HHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceee-eEeCCC
Confidence 345567777788888888888999999999999999999665 456664
No 73
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=85.33 E-value=0.47 Score=44.64 Aligned_cols=62 Identities=15% Similarity=0.193 Sum_probs=51.8
Q ss_pred hhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCCC
Q 018943 250 EGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDES 313 (348)
Q Consensus 250 ~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~ 313 (348)
||.+.-..+.-.|+-+...-+.+.+.|+++||||.+ +.+.+.=+.+.++++.|+++=+.+++
T Consensus 78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t--~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTT--PTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hheeeeeeeccccccchhhHhhceeeeEEEEeccCc--chhHHHHHHHHHHHHHhheEeeeecc
Confidence 678888888899999999999999999999999975 45676667778889999998776554
No 74
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=85.13 E-value=36 Score=32.48 Aligned_cols=62 Identities=11% Similarity=0.048 Sum_probs=41.6
Q ss_pred HhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCCC
Q 018943 248 LNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDES 313 (348)
Q Consensus 248 Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~ 313 (348)
-+-||++-++.. .-+..+.++..+-..|.+++||.. ++.|+..+.+= .....|+.+=.|+++
T Consensus 227 EmiAL~rlp~~~-F~~LlSLePa~aAl~G~i~L~e~l--s~~qwlaI~~V-iaAsaG~~lt~~~~~ 288 (292)
T COG5006 227 EMIALRRLPART-FGTLLSLEPALAALSGLIFLGETL--TLIQWLAIAAV-IAASAGSTLTARKPA 288 (292)
T ss_pred HHHHHhhCChhH-HHHHHHhhHHHHHHHHHHHhcCCC--CHHHHHHHHHH-HHHHhccccccCCCC
Confidence 467888776654 567788999999999999999975 55666543332 234456555444443
No 75
>PRK13499 rhamnose-proton symporter; Provisional
Probab=81.99 E-value=6.1 Score=39.12 Aligned_cols=69 Identities=10% Similarity=0.042 Sum_probs=54.1
Q ss_pred HHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhcccccc-CChHHHHHHHHHHHHHHHhhhhccC
Q 018943 241 AGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQV-FDALRATMFILGTASVFIGISLLAP 310 (348)
Q Consensus 241 ~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~-~~~~~~~~~~~G~~vi~~GV~lLs~ 310 (348)
.+.|+.+ =++.++--.+.-.|+....-.+.+.+.+.++++||.. .+..+......|++++++|+++-++
T Consensus 84 ~iG~i~~-~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 84 GIGGITY-GLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HhhhhhH-HHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3444333 3677778888899999999999999999999999961 1223445578999999999999987
No 76
>PRK02237 hypothetical protein; Provisional
Probab=81.95 E-value=5.9 Score=32.58 Aligned_cols=47 Identities=15% Similarity=0.220 Sum_probs=37.9
Q ss_pred HhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCC
Q 018943 84 LAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNH 131 (348)
Q Consensus 84 v~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~ 131 (348)
-+--|.+=++.+++-.+..-|+|+++.|++|.+++.+|+.++. ++|.
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~-~~pR 108 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM-YAPR 108 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe-ecCC
Confidence 3445666677788889999999999999999999999987653 5654
No 77
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=81.08 E-value=13 Score=36.09 Aligned_cols=74 Identities=12% Similarity=0.177 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCCC
Q 018943 58 WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNHQ 132 (348)
Q Consensus 58 w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~ 132 (348)
|.+++. -.++.-++..||.+.+.-...=-=+.=++-.++++.++-|+|.+..|.+.+.+|.+|+.++..+.+.+
T Consensus 87 ~~is~t-n~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 87 SLISFT-NTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred hHHHHH-hhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 344433 34788888899988876544333445578889999999999999999999999999999988875554
No 78
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=80.72 E-value=6.9 Score=37.46 Aligned_cols=121 Identities=13% Similarity=0.095 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCC----CC--------------CCCCccccccccccchhHHHHHHH
Q 018943 4 WVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLD----SD--------------GTNGKHSLKPIVHYHSWRVGILVF 65 (348)
Q Consensus 4 ~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~----~~--------------~~~~~~~~~~~l~~p~w~~G~~~~ 65 (348)
+..|+++.+++-++.++-.+.|+|-..+.+.++.+. +. .++..+..+-..+.|..+.-+.+.
T Consensus 152 ~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~ 231 (303)
T PF08449_consen 152 SALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLF 231 (303)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHH
Confidence 445999999999999999999998876543321000 00 000000111122334333333332
Q ss_pred -HHHHHHHHHHH---hhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 66 -LLGNCLNFISF---GYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 66 -~~g~~~~~~al---~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
..+.+++...+ ..-......=...+--+.++++|..+.+++++...|.|.+++..|..+
T Consensus 232 s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~ 294 (303)
T PF08449_consen 232 SLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFL 294 (303)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHH
Confidence 33444442222 122222333344455678889999999999999999999999988664
No 79
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=80.56 E-value=5 Score=32.90 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=38.2
Q ss_pred HhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCC
Q 018943 84 LAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNH 131 (348)
Q Consensus 84 v~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~ 131 (348)
-+--|.+=++.+++-.+..-|+++++.|++|..+|..|+.++ .++|.
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI-~~~PR 106 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII-LFAPR 106 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe-EecCC
Confidence 344566667788888999999999999999999999998865 45554
No 80
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=80.19 E-value=1.6 Score=41.23 Aligned_cols=74 Identities=22% Similarity=0.358 Sum_probs=59.1
Q ss_pred chhHHHHHH---HHHHHHHHHHHHhhhhhHHHhhhhh-hHHHHHHHHHHHHhccccchhhh----hHHHHhhhcceeEEe
Q 018943 56 HSWRVGILV---FLLGNCLNFISFGYAAQSLLAALGS-VQFVSNIAFSYFVFNKMVTVKVL----VATAFIVLGNIFLVS 127 (348)
Q Consensus 56 p~w~~G~~~---~~~g~~~~~~al~~~p~slv~Pl~~-~~lv~~~~~s~~~l~e~~~~~~~----~g~~li~~G~~~iv~ 127 (348)
..|+.|++. -.+|...|+-|......|...|+.. .+++.+.+++.+.+||--+..+. ...++++.|+.+-..
T Consensus 57 ~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~ 136 (288)
T COG4975 57 TIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSK 136 (288)
T ss_pred hhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeee
Confidence 357777754 3578888999999999999999987 78999999999999999887764 456788888777554
Q ss_pred ec
Q 018943 128 FG 129 (348)
Q Consensus 128 ~~ 129 (348)
-.
T Consensus 137 ~~ 138 (288)
T COG4975 137 QD 138 (288)
T ss_pred ec
Confidence 33
No 81
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=79.80 E-value=3.8 Score=40.32 Aligned_cols=50 Identities=24% Similarity=0.304 Sum_probs=39.3
Q ss_pred HHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 75 SFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 75 al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
.+...+.....=.+.+.=++..++|..+++|+++..+++|.++++.|+.+
T Consensus 296 ~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 296 CLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred HHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 44445555455555566678899999999999999999999999999865
No 82
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.76 E-value=21 Score=29.02 Aligned_cols=105 Identities=16% Similarity=0.268 Sum_probs=61.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHH---HHHHh
Q 018943 1 MGEWVIGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLN---FISFG 77 (348)
Q Consensus 1 m~~~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~w~~G~~~~~~g~~~~---~~al~ 77 (348)
|+.+.-.++|-+.|++++.++ -++|.+....+ -.... --.|=+.+.=|.+..-.| -..|+
T Consensus 5 ~~~~l~~vlLL~~SNvFMTFA----WYghLk~~~~p----------l~~~i---~~SWGIA~fEY~LqvPaNRiG~~v~s 67 (116)
T COG3169 5 MSVYLYPVLLLIGSNVFMTFA----WYGHLKFTNKP----------LVIVI---LASWGIAFFEYLLQVPANRIGHQVYS 67 (116)
T ss_pred CchHHHHHHHHHhhHHHHHHH----HHHHHhccCCc----------hhHHH---HHHhhHHHHHHHHhCccchhhhhhcc
Confidence 677888899999999998665 47777542100 00000 012333333232222112 22333
Q ss_pred hhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 78 YAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 78 ~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
-+.+-..|- .+++..=+++|.+++||++++..+.|..++..|+..
T Consensus 68 ~~QLK~mQE--VItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 68 AAQLKTMQE--VITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 333333332 356666788999999999999988888887766554
No 83
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=74.55 E-value=14 Score=37.01 Aligned_cols=124 Identities=11% Similarity=0.031 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhh-ccccCC---------------------CCCCCCCccccccccccchhHHH
Q 018943 4 WVIGAFINLVGSIAINFGTNLLKLGHIER-EKHSTL---------------------DSDGTNGKHSLKPIVHYHSWRVG 61 (348)
Q Consensus 4 ~~iGv~lal~~a~~~a~G~~lqk~a~~~~-~~~~~~---------------------~~~~~~~~~~~~~~l~~p~w~~G 61 (348)
..+|.++|+.||++.|+=.++.||-.-++ ++-+.+ |..+.+....+..---.-.-..|
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ 324 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNN 324 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhh
Confidence 47899999999999999999999876554 221100 00000000000000000113455
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEe
Q 018943 62 ILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVS 127 (348)
Q Consensus 62 ~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~ 127 (348)
.+--+++..+|..|.-+-.-.++.-=.++++..+++.=..+-+.+++...++|.+.|.+|-+++-.
T Consensus 325 ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 325 LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence 566678888888777766666666666788888888877777889999999999999998665433
No 84
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=73.94 E-value=2 Score=40.77 Aligned_cols=57 Identities=11% Similarity=0.255 Sum_probs=49.7
Q ss_pred HHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeec
Q 018943 73 FISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFG 129 (348)
Q Consensus 73 ~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~ 129 (348)
.-|+.+...+-++-|-+-+.+..+++++++||.|-+..++.|++.|+.|+++++...
T Consensus 96 V~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sD 152 (336)
T KOG2766|consen 96 VKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSD 152 (336)
T ss_pred eeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEee
Confidence 457777778888889999999999999999999999999999999999988766533
No 85
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=71.69 E-value=41 Score=31.45 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhccc--------------------cCCCCCCCCCccccccccccchhHHHHH
Q 018943 4 WVIGAFINLVGSIAINFGTNLLKLGHIEREKH--------------------STLDSDGTNGKHSLKPIVHYHSWRVGIL 63 (348)
Q Consensus 4 ~~iGv~lal~~a~~~a~G~~lqk~a~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~p~w~~G~~ 63 (348)
..+|+++.++++++.+++.+...|-.++.+.. ...|...-.....+..+ ++.-|.=+.
T Consensus 112 ~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~--~~~~~~~i~ 189 (244)
T PF04142_consen 112 PLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGY--SWWVWIVIF 189 (244)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhc--chHHHHHHH
Confidence 46799999999999999998877765543210 00110000001111111 111122222
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHH
Q 018943 64 VFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAF 117 (348)
Q Consensus 64 ~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~l 117 (348)
+..+|=++-...+.+++-.+=.=-.+++++.+.+++..+++.+++..-.+|+.+
T Consensus 190 ~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 190 LQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred HHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 223444444456666666655555567888888999999898888887777654
No 86
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=69.01 E-value=50 Score=28.08 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhh-HHHHHHHHHHH----HhccccchhhhhHHHHhhhcce
Q 018943 59 RVGILVFLLGNCLNFISFGYAAQSLLAALGSV-QFVSNIAFSYF----VFNKMVTVKVLVATAFIVLGNI 123 (348)
Q Consensus 59 ~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~-~lv~~~~~s~~----~l~e~~~~~~~~g~~li~~G~~ 123 (348)
|.|-.+-+.--.++.........+...-+... +++.++++-++ .-+++++.++..|.++++.|+.
T Consensus 68 ~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 68 YLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 44444443444444444444444444433333 46667777775 4578999999999999999975
No 87
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.78 E-value=2.3 Score=41.51 Aligned_cols=128 Identities=17% Similarity=0.174 Sum_probs=76.5
Q ss_pred hhHHHHHHHHhhhHH-HHHHHHHHHHHHHHHh---cCC-ccchhHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhh
Q 018943 189 LPFSYAIVSGAVGSF-SVLFAKSLSNLLRLAM---SNG-YQLHSWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPM 263 (348)
Q Consensus 189 ~~l~y~~~sGllgg~-tvl~~K~~~~~l~~~~---~g~-~~~~~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~ 263 (348)
.++..+..|.++-|. ..+--|+.-++-.... +|. .-+.+|.-|+=++.+.++=+. +| .|....|++++.|+
T Consensus 21 ~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vGei~--NF--aAYaFAPasLVtPL 96 (335)
T KOG2922|consen 21 IGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVGEIA--NF--AAYAFAPASLVTPL 96 (335)
T ss_pred eeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHHhHh--hH--HHHhhchHhhhccc
Confidence 356666666655444 4444444443322111 121 235566556544444333221 22 46677889999999
Q ss_pred HHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhhhccCCCCCCccchhhhHHHHHhhhhc
Q 018943 264 FQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGISLLAPDESKGILMSSLLRSIISEIWTR 332 (348)
Q Consensus 264 ~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs~~~~~~~~~~~~~~~~~~~~~~~ 332 (348)
--...+.+++++. .+.+|-.+ ..=.+||.+.+.|.+++..+.|+++++++ ++|+|..
T Consensus 97 GAlsvi~saila~-~~L~Ekl~------~~g~lGc~l~v~Gst~iV~haP~e~~i~t-----~~el~~~ 153 (335)
T KOG2922|consen 97 GALSVIISAILAS-FFLKEKLN------LLGILGCVLCVVGSTTIVIHAPKEQEIES-----VEEVWEL 153 (335)
T ss_pred hhHHHHHHHHHHH-HHHHHHHH------HhhhhheeEEecccEEEEEecCccccccc-----HHHHHHH
Confidence 8887777666655 55566433 22348899999999999999999986544 5566543
No 88
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=67.20 E-value=1.2e+02 Score=28.87 Aligned_cols=65 Identities=11% Similarity=0.105 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhH----HHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEee
Q 018943 60 VGILVFLLGNCLNFISFGYAAQSLLAALGSVQ----FVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSF 128 (348)
Q Consensus 60 ~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~----lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~ 128 (348)
+--..|.++.+..=-|+.+.|. |-+.++ =+-.++++..+.|.+-++++...+.+|++|+.++...
T Consensus 90 Acs~sYLlAMVssN~Alq~vpY----PTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK 158 (337)
T KOG1580|consen 90 ACSASYLLAMVSSNQALQYVPY----PTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYK 158 (337)
T ss_pred HHHHHHHHHHHhccchhcccCC----cHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcc
Confidence 3334455555555556666664 433332 2446778888889999999999999999999987763
No 89
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=59.89 E-value=2e+02 Score=29.17 Aligned_cols=76 Identities=16% Similarity=0.203 Sum_probs=39.0
Q ss_pred HHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHh-hhcceeEEee-c-CC----------CCCCCChHHHHHHhcchh
Q 018943 83 LLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFI-VLGNIFLVSF-G-NH----------QSPVYTPEQLAEKYSNIT 149 (348)
Q Consensus 83 lv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li-~~G~~~iv~~-~-~~----------~~~~~t~~el~~~~~~~~ 149 (348)
-+.-.|+++...+..++=++.+......-|++.... +..+.++... . ++ +.++.+.+|+.+.++.+.
T Consensus 142 ~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~ 221 (412)
T PF01306_consen 142 RARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRN 221 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHH
T ss_pred hHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchh
Confidence 456678999877766666666655555556554321 1111111111 0 01 011235567788899998
Q ss_pred HHHHHHHHH
Q 018943 150 FLVYCLILI 158 (348)
Q Consensus 150 fl~y~~~~~ 158 (348)
|..+...++
T Consensus 222 fw~~~l~v~ 230 (412)
T PF01306_consen 222 FWFFVLFVI 230 (412)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 876554444
No 90
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=56.10 E-value=10 Score=31.08 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHhccccchhhhhHHHHhhhccee
Q 018943 90 VQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIF 124 (348)
Q Consensus 90 ~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~ 124 (348)
+++..=.++|.+++||++++....|-++++.++..
T Consensus 71 itL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 71 ITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 34444467788999999999999998887666543
No 91
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=55.98 E-value=8.8 Score=32.32 Aligned_cols=28 Identities=14% Similarity=0.141 Sum_probs=24.6
Q ss_pred cccCChHHHHHHHHHHHHHHHhhhhccC
Q 018943 283 YQVFDALRATMFILGTASVFIGISLLAP 310 (348)
Q Consensus 283 ~~~~~~~~~~~~~~G~~vi~~GV~lLs~ 310 (348)
..+.++|.+.++++.++++++|+++|.|
T Consensus 29 ~ED~tpWNysiL~Ls~vvlvi~~~LLgr 56 (125)
T PF15048_consen 29 VEDATPWNYSILALSFVVLVISFFLLGR 56 (125)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999999975
No 92
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=44.35 E-value=1.2e+02 Score=29.37 Aligned_cols=97 Identities=15% Similarity=0.011 Sum_probs=53.4
Q ss_pred chhHHHHHHHHHHHHHHHHH-HHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHH---HHH
Q 018943 225 LHSWFTYSMLLLFFSTAGFW-MARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILG---TAS 300 (348)
Q Consensus 225 ~~~~~~y~ll~~~~~~~l~Q-~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G---~~v 300 (348)
.++|...+.+.........| ..|. .|...+.. +-..+-|-.-|+++++.|.++|+|.. +..+++...++ +..
T Consensus 66 ~~~p~~~~~~~l~a~li~~nW~lfi-WAvn~g~~-leaSLGY~InPL~~VllG~lflkErl--s~~Q~iAV~lA~~GV~~ 141 (293)
T COG2962 66 LKQPKTLLMLALTALLIGLNWWLFI-WAVNNGHV-LEASLGYFINPLVNVLLGRLFLKERL--SRLQWIAVGLAAAGVLI 141 (293)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHhh-eecCCCch-hHHHhHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHH
Confidence 35566665555544433333 3332 11111111 11233445667789999999999964 55666444333 221
Q ss_pred ----------------HHHhhhhccCCCCCCccchhhhHHH
Q 018943 301 ----------------VFIGISLLAPDESKGILMSSLLRSI 325 (348)
Q Consensus 301 ----------------i~~GV~lLs~~~~~~~~~~~~~~~~ 325 (348)
.-.|.+-+.|++-+-+..+.+.=|+
T Consensus 142 ~~~~~g~lpwval~la~sf~~Ygl~RK~~~v~a~~g~~lE~ 182 (293)
T COG2962 142 QTWLLGSLPWVALALALSFGLYGLLRKKLKVDALTGLTLET 182 (293)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHhcCCchHHhHHHHH
Confidence 3357777788887777666655444
No 93
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=41.92 E-value=3.5 Score=39.61 Aligned_cols=60 Identities=20% Similarity=0.284 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHHhhhcce
Q 018943 64 VFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAFIVLGNI 123 (348)
Q Consensus 64 ~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~ 123 (348)
.++++-..|-..|++.|.+.-+-=-++..+||+++++.++|++-+..-..+|.+|+.|-.
T Consensus 111 Vfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~ 170 (347)
T KOG1442|consen 111 VFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFG 170 (347)
T ss_pred eeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhe
Confidence 345555666777889998888877889999999999999999999888888888888843
No 94
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=38.56 E-value=3.6e+02 Score=28.87 Aligned_cols=57 Identities=11% Similarity=0.039 Sum_probs=32.2
Q ss_pred cccccch-hHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhhHHHHHHHHHHHHhccccc
Q 018943 51 PIVHYHS-WRVGILVFLLGNCLNFISFGYAAQSLLAALGSVQFVSNIAFSYFVFNKMVT 108 (348)
Q Consensus 51 ~~l~~p~-w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~~lv~~~~~s~~~l~e~~~ 108 (348)
+++-|++ -+.|.+++++|.+....|-......--+-+..++.-.+.. ......|-.+
T Consensus 103 DlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p 160 (599)
T PF06609_consen 103 DLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVP 160 (599)
T ss_pred HHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcc
Confidence 3444443 4666677789999887776666665555554444333332 2333455544
No 95
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=37.25 E-value=26 Score=33.09 Aligned_cols=40 Identities=18% Similarity=0.147 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhccccchhhhhHHHHhhhcceeEEeecCC
Q 018943 92 FVSNIAFSYFVFNKMVTVKVLVATAFIVLGNIFLVSFGNH 131 (348)
Q Consensus 92 lv~~~~~s~~~l~e~~~~~~~~g~~li~~G~~~iv~~~~~ 131 (348)
-.|+.+.|..+.+.+++.++|+|+.++..|..+=+.+|.+
T Consensus 278 KfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~ 317 (337)
T KOG1580|consen 278 KFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK 317 (337)
T ss_pred HHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence 4789999999999999999999999999998876666643
No 96
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=36.90 E-value=3e+02 Score=26.11 Aligned_cols=166 Identities=11% Similarity=0.064 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhhh-HHHHHHHHHHH-Hhccccc-----hhhhhHHHHhhhcceeEEee
Q 018943 56 HSWRVGILVFLLGNCLNFISFGYAAQSLLAALGSV-QFVSNIAFSYF-VFNKMVT-----VKVLVATAFIVLGNIFLVSF 128 (348)
Q Consensus 56 p~w~~G~~~~~~g~~~~~~al~~~p~slv~Pl~~~-~lv~~~~~s~~-~l~e~~~-----~~~~~g~~li~~G~~~iv~~ 128 (348)
|+=.+|-.+...|+++..-+....-+.+-..+=+. +.+..-..+++ +++++.. ...++|.+++++|..+....
T Consensus 56 p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 56 PWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred eHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Q ss_pred cCCCCCCCChHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhh--------hhhhhHHHHHHHHhh
Q 018943 129 GNHQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYW--------RMLLPFSYAIVSGAV 200 (348)
Q Consensus 129 ~~~~~~~~t~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~--------~~~~~l~y~~~sGll 200 (348)
-+++.++.+-+|-..+-.+ .+.+...+....++..| +|+.++..+..+|++
T Consensus 136 k~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvl 194 (254)
T PF07857_consen 136 KSEEKEPKKSSEETPLSIE---------------------DVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVL 194 (254)
T ss_pred cCCCCCccccccccccccc---------------------cccccccccccccccccccccccccchhHhHHHHHHHHHH
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-------ccchhHHHHHHHHHHHHHHHHHHHHH
Q 018943 201 GSFSVLFAKSLSNLLRLAMSNG-------YQLHSWFTYSMLLLFFSTAGFWMARL 248 (348)
Q Consensus 201 gg~tvl~~K~~~~~l~~~~~g~-------~~~~~~~~y~ll~~~~~~~l~Q~~~L 248 (348)
+|.+..-.+-+-+ +++ +.+.+-+.+..=+.+..+..+-.|+.
T Consensus 195 yGs~fvPv~Yi~~------~~~~y~~as~~~ldYvFs~f~GIfltSt~~F~~Y~~ 243 (254)
T PF07857_consen 195 YGSNFVPVIYIQD------HPDIYPGASQNGLDYVFSHFSGIFLTSTVYFVIYCI 243 (254)
T ss_pred HhcccchHHHHHh------CccccCCCCCcchheeHHHHhhHHHHHHHHHHHHHH
No 97
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=36.50 E-value=1.5e+02 Score=26.99 Aligned_cols=89 Identities=15% Similarity=0.131 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhccccCCCCCCCCCccccccccccchhHHHHHHHHHHHHHHH---HHHhhhhhH
Q 018943 6 IGAFINLVGSIAINFGTNLLKLGHIEREKHSTLDSDGTNGKHSLKPIVHYHSWRVGILVFLLGNCLNF---ISFGYAAQS 82 (348)
Q Consensus 6 iGv~lal~~a~~~a~G~~lqk~a~~~~~~~~~~~~~~~~~~~~~~~~l~~p~w~~G~~~~~~g~~~~~---~al~~~p~s 82 (348)
.|.+--++.++..++..-+..|=.-+.. -| -=+||.||=+++...+..++|+ .+=+|.|.|
T Consensus 125 ~GlItlll~a~vgGfamy~my~y~yr~~----ad------------~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPts 188 (226)
T COG4858 125 YGLITLLLTAVVGGFAMYIMYYYAYRMR----AD------------NSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTS 188 (226)
T ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHhh----cc------------cccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 4555555555666666555554432211 01 0135789999998888888885 455677777
Q ss_pred HHh--hhhhhHHHHHHHHH-HHHhccccchh
Q 018943 83 LLA--ALGSVQFVSNIAFS-YFVFNKMVTVK 110 (348)
Q Consensus 83 lv~--Pl~~~~lv~~~~~s-~~~l~e~~~~~ 110 (348)
+=- |=-++.++-.++++ +|++|++.+.+
T Consensus 189 lN~~L~pi~l~IiGav~lalRfylkkk~NIq 219 (226)
T COG4858 189 LNPQLPPIALTIIGAVILALRFYLKKKKNIQ 219 (226)
T ss_pred CCcCCchHHHHHHHHHHHHHHHHHHHhhccc
Confidence 422 33334455554444 57778877654
No 98
>PF11970 Git3_C: G protein-coupled glucose receptor regulating Gpa2 C-term; InterPro: IPR022596 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor. Git3 is one of six proteins required for glucose-triggered adenylate cyclase activation, and is a G protein-coupled receptor responsible for the activation of adenylate cyclase through Gpa2 - heterotrimeric G protein alpha subunit, part of the glucose-detection pathway. Git3 contains seven predicted transmembrane domains, a third cytoplasmic loop and a cytoplasmic tail []. This family is the conserved C-terminal domain of the member proteins.
Probab=35.49 E-value=68 Score=24.59 Aligned_cols=49 Identities=14% Similarity=0.084 Sum_probs=32.4
Q ss_pred ccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhh
Q 018943 257 AILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGI 305 (348)
Q Consensus 257 ~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV 305 (348)
...++|+.|++-.++=.+.+..-+.+..+-++..+...+.++...+-|.
T Consensus 13 ~mfiYP~~Yi~lwlfP~~~~~~~~~~~~~~~p~~~l~~i~~~~~~~~G~ 61 (76)
T PF11970_consen 13 SMFIYPLVYIVLWLFPFAAHRMQYMYEIGHGPSFWLFCIAGFMQPSQGF 61 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHccCH
Confidence 3568888888888888888777777544445555555556666555553
No 99
>COG5522 Predicted integral membrane protein [Function unknown]
Probab=35.12 E-value=1.2e+02 Score=27.98 Aligned_cols=51 Identities=14% Similarity=0.131 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhhhhh-H--------HHhhhhhhHHHHHHHHHHHHhccccchhhhhHHHH
Q 018943 67 LGNCLNFISFGYAAQ-S--------LLAALGSVQFVSNIAFSYFVFNKMVTVKVLVATAF 117 (348)
Q Consensus 67 ~g~~~~~~al~~~p~-s--------lv~Pl~~~~lv~~~~~s~~~l~e~~~~~~~~g~~l 117 (348)
-|...++.|+..-++ . ..-=+.=.+..++++++..-++||++.+...-+++
T Consensus 102 wgig~sf~AlltPDl~~~~~p~l~~~lffitH~svfls~v~~~vhfreRpgksgl~~svl 161 (236)
T COG5522 102 WGIGISFMALLTPDLQYLQVPWLEFLLFFITHISVFLSAVILIVHFRERPGKSGLVMSVL 161 (236)
T ss_pred hhhhHHHHHHHcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccchhHHHH
Confidence 455556777766666 2 22223335567788888899999999998665443
No 100
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=33.07 E-value=2.8e+02 Score=27.80 Aligned_cols=36 Identities=19% Similarity=0.094 Sum_probs=29.3
Q ss_pred HHhhhhccccccchhhhHHHHHHHHHHHhhhhhccc
Q 018943 247 RLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQE 282 (348)
Q Consensus 247 ~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E 282 (348)
++.+-++.-|+.-+.|+--+.=...++..|..--+|
T Consensus 294 ~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~~~ 329 (399)
T PF00909_consen 294 WLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFASPE 329 (399)
T ss_dssp HHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHCCCH
T ss_pred cccceeEeccccceEeeeeccHHHHHHHHHHHhccc
Confidence 588889999999999998888888888887776666
No 101
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=31.52 E-value=4.3e+02 Score=24.51 Aligned_cols=19 Identities=21% Similarity=0.378 Sum_probs=11.4
Q ss_pred hhhHHHHHHHHhhhHHHHH
Q 018943 188 LLPFSYAIVSGAVGSFSVL 206 (348)
Q Consensus 188 ~~~l~y~~~sGllgg~tvl 206 (348)
.+-+..-.++|++||..-.
T Consensus 9 ~~~~~~illg~~iGg~~G~ 27 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGF 27 (248)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3455666666677766553
No 102
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=31.27 E-value=75 Score=31.14 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhhhh
Q 018943 3 EWVIGAFINLVGSIAINFGTNLLKLGHIE 31 (348)
Q Consensus 3 ~~~iGv~lal~~a~~~a~G~~lqk~a~~~ 31 (348)
-+.+|.+.|..+.+..+.=++++|+...+
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~ 188 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTS 188 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 35689999999999999999999988754
No 103
>PF03189 Otopetrin: Otopetrin; InterPro: IPR004878 The otopetrins are a group of proteins that are restricted to the metazoa. The structure of otopetrin-1 (Q80VM9 from SWISSPROT) shows it to have 12 transmembrane domains, with three conserved sub-domains (OD-1 to OD-III) []. Otopetrins modulate calcium homeostasis and influx of calcium in response to extracellular ATP. The otopetrins are required for normal formation of otoconia/otoliths in the inner ear. Otoconia are minute biomineral particles embedded in a gelatinous membrane that overlies the sensory epithelium in the inner ear. Gravity and acceleration cause the octoconia to deflect the stereocilia of sensory hair cells. Otoconia are required for normal processing of information regarding spatial orientation and acceleration.
Probab=30.03 E-value=6.2e+02 Score=25.90 Aligned_cols=66 Identities=9% Similarity=0.031 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhh
Q 018943 227 SWFTYSMLLLFFSTAGFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGIS 306 (348)
Q Consensus 227 ~~~~y~ll~~~~~~~l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~ 306 (348)
++....-.++.++-...|..|.-.|+++-..+. ++..+-+..+.+.|.+=+=+..+.+-
T Consensus 345 ~~l~l~~~ll~iiQv~~QtlFIl~a~rR~~~~~---------------------~~~~~kpgrq~itFLl~~N~~lw~~~ 403 (441)
T PF03189_consen 345 NWLNLIYSLLRIIQVTLQTLFILDASRRRCSSE---------------------EQQRRKPGRQIITFLLVCNISLWIIN 403 (441)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---------------------ccccchHHHHHHHHHHHHHHHHHHHH
Confidence 344444445566677889888888887754333 12334455678777776666666665
Q ss_pred hccCCCC
Q 018943 307 LLAPDES 313 (348)
Q Consensus 307 lLs~~~~ 313 (348)
....++.
T Consensus 404 tf~~~~~ 410 (441)
T PF03189_consen 404 TFEAKKA 410 (441)
T ss_pred Hhhcccc
Confidence 5554444
No 104
>PF11297 DUF3098: Protein of unknown function (DUF3098); InterPro: IPR021448 This bacterial family of proteins has no known function.
Probab=29.30 E-value=83 Score=23.83 Aligned_cols=29 Identities=17% Similarity=0.351 Sum_probs=24.8
Q ss_pred ChHHHHHHHHHHHHHHHhhhhccCCCCCC
Q 018943 287 DALRATMFILGTASVFIGISLLAPDESKG 315 (348)
Q Consensus 287 ~~~~~~~~~~G~~vi~~GV~lLs~~~~~~ 315 (348)
+-.++.++.+|.++++.|-++.+..++++
T Consensus 4 gk~Nyill~iG~~vIilGfilMsg~~s~d 32 (69)
T PF11297_consen 4 GKKNYILLAIGIAVIILGFILMSGGGSDD 32 (69)
T ss_pred chHHHHHHHHHHHHHHHHHHheeCCCCCC
Confidence 44688999999999999999999877655
No 105
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=28.60 E-value=1.7e+02 Score=26.76 Aligned_cols=34 Identities=9% Similarity=-0.010 Sum_probs=16.7
Q ss_pred hhhhccccccchhhhHHHHHHHHHHHhhhhhcccc
Q 018943 249 NEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEY 283 (348)
Q Consensus 249 n~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~ 283 (348)
..|+++-+.....-+ +...|+.+.+.+..+++|.
T Consensus 88 ~~a~~~~~~~~a~~l-~~~~Pi~~~lla~~~l~Ek 121 (256)
T TIGR00688 88 IWAVNNGSSLEVSLG-YLINPLVMVALGRVFLKER 121 (256)
T ss_pred HHHHHcchHHHHHHH-HHHHHHHHHHHHHHHHhcC
Confidence 344444443332222 2345666666666666664
No 106
>TIGR02106 cyd_oper_ybgT cyd operon protein YbgT. This model describes a very small (as short as 33 amino acids) protein of unknown function, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It begins with an aromatic motif MWYFXW and appears to contain a membrane-spanning helix. This protein appears to be restricted to the Proteobacteria and exist in a single copy only. We suggest it may be a membrane subunit of the terminal oxidase. The family is named after the E. coli member YbgT. This model excludes the apparently related protein YccB.
Probab=27.96 E-value=83 Score=19.89 Aligned_cols=20 Identities=10% Similarity=0.346 Sum_probs=15.7
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 018943 3 EWVIGAFINLVGSIAINFGT 22 (348)
Q Consensus 3 ~~~iGv~lal~~a~~~a~G~ 22 (348)
.|.+|+.+|..-+++++.-.
T Consensus 5 aWilG~~lA~~~~v~~a~w~ 24 (30)
T TIGR02106 5 AWILGTLLACAFGVLNAMWL 24 (30)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 58899999988888776544
No 107
>PF08173 YbgT_YccB: Membrane bound YbgT-like protein; InterPro: IPR012994 This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in Escherichia coli. Members have a consensus motif (MWYFXW), which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to proteobacteria [].
Probab=27.21 E-value=89 Score=19.44 Aligned_cols=19 Identities=16% Similarity=0.394 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 018943 3 EWVIGAFINLVGSIAINFG 21 (348)
Q Consensus 3 ~~~iGv~lal~~a~~~a~G 21 (348)
.|.+|+.+|..-+++++..
T Consensus 5 aWilG~~lA~~~~i~~a~w 23 (28)
T PF08173_consen 5 AWILGVLLACAFGILNAMW 23 (28)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4889999998888887654
No 108
>PF04211 MtrC: Tetrahydromethanopterin S-methyltransferase, subunit C ; InterPro: IPR005865 This model describes the N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit C in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive a sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of a methyl group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.; GO: 0030269 tetrahydromethanopterin S-methyltransferase activity, 0015948 methanogenesis, 0016021 integral to membrane
Probab=25.19 E-value=3.7e+02 Score=25.62 Aligned_cols=135 Identities=11% Similarity=0.165 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh---HHHhhhhhh--HHHHHHHHHHH---HhccccchhhhhHHHHhhhcceeEEeecCC
Q 018943 60 VGILVFLLGNCLNFISFGYAAQ---SLLAALGSV--QFVSNIAFSYF---VFNKMVTVKVLVATAFIVLGNIFLVSFGNH 131 (348)
Q Consensus 60 ~G~~~~~~g~~~~~~al~~~p~---slv~Pl~~~--~lv~~~~~s~~---~l~e~~~~~~~~g~~li~~G~~~iv~~~~~ 131 (348)
+|+..+..|.+.....+..... .++.|..++ +.+...+.+.. ..|=++...+.-=+-+...|+..+.-++..
T Consensus 75 IGm~alGmG~ia~l~G~~i~~~~~~~l~~PI~~~iiA~IiG~vvG~la~~vi~MkIPim~~s~tels~agaL~ilG~s~a 154 (262)
T PF04211_consen 75 IGMMALGMGIIAALAGLAIGGIGIPNLAGPIIALIIAAIIGAVVGLLANKVIGMKIPIMEQSMTELSGAGALAILGFSAA 154 (262)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHcccccccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777777777666666543 567777653 33444444422 122222222221222223333322223333
Q ss_pred CCCCCChHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHH
Q 018943 132 QSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSV 205 (348)
Q Consensus 132 ~~~~~t~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tv 205 (348)
-.+.++.+++.+...++.++.-.++..... ++|=+. .-.|. .-++.|-+..+..||.+.-..+
T Consensus 155 iaGsf~~~~i~~~vi~~G~IAl~Fi~~~mA-IlHPFN-------ACLGP---nE~q~RTL~la~~~G~ls~ii~ 217 (262)
T PF04211_consen 155 IAGSFDFDSIITSVINTGYIALLFIIGGMA-ILHPFN-------ACLGP---NESQDRTLTLAVECGFLSMIIF 217 (262)
T ss_pred HhccccHHHHHHHHhccCHHHHHHHHHHHH-hcCccc-------cccCC---CcchhHHHHHHHHHHHHHHHHH
Confidence 345677888877777777766444443222 122110 00111 1112346788888887765544
No 109
>PRK01030 tetrahydromethanopterin S-methyltransferase subunit C; Provisional
Probab=24.72 E-value=4.7e+02 Score=24.93 Aligned_cols=138 Identities=13% Similarity=0.145 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhh---hHHHhhhhhh--HHHHHHHHHHHHhccccc----hhhhhHHHHhhhcceeEEeecC
Q 018943 60 VGILVFLLGNCLNFISFGYAA---QSLLAALGSV--QFVSNIAFSYFVFNKMVT----VKVLVATAFIVLGNIFLVSFGN 130 (348)
Q Consensus 60 ~G~~~~~~g~~~~~~al~~~p---~slv~Pl~~~--~lv~~~~~s~~~l~e~~~----~~~~~g~~li~~G~~~iv~~~~ 130 (348)
+||..+..|.+.......... +.++.|.-++ +.+...+.+.. -++.+. ..+.-=+-+...|...+.-++.
T Consensus 68 IGmlalGmG~iaal~G~~i~~~~~~~~~~PI~~liia~iiG~vvG~l-an~vigMkIPiM~~smtels~agaLailG~s~ 146 (264)
T PRK01030 68 IGMLALGMGTIAALAGVAIGDALGIVLAGPIVALIIAAIIGAVVGKL-ANNVVGMKIPIMERSMTELSGAGALAILGFST 146 (264)
T ss_pred HHHHHHhHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHH-HcccccCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 677777777777766666652 3478887653 33444444432 222222 2221111222222222222222
Q ss_pred CCCCCCChHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHH
Q 018943 131 HQSPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYIYRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAK 209 (348)
Q Consensus 131 ~~~~~~t~~el~~~~~~~~fl~y~~~~~~i~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K 209 (348)
.-.+..+.+.+.+...++.++.-.++...... +|=+. .-.|. .-++.|-+..+..||.+.-.-.-..|
T Consensus 147 a~~Gsf~~~~~~~~vi~~G~IAl~FI~~~mAI-lHPFN-------ACLGP---~E~q~RTL~la~e~G~ls~ii~gi~s 214 (264)
T PRK01030 147 AIAGSFDFDAIITSVIATGFIALLFILGGMAI-LHPFN-------ACLGP---NESQDRTLTLAVECGFLSMIIFGIAS 214 (264)
T ss_pred HHhCcccHHHHHHHHhcccHHHHHHHHHHHHh-cCccc-------cccCC---CcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 22445778888777777777665444432222 12100 00111 11123468888888877665554444
No 110
>TIGR01148 mtrC N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C. coenzyme M methyltransferase subunit C in methanogenic archaea. This methyltranferase is membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.
Probab=23.88 E-value=5.2e+02 Score=24.63 Aligned_cols=138 Identities=10% Similarity=0.103 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhh-hH-HHhhhhhh--HHHHHHHHHHH---HhccccchhhhhHHHHhhhcceeEEeecCCC
Q 018943 60 VGILVFLLGNCLNFISFGYAA-QS-LLAALGSV--QFVSNIAFSYF---VFNKMVTVKVLVATAFIVLGNIFLVSFGNHQ 132 (348)
Q Consensus 60 ~G~~~~~~g~~~~~~al~~~p-~s-lv~Pl~~~--~lv~~~~~s~~---~l~e~~~~~~~~g~~li~~G~~~iv~~~~~~ 132 (348)
+|+..+..|.+.....+...- .. ++.|.-++ +.+...+.+.. ..|-|+...+.-=+-+.+.|...+.-++..-
T Consensus 75 IGm~alG~G~vaal~G~~i~g~i~~~a~PI~alIia~IiG~vvG~la~~vi~MkIPiM~~~mtels~agaLailG~s~ai 154 (265)
T TIGR01148 75 IGMMSLGMGILAAVAGLALGGNTPAIAAPIIALVVAAIIGGVVGVLANKVIGMKIPIMERCMTEISCAGTLALLGLSVAI 154 (265)
T ss_pred HHHHHHhHHHHHHHHHHHccccchHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688888888877777776621 22 67776543 33444444322 1222222222212222223322222222222
Q ss_pred CCCCChHHHHHHhcchhHHHHHHHHHHHHHHHHHH-HHhccccccccCCCchhhhhhhhHHHHHHHHhhhHHHHHHHH
Q 018943 133 SPVYTPEQLAEKYSNITFLVYCLILIFIVAIYHYI-YRKGENLLAVSGQDNRYWRMLLPFSYAIVSGAVGSFSVLFAK 209 (348)
Q Consensus 133 ~~~~t~~el~~~~~~~~fl~y~~~~~~i~~~~~~~-~r~~~~~~~~~g~~~~~~~~~~~l~y~~~sGllgg~tvl~~K 209 (348)
.+.++.+.+.+...++.++.-.++...+.. +|=+ ... |. .-++.|-+.++..||.+.-...-..|
T Consensus 155 aGsf~~~~~~~~vi~~G~IAl~Fi~~~mAi-lHPFNACL--------GP---nE~q~RTL~La~e~G~ls~ii~~i~s 220 (265)
T TIGR01148 155 AGSFTWQAVISYVIANGYIALLFIIGGMAI-LHPFNACL--------GP---NESQDRTLWLAVECGFITGFVSSLHE 220 (265)
T ss_pred hCcccHHHHHHHHhcccHHHHHHHHHHHHh-cCcchhcc--------CC---CcchhHHHHHHHHHhHHHHHHHHHHH
Confidence 446788888777778877765444442222 1211 011 11 11122468888888877666554444
No 111
>PRK14749 hypothetical protein; Provisional
Probab=23.88 E-value=1.7e+02 Score=18.47 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 018943 3 EWVIGAFINLVGSIAINFGT 22 (348)
Q Consensus 3 ~~~iGv~lal~~a~~~a~G~ 22 (348)
.|.+|+.+|..-++++++=.
T Consensus 5 aWiLG~~lAc~f~ilna~w~ 24 (30)
T PRK14749 5 LWFVGILLMCSLSTLVLVWL 24 (30)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 47889999988888776544
No 112
>KOG0682 consensus Ammonia permease [Inorganic ion transport and metabolism]
Probab=23.71 E-value=4.7e+02 Score=27.34 Aligned_cols=96 Identities=14% Similarity=0.061 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHH--HHHHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCCh------------------
Q 018943 229 FTYSMLLLFFSTA--GFWMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDA------------------ 288 (348)
Q Consensus 229 ~~y~ll~~~~~~~--l~Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~------------------ 288 (348)
++|..+++.+++. ..-.+-|+.=|+.-|+.-+.|+=-+.=....+..|+.--++....+.
T Consensus 310 ~pWaAiviG~va~~~~~~~~kL~~~lkvDDpl~~f~~Hgv~G~wG~I~~glFa~~~v~~~~~~~~~~~~G~~~~~~~kqL 389 (500)
T KOG0682|consen 310 EPWAAIVIGAVAGLVCNAANKLKERLKVDDPLDAFAVHGVGGIWGLIFTGLFAHDDVAAMDGTTIARISGLWMGHGFKQL 389 (500)
T ss_pred CcHHHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHhccccchhhheeeeeccCccccccCCCccCCCceeecchHHHH
Confidence 4555555544332 23334467777788898888886666666666666555444322111
Q ss_pred -HHH--HHHHHHHHHHHHhhhhccCCCCCC-ccchhhhHH
Q 018943 289 -LRA--TMFILGTASVFIGISLLAPDESKG-ILMSSLLRS 324 (348)
Q Consensus 289 -~~~--~~~~~G~~vi~~GV~lLs~~~~~~-~~~~~~~~~ 324 (348)
+|+ +....+..+++.++.++.-++... -+++++.|+
T Consensus 390 g~Qla~i~ai~~ws~~~t~iilf~l~kip~~LRvs~e~E~ 429 (500)
T KOG0682|consen 390 GYQLAGILAIAAWSAVVTFIILFLLNKIPLGLRVSEEEEE 429 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccceeecCHHHHh
Confidence 122 344555556777777777666666 555555553
No 113
>KOG3491 consensus Predicted membrane protein [Function unknown]
Probab=22.51 E-value=2.1e+02 Score=20.98 Aligned_cols=20 Identities=25% Similarity=0.622 Sum_probs=14.0
Q ss_pred hhHHHHHHHH--HHHHHHHHHH
Q 018943 57 SWRVGILVFL--LGNCLNFISF 76 (348)
Q Consensus 57 ~w~~G~~~~~--~g~~~~~~al 76 (348)
.|++|++.++ .+.+++++-.
T Consensus 39 PwLlglFvFVVcGSa~FqIIr~ 60 (65)
T KOG3491|consen 39 PWLLGLFVFVVCGSALFQIIRT 60 (65)
T ss_pred hHHHHHHHHHhhcHHHHHHHHH
Confidence 5999998885 3556666544
No 114
>COG1279 Lysine efflux permease [General function prediction only]
Probab=22.50 E-value=2.3e+02 Score=25.97 Aligned_cols=70 Identities=19% Similarity=0.137 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHH-Hhhhhcc---ccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHH-HHHHhhhhc
Q 018943 236 LFFSTAGFWMAR-LNEGLSL---FDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTA-SVFIGISLL 308 (348)
Q Consensus 236 ~~~~~~l~Q~~~-Ln~aL~~---~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~-vi~~GV~lL 308 (348)
.++.-.-.|..| +|||+++ .+....+-+.-...+..++.+...+.+|. +....+....|.+ ++-.|...+
T Consensus 14 ~LI~pIGaQNaFVl~QGi~r~~~l~~~~~c~i~D~~Li~~gv~G~~~li~~~---p~l~~i~~~~G~~FLl~yg~~a~ 88 (202)
T COG1279 14 SLILPIGAQNAFVLNQGIRREYVLPIALLCAISDIVLISAGVFGVGALIAKS---PWLLLIVRWGGAAFLLYYGLLAL 88 (202)
T ss_pred HHHHhccchhHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555678777 6999987 22233333444555667777777777775 2344555555544 444554443
No 115
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=22.39 E-value=5.6e+02 Score=22.83 Aligned_cols=56 Identities=14% Similarity=0.084 Sum_probs=37.6
Q ss_pred HHHHHhhhhccccccchhhhHHHHHHHHHHHhhhhhccccccCChHHHHHHHHHHHHHHHhhh
Q 018943 244 WMARLNEGLSLFDAILIVPMFQIAWTSFSICTGFVYFQEYQVFDALRATMFILGTASVFIGIS 306 (348)
Q Consensus 244 Q~~~Ln~aL~~~d~~~vvP~~~v~~~~~si~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~ 306 (348)
|-.+.+..++++|++ ..-+....-...+.+.+..+|+|.. +.. ...|..+++.|++
T Consensus 165 ~~~~v~~vlk~~~~~-~~~~~~~~~~~~s~lls~~~f~~~l--s~~----~~~g~~lV~~~~~ 220 (222)
T TIGR00803 165 GGLCIGGVVRYADNT-TKSFVTALSIILSTLASVRLFDAKI--SST----FYLGAILVFLATF 220 (222)
T ss_pred cCceeeehhHHhHHH-HHHHHHHHHHHHHHHHHHHHhcCCc--cHH----HHHHHHHHHeeeE
Confidence 334467777888877 5666677777888888899999753 333 3356666666654
No 116
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=22.01 E-value=4.8e+02 Score=23.44 Aligned_cols=55 Identities=16% Similarity=0.146 Sum_probs=29.0
Q ss_pred chhHHHHHHHHHHHHHHHHH---HhhhhhH---HHhhhhhhHHHHHHHHHHHHhccccchh
Q 018943 56 HSWRVGILVFLLGNCLNFIS---FGYAAQS---LLAALGSVQFVSNIAFSYFVFNKMVTVK 110 (348)
Q Consensus 56 p~w~~G~~~~~~g~~~~~~a---l~~~p~s---lv~Pl~~~~lv~~~~~s~~~l~e~~~~~ 110 (348)
+.||-.++..++..+.++.. .++.|.. .+.|...+-+-...+..+++++.|.+.+
T Consensus 144 ~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~~i~ 204 (206)
T PF06570_consen 144 PSWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYLKKKYNIT 204 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45666666555555555433 3334443 2334334433345566677888776543
No 117
>PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like. The function is not known.
Probab=21.86 E-value=1.4e+02 Score=24.20 Aligned_cols=32 Identities=19% Similarity=0.075 Sum_probs=16.9
Q ss_pred hhccccccCChHHHHHHHHHHHHHHHhhhhcc
Q 018943 278 VYFQEYQVFDALRATMFILGTASVFIGISLLA 309 (348)
Q Consensus 278 i~f~E~~~~~~~~~~~~~~G~~vi~~GV~lLs 309 (348)
..+.|....++|.....+.++.+++.++..+.
T Consensus 61 ~~l~~~~~~~~~~a~liv~~~~l~la~i~~~~ 92 (121)
T PF07332_consen 61 FALWEALGLPPWLAFLIVAGLYLLLALILLLI 92 (121)
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444456655555666665555555543
No 118
>COG3817 Predicted membrane protein [Function unknown]
Probab=20.72 E-value=1.4e+02 Score=28.58 Aligned_cols=44 Identities=23% Similarity=0.425 Sum_probs=25.3
Q ss_pred HHhhhhhccccccCChHHHHHHHHHHHHHHHhhh--hccCCCCCCc
Q 018943 273 ICTGFVYFQEYQVFDALRATMFILGTASVFIGIS--LLAPDESKGI 316 (348)
Q Consensus 273 i~~G~i~f~E~~~~~~~~~~~~~~G~~vi~~GV~--lLs~~~~~~~ 316 (348)
.+-|...|.|+.-+++.+...+.+|+..++.-+. .+.+++|+..
T Consensus 108 tlig~~lf~~~s~~~pknatl~al~i~~i~a~vla~~mt~~~p~~~ 153 (313)
T COG3817 108 TLIGSLLFPDLSFFDPKNATLMALGIAAIVATVLACVMTKQTPKAA 153 (313)
T ss_pred HHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHHhccChhhH
Confidence 3456677788777777766555555554444443 3445555443
Done!