Citrus Sinensis ID: 018947
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 348 | 2.2.26 [Sep-21-2011] | |||||||
| O23969 | 352 | Pollen-specific protein S | N/A | no | 0.985 | 0.974 | 0.660 | 1e-132 | |
| Q3SYX0 | 384 | Protein NDRG1 OS=Bos taur | yes | no | 0.801 | 0.726 | 0.304 | 2e-33 | |
| Q641F2 | 396 | Protein NDRG1-A OS=Xenopu | N/A | no | 0.798 | 0.702 | 0.313 | 1e-32 | |
| A5A6K6 | 357 | Protein NDRG2 OS=Pan trog | no | no | 0.787 | 0.767 | 0.302 | 5e-32 | |
| A7MB28 | 375 | Protein NDRG3 OS=Bos taur | no | no | 0.798 | 0.741 | 0.294 | 6e-32 | |
| Q62433 | 394 | Protein NDRG1 OS=Mus musc | yes | no | 0.798 | 0.705 | 0.306 | 7e-32 | |
| Q5RA95 | 375 | Protein NDRG3 OS=Pongo ab | yes | no | 0.798 | 0.741 | 0.290 | 9e-32 | |
| Q9UGV2 | 375 | Protein NDRG3 OS=Homo sap | yes | no | 0.787 | 0.730 | 0.294 | 1e-31 | |
| Q5RBN6 | 371 | Protein NDRG2 OS=Pongo ab | no | no | 0.778 | 0.730 | 0.302 | 1e-31 | |
| Q6JE36 | 394 | Protein NDRG1 OS=Rattus n | yes | no | 0.798 | 0.705 | 0.306 | 1e-31 |
| >sp|O23969|SF21_HELAN Pollen-specific protein SF21 OS=Helianthus annuus GN=SF21 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/345 (66%), Positives = 276/345 (80%), Gaps = 2/345 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADS S+S+ + GK+++I+T GS+SVT+ GDQ+KP L+TYPDLALN+MSCFQ
Sbjct: 1 MADSG-HSISVTFPSFHSGGKEHIIRTGCGSVSVTVCGDQEKPPLITYPDLALNHMSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLF PE+ SLLLHNFCIYHINPPGHE GAA+I D+PV S++DL DQI VLN+F LG+
Sbjct: 60 GLFVSPESASLLLHNFCIYHINPPGHELGAASIGIDDPVPSIEDLCDQILVVLNYFRLGS 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMG AGAYILTLF++KY RV GLIL+SP+CKAPSWTE YNK+ S LYYYGMC +
Sbjct: 120 VMCMGAMAGAYILTLFSIKYSERVTGLILISPICKAPSWTERFYNKLTSKTLYYYGMCDL 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKELL+ RYFSKEV GN ++PESD+V ACR+LLDER S NVW +L+AI+ R DI+E L+
Sbjct: 180 VKELLIHRYFSKEVCGNPEIPESDMVLACRKLLDERDSVNVWRYLQAIDSRRDITEELKS 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300
L+C+++IFVG+SSPFH EA+ + K+ SALVEV ACGSMVT+EQPHAMLIP+E FL
Sbjct: 240 LECKTIIFVGDSSPFHDEALQIAEKLGTNCSALVEVHACGSMVTQEQPHAMLIPLENFLK 299
Query: 301 GYGLYRP-TLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 344
G+GLYRP S SPRSPL P I PELL PE MGLKL+PIK R+S
Sbjct: 300 GFGLYRPCRYSNSPRSPLGPSSIDPELLYPEKMGLKLRPIKLRVS 344
|
Helianthus annuus (taxid: 4232) |
| >sp|Q3SYX0|NDRG1_BOVIN Protein NDRG1 OS=Bos taurus GN=NDRG1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 155/302 (51%), Gaps = 23/302 (7%)
Query: 21 KDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
++ I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F +
Sbjct: 33 QEQDIETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAV 91
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+
Sbjct: 92 CHVDAPGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFAL 151
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 198
V GL+L++ A W +W +K+ G + ++++ F KE N
Sbjct: 152 NNPEMVEGLVLINVNPCAEGWMDWAASKI-------SGWTQALPDMVVSHLFGKEEMQN- 203
Query: 199 QVPESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFVG 250
++V A R ++++ N+ F+ A NGR D+ LQC +L+ VG
Sbjct: 204 ---NVEVVHAYRHHVMNDMNPGNLQLFINAYNGRRDLEIERPMPGAHTVTLQCPALLVVG 260
Query: 251 ESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLS 310
+SSP V SK+D + L+++ CG + QP + +YF+ G G Y P+ S
Sbjct: 261 DSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSAS 319
Query: 311 VS 312
++
Sbjct: 320 MT 321
|
Stress-responsive protein involved in hormone responses, cell growth, and differentiation. Acts as a tumor suppressor in many cell types. Necessary but not sufficient for p53/TP53-mediated caspase activation and apoptosis. Has a role in cell trafficking notably of the Schwann cell and is necessary for the maintenance and development of the peripheral nerve myelin sheath. Required for vesicular recycling of CDH1 and TF. May also function in lipid trafficking. Protects cells from spindle disruption damage. Functions in p53/TP53-dependent mitotic spindle checkpoint. Regulates microtubule dynamics and maintains euploidy. Bos taurus (taxid: 9913) |
| >sp|Q641F2|NDR1A_XENLA Protein NDRG1-A OS=Xenopus laevis GN=ndrg1-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 25/303 (8%)
Query: 21 KDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
+++ I+T+HG + VT+ G ++P ++TY D+ LN+ +CF LF + + H F +
Sbjct: 34 QEHDIETAHGIVHVTMCGTPKLNRPVILTYHDIGLNHKTCFNSLFNFEDMHEISQH-FSV 92
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GAA+ S+D LA+ + V+ GL VM +G+ AGAYILT FA+
Sbjct: 93 CHVDAPGQQEGAASFPAGYMYPSMDQLAEMLPGVVQQLGLRTVMGLGIGAGAYILTRFAL 152
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGN 197
+ V GL+L++ A W +W K+ G + ++++ FSK EV N
Sbjct: 153 NHPSMVEGLVLININPCAEGWMDWAATKI-------SGWTNALPDMVISHLFSKDEVHSN 205
Query: 198 AQVPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFV 249
PE +V+ R+ +L + +NV HF+++ N R D+ L+C +L+ V
Sbjct: 206 ---PE--LVETYRQHILHDINQNNVQHFVKSYNSRRDLEIERPIPGTNAVTLKCPALLVV 260
Query: 250 GESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTL 309
G+SSP V SK+D + L+++ CG QP + +YF+ G G Y P
Sbjct: 261 GDSSPAVDAVVECNSKLDPTKTTLLKMSDCGGFPQVIQPAKLAEAFKYFVQGMG-YMPAA 319
Query: 310 SVS 312
S++
Sbjct: 320 SMT 322
|
May be involved in pronephros development, after specification of the pronephros. Xenopus laevis (taxid: 8355) |
| >sp|A5A6K6|NDRG2_PANTR Protein NDRG2 OS=Pan troglodytes GN=NDRG2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 149/294 (50%), Gaps = 20/294 (6%)
Query: 17 PPSGKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH 74
P + K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++
Sbjct: 21 PEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQ 79
Query: 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134
NF H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL
Sbjct: 80 NFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILA 139
Query: 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-E 193
+A+ + V GL+L++ A W +W +K+ G+ + E++L FS+ E
Sbjct: 140 RYALNHPDTVEGLVLINIDPNAKRWMDWAAHKLT-------GLTSSIPEMILGHLFSQEE 192
Query: 194 VRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFV 249
+ GN S+++Q R ++ + N+ + + N R D++ G L+C ++ V
Sbjct: 193 LSGN-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLKCPVMLVV 247
Query: 250 GESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303
G+ +P V SK+D ++ +++ G QP + +YFL G G
Sbjct: 248 GDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMG 301
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Pan troglodytes (taxid: 9598) |
| >sp|A7MB28|NDRG3_BOVIN Protein NDRG3 OS=Bos taurus GN=NDRG3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 160/306 (52%), Gaps = 28/306 (9%)
Query: 21 KDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
+++ I+T+HG + VTI G ++P ++TY D+ LN+ SCF FF E + +F +
Sbjct: 31 QEHDIETAHGMVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNA-FFNFEDMQEITQHFAV 89
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GA + ++D+LA+ + VL H L +++ +GV AGAYIL+ FA+
Sbjct: 90 CHVDAPGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLNLKSIIGIGVGAGAYILSRFAL 149
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGN 197
+ V GL+L++ A W +W +K+ G+ V +++L +F + E++ N
Sbjct: 150 NHPELVEGLVLINVDPCAKGWIDWAASKL-------SGLTTNVVDIILSHHFGQEELQAN 202
Query: 198 AQVPESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI----------SEGLRKLQCRSL 246
D++Q R + + N+ FL + NGR D+ + L+C +L
Sbjct: 203 L-----DLIQTYRLHIAQDINQENLQLFLGSYNGRKDLEIERPILGQNDNKSKTLKCSTL 257
Query: 247 IFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYR 306
+ VG+SSP V S+++ + L+++ CG + QP + +YFL G G Y
Sbjct: 258 LVVGDSSPAVEAVVECNSRLNPVNTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMG-YI 316
Query: 307 PTLSVS 312
P+ S++
Sbjct: 317 PSASMT 322
|
Bos taurus (taxid: 9913) |
| >sp|Q62433|NDRG1_MOUSE Protein NDRG1 OS=Mus musculus GN=Ndrg1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 156/303 (51%), Gaps = 25/303 (8%)
Query: 21 KDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
++ I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F +
Sbjct: 33 QEQDIETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAV 91
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+
Sbjct: 92 CHVDAPGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHQFGLKSVIGMGTGAGAYILTRFAL 151
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGN 197
V GL+L++ A W +W +K+ G + ++++ F K E+ N
Sbjct: 152 NNPEMVEGLVLMNVNPCAEGWMDWAASKI-------SGWTQALPDMVVSHLFGKEEIHNN 204
Query: 198 AQVPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFV 249
+V V R+ +L++ SN+ F+ A N R D+ LQC +L+ V
Sbjct: 205 VEV-----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVV 259
Query: 250 GESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTL 309
G++SP V SK+D + L+++ CG + QP + +YF+ G G Y P+
Sbjct: 260 GDNSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSA 318
Query: 310 SVS 312
S++
Sbjct: 319 SMT 321
|
Stress-responsive protein involved in hormone responses, cell growth, and differentiation. Acts as a tumor suppressor in many cell types. Necessary but not sufficient for p53/TP53-mediated caspase activation and apoptosis. Required for vesicular recycling of CDH1 and TF. May also function in lipid trafficking. Protects cells from spindle disruption damage. Functions in p53/TP53-dependent mitotic spindle checkpoint. Regulates microtubule dynamics and maintains euploidy (By similarity). Has a role in cell trafficking notably of the Schwann cell and is necessary for the maintenance and development of the peripheral nerve myelin sheath. Mus musculus (taxid: 10090) |
| >sp|Q5RA95|NDRG3_PONAB Protein NDRG3 OS=Pongo abelii GN=NDRG3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 160/306 (52%), Gaps = 28/306 (9%)
Query: 21 KDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
+++ I+T+HG + VTI G ++P ++TY D+ LN+ SCF FF E + +F +
Sbjct: 31 QEHDIETTHGMVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNA-FFNFEDMQEITQHFAV 89
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GA + ++D+LA+ + VL H L +++ +GV AGAYIL+ FA+
Sbjct: 90 CHVDAPGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFAL 149
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGN 197
+ V GL+L++ A W +W +K+ G+ V +++L +F + E++ N
Sbjct: 150 NHPELVEGLVLINVDPCAKGWIDWAASKL-------SGLTTNVVDIILAHHFGQEELQAN 202
Query: 198 AQVPESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI----------SEGLRKLQCRSL 246
D++Q R + + N+ FL + NGR D+ + L+C +L
Sbjct: 203 P-----DLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTLKCSTL 257
Query: 247 IFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYR 306
+ VG++SP V S+++ + L+++ CG + QP + +YFL G G Y
Sbjct: 258 LVVGDNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMG-YI 316
Query: 307 PTLSVS 312
P+ S++
Sbjct: 317 PSASMT 322
|
Pongo abelii (taxid: 9601) |
| >sp|Q9UGV2|NDRG3_HUMAN Protein NDRG3 OS=Homo sapiens GN=NDRG3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 157/302 (51%), Gaps = 28/302 (9%)
Query: 25 IKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T+HG + VTI G ++P ++TY D+ LN+ SCF FF E + +F + H++
Sbjct: 35 IETTHGVVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNA-FFNFEDMQEITQHFAVCHVD 93
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + ++D+LA+ + VL H L +++ +GV AGAYIL+ FA+ +
Sbjct: 94 APGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPE 153
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVP 201
V GL+L++ A W +W +K+ G+ V +++L +F + E++ N
Sbjct: 154 LVEGLVLINVDPCAKGWIDWAASKL-------SGLTTNVVDIILAHHFGQEELQANL--- 203
Query: 202 ESDIVQACR-RLLDERQSSNVWHFLEAINGRPDI----------SEGLRKLQCRSLIFVG 250
D++Q R + + N+ FL + NGR D+ + L+C +L+ VG
Sbjct: 204 --DLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTLKCSTLLVVG 261
Query: 251 ESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLS 310
++SP V S+++ + L+++ CG + QP + +YFL G G Y P+ S
Sbjct: 262 DNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMG-YIPSAS 320
Query: 311 VS 312
++
Sbjct: 321 MT 322
|
Homo sapiens (taxid: 9606) |
| >sp|Q5RBN6|NDRG2_PONAB Protein NDRG2 OS=Pongo abelii GN=NDRG2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 20/291 (6%)
Query: 20 GKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC 77
G+ + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++ NF
Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQNFV 96
Query: 78 IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFA 137
H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL +A
Sbjct: 97 RVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYA 156
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRG 196
+ + V GL+L++ A W +W +K+ G+ + E++L FS+ E+ G
Sbjct: 157 LNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSG 209
Query: 197 NAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDIS---EGLRKLQCRSLIFVGES 252
N S+++Q R ++ + N+ + + N R D++ G L+C ++ VG+
Sbjct: 210 N-----SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLKCPVMLVVGDQ 264
Query: 253 SPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303
+P V SK+D ++ +++ G QP + +YFL G G
Sbjct: 265 APHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMG 315
|
Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation. Pongo abelii (taxid: 9601) |
| >sp|Q6JE36|NDRG1_RAT Protein NDRG1 OS=Rattus norvegicus GN=Ndrg1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 156/303 (51%), Gaps = 25/303 (8%)
Query: 21 KDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCI 78
++ I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F +
Sbjct: 33 QEQDIETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAV 91
Query: 79 YHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138
H++ PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+
Sbjct: 92 CHVDAPGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHKFGLKSVIGMGTGAGAYILTRFAL 151
Query: 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGN 197
V GL+L++ A W +W +K+ G + ++++ F K E+ N
Sbjct: 152 NNPEMVEGLVLMNVNPCAEGWMDWAASKI-------SGWTQALPDMVVSHLFGKEEIHSN 204
Query: 198 AQVPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDI-------SEGLRKLQCRSLIFV 249
+V V R+ +L++ SN+ F+ A N R D+ LQC +L+ V
Sbjct: 205 VEV-----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVV 259
Query: 250 GESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTL 309
G++SP V SK+D + L+++ CG + QP + +YF+ G G Y P+
Sbjct: 260 GDNSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSA 318
Query: 310 SVS 312
S++
Sbjct: 319 SMT 321
|
Stress-responsive protein involved in hormone responses, cell growth, and differentiation. Acts as a tumor suppressor in many cell types. Necessary but not sufficient for p53/TP53-mediated caspase activation and apoptosis. Has a role in cell trafficking notably of the Schwann cell and is necessary for the maintenance and development of the peripheral nerve myelin sheath. Required for vesicular recycling of CDH1 and TF. May also function in lipid trafficking. Protects cells from spindle disruption damage. Functions in p53/TP53-dependent mitotic spindle checkpoint. Regulates microtubule dynamics and maintains euploidy. Rattus norvegicus (taxid: 10116) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 348 | ||||||
| 225429470 | 344 | PREDICTED: pollen-specific protein SF21 | 0.985 | 0.997 | 0.866 | 1e-174 | |
| 255550824 | 347 | pollen specific protein sf21, putative [ | 0.982 | 0.985 | 0.860 | 1e-173 | |
| 224092204 | 347 | predicted protein [Populus trichocarpa] | 0.977 | 0.979 | 0.853 | 1e-170 | |
| 356564069 | 347 | PREDICTED: pollen-specific protein SF21- | 0.985 | 0.988 | 0.834 | 1e-169 | |
| 359807335 | 344 | uncharacterized protein LOC100804729 [Gl | 0.982 | 0.994 | 0.833 | 1e-169 | |
| 357437503 | 349 | Pollen-specific protein SF21 [Medicago t | 0.997 | 0.994 | 0.816 | 1e-167 | |
| 356564067 | 349 | PREDICTED: pollen-specific protein SF21- | 0.948 | 0.945 | 0.854 | 1e-167 | |
| 356506957 | 344 | PREDICTED: pollen-specific protein SF21- | 0.982 | 0.994 | 0.830 | 1e-167 | |
| 224141627 | 347 | predicted protein [Populus trichocarpa] | 0.985 | 0.988 | 0.837 | 1e-166 | |
| 449450343 | 347 | PREDICTED: pollen-specific protein SF21- | 0.977 | 0.979 | 0.832 | 1e-166 |
| >gi|225429470|ref|XP_002277611.1| PREDICTED: pollen-specific protein SF21 [Vitis vinifera] gi|296081622|emb|CBI20627.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 299/345 (86%), Positives = 325/345 (94%), Gaps = 2/345 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADSS DSVSIDMET GK++L+KTS GS+SV+++GD DKPALVTYPDLALN++SCFQ
Sbjct: 1 MADSS-DSVSIDMETISLGGKEHLVKTSKGSVSVSVFGDPDKPALVTYPDLALNHLSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLFFCPEA SLLLHNFCIYHI+PPGHE GA A+S DEP LS DDLADQIAEVLN FGLGA
Sbjct: 60 GLFFCPEAFSLLLHNFCIYHISPPGHELGADAVSLDEPALSADDLADQIAEVLNFFGLGA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFA+KYRH V+GLIL+SPLCKAPSWTEWLYNKVM N+LYYYGMCGV
Sbjct: 120 VMCMGVTAGAYILTLFAIKYRHHVVGLILISPLCKAPSWTEWLYNKVMLNVLYYYGMCGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKELLLKRYFSKEVRG+AQVPESDIVQACRRLLDERQSSNV FLEAINGRPDI+EGLRK
Sbjct: 180 VKELLLKRYFSKEVRGSAQVPESDIVQACRRLLDERQSSNVLKFLEAINGRPDITEGLRK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300
LQCRSL+FVG++SPFHSEA+HMTSK+DRRYSALVEVQ+CGSMVTEEQPHAMLIPMEYFLM
Sbjct: 240 LQCRSLLFVGDNSPFHSEALHMTSKLDRRYSALVEVQSCGSMVTEEQPHAMLIPMEYFLM 299
Query: 301 GYGLYRP-TLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 344
GYGLYRP T+S+SPRSPLSP CI+PELLSPESMGLKLKPIKTRIS
Sbjct: 300 GYGLYRPSTVSLSPRSPLSPSCIAPELLSPESMGLKLKPIKTRIS 344
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255550824|ref|XP_002516460.1| pollen specific protein sf21, putative [Ricinus communis] gi|223544280|gb|EEF45801.1| pollen specific protein sf21, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 296/344 (86%), Positives = 322/344 (93%), Gaps = 2/344 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADSS DSVSIDMET +GK+ L+KT HG +SV++YGDQDKPAL+TYPDLALN+MSCFQ
Sbjct: 1 MADSS-DSVSIDMETLSLAGKEFLVKTCHGCVSVSVYGDQDKPALITYPDLALNHMSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLFFCPEACSLLL+NFCIYHI+PPGHE GAA +S D+ VLSVDDLADQIA++LN+FGLGA
Sbjct: 60 GLFFCPEACSLLLYNFCIYHISPPGHELGAATVSPDDNVLSVDDLADQIADILNYFGLGA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMKYR RVLGLIL+SPLC+ PSWTEWL NKV+SNLLYYYG+CGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKYRQRVLGLILISPLCQEPSWTEWLCNKVISNLLYYYGICGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKE LLKRYFSKE RG+AQVPESDIVQACRRLLDERQS NVW FLEA+NGRPDISEGLRK
Sbjct: 180 VKEFLLKRYFSKEARGSAQVPESDIVQACRRLLDERQSLNVWRFLEALNGRPDISEGLRK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300
L CRSLIFVGE+SPFHSEA+HMTSK+DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM
Sbjct: 240 LHCRSLIFVGENSPFHSEALHMTSKLDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 299
Query: 301 GYGLYR-PTLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRI 343
GYG+YR P LSVSPRSPLSP CISPELLSPESMGLKLKPI+TRI
Sbjct: 300 GYGMYRPPKLSVSPRSPLSPLCISPELLSPESMGLKLKPIRTRI 343
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092204|ref|XP_002309507.1| predicted protein [Populus trichocarpa] gi|222855483|gb|EEE93030.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 291/341 (85%), Positives = 317/341 (92%), Gaps = 1/341 (0%)
Query: 5 SSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF 64
SSDSVSIDMETP SGK+ +++T G +SV++YGDQDKPALVTYPDLALN++SCFQGLFF
Sbjct: 4 SSDSVSIDMETPSLSGKEYVVETCCGYVSVSVYGDQDKPALVTYPDLALNHISCFQGLFF 63
Query: 65 CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124
CPEACSLLLHNFCIYHI+PPGHE GAA IS D+P+LSVDDLADQIA+VLN+FGL AVMCM
Sbjct: 64 CPEACSLLLHNFCIYHISPPGHELGAATISPDDPLLSVDDLADQIADVLNYFGLDAVMCM 123
Query: 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184
GVTAGAYILTLFAMKYR RVLGLIL+SPLC APSWTEWLYNKV+SNLLYYYGMCGVVKEL
Sbjct: 124 GVTAGAYILTLFAMKYRQRVLGLILISPLCNAPSWTEWLYNKVLSNLLYYYGMCGVVKEL 183
Query: 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244
LLKRYFSKE RG+AQVPESD+VQACRRLLDERQ NVW FLEA+NGR DIS+GLRKL+CR
Sbjct: 184 LLKRYFSKEARGSAQVPESDVVQACRRLLDERQGLNVWRFLEAMNGRQDISDGLRKLRCR 243
Query: 245 SLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 304
SLI+VGESSPFH EA+ M SK+DRR SALVEVQACGSMVTEEQPHAMLIP+EYFLMGYG+
Sbjct: 244 SLIYVGESSPFHFEALDMNSKLDRRCSALVEVQACGSMVTEEQPHAMLIPLEYFLMGYGM 303
Query: 305 YR-PTLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 344
YR P LSVSPRSPLSP CISPELLSPESMGLKLKPIKTRIS
Sbjct: 304 YRPPKLSVSPRSPLSPICISPELLSPESMGLKLKPIKTRIS 344
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564069|ref|XP_003550279.1| PREDICTED: pollen-specific protein SF21-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/344 (83%), Positives = 315/344 (91%), Gaps = 1/344 (0%)
Query: 5 SSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF 64
+ DS+S+D+++ PS ++++I+T HGS+SV +YGDQDKPAL+TYPDLALNY+SCFQGL F
Sbjct: 4 AHDSLSLDIDSFSPSPQEHIIRTRHGSVSVAVYGDQDKPALITYPDLALNYVSCFQGLLF 63
Query: 65 CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124
CPEA LLLHNFCIYHI+PPGHE GAAAI D P+LSVDDLADQIAEVLN FGL AVMCM
Sbjct: 64 CPEAYYLLLHNFCIYHISPPGHELGAAAIDQDHPILSVDDLADQIAEVLNFFGLSAVMCM 123
Query: 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184
GVTAGAYILTLFAMKYR RVLGLILVSPLCK PSWTEWLYNKVMSNLLY+YGMCGVVKE+
Sbjct: 124 GVTAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWTEWLYNKVMSNLLYFYGMCGVVKEI 183
Query: 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244
LLKRYFSKE+RG Q+PESDIV++CRRLLDERQS NVW FLEAIN RPDISEGLRKL CR
Sbjct: 184 LLKRYFSKEIRGGTQLPESDIVKSCRRLLDERQSLNVWRFLEAINERPDISEGLRKLHCR 243
Query: 245 SLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 304
SLIFVG+ SPFHSEAVHMTSK+DRR+SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL
Sbjct: 244 SLIFVGDMSPFHSEAVHMTSKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 303
Query: 305 YRPT-LSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISAGI 347
Y+P+ LSVSPRSPLSP CISPEL SPESMGLKLKPIKTRIS I
Sbjct: 304 YKPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISLEI 347
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359807335|ref|NP_001240866.1| uncharacterized protein LOC100804729 [Glycine max] gi|255634903|gb|ACU17810.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust.
Identities = 286/343 (83%), Positives = 313/343 (91%), Gaps = 1/343 (0%)
Query: 6 SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC 65
+DSVS+DME P ++++I+T HG +SV +YGDQDKPAL+TYPDLALNY+SCFQGL FC
Sbjct: 2 ADSVSVDMEAISPPPEEHIIRTRHGRVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFC 61
Query: 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMG 125
PEACSLLLHNFCIYHI+PPGHE GAAAI D+P+LS DDLADQIAEVLN+FG VMCMG
Sbjct: 62 PEACSLLLHNFCIYHISPPGHELGAAAIDPDDPILSADDLADQIAEVLNYFGHSTVMCMG 121
Query: 126 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185
VTAGAYILTLFAMKYRHRVLGL+LVSPLCKAPSWTEWLYNKVMSNLLY+YGMCGVVKE+L
Sbjct: 122 VTAGAYILTLFAMKYRHRVLGLVLVSPLCKAPSWTEWLYNKVMSNLLYFYGMCGVVKEIL 181
Query: 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245
LKRYFSKEVRG+ + ESD+VQAC+R LDERQS NVW FLEAINGR DISEGLRKLQCRS
Sbjct: 182 LKRYFSKEVRGSDYLSESDVVQACQRSLDERQSLNVWRFLEAINGRYDISEGLRKLQCRS 241
Query: 246 LIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 305
LIFVG+ SPFH+EA+HMTSK+DRR SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY
Sbjct: 242 LIFVGDMSPFHAEALHMTSKLDRRLSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 301
Query: 306 RPT-LSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISAGI 347
RP+ LSVSPRSPLSP CISPEL SPESMGLKLKPIKTRIS I
Sbjct: 302 RPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISVEI 344
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357437503|ref|XP_003589027.1| Pollen-specific protein SF21 [Medicago truncatula] gi|355478075|gb|AES59278.1| Pollen-specific protein SF21 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/349 (81%), Positives = 315/349 (90%), Gaps = 2/349 (0%)
Query: 1 MADSS-SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCF 59
MADS+ +DSVS+D+++ PS K+++I+T HGS+SV +YGDQDKPAL+TYPDL LNY+SCF
Sbjct: 1 MADSTPTDSVSVDIDSISPSPKEHIIRTCHGSVSVAVYGDQDKPALITYPDLGLNYVSCF 60
Query: 60 QGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119
QGL FCPEA LLLHNFCIYHI+PPGHE GAAAI D PVLSVDDLADQIAEVLN FGL
Sbjct: 61 QGLLFCPEAYYLLLHNFCIYHISPPGHELGAAAIDPDYPVLSVDDLADQIAEVLNFFGLN 120
Query: 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179
AVMCMGVTAGAYILTLFAMKYR RVLGLILVSPLCK PSW+EWLYNKVMSNLLY+YGMCG
Sbjct: 121 AVMCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWSEWLYNKVMSNLLYFYGMCG 180
Query: 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 239
VVKE+LLKRYFSKE+RG Q PESDIV+ACRR LDERQS NVW FLEAINGRPD+SEGLR
Sbjct: 181 VVKEILLKRYFSKEIRGGTQFPESDIVKACRRSLDERQSLNVWRFLEAINGRPDLSEGLR 240
Query: 240 KLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 299
L CRSLIFVG+ SP+HSE++H+T K+DRR+SALVEVQACGSMVTEEQPHAMLIPMEYFL
Sbjct: 241 NLHCRSLIFVGDMSPYHSESLHITKKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFL 300
Query: 300 MGYGLYRPTL-SVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISAGI 347
MGYGLYRP+ SVSPRSPLSP CISPEL SPESMGLKLKPIKTRI+ I
Sbjct: 301 MGYGLYRPSRKSVSPRSPLSPSCISPELFSPESMGLKLKPIKTRITGEI 349
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564067|ref|XP_003550278.1| PREDICTED: pollen-specific protein SF21-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/331 (85%), Positives = 305/331 (92%), Gaps = 1/331 (0%)
Query: 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC 77
PS ++++I+T HGS+SV +YGDQDKPAL+TYPDLALNY+SCFQGL FCPEA LLLHNFC
Sbjct: 19 PSPQEHIIRTRHGSVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFCPEAYYLLLHNFC 78
Query: 78 IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFA 137
IYHI+PPGHE GAAAI D P+LSVDDLADQIAEVLN FGL AVMCMGVTAGAYILTLFA
Sbjct: 79 IYHISPPGHELGAAAIDQDHPILSVDDLADQIAEVLNFFGLSAVMCMGVTAGAYILTLFA 138
Query: 138 MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197
MKYR RVLGLILVSPLCK PSWTEWLYNKVMSNLLY+YGMCGVVKE+LLKRYFSKE+RG
Sbjct: 139 MKYRQRVLGLILVSPLCKEPSWTEWLYNKVMSNLLYFYGMCGVVKEILLKRYFSKEIRGG 198
Query: 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS 257
Q+PESDIV++CRRLLDERQS NVW FLEAIN RPDISEGLRKL CRSLIFVG+ SPFHS
Sbjct: 199 TQLPESDIVKSCRRLLDERQSLNVWRFLEAINERPDISEGLRKLHCRSLIFVGDMSPFHS 258
Query: 258 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPT-LSVSPRSP 316
EAVHMTSK+DRR+SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY+P+ LSVSPRSP
Sbjct: 259 EAVHMTSKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYKPSKLSVSPRSP 318
Query: 317 LSPCCISPELLSPESMGLKLKPIKTRISAGI 347
LSP CISPEL SPESMGLKLKPIKTRIS I
Sbjct: 319 LSPSCISPELYSPESMGLKLKPIKTRISLEI 349
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356506957|ref|XP_003522239.1| PREDICTED: pollen-specific protein SF21-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/343 (83%), Positives = 311/343 (90%), Gaps = 1/343 (0%)
Query: 6 SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC 65
+DSVS+DME P ++++++T HG +SV +YGDQDKPAL+TYPDLALNY+SCFQGL FC
Sbjct: 2 ADSVSVDMEAISPPPEEHVVRTRHGCVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFC 61
Query: 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMG 125
PEACSLLLHNFCIYHI+PPGHE GAAAI D+P+LS DDL DQIAEVLN+FG VMCMG
Sbjct: 62 PEACSLLLHNFCIYHISPPGHELGAAAIDPDDPILSADDLVDQIAEVLNYFGHSTVMCMG 121
Query: 126 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185
VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY+YGMCGVVKE+L
Sbjct: 122 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYFYGMCGVVKEIL 181
Query: 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245
LKRYFSKEVRG+ +PESDIVQAC+R LDERQS NVW FLEAINGR DISEGLRKL+CRS
Sbjct: 182 LKRYFSKEVRGSDYLPESDIVQACQRSLDERQSLNVWRFLEAINGRYDISEGLRKLECRS 241
Query: 246 LIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 305
LIFVG+ S FH EA+HMTSK+DRR SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY
Sbjct: 242 LIFVGDMSCFHGEALHMTSKLDRRLSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 301
Query: 306 RPT-LSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISAGI 347
RP+ LSVSPRSPLSP CISPEL SPESMGLKLKPIKTRIS I
Sbjct: 302 RPSKLSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISEEI 344
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141627|ref|XP_002324168.1| predicted protein [Populus trichocarpa] gi|222865602|gb|EEF02733.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 289/345 (83%), Positives = 313/345 (90%), Gaps = 2/345 (0%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
M DSS DS+SIDMETP SGK+ +I+T +G +SV++YGDQDKPALVTYPDLALN+ SCFQ
Sbjct: 1 MGDSS-DSLSIDMETPSLSGKEYVIETCYGHVSVSVYGDQDKPALVTYPDLALNHTSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GL FCPEACSLLLHNFCIYHI+PPGHE GAA IS D+P+LSVDDLADQIAEVLN+FGL A
Sbjct: 60 GLLFCPEACSLLLHNFCIYHISPPGHELGAATISPDDPLLSVDDLADQIAEVLNYFGLDA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMKYR RVLGLIL+SPLC APSWTEWLYNKV+SNLLYYYGMCGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKYRQRVLGLILISPLCNAPSWTEWLYNKVLSNLLYYYGMCGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKELLLKRYFSKE G++QVPESD VQAC+RLLDERQ NVW FLEAINGR DIS GLRK
Sbjct: 180 VKELLLKRYFSKEALGSSQVPESDAVQACKRLLDERQGLNVWRFLEAINGRQDISNGLRK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300
L C SLIFVGE+SPFH E++ MTS++DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL
Sbjct: 240 LLCCSLIFVGENSPFHFESLDMTSELDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLT 299
Query: 301 GYGLYR-PTLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 344
GYG+YR P LSVSPRS LSP CISPELLSPESMGLKLKPIKTRIS
Sbjct: 300 GYGMYRPPKLSVSPRSTLSPICISPELLSPESMGLKLKPIKTRIS 344
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449450343|ref|XP_004142922.1| PREDICTED: pollen-specific protein SF21-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 284/341 (83%), Positives = 311/341 (91%), Gaps = 1/341 (0%)
Query: 5 SSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFF 64
SSDSVS+DME+ GK+ L+KT +G +SVT+ GD DKPAL+TYPDLALN+M CFQGL F
Sbjct: 4 SSDSVSVDMESISCGGKEYLVKTCYGVVSVTVVGDLDKPALITYPDLALNHMFCFQGLMF 63
Query: 65 CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124
CPEACSLLLHNFCIYHI+PPGHE GAAAI D+PVLS DDLADQIAEVLN+FGL AVMCM
Sbjct: 64 CPEACSLLLHNFCIYHISPPGHELGAAAICPDDPVLSADDLADQIAEVLNYFGLSAVMCM 123
Query: 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184
GVTAGAYILTLFAMK+RHRV GLIL+SP+C AP WTEWLYNKVMSNLLY+YGMCGVVKEL
Sbjct: 124 GVTAGAYILTLFAMKHRHRVHGLILISPICTAPCWTEWLYNKVMSNLLYFYGMCGVVKEL 183
Query: 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244
LLKRYFSK+ RG +QVPESD+VQACRR LDERQSSNVW FLEA+NGRPDISEGLRKL+CR
Sbjct: 184 LLKRYFSKDARGCSQVPESDLVQACRRSLDERQSSNVWRFLEAMNGRPDISEGLRKLKCR 243
Query: 245 SLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 304
SLIFVG+ SPFHSEA HMT K+DRRYSALVEVQ+CGSMVTEEQP AMLIPMEYFLMGYG+
Sbjct: 244 SLIFVGDRSPFHSEAHHMTVKLDRRYSALVEVQSCGSMVTEEQPDAMLIPMEYFLMGYGM 303
Query: 305 YRPT-LSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 344
YRP+ SVSPRSPLSP CI+PELLSPESMGLKLKPIKTRIS
Sbjct: 304 YRPSHFSVSPRSPLSPSCIAPELLSPESMGLKLKPIKTRIS 344
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 348 | ||||||
| TAIR|locus:2181905 | 344 | NDL2 "AT5G11790" [Arabidopsis | 0.985 | 0.997 | 0.796 | 7.1e-148 | |
| TAIR|locus:2165101 | 346 | NDL1 "AT5G56750" [Arabidopsis | 0.988 | 0.994 | 0.771 | 4.6e-144 | |
| TAIR|locus:2050404 | 347 | NDL3 "AT2G19620" [Arabidopsis | 0.971 | 0.974 | 0.707 | 3.7e-135 | |
| UNIPROTKB|Q3SYX0 | 384 | NDRG1 "Protein NDRG1" [Bos tau | 0.790 | 0.716 | 0.312 | 2.2e-34 | |
| UNIPROTKB|Q641F2 | 396 | ndrg1-a "Protein NDRG1-A" [Xen | 0.787 | 0.691 | 0.321 | 2.2e-34 | |
| UNIPROTKB|F1MS38 | 384 | NDRG1 "Protein NDRG1" [Bos tau | 0.790 | 0.716 | 0.308 | 9.5e-34 | |
| UNIPROTKB|E1BYD4 | 402 | NDRG1 "Uncharacterized protein | 0.787 | 0.681 | 0.301 | 1.5e-33 | |
| MGI|MGI:1341799 | 394 | Ndrg1 "N-myc downstream regula | 0.781 | 0.690 | 0.322 | 2e-33 | |
| UNIPROTKB|E2RMB9 | 384 | NDRG1 "Uncharacterized protein | 0.790 | 0.716 | 0.305 | 2.5e-33 | |
| RGD|1307303 | 394 | Ndrg1 "N-myc downstream regula | 0.781 | 0.690 | 0.322 | 2.5e-33 |
| TAIR|locus:2181905 NDL2 "AT5G11790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 274/344 (79%), Positives = 305/344 (88%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
MADSS DSVSIDME G+++L++T++G + V + GD DKPAL+TYPD+ALNYM CFQ
Sbjct: 1 MADSS-DSVSIDMEALSLGGQEHLVETTYGPVCVAVCGDPDKPALITYPDIALNYMFCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GL FCPEA SLLLHNFCIYHI+P GHE GA IS D P+LS DDLADQI EVLN+FGLGA
Sbjct: 60 GLLFCPEASSLLLHNFCIYHISPLGHELGAPMISVDAPLLSADDLADQIVEVLNYFGLGA 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMKYR RVLGLILVSPLC+APSW+EWL NKVMSNLLYYYG CGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCQAPSWSEWLCNKVMSNLLYYYGTCGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKE+LLKRYFSKEVRGN VPESDIVQ CRRLL ERQS+NVW FLEAINGR D+SEGLRK
Sbjct: 180 VKEMLLKRYFSKEVRGNGHVPESDIVQECRRLLSERQSTNVWRFLEAINGRVDLSEGLRK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300
LQCR+LIF+GE+S +HSEAVHMT+K+DRRY ALVEVQ GS+V+EEQP AM+IPMEYFLM
Sbjct: 240 LQCRTLIFIGENSAYHSEAVHMTTKLDRRYGALVEVQGSGSLVSEEQPQAMIIPMEYFLM 299
Query: 301 GYGLYRPTLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRIS 344
GYGLYRPT SVSPRSPLSP ISPELLSPE+MGLKLKPIKTR++
Sbjct: 300 GYGLYRPTQSVSPRSPLSPTRISPELLSPENMGLKLKPIKTRLA 343
|
|
| TAIR|locus:2165101 NDL1 "AT5G56750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1408 (500.7 bits), Expect = 4.6e-144, P = 4.6e-144
Identities = 267/346 (77%), Positives = 303/346 (87%)
Query: 1 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ 60
M DS +VS+D+ T GK++ +KT+ G +SV +YGD++KPAL+TYPDLALN+MSCFQ
Sbjct: 1 MTDSYG-AVSVDVGTIYLGGKEHRVKTASGVVSVIVYGDREKPALITYPDLALNHMSCFQ 59
Query: 61 GLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120
GLFFCPEA SLLLHNFCIYHI+PPGHE GAA I ++ V S ++LADQI EVLN FGLG
Sbjct: 60 GLFFCPEAASLLLHNFCIYHISPPGHELGAAPICPNDSVPSAENLADQILEVLNFFGLGV 119
Query: 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180
VMCMGVTAGAYILTLFAMK+R RVLGLILVSPLCKAPSW+EW YNKV++NLLYYYGMCGV
Sbjct: 120 VMCMGVTAGAYILTLFAMKHRERVLGLILVSPLCKAPSWSEWFYNKVITNLLYYYGMCGV 179
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
VKE LL+RYFSKEVRGN ++PESDI QACRRLLDERQ NV FL+AI+ RPDIS GL+K
Sbjct: 180 VKEFLLQRYFSKEVRGNVEIPESDIAQACRRLLDERQGINVLRFLDAIDRRPDISSGLKK 239
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300
L+CR+LIF+G+ SPF+SEAVHM + +DR Y ALVEVQACGSMVTEEQPHAMLIPMEYFLM
Sbjct: 240 LKCRTLIFIGDQSPFYSEAVHMAATLDRGYCALVEVQACGSMVTEEQPHAMLIPMEYFLM 299
Query: 301 GYGLYRPTL-SVSPRSPLSPCCISPELLSPESMGLKLKPIKTRISA 345
GYGLYRP+L S SPRSPLSP CISPELLSPESMGLKLKPIKTRISA
Sbjct: 300 GYGLYRPSLFSESPRSPLSPSCISPELLSPESMGLKLKPIKTRISA 345
|
|
| TAIR|locus:2050404 NDL3 "AT2G19620" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1324 (471.1 bits), Expect = 3.7e-135, P = 3.7e-135
Identities = 240/339 (70%), Positives = 294/339 (86%)
Query: 6 SDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC 65
+++VS+D+E GK++ +KT HGS+SV +YGDQ+KPAL+TYPD+ALNYMSCFQGLF C
Sbjct: 5 NNAVSLDIEEICNGGKEHHVKTCHGSVSVVVYGDQEKPALITYPDVALNYMSCFQGLFLC 64
Query: 66 PEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMG 125
PEA SLLLHNFCIYHI+PPGHEFGAA + ++P SV+DLADQI EVLN F L AVMCMG
Sbjct: 65 PEAVSLLLHNFCIYHISPPGHEFGAAPVCSNDPSPSVEDLADQILEVLNFFSLEAVMCMG 124
Query: 126 VTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185
+TAGAYIL+LFA+K++ RVLGLIL+SPLCKAPSW+EW Y KV+SNLLYYYGM G++K++
Sbjct: 125 ITAGAYILSLFAIKHKERVLGLILISPLCKAPSWSEWFYYKVVSNLLYYYGMSGLLKDIF 184
Query: 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245
L+RYFSKE RG+++VPE D+V CRRLL ER S++ FLEA+N R D+++GL+ L+CR+
Sbjct: 185 LQRYFSKEARGSSEVPERDVVHECRRLLGERHGSSLMRFLEAVNRRHDLTDGLKSLKCRT 244
Query: 246 LIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 305
LIFVG+ SPFHSE +HM + +DR+YSALVEVQACGSMVTEEQPHAMLIPME+F MG+GLY
Sbjct: 245 LIFVGDQSPFHSETLHMVTALDRKYSALVEVQACGSMVTEEQPHAMLIPMEFFFMGFGLY 304
Query: 306 RP-TLSVSPRSPLSPCCISPELLSPESMGLKLKPIKTRI 343
RP +S SPRSPLSP CISPELLSPES+GLKLKPIKTR+
Sbjct: 305 RPGRVSDSPRSPLSPSCISPELLSPESLGLKLKPIKTRV 343
|
|
| UNIPROTKB|Q3SYX0 NDRG1 "Protein NDRG1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 93/298 (31%), Positives = 154/298 (51%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+
Sbjct: 96 APGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 202
V GL+L++ A W +W +K+ G + ++++ F KE N
Sbjct: 156 MVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQN----N 204
Query: 203 SDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESSP 254
++V A R ++++ N+ F+ A NGR D+ G LQC +L+ VG+SSP
Sbjct: 205 VEVVHAYRHHVMNDMNPGNLQLFINAYNGRRDLEIERPMPGAHTVTLQCPALLVVGDSSP 264
Query: 255 FHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 312
V SK+D + L+++ CG + QP + +YF+ G G Y P+ S++
Sbjct: 265 AVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASMT 321
|
|
| UNIPROTKB|Q641F2 ndrg1-a "Protein NDRG1-A" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 96/299 (32%), Positives = 156/299 (52%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T+HG + VT+ G ++P ++TY D+ LN+ +CF LF + + H F + H++
Sbjct: 38 IETAHGIVHVTMCGTPKLNRPVILTYHDIGLNHKTCFNSLFNFEDMHEISQH-FSVCHVD 96
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + V+ GL VM +G+ AGAYILT FA+ +
Sbjct: 97 APGQQEGAASFPAGYMYPSMDQLAEMLPGVVQQLGLRTVMGLGIGAGAYILTRFALNHPS 156
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVP 201
V GL+L++ A W +W K+ G + ++++ FSK EV N P
Sbjct: 157 MVEGLVLININPCAEGWMDWAATKIS-------GWTNALPDMVISHLFSKDEVHSN---P 206
Query: 202 ESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESS 253
E +V+ R+ +L + +NV HF+++ N R D+ G L+C +L+ VG+SS
Sbjct: 207 E--LVETYRQHILHDINQNNVQHFVKSYNSRRDLEIERPIPGTNAVTLKCPALLVVGDSS 264
Query: 254 PFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 312
P V SK+D + L+++ CG QP + +YF+ G G Y P S++
Sbjct: 265 PAVDAVVECNSKLDPTKTTLLKMSDCGGFPQVIQPAKLAEAFKYFVQGMG-YMPAASMT 322
|
|
| UNIPROTKB|F1MS38 NDRG1 "Protein NDRG1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 92/298 (30%), Positives = 153/298 (51%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+
Sbjct: 96 APGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 202
V GL+L++ A W +W +K+ G + ++++ F KE N
Sbjct: 156 MVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQN----N 204
Query: 203 SDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESSP 254
++V A R ++++ N+ F+ A N R D+ G LQC +L+ VG+SSP
Sbjct: 205 VEVVHAYRHHVMNDMNPGNLQLFINAYNSRRDLEIERPMPGAHTVTLQCPALLVVGDSSP 264
Query: 255 FHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 312
V SK+D + L+++ CG + QP + +YF+ G G Y P+ S++
Sbjct: 265 AVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASMT 321
|
|
| UNIPROTKB|E1BYD4 NDRG1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 90/299 (30%), Positives = 154/299 (51%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
++T HG + VT+ G ++PA++TY D+ LN+ +CF LF + + H F + H++
Sbjct: 37 VETMHGMVHVTMCGTPRGNRPAILTYHDIGLNHKTCFNPLFNFEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + S+D LA+ + +L FGL +++ MG AGAY+LT FA+ +
Sbjct: 96 APGQQDGAPSFQAGYIYPSMDQLAEMLPGILKQFGLKSIIGMGTGAGAYVLTRFALNHPD 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE-VRGNAQVP 201
V GL+L++ A W +W K+ G + +L++ F KE + N
Sbjct: 156 MVEGLVLININPCAEGWMDWAATKIS-------GWTNALPDLVISHLFGKEEIHSN---- 204
Query: 202 ESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLR--KLQCRSLIFVGESS 253
D++ R+ ++++ +N+ F+ + N R D+ GL LQC L+ VG+SS
Sbjct: 205 -HDLIHTYRQHIINDMNQTNLHLFVNSYNSRRDLEIERPVPGLNVVTLQCPVLLVVGDSS 263
Query: 254 PFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 312
P V SK+D + L+++ CG + QP + +YF+ G G Y P+ S++
Sbjct: 264 PAVDAVVECNSKLDPTRTTLLKMADCGGLPQVSQPAKLAEAFKYFVQGMG-YMPSASMT 321
|
|
| MGI|MGI:1341799 Ndrg1 "N-myc downstream regulated gene 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 97/301 (32%), Positives = 157/301 (52%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+
Sbjct: 96 APGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHQFGLKSVIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLIL--VSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE-VRGNAQ 199
V GL+L V+P C A W +W +K+ G + ++++ F KE + N +
Sbjct: 156 MVEGLVLMNVNP-C-AEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEIHNNVE 206
Query: 200 VPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGE 251
V V R+ +L++ SN+ F+ A N R D+ G LQC +L+ VG+
Sbjct: 207 V-----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVVGD 261
Query: 252 SSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSV 311
+SP V SK+D + L+++ CG + QP + +YF+ G G Y P+ S+
Sbjct: 262 NSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASM 320
Query: 312 S 312
+
Sbjct: 321 T 321
|
|
| UNIPROTKB|E2RMB9 NDRG1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 91/298 (30%), Positives = 154/298 (51%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETVHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GAA+ S+D LA+ + VL+ FGL +++ MG AGAYILT FA+
Sbjct: 96 APGQQDGAASFPVGYMYPSMDQLAEMLPGVLHQFGLKSIIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 202
V GL+L++ A W +W +K+ G + ++++ F KE N
Sbjct: 156 MVEGLVLINVNPCAEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEMQN----N 204
Query: 203 SDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGESSP 254
++V R+ ++++ N+ F+ A N R D+ G LQC +L+ VG+SSP
Sbjct: 205 VEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPMPGAHTVTLQCPALLVVGDSSP 264
Query: 255 FHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSVS 312
V SK+D + L+++ CG + QP + +YF+ G G Y P+ S++
Sbjct: 265 AVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASMT 321
|
|
| RGD|1307303 Ndrg1 "N-myc downstream regulated 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 97/301 (32%), Positives = 157/301 (52%)
Query: 25 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN 82
I+T HGSL VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++
Sbjct: 37 IETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVD 95
Query: 83 PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG + GA + S+D LA+ + VL+ FGL +V+ MG AGAYILT FA+
Sbjct: 96 APGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHKFGLKSVIGMGTGAGAYILTRFALNNPE 155
Query: 143 RVLGLIL--VSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE-VRGNAQ 199
V GL+L V+P C A W +W +K+ G + ++++ F KE + N +
Sbjct: 156 MVEGLVLMNVNP-C-AEGWMDWAASKIS-------GWTQALPDMVVSHLFGKEEIHSNVE 206
Query: 200 VPESDIVQACRR-LLDERQSSNVWHFLEAINGRPDIS-----EGLRK--LQCRSLIFVGE 251
V V R+ +L++ SN+ F+ A N R D+ G LQC +L+ VG+
Sbjct: 207 V-----VHTYRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVVGD 261
Query: 252 SSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPTLSV 311
+SP V SK+D + L+++ CG + QP + +YF+ G G Y P+ S+
Sbjct: 262 NSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAEAFKYFVQGMG-YMPSASM 320
Query: 312 S 312
+
Sbjct: 321 T 321
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O23969 | SF21_HELAN | No assigned EC number | 0.6608 | 0.9856 | 0.9744 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 348 | |||
| pfam03096 | 284 | pfam03096, Ndr, Ndr family | 1e-138 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 1e-12 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 6e-08 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 1e-07 |
| >gnl|CDD|190521 pfam03096, Ndr, Ndr family | Back alignment and domain information |
|---|
Score = 394 bits (1013), Expect = e-138
Identities = 134/288 (46%), Positives = 172/288 (59%), Gaps = 9/288 (3%)
Query: 23 NLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYH 80
++I+T GS+ VT+YGD KP ++TY DL LN+ SCFQGLF +L NFCIYH
Sbjct: 2 HIIETPCGSVHVTVYGDPKGKKPPILTYHDLGLNHKSCFQGLFNSESM-QEILQNFCIYH 60
Query: 81 INPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140
++ PG E GAA+ P S+DDLAD I VL+HF L +V+ MGV AGAYIL FA+K+
Sbjct: 61 VDAPGQEDGAASFPGGYPYPSLDDLADMIPVVLDHFRLKSVIGMGVGAGAYILARFALKH 120
Query: 141 RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQV 200
RV GL+L++P A W EW YNK+MS LLYYYGM K+ LL YF KE N
Sbjct: 121 PERVEGLVLINPDPNAAGWIEWFYNKLMSKLLYYYGMTDSAKDYLLAHYFGKEELSN--- 177
Query: 201 PESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFVGESSPFHSE 258
SDIVQ R+ L ER N+ +LEA N R D++ L C L+ VG+ SP
Sbjct: 178 -NSDIVQEYRKFLKERLNPKNLQLYLEAYNNRRDLTIERGGLETCPVLLVVGDKSPHVDA 236
Query: 259 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYR 306
V SK+D + L++V CG +V +EQP + + FL G G YR
Sbjct: 237 VVECNSKLDPTKTTLLKVADCGGLVQQEQPGKLTESFKLFLQGMGYYR 284
|
This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases pfam00561, suggesting that this family may have an enzymatic function (Bateman A pers. obs.). Length = 284 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 67.3 bits (163), Expect = 1e-12
Identities = 41/249 (16%), Positives = 76/249 (30%), Gaps = 19/249 (7%)
Query: 55 YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN 114
+ + L + + + GH G + + S+ AD +A +L+
Sbjct: 30 FPGSSSVWRPVFKVLPALAARYRVIAPDLRGH--GRSDPAGY----SLSAYADDLAALLD 83
Query: 115 HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174
GL V+ +G + G + A+++ RV GL+L+ P L + L
Sbjct: 84 ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAA 143
Query: 175 YGMCG----------VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHF 224
++ L L + R + R +
Sbjct: 144 LADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAA 203
Query: 225 LEAINGRPDISEGLRKLQCRSLIFVGESSPFHSE--AVHMTSKIDRRYSALVEVQACGSM 282
D+ L ++ +LI GE P A + + + + LV + G
Sbjct: 204 ALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAAL-PNDARLVVIPGAGHF 262
Query: 283 VTEEQPHAM 291
E P A
Sbjct: 263 PHLEAPEAF 271
|
Length = 282 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 6e-08
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 70 SLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAG 129
L + + + PGH G + P S++D A +A +L+ GLG V+ +G + G
Sbjct: 19 EALAAGYRVLAPDLPGH--GDSDGPPRTPY-SLEDDAADLAALLDALGLGPVVLVGHSLG 75
Query: 130 AYILTLFAMKYRHRVLGLILVSPLCKAPS 158
+ A + RV GL+L+SP +
Sbjct: 76 GAVALAAAARRPERVAGLVLISPPLRDLE 104
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 1e-07
Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 28/196 (14%)
Query: 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTL 135
F + + G + D DDLA+ + +L+ GL V +G + G I
Sbjct: 1 FDVIAFDLRGFGRSSPPK--DFADYRFDDLAEDLEALLDALGLDKVNLVGHSMGGLIALA 58
Query: 136 FAMKYRHRVLGLILVSPLC----KAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191
+A KY RV L+LV + +P ++ + ++ E LL R
Sbjct: 59 YAAKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLD--NFFNRLYDSVEALLGRAI- 115
Query: 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLE---------AINGR---PDISEGLR 239
+ ++ L + + S++ F E G D S L+
Sbjct: 116 -------KQFQALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALK 168
Query: 240 KLQCRSLIFVGESSPF 255
+ +LI G+ P
Sbjct: 169 DIDVPTLIIWGDDDPL 184
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 348 | |||
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PRK07581 | 339 | hypothetical protein; Validated | 100.0 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.98 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.98 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.98 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.98 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.97 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.96 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.96 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.96 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.96 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.95 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.95 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.95 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.95 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.94 | |
| PLN02511 | 388 | hydrolase | 99.94 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.94 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.93 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.92 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.91 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.91 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.91 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.9 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.89 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.88 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.88 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.87 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.87 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.86 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.85 | |
| PRK10566 | 249 | esterase; Provisional | 99.84 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.84 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.83 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.82 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.8 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.78 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.78 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.74 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.74 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.71 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.7 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.68 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.67 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.66 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.65 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.65 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.64 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.62 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.61 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.59 | |
| PLN00021 | 313 | chlorophyllase | 99.59 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.58 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.57 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.57 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.56 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.52 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.51 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.51 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.5 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.49 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.49 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.45 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.44 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.41 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.41 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.39 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.38 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.38 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.37 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.37 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.37 | |
| PRK10115 | 686 | protease 2; Provisional | 99.37 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.34 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.28 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.26 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.25 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.25 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.25 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.24 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.22 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.22 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.22 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.13 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.11 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.11 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.09 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.05 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.05 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.04 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.0 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.96 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.96 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.95 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.94 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.91 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.89 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.85 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.84 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.8 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.79 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.78 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.78 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.76 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.74 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.73 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.71 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.7 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.69 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.67 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.67 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.65 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.64 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.63 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.61 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.61 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.6 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.59 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.53 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.51 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.49 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.28 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.28 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.2 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.19 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.17 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.17 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.12 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.1 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.1 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.01 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.0 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.99 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.98 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.94 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 97.93 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.9 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.89 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.85 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.83 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.81 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.78 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 97.73 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 97.68 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.63 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 97.58 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.56 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.55 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.54 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 97.43 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.43 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.42 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.41 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.34 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.33 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.32 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.31 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 97.3 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.25 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 97.21 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.19 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.09 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.09 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 96.99 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.96 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 96.72 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 96.59 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 96.58 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.54 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.45 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.39 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 96.32 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.2 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.18 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 96.11 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.97 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.93 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 95.81 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 95.62 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 95.61 | |
| PLN02408 | 365 | phospholipase A1 | 95.37 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.32 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 95.25 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 95.15 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.06 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 94.86 | |
| PLN02324 | 415 | triacylglycerol lipase | 94.82 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 94.76 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 94.62 | |
| PLN02310 | 405 | triacylglycerol lipase | 94.6 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 94.58 | |
| PLN02802 | 509 | triacylglycerol lipase | 94.48 | |
| PLN02753 | 531 | triacylglycerol lipase | 94.19 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 93.98 | |
| PLN02719 | 518 | triacylglycerol lipase | 93.9 | |
| PLN02761 | 527 | lipase class 3 family protein | 93.78 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 93.57 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 93.27 | |
| PLN02847 | 633 | triacylglycerol lipase | 93.04 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 92.77 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 91.96 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 91.88 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 91.29 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 90.92 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 90.79 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 90.13 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 88.17 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 86.44 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 86.44 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 83.21 | |
| TIGR03131 | 295 | malonate_mdcH malonate decarboxylase, epsilon subu | 82.38 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 80.41 |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=243.42 Aligned_cols=315 Identities=47% Similarity=0.791 Sum_probs=281.1
Q ss_pred CCCCCCCceEEecCCCCCCC---ccceeecCCceeEEEEccCCC--CCeEEEeCCCCCChhhhccccccchhhhhhccCC
Q 018947 1 MADSSSDSVSIDMETPPPSG---KDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN 75 (348)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~l~~~~~g~~~--~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g 75 (348)
|++ ..+..+.|+...-..+ +++.|+|..|.+++.++|+++ +|++|-.|.+|.++.++++.+|..+.+..++.+
T Consensus 1 M~~-~~~~~~~d~~pl~~~~~~~~e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~- 78 (326)
T KOG2931|consen 1 MAE-LQDVVSTDIKPLLEGGATCQEHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH- 78 (326)
T ss_pred CCc-ccccccccchhhhcCCCcceeeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-
Confidence 555 4455556777766666 899999999999999999876 899999999999999999999998887777766
Q ss_pred eEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 76 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
|.|+-+|.|||-...+..+.+....++++++++|..++++++.+.++-+|.-.|++|..++|..||++|.+|||+++...
T Consensus 79 fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 79 FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC 158 (326)
T ss_pred eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC
Confidence 99999999999888777777778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcCCccH
Q 018947 156 APSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDI 234 (348)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (348)
.++|.+|...+.....++..++...+.+.++.+.|+.+.... +.++.+.|++.+.+. ++.++..++++++.|.|+
T Consensus 159 a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~----~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL 234 (326)
T KOG2931|consen 159 AKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN----NSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDL 234 (326)
T ss_pred CchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc----cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCc
Confidence 999999999999999999999999999999999999988765 788999999988775 668999999999998888
Q ss_pred HhhhccC----CccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhccccCCC-C
Q 018947 235 SEGLRKL----QCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPT-L 309 (348)
Q Consensus 235 ~~~l~~i----~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~-~ 309 (348)
....... +||+|++.|++.+.++...++..++...+..+..+.++|-.+..++|..+++.+.-|++++|..++. -
T Consensus 235 ~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~~s~~~ 314 (326)
T KOG2931|consen 235 SIERPKLGTTLKCPVLLVVGDNSPHVSAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYLPSASM 314 (326)
T ss_pred cccCCCcCccccccEEEEecCCCchhhhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCCccccccc
Confidence 7655544 4999999999999998888999999988899999999999999999999999999999999998876 6
Q ss_pred CCCCCCCCCCCC
Q 018947 310 SVSPRSPLSPCC 321 (348)
Q Consensus 310 ~~~~~~~~~~~~ 321 (348)
++.++++.++++
T Consensus 315 ~~~~Rsr~~s~~ 326 (326)
T KOG2931|consen 315 TRLPRSRTSSTS 326 (326)
T ss_pred ccCcccccCCCC
Confidence 666777766543
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=251.03 Aligned_cols=263 Identities=17% Similarity=0.204 Sum_probs=173.0
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC---CC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD---DE 97 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~---~~ 97 (348)
+..+++.++.+++|...|+ .+++|||+||+++++..|.... ..+++.|+|+++|+||||.|+.+.+. ..
T Consensus 9 ~~~~~~~~~~~i~y~~~G~-~~~~vlllHG~~~~~~~w~~~~-------~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~ 80 (294)
T PLN02824 9 ETRTWRWKGYNIRYQRAGT-SGPALVLVHGFGGNADHWRKNT-------PVLAKSHRVYAIDLLGYGYSDKPNPRSAPPN 80 (294)
T ss_pred CCceEEEcCeEEEEEEcCC-CCCeEEEECCCCCChhHHHHHH-------HHHHhCCeEEEEcCCCCCCCCCCcccccccc
Confidence 4567788899999999884 3589999999999987764322 44566789999999999999854221 12
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC---C--hHHHHHHHHHHHHH
Q 018947 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP---S--WTEWLYNKVMSNLL 172 (348)
Q Consensus 98 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~---~--~~~~~~~~~~~~~~ 172 (348)
..++++++++++.+++++++.++++++||||||++++.+|.++|++|+++|++++..... . .........+...+
T Consensus 81 ~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
T PLN02824 81 SFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLL 160 (294)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHH
Confidence 358999999999999999999999999999999999999999999999999999765321 0 00000000011110
Q ss_pred Hhh----------ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHH--cCCccHHhhhcc
Q 018947 173 YYY----------GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRK 240 (348)
Q Consensus 173 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 240 (348)
... ...... ...+...+.... ....+..+.+.... ........+...+ .........+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (294)
T PLN02824 161 RETAVGKAFFKSVATPETV-KNILCQCYHDDS-----AVTDELVEAILRPG--LEPGAVDVFLDFISYSGGPLPEELLPA 232 (294)
T ss_pred hchhHHHHHHHhhcCHHHH-HHHHHHhccChh-----hccHHHHHHHHhcc--CCchHHHHHHHHhccccccchHHHHhh
Confidence 000 000000 111111111110 00222222221110 1111111111111 122233456889
Q ss_pred CCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 241 LQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 241 i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+++|+++|+|++|.+++ ..+.+.+.+++ .++++++++||++++|+|+++++.|.+|+++
T Consensus 233 i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 233 VKCPVLIAWGEKDPWEPVELGRAYANFDAV--EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred cCCCeEEEEecCCCCCChHHHHHHHhcCCc--cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 99999999999999883 44456666654 7899999999999999999999999999976
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=252.47 Aligned_cols=276 Identities=14% Similarity=0.226 Sum_probs=176.2
Q ss_pred ecCCCCCCCccceeecCCc-eeEEEEccCC----CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC
Q 018947 12 DMETPPPSGKDNLIKTSHG-SLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH 86 (348)
Q Consensus 12 ~~~~~~~~~~~~~v~~~~~-~l~~~~~g~~----~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 86 (348)
+++...+.....++..++. +++|...|++ .+|+|||+||++++...|.... ..+.++|+|+++|+|||
T Consensus 53 ~~~~~~~~~~~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~-------~~L~~~~~via~Dl~G~ 125 (360)
T PLN02679 53 EAELEEIYERCKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNI-------GVLAKNYTVYAIDLLGF 125 (360)
T ss_pred cccHHHhhccCceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHH-------HHHhcCCEEEEECCCCC
Confidence 3333344445556666777 9999999965 5689999999999987764333 45567999999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHH-hCCCCcceEEEecCCCCCCCh---HHH
Q 018947 87 EFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM-KYRHRVLGLILVSPLCKAPSW---TEW 162 (348)
Q Consensus 87 G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~---~~~ 162 (348)
|.|+.+. ...++++++++++.+++++++.++++|+||||||.+++.++. .+|++|+++|++++....... ..+
T Consensus 126 G~S~~~~---~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~ 202 (360)
T PLN02679 126 GASDKPP---GFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDW 202 (360)
T ss_pred CCCCCCC---CccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchH
Confidence 9997542 235899999999999999999999999999999999999887 479999999999986542110 111
Q ss_pred HHHHH-----HHHHH-Hhhccch-hH----HHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHc--
Q 018947 163 LYNKV-----MSNLL-YYYGMCG-VV----KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN-- 229 (348)
Q Consensus 163 ~~~~~-----~~~~~-~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 229 (348)
..... ....+ ....... .. ....+..++....... ....++..+.+..... .......+.....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 279 (360)
T PLN02679 203 RIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNK-EAVDDELVEIIRGPAD--DEGALDAFVSIVTGP 279 (360)
T ss_pred HHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCc-ccCCHHHHHHHHhhcc--CCChHHHHHHHHhcC
Confidence 10000 00000 0000000 00 0011111111100000 0002233333222111 1111111111111
Q ss_pred CCccHHhhhccCCccEEEEecCCCCCCchH-------HHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 230 GRPDISEGLRKLQCRSLIFVGESSPFHSEA-------VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 230 ~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~-------~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
...+....+.++++|+|+|+|++|.+++.. ..+.+.+++ .++++++++||++++|+|+++++.|.+||++.
T Consensus 280 ~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~--~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 280 PGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN--VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred CCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc--eEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 123455678899999999999999988432 234555666 89999999999999999999999999999875
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=245.68 Aligned_cols=259 Identities=17% Similarity=0.173 Sum_probs=171.6
Q ss_pred ceeecCCceeEEEEc-cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIY-GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~-g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
+++++++.+++|... |.+++++|||+||++++...|... ...+.++|+|+++|+||||.|+.+ ...++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~-------~~~L~~~~~vi~~Dl~G~G~S~~~----~~~~~ 73 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPF-------IEALDPDLEVIAFDVPGVGGSSTP----RHPYR 73 (276)
T ss_pred EEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHH-------HHHhccCceEEEECCCCCCCCCCC----CCcCc
Confidence 356678899999775 334557899999999998765322 355677899999999999999744 23579
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHH-HHHHHHHHhhccchh
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN-KVMSNLLYYYGMCGV 180 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 180 (348)
++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++............. ............ ..
T Consensus 74 ~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 152 (276)
T TIGR02240 74 FPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQP-SH 152 (276)
T ss_pred HHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhcc-cc
Confidence 9999999999999999999999999999999999999999999999999987653211000000 000000000000 00
Q ss_pred HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--h
Q 018947 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--E 258 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~ 258 (348)
. ......++...... .+........................... .+..+.+.++++|+++|+|++|++++ .
T Consensus 153 ~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~v~~~~ 225 (276)
T TIGR02240 153 G-IHIAPDIYGGAFRR-----DPELAMAHASKVRSGGKLGYYWQLFAGLG-WTSIHWLHKIQQPTLVLAGDDDPIIPLIN 225 (276)
T ss_pred c-cchhhhhccceeec-----cchhhhhhhhhcccCCCchHHHHHHHHcC-CchhhHhhcCCCCEEEEEeCCCCcCCHHH
Confidence 0 00111122211110 11222222111111111111111111111 23345678999999999999999984 4
Q ss_pred HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 259 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
.+.+.+.+++ +++++++ +||++++|+|+++++.|.+|+++..
T Consensus 226 ~~~l~~~~~~--~~~~~i~-~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 226 MRLLAWRIPN--AELHIID-DGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred HHHHHHhCCC--CEEEEEc-CCCchhhccHHHHHHHHHHHHHHhh
Confidence 5668888887 8899997 5999999999999999999999864
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=246.98 Aligned_cols=276 Identities=9% Similarity=0.017 Sum_probs=173.2
Q ss_pred CCceEEecCCCCCCCccceeecCC-----ceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEE
Q 018947 6 SDSVSIDMETPPPSGKDNLIKTSH-----GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYH 80 (348)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~v~~~~-----~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 80 (348)
+++.-.....+++..+ +++.++ .+++|...|++++|+|||+||++.+...|.. .+..+..+||+|++
T Consensus 7 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~------~~~~L~~~gy~vi~ 78 (302)
T PRK00870 7 PDSRFENLPDYPFAPH--YVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRK------MIPILAAAGHRVIA 78 (302)
T ss_pred CcccccCCcCCCCCce--eEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHH------HHHHHHhCCCEEEE
Confidence 3444444555666444 555555 5799999997778999999999988776542 22344346899999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh-
Q 018947 81 INPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW- 159 (348)
Q Consensus 81 ~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~- 159 (348)
+|+||||.|+.+ .....++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.......
T Consensus 79 ~Dl~G~G~S~~~--~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 156 (302)
T PRK00870 79 PDLIGFGRSDKP--TRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP 156 (302)
T ss_pred ECCCCCCCCCCC--CCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc
Confidence 999999999754 11235899999999999999999999999999999999999999999999999999875322110
Q ss_pred -HHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHc---------
Q 018947 160 -TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--------- 229 (348)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 229 (348)
.... ..+.... .... ...+..++....... ...+....+..................+.
T Consensus 157 ~~~~~--~~~~~~~--~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (302)
T PRK00870 157 MPDAF--WAWRAFS--QYSP----VLPVGRLVNGGTVRD---LSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAV 225 (302)
T ss_pred chHHH--hhhhccc--ccCc----hhhHHHHhhcccccc---CCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcch
Confidence 1000 0000000 0000 000011110000000 01111111110000000000000000000
Q ss_pred -CCccHHhhhccCCccEEEEecCCCCCCc-hHHHHHHhhccCC-cEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 230 -GRPDISEGLRKLQCRSLIFVGESSPFHS-EAVHMTSKIDRRY-SALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 230 -~~~~~~~~l~~i~~Pvl~i~g~~D~~~~-~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
...+....+.++++|+++|+|++|++++ ....+.+.+++.. ..+++++++||++++|+|+++++.|.+|+++.
T Consensus 226 ~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 226 AANRAAWAVLERWDKPFLTAFSDSDPITGGGDAILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HHHHHHHHhhhcCCCceEEEecCCCCcccCchHHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 0011224567899999999999999983 3356788888621 23789999999999999999999999999764
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=232.47 Aligned_cols=279 Identities=47% Similarity=0.782 Sum_probs=213.5
Q ss_pred cceeecCCceeEEEEccCCC--CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~--~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
|+.++|+.|.+++..+|+++ +|+||-.|-.|.|+.++++.+|.. .....+.+.|.|+-+|.||+...++..+.+...
T Consensus 1 eh~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~-~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNF-EDMQEILQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCS-HHHHHHHTTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcc-hhHHHHhhceEEEEEeCCCCCCCcccccccccc
Confidence 57799999999999999876 999999999999999999888776 446667789999999999999888877777788
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccch
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (348)
.|++++++++.+++++++++.++.+|...||+|..++|..+|++|.++||+++.....+|.+|...+...+.+...++..
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~ 159 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTS 159 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS
T ss_pred cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhh-hchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCch
Q 018947 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSE 258 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~ 258 (348)
...+.++.++|+...... +.++.+.+++.+.+ .++.++..+++++..|.|+........||+|++.|+..+..+.
T Consensus 160 ~~~d~Ll~h~Fg~~~~~~----n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~ 235 (283)
T PF03096_consen 160 SVKDYLLWHYFGKEEEEN----NSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDD 235 (283)
T ss_dssp -HHHHHHHHHS-HHHHHC----T-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHH
T ss_pred chHHhhhhcccccccccc----cHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhh
Confidence 999999999999887654 67889999988876 4678999999999999999988888999999999999999988
Q ss_pred HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcccc
Q 018947 259 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLY 305 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 305 (348)
..++..++...+.+++.++++|-++..|+|+.+++.+.=||+++|+.
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G~~ 282 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMGYL 282 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTTB-
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCCcC
Confidence 88999999988899999999999999999999999999999999874
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=234.03 Aligned_cols=275 Identities=16% Similarity=0.211 Sum_probs=188.6
Q ss_pred CCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 19 ~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
..+..++..++.+++|...|..++|.|+++||+..+..+|.... ..+...||+|+++|+||+|.|+.| ....
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~------~~la~~~~rviA~DlrGyG~Sd~P--~~~~ 92 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQI------PGLASRGYRVIAPDLRGYGFSDAP--PHIS 92 (322)
T ss_pred hcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhh------hhhhhcceEEEecCCCCCCCCCCC--CCcc
Confidence 34566777888999999999999999999999999998886555 566677899999999999999977 3357
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH------HHHHH
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV------MSNLL 172 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~ 172 (348)
.|++..++.|+..++++++.++++++||+||+++|+.+|..+|++|+++|.++.....+.......... ..-.+
T Consensus 93 ~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~f 172 (322)
T KOG4178|consen 93 EYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLF 172 (322)
T ss_pred eeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEec
Confidence 899999999999999999999999999999999999999999999999999997776221111100000 00000
Q ss_pred Hhhc-----cchhHHHHHHHhhhccccc-----CC-CCC----CChHHHHHHHHHHhhhchhhHHHHHHHHcCCcc-HHh
Q 018947 173 YYYG-----MCGVVKELLLKRYFSKEVR-----GN-AQV----PESDIVQACRRLLDERQSSNVWHFLEAINGRPD-ISE 236 (348)
Q Consensus 173 ~~~~-----~~~~~~~~~~~~~~~~~~~-----~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 236 (348)
...+ +.....+.+...++..... .. ... ...+-.+.+...+......+...+.+.+..... ...
T Consensus 173 Q~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~ 252 (322)
T KOG4178|consen 173 QEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPW 252 (322)
T ss_pred cccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccc
Confidence 0000 0001111222222221111 00 000 012223333333333333344555555544332 234
Q ss_pred hhccCCccEEEEecCCCCCCch---HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 237 GLRKLQCRSLIFVGESSPFHSE---AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 237 ~l~~i~~Pvl~i~g~~D~~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+..+++|+++|+|+.|.+.+. ...+.+.++. ..+.++++++||+++.|+|+++++.|.+|+++.
T Consensus 253 ~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~-l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 253 ALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR-LTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccccceEEEEecCcccccchhHHHHHHHhhcc-ccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 5678999999999999998832 2334455554 247888999999999999999999999999875
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=243.00 Aligned_cols=268 Identities=12% Similarity=0.107 Sum_probs=173.4
Q ss_pred CCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 19 ~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
+.+...++.++.+++|...| ++++|||+||++++...|... ...+.+.|+||++|+||||.|+.+. .
T Consensus 6 ~~~~~~~~~~g~~i~y~~~G--~g~~vvllHG~~~~~~~w~~~-------~~~L~~~~~via~D~~G~G~S~~~~----~ 72 (295)
T PRK03592 6 PGEMRRVEVLGSRMAYIETG--EGDPIVFLHGNPTSSYLWRNI-------IPHLAGLGRCLAPDLIGMGASDKPD----I 72 (295)
T ss_pred CCcceEEEECCEEEEEEEeC--CCCEEEEECCCCCCHHHHHHH-------HHHHhhCCEEEEEcCCCCCCCCCCC----C
Confidence 34555677889999999999 568999999999988766432 2445556799999999999998552 2
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHH-HHHHHHHHHHhhcc
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL-YNKVMSNLLYYYGM 177 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 177 (348)
.++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++......+.... ........+.....
T Consensus 73 ~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (295)
T PRK03592 73 DYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGE 152 (295)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccc
Confidence 48999999999999999999999999999999999999999999999999999854332211100 00111111111110
Q ss_pred ch-hH--HHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHHc----------CCccHHhhhccCCc
Q 018947 178 CG-VV--KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAIN----------GRPDISEGLRKLQC 243 (348)
Q Consensus 178 ~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~l~~i~~ 243 (348)
.. .. ...+...++....... ..++....+...+.... ......+..... ...+....+.++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 229 (295)
T PRK03592 153 GEEMVLEENVFIERVLPGSILRP---LSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDV 229 (295)
T ss_pred ccccccchhhHHhhcccCccccc---CCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCC
Confidence 00 00 0111121211111000 02222222222111110 001111111100 00123455778999
Q ss_pred cEEEEecCCCCCC-ch-HHHH-HHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhccc
Q 018947 244 RSLIFVGESSPFH-SE-AVHM-TSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 304 (348)
Q Consensus 244 Pvl~i~g~~D~~~-~~-~~~~-~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 304 (348)
|+|+|+|++|.++ +. ...+ .+.+++ .++++++++||++++|+|+++++.|.+|+++...
T Consensus 230 P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 230 PKLLINAEPGAILTTGAIRDWCRSWPNQ--LEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CeEEEeccCCcccCcHHHHHHHHHhhhh--cceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 9999999999998 43 3233 344565 8899999999999999999999999999998753
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=239.65 Aligned_cols=271 Identities=13% Similarity=0.130 Sum_probs=170.3
Q ss_pred cCCceeEEEEccCCC-------CCeEEEeCCCCCChhhhcccccc---chhhhhhccCCeEEEEeCCCCCCCCCCCCCC-
Q 018947 27 TSHGSLSVTIYGDQD-------KPALVTYPDLALNYMSCFQGLFF---CPEACSLLLHNFCIYHINPPGHEFGAAAISD- 95 (348)
Q Consensus 27 ~~~~~l~~~~~g~~~-------~p~vvllHG~~~~~~~~~~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~- 95 (348)
.++.+++|...|++. +|+|||+||++++...|+...+. +.....++.++|+||++|+||||.|+.+...
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 356789999999655 78999999999988766421110 0111234468899999999999999754211
Q ss_pred --CCCCCCHHHHHHHHHHHH-HHcCCCcee-EEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 96 --DEPVLSVDDLADQIAEVL-NHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 96 --~~~~~~~~~~~~dl~~~l-~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
....++++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++.........+.........
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~ 206 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIES 206 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHH
Confidence 012489999999988854 889999985 8999999999999999999999999999886532211111111111111
Q ss_pred HHhh------ccc--h-hHHHHH-HHhhhccc----ccCCCCCCChHH-HHHHHHHHh---hhchhhHHHHHHHHcCCcc
Q 018947 172 LYYY------GMC--G-VVKELL-LKRYFSKE----VRGNAQVPESDI-VQACRRLLD---ERQSSNVWHFLEAINGRPD 233 (348)
Q Consensus 172 ~~~~------~~~--~-~~~~~~-~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 233 (348)
.... ... . ...... ...++... ..... ..... ...+..... ......+...+... ...+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d 283 (360)
T PRK06489 207 IRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQA--PTRAAADKLVDERLAAPVTADANDFLYQWDSS-RDYN 283 (360)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhc--CChHHHHHHHHHHHHhhhhcCHHHHHHHHHHh-hccC
Confidence 1100 000 0 000000 00000000 00000 01111 111111111 11122222222222 2346
Q ss_pred HHhhhccCCccEEEEecCCCCCCchH----HHHHHhhccCCcEEEEecCC----CCCccccChhhhHHHHHHHHhhcc
Q 018947 234 ISEGLRKLQCRSLIFVGESSPFHSEA----VHMTSKIDRRYSALVEVQAC----GSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 234 ~~~~l~~i~~Pvl~i~g~~D~~~~~~----~~~~~~~~~~~~~~~~~~~~----gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
..+.+.+|++|+|+|+|++|.+++.. +.+++.+++ +++++++++ ||+++ ++|++|++.|.+||+++.
T Consensus 284 ~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~--a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 284 PSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH--GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred hHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC--CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 67789999999999999999988432 467888887 899999986 99997 899999999999998764
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=234.36 Aligned_cols=263 Identities=14% Similarity=0.160 Sum_probs=167.5
Q ss_pred CCCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~ 97 (348)
++....++++++.+++|...| .+++|||+||++.+...|... ...+.++|+|+++|+||||.|+.+. .
T Consensus 12 ~~~~~~~~~~~~~~i~y~~~G--~~~~iv~lHG~~~~~~~~~~~-------~~~l~~~~~vi~~D~~G~G~S~~~~---~ 79 (286)
T PRK03204 12 YPFESRWFDSSRGRIHYIDEG--TGPPILLCHGNPTWSFLYRDI-------IVALRDRFRCVAPDYLGFGLSERPS---G 79 (286)
T ss_pred ccccceEEEcCCcEEEEEECC--CCCEEEEECCCCccHHHHHHH-------HHHHhCCcEEEEECCCCCCCCCCCC---c
Confidence 345667888999999999998 468999999998776655322 3556778999999999999997542 2
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 98 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
..++++++++++.+++++++.++++++||||||.+++.++..+|++|+++|++++.......... ............
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~ 156 (286)
T PRK03204 80 FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAM---KAFSRVMSSPPV 156 (286)
T ss_pred cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhH---HHHHHHhccccc
Confidence 35789999999999999999999999999999999999999999999999998876432211100 000000000000
Q ss_pred c-hhH-HHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhch-hhHHHHHHHHcCCc----cHHhhhcc--CCccEEEE
Q 018947 178 C-GVV-KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRP----DISEGLRK--LQCRSLIF 248 (348)
Q Consensus 178 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~l~~--i~~Pvl~i 248 (348)
. ... ......+++....... ........+......... .........+.... +....+.. +++|+++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI 233 (286)
T PRK03204 157 QYAILRRNFFVERLIPAGTEHR---PSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLV 233 (286)
T ss_pred hhhhhhhhHHHHHhccccccCC---CCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEE
Confidence 0 000 0111222221111000 012222222111000000 00000000000000 01011111 28999999
Q ss_pred ecCCCCCC-ch--HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 249 VGESSPFH-SE--AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 249 ~g~~D~~~-~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+|++|.++ +. .+.+.+.+++ .++++++++||++++|+|+++++.|.+||.
T Consensus 234 ~G~~D~~~~~~~~~~~~~~~ip~--~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 234 WGMKDVAFRPKTILPRLRATFPD--HVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred ecCCCcccCcHHHHHHHHHhcCC--CeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 99999986 32 4567888887 999999999999999999999999999973
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=232.87 Aligned_cols=261 Identities=15% Similarity=0.174 Sum_probs=165.3
Q ss_pred ccceeecC---CceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTS---HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (348)
Q Consensus 21 ~~~~v~~~---~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~ 97 (348)
+...++.+ +.+++|...| ++|+|||+||++.+...|.... ..+..++++||+|+++|+||||.|+.+.. .
T Consensus 8 ~~~~~~~~~~~~~~~~y~~~g--~~~~ivllHG~~~~~~~~~~~~---~~~~~l~~~~~~vi~~D~~G~G~S~~~~~--~ 80 (282)
T TIGR03343 8 KFVKINEKGLSNFRIHYNEAG--NGEAVIMLHGGGPGAGGWSNYY---RNIGPFVDAGYRVILKDSPGFNKSDAVVM--D 80 (282)
T ss_pred eEEEcccccccceeEEEEecC--CCCeEEEECCCCCchhhHHHHH---HHHHHHHhCCCEEEEECCCCCCCCCCCcC--c
Confidence 44444444 3468888887 5688999999998876653211 22245667799999999999999975421 1
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH---HHHHHHHHHHHHHh
Q 018947 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT---EWLYNKVMSNLLYY 174 (348)
Q Consensus 98 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~ 174 (348)
...+ ..+++++.++++.++.++++++||||||++++.+|.++|++|+++|++++........ ............ .
T Consensus 81 ~~~~-~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 158 (282)
T TIGR03343 81 EQRG-LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLY-A 158 (282)
T ss_pred cccc-chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHh-c
Confidence 1122 2568999999999999999999999999999999999999999999999764321100 000000111100 0
Q ss_pred hccchhHHHHHHHhh-hcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHH----HcCCccHHhhhccCCccEEEEe
Q 018947 175 YGMCGVVKELLLKRY-FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA----INGRPDISEGLRKLQCRSLIFV 249 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~i~~Pvl~i~ 249 (348)
....... ....... +..... .....+........ .+.....+... .....+....+.++++|+|+++
T Consensus 159 ~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~ 230 (282)
T TIGR03343 159 EPSYETL-KQMLNVFLFDQSLI------TEELLQGRWENIQR-QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTW 230 (282)
T ss_pred CCCHHHH-HHHHhhCccCcccC------cHHHHHhHHHHhhc-CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEE
Confidence 0000011 1111111 111100 12222211111111 11111111111 0112344566889999999999
Q ss_pred cCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 250 GESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 250 g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
|++|.++ .....+++.+++ +++++++++||+++.|+|+++++.|.+||+
T Consensus 231 G~~D~~v~~~~~~~~~~~~~~--~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 231 GRDDRFVPLDHGLKLLWNMPD--AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred ccCCCcCCchhHHHHHHhCCC--CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 9999988 355678888887 999999999999999999999999999986
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=239.80 Aligned_cols=274 Identities=14% Similarity=0.175 Sum_probs=169.3
Q ss_pred ccceeecCCceeEEEEccCCC---CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQD---KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~---~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~ 97 (348)
...++.+++.+++|...|+++ +++|||+||++++...|....+ +.+.....++|+|+++|+||||.|+.+. .
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~--~~L~~~~~~~yrVia~Dl~G~G~S~~p~---~ 251 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLF--PNFSDAAKSTYRLFAVDLLGFGRSPKPA---D 251 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHH--HHHHHHhhCCCEEEEECCCCCCCCcCCC---C
Confidence 345677788899999998654 5799999999999876642210 1112233479999999999999997542 2
Q ss_pred CCCCHHHHHHHHH-HHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhc
Q 018947 98 PVLSVDDLADQIA-EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 98 ~~~~~~~~~~dl~-~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (348)
..++++++++++. .++++++.++++++||||||++++.+|.++|++|+++|++++........................
T Consensus 252 ~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (481)
T PLN03087 252 SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRV 331 (481)
T ss_pred CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhccccc
Confidence 4589999999995 899999999999999999999999999999999999999998655322111110111100000000
Q ss_pred cchhHHHHHHHhhhcccccCC--CCCCChHHHHHHHHHHhhhch-------------hhHHHHHHHHc-C-----CccHH
Q 018947 177 MCGVVKELLLKRYFSKEVRGN--AQVPESDIVQACRRLLDERQS-------------SNVWHFLEAIN-G-----RPDIS 235 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~-~-----~~~~~ 235 (348)
+...........|+....... .........+.+......... ......+..+. . .....
T Consensus 332 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~ 411 (481)
T PLN03087 332 WPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLD 411 (481)
T ss_pred CCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHH
Confidence 000000011111111000000 000011111111111100000 00000000000 0 01122
Q ss_pred hhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccc-cChhhhHHHHHHHHhh
Q 018947 236 EGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMG 301 (348)
Q Consensus 236 ~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 301 (348)
..+.++++|+|+|+|++|.+++ ..+.+++.+++ +++++++++||++++ |+|+++++.|.+|.+.
T Consensus 412 ~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~--a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 412 HVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPR--ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 2334789999999999999983 45568888987 999999999999996 9999999999999864
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-32 Score=221.13 Aligned_cols=275 Identities=19% Similarity=0.239 Sum_probs=178.6
Q ss_pred CCCCCccceeecCCceeEEE-Ec--cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC
Q 018947 16 PPPSGKDNLIKTSHGSLSVT-IY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (348)
Q Consensus 16 ~~~~~~~~~v~~~~~~l~~~-~~--g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 92 (348)
.++.....++.+.++.-.|. .. .+.+++++||+||+|.+...|+..+ .-+++.++|+++|++|+|.|++|
T Consensus 61 ~~v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf-------~~La~~~~vyaiDllG~G~SSRP 133 (365)
T KOG4409|consen 61 VPVPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNF-------DDLAKIRNVYAIDLLGFGRSSRP 133 (365)
T ss_pred cCCCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhh-------hhhhhcCceEEecccCCCCCCCC
Confidence 34445555566544332232 22 2357789999999999987776665 55566999999999999999987
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh----------HHH
Q 018947 93 ISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW----------TEW 162 (348)
Q Consensus 93 ~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----------~~~ 162 (348)
.-..+.......+++-++++....++++.+|+|||+||+++..||.+||++|+.|||++|....... ..|
T Consensus 134 ~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w 213 (365)
T KOG4409|consen 134 KFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEW 213 (365)
T ss_pred CCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHH
Confidence 6555555667789999999999999999999999999999999999999999999999998875422 111
Q ss_pred HHHHHHHH---------HHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHH----c
Q 018947 163 LYNKVMSN---------LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI----N 229 (348)
Q Consensus 163 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 229 (348)
. ..+.. .++..| ++. ..++.++-...+........++.+-.+.-.....++.+-..+-..+ .
T Consensus 214 ~--~~~~~~~~~~nPl~~LR~~G--p~G-p~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~ 288 (365)
T KOG4409|consen 214 Y--KALFLVATNFNPLALLRLMG--PLG-PKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGW 288 (365)
T ss_pred H--hhhhhhhhcCCHHHHHHhcc--ccc-hHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccch
Confidence 1 00000 011111 110 1122222111111111011233322222222222222222111111 0
Q ss_pred CCccHHhhhccCC--ccEEEEecCCCCCC-chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 230 GRPDISEGLRKLQ--CRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 230 ~~~~~~~~l~~i~--~Pvl~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+....+.+..++ ||+++|+|++|.+- ....++...+....++.++++++||.+.+++|+.|++.+.++++..
T Consensus 289 Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 289 ARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hhhhHHHHHHhhccCCCEEEEecCcccccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 1233445555555 99999999999886 5566666666665699999999999999999999999999998763
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-31 Score=227.16 Aligned_cols=262 Identities=15% Similarity=0.127 Sum_probs=171.2
Q ss_pred CccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
....++++++.+++|...|++++|+|||+||++++...|... ...+.++|+|+++|+||||.|+.+. ...
T Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~-------~~~l~~~~~vi~~D~~G~G~S~~~~---~~~ 75 (278)
T TIGR03056 6 DCSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDL-------MPPLARSFRVVAPDLPGHGFTRAPF---RFR 75 (278)
T ss_pred CccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHH-------HHHHhhCcEEEeecCCCCCCCCCcc---ccC
Confidence 344567889999999999977789999999999988765322 3556778999999999999997542 235
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh-HHHHHHHHHHHHHHhhccc
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNLLYYYGMC 178 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 178 (348)
++++++++|+.+++++++.++++++||||||.+++.+|.++|++++++|++++....... ..... ..+..........
T Consensus 76 ~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 154 (278)
T TIGR03056 76 FTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLF-PYMARVLACNPFT 154 (278)
T ss_pred CCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccccccc-chhhHhhhhcccc
Confidence 899999999999999999999999999999999999999999999999999876542110 00000 0000000000000
Q ss_pred hhHHH------HHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHc--CCccHHhhhccCCccEEEEec
Q 018947 179 GVVKE------LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 179 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvl~i~g 250 (348)
..... .....++....... .......+..... ...........+. ........+.++++|+++|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g 228 (278)
T TIGR03056 155 PPMMSRGAADQQRVERLIRDTGSLL----DKAGMTYYGRLIR--SPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAG 228 (278)
T ss_pred hHHHHhhcccCcchhHHhhcccccc----ccchhhHHHHhhc--CchhhhHHHHHhhcccccchhhhcccCCCCEEEEEe
Confidence 00000 00000110000000 1111111111111 0000111111111 111234557789999999999
Q ss_pred CCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 251 ESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 251 ~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
++|.+++ ..+.+.+.+++ +++++++++||+++.|.|+++++.|.+|++
T Consensus 229 ~~D~~vp~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 229 EEDKAVPPDESKRAATRVPT--ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCCcccCHHHHHHHHHhccC--CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 9999883 44567777776 899999999999999999999999999985
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=221.88 Aligned_cols=238 Identities=18% Similarity=0.147 Sum_probs=153.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~ 120 (348)
++|+|||+||+++++..|.... ..+ ++|+|+++|+||||.|..+. ..+++++++|+.+++++++.++
T Consensus 1 ~~p~vvllHG~~~~~~~w~~~~-------~~l-~~~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~l~~~l~~~~~~~ 67 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQDWQPVG-------EAL-PDYPRLYIDLPGHGGSAAIS-----VDGFADVSRLLSQTLQSYNILP 67 (242)
T ss_pred CCCEEEEECCCCCChHHHHHHH-------HHc-CCCCEEEecCCCCCCCCCcc-----ccCHHHHHHHHHHHHHHcCCCC
Confidence 3678999999999987764332 344 47999999999999997542 2489999999999999999999
Q ss_pred eeEEEeChhHHHHHHHHHhCCCC-cceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCC
Q 018947 121 VMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQ 199 (348)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (348)
++++||||||.+++.+|.++|++ |++++++++...................+.. .+........+..++........
T Consensus 68 ~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 145 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQ-RFRQEPLEQVLADWYQQPVFASL- 145 (242)
T ss_pred eEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHH-HhccCcHHHHHHHHHhcchhhcc-
Confidence 99999999999999999999765 9999999876544332211111100000000 00000001222222221111100
Q ss_pred CCChHHHHHHHHHHhhhchhhHHHHHHHH--cCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEec
Q 018947 200 VPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQ 277 (348)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 277 (348)
.......+...............+... ....+..+.+.++++|+++|+|++|..+. .+.+.. + +++++++
T Consensus 146 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~---~~~~~~-~--~~~~~i~ 217 (242)
T PRK11126 146 --NAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ---ALAQQL-A--LPLHVIP 217 (242)
T ss_pred --CccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH---HHHHHh-c--CeEEEeC
Confidence 111122211111111111122222221 12245667788999999999999998652 233332 3 8999999
Q ss_pred CCCCCccccChhhhHHHHHHHHhh
Q 018947 278 ACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 278 ~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++||++++|+|+++++.|.+|+++
T Consensus 218 ~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 218 NAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CCCCchhhhChHHHHHHHHHHHhh
Confidence 999999999999999999999975
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=229.50 Aligned_cols=245 Identities=13% Similarity=0.116 Sum_probs=155.9
Q ss_pred eeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018947 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (348)
Q Consensus 31 ~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~ 110 (348)
.++|..+|+ +.|+|||+||+++++..|... ...+.++|+|+++|+||||.|... ..++++++++++.
T Consensus 3 ~~~y~~~G~-g~~~ivllHG~~~~~~~w~~~-------~~~L~~~~~vi~~Dl~G~G~S~~~-----~~~~~~~~~~~l~ 69 (256)
T PRK10349 3 NIWWQTKGQ-GNVHLVLLHGWGLNAEVWRCI-------DEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMAEAVL 69 (256)
T ss_pred ccchhhcCC-CCCeEEEECCCCCChhHHHHH-------HHHHhcCCEEEEecCCCCCCCCCC-----CCCCHHHHHHHHH
Confidence 367777782 335699999999998876432 355667899999999999998633 2478888887766
Q ss_pred HHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC---hHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 018947 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (348)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (348)
+ +..++++++||||||.+++.+|.++|++|+++|++++.+.... +.... .......... +.... .....
T Consensus 70 ~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~-~~~~~ 141 (256)
T PRK10349 70 Q----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIK-PDVLAGFQQQ--LSDDF-QRTVE 141 (256)
T ss_pred h----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCccc-HHHHHHHHHH--HHhch-HHHHH
Confidence 4 4568999999999999999999999999999999988644211 00000 0000000000 00000 11122
Q ss_pred hhhcccccCCCCCCChHHHHHHHHHHhhhchh---hHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHH
Q 018947 188 RYFSKEVRGNAQVPESDIVQACRRLLDERQSS---NVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHM 262 (348)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~ 262 (348)
.++........ . .......+.......... ........+ ...+..+.+.++++|+|+|+|++|.+++ ....+
T Consensus 142 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~ 218 (256)
T PRK10349 142 RFLALQTMGTE-T-ARQDARALKKTVLALPMPEVDVLNGGLEIL-KTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML 218 (256)
T ss_pred HHHHHHHccCc-h-HHHHHHHHHHHhhccCCCcHHHHHHHHHHH-HhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHH
Confidence 22211100000 0 011111111111111111 111111222 2246667888999999999999999883 44567
Q ss_pred HHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 263 TSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 263 ~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.+.+++ +++++++++||++++|+|++|++.|.+|-++
T Consensus 219 ~~~i~~--~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 219 DKLWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred HHhCCC--CeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 777887 9999999999999999999999999999765
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-31 Score=231.03 Aligned_cols=256 Identities=15% Similarity=0.208 Sum_probs=168.0
Q ss_pred ceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
.++..++.+++|...| ++++|||+||++++...|.... ..+.++|+|+++|+||||.|+.+ ...++.
T Consensus 69 ~~~~~~~~~i~Y~~~g--~g~~vvliHG~~~~~~~w~~~~-------~~l~~~~~v~~~D~~G~G~S~~~----~~~~~~ 135 (354)
T PLN02578 69 NFWTWRGHKIHYVVQG--EGLPIVLIHGFGASAFHWRYNI-------PELAKKYKVYALDLLGFGWSDKA----LIEYDA 135 (354)
T ss_pred eEEEECCEEEEEEEcC--CCCeEEEECCCCCCHHHHHHHH-------HHHhcCCEEEEECCCCCCCCCCc----ccccCH
Confidence 4455678899999988 5688999999999876664322 45567899999999999999855 245899
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH-----------HH---HHHHH
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-----------WL---YNKVM 168 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----------~~---~~~~~ 168 (348)
+++++++.++++.+..++++++|||+||++++.+|.++|++|+++|++++......... .. .....
T Consensus 136 ~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (354)
T PLN02578 136 MVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPL 215 (354)
T ss_pred HHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHH
Confidence 99999999999999989999999999999999999999999999999987653211000 00 00000
Q ss_pred HHHHHh---------hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHc---CCccHH
Q 018947 169 SNLLYY---------YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAIN---GRPDIS 235 (348)
Q Consensus 169 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~ 235 (348)
...... ....... .......+..... ......+.+....... ....+...+..+. ...+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T PLN02578 216 KEWFQRVVLGFLFWQAKQPSRI-ESVLKSVYKDKSN-----VDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLD 289 (354)
T ss_pred HHHHHHHHHHHHHHHhcCHHHH-HHHHHHhcCCccc-----CCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHH
Confidence 000000 0000000 0011111111000 0112222211110000 0111122222211 123455
Q ss_pred hhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 236 EGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 236 ~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+.+.++++|+++|+|++|.++ .....+.+.+++ .+++++ ++||+++.|+|+++++.|.+|++
T Consensus 290 ~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~--a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 290 SLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD--TTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 678899999999999999988 345567888877 888888 69999999999999999999986
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-31 Score=229.35 Aligned_cols=262 Identities=11% Similarity=0.050 Sum_probs=165.7
Q ss_pred eecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHH
Q 018947 25 IKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (348)
Q Consensus 25 v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 104 (348)
+..++.+++|...|+.++++|||+||++.+...|... ...+.++|+|+++|+||||.|+.+.......+++++
T Consensus 110 ~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~-------~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~ 182 (383)
T PLN03084 110 ASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKV-------LPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDE 182 (383)
T ss_pred EcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHH-------HHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHH
Confidence 4557779999999977789999999999998776432 355667999999999999999865322223689999
Q ss_pred HHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh-HHHHHHHHHHHHHHhhccchhHHH
Q 018947 105 LADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNLLYYYGMCGVVKE 183 (348)
Q Consensus 105 ~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 183 (348)
+++++.+++++++.++++|+|||+||++++.+|.++|++|+++|++++....... ..... ..+............. .
T Consensus 183 ~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l-~~~~~~l~~~~~~~~~-~ 260 (383)
T PLN03084 183 YVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTL-SEFSNFLLGEIFSQDP-L 260 (383)
T ss_pred HHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHH-HHHHHHHhhhhhhcch-H
Confidence 9999999999999999999999999999999999999999999999987543210 00000 0000000000000000 0
Q ss_pred HHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchh--hHHHHHHHHcCC-c----cHHhhh--ccCCccEEEEecCCCC
Q 018947 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSS--NVWHFLEAINGR-P----DISEGL--RKLQCRSLIFVGESSP 254 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~----~~~~~l--~~i~~Pvl~i~g~~D~ 254 (348)
......+.... . .....+....+...+...... ........+... . +....+ .++++|+++|+|++|.
T Consensus 261 ~~~~~~~~~~~-~--~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~ 337 (383)
T PLN03084 261 RASDKALTSCG-P--YAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDR 337 (383)
T ss_pred HHHhhhhcccC-c--cCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCC
Confidence 00001111000 0 000112222222111111100 011111111110 0 111111 3579999999999999
Q ss_pred CCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 255 FHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 255 ~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+++ ..+.+++. .+ .++++++++||++++|+|+++++.|.+||++
T Consensus 338 ~v~~~~~~~~a~~-~~--a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 338 WLNYDGVEDFCKS-SQ--HKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred CcCHHHHHHHHHh-cC--CeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 873 34445554 33 8999999999999999999999999999863
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=223.62 Aligned_cols=248 Identities=21% Similarity=0.321 Sum_probs=170.4
Q ss_pred eeEEEEccCC-CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018947 31 SLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (348)
Q Consensus 31 ~l~~~~~g~~-~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl 109 (348)
+++|...|++ ++|+|||+||++.+...|... ...+.++|+|+++|+||||.|..+ ...++++++++++
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~-------~~~l~~~~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~~ 69 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPV-------LPALTPDFRVLRYDKRGHGLSDAP----EGPYSIEDLADDV 69 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHH-------HHHhhcccEEEEecCCCCCCCCCC----CCCCCHHHHHHHH
Confidence 3677778865 678999999999887654321 355678999999999999998643 2457999999999
Q ss_pred HHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Q 018947 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (348)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (348)
.++++.++.++++++|||+||++++.+|.++|++|+++|++++.........+.... .. ......... ....+..+
T Consensus 70 ~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~-~~~~~~~~ 145 (251)
T TIGR02427 70 LALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARI--AA-VRAEGLAAL-ADAVLERW 145 (251)
T ss_pred HHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHH--hh-hhhccHHHH-HHHHHHHH
Confidence 999999999999999999999999999999999999999998765533222211110 00 001111111 12223333
Q ss_pred hcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhc
Q 018947 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKID 267 (348)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~ 267 (348)
+....... .....+.+...+.......+......+.. .+....+.++++|+++++|++|.+++ ....+.+.++
T Consensus 146 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 220 (251)
T TIGR02427 146 FTPGFREA----HPARLDLYRNMLVRQPPDGYAGCCAAIRD-ADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP 220 (251)
T ss_pred cccccccC----ChHHHHHHHHHHHhcCHHHHHHHHHHHhc-ccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC
Confidence 33222111 12222233333322232233322222222 45556778899999999999999983 3455777777
Q ss_pred cCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 268 RRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 268 ~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+ .++++++++||++++++|+++++.|.+|++
T Consensus 221 ~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 221 G--ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred C--ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 6 889999999999999999999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-31 Score=221.55 Aligned_cols=252 Identities=17% Similarity=0.246 Sum_probs=164.2
Q ss_pred eEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018947 32 LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (348)
Q Consensus 32 l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl 109 (348)
++|..+|+ .++|+|||+||+++++..|... ...+.++|+|+++|+||||.|..+. ...++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~-------~~~l~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~~ 70 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQ-------LDVLTQRFHVVTYDHRGTGRSPGEL---PPGYSIAHMADDV 70 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHH-------HHHHHhccEEEEEcCCCCCCCCCCC---cccCCHHHHHHHH
Confidence 46777886 4678999999999988655322 3556779999999999999997442 3458999999999
Q ss_pred HHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Q 018947 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (348)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (348)
.+++++++.++++++||||||++++.+|.++|++|+++|++++............ ......+......... .......
T Consensus 71 ~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~ 148 (257)
T TIGR03611 71 LQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCF-DVRIALLQHAGPEAYV-HAQALFL 148 (257)
T ss_pred HHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHH-HHHHHHHhccCcchhh-hhhhhhh
Confidence 9999999999999999999999999999999999999999997655432111110 0001111111110000 0000000
Q ss_pred hcccccCCCCCCChHHHHHHHHHHhh-hchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhh
Q 018947 190 FSKEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKI 266 (348)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~ 266 (348)
+........ .............. ............+.. .+....+.++++|+++++|++|.+++ ....+.+.+
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 224 (257)
T TIGR03611 149 YPADWISEN---AARLAADEAHALAHFPGKANVLRRINALEA-FDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL 224 (257)
T ss_pred ccccHhhcc---chhhhhhhhhcccccCccHHHHHHHHHHHc-CCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc
Confidence 000000000 00000000000000 011122222222222 34556788899999999999999983 445677777
Q ss_pred ccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 267 DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 267 ~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++ .+++.++++||++++++|+++++.|.+||++
T Consensus 225 ~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 225 PN--AQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CC--ceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 76 8899999999999999999999999999863
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-31 Score=221.77 Aligned_cols=242 Identities=13% Similarity=0.182 Sum_probs=156.3
Q ss_pred eEEEEc---cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018947 32 LSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (348)
Q Consensus 32 l~~~~~---g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d 108 (348)
++|+.+ +++++|+|||+||++++...|... ...+.++|+|+++|+||||.|..+ ..++++++++|
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~-------~~~l~~~~~vi~~D~~G~G~s~~~-----~~~~~~~~~~d 70 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVL-------ARDLVNDHDIIQVDMRNHGLSPRD-----PVMNYPAMAQD 70 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchhHHHHH-------HHHHhhCCeEEEECCCCCCCCCCC-----CCCCHHHHHHH
Confidence 455554 235778999999999987655322 355677899999999999998743 34799999999
Q ss_pred HHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHH-HHHHHHHHHHHhhccchhHHHHHHH
Q 018947 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW-LYNKVMSNLLYYYGMCGVVKELLLK 187 (348)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (348)
+.+++++++.++++++||||||.+++.+|.++|++|+++|++++.+........ ........ ....+.... . ...
T Consensus 71 ~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~-~~~ 146 (255)
T PRK10673 71 LLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINA-VSEAGATTR--Q-QAA 146 (255)
T ss_pred HHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHH-hhhcccccH--H-HHH
Confidence 999999999999999999999999999999999999999999865432111000 00000000 000011000 0 000
Q ss_pred hhhcccccCCCCCCChHHHHHHHHHHhhh----chhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHH
Q 018947 188 RYFSKEVRGNAQVPESDIVQACRRLLDER----QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 261 (348)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~ 261 (348)
..+..... ...........+... .............. .+.+..+++|+|+|+|++|..+ ...+.
T Consensus 147 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~l~i~G~~D~~~~~~~~~~ 216 (255)
T PRK10673 147 AIMRQHLN------EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVG----WEKIPAWPHPALFIRGGNSPYVTEAYRDD 216 (255)
T ss_pred HHHHHhcC------CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhC----CcccCCCCCCeEEEECCCCCCCCHHHHHH
Confidence 00000000 111111111111100 00001111111111 1235678999999999999988 34455
Q ss_pred HHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 262 MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+.+.+++ +++++++++||++++++|+++++.|.+||.+
T Consensus 217 ~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 217 LLAQFPQ--ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred HHHhCCC--cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 7788877 8999999999999999999999999999975
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=223.23 Aligned_cols=234 Identities=11% Similarity=0.086 Sum_probs=150.4
Q ss_pred eEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-Ccee
Q 018947 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-GAVM 122 (348)
Q Consensus 44 ~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v~ 122 (348)
+|||+||++.+...|.. .+..+.+++|+|+++|+||||.|+.+. ...++++++++|+.++++.++. ++++
T Consensus 5 ~vvllHG~~~~~~~w~~------~~~~L~~~~~~via~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~~~~~ 75 (255)
T PLN02965 5 HFVFVHGASHGAWCWYK------LATLLDAAGFKSTCVDLTGAGISLTDS---NTVSSSDQYNRPLFALLSDLPPDHKVI 75 (255)
T ss_pred EEEEECCCCCCcCcHHH------HHHHHhhCCceEEEecCCcCCCCCCCc---cccCCHHHHHHHHHHHHHhcCCCCCEE
Confidence 49999999988765542 223444789999999999999997431 2357899999999999999987 4999
Q ss_pred EEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC---hHHHHH-HHHHHHHHHh---hcc-ch----hHHHHHHHhhh
Q 018947 123 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLY-NKVMSNLLYY---YGM-CG----VVKELLLKRYF 190 (348)
Q Consensus 123 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~-~~~~~~~~~~---~~~-~~----~~~~~~~~~~~ 190 (348)
++||||||.+++.+|.++|++|+++|++++....+. ...... .......... ... .. .........++
T Consensus 76 lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
T PLN02965 76 LVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYY 155 (255)
T ss_pred EEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHH
Confidence 999999999999999999999999999998643221 111100 0000000000 000 00 00000000000
Q ss_pred cccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhcc
Q 018947 191 SKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDR 268 (348)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~ 268 (348)
.... ..+........+........ ... .+....+..+++|+++|+|++|.+++ ..+.+++.+++
T Consensus 156 ~~~~-------~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~ 221 (255)
T PLN02965 156 YNQS-------PLEDYTLSSKLLRPAPVRAF----QDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP 221 (255)
T ss_pred hcCC-------CHHHHHHHHHhcCCCCCcch----hhh---hhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc
Confidence 0000 01101111111110000000 000 11222455789999999999999983 45678889988
Q ss_pred CCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 269 RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 269 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+++++++++||++++|+|++|++.|.+|++.+
T Consensus 222 --a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 222 --AQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred --ceEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999876
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-31 Score=229.21 Aligned_cols=269 Identities=12% Similarity=0.124 Sum_probs=161.9
Q ss_pred cCCceeEEEEccCC---CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHH
Q 018947 27 TSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (348)
Q Consensus 27 ~~~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 103 (348)
.++.+++|...|+. +.|+||++||+++++..|.... .....+..++|+||++|+||||.|..+... ...++++
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~---~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~ 98 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLI---GPGRALDPEKYFIIIPNMFGNGLSSSPSNT-PAPFNAA 98 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhc---cCCCccCcCceEEEEecCCCCCCCCCCCCC-CCCCCCC
Confidence 35778999999852 3466777777776654331100 000133357899999999999999755221 1123332
Q ss_pred -----HHHHHHHH----HHHHcCCCce-eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHH
Q 018947 104 -----DLADQIAE----VLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (348)
Q Consensus 104 -----~~~~dl~~----~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (348)
.+++|+.+ ++++++++++ +||||||||++|+.+|.++|++|+++|++++..................+..
T Consensus 99 ~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 99 RFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTA 178 (339)
T ss_pred CCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHh
Confidence 24555544 7788999994 7999999999999999999999999999987765433222111111100000
Q ss_pred hhc-------------cchhHHHHHHHhhhcccccCC-----CCCCC-hHHHHHH-HHHHhhhchhhHHHHHHHHc----
Q 018947 174 YYG-------------MCGVVKELLLKRYFSKEVRGN-----AQVPE-SDIVQAC-RRLLDERQSSNVWHFLEAIN---- 229 (348)
Q Consensus 174 ~~~-------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~---- 229 (348)
... +.... ......++.+..... ..... .+..... ........+......+..+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 257 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHA-RVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDI 257 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHH-HHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhccc
Confidence 000 00000 001111111111000 00000 1111111 11112223233333322111
Q ss_pred -C----CccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecC-CCCCccccChhhhHHHHHHHHhh
Q 018947 230 -G----RPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQA-CGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 230 -~----~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
. ..+....+.++++|+|+|+|++|.+++ ....+++.+++ ++++++++ +||++++++|+++++.|.+||++
T Consensus 258 ~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~--a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 258 SRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN--AELRPIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred ccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CeEEEeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 1 125667888999999999999999883 45567888877 89999998 99999999999999999999998
Q ss_pred c
Q 018947 302 Y 302 (348)
Q Consensus 302 ~ 302 (348)
+
T Consensus 336 ~ 336 (339)
T PRK07581 336 L 336 (339)
T ss_pred H
Confidence 6
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-30 Score=228.38 Aligned_cols=277 Identities=13% Similarity=0.130 Sum_probs=173.0
Q ss_pred cCCceeEEEEccCC---CCCeEEEeCCCCCChhhhccc-------cccchhh---hhhccCCeEEEEeCCCCC-CCCCCC
Q 018947 27 TSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQG-------LFFCPEA---CSLLLHNFCIYHINPPGH-EFGAAA 92 (348)
Q Consensus 27 ~~~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~-------~~~~~~~---~~~~~~g~~vi~~D~~G~-G~S~~~ 92 (348)
.++.+++|..+|++ .+|+|||+||+++++..+... -+|...+ ..++.++|+||++|++|+ |.|..+
T Consensus 30 ~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 30 LPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCC
Confidence 35668999999953 368999999999998753211 0122221 145578999999999993 444322
Q ss_pred CCC----------CCCCCCHHHHHHHHHHHHHHcCCCc-eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH
Q 018947 93 ISD----------DEPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (348)
Q Consensus 93 ~~~----------~~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (348)
... ....++++++++++.++++++++++ ++++||||||++++.+|.++|++|+++|++++.........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 189 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNI 189 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHH
Confidence 110 1126899999999999999999999 48999999999999999999999999999998776443211
Q ss_pred HHHHHHHHHHHHhh----------ccchh--------------HHHHHHHhhhcccccCCCC---CCChHHHHHHH----
Q 018947 162 WLYNKVMSNLLYYY----------GMCGV--------------VKELLLKRYFSKEVRGNAQ---VPESDIVQACR---- 210 (348)
Q Consensus 162 ~~~~~~~~~~~~~~----------~~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---- 210 (348)
.............. +.... .....+...|......... .......+.+.
T Consensus 190 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~ 269 (379)
T PRK00175 190 AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQG 269 (379)
T ss_pred HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHH
Confidence 11000000000000 00000 0011111222222111000 00001111111
Q ss_pred -HHHhhhchhhHHHHHHHHcCC-------ccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCC--cEEEEec-
Q 018947 211 -RLLDERQSSNVWHFLEAINGR-------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRY--SALVEVQ- 277 (348)
Q Consensus 211 -~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~--~~~~~~~- 277 (348)
......+...+......+... .+..+.+.+|++|+|+|+|++|.++ ...+.+++.+++.+ +++++++
T Consensus 270 ~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~ 349 (379)
T PRK00175 270 DKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDS 349 (379)
T ss_pred HHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 112222333333322222111 2467889999999999999999987 35556888898722 2677775
Q ss_pred CCCCCccccChhhhHHHHHHHHhhcc
Q 018947 278 ACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 278 ~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
++||++++|+|+++++.|.+||++..
T Consensus 350 ~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 350 PYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred CCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 89999999999999999999999864
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.5e-31 Score=227.84 Aligned_cols=276 Identities=12% Similarity=0.111 Sum_probs=169.0
Q ss_pred CCccceeecCCceeEEEEccC-CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC--
Q 018947 19 SGKDNLIKTSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-- 95 (348)
Q Consensus 19 ~~~~~~v~~~~~~l~~~~~g~-~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~-- 95 (348)
..+..++..+|.+++|..+++ ..+++||++||++.+...|. ..+..+.+.||+|+++|+||||.|+.+...
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~------~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 103 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYA------ELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPH 103 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHH------HHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCC
Confidence 334555666888999999875 35679999999988765443 222456788999999999999999754221
Q ss_pred CCCCCCHHHHHHHHHHHHHHc----CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh-HHHHHHHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSN 170 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~ 170 (348)
.....+++++++|+..+++.+ +..+++++||||||.+++.+|.++|++|+++|+++|....... ......... .
T Consensus 104 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~-~ 182 (330)
T PRK10749 104 RGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRIL-N 182 (330)
T ss_pred cCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHH-H
Confidence 112358999999999999876 6679999999999999999999999999999999987543211 111101110 0
Q ss_pred HHHhh-ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhch-----hhHHHHHHHHcCCccHHhhhccCCcc
Q 018947 171 LLYYY-GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS-----SNVWHFLEAINGRPDISEGLRKLQCR 244 (348)
Q Consensus 171 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~i~~P 244 (348)
..... ...... ......+..............+....+.+....... ..+......+.........+.++++|
T Consensus 183 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 261 (330)
T PRK10749 183 WAEGHPRIRDGY-AIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTP 261 (330)
T ss_pred HHHHhcCCCCcC-CCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCC
Confidence 00000 000000 000000111100000000112222222222221111 01111111111111234556789999
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhcc-----CCcEEEEecCCCCCccccCh---hhhHHHHHHHHhhc
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDR-----RYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMGY 302 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~~ 302 (348)
+|+|+|++|.+++ ....+++.+++ .++++++++++||.++.|.+ +.+.+.|.+||++.
T Consensus 262 ~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 262 LLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999999983 44456666642 23689999999999999876 66888899999764
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-30 Score=226.55 Aligned_cols=271 Identities=13% Similarity=0.193 Sum_probs=168.9
Q ss_pred cCCceeEEEEccC---CCCCeEEEeCCCCCChhhh-ccc----cccchhh---hhhccCCeEEEEeCCCC--CCCCCCCC
Q 018947 27 TSHGSLSVTIYGD---QDKPALVTYPDLALNYMSC-FQG----LFFCPEA---CSLLLHNFCIYHINPPG--HEFGAAAI 93 (348)
Q Consensus 27 ~~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~-~~~----~~~~~~~---~~~~~~g~~vi~~D~~G--~G~S~~~~ 93 (348)
.++.+++|..+|+ ..+++|||+||+++++... +.. -+|...+ ..++.++|+||++|+|| ||.|....
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC
Confidence 4677899999995 3468999999999976431 000 0121121 25567899999999999 56554210
Q ss_pred --CC------CCCCCCHHHHHHHHHHHHHHcCCCc-eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHH
Q 018947 94 --SD------DEPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (348)
Q Consensus 94 --~~------~~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (348)
+. ....++++++++++.++++++++++ ++++||||||++++.+|.++|++|+++|++++......+.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFN 172 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHH
Confidence 00 1235899999999999999999998 99999999999999999999999999999998876554321110
Q ss_pred HHHHHHHHHhh-c-----cch-------h--H---------HHHHHHhhhcccccCCCCC----CChHHHHHHH-----H
Q 018947 165 NKVMSNLLYYY-G-----MCG-------V--V---------KELLLKRYFSKEVRGNAQV----PESDIVQACR-----R 211 (348)
Q Consensus 165 ~~~~~~~~~~~-~-----~~~-------~--~---------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~ 211 (348)
......+... . ... . . ....+..+|.......... ......+.+. .
T Consensus 173 -~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
T TIGR01392 173 -EVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDK 251 (351)
T ss_pred -HHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHH
Confidence 1000000000 0 000 0 0 0011122222211100000 0000111111 1
Q ss_pred HHhhhchhhHHHHHHHHcC------CccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEE-----EecC
Q 018947 212 LLDERQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALV-----EVQA 278 (348)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~-----~~~~ 278 (348)
.....+...+......+.. ..+..+.+.+|++|+|+|+|++|.++ ...+.+++.+++ .+++ ++++
T Consensus 252 ~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~--~~~~v~~~~i~~~ 329 (351)
T TIGR01392 252 FVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPA--AGLRVTYVEIESP 329 (351)
T ss_pred HHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhh--cCCceEEEEeCCC
Confidence 1222223333222222211 13456789999999999999999987 356678888987 4443 4578
Q ss_pred CCCCccccChhhhHHHHHHHHh
Q 018947 279 CGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 279 ~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+||++++|+|++|++.|.+||+
T Consensus 330 ~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 330 YGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCcchhhcCHHHHHHHHHHHhC
Confidence 9999999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-31 Score=231.87 Aligned_cols=261 Identities=14% Similarity=0.144 Sum_probs=163.3
Q ss_pred eeecCCceeEEEEccCC---CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 24 LIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
.+..+|.+++|..++++ .+++|||+||++++...++. .....+...||+|+++|+||||.|+.+. ....
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~-----~~~~~l~~~g~~v~~~D~~G~G~S~~~~---~~~~ 137 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFE-----GIARKIASSGYGVFAMDYPGFGLSEGLH---GYIP 137 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHH-----HHHHHHHhCCCEEEEecCCCCCCCCCCC---CCcC
Confidence 34457789999888753 45789999999887643322 2223455579999999999999997431 2235
Q ss_pred CHHHHHHHHHHHHHHcCC------CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh--HHHHHHHHHHHHH
Q 018947 101 SVDDLADQIAEVLNHFGL------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW--TEWLYNKVMSNLL 172 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~ 172 (348)
+++++++|+.++++.+.. .+++|+||||||++++.++.++|++|+++|+++|....... ..+..........
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~ 217 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLA 217 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHH
Confidence 899999999999987754 27999999999999999999999999999999987643211 0010000000000
Q ss_pred HhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHH-Hhh-hchhhHHHHHHHHcCCccHHhhhccCCccEEEEec
Q 018947 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRL-LDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 250 (348)
...... ..+.......... ........... ... .....+......+....+....+.++++|+|+|+|
T Consensus 218 ~~~p~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G 287 (349)
T PLN02385 218 NLLPKA---------KLVPQKDLAELAF-RDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHG 287 (349)
T ss_pred HHCCCc---------eecCCCccccccc-cCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEe
Confidence 000000 0000000000000 00000000000 000 00011111111111112445567889999999999
Q ss_pred CCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhh----hHHHHHHHHhhc
Q 018947 251 ESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA----MLIPMEYFLMGY 302 (348)
Q Consensus 251 ~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~~ 302 (348)
++|.+++ ..+.+.+.+..++.++++++++||.++.|+|++ +.+.|.+||++.
T Consensus 288 ~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 288 EADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred CCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 9999983 456677877655689999999999999999987 888899999875
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=225.15 Aligned_cols=267 Identities=13% Similarity=0.107 Sum_probs=160.8
Q ss_pred eeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhcc------ccccchhhh---hhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQ------GLFFCPEAC---SLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~------~~~~~~~~~---~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
...+++.+++|...|+.+.| +||+||+.+++..+.. ..+|.+.+. .+..++|+||++|+||||.|..
T Consensus 40 ~~~~~~~~l~y~~~G~~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~--- 115 (343)
T PRK08775 40 HAGLEDLRLRYELIGPAGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD--- 115 (343)
T ss_pred CCCCCCceEEEEEeccCCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---
Confidence 34457789999999954445 6666665555443110 002222222 2335789999999999997731
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCce-eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (348)
..++++++++|+.+++++++++++ +++||||||++++.+|.++|++|+++|++++........... .........
T Consensus 116 ---~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~-~~~~~~~~~ 191 (343)
T PRK08775 116 ---VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAW-RALQRRAVA 191 (343)
T ss_pred ---CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHH-HHHHHHHHH
Confidence 246889999999999999999775 799999999999999999999999999999876543221111 000000000
Q ss_pred hh---ccc----hhHHHH---------HHHhhhcccccCCCCCCChHHHHHHH----HHHhhhchhhHHHHHHHHcCCcc
Q 018947 174 YY---GMC----GVVKEL---------LLKRYFSKEVRGNAQVPESDIVQACR----RLLDERQSSNVWHFLEAINGRPD 233 (348)
Q Consensus 174 ~~---~~~----~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 233 (348)
.. +.. ...... .....+.................... ..........+.........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--- 268 (343)
T PRK08775 192 LGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL--- 268 (343)
T ss_pred cCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh---
Confidence 00 000 000000 00011111100000000011111111 11111222222222222111
Q ss_pred HHhhhccCCccEEEEecCCCCCCc--hHHHHHHhh-ccCCcEEEEecC-CCCCccccChhhhHHHHHHHHhhcc
Q 018947 234 ISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKI-DRRYSALVEVQA-CGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 234 ~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~-~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
....+.++++|+|+|+|++|.+++ ...++.+.+ ++ ++++++++ +||++++|+|++|++.|.+||++.+
T Consensus 269 ~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~--a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 269 HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPR--GSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCC--CeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 012367899999999999999884 455677777 45 89999985 9999999999999999999998875
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=216.94 Aligned_cols=262 Identities=18% Similarity=0.237 Sum_probs=164.0
Q ss_pred eeecCCceeEEEEccCC-CCCeEEEeCCCCCChhhhccccccchhhhhhccC-CeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 24 LIKTSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~-~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
++..+++.+.|...+.+ .+++|||+||++++...++..+ ..++.+ ||+|+++|+||||.|..+.. ....++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~------~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~ 78 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENL------RELLKEEGREVIMYDQLGCGYSDQPDD-SDELWT 78 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHH------HHHHHhcCCEEEEEcCCCCCCCCCCCc-cccccc
Confidence 56678888888887744 4789999999876655443222 455554 89999999999999875421 112478
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH--H----HHHHHhh
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV--M----SNLLYYY 175 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~----~~~~~~~ 175 (348)
++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++....+.......... + ...+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (288)
T TIGR01250 79 IDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRC 158 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987665432221110000 0 0000000
Q ss_pred ----ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHH--------HHHcCCccHHhhhccCCc
Q 018947 176 ----GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFL--------EAINGRPDISEGLRKLQC 243 (348)
Q Consensus 176 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~i~~ 243 (348)
.............+........ .. ........ ..... ......+ .......+....+.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 232 (288)
T TIGR01250 159 EASGDYDNPEYQEAVEVFYHHLLCRT-RK-WPEALKHL---KSGMN-TNVYNIMQGPNEFTITGNLKDWDITDKLSEIKV 232 (288)
T ss_pred HhccCcchHHHHHHHHHHHHHhhccc-cc-chHHHHHH---hhccC-HHHHhcccCCccccccccccccCHHHHhhccCC
Confidence 0000000000000000000000 00 00000000 00000 0000000 000011344566788999
Q ss_pred cEEEEecCCCCCC-chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 244 RSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 244 Pvl~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
|+++++|++|.+. .....+.+.+++ .++++++++||++++|+|+++++.|.+||+
T Consensus 233 P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 233 PTLLTVGEFDTMTPEAAREMQELIAG--SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CEEEEecCCCccCHHHHHHHHHhccC--CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 9999999999865 344557777776 889999999999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-29 Score=208.08 Aligned_cols=243 Identities=21% Similarity=0.266 Sum_probs=157.6
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHcCCCc
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ-IAEVLNHFGLGA 120 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d-l~~~l~~l~~~~ 120 (348)
+|+|||+||++++...|... ...+.+||+|+++|+||||.|..+ .....+++++++++ +..+++.++.++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~-------~~~L~~~~~v~~~d~~g~G~s~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQAL-------IELLGPHFRCLAIDLPGHGSSQSP--DEIERYDFEEAAQDILATLLDQLGIEP 71 (251)
T ss_pred CCEEEEEcCCCCchhhHHHH-------HHHhcccCeEEEEcCCCCCCCCCC--CccChhhHHHHHHHHHHHHHHHcCCCe
Confidence 47899999999988765322 244458999999999999999754 22356789999999 888889998899
Q ss_pred eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH----HHHHHHHhhccchhHHHHHHHhhhcccccC
Q 018947 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK----VMSNLLYYYGMCGVVKELLLKRYFSKEVRG 196 (348)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (348)
++++|||+||.+++.+|.++|++|++++++++.............. .....+....... ....++......
T Consensus 72 ~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 146 (251)
T TIGR03695 72 FFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEA-----FLDDWYQQPLFA 146 (251)
T ss_pred EEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccH-----HHHHHhcCceee
Confidence 9999999999999999999999999999999876543222111100 0111111111111 112121111110
Q ss_pred CCCCCChHHHHHHHHHHhhhchhhHHHHHHHH--cCCccHHhhhccCCccEEEEecCCCCCC-chHHHHHHhhccCCcEE
Q 018947 197 NAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSAL 273 (348)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~g~~D~~~-~~~~~~~~~~~~~~~~~ 273 (348)
............+...............+... ....+....+.++++|+++++|++|..+ ...+.+.+.+++ .++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~ 224 (251)
T TIGR03695 147 SQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQIAKEMQKLLPN--LTL 224 (251)
T ss_pred ecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHHHHHHHHhcCCC--CcE
Confidence 00000122222222221112222222222211 1223445567789999999999999876 344456666665 899
Q ss_pred EEecCCCCCccccChhhhHHHHHHHHh
Q 018947 274 VEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 274 ~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
++++++||++++++|+++++.|.+|++
T Consensus 225 ~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 225 VIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred EEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 999999999999999999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=213.36 Aligned_cols=255 Identities=12% Similarity=0.105 Sum_probs=155.9
Q ss_pred eeecCCceeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 24 LIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
++..+|.+++|..+-+ ..++.|+++||++.+...|.. .+..+...||+|+++|+||||.|... .....+
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~------~~~~l~~~g~~via~D~~G~G~S~~~---~~~~~~ 75 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEE------LAENISSLGILVFSHDHIGHGRSNGE---KMMIDD 75 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHH------HHHHHHhCCCEEEEccCCCCCCCCCc---cCCcCC
Confidence 4566888899987754 345667777999988765532 22455567999999999999998642 122346
Q ss_pred HHHHHHHHHHHHHHc----CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 102 VDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
+.++++|+.+.++.+ ...+++++||||||.+++.+|.++|++|+++|+++|.......... ..+.........
T Consensus 76 ~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~---~~~~~~~~~~~~ 152 (276)
T PHA02857 76 FGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRL---NLLAAKLMGIFY 152 (276)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHH---HHHHHHHHHHhC
Confidence 677777777777543 3468999999999999999999999999999999986553211000 000000000000
Q ss_pred chhHHHHHHHhhhcccccCCCCCCChHHHHHHHH-HHhhhc--hhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRR-LLDERQ--SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
... .... +.+.... ........+.. ...... ...+....... ..+....+.++++|+|+++|++|.
T Consensus 153 ~~~----~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvliv~G~~D~ 221 (276)
T PHA02857 153 PNK----IVGK-LCPESVS----RDMDEVYKYQYDPLVNHEKIKAGFASQVLKA--TNKVRKIIPKIKTPILILQGTNNE 221 (276)
T ss_pred CCC----ccCC-CCHhhcc----CCHHHHHHHhcCCCccCCCccHHHHHHHHHH--HHHHHHhcccCCCCEEEEecCCCC
Confidence 000 0000 0000000 00000000000 000000 00011111111 123445678899999999999999
Q ss_pred CC--chHHHHHHhhccCCcEEEEecCCCCCccccCh---hhhHHHHHHHHhhc
Q 018947 255 FH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMGY 302 (348)
Q Consensus 255 ~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~~ 302 (348)
++ .....+.+.+.. +.++++++++||.++.|++ +++.+.|.+||++.
T Consensus 222 i~~~~~~~~l~~~~~~-~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 222 ISDVSGAYYFMQHANC-NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cCChHHHHHHHHHccC-CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 98 355567776643 4899999999999999866 57889999999874
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-29 Score=206.90 Aligned_cols=230 Identities=16% Similarity=0.117 Sum_probs=148.5
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCce
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v 121 (348)
+|+|||+||++++...|... ...+.++|+|+++|+||||.|... ..++++++++++.+.++ +++
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~-------~~~l~~~~~vi~~d~~G~G~s~~~-----~~~~~~~~~~~~~~~~~----~~~ 67 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCL-------DEELSAHFTLHLVDLPGHGRSRGF-----GPLSLADAAEAIAAQAP----DPA 67 (245)
T ss_pred CceEEEEcCCCCchhhHHHH-------HHhhccCeEEEEecCCcCccCCCC-----CCcCHHHHHHHHHHhCC----CCe
Confidence 47899999999988765322 355667899999999999998643 34678888888776543 689
Q ss_pred eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC---hH----HHHHHHHHHHHHHhhccchhHHHHHHHhhhcccc
Q 018947 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WT----EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEV 194 (348)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (348)
+++||||||.+++.+|.++|++|+++|++++...... +. .... ..+...+. ...............+....
T Consensus 68 ~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 145 (245)
T TIGR01738 68 IWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVL-TGFQQQLS-DDYQRTIERFLALQTLGTPT 145 (245)
T ss_pred EEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHH-HHHHHHhh-hhHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999987654321 11 0000 00000000 00000000000001111110
Q ss_pred cCCCCCCChHHHHHHHHHHhhhc---hhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccC
Q 018947 195 RGNAQVPESDIVQACRRLLDERQ---SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRR 269 (348)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~ 269 (348)
.......+...+.... ...+...+..+ ...+....+.++++|+++++|++|.+++ ..+.+.+.+++
T Consensus 146 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~- 216 (245)
T TIGR01738 146 -------ARQDARALKQTLLARPTPNVQVLQAGLEIL-ATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH- 216 (245)
T ss_pred -------cchHHHHHHHHhhccCCCCHHHHHHHHHHh-hcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC-
Confidence 1111122222211111 11222223222 2245667788999999999999999883 44557777876
Q ss_pred CcEEEEecCCCCCccccChhhhHHHHHHHH
Q 018947 270 YSALVEVQACGSMVTEEQPHAMLIPMEYFL 299 (348)
Q Consensus 270 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 299 (348)
+++++++++||++++|+|+++++.|.+|+
T Consensus 217 -~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 217 -SELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred -CeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 89999999999999999999999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-29 Score=214.56 Aligned_cols=267 Identities=16% Similarity=0.230 Sum_probs=166.7
Q ss_pred ceeecCCc--eeEEEEccCC---------CCCeEEEeCCCCCChhhhccccccchhhhhhccC--CeEEEEeCCCCCCCC
Q 018947 23 NLIKTSHG--SLSVTIYGDQ---------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFG 89 (348)
Q Consensus 23 ~~v~~~~~--~l~~~~~g~~---------~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~--g~~vi~~D~~G~G~S 89 (348)
..++...+ .+.....|+. ++++||++||++++...|.... ..+.+ |++|+++|++|+|.+
T Consensus 28 ~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~-------~~L~~~~~~~v~aiDl~G~g~~ 100 (326)
T KOG1454|consen 28 TSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVV-------PLLSKAKGLRVLAIDLPGHGYS 100 (326)
T ss_pred eEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhc-------cccccccceEEEEEecCCCCcC
Confidence 34445455 5666666554 6899999999999887776555 34443 499999999999954
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEE---EecCCCCCCChHHHHHHH
Q 018947 90 AAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLI---LVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~~~ 166 (348)
+.. +....|+..++++.+..++......+++++|||+||.+|+.+|+.+|+.|+++| ++++..............
T Consensus 101 s~~--~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~ 178 (326)
T KOG1454|consen 101 SPL--PRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRR 178 (326)
T ss_pred CCC--CCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHH
Confidence 432 223459999999999999999999999999999999999999999999999999 555555543333222222
Q ss_pred HHHHHHHhhc-cchhH---HHH-HHHhhhcccccCCCCCCChHHHHHHHHHHhhh-----chhhHHHHHHHHc-CCccHH
Q 018947 167 VMSNLLYYYG-MCGVV---KEL-LLKRYFSKEVRGNAQVPESDIVQACRRLLDER-----QSSNVWHFLEAIN-GRPDIS 235 (348)
Q Consensus 167 ~~~~~~~~~~-~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~ 235 (348)
.......... ..... ... +............ .......+.....+... ..+....++.... ......
T Consensus 179 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T KOG1454|consen 179 LLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVY--TDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLL 256 (326)
T ss_pred hhhhhccHhhhcCccccccchhheeHhhhcceeeec--cccccchhhhhhheecccccchhhhheeeEEEeccCccchHH
Confidence 2211111100 00000 000 0000000000000 00111111111111110 0000001111110 012333
Q ss_pred hhhccCC-ccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 236 EGLRKLQ-CRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 236 ~~l~~i~-~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
..+.++. ||+|+++|++|+++ +.+..+.+.+++ +++++++++||.+++|.|+++++.|..|+++.
T Consensus 257 ~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn--~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 257 SLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPN--AELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred HhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCC--ceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 4566776 99999999999999 346678888876 99999999999999999999999999999875
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-28 Score=214.30 Aligned_cols=263 Identities=11% Similarity=0.104 Sum_probs=159.0
Q ss_pred ccceeec-CCceeEEEEccCC----CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~~----~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
+..++.. +|.+++|+.++++ .+++|||+||++.+. .|. +......+..+||+|+++|+||||.|....
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~-~~~----~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~-- 105 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDI-SWT----FQSTAIFLAQMGFACFALDLEGHGRSEGLR-- 105 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCc-cee----hhHHHHHHHhCCCEEEEecCCCCCCCCCcc--
Confidence 3444444 7778999877532 356799999998664 221 111123455679999999999999986431
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCC------CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH--HHHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVLNHFGL------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWLYNKV 167 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~ 167 (348)
....+++++++|+.++++.+.. .+++|+||||||++++.++.++|++|+++|++++........ .+....
T Consensus 106 -~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~- 183 (330)
T PLN02298 106 -AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQ- 183 (330)
T ss_pred -ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHH-
Confidence 2246889999999999987753 369999999999999999999999999999999876432210 010000
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCC-CCCChHHHHHHHHH-Hhhhc-hhhHHHHHHHHcCCccHHhhhccCCcc
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNA-QVPESDIVQACRRL-LDERQ-SSNVWHFLEAINGRPDISEGLRKLQCR 244 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~P 244 (348)
....... .............. ..........+... ..... ....................+.++++|
T Consensus 184 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 253 (330)
T PLN02298 184 ILTFVAR----------FLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIP 253 (330)
T ss_pred HHHHHHH----------HCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCC
Confidence 0000000 00000000000000 00000000000000 00000 000000011110001234567889999
Q ss_pred EEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChh----hhHHHHHHHHhhc
Q 018947 245 SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH----AMLIPMEYFLMGY 302 (348)
Q Consensus 245 vl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~fl~~~ 302 (348)
+|+|+|++|.++ ...+.+.+.++.+++++++++++||.++.++|+ ++.+.|.+||.+.
T Consensus 254 vLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 254 FIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred EEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999 345567777765558999999999999998886 4677888999887
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=206.96 Aligned_cols=224 Identities=22% Similarity=0.330 Sum_probs=148.2
Q ss_pred EEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEE
Q 018947 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124 (348)
Q Consensus 45 vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 124 (348)
|||+||++++...|.. . ...+++||+|+++|+||||.|..+.. ...++++++++|+.+++++++.++++++
T Consensus 1 vv~~hG~~~~~~~~~~------~-~~~l~~~~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~lv 71 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDP------L-AEALARGYRVIAFDLPGHGRSDPPPD--YSPYSIEDYAEDLAELLDALGIKKVILV 71 (228)
T ss_dssp EEEE-STTTTGGGGHH------H-HHHHHTTSEEEEEECTTSTTSSSHSS--GSGGSHHHHHHHHHHHHHHTTTSSEEEE
T ss_pred eEEECCCCCCHHHHHH------H-HHHHhCCCEEEEEecCCccccccccc--cCCcchhhhhhhhhhccccccccccccc
Confidence 7999999999866542 2 24446899999999999999985521 3468999999999999999999999999
Q ss_pred EeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH-HHHHHHHHHHHHHhh-ccchhHHHHHHHhhhcccccCCCCCCC
Q 018947 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT-EWLYNKVMSNLLYYY-GMCGVVKELLLKRYFSKEVRGNAQVPE 202 (348)
Q Consensus 125 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (348)
|||+||.+++.++.++|++|+++|++++........ .......+....... .............++. .
T Consensus 72 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 141 (228)
T PF12697_consen 72 GHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFD----------G 141 (228)
T ss_dssp EETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------H
T ss_pred ccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccc----------c
Confidence 999999999999999999999999999988643221 000001111111000 0000000111111111 0
Q ss_pred hHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCC
Q 018947 203 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACG 280 (348)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~g 280 (348)
....+.+.. ....+...+.......+....+.++++|+++++|++|.++ ...+.+.+.+++ +++++++++|
T Consensus 142 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~g 214 (228)
T PF12697_consen 142 DEPEDLIRS-----SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN--AELVVIPGAG 214 (228)
T ss_dssp HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT--EEEEEETTSS
T ss_pred ccccccccc-----cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC--CEEEEECCCC
Confidence 111111110 1112222222100113455677889999999999999998 345567777776 9999999999
Q ss_pred CCccccChhhhHHH
Q 018947 281 SMVTEEQPHAMLIP 294 (348)
Q Consensus 281 H~~~~e~p~~~~~~ 294 (348)
|++++|+|++++++
T Consensus 215 H~~~~~~p~~~~~a 228 (228)
T PF12697_consen 215 HFLFLEQPDEVAEA 228 (228)
T ss_dssp STHHHHSHHHHHHH
T ss_pred CccHHHCHHHHhcC
Confidence 99999999999874
|
... |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=211.70 Aligned_cols=266 Identities=16% Similarity=0.168 Sum_probs=156.9
Q ss_pred eeEEEEc-cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC-CCCHHHHHHH
Q 018947 31 SLSVTIY-GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP-VLSVDDLADQ 108 (348)
Q Consensus 31 ~l~~~~~-g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~-~~~~~~~~~d 108 (348)
.+.+... +++++|+|||+||++.+...|.... ..+.++|+|+++|+||||.|+.+...... ....+.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~-------~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 165 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNF-------DALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDS 165 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHH-------HHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHH
Confidence 4544433 4457799999999998876554322 34456799999999999999754211000 1112346778
Q ss_pred HHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHH---HHH------HHHHHHH-------
Q 018947 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW---LYN------KVMSNLL------- 172 (348)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~------~~~~~~~------- 172 (348)
+.++++.++.++++++||||||.+++.+|.++|++|+++|++++.........+ ... ..+....
T Consensus 166 i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 245 (402)
T PLN02894 166 FEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTP 245 (402)
T ss_pred HHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCH
Confidence 888888899999999999999999999999999999999999987654321111 100 0000000
Q ss_pred ----Hhhcc-chhHHHHHHHhhhcccccCC-CCCCC-hHHHHHHHHHHhhh-chhhHHHHHHHH--cCCccHHhhhccCC
Q 018947 173 ----YYYGM-CGVVKELLLKRYFSKEVRGN-AQVPE-SDIVQACRRLLDER-QSSNVWHFLEAI--NGRPDISEGLRKLQ 242 (348)
Q Consensus 173 ----~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~i~ 242 (348)
...+. ............+....... ..... ..+.+.+....... ........+... ....+....+.+++
T Consensus 246 ~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 325 (402)
T PLN02894 246 QKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWK 325 (402)
T ss_pred HHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCC
Confidence 00000 00000111111121111000 00001 11111111111111 111111111111 11235556688899
Q ss_pred ccEEEEecCCCCCCc-hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhccc
Q 018947 243 CRSLIFVGESSPFHS-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 304 (348)
Q Consensus 243 ~Pvl~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 304 (348)
+|+++|+|++|.+.+ ....+.+..+ ..+++++++++||++++|+|++|++.|.+|++.+..
T Consensus 326 vP~liI~G~~D~i~~~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~ 387 (402)
T PLN02894 326 VPTTFIYGRHDWMNYEGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLS 387 (402)
T ss_pred CCEEEEEeCCCCCCcHHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhcc
Confidence 999999999998773 3444555443 237899999999999999999999999999998743
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-28 Score=243.84 Aligned_cols=263 Identities=18% Similarity=0.249 Sum_probs=171.5
Q ss_pred eEEEEccC-CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC----CCCCCCCHHHHH
Q 018947 32 LSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS----DDEPVLSVDDLA 106 (348)
Q Consensus 32 l~~~~~g~-~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~ 106 (348)
++|...|+ +.+++|||+||++++...|... ...+.++|+|+++|+||||.|..... .....+++++++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~-------~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a 1432 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPI-------MKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVA 1432 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHH-------HHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHH
Confidence 34445564 3568999999999998876422 24556789999999999999864311 012357899999
Q ss_pred HHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHH
Q 018947 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186 (348)
Q Consensus 107 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (348)
+++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.........+............ .+.......+.
T Consensus 1433 ~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~ 1511 (1655)
T PLN02980 1433 DLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRAR-MLIDHGLEIFL 1511 (1655)
T ss_pred HHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHH-HHHhhhHHHHH
Confidence 99999999999999999999999999999999999999999999876543322111111100000000 00000012233
Q ss_pred HhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHc--CCccHHhhhccCCccEEEEecCCCCCCc-hHHHHH
Q 018947 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFHS-EAVHMT 263 (348)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvl~i~g~~D~~~~-~~~~~~ 263 (348)
..|+......... ..+...+.+...+...........+..+. ...+..+.+.++++|+|+|+|++|..++ ...++.
T Consensus 1512 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~~a~~~~ 1590 (1655)
T PLN02980 1512 ENWYSGELWKSLR-NHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQIAQKMY 1590 (1655)
T ss_pred HHhccHHHhhhhc-cCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHHHHHHHH
Confidence 3343322111000 02222222222222222223333333221 2345667799999999999999999873 345677
Q ss_pred HhhccC----------CcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 264 SKIDRR----------YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 264 ~~~~~~----------~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
+.+++. .+++++++++||++++|+|+++++.|.+||++..
T Consensus 1591 ~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1591 REIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred HHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 766652 2589999999999999999999999999999874
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-28 Score=213.88 Aligned_cols=254 Identities=16% Similarity=0.185 Sum_probs=165.7
Q ss_pred ceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
..+...+.+++|...|++++++|||+||++++...|... ...+..+|+|+++|+||||.|... ....++
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~-------~~~l~~~~~v~~~d~~g~G~s~~~----~~~~~~ 180 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFN-------HAALAAGRPVIALDLPGHGASSKA----VGAGSL 180 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHH-------HHHHhcCCEEEEEcCCCCCCCCCC----CCCCCH
Confidence 445667778999888877789999999999988766422 245566799999999999998533 235789
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHH
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (348)
+++++++.++++.++..+++++|||+||.+++.+|.++|++++++|++++.............. + ... ......
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~-~---~~~-~~~~~~- 254 (371)
T PRK14875 181 DELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDG-F---VAA-ESRREL- 254 (371)
T ss_pred HHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHH-h---hcc-cchhHH-
Confidence 9999999999999999999999999999999999999999999999998865433211111000 0 000 000000
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHH----cCCccHHhhhccCCccEEEEecCCCCCCc
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAI----NGRPDISEGLRKLQCRSLIFVGESSPFHS 257 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~ 257 (348)
...+...+..... ................. ...+....... ....+....+.++++|+++++|++|.+++
T Consensus 255 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp 329 (371)
T PRK14875 255 KPVLELLFADPAL-----VTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIP 329 (371)
T ss_pred HHHHHHHhcChhh-----CCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccC
Confidence 1111111111100 01112111111111000 00111111111 11234455677899999999999999884
Q ss_pred hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 258 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
... .+.+.. ..++.+++++||++++++|+++++.|.+||++
T Consensus 330 ~~~--~~~l~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 330 AAH--AQGLPD-GVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred HHH--HhhccC-CCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 322 222322 38899999999999999999999999999975
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=202.36 Aligned_cols=253 Identities=8% Similarity=0.069 Sum_probs=153.0
Q ss_pred CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018947 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
+|-+++|..- ++++|+|||+||++.+...|. .....+...||+|+++|+||||.|... ....++++++++
T Consensus 5 ~~~~~~~~~~-~~~~p~vvliHG~~~~~~~w~------~~~~~L~~~g~~vi~~dl~g~G~s~~~---~~~~~~~~~~~~ 74 (273)
T PLN02211 5 NGEEVTDMKP-NRQPPHFVLIHGISGGSWCWY------KIRCLMENSGYKVTCIDLKSAGIDQSD---ADSVTTFDEYNK 74 (273)
T ss_pred cccccccccc-cCCCCeEEEECCCCCCcCcHH------HHHHHHHhCCCEEEEecccCCCCCCCC---cccCCCHHHHHH
Confidence 5566766653 256789999999998876543 222344457999999999999987432 123489999999
Q ss_pred HHHHHHHHcC-CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHH-HHHHHHHHHhhccchhHHHHH
Q 018947 108 QIAEVLNHFG-LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-NKVMSNLLYYYGMCGVVKELL 185 (348)
Q Consensus 108 dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 185 (348)
++.+++++++ .++++|+||||||+++..++.++|++|+++|++++............ ................
T Consensus 75 ~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----- 149 (273)
T PLN02211 75 PLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYEL----- 149 (273)
T ss_pred HHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceee-----
Confidence 9999999985 58999999999999999999999999999999987644222111100 0000000000000000
Q ss_pred HHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHH--------HcCCccHHhhhccC-CccEEEEecCCCCCC
Q 018947 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA--------INGRPDISEGLRKL-QCRSLIFVGESSPFH 256 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~i-~~Pvl~i~g~~D~~~ 256 (348)
...+.............+.... .+....+......... .....+..+...++ ++|+++|.|++|..+
T Consensus 150 -~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~i 225 (273)
T PLN02211 150 -GFGLGPDQPPTSAIIKKEFRRK---ILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVV 225 (273)
T ss_pred -eeccCCCCCCceeeeCHHHHHH---HHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCC
Confidence 0000000000000000011100 0000011100110000 00111222223345 789999999999998
Q ss_pred c--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 257 S--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 257 ~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+ ..+.+.+.++. .+++.++ +||.+++++|+++++.|.++....
T Consensus 226 p~~~~~~m~~~~~~--~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 226 KPEQQEAMIKRWPP--SQVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred CHHHHHHHHHhCCc--cEEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 3 45567887776 7899996 999999999999999999987664
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-27 Score=201.23 Aligned_cols=125 Identities=14% Similarity=0.071 Sum_probs=101.0
Q ss_pred ceeec-CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 23 ~~v~~-~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
.++.. ++.+++|...|++++++|||+||++++...+. . ...+...+|+|+++|+||||.|..+. ....++
T Consensus 7 ~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~~--~-----~~~~~~~~~~vi~~D~~G~G~S~~~~--~~~~~~ 77 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDPG--C-----RRFFDPETYRIVLFDQRGCGKSTPHA--CLEENT 77 (306)
T ss_pred CeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCHH--H-----HhccCccCCEEEEECCCCCCCCCCCC--CcccCC
Confidence 45555 46789999999777889999999877654321 1 01233468999999999999997442 123468
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
.+++++|+..++++++.++++++||||||.+++.++.++|++|+++|++++....
T Consensus 78 ~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~ 132 (306)
T TIGR01249 78 TWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLR 132 (306)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCC
Confidence 8999999999999999999999999999999999999999999999999887654
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=201.04 Aligned_cols=270 Identities=13% Similarity=0.185 Sum_probs=171.9
Q ss_pred CceeEEEEccC---CCCCeEEEeCCCCCChh------------hhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC-
Q 018947 29 HGSLSVTIYGD---QDKPALVTYPDLALNYM------------SCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA- 92 (348)
Q Consensus 29 ~~~l~~~~~g~---~~~p~vvllHG~~~~~~------------~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~- 92 (348)
..++.|.++|. .+.++||++|++.+++. +|+..+.- .-..+-.+.|.||++|..|-|.|..|
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG--~g~~lDt~~yfvi~~n~lG~~~~~~p~ 117 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIG--PGKAIDTNKYFVISTDTLCNVQVKDPN 117 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccC--CCCCcCCCceEEEEecccCCCcCCCCC
Confidence 44789999996 24589999999988652 23222211 11223346799999999998753322
Q ss_pred ------C---C-------CCCCCCCHHHHHHHHHHHHHHcCCCcee-EEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 93 ------I---S-------DDEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 93 ------~---~-------~~~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
. + .....++++++++++..+++++++++++ ++||||||++++.+|.++|++|+++|++++...
T Consensus 118 ~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 118 VITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 0 1 1245689999999999999999999986 999999999999999999999999999998877
Q ss_pred CCChH-HHHHHHHHHHHHHh---------------hccchhHHHHHH-----HhhhcccccCCC-CCCC-------hHHH
Q 018947 156 APSWT-EWLYNKVMSNLLYY---------------YGMCGVVKELLL-----KRYFSKEVRGNA-QVPE-------SDIV 206 (348)
Q Consensus 156 ~~~~~-~~~~~~~~~~~~~~---------------~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~-------~~~~ 206 (348)
...+. ..........+... .++... ..... ..++...+.... .... ....
T Consensus 198 ~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a-~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~ 276 (389)
T PRK06765 198 NDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLA-LRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSF 276 (389)
T ss_pred CChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHH-HHHHHHHcCCHHHHHHHcCcCccccccccccccchhhH
Confidence 65553 21111111111000 000000 00000 111111111100 0000 0011
Q ss_pred HHHHH-----HHhhhchhhHHHHHHHHcCC------ccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhcc--CCc
Q 018947 207 QACRR-----LLDERQSSNVWHFLEAINGR------PDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDR--RYS 271 (348)
Q Consensus 207 ~~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~--~~~ 271 (348)
+.+.. .....++..+....+.+... .+..+.+.++++|+|+|+|++|.+++ ..+++.+.+++ +++
T Consensus 277 e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a 356 (389)
T PRK06765 277 EKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYA 356 (389)
T ss_pred HHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCe
Confidence 12211 12223444455444443221 25677889999999999999999883 44567888863 248
Q ss_pred EEEEecC-CCCCccccChhhhHHHHHHHHhh
Q 018947 272 ALVEVQA-CGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 272 ~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+++++++ +||+.++++|+++++.|.+||++
T Consensus 357 ~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 357 EVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 8999985 99999999999999999999975
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-27 Score=219.76 Aligned_cols=267 Identities=15% Similarity=0.124 Sum_probs=155.8
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
++.++..++.+++|..+|++++|+|||+||++++...|... ...+.++|+|+++|+||||.|..+.. ...+
T Consensus 4 ~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~-------~~~L~~~~~Vi~~D~~G~G~S~~~~~--~~~~ 74 (582)
T PRK05855 4 RRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGV-------APLLADRFRVVAYDVRGAGRSSAPKR--TAAY 74 (582)
T ss_pred eEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHH-------HHHhhcceEEEEecCCCCCCCCCCCc--cccc
Confidence 35566778899999999987789999999999888765432 24557899999999999999975422 2368
Q ss_pred CHHHHHHHHHHHHHHcCCCc-eeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 101 SVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
+++++++|+.+++++++..+ ++|+||||||.+++.++.+ .++++..++.++..... ....+... .... ......
T Consensus 75 ~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~-~~~~-~~~~~~ 151 (582)
T PRK05855 75 TLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLD-HVGFWLRS-GLRR-PTPRRL 151 (582)
T ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchH-HHHHHHhh-cccc-cchhhh
Confidence 99999999999999998765 9999999999999988766 24455555554432210 00000000 0000 000000
Q ss_pred chhHHHHHHHhh----hcccccCCC--CCCChHHHHHHHHHHhhhc-------------hhhHHHHHHHHcCCccHHhhh
Q 018947 178 CGVVKELLLKRY----FSKEVRGNA--QVPESDIVQACRRLLDERQ-------------SSNVWHFLEAINGRPDISEGL 238 (348)
Q Consensus 178 ~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~l 238 (348)
.... ......+ +........ ............+...... ......+...... ......+
T Consensus 152 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 229 (582)
T PRK05855 152 ARAL-GQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIR-SLSRPRE 229 (582)
T ss_pred hHHH-HHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhh-hhccCcc
Confidence 0000 0000000 000000000 0000000000000000000 0001111110000 1111224
Q ss_pred ccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhccc
Q 018947 239 RKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGL 304 (348)
Q Consensus 239 ~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 304 (348)
..+++|+++|+|++|.+++ ....+.+.+++ .++++++ +||++++|+|+++++.|.+|+.+.+.
T Consensus 230 ~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 230 RYTDVPVQLIVPTGDPYVRPALYDDLSRWVPR--LWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred CCccCceEEEEeCCCcccCHHHhccccccCCc--ceEEEcc-CCCcchhhChhHHHHHHHHHHHhccC
Confidence 4589999999999999984 33345666665 7777775 89999999999999999999998753
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-26 Score=193.14 Aligned_cols=270 Identities=14% Similarity=0.107 Sum_probs=171.2
Q ss_pred ccceeecCCceeEEEEccCC--CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~--~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
+..+...++..++|..+-.. ...+||++||++.+..-+.. .+..+...||.|+++|+||||.|.. .....
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~------la~~l~~~G~~V~~~D~RGhG~S~r--~~rg~ 82 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEE------LADDLAARGFDVYALDLRGHGRSPR--GQRGH 82 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHH------HHHHHHhCCCEEEEecCCCCCCCCC--CCcCC
Confidence 34455667888988887543 23689999999998876543 3367788999999999999999963 12234
Q ss_pred CCCHHHHHHHHHHHHHHcC----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 99 VLSVDDLADQIAEVLNHFG----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
..+++++.+|+.++++... ..+++++||||||.|++.++.+++.+|+++||.+|.......... ....... .
T Consensus 83 ~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~---~~~~~~~-~ 158 (298)
T COG2267 83 VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILR---LILARLA-L 158 (298)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHH---HHHHHHh-c
Confidence 4569999999999998775 368999999999999999999999999999999999987641100 0000000 0
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHh-hhchhhHHHHHHHHcC-CccHHhhhccCCccEEEEecCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLD-ERQSSNVWHFLEAING-RPDISEGLRKLQCRSLIFVGES 252 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~Pvl~i~g~~ 252 (348)
...........................+++..+.+...-. .............+.. ..........+++|+|+++|++
T Consensus 159 ~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~ 238 (298)
T COG2267 159 KLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGD 238 (298)
T ss_pred ccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCC
Confidence 0000000000000000001111111113344444433221 1111111111111111 1123344567899999999999
Q ss_pred CCCCc---hHHHHHHhhccCCcEEEEecCCCCCcccc-Ch--hhhHHHHHHHHhhc
Q 018947 253 SPFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEE-QP--HAMLIPMEYFLMGY 302 (348)
Q Consensus 253 D~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p--~~~~~~i~~fl~~~ 302 (348)
|.+++ ...++.+....++.++++++++.|.++.| .. +++.+.+.+|+.+.
T Consensus 239 D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 239 DRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred CccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 99985 22345566666668999999999998886 44 78889999999876
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-26 Score=198.83 Aligned_cols=253 Identities=13% Similarity=0.115 Sum_probs=155.6
Q ss_pred CCceeEEEEccCC---CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHH
Q 018947 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (348)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 104 (348)
++..+++..+.+. .+++|||+||++++...|. ..+..+..+||+|+++|+||||.|+... ....+++.
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~------~~a~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~ 189 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYL------HFAKQLTSCGFGVYAMDWIGHGGSDGLH---GYVPSLDY 189 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHH------HHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCCcCHHH
Confidence 4567887777542 3468999999988765432 2234555789999999999999987431 23457889
Q ss_pred HHHHHHHHHHHcCC----CceeEEEeChhHHHHHHHHHhCCC---CcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 105 LADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 105 ~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
+++|+.++++.+.. .+++++||||||.+++.++. +|+ +|+++|+.+|........... ......+
T Consensus 190 ~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~--~~~~~l~----- 261 (395)
T PLN02652 190 VVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIV--GAVAPIF----- 261 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHH--HHHHHHH-----
Confidence 99999999987653 37999999999999997664 554 899999999876543211111 0111110
Q ss_pred chhHHHHHHHhhhcccc--cCCCCCCChHH-HHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 178 CGVVKELLLKRYFSKEV--RGNAQVPESDI-VQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
......+.-... .......++.. ...+.+................+....+....+.++++|+|+++|++|.
T Consensus 262 -----~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~ 336 (395)
T PLN02652 262 -----SLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADR 336 (395)
T ss_pred -----HHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCC
Confidence 000000000000 00000001111 1111100000000000000000000012345678899999999999999
Q ss_pred CC--chHHHHHHhhccCCcEEEEecCCCCCcccc-ChhhhHHHHHHHHhhc
Q 018947 255 FH--SEAVHMTSKIDRRYSALVEVQACGSMVTEE-QPHAMLIPMEYFLMGY 302 (348)
Q Consensus 255 ~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~~ 302 (348)
++ ...+.+.+.+.+...+++++++++|.++.| +++++.+.|.+||++.
T Consensus 337 vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 337 VTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred CCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 99 355567777766568899999999998776 8999999999999875
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=181.82 Aligned_cols=262 Identities=15% Similarity=0.118 Sum_probs=175.1
Q ss_pred cceee-cCCceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 22 DNLIK-TSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 22 ~~~v~-~~~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
+.+++ .+|.++.+..+-+ +.+..|+++||++.+....++ ..+..+...||.|+++|++|||.|+.. .
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~-----~~a~~l~~~g~~v~a~D~~GhG~SdGl---~ 100 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQ-----STAKRLAKSGFAVYAIDYEGHGRSDGL---H 100 (313)
T ss_pred eeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHH-----HHHHHHHhCCCeEEEeeccCCCcCCCC---c
Confidence 33444 4666888877754 233479999999988643333 233677788999999999999999843 3
Q ss_pred CCCCCHHHHHHHHHHHHHHcC------CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH--HHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWLYNKVM 168 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~ 168 (348)
....+++..++|+..+.+... ..+.+|+||||||+|++.++.+.|+..+++|+++|........ .+.....+
T Consensus 101 ~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l 180 (313)
T KOG1455|consen 101 AYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISIL 180 (313)
T ss_pred ccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHH
Confidence 456789999999998887532 2478999999999999999999999999999999988753221 11101111
Q ss_pred HHHHHhhccchhHHHHHHHhhhc-ccc-cCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcCCccHHhhhccCCccE
Q 018947 169 SNLLYYYGMCGVVKELLLKRYFS-KEV-RGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRS 245 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 245 (348)
..+ ..++++|.- +.. .......+++....++..-... ....+....+.+....++.+.+.++++|.
T Consensus 181 ~~l-----------~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPf 249 (313)
T KOG1455|consen 181 TLL-----------SKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPF 249 (313)
T ss_pred HHH-----------HHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccE
Confidence 000 222222221 100 0111111334443333322221 11123333333333357778899999999
Q ss_pred EEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccc----cChhhhHHHHHHHHhhc
Q 018947 246 LIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTE----EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 246 l~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~~ 302 (348)
+++||+.|.++ ..++++.+.....+.++.++||+-|.++. |+-+.|...|.+||++.
T Consensus 250 lilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 250 LILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999998 46677899888888999999999998886 34456778889999763
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=195.69 Aligned_cols=267 Identities=13% Similarity=0.129 Sum_probs=153.7
Q ss_pred Cccceeec-CCceeEEEEc------cCCCCCeEEEeCCCCCChhh-hccccccchhhhhhccCCeEEEEeCCCCCCCCCC
Q 018947 20 GKDNLIKT-SHGSLSVTIY------GDQDKPALVTYPDLALNYMS-CFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (348)
Q Consensus 20 ~~~~~v~~-~~~~l~~~~~------g~~~~p~vvllHG~~~~~~~-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 91 (348)
.++..+.+ +|+.+.+... .+.++|+||++||+++++.. |... .+..++++||+|+++|+||||.|..
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~-----~~~~~~~~g~~vv~~d~rG~G~s~~ 145 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRH-----MLLRARSKGWRVVVFNSRGCADSPV 145 (388)
T ss_pred eeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHH-----HHHHHHHCCCEEEEEecCCCCCCCC
Confidence 34455666 5666665432 23467899999999877543 3221 2245668899999999999999864
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHcCC----CceeEEEeChhHHHHHHHHHhCCCC--cceEEEecCCCCCCChHHHHHH
Q 018947 92 AISDDEPVLSVDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHR--VLGLILVSPLCKAPSWTEWLYN 165 (348)
Q Consensus 92 ~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~ 165 (348)
..+ ......+++|+.+++++++. .+++++||||||.+++.++.+++++ |.++++++++...........
T Consensus 146 ~~~----~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~- 220 (388)
T PLN02511 146 TTP----QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFH- 220 (388)
T ss_pred CCc----CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHh-
Confidence 322 12224556677777766654 6899999999999999999999987 888888876654311110000
Q ss_pred HHHHHHHHhhccchhHHHHHH--Hhhhccc--ccCCCCCCChHHHHHHHHHHhhh--chhhHHHHHHHHcCCccHHhhhc
Q 018947 166 KVMSNLLYYYGMCGVVKELLL--KRYFSKE--VRGNAQVPESDIVQACRRLLDER--QSSNVWHFLEAINGRPDISEGLR 239 (348)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~ 239 (348)
..... .....+......... ...+... ...............+.+.+... .......++. ..+....+.
T Consensus 221 ~~~~~-~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~----~~s~~~~L~ 295 (388)
T PLN02511 221 KGFNN-VYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYS----NSSSSDSIK 295 (388)
T ss_pred ccHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHH----HcCchhhhc
Confidence 00000 000000000000000 0001000 00000000000000111111100 0011111111 123456788
Q ss_pred cCCccEEEEecCCCCCCchH---HHHHHhhccCCcEEEEecCCCCCccccChhh------hHHHHHHHHhhcc
Q 018947 240 KLQCRSLIFVGESSPFHSEA---VHMTSKIDRRYSALVEVQACGSMVTEEQPHA------MLIPMEYFLMGYG 303 (348)
Q Consensus 240 ~i~~Pvl~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~------~~~~i~~fl~~~~ 303 (348)
+|++|+|+|+|++|++++.. ....+.+++ +++++++++||+.++|+|+. +.+.+.+||+...
T Consensus 296 ~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~--~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 296 HVRVPLLCIQAANDPIAPARGIPREDIKANPN--CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred cCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC--EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 99999999999999988422 235555665 99999999999999999976 4899999998874
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-25 Score=167.94 Aligned_cols=253 Identities=13% Similarity=0.138 Sum_probs=167.4
Q ss_pred CccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccC-CeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
-.+..+.++|.+++|..+|.. ...|+++.|.-+++..-+ .+++..+... .+.|+++|.||+|.|.+|.. ...
T Consensus 21 ~te~kv~vng~ql~y~~~G~G-~~~iLlipGalGs~~tDf-----~pql~~l~k~l~~TivawDPpGYG~SrPP~R-kf~ 93 (277)
T KOG2984|consen 21 YTESKVHVNGTQLGYCKYGHG-PNYILLIPGALGSYKTDF-----PPQLLSLFKPLQVTIVAWDPPGYGTSRPPER-KFE 93 (277)
T ss_pred hhhheeeecCceeeeeecCCC-CceeEecccccccccccC-----CHHHHhcCCCCceEEEEECCCCCCCCCCCcc-cch
Confidence 355567789999999999933 336888888877664422 2333444443 49999999999999987632 233
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccc
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (348)
..-+..-+++..++++.++.+++.++|+|-||..++..|+++++.|.++|+.++............... .. -..+.
T Consensus 94 ~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgi-Rd---v~kWs 169 (277)
T KOG2984|consen 94 VQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGI-RD---VNKWS 169 (277)
T ss_pred HHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhch-HH---Hhhhh
Confidence 344555677788899999999999999999999999999999999999999988776543221111000 00 00000
Q ss_pred hhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--
Q 018947 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-- 256 (348)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~-- 256 (348)
...++. +...++++ .+...+.++.. ....+..+.+-.-.+..+.+++||+|+++|++|+++
T Consensus 170 ~r~R~P-~e~~Yg~e----------~f~~~wa~wvD------~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~ 232 (277)
T KOG2984|consen 170 ARGRQP-YEDHYGPE----------TFRTQWAAWVD------VVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGD 232 (277)
T ss_pred hhhcch-HHHhcCHH----------HHHHHHHHHHH------HHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCC
Confidence 000000 11111111 11111111111 111111111211234568899999999999999999
Q ss_pred chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 257 SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+....+....+. +++++.|+++|.+++..+++|+..+.+||++.
T Consensus 233 ~hv~fi~~~~~~--a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 233 PHVCFIPVLKSL--AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCccchhhhccc--ceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 444556677776 99999999999999999999999999999864
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=165.68 Aligned_cols=224 Identities=13% Similarity=0.183 Sum_probs=156.9
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---cC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---FG 117 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---l~ 117 (348)
++..|||+||+.++..... .....+..+||.|++|.+||||... ......+.+||-+++.+.-+. .+
T Consensus 14 G~~AVLllHGFTGt~~Dvr------~Lgr~L~e~GyTv~aP~ypGHG~~~----e~fl~t~~~DW~~~v~d~Y~~L~~~g 83 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVR------MLGRYLNENGYTVYAPRYPGHGTLP----EDFLKTTPRDWWEDVEDGYRDLKEAG 83 (243)
T ss_pred CCEEEEEEeccCCCcHHHH------HHHHHHHHCCceEecCCCCCCCCCH----HHHhcCCHHHHHHHHHHHHHHHHHcC
Confidence 4478999999999987642 2235666789999999999999753 334567888888777665544 46
Q ss_pred CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCC
Q 018947 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197 (348)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
.+.|.++|.||||.+++.+|..+| ++++|.++++.....+...... ....+.+ ...+ +.
T Consensus 84 y~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~--~l~y~~~-----------~kk~---e~--- 142 (243)
T COG1647 84 YDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEG--LLEYFRN-----------AKKY---EG--- 142 (243)
T ss_pred CCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHH--HHHHHHH-----------hhhc---cC---
Confidence 689999999999999999999998 9999999998886655432210 0000000 0000 00
Q ss_pred CCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEE
Q 018947 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVE 275 (348)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~ 275 (348)
.+.+..+...+.+..........+...+ .+....+..|..|++++.|++|+++ ..+..+.+.+.....++.+
T Consensus 143 ---k~~e~~~~e~~~~~~~~~~~~~~~~~~i---~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~ 216 (243)
T COG1647 143 ---KDQEQIDKEMKSYKDTPMTTTAQLKKLI---KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKW 216 (243)
T ss_pred ---CCHHHHHHHHHHhhcchHHHHHHHHHHH---HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEE
Confidence 0233333332322222222333333332 3566678889999999999999999 4556678888877799999
Q ss_pred ecCCCCCccc-cChhhhHHHHHHHHhh
Q 018947 276 VQACGSMVTE-EQPHAMLIPMEYFLMG 301 (348)
Q Consensus 276 ~~~~gH~~~~-e~p~~~~~~i~~fl~~ 301 (348)
++++||.+.. ++.+.+.+.+..||++
T Consensus 217 ~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 217 LEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred EccCCceeecchhHHHHHHHHHHHhhC
Confidence 9999998887 5789999999999974
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-23 Score=179.46 Aligned_cols=266 Identities=12% Similarity=0.048 Sum_probs=149.7
Q ss_pred CCccceeec-CCceeEEEEc--c--CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 19 SGKDNLIKT-SHGSLSVTIY--G--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 19 ~~~~~~v~~-~~~~l~~~~~--g--~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
......+++ +|+.+.+... + ++.+|+||++||++++....+. ...+..+.++||+|+++|+||||.+....
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~----~~~~~~l~~~G~~v~~~d~rG~g~~~~~~ 105 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYA----HGLLEAAQKRGWLGVVMHFRGCSGEPNRL 105 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHH----HHHHHHHHHCCCEEEEEeCCCCCCCccCC
Confidence 334455666 4455544332 1 1356899999999887543211 12234567789999999999999764321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCC--cceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR--VLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
.........+|+...+..+.++++..+++++||||||.+++.+++++++. +.++|+++++............ .....
T Consensus 106 ~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~-~~~~~ 184 (324)
T PRK10985 106 HRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQ-GFSRV 184 (324)
T ss_pred cceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhh-hHHHH
Confidence 11111223455554455555567778899999999999999888887654 8999999987654321111100 00000
Q ss_pred HHhhccchhHH---HHHHHhhhcccccCCCCCCChHHHH------HHHHHHhhh--chhhHHHHHHHHcCCccHHhhhcc
Q 018947 172 LYYYGMCGVVK---ELLLKRYFSKEVRGNAQVPESDIVQ------ACRRLLDER--QSSNVWHFLEAINGRPDISEGLRK 240 (348)
Q Consensus 172 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 240 (348)
. ...+..... ......+...... +.+... .+.+.+... .-.....++.. .+..+.+.+
T Consensus 185 ~-~~~l~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~----~~~~~~l~~ 253 (324)
T PRK10985 185 Y-QRYLLNLLKANAARKLAAYPGTLPI------NLAQLKSVRRLREFDDLITARIHGFADAIDYYRQ----CSALPLLNQ 253 (324)
T ss_pred H-HHHHHHHHHHHHHHHHHhccccccC------CHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHH----CChHHHHhC
Confidence 0 000000000 1111112111100 111111 111111110 11122222221 234567889
Q ss_pred CCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccCh-----hhhHHHHHHHHhhc
Q 018947 241 LQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQP-----HAMLIPMEYFLMGY 302 (348)
Q Consensus 241 i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-----~~~~~~i~~fl~~~ 302 (348)
+++|+++|+|++|++++ ....+.+..++ .++++++++||+.++|.. -..-+.+.+|++..
T Consensus 254 i~~P~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 254 IRKPTLIIHAKDDPFMTHEVIPKPESLPPN--VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCCEEEEecCCCCCCChhhChHHHHhCCC--eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 99999999999999883 22334455554 889999999999998742 36678888888765
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-23 Score=180.18 Aligned_cols=258 Identities=11% Similarity=0.075 Sum_probs=152.1
Q ss_pred cCCceeEEEEccC-CCCCeEEEeCCCCCChhhhccc-----------------c---ccchhhhhhccCCeEEEEeCCCC
Q 018947 27 TSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQG-----------------L---FFCPEACSLLLHNFCIYHINPPG 85 (348)
Q Consensus 27 ~~~~~l~~~~~g~-~~~p~vvllHG~~~~~~~~~~~-----------------~---~~~~~~~~~~~~g~~vi~~D~~G 85 (348)
.+|..|+++.+.+ ..+.+|+++||++.+....+.. . +....+..+.+.||+|+++|+||
T Consensus 5 ~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rG 84 (332)
T TIGR01607 5 KDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQG 84 (332)
T ss_pred CCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccc
Confidence 3666788877653 3456899999999988522110 0 00122456668899999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC------------------------CCceeEEEeChhHHHHHHHHHhCC
Q 018947 86 HEFGAAAISDDEPVLSVDDLADQIAEVLNHFG------------------------LGAVMCMGVTAGAYILTLFAMKYR 141 (348)
Q Consensus 86 ~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~------------------------~~~v~lvGhS~Gg~ia~~~a~~~p 141 (348)
||.|...........+++++++|+..+++.+. ..+++++||||||.+++.++.+++
T Consensus 85 HG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 85 HGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred cCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 99987431111122589999999999987642 247999999999999999987654
Q ss_pred C--------CcceEEEecCCCCCCCh-------HHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHH
Q 018947 142 H--------RVLGLILVSPLCKAPSW-------TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIV 206 (348)
Q Consensus 142 ~--------~v~~lvl~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (348)
+ .++++|++++....... ..... ..+...+.. +...+.... ......++...
T Consensus 165 ~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~-~~l~~~~~~----------~~p~~~~~~--~~~~~~~~~~~ 231 (332)
T TIGR01607 165 KSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFY-LPVMNFMSR----------VFPTFRISK--KIRYEKSPYVN 231 (332)
T ss_pred cccccccccccceEEEeccceEEecccCCCcchhhhhH-HHHHHHHHH----------HCCcccccC--ccccccChhhh
Confidence 3 58999988887542110 01100 011111000 000000000 00000012222
Q ss_pred HHHHHHHhhhc----hhhHHHHHHHHcCCccHHhhhccC--CccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecC
Q 018947 207 QACRRLLDERQ----SSNVWHFLEAINGRPDISEGLRKL--QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQA 278 (348)
Q Consensus 207 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~ 278 (348)
+.+...-.... .......+... ......+..+ ++|+|+++|++|.++ .....+.+.+...+.+++++++
T Consensus 232 ~~~~~Dp~~~~~~~s~~~~~~l~~~~---~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g 308 (332)
T TIGR01607 232 DIIKFDKFRYDGGITFNLASELIKAT---DTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLED 308 (332)
T ss_pred hHHhcCccccCCcccHHHHHHHHHHH---HHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECC
Confidence 22211110010 11111111111 1122234455 799999999999998 3445566666555589999999
Q ss_pred CCCCccccC-hhhhHHHHHHHHh
Q 018947 279 CGSMVTEEQ-PHAMLIPMEYFLM 300 (348)
Q Consensus 279 ~gH~~~~e~-p~~~~~~i~~fl~ 300 (348)
++|.++.|. ++++.+.|.+||+
T Consensus 309 ~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 309 MDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCccCCCHHHHHHHHHHHhh
Confidence 999999874 6889999999986
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-23 Score=168.08 Aligned_cols=241 Identities=15% Similarity=0.129 Sum_probs=156.7
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccC-CeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG- 117 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~- 117 (348)
...|+++++||+-+++..|...- ..+... +-.|+++|.|.||.|... ...+.+++++|+..+|+..+
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~------k~Ls~~l~~~v~~vd~RnHG~Sp~~-----~~h~~~~ma~dv~~Fi~~v~~ 118 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVA------KNLSRKLGRDVYAVDVRNHGSSPKI-----TVHNYEAMAEDVKLFIDGVGG 118 (315)
T ss_pred CCCCceEEecccccCCCCHHHHH------HHhcccccCceEEEecccCCCCccc-----cccCHHHHHHHHHHHHHHccc
Confidence 47899999999999998764222 233322 668999999999998644 34679999999999999885
Q ss_pred ---CCceeEEEeChhH-HHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccc---hhHHHHHHHhhh
Q 018947 118 ---LGAVMCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC---GVVKELLLKRYF 190 (348)
Q Consensus 118 ---~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 190 (348)
..+++++|||||| .+++.++...|+.+..+|+++..+..-+.........+... ...... ....+...+.+.
T Consensus 119 ~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m-~~~d~~~~~~~~rke~~~~l~ 197 (315)
T KOG2382|consen 119 STRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAM-IQLDLSIGVSRGRKEALKSLI 197 (315)
T ss_pred ccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHH-HhccccccccccHHHHHHHHH
Confidence 5789999999999 88888888999999999999877642211111111111111 011111 001111222221
Q ss_pred cccccCCCCCCChHHHHHHHHHHhh----------hchhhHHHHHHH--HcCCccHHhhhccCCccEEEEecCCCCCCc-
Q 018947 191 SKEVRGNAQVPESDIVQACRRLLDE----------RQSSNVWHFLEA--INGRPDISEGLRKLQCRSLIFVGESSPFHS- 257 (348)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~- 257 (348)
.-.. +..+.+++...+.. .+...+...+.. ...++...+. .....||+++.|.++..++
T Consensus 198 ~~~~-------d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~ 269 (315)
T KOG2382|consen 198 EVGF-------DNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVPD 269 (315)
T ss_pred HHhc-------chHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccceeEEecCCCCCcCh
Confidence 1111 22233333333321 112223333333 2222222223 5678999999999999983
Q ss_pred -hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 258 -EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 258 -~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
....+.+.+++ ++++.++++||+++.|+|+++.+.|.+|+++.
T Consensus 270 ~~~~~~~~~fp~--~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 270 EHYPRMEKIFPN--VEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred hHHHHHHHhccc--hheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 34467788887 99999999999999999999999999999764
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-22 Score=169.37 Aligned_cols=252 Identities=14% Similarity=0.132 Sum_probs=144.5
Q ss_pred eeecCCceeEEEEc--cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 24 LIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 24 ~v~~~~~~l~~~~~--g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
.+..++.++.-... .+..++.||++||......+++.. +...+..+.++||+|+++|+||||.|... ..+
T Consensus 6 ~~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~--~~~la~~l~~~G~~v~~~Dl~G~G~S~~~------~~~ 77 (274)
T TIGR03100 6 TFSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQ--FVLLARRLAEAGFPVLRFDYRGMGDSEGE------NLG 77 (274)
T ss_pred EEEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhH--HHHHHHHHHHCCCEEEEeCCCCCCCCCCC------CCC
Confidence 34455655543322 223456788888765433222111 11233456678999999999999998632 246
Q ss_pred HHHHHHHHHHHHHHc-----CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHH-HHHHHHHHHHhh
Q 018947 102 VDDLADQIAEVLNHF-----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL-YNKVMSNLLYYY 175 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~ 175 (348)
++++.+|+.++++.+ +.++++++|||+||.+++.+|.. +.+|+++|+++|........... ....... .
T Consensus 78 ~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~----~ 152 (274)
T TIGR03100 78 FEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLG----Q 152 (274)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHH----H
Confidence 777888888877765 55789999999999999988765 56899999999876532211110 0000000 0
Q ss_pred ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
... .....+.+.... . .......+...+... .......... ...+....+..+++|+++++|++|.
T Consensus 153 ~~~----~~~~~~~~~g~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~P~ll~~g~~D~ 219 (274)
T TIGR03100 153 LLS----ADFWRKLLSGEV-N-----LGSSLRGLGDALLKARQKGDEVAHGG---LAERMKAGLERFQGPVLFILSGNDL 219 (274)
T ss_pred HhC----hHHHHHhcCCCc-c-----HHHHHHHHHHHHHhhhhcCCCcccch---HHHHHHHHHHhcCCcEEEEEcCcch
Confidence 000 011111111110 0 111122222211100 0000000000 0123445567789999999999998
Q ss_pred CCchH-------HHHHHhhccCCcEEEEecCCCCCcccc-ChhhhHHHHHHHHhh
Q 018947 255 FHSEA-------VHMTSKIDRRYSALVEVQACGSMVTEE-QPHAMLIPMEYFLMG 301 (348)
Q Consensus 255 ~~~~~-------~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 301 (348)
..+.. ....+.+..++++++.+++++|++..+ .++++.+.|.+||++
T Consensus 220 ~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 220 TAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred hHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 76321 334454643459999999999998554 559999999999963
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.4e-23 Score=169.23 Aligned_cols=211 Identities=20% Similarity=0.298 Sum_probs=131.0
Q ss_pred eEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 76 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
|+|+++|+||+|.|++........++.+++++++..++++++.++++++||||||.+++.+|+++|++|+++|++++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 78999999999999840012356799999999999999999999999999999999999999999999999999998741
Q ss_pred CC------ChHHHHHHHHHHHHHHhhccchhHHHHHHHhhh------cccccCCCCCCChHHHHHHHHHHhhh-chhhHH
Q 018947 156 AP------SWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYF------SKEVRGNAQVPESDIVQACRRLLDER-QSSNVW 222 (348)
Q Consensus 156 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 222 (348)
.. .................. ..... ......+. ..... ............... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 152 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNF-LSDPI-KPLLGRWPKQFFAYDREFV------EDFLKQFQSQQYARFAETDAFD 152 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHH------HTHHHHHHHHHHHHTCHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhcc-ccccc-hhhhhhhhhheeeccCccc------cchhhccchhhhhHHHHHHHHh
Confidence 00 000000000000000000 00000 00001000 00000 000000000001100 000000
Q ss_pred HH---HHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHH
Q 018947 223 HF---LEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPME 296 (348)
Q Consensus 223 ~~---~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 296 (348)
.. ........+....+.++++|+++++|++|.+++ ....+.+.+++ .++++++++||+.++++|+++++.|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 153 NMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN--SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT--EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred hhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC--CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 10 111111134556678899999999999999983 44457888887 99999999999999999999999885
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-21 Score=172.03 Aligned_cols=237 Identities=14% Similarity=0.088 Sum_probs=144.7
Q ss_pred CCCCccceeecCCc-eeEEEEcc---CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC
Q 018947 17 PPSGKDNLIKTSHG-SLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (348)
Q Consensus 17 ~~~~~~~~v~~~~~-~l~~~~~g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 92 (348)
....++..+.+.++ .+..+.+- +...|+||++||+++.....+ ......+...||.|+++|+||+|.|...
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~-----~~~~~~La~~Gy~vl~~D~pG~G~s~~~ 239 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYY-----RLFRDYLAPRGIAMLTIDMPSVGFSSKW 239 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhH-----HHHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 33455666777666 77655542 234577777777765432221 1223466788999999999999998632
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHc---CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC-ChHHHHHHHHH
Q 018947 93 ISDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP-SWTEWLYNKVM 168 (348)
Q Consensus 93 ~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~ 168 (348)
+ ..........++.+++... +.+++.++||||||++++.+|..+|++|+++|++++..... ....+. .
T Consensus 240 -~---~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~--~-- 311 (414)
T PRK05077 240 -K---LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQ--Q-- 311 (414)
T ss_pred -C---ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhh--h--
Confidence 1 1133444455666666544 55789999999999999999999999999999998876421 100000 0
Q ss_pred HHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhh-ccCCccEEE
Q 018947 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGL-RKLQCRSLI 247 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~Pvl~ 247 (348)
.+.... ...+...++.... ..+ .+... +..+.. .....+ .++++|+|+
T Consensus 312 -------~~p~~~-~~~la~~lg~~~~------~~~---~l~~~------------l~~~sl--~~~~~l~~~i~~PvLi 360 (414)
T PRK05077 312 -------QVPEMY-LDVLASRLGMHDA------SDE---ALRVE------------LNRYSL--KVQGLLGRRCPTPMLS 360 (414)
T ss_pred -------hchHHH-HHHHHHHhCCCCC------ChH---HHHHH------------hhhccc--hhhhhhccCCCCcEEE
Confidence 000000 0011111111100 111 11111 111100 000111 578999999
Q ss_pred EecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 248 FVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|+|++|++++ ..+.+.+..++ .++++++++ ++.+.++++.+.|.+||++.
T Consensus 361 I~G~~D~ivP~~~a~~l~~~~~~--~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 361 GYWKNDPFSPEEDSRLIASSSAD--GKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred EecCCCCCCCHHHHHHHHHhCCC--CeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 9999999984 44456776766 899999986 46689999999999999764
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=171.58 Aligned_cols=280 Identities=14% Similarity=0.098 Sum_probs=162.0
Q ss_pred CCCCCccceeecC-CceeEEEEcc-------CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCC
Q 018947 16 PPPSGKDNLIKTS-HGSLSVTIYG-------DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE 87 (348)
Q Consensus 16 ~~~~~~~~~v~~~-~~~l~~~~~g-------~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 87 (348)
.-++.+++.+.|. |..+.+.... +..+|+|||+||++.++..|....-.......+..+||+|+++|+||+|
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 4467789999884 4566655532 1246899999999988887742210111222455679999999999988
Q ss_pred CCCCC-----CCCCCCCCCHHHHH-HHHHHHHHHc---CCCceeEEEeChhHHHHHHHHHhCCC---CcceEEEecCCCC
Q 018947 88 FGAAA-----ISDDEPVLSVDDLA-DQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCK 155 (348)
Q Consensus 88 ~S~~~-----~~~~~~~~~~~~~~-~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 155 (348)
.|... .+.....+++++++ .|+.++++.+ ..++++++|||+||.+++.++ .+|+ +|+.+++++|...
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 65321 11112257888888 7999999876 347899999999999999554 5676 6889999998875
Q ss_pred CCChHHHH----HHHHHHHHHHhhccchh-----HHHHH--------------HHhhhcccccCCCCCCChHHHHHHHHH
Q 018947 156 APSWTEWL----YNKVMSNLLYYYGMCGV-----VKELL--------------LKRYFSKEVRGNAQVPESDIVQACRRL 212 (348)
Q Consensus 156 ~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (348)
........ ........+...+...+ ....+ +..+.+... . .+......+...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~-~----~n~~~~~~~~~~ 273 (395)
T PLN02872 199 LDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNC-C----FNASRIDYYLEY 273 (395)
T ss_pred hccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCc-c----cchhhhhHHHhc
Confidence 42211111 00011111111111111 00111 111111110 0 011111111111
Q ss_pred Hh-hhchhhHHHHHHH-------------------HcCCccHHhhhccC--CccEEEEecCCCCCC--chHHHHHHhhcc
Q 018947 213 LD-ERQSSNVWHFLEA-------------------INGRPDISEGLRKL--QCRSLIFVGESSPFH--SEAVHMTSKIDR 268 (348)
Q Consensus 213 ~~-~~~~~~~~~~~~~-------------------~~~~~~~~~~l~~i--~~Pvl~i~g~~D~~~--~~~~~~~~~~~~ 268 (348)
.. ....+++..+... +.......-.+.++ ++|+++++|++|.++ .....+.+.+++
T Consensus 274 ~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~ 353 (395)
T PLN02872 274 EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS 353 (395)
T ss_pred CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC
Confidence 00 0111111111111 10000011135666 589999999999998 345667888875
Q ss_pred CCcEEEEecCCCCC---ccccChhhhHHHHHHHHhhc
Q 018947 269 RYSALVEVQACGSM---VTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 269 ~~~~~~~~~~~gH~---~~~e~p~~~~~~i~~fl~~~ 302 (348)
..+++.++++||. ...+.|+++.+.|.+|+++.
T Consensus 354 -~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 354 -KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred -ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 2578889999995 44589999999999999875
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=166.20 Aligned_cols=248 Identities=11% Similarity=0.069 Sum_probs=143.8
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHH-----HHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ-----IAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d-----l~~~l~~ 115 (348)
.+++||++||+..++..+... .+...+..+..+||+|+++|++|+|.|.. ..++++++.+ +..+++.
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~-~~~~~~~~L~~~G~~V~~~D~~g~g~s~~-------~~~~~d~~~~~~~~~v~~l~~~ 132 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQ-EDRSLVRGLLERGQDVYLIDWGYPDRADR-------YLTLDDYINGYIDKCVDYICRT 132 (350)
T ss_pred CCCcEEEeccccccceeccCC-CCchHHHHHHHCCCeEEEEeCCCCCHHHh-------cCCHHHHHHHHHHHHHHHHHHH
Confidence 456799999986655443221 23455667778899999999999987652 2466666543 3445566
Q ss_pred cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHH---HHHH-HHHHHHHhhcc-chhHHHH------
Q 018947 116 FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW---LYNK-VMSNLLYYYGM-CGVVKEL------ 184 (348)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~-~~~~~~~------ 184 (348)
.+.++++++||||||.+++.+++.+|++|+++|++++.......... .... .........+. .......
T Consensus 133 ~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~ 212 (350)
T TIGR01836 133 SKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLK 212 (350)
T ss_pred hCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 67889999999999999999999999999999999987764321100 0000 00111111111 0000000
Q ss_pred ----HHHhhhcccccCCCCCCChHHHHHHHH---HHhh---hchhhHHHHHHHHcCCc----------cHHhhhccCCcc
Q 018947 185 ----LLKRYFSKEVRGNAQVPESDIVQACRR---LLDE---RQSSNVWHFLEAINGRP----------DISEGLRKLQCR 244 (348)
Q Consensus 185 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~----------~~~~~l~~i~~P 244 (348)
....+....... .+++..+.+.+ .... .....+..++..+.... +....+.++++|
T Consensus 213 p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~P 288 (350)
T TIGR01836 213 PFSLGYQKYVNLVDIL----EDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMP 288 (350)
T ss_pred cchhhhHHHHHHHHhc----CChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCC
Confidence 000000000000 02222222211 1110 01112222222211100 112246788999
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccC---hhhhHHHHHHHHhh
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQ---PHAMLIPMEYFLMG 301 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~---p~~~~~~i~~fl~~ 301 (348)
+++++|++|.+++ ....+.+.+++...++++++ +||+..+.+ ++++.+.|.+||.+
T Consensus 289 vliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 289 ILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred eEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 9999999999883 45567777776456777776 899887754 47899999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-22 Score=156.35 Aligned_cols=268 Identities=15% Similarity=0.186 Sum_probs=155.6
Q ss_pred cceeecCCce--eEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGS--LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 22 ~~~v~~~~~~--l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
+..+..++.. +..+..++ ..+|.++++||.|.+..+|.. ...++.. -..+|+++|+||||++... .
T Consensus 50 kedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~------~a~el~s~~~~r~~a~DlRgHGeTk~~---~ 120 (343)
T KOG2564|consen 50 KEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAI------FASELKSKIRCRCLALDLRGHGETKVE---N 120 (343)
T ss_pred ccccccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHH------HHHHHHhhcceeEEEeeccccCccccC---C
Confidence 3445554444 55554443 478999999999999987632 2234443 3678899999999998743 3
Q ss_pred CCCCCHHHHHHHHHHHHHHcC---CCceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHFG---LGAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
....+.+.++.|+.++++.+= ..+++||||||||.||...|.. -|. +.+++.++..-... .+.. ..+..+
T Consensus 121 e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtA--meAL--~~m~~f 195 (343)
T KOG2564|consen 121 EDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTA--MEAL--NSMQHF 195 (343)
T ss_pred hhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHH--HHHH--HHHHHH
Confidence 456899999999999997752 3679999999999999888764 355 89999988654321 1110 111111
Q ss_pred HHhhc-cchhHHHHHHHhhhcccccCC--CCCCChHHHHHHH---HHHhhhchhhHHHHHHHHcCCccHHhhhccCCccE
Q 018947 172 LYYYG-MCGVVKELLLKRYFSKEVRGN--AQVPESDIVQACR---RLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245 (348)
Q Consensus 172 ~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 245 (348)
++... ....+.+.+-...-....+.. ....-+....... ....+.+......|+..++. ++.+.+-...+|-
T Consensus 196 L~~rP~~F~Si~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~--gLS~~Fl~~p~~k 273 (343)
T KOG2564|consen 196 LRNRPKSFKSIEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFK--GLSDKFLGLPVPK 273 (343)
T ss_pred HhcCCccccchhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHh--hhhhHhhCCCccc
Confidence 11100 000010111110000000000 0000000000000 00111122223334444322 4445555678888
Q ss_pred EEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhccccCCC
Q 018947 246 LIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPT 308 (348)
Q Consensus 246 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 308 (348)
++|.+..|.+-.. -...++.. +.++.+++.+||+.+.+.|..++..+..|+.+..+..|.
T Consensus 274 lLilAg~d~LDkd--LtiGQMQG-k~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~~~~~~ 333 (343)
T KOG2564|consen 274 LLILAGVDRLDKD--LTIGQMQG-KFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNRFAEPK 333 (343)
T ss_pred eeEEecccccCcc--eeeeeecc-ceeeeeecccCceeccCCcchHHHHHHHHHhhhcccccc
Confidence 8888888876311 11112222 268899999999999999999999999999998766554
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.87 E-value=8e-20 Score=164.93 Aligned_cols=238 Identities=12% Similarity=0.045 Sum_probs=141.3
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~ 120 (348)
.+++||++||+......++..- ..+.+..+.++||+|+++|++|+|.+..... ...|..+.+.+.+..+++.++.++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p-~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~--~ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRP-QNSLVRWLVEQGHTVFVISWRNPDASQADKT--FDDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeeccc-chHHHHHHHHCCcEEEEEECCCCCcccccCC--hhhhHHHHHHHHHHHHHHhcCCCC
Confidence 5689999999977665543221 1234567778999999999999998864422 234555667777888888889999
Q ss_pred eeEEEeChhHHHHH----HHHHhC-CCCcceEEEecCCCCCCChHH--HHH----HHHHHHHHHhhccchh---------
Q 018947 121 VMCMGVTAGAYILT----LFAMKY-RHRVLGLILVSPLCKAPSWTE--WLY----NKVMSNLLYYYGMCGV--------- 180 (348)
Q Consensus 121 v~lvGhS~Gg~ia~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~--------- 180 (348)
++++||||||.++. .+++.+ +++|++++++++......... ... ...........+..+.
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~ 343 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSL 343 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHh
Confidence 99999999999852 345565 789999999998776432111 000 0011111111111100
Q ss_pred ------HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCC----------ccHHhhhccCCcc
Q 018947 181 ------VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR----------PDISEGLRKLQCR 244 (348)
Q Consensus 181 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~i~~P 244 (348)
+....+..++..... .......+...........+..+++.+... .+....+.+|++|
T Consensus 344 lrp~~l~w~~~v~~yl~g~~~------~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vP 417 (532)
T TIGR01838 344 LRENDLIWNYYVDNYLKGKSP------VPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVP 417 (532)
T ss_pred cChhhHHHHHHHHHHhcCCCc------cchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCC
Confidence 001111111110000 000000000000111222233333222211 1223468889999
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChh
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPH 289 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 289 (348)
+++|+|++|.+++ ....+.+.+++ .+.++++++||.+++++|.
T Consensus 418 vLvV~G~~D~IvP~~sa~~l~~~i~~--~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 418 VYIIATREDHIAPWQSAYRGAALLGG--PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred EEEEeeCCCCcCCHHHHHHHHHHCCC--CEEEEECCCCCchHhhCCC
Confidence 9999999999983 45567777876 7888999999999998885
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-19 Score=150.07 Aligned_cols=236 Identities=12% Similarity=0.094 Sum_probs=137.1
Q ss_pred ccceeec-CCceeEEEEccC-----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC-CCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAI 93 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~~ 93 (348)
..+.+.+ +|.+|+-+..-+ ...++||++||++.+... + ...+..+.++||.|+.+|.||+ |.|+...
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~-~-----~~~A~~La~~G~~vLrfD~rg~~GeS~G~~ 83 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDH-F-----AGLAEYLSSNGFHVIRYDSLHHVGLSSGTI 83 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHH-H-----HHHHHHHHHCCCEEEEecCCCCCCCCCCcc
Confidence 4556666 455676554432 234789999999997532 2 1334567788999999999988 8886432
Q ss_pred CCCCCCCCHHHHHHHHHHHH---HHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVL---NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l---~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (348)
...++.....|+.+++ +..+.+++.|+||||||.+++..|... .++++|+.+|........... . .
T Consensus 84 ----~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~---~--~ 152 (307)
T PRK13604 84 ----DEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERA---L--G 152 (307)
T ss_pred ----ccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHh---h--h
Confidence 1233333355654444 334567899999999999987666533 499999988887753221110 0 0
Q ss_pred HHHhhccchhHHHHHHHhhhcccccCCCC-CCChHH-HHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEE
Q 018947 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQ-VPESDI-VQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i 248 (348)
.... .+......... .....+ ...+.......+. .......+.+.++++|+|+|
T Consensus 153 --~~~~------------~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~----------~~~~s~i~~~~~l~~PvLiI 208 (307)
T PRK13604 153 --YDYL------------SLPIDELPEDLDFEGHNLGSEVFVTDCFKHGW----------DTLDSTINKMKGLDIPFIAF 208 (307)
T ss_pred --cccc------------cCcccccccccccccccccHHHHHHHHHhcCc----------cccccHHHHHhhcCCCEEEE
Confidence 0000 00000000000 000000 0111100000000 00122334566788999999
Q ss_pred ecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 249 VGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 249 ~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
||++|.++ ..++.+.+.++..++++++++|++|... |++ -+++.|.+.+
T Consensus 209 HG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~-~~~----~~~~~~~~~~ 259 (307)
T PRK13604 209 TANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG-ENL----VVLRNFYQSV 259 (307)
T ss_pred EcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC-cch----HHHHHHHHHH
Confidence 99999999 4566788878755699999999999776 443 2455666654
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-19 Score=151.20 Aligned_cols=260 Identities=18% Similarity=0.198 Sum_probs=148.7
Q ss_pred CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018947 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
....+.|...+.. +|+|+++||++++...|.... ......... |+|+++|+||||.|. . . .+....+++
T Consensus 8 ~~~~~~~~~~~~~-~~~i~~~hg~~~~~~~~~~~~---~~~~~~~~~-~~~~~~d~~g~g~s~-~----~-~~~~~~~~~ 76 (282)
T COG0596 8 DGVRLAYREAGGG-GPPLVLLHGFPGSSSVWRPVF---KVLPALAAR-YRVIAPDLRGHGRSD-P----A-GYSLSAYAD 76 (282)
T ss_pred CCeEEEEeecCCC-CCeEEEeCCCCCchhhhHHHH---HHhhccccc-eEEEEecccCCCCCC-c----c-cccHHHHHH
Confidence 3445666666644 668999999999888775411 011122223 999999999999986 1 1 345566699
Q ss_pred HHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH------HHHHHHHHHHHHhhccchhH
Q 018947 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE------WLYNKVMSNLLYYYGMCGVV 181 (348)
Q Consensus 108 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 181 (348)
++..+++.++..+++++|||+||.+++.++.++|++++++|++++......... ....................
T Consensus 77 ~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
T COG0596 77 DLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAF 156 (282)
T ss_pred HHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhh
Confidence 999999999998999999999999999999999999999999997754110000 00000000000000000000
Q ss_pred HHHHHHh-hhcccccC----CCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC
Q 018947 182 KELLLKR-YFSKEVRG----NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (348)
Q Consensus 182 ~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~ 256 (348)
....... ++...... .................................. .+.......+++|+++++|++|.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~d~~~ 235 (282)
T COG0596 157 AALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLD-RDLRAALARITVPTLIIHGEDDPVV 235 (282)
T ss_pred hhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccc-cccchhhccCCCCeEEEecCCCCcC
Confidence 0000000 00000000 0000000011111100000000001111111111 0233456778899999999999555
Q ss_pred ch--HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 257 SE--AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 257 ~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+. ...+.+.++. ..++++++++||+++.++|+.+.+.+.+|++
T Consensus 236 ~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 236 PAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred CHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 43 3445555653 4789999999999999999999999888554
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-19 Score=150.47 Aligned_cols=207 Identities=11% Similarity=0.064 Sum_probs=117.9
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC-------CCHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV-------LSVDDLADQIAEVL 113 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~-------~~~~~~~~dl~~~l 113 (348)
..|+||++||++++...+. .....+...||.|+++|+||||.+.......... .+++++.+.+..+.
T Consensus 26 ~~p~vv~~HG~~~~~~~~~------~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 99 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYS------YFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIR 99 (249)
T ss_pred CCCEEEEeCCCCcccchHH------HHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999988765432 2234566779999999999999753211100000 11222222222222
Q ss_pred HH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhc
Q 018947 114 NH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (348)
Q Consensus 114 ~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (348)
+. ++.++++++|||+||.+++.++.++|+....++++++... ... . . ..+.
T Consensus 100 ~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-----~~~-----~-------------~----~~~~ 152 (249)
T PRK10566 100 EEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-----TSL-----A-------------R----TLFP 152 (249)
T ss_pred hcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-----HHH-----H-------------H----Hhcc
Confidence 22 3447899999999999999999988864444444433110 000 0 0 0000
Q ss_pred ccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccC-CccEEEEecCCCCCCc--hHHHHHHhhcc
Q 018947 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFVGESSPFHS--EAVHMTSKIDR 268 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~g~~D~~~~--~~~~~~~~~~~ 268 (348)
+.... .+..... .......... .+....+.++ ++|+|+++|++|.+++ ....+.+.+..
T Consensus 153 ~~~~~-----~~~~~~~------------~~~~~~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~ 214 (249)
T PRK10566 153 PLIPE-----TAAQQAE------------FNNIVAPLAE-WEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRE 214 (249)
T ss_pred ccccc-----ccccHHH------------HHHHHHHHhh-cChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 00000 0000000 0001111111 2333445565 6999999999999993 55567777765
Q ss_pred CC----cEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 269 RY----SALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 269 ~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+ .+++.++++||... + ...+.+.+||++.
T Consensus 215 ~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 215 RGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred cCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 32 57778999999764 3 4678888898764
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=144.44 Aligned_cols=183 Identities=13% Similarity=0.069 Sum_probs=117.9
Q ss_pred CeEEEeCCCCCChhhhccccccchhhhhhc---cCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018947 43 PALVTYPDLALNYMSCFQGLFFCPEACSLL---LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (348)
Q Consensus 43 p~vvllHG~~~~~~~~~~~~~~~~~~~~~~---~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~ 119 (348)
|+|||+||++++..+|.... +...+ ..+|+|+++|+|||| +++++++.+++++++.+
T Consensus 2 p~illlHGf~ss~~~~~~~~-----~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~ 61 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATL-----LKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGD 61 (190)
T ss_pred CeEEEECCCCCCcchHHHHH-----HHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCC
Confidence 68999999999998764322 02322 248999999999984 36788999999999999
Q ss_pred ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCC
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQ 199 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (348)
+++++||||||.+++.+|.++|. ++|+++|.... .... ... .+.. .......
T Consensus 62 ~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~---~~~~-----~~~---~~~~-----------~~~~~~~--- 113 (190)
T PRK11071 62 PLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRP---FELL-----TDY---LGEN-----------ENPYTGQ--- 113 (190)
T ss_pred CeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCH---HHHH-----HHh---cCCc-----------ccccCCC---
Confidence 99999999999999999999983 46888886551 1100 000 0000 0000000
Q ss_pred CCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEec
Q 018947 200 VPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQ 277 (348)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~ 277 (348)
.-.+...+ ...... .+... +. ..+|+++++|++|.+++ .+.++.+ + ++.++++
T Consensus 114 --~~~~~~~~------------~~d~~~----~~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~---~--~~~~~~~ 168 (190)
T PRK11071 114 --QYVLESRH------------IYDLKV----MQIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYA---A--CRQTVEE 168 (190)
T ss_pred --cEEEcHHH------------HHHHHh----cCCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHH---h--cceEEEC
Confidence 00000011 001111 11111 32 67789999999999994 3334444 3 5677889
Q ss_pred CCCCCccccChhhhHHHHHHHHh
Q 018947 278 ACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 278 ~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+++|.. ...+++.+.|.+|++
T Consensus 169 ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 169 GGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CCCcch--hhHHHhHHHHHHHhc
Confidence 999976 445889999999975
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-18 Score=144.45 Aligned_cols=272 Identities=14% Similarity=0.141 Sum_probs=172.6
Q ss_pred CceeEEEEccCC---CCCeEEEeCCCCCChhhhccc----cccchhh----hhhccCCeEEEEeCCCCCC-CCCCCCCC-
Q 018947 29 HGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQG----LFFCPEA----CSLLLHNFCIYHINPPGHE-FGAAAISD- 95 (348)
Q Consensus 29 ~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~----~~~~~~~----~~~~~~g~~vi~~D~~G~G-~S~~~~~~- 95 (348)
+..+.|.++|.- ...+||++||+.+++...... .-||..+ ..+-...|.||+.|..|.+ .|..|...
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 447899999963 356899999999965432100 0122111 1223346999999999976 34433221
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHcCCCcee-EEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH
Q 018947 96 --------DEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 96 --------~~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (348)
....+++.|+++.-..++++||++++. +||-||||+.+++++..||++|++++.+++......+.......
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~ 194 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEV 194 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHH
Confidence 235689999999889999999999986 99999999999999999999999999999877765443221111
Q ss_pred HHHH-----------------------HHHhhccchhHHHHHHHhhhcccccCCCCCC--ChHHHHHHHHH-----Hhhh
Q 018947 167 VMSN-----------------------LLYYYGMCGVVKELLLKRYFSKEVRGNAQVP--ESDIVQACRRL-----LDER 216 (348)
Q Consensus 167 ~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~ 216 (348)
.... ..+..++..+..+..+...|+.......... .....+.+.+. +.+.
T Consensus 195 ~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rf 274 (368)
T COG2021 195 QRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARF 274 (368)
T ss_pred HHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhcc
Confidence 1000 0111111111112223333333221111100 01223333322 2223
Q ss_pred chhhHHHHHHHHc------CCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEec-CCCCCccccC
Q 018947 217 QSSNVWHFLEAIN------GRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQ-ACGSMVTEEQ 287 (348)
Q Consensus 217 ~~~~~~~~~~~~~------~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~ 287 (348)
+...+....+.+. .+.++.+.+.++++|+|++.-+.|.+++ ..+++.+.++..+. +++++ ..||..++..
T Consensus 275 DaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S~~GHDaFL~e 353 (368)
T COG2021 275 DANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDSPYGHDAFLVE 353 (368)
T ss_pred CcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecCCCCchhhhcc
Confidence 4555555544432 2234556699999999999999999984 55678888988544 65554 5899999988
Q ss_pred hhhhHHHHHHHHhh
Q 018947 288 PHAMLIPMEYFLMG 301 (348)
Q Consensus 288 p~~~~~~i~~fl~~ 301 (348)
.+.+...|..||+.
T Consensus 354 ~~~~~~~i~~fL~~ 367 (368)
T COG2021 354 SEAVGPLIRKFLAL 367 (368)
T ss_pred hhhhhHHHHHHhhc
Confidence 89999999999975
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.3e-18 Score=167.43 Aligned_cols=251 Identities=10% Similarity=0.034 Sum_probs=145.2
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---cC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---FG 117 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---l~ 117 (348)
.+++|||+||++.+...|.... -.+.+..+.++||+|+++|+ |.++.+. .....++.+++..+.+.++. +.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~-~~s~v~~L~~~g~~v~~~d~---G~~~~~~--~~~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTR-DDGAVGILHRAGLDPWVIDF---GSPDKVE--GGMERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCCCccceecCC-cccHHHHHHHCCCEEEEEcC---CCCChhH--cCccCCHHHHHHHHHHHHHHHHHhh
Confidence 5689999999999988775331 11123456678999999994 5565431 12246888888777776654 34
Q ss_pred CCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCCC-----hHHHH-HH--HHHH-HHHHhhccch--------
Q 018947 118 LGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPS-----WTEWL-YN--KVMS-NLLYYYGMCG-------- 179 (348)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~-----~~~~~-~~--~~~~-~~~~~~~~~~-------- 179 (348)
.++++++||||||.+++.+++.+ +++|+++|++++...... ..... .. .... ..+.......
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 219 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQ 219 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHH
Confidence 57899999999999999998755 568999999888754211 00000 00 0000 0000000000
Q ss_pred ----h--HH--HHHHHhhhcccccCCCCCCChHHHHHHHHHH--hhhchhhHHHHHHHHcC-------CccH---Hhhhc
Q 018947 180 ----V--VK--ELLLKRYFSKEVRGNAQVPESDIVQACRRLL--DERQSSNVWHFLEAING-------RPDI---SEGLR 239 (348)
Q Consensus 180 ----~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~---~~~l~ 239 (348)
. .. ..+...+..+.... ..+....+.... ...........+..+.. .... ...+.
T Consensus 220 ~l~p~~~~~~~~~~~~~l~~~~~~~-----~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~ 294 (994)
T PRK07868 220 MLDPVKTAKARVDFLRQLHDREALL-----PREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLA 294 (994)
T ss_pred hcChhHHHHHHHHHHHhcCchhhhc-----cchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchh
Confidence 0 00 00111111111100 111111111111 01111112222222211 0011 12478
Q ss_pred cCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEE-EEecCCCCCccc---cChhhhHHHHHHHHhhccc
Q 018947 240 KLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSAL-VEVQACGSMVTE---EQPHAMLIPMEYFLMGYGL 304 (348)
Q Consensus 240 ~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---e~p~~~~~~i~~fl~~~~~ 304 (348)
++++|+|+|+|++|.+++ ....+.+.+++ .++ ++++++||+.++ ..++++...|.+||++...
T Consensus 295 ~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~--a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 295 DITCPVLAFVGEVDDIGQPASVRGIRRAAPN--AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 999999999999999983 45568888887 776 677899999877 4778899999999998753
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-17 Score=140.42 Aligned_cols=278 Identities=14% Similarity=0.159 Sum_probs=159.0
Q ss_pred CCCCCCccceeec-CCceeEEEEccC---------CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCC
Q 018947 15 TPPPSGKDNLIKT-SHGSLSVTIYGD---------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP 84 (348)
Q Consensus 15 ~~~~~~~~~~v~~-~~~~l~~~~~g~---------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 84 (348)
...+..++..+++ +||.+.+...-+ ...|+||++||+.+++...+-. ..+..+..+||+|++++.|
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr----~lv~~a~~~G~r~VVfN~R 163 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVR----HLVHEAQRKGYRVVVFNHR 163 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHH----HHHHHHHhCCcEEEEECCC
Confidence 3455667778877 677776665411 2569999999998887664321 2335667889999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCC---cceEEEecCCCCCCChHH
Q 018947 85 GHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR---VLGLILVSPLCKAPSWTE 161 (348)
Q Consensus 85 G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~---v~~lvl~~~~~~~~~~~~ 161 (348)
|+|.|.-..+..+.....+|+.+.+..+.+.+...++..+|.||||++.+.|..+..++ +.++.+++|.-.... .
T Consensus 164 G~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~--~ 241 (409)
T KOG1838|consen 164 GLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA--S 241 (409)
T ss_pred CCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh--h
Confidence 99988766555555666777777777777777778999999999999999999976553 555555555443200 0
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHh---hhcccccCCCCCCChHHHHHHHHHHhh--hchhhHHHHHHHHcCCccHHh
Q 018947 162 WLYNKVMSNLLYYYGMCGVVKELLLKR---YFSKEVRGNAQVPESDIVQACRRLLDE--RQSSNVWHFLEAINGRPDISE 236 (348)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 236 (348)
+.........+....+...+.+.+..+ ++......+.......+ ..+-+.+.. .+-.....++ .......
T Consensus 242 ~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~Sv-reFD~~~t~~~~gf~~~deYY----~~aSs~~ 316 (409)
T KOG1838|consen 242 RSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSV-REFDEALTRPMFGFKSVDEYY----KKASSSN 316 (409)
T ss_pred hHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcH-HHHHhhhhhhhcCCCcHHHHH----hhcchhh
Confidence 000000000000000100000001100 11111000000001111 111111100 1111222222 2245566
Q ss_pred hhccCCccEEEEecCCCCCCch-HHHHHHhhccCCcEEEEecCCCCCccccC----hhh-hHHHHHHHHhhcc
Q 018947 237 GLRKLQCRSLIFVGESSPFHSE-AVHMTSKIDRRYSALVEVQACGSMVTEEQ----PHA-MLIPMEYFLMGYG 303 (348)
Q Consensus 237 ~l~~i~~Pvl~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~----p~~-~~~~i~~fl~~~~ 303 (348)
.+.+|++|+|+|++.+|++++. ..-..+...+++.-+++-..+||..++|. +.. +.+.+.+|+....
T Consensus 317 ~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 317 YVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred hcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 7889999999999999999943 33333333444488888889999999875 222 3344777777653
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-18 Score=141.14 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=93.4
Q ss_pred ceeecCCceeEEEEccC---CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
.+++...+.+....+.+ ..+++|||+||++.+...+. .+|...+..+...||+|+++|+||||.|... ...
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~--~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~----~~~ 76 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSR--RMVALQARAFAAGGFGVLQIDLYGCGDSAGD----FAA 76 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchh--HHHHHHHHHHHHCCCEEEEECCCCCCCCCCc----ccc
Confidence 35566666655444432 23578999999986533221 1122333455568999999999999998643 123
Q ss_pred CCHHHHHHHHHHHH---HHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 100 LSVDDLADQIAEVL---NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 100 ~~~~~~~~dl~~~l---~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
.+++++++|+.+++ ++.+..+++++||||||.+++.+|.++|++++++|+++|.....
T Consensus 77 ~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 77 ARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 57788888877654 55567899999999999999999999999999999999876643
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=136.41 Aligned_cols=263 Identities=13% Similarity=0.100 Sum_probs=143.4
Q ss_pred CCCccceeecCCc-eeEEEEcc---CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHG-SLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 18 ~~~~~~~v~~~~~-~l~~~~~g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
+.-+++.+.+.+| .+-..... ++.+|.||++||+.++..+.+-. ..+..+.++||.|+++|.||||.+....
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r----~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~ 122 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYAR----GLMRALSRRGWLVVVFHFRGCSGEANTS 122 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHH----HHHHHHHhcCCeEEEEecccccCCcccC
Confidence 3345556777444 33333322 24678999999999988765422 2345677889999999999999876543
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCC--CcceEEEecCCCCCCChHH--------HH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKAPSWTE--------WL 163 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~--------~~ 163 (348)
+........+|++.-+..+.+.....++..||.|+||.+...+..+..+ .+.+.+.++.+........ ..
T Consensus 123 p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~l 202 (345)
T COG0429 123 PRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRL 202 (345)
T ss_pred cceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhh
Confidence 3333333344554444444444566899999999999555556555443 3556565554443211100 11
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHH--HHhhh---------chhhHHHHHHHHcCCc
Q 018947 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRR--LLDER---------QSSNVWHFLEAINGRP 232 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~ 232 (348)
....+...+.. .+ ..-+..+ .+.. .....+.++. .+.+. +-.....|++. .
T Consensus 203 y~r~l~~~L~~-----~~-~~kl~~l-~~~~-------p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~----a 264 (345)
T COG0429 203 YSRYLLRNLKR-----NA-ARKLKEL-EPSL-------PGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQ----A 264 (345)
T ss_pred hHHHHHHHHHH-----HH-HHHHHhc-Cccc-------CcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHh----c
Confidence 11111110000 00 0000000 0000 1111222111 00000 11122222222 2
Q ss_pred cHHhhhccCCccEEEEecCCCCCCch-HHHHHHhhccCCcEEEEecCCCCCcccc----Chh-hhHHHHHHHHhhc
Q 018947 233 DISEGLRKLQCRSLIFVGESSPFHSE-AVHMTSKIDRRYSALVEVQACGSMVTEE----QPH-AMLIPMEYFLMGY 302 (348)
Q Consensus 233 ~~~~~l~~i~~Pvl~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e----~p~-~~~~~i~~fl~~~ 302 (348)
.....+.+|.+|+|+|++.+|++++. .........++++.+...+.+||..++. +|. ...+.+.+||+..
T Consensus 265 Ss~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 265 SSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred cccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 33456889999999999999999832 2222222133458899999999998886 443 5667888888765
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-15 Score=122.09 Aligned_cols=231 Identities=13% Similarity=0.151 Sum_probs=141.5
Q ss_pred eEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC-cee
Q 018947 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG-AVM 122 (348)
Q Consensus 44 ~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~v~ 122 (348)
+||-+||.++++.+... + ...+...|.|+|.+++||+|.+..+ ....++-.+-...+.++++.++++ +++
T Consensus 37 TVv~~hGsPGSH~DFkY-i-----~~~l~~~~iR~I~iN~PGf~~t~~~---~~~~~~n~er~~~~~~ll~~l~i~~~~i 107 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKY-I-----RPPLDEAGIRFIGINYPGFGFTPGY---PDQQYTNEERQNFVNALLDELGIKGKLI 107 (297)
T ss_pred eEEEecCCCCCccchhh-h-----hhHHHHcCeEEEEeCCCCCCCCCCC---cccccChHHHHHHHHHHHHHcCCCCceE
Confidence 89999999999987521 2 1355678999999999999998754 245689999999999999999984 688
Q ss_pred EEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC--hHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCC
Q 018947 123 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQV 200 (348)
Q Consensus 123 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
++|||.|+-.|+.+|..+| +.++++++|....+- ............+... +...+.+.++..++..-.... .
T Consensus 108 ~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~--lp~~~~~~i~~~~y~~iG~KV--~ 181 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDL--LPRFIINAIMYFYYRMIGFKV--S 181 (297)
T ss_pred EEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHhCeee--c
Confidence 9999999999999999995 679999999886531 1110001111111110 111111222222111110000 0
Q ss_pred CChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhc-----------
Q 018947 201 PESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKID----------- 267 (348)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~----------- 267 (348)
..++....++. +...+-... ....+.+.+-++|+++++|.+|.+++ ...+.+..+.
T Consensus 182 ~GeeA~na~r~-m~~~df~~q----------~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~ 250 (297)
T PF06342_consen 182 DGEEAINAMRS-MQNCDFEEQ----------KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEI 250 (297)
T ss_pred ChHHHHHHHHH-HHhcCHHHH----------HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCC
Confidence 01111111111 111111111 22334455667899999999998872 2222222221
Q ss_pred --------------cCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 268 --------------RRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 268 --------------~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+.....+.+.+.||+.+-.+++-+++.+...|+
T Consensus 251 seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 251 SEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred ChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 112346677889999999999999999887663
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.3e-17 Score=124.43 Aligned_cols=143 Identities=20% Similarity=0.269 Sum_probs=102.9
Q ss_pred eEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeE
Q 018947 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMC 123 (348)
Q Consensus 44 ~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~l 123 (348)
+||++||++.+...+. .....+.++||.|+++|+||+|.+.. ....+++.+++. .+..+.+++.+
T Consensus 1 ~vv~~HG~~~~~~~~~------~~~~~l~~~G~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~i~l 65 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQ------PLAEALAEQGYAVVAFDYPGHGDSDG-------ADAVERVLADIR--AGYPDPDRIIL 65 (145)
T ss_dssp EEEEECTTTTTTHHHH------HHHHHHHHTTEEEEEESCTTSTTSHH-------SHHHHHHHHHHH--HHHCTCCEEEE
T ss_pred CEEEECCCCCCHHHHH------HHHHHHHHCCCEEEEEecCCCCccch-------hHHHHHHHHHHH--hhcCCCCcEEE
Confidence 5899999999876542 23357778899999999999987631 112333333322 11236789999
Q ss_pred EEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCCh
Q 018947 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203 (348)
Q Consensus 124 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (348)
+|||+||.+++.++.++ .+|+++|++++...
T Consensus 66 ~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~------------------------------------------------ 96 (145)
T PF12695_consen 66 IGHSMGGAIAANLAARN-PRVKAVVLLSPYPD------------------------------------------------ 96 (145)
T ss_dssp EEETHHHHHHHHHHHHS-TTESEEEEESESSG------------------------------------------------
T ss_pred EEEccCcHHHHHHhhhc-cceeEEEEecCccc------------------------------------------------
Confidence 99999999999999998 78999999988200
Q ss_pred HHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCC
Q 018947 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGS 281 (348)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH 281 (348)
.+.+...++|+++++|++|.++ +....+.+.++ ...+++++++++|
T Consensus 97 -------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H 144 (145)
T PF12695_consen 97 -------------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGH 144 (145)
T ss_dssp -------------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-T
T ss_pred -------------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcC
Confidence 0001233459999999999998 35556777777 3589999999999
Q ss_pred C
Q 018947 282 M 282 (348)
Q Consensus 282 ~ 282 (348)
+
T Consensus 145 ~ 145 (145)
T PF12695_consen 145 F 145 (145)
T ss_dssp T
T ss_pred c
Confidence 5
|
... |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.71 E-value=3e-15 Score=127.02 Aligned_cols=126 Identities=10% Similarity=0.090 Sum_probs=85.1
Q ss_pred cCCceeEEEEccC-----CCCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCC--CCCCCCCCCC-----
Q 018947 27 TSHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINP--PGHEFGAAAI----- 93 (348)
Q Consensus 27 ~~~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~--~G~G~S~~~~----- 93 (348)
..+..+.|..+-+ ...|+|+|+||++++...|.... .+..++ ..|+.|+++|. +|+|.+....
T Consensus 22 ~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~----~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g 97 (275)
T TIGR02821 22 TCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKA----GAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFG 97 (275)
T ss_pred ccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhh----HHHHHHhhcCcEEEEeCCCCCcCCCCCCccccccc
Confidence 3455656666543 24689999999999887763211 112333 35899999998 5555332100
Q ss_pred -----------CCCCCCCCHHH-HHHHHHHHHHH---cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 94 -----------SDDEPVLSVDD-LADQIAEVLNH---FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 94 -----------~~~~~~~~~~~-~~~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
.+....+...+ +++++..++++ ++.+++.++||||||.+++.++.++|+.+++++++++....
T Consensus 98 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 98 KGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAP 175 (275)
T ss_pred CCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCc
Confidence 00001223333 46788888876 35578999999999999999999999999999999887653
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-15 Score=126.17 Aligned_cols=205 Identities=10% Similarity=0.115 Sum_probs=121.8
Q ss_pred CCceeEEEEccC-----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCC-----CCC------
Q 018947 28 SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF-----GAA------ 91 (348)
Q Consensus 28 ~~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~-----S~~------ 91 (348)
-+..+.|.++=+ ...|+|+|+||++++...|.... .....+...|+.|+.+|..++|. +..
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~---~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~ 104 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKS---GAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVG 104 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhh---hHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCC
Confidence 455667766522 35689999999998876653211 11122334699999999887761 100
Q ss_pred -------CCCC----CCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH
Q 018947 92 -------AISD----DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (348)
Q Consensus 92 -------~~~~----~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (348)
.... ....+-.+++.+.+....+.++.++++++||||||..++.++.++|+++++++.+++........
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~ 184 (283)
T PLN02442 105 AGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP 184 (283)
T ss_pred cceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc
Confidence 0000 00011234444455555555677899999999999999999999999999999998876532110
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhcc
Q 018947 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240 (348)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 240 (348)
+. ...+..+++.. .+..+. . ........+..
T Consensus 185 -~~-------------------~~~~~~~~g~~---------~~~~~~-------~-------------d~~~~~~~~~~ 215 (283)
T PLN02442 185 -WG-------------------QKAFTNYLGSD---------KADWEE-------Y-------------DATELVSKFND 215 (283)
T ss_pred -hh-------------------hHHHHHHcCCC---------hhhHHH-------c-------------Chhhhhhhccc
Confidence 00 00011111110 000000 0 00112222345
Q ss_pred CCccEEEEecCCCCCCch---HHHHHHhhccC--CcEEEEecCCCCCcc
Q 018947 241 LQCRSLIFVGESSPFHSE---AVHMTSKIDRR--YSALVEVQACGSMVT 284 (348)
Q Consensus 241 i~~Pvl~i~g~~D~~~~~---~~~~~~~~~~~--~~~~~~~~~~gH~~~ 284 (348)
.++|+++++|++|.+++. ...+.+.+... ..+++++++++|..+
T Consensus 216 ~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 216 VSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred cCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 678999999999988742 44555554432 278999999999755
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-15 Score=119.65 Aligned_cols=210 Identities=16% Similarity=0.143 Sum_probs=132.3
Q ss_pred cceeecCCceeEEE--EccCCC-CCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVT--IYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDE 97 (348)
Q Consensus 22 ~~~v~~~~~~l~~~--~~g~~~-~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~ 97 (348)
...+.+..+..-.. ...+.. .++|+++||....-......+ ..+.. -+++|+++|++|+|.|.....
T Consensus 37 v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~------~~l~~~ln~nv~~~DYSGyG~S~G~ps--- 107 (258)
T KOG1552|consen 37 VFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELF------KELSIFLNCNVVSYDYSGYGRSSGKPS--- 107 (258)
T ss_pred eEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHHHHHHH------HHHhhcccceEEEEecccccccCCCcc---
Confidence 33445544433222 223333 589999999854433211111 22222 289999999999999875422
Q ss_pred CCCCHHHHHHHHHHHHHHcC-CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhc
Q 018947 98 PVLSVDDLADQIAEVLNHFG-LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 98 ~~~~~~~~~~dl~~~l~~l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (348)
+.-..+|.-...+.+.+..| .++++|+|+|+|...++.+|++.| ++++||.+|...... .
T Consensus 108 E~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r--------v--------- 168 (258)
T KOG1552|consen 108 ERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR--------V--------- 168 (258)
T ss_pred cccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhh--------h---------
Confidence 22223333323333334453 578999999999999999999998 999999988655310 0
Q ss_pred cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC
Q 018947 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~ 256 (348)
+...-+.. .. . +.....+.++.++||+|+++|++|.++
T Consensus 169 --------~~~~~~~~-~~----------~-----------------------d~f~~i~kI~~i~~PVLiiHgtdDevv 206 (258)
T KOG1552|consen 169 --------AFPDTKTT-YC----------F-----------------------DAFPNIEKISKITCPVLIIHGTDDEVV 206 (258)
T ss_pred --------hccCcceE-Ee----------e-----------------------ccccccCcceeccCCEEEEecccCcee
Confidence 00000000 00 0 001114456788999999999999998
Q ss_pred --chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 257 --SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
.....+.+..+++ .+-.++.++||.-. +...++.+.+..|+....
T Consensus 207 ~~sHg~~Lye~~k~~-~epl~v~g~gH~~~-~~~~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 207 DFSHGKALYERCKEK-VEPLWVKGAGHNDI-ELYPEYIEHLRRFISSVL 253 (258)
T ss_pred cccccHHHHHhcccc-CCCcEEecCCCccc-ccCHHHHHHHHHHHHHhc
Confidence 4666788888863 46777889999554 666678899999988763
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-14 Score=115.35 Aligned_cols=221 Identities=14% Similarity=0.116 Sum_probs=137.5
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HcCC
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN-HFGL 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~-~l~~ 118 (348)
.....++++|=.|++...+ ..+ ...+.....++++++||+|.-- ......+++++++.+..-+. -+.-
T Consensus 5 ~~~~~L~cfP~AGGsa~~f-r~W------~~~lp~~iel~avqlPGR~~r~----~ep~~~di~~Lad~la~el~~~~~d 73 (244)
T COG3208 5 GARLRLFCFPHAGGSASLF-RSW------SRRLPADIELLAVQLPGRGDRF----GEPLLTDIESLADELANELLPPLLD 73 (244)
T ss_pred CCCceEEEecCCCCCHHHH-HHH------HhhCCchhheeeecCCCccccc----CCcccccHHHHHHHHHHHhccccCC
Confidence 3556789998888876543 222 2445557999999999998532 22346789999999988887 3445
Q ss_pred CceeEEEeChhHHHHHHHHHhCCC---CcceEEEecCCCCCCCh----HHHHHHHHHHHHHHhhccchhHHHHHHHhhhc
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSW----TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (348)
+++.++||||||++|.++|.+... .+.++.+.+........ ........+..+....++...+
T Consensus 74 ~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~---------- 143 (244)
T COG3208 74 APFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPEL---------- 143 (244)
T ss_pred CCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHH----------
Confidence 789999999999999999986532 36677776644431110 0000011122222222322111
Q ss_pred ccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccC
Q 018947 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR 269 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~ 269 (348)
.. ++++.+.+.-.++ +.+..+..+ .+.. -..++||+.++.|++|..+ .....+.+...+
T Consensus 144 ---le-----d~El~~l~LPilR--------AD~~~~e~Y-~~~~-~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~- 204 (244)
T COG3208 144 ---LE-----DPELMALFLPILR--------ADFRALESY-RYPP-PAPLACPIHAFGGEKDHEVSRDELGAWREHTKG- 204 (244)
T ss_pred ---hc-----CHHHHHHHHHHHH--------HHHHHhccc-ccCC-CCCcCcceEEeccCcchhccHHHHHHHHHhhcC-
Confidence 10 3444444332221 111211111 1111 1578999999999999998 333345555553
Q ss_pred CcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 270 YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 270 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
..++++++ +||+...++.+++.+.|.+.+..
T Consensus 205 ~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 205 DFTLRVFD-GGHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred CceEEEec-CcceehhhhHHHHHHHHHHHhhh
Confidence 48899996 99999999999999999998854
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-15 Score=123.74 Aligned_cols=189 Identities=15% Similarity=0.140 Sum_probs=112.5
Q ss_pred hhhccCCeEEEEeCCCCCCCCCCCC----CCCCCCCCHHHHHHHHHHHHHHc--CCCceeEEEeChhHHHHHHHHHhCCC
Q 018947 69 CSLLLHNFCIYHINPPGHEFGAAAI----SDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRH 142 (348)
Q Consensus 69 ~~~~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (348)
..+.++||.|+.+|+||.+...... ........++|..+.+..+++.. +.+++.++|||+||.+++.++.++|+
T Consensus 8 ~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~ 87 (213)
T PF00326_consen 8 QLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPD 87 (213)
T ss_dssp HHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCC
T ss_pred HHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccce
Confidence 3455899999999999987322110 01112233444444445454442 34789999999999999999999999
Q ss_pred CcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHH
Q 018947 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVW 222 (348)
Q Consensus 143 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (348)
+++++|..++............. .. ......+ ..... ..+....
T Consensus 88 ~f~a~v~~~g~~d~~~~~~~~~~--------------~~-~~~~~~~-~~~~~------~~~~~~~-------------- 131 (213)
T PF00326_consen 88 RFKAAVAGAGVSDLFSYYGTTDI--------------YT-KAEYLEY-GDPWD------NPEFYRE-------------- 131 (213)
T ss_dssp GSSEEEEESE-SSTTCSBHHTCC--------------HH-HGHHHHH-SSTTT------SHHHHHH--------------
T ss_pred eeeeeeccceecchhcccccccc--------------cc-ccccccc-Cccch------hhhhhhh--------------
Confidence 99999999987765432211100 00 0000000 00000 0111100
Q ss_pred HHHHHHcCCccHHhhhcc--CCccEEEEecCCCCCC--chHHHHHHhhccCC--cEEEEecCCCCCccc-cChhhhHHHH
Q 018947 223 HFLEAINGRPDISEGLRK--LQCRSLIFVGESSPFH--SEAVHMTSKIDRRY--SALVEVQACGSMVTE-EQPHAMLIPM 295 (348)
Q Consensus 223 ~~~~~~~~~~~~~~~l~~--i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-e~p~~~~~~i 295 (348)
.. ....+.+ +++|+|+++|++|..+ ..+..+.+.+...+ .+++++|++||.... +...+..+.+
T Consensus 132 --~s-------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~ 202 (213)
T PF00326_consen 132 --LS-------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERI 202 (213)
T ss_dssp --HH-------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHH
T ss_pred --hc-------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHH
Confidence 00 1111233 7899999999999998 45556666666533 889999999995553 5556788899
Q ss_pred HHHHhhc
Q 018947 296 EYFLMGY 302 (348)
Q Consensus 296 ~~fl~~~ 302 (348)
.+||++.
T Consensus 203 ~~f~~~~ 209 (213)
T PF00326_consen 203 LDFFDKY 209 (213)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.9e-15 Score=112.42 Aligned_cols=217 Identities=15% Similarity=0.135 Sum_probs=132.8
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC-
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG- 119 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~- 119 (348)
....+|++||+-++........ .+..+...|+.++.+|++|.|+|.... ..-.....++|+..+++++...
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~----vA~~~e~~gis~fRfDF~GnGeS~gsf----~~Gn~~~eadDL~sV~q~~s~~n 103 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKN----VAKALEKEGISAFRFDFSGNGESEGSF----YYGNYNTEADDLHSVIQYFSNSN 103 (269)
T ss_pred CceEEEEeeccccccchHHHHH----HHHHHHhcCceEEEEEecCCCCcCCcc----ccCcccchHHHHHHHHHHhccCc
Confidence 6678999999988876543222 334556679999999999999997542 2234445569999999988643
Q ss_pred c--eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH-HHHHHHHHHHHHhhccchhHHHHHHHhhhcccccC
Q 018947 120 A--VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE-WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRG 196 (348)
Q Consensus 120 ~--v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (348)
+ -+++|||-||.+++.+|.++++ ++-+|-++.-........ +.....+ ++....-|-.....
T Consensus 104 r~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l--------------~~ike~Gfid~~~r 168 (269)
T KOG4667|consen 104 RVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYL--------------ERIKEQGFIDVGPR 168 (269)
T ss_pred eEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHH--------------HHHHhCCceecCcc
Confidence 2 3689999999999999999987 777776665554433221 1111111 11111111110000
Q ss_pred CCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhc--cCCccEEEEecCCCCCC--chHHHHHHhhccCCcE
Q 018947 197 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR--KLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSA 272 (348)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~ 272 (348)
..........+... ..+. .+..+... ..+||||-++|..|.++ ..+.++++.+++ .+
T Consensus 169 kG~y~~rvt~eSlm------------drLn-----td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n--H~ 229 (269)
T KOG4667|consen 169 KGKYGYRVTEESLM------------DRLN-----TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN--HK 229 (269)
T ss_pred cCCcCceecHHHHH------------HHHh-----chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC--Cc
Confidence 00000000111111 1111 12222222 34799999999999999 577789999998 89
Q ss_pred EEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 273 LVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 273 ~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+.++||+.|..... ..+.+.....|.+
T Consensus 230 L~iIEgADHnyt~~-q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 230 LEIIEGADHNYTGH-QSQLVSLGLEFIK 256 (269)
T ss_pred eEEecCCCcCccch-hhhHhhhcceeEE
Confidence 99999999976543 3344444444443
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-14 Score=136.16 Aligned_cols=232 Identities=16% Similarity=0.114 Sum_probs=141.2
Q ss_pred ccceeec-CCceeEEEEccC----CC--CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCC--
Q 018947 21 KDNLIKT-SHGSLSVTIYGD----QD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-- 91 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~----~~--~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~-- 91 (348)
+...+.. +|.+++...+-+ +. -|+||++||.+.....+. +......+...||.|+.+|+||.+.-..
T Consensus 366 e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~----~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F 441 (620)
T COG1506 366 EPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYS----FNPEIQVLASAGYAVLAPNYRGSTGYGREF 441 (620)
T ss_pred eEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccc----cchhhHHHhcCCeEEEEeCCCCCCccHHHH
Confidence 4455566 455887776543 11 289999999986655531 1133467788999999999998543110
Q ss_pred -C-CCCCCCCCCHHHHHHHHHHHHHHcCC---CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH
Q 018947 92 -A-ISDDEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 92 -~-~~~~~~~~~~~~~~~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (348)
. .........++|+.+.+. ++...+. +++.++|||+||++++..+.+.| ++++.+...+...-.. ..
T Consensus 442 ~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~---~~--- 513 (620)
T COG1506 442 ADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLL---YF--- 513 (620)
T ss_pred HHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhh---hc---
Confidence 0 011223456777777777 5555443 58999999999999998888887 6777766555443100 00
Q ss_pred HHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEE
Q 018947 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 246 (348)
.... ...++........ .....+.+. . ........++++|+|
T Consensus 514 --------~~~~-------~~~~~~~~~~~~~---~~~~~~~~~-------------------~-~sp~~~~~~i~~P~L 555 (620)
T COG1506 514 --------GEST-------EGLRFDPEENGGG---PPEDREKYE-------------------D-RSPIFYADNIKTPLL 555 (620)
T ss_pred --------cccc-------hhhcCCHHHhCCC---cccChHHHH-------------------h-cChhhhhcccCCCEE
Confidence 0000 0000000000000 000000010 0 123334568899999
Q ss_pred EEecCCCCCC--chHHHHHHhhccCC--cEEEEecCCCCCccc-cChhhhHHHHHHHHhhc
Q 018947 247 IFVGESSPFH--SEAVHMTSKIDRRY--SALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 247 ~i~g~~D~~~--~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 302 (348)
+|||+.|.-+ ..+..+.+.+...+ ++++++|+.+|.+.. ++...+.+.+.+|+++.
T Consensus 556 liHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 556 LIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred EEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 9999999988 46666777766533 789999999998776 55666778888888765
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-15 Score=116.38 Aligned_cols=215 Identities=13% Similarity=0.069 Sum_probs=138.3
Q ss_pred CCceeEEE-EccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH
Q 018947 28 SHGSLSVT-IYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (348)
Q Consensus 28 ~~~~l~~~-~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (348)
+..+++.+ .......|+++++||..++-.. +....| .-...-+.+|+.+++||+|.|... .+-+.+.
T Consensus 63 D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGh-r~~i~~----~fy~~l~mnv~ivsYRGYG~S~Gs-------psE~GL~ 130 (300)
T KOG4391|consen 63 DKVTLDAYLMLSESSRPTLLYFHANAGNMGH-RLPIAR----VFYVNLKMNVLIVSYRGYGKSEGS-------PSEEGLK 130 (300)
T ss_pred cceeEeeeeecccCCCceEEEEccCCCcccc-hhhHHH----HHHHHcCceEEEEEeeccccCCCC-------cccccee
Confidence 44566533 3344578999999998877432 211111 122244789999999999999744 2333333
Q ss_pred HHHHHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchh
Q 018947 107 DQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (348)
Q Consensus 107 ~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (348)
-|-.++++.+ +..+++++|-|.||++|+.+|+++.+++.++++-++....+...... + ..+
T Consensus 131 lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~--------v-----~p~ 197 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPL--------V-----FPF 197 (300)
T ss_pred ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhe--------e-----ccc
Confidence 4444444443 34689999999999999999999999999999988766543211000 0 000
Q ss_pred HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--h
Q 018947 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--E 258 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~ 258 (348)
. -..+..+ +.+ .. +.-...+.+...|.|+|.|.+|.++| .
T Consensus 198 ~-~k~i~~l-------------------c~k-----------n~-------~~S~~ki~~~~~P~LFiSGlkDelVPP~~ 239 (300)
T KOG4391|consen 198 P-MKYIPLL-------------------CYK-----------NK-------WLSYRKIGQCRMPFLFISGLKDELVPPVM 239 (300)
T ss_pred h-hhHHHHH-------------------HHH-----------hh-------hcchhhhccccCceEEeecCccccCCcHH
Confidence 0 0000100 000 00 01112234667899999999999994 3
Q ss_pred HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhccccC
Q 018947 259 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYR 306 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 306 (348)
.+.+.+..+....++..+|++.|.-.+- -+-..++|.+||.+.+...
T Consensus 240 Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~~~ 286 (300)
T KOG4391|consen 240 MRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVKSS 286 (300)
T ss_pred HHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhccCC
Confidence 4467888888778999999999965543 3568899999999987543
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-14 Score=118.29 Aligned_cols=177 Identities=12% Similarity=0.032 Sum_probs=104.9
Q ss_pred CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC-------CCCCCCCC---CHHHHHHH
Q 018947 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA-------ISDDEPVL---SVDDLADQ 108 (348)
Q Consensus 39 ~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~---~~~~~~~d 108 (348)
.+.+|+|||+||+|++...+.... ..+...++.+..++++|...+... ........ .+.+..+.
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~------~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~ 86 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIG------SWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPT 86 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHH------HHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHH
Confidence 356789999999999987764222 333334444455555554321100 00000011 12222233
Q ss_pred HHHH----HHHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHH
Q 018947 109 IAEV----LNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (348)
Q Consensus 109 l~~~----l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (348)
+.++ .+..++ ++++++|||+||.+++.++.++|+.+.+++.+++....
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-------------------------- 140 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-------------------------- 140 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------------------
Confidence 3333 334443 57999999999999999999999888877765431100
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHH
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAV 260 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~ 260 (348)
. .. ....+.|+++++|++|++++ ...
T Consensus 141 -----------~-------~~----------------------------------~~~~~~pvli~hG~~D~vvp~~~~~ 168 (232)
T PRK11460 141 -----------L-------PE----------------------------------TAPTATTIHLIHGGEDPVIDVAHAV 168 (232)
T ss_pred -----------c-------cc----------------------------------cccCCCcEEEEecCCCCccCHHHHH
Confidence 0 00 00125799999999999994 555
Q ss_pred HHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHH
Q 018947 261 HMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFL 299 (348)
Q Consensus 261 ~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 299 (348)
++.+.+... .+++++++++||.+..+.-+.+.+.+.++|
T Consensus 169 ~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 169 AAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred HHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 666666543 367888999999886544444444444444
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-13 Score=120.20 Aligned_cols=248 Identities=11% Similarity=0.044 Sum_probs=144.5
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCce
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v 121 (348)
.|+||++..+.++.... .++.+..++. |+.|+..|+.--+... ......+++|+++-+.++++++|.+ +
T Consensus 102 ~~pvLiV~Pl~g~~~~L-----~RS~V~~Ll~-g~dVYl~DW~~p~~vp----~~~~~f~ldDYi~~l~~~i~~~G~~-v 170 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATL-----LRSTVEALLP-DHDVYITDWVNARMVP----LSAGKFDLEDYIDYLIEFIRFLGPD-I 170 (406)
T ss_pred CCcEEEEcCCchHHHHH-----HHHHHHHHhC-CCcEEEEeCCCCCCCc----hhcCCCCHHHHHHHHHHHHHHhCCC-C
Confidence 37899998887665543 2355677777 9999999998776431 2235689999999999999999877 9
Q ss_pred eEEEeChhHHHHHHHHHhC-----CCCcceEEEecCCCCCCC---hHHHHHH-HHHHHHHHhh---------ccc-hhHH
Q 018947 122 MCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCKAPS---WTEWLYN-KVMSNLLYYY---------GMC-GVVK 182 (348)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~---~~~~~~~-~~~~~~~~~~---------~~~-~~~~ 182 (348)
+++|+|+||..++.+++.+ |++++++++++++..... ....... ..+....... +.. ...+
T Consensus 171 ~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~P 250 (406)
T TIGR01849 171 HVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYP 250 (406)
T ss_pred cEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccC
Confidence 9999999999988776654 667999999998877532 1111110 0000000000 000 0111
Q ss_pred HHHHHhhh---cc------------cccCCCCCCChHHHHHHHHHHh---hhchhhHHHHHHHHcCCccH----------
Q 018947 183 ELLLKRYF---SK------------EVRGNAQVPESDIVQACRRLLD---ERQSSNVWHFLEAINGRPDI---------- 234 (348)
Q Consensus 183 ~~~~~~~~---~~------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------- 234 (348)
..+....| .+ ...... ....+....+.+... ....+.+...++.+.....+
T Consensus 251 G~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd-~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~ 329 (406)
T TIGR01849 251 GFLQLAGFISMNLDRHTKAHSDFFLHLVKGD-GQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGK 329 (406)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHhcCC-cchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCE
Confidence 11111111 00 000000 000111111111111 11222333333332211111
Q ss_pred HhhhccCC-ccEEEEecCCCCCCc--hHHHHHHh---hccCCcEEEEecCCCCCcccc---ChhhhHHHHHHHHhh
Q 018947 235 SEGLRKLQ-CRSLIFVGESSPFHS--EAVHMTSK---IDRRYSALVEVQACGSMVTEE---QPHAMLIPMEYFLMG 301 (348)
Q Consensus 235 ~~~l~~i~-~Pvl~i~g~~D~~~~--~~~~~~~~---~~~~~~~~~~~~~~gH~~~~e---~p~~~~~~i~~fl~~ 301 (348)
.-.+++|+ +|+|.+.|++|.+++ ....+.+. ++..+.+.+..+++||+..+- .++++...|.+||.+
T Consensus 330 ~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 330 RVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred EecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 12478899 999999999999993 33344444 465556678888899988773 557888999999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.8e-15 Score=128.47 Aligned_cols=107 Identities=11% Similarity=0.108 Sum_probs=79.7
Q ss_pred CCCCeEEEeCCCCCCh--hhhccccccchhhhhhc--cCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 40 QDKPALVTYPDLALNY--MSCFQGLFFCPEACSLL--LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~--~~~~~~~~~~~~~~~~~--~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
+.+|++|++||++.+. ..|...+ ...++ ..+|+||++|++|+|.+..+. .......+++++.++++.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l-----~~al~~~~~d~nVI~VDw~g~g~s~y~~----a~~~t~~vg~~la~lI~~ 109 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKL-----VAALYEREPSANVIVVDWLSRAQQHYPT----SAAYTKLVGKDVAKFVNW 109 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHH-----HHHHHhccCCCEEEEEECCCcCCCCCcc----ccccHHHHHHHHHHHHHH
Confidence 5789999999998764 2232111 12333 236999999999999875431 123346677777777765
Q ss_pred c------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 116 F------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 116 l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+ +.++++|+||||||.+|..++.++|++|.++++++|...
T Consensus 110 L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 110 MQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 4 368999999999999999999999999999999999764
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.1e-14 Score=121.01 Aligned_cols=103 Identities=14% Similarity=0.051 Sum_probs=70.6
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHH-
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD---LADQIAEVLNH- 115 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~---~~~dl~~~l~~- 115 (348)
...|+|||+||++.+...|. ..+..+.+.||.|+++|++|++.+. ....+++ ..+++.+.++.
T Consensus 50 g~~PvVv~lHG~~~~~~~y~------~l~~~Las~G~~VvapD~~g~~~~~-------~~~~i~d~~~~~~~l~~~l~~~ 116 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYS------QLLQHIASHGFIVVAPQLYTLAGPD-------GTDEIKDAAAVINWLSSGLAAV 116 (313)
T ss_pred CCCCEEEEECCCCCCcccHH------HHHHHHHhCCCEEEEecCCCcCCCC-------chhhHHHHHHHHHHHHhhhhhh
Confidence 46689999999988754332 2335566779999999999975321 1122322 23333332222
Q ss_pred ------cCCCceeEEEeChhHHHHHHHHHhCCC-----CcceEEEecCCCC
Q 018947 116 ------FGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCK 155 (348)
Q Consensus 116 ------l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 155 (348)
.+.++++++|||+||.+++.+|.++++ +++++|+++|...
T Consensus 117 l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 117 LPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred cccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 234689999999999999999998874 5788998888654
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-13 Score=127.84 Aligned_cols=121 Identities=13% Similarity=0.134 Sum_probs=86.7
Q ss_pred CCceeEEEEcc---CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHH
Q 018947 28 SHGSLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (348)
Q Consensus 28 ~~~~l~~~~~g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 104 (348)
+|.+|++..+- ....|+||++||++.+...... . .......++++||.|+++|+||+|.|+... ..++ .+
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~-~-~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~----~~~~-~~ 77 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWG-L-DKTEPAWFVAQGYAVVIQDTRGRGASEGEF----DLLG-SD 77 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccc-c-ccccHHHHHhCCcEEEEEeccccccCCCce----EecC-cc
Confidence 56678766553 3456899999999876431000 0 001124567889999999999999997442 1122 45
Q ss_pred HHHHHHHHHHHcC-----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 105 LADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 105 ~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
.++|+.++++.+. ..++.++|||+||.+++.+|..+|++++++|..++...
T Consensus 78 ~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 78 EAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred cchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 6677777776553 25899999999999999999999999999999877654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-13 Score=118.69 Aligned_cols=237 Identities=10% Similarity=0.025 Sum_probs=130.6
Q ss_pred ccceeecCCceeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDE 97 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~ 97 (348)
+...+...++.+....+-+ ...|+||++||.|....+.. .+......+.. .|+.|+++|+|...+..
T Consensus 58 ~~~~i~~~~g~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~---~~~~~~~~la~~~g~~Vv~vdYrlape~~------- 127 (318)
T PRK10162 58 RAYMVPTPYGQVETRLYYPQPDSQATLFYLHGGGFILGNLD---THDRIMRLLASYSGCTVIGIDYTLSPEAR------- 127 (318)
T ss_pred EEEEEecCCCceEEEEECCCCCCCCEEEEEeCCcccCCCch---hhhHHHHHHHHHcCCEEEEecCCCCCCCC-------
Confidence 4445555566666665532 34689999999774321110 01112234444 49999999999764322
Q ss_pred CCCCHHHHHHH---HHHHHHHcCC--CceeEEEeChhHHHHHHHHHhC------CCCcceEEEecCCCCCCChHHHHHHH
Q 018947 98 PVLSVDDLADQ---IAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 98 ~~~~~~~~~~d---l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (348)
....++|..+. +.+..+.+++ ++++++|+|+||.+++.++.+. +.++++++++.+...........
T Consensus 128 ~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~--- 204 (318)
T PRK10162 128 FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRR--- 204 (318)
T ss_pred CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHH---
Confidence 12345554443 3333445654 5899999999999999988753 35799999998876542111000
Q ss_pred HHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEE
Q 018947 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 246 (348)
. ........ .....+.+.+.+.......... +.. .....+...-.|++
T Consensus 205 ~-----~~~~~~~l---------------------~~~~~~~~~~~y~~~~~~~~~p----~~~--p~~~~l~~~lPp~~ 252 (318)
T PRK10162 205 L-----LGGVWDGL---------------------TQQDLQMYEEAYLSNDADRESP----YYC--LFNNDLTRDVPPCF 252 (318)
T ss_pred H-----hCCCcccc---------------------CHHHHHHHHHHhCCCccccCCc----ccC--cchhhhhcCCCCeE
Confidence 0 00000000 0111111111111000000000 000 00011212235899
Q ss_pred EEecCCCCCCchHHHHHHhhccCC--cEEEEecCCCCCccc-----cChhhhHHHHHHHHhhc
Q 018947 247 IFVGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 247 ~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 302 (348)
+++|+.|++.+....+++++...+ ++++++++..|.... +...+..+.+.+||++.
T Consensus 253 i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 253 IAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred EEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 999999999988888888877644 789999999995432 22345666777788654
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.5e-13 Score=112.05 Aligned_cols=123 Identities=15% Similarity=0.149 Sum_probs=97.5
Q ss_pred eeecCCceeEEEEccCC------CCCeEEEeCCCCCChhhhccccccchhhhhhccC----------CeEEEEeCCCCCC
Q 018947 24 LIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH----------NFCIYHINPPGHE 87 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~------~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~----------g~~vi~~D~~G~G 87 (348)
..++.|-++|+...-++ .-.+|+++||++++-...++.. .++.+ -|.||++.+||+|
T Consensus 128 kTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfI-------PlLT~p~~hg~~~d~~FEVI~PSlPGyg 200 (469)
T KOG2565|consen 128 KTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFI-------PLLTDPKRHGNESDYAFEVIAPSLPGYG 200 (469)
T ss_pred hhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhh-------hhhcCccccCCccceeEEEeccCCCCcc
Confidence 35567888888755332 1237999999999988766544 33322 2789999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 88 FGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 88 ~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
.|+.+.. ...+..+.|.-+..+|=++|..++.+-|..||..|+..+|..+|++|.++-+-.+....
T Consensus 201 wSd~~sk---~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s 266 (469)
T KOG2565|consen 201 WSDAPSK---TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNS 266 (469)
T ss_pred cCcCCcc---CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCC
Confidence 9997643 44778888999999999999999999999999999999999999999998876655543
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-12 Score=117.14 Aligned_cols=110 Identities=13% Similarity=0.098 Sum_probs=85.1
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc---
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF--- 116 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l--- 116 (348)
..+++||+++.+....+.++..- -.+.+..++++||.|+++|+++-+... ...+++++++.+.+.++.+
T Consensus 213 v~~~PLLIVPp~INK~YIlDL~P-~~SlVr~lv~qG~~VflIsW~nP~~~~-------r~~~ldDYv~~i~~Ald~V~~~ 284 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDLSP-EKSFVQYCLKNQLQVFIISWRNPDKAH-------REWGLSTYVDALKEAVDAVRAI 284 (560)
T ss_pred cCCCcEEEechhhhhhheeecCC-cchHHHHHHHcCCeEEEEeCCCCChhh-------cCCCHHHHHHHHHHHHHHHHHh
Confidence 35678999999875544433211 245667888999999999999976543 4578999998777777554
Q ss_pred -CCCceeEEEeChhHHHHHH----HHHhCCC-CcceEEEecCCCCCC
Q 018947 117 -GLGAVMCMGVTAGAYILTL----FAMKYRH-RVLGLILVSPLCKAP 157 (348)
Q Consensus 117 -~~~~v~lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~~~~ 157 (348)
|.++++++|+|+||.++.. +++++++ +|++++++.+.....
T Consensus 285 tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 285 TGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred cCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 6789999999999999997 7888886 799999998877653
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.1e-13 Score=107.78 Aligned_cols=113 Identities=11% Similarity=0.085 Sum_probs=74.3
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC---C---CCCCCCHHHHHHHHHHHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS---D---DEPVLSVDDLADQIAEVL 113 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~---~---~~~~~~~~~~~~dl~~~l 113 (348)
...|+||++||.+.+...+.....| .......||.|+++|++|+|.+..... . ........++.+.+..+.
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~---~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGW---KAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVK 87 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcCh---HHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHH
Confidence 3678999999999887665321111 122234699999999999875432100 0 001112233333333344
Q ss_pred HHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 114 NHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 114 ~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+..++ ++++|+|||+||.+++.++.++|+++.+++.+++...
T Consensus 88 ~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 88 ANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 44433 5899999999999999999999999999988886654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.1e-14 Score=119.35 Aligned_cols=116 Identities=13% Similarity=0.138 Sum_probs=80.5
Q ss_pred eeEEEEccCCCCCeEEEeCCCCCCh-hhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018947 31 SLSVTIYGDQDKPALVTYPDLALNY-MSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (348)
Q Consensus 31 ~l~~~~~g~~~~p~vvllHG~~~~~-~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d 108 (348)
.+.+..+. +.+|++|++||++++. ..|...+ ...++. .+|+|+++|+++++.+..+ ....++..++++
T Consensus 26 ~~~~~~f~-~~~p~vilIHG~~~~~~~~~~~~l-----~~~ll~~~~~nVi~vD~~~~~~~~y~----~a~~~~~~v~~~ 95 (275)
T cd00707 26 SLKNSNFN-PSRPTRFIIHGWTSSGEESWISDL-----RKAYLSRGDYNVIVVDWGRGANPNYP----QAVNNTRVVGAE 95 (275)
T ss_pred hhhhcCCC-CCCCcEEEEcCCCCCCCCcHHHHH-----HHHHHhcCCCEEEEEECccccccChH----HHHHhHHHHHHH
Confidence 34443333 5688999999999886 3332211 123443 5899999999998432211 112345555556
Q ss_pred HHHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 109 IAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 109 l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
+..+++.+ +.++++++||||||.+|..++.++|++|.++++++|....
T Consensus 96 la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 96 LAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 66555543 4478999999999999999999999999999999987653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.3e-13 Score=111.74 Aligned_cols=238 Identities=13% Similarity=0.128 Sum_probs=89.4
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc--
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-- 116 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-- 116 (348)
....+|||+.|++..-... . +-+.+...+ ..+|.|+-+-++... ......+++.-++||.++++.+
T Consensus 31 ~~~~~llfIGGLtDGl~tv---p-Y~~~La~aL~~~~wsl~q~~LsSSy-------~G~G~~SL~~D~~eI~~~v~ylr~ 99 (303)
T PF08538_consen 31 SAPNALLFIGGLTDGLLTV---P-YLPDLAEALEETGWSLFQVQLSSSY-------SGWGTSSLDRDVEEIAQLVEYLRS 99 (303)
T ss_dssp TSSSEEEEE--TT--TT-S---T-CHHHHHHHHT-TT-EEEEE--GGGB-------TTS-S--HHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCCCCC---c-hHHHHHHHhccCCeEEEEEEecCcc-------CCcCcchhhhHHHHHHHHHHHHHH
Confidence 3566899999998764432 1 112334444 469999999876421 1133467888888888877543
Q ss_pred ------CCCceeEEEeChhHHHHHHHHHhCC-----CCcceEEEecCCCCCCChHHHHHH----HHHHHH----HHhhcc
Q 018947 117 ------GLGAVMCMGVTAGAYILTLFAMKYR-----HRVLGLILVSPLCKAPSWTEWLYN----KVMSNL----LYYYGM 177 (348)
Q Consensus 117 ------~~~~v~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~ 177 (348)
+.++|+|+|||.|+.-+++|+.... ..|+++||-+|............. ...... .....-
T Consensus 100 ~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~ 179 (303)
T PF08538_consen 100 EKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKG 179 (303)
T ss_dssp HS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-T
T ss_pred hhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCC
Confidence 3468999999999999999998653 569999999998876543221111 111111 111111
Q ss_pred chhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc
Q 018947 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS 257 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~ 257 (348)
.. +++..+....... .+-...++..... +.+--.++........+...+..+.+|+|++.+++|..+|
T Consensus 180 ~~-----~lp~~~~~~~~~~----~PiTA~Rf~SL~s---~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP 247 (303)
T PF08538_consen 180 DE-----ILPREFTPLVFYD----TPITAYRFLSLAS---PGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVP 247 (303)
T ss_dssp T------GG----GGTTT-S----S---HHHHHT-S----SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---
T ss_pred Cc-----eeeccccccccCC----CcccHHHHHhccC---CCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceec
Confidence 11 1111111110000 1112222222211 1122233333334456667788999999999999999884
Q ss_pred hHH---HHHHhhccC------CcEEEEecCCCCCccccCh----hhhHHHHHHHHh
Q 018947 258 EAV---HMTSKIDRR------YSALVEVQACGSMVTEEQP----HAMLIPMEYFLM 300 (348)
Q Consensus 258 ~~~---~~~~~~~~~------~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~ 300 (348)
... .+.+++... ...-.++||+.|.+--+.. +.+.+.+..||+
T Consensus 248 ~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 248 PWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 322 344443321 1234589999998775332 357788888874
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.4e-13 Score=115.22 Aligned_cols=234 Identities=11% Similarity=0.035 Sum_probs=119.6
Q ss_pred CCCccceeecCCceeEEEEcc---CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
...++..|...+.+|..+.+- ....|+||++.|+-+-...++..+ ...+...|+.++++|+||.|.|... +
T Consensus 163 ~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~-----~~~l~~rGiA~LtvDmPG~G~s~~~-~ 236 (411)
T PF06500_consen 163 YPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLF-----RDYLAPRGIAMLTVDMPGQGESPKW-P 236 (411)
T ss_dssp SEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHH-----HCCCHHCT-EEEEE--TTSGGGTTT--
T ss_pred CCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHH-----HHHHHhCCCEEEEEccCCCcccccC-C
Confidence 334566677777777655442 234477888877766554432111 1245678999999999999998532 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHc---CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
...+ .+.+-..+.+.+... +..+|.++|.|+||++|.++|..+++|++++|..+++...--...+..
T Consensus 237 -l~~D--~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~------- 306 (411)
T PF06500_consen 237 -LTQD--SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQ------- 306 (411)
T ss_dssp -S-S---CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHH-------
T ss_pred -CCcC--HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHH-------
Confidence 1122 233444555555443 346899999999999999999999999999999998765321111110
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHH--hhh--ccCCccEEE
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDIS--EGL--RKLQCRSLI 247 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l--~~i~~Pvl~ 247 (348)
..+.... ...+...++.... + .+.+...+.. ..+. ..+ .+..+|+|.
T Consensus 307 ---~~~P~my-~d~LA~rlG~~~~------~---~~~l~~el~~----------------~SLk~qGlL~~rr~~~plL~ 357 (411)
T PF06500_consen 307 ---QRVPDMY-LDVLASRLGMAAV------S---DESLRGELNK----------------FSLKTQGLLSGRRCPTPLLA 357 (411)
T ss_dssp ---TTS-HHH-HHHHHHHCT-SCE----------HHHHHHHGGG----------------GSTTTTTTTTSS-BSS-EEE
T ss_pred ---hcCCHHH-HHHHHHHhCCccC------C---HHHHHHHHHh----------------cCcchhccccCCCCCcceEE
Confidence 1111111 1112222222110 0 1111111111 1111 123 577899999
Q ss_pred EecCCCCCCchHHH-HHHhhccCCcEEEEecCCC-CCccccChhhhHHHHHHHHhh
Q 018947 248 FVGESSPFHSEAVH-MTSKIDRRYSALVEVQACG-SMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 248 i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~g-H~~~~e~p~~~~~~i~~fl~~ 301 (348)
+.+++|+++|.... +...... +.+...++... |.. -+.-...+.+||+.
T Consensus 358 i~~~~D~v~P~eD~~lia~~s~-~gk~~~~~~~~~~~g----y~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 358 INGEDDPVSPIEDSRLIAESST-DGKALRIPSKPLHMG----YPQALDEIYKWLED 408 (411)
T ss_dssp EEETT-SSS-HHHHHHHHHTBT-T-EEEEE-SSSHHHH----HHHHHHHHHHHHHH
T ss_pred eecCCCCCCCHHHHHHHHhcCC-CCceeecCCCccccc----hHHHHHHHHHHHHH
Confidence 99999999865443 3333322 36777777544 322 23566677778765
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.4e-12 Score=110.27 Aligned_cols=214 Identities=15% Similarity=0.072 Sum_probs=111.6
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCC-CCCCC------CCC---------CCCCCHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF-GAAAI------SDD---------EPVLSVD 103 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~-S~~~~------~~~---------~~~~~~~ 103 (348)
..-|.||.+||.++....+.... .....||.|+.+|.||+|. +.... ... ...+-+.
T Consensus 81 ~~~Pavv~~hGyg~~~~~~~~~~-------~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr 153 (320)
T PF05448_consen 81 GKLPAVVQFHGYGGRSGDPFDLL-------PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYR 153 (320)
T ss_dssp SSEEEEEEE--TT--GGGHHHHH-------HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHH
T ss_pred CCcCEEEEecCCCCCCCCccccc-------ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHH
Confidence 34578999999998865543222 5667899999999999993 21110 000 1112233
Q ss_pred HHHHHHHHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 104 DLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 104 ~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
.+..|....++.+ +.+++.+.|.|.||.+++.+|+..+ +|++++...|...... ... .. ....
T Consensus 154 ~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~--~~~------~~--~~~~ 222 (320)
T PF05448_consen 154 RVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFR--RAL------EL--RADE 222 (320)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHH--HHH------HH--T--S
T ss_pred HHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchh--hhh------hc--CCcc
Confidence 3334444444332 3368999999999999999888775 6999998877554311 000 00 0000
Q ss_pred chhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc
Q 018947 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS 257 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~ 257 (348)
.. -.++...++.. . .........++.+ .+.|.....++|+||+++-.|-.|++++
T Consensus 223 ~~----------------------y~~~~~~~~~~-d-~~~~~~~~v~~~L-~Y~D~~nfA~ri~~pvl~~~gl~D~~cP 277 (320)
T PF05448_consen 223 GP----------------------YPEIRRYFRWR-D-PHHEREPEVFETL-SYFDAVNFARRIKCPVLFSVGLQDPVCP 277 (320)
T ss_dssp TT----------------------THHHHHHHHHH-S-CTHCHHHHHHHHH-HTT-HHHHGGG--SEEEEEEETT-SSS-
T ss_pred cc----------------------HHHHHHHHhcc-C-CCcccHHHHHHHH-hhhhHHHHHHHcCCCEEEEEecCCCCCC
Confidence 00 01111111100 0 0000111111111 3367788889999999999999999994
Q ss_pred hHH--HHHHhhccCCcEEEEecCCCCCccccChhhh-HHHHHHHHhh
Q 018947 258 EAV--HMTSKIDRRYSALVEVQACGSMVTEEQPHAM-LIPMEYFLMG 301 (348)
Q Consensus 258 ~~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~-~~~i~~fl~~ 301 (348)
..- .....++. ..++++++..|| |.+.++ .+...+||++
T Consensus 278 P~t~fA~yN~i~~-~K~l~vyp~~~H----e~~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 278 PSTQFAAYNAIPG-PKELVVYPEYGH----EYGPEFQEDKQLNFLKE 319 (320)
T ss_dssp HHHHHHHHCC--S-SEEEEEETT--S----STTHHHHHHHHHHHHHH
T ss_pred chhHHHHHhccCC-CeeEEeccCcCC----CchhhHHHHHHHHHHhc
Confidence 333 45566664 379999999999 444455 6777788765
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.8e-12 Score=104.76 Aligned_cols=100 Identities=22% Similarity=0.272 Sum_probs=78.4
Q ss_pred CeEEEeCCCCCChhhhccccccchhhhhhccCC-eEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC-c
Q 018947 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG-A 120 (348)
Q Consensus 43 p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~ 120 (348)
++|+|+|+.+++... |..+ ...+... +.|+.++.+|.+... ....+++++++...+.|.....+ +
T Consensus 1 ~~lf~~p~~gG~~~~-y~~l------a~~l~~~~~~v~~i~~~~~~~~~------~~~~si~~la~~y~~~I~~~~~~gp 67 (229)
T PF00975_consen 1 RPLFCFPPAGGSASS-YRPL------ARALPDDVIGVYGIEYPGRGDDE------PPPDSIEELASRYAEAIRARQPEGP 67 (229)
T ss_dssp -EEEEESSTTCSGGG-GHHH------HHHHTTTEEEEEEECSTTSCTTS------HEESSHHHHHHHHHHHHHHHTSSSS
T ss_pred CeEEEEcCCccCHHH-HHHH------HHhCCCCeEEEEEEecCCCCCCC------CCCCCHHHHHHHHHHHhhhhCCCCC
Confidence 479999999997654 3223 5667775 999999999997332 24579999999988888776655 9
Q ss_pred eeEEEeChhHHHHHHHHHhC---CCCcceEEEecCCCC
Q 018947 121 VMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCK 155 (348)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 155 (348)
+.|+|||+||.+|.++|.+- ...|..++++++...
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred eeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 99999999999999999853 456999999996654
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.5e-12 Score=103.14 Aligned_cols=181 Identities=17% Similarity=0.195 Sum_probs=101.5
Q ss_pred CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC------CCC---CCCCCC---CCC--CCCCHHH
Q 018947 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG------HEF---GAAAIS---DDE--PVLSVDD 104 (348)
Q Consensus 39 ~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G------~G~---S~~~~~---~~~--~~~~~~~ 104 (348)
.+..++|||+||+|.+...+.... . ......+..++.++-|- .|. +-.+.. ... ....+.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~----~-~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~ 85 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLA----E-LNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEE 85 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHH----H-HHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHH----h-hcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHH
Confidence 357789999999999985543211 0 02234577777776542 222 111100 000 1123344
Q ss_pred HHHHHHHHHHH-----cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccch
Q 018947 105 LADQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (348)
Q Consensus 105 ~~~dl~~~l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (348)
.++.+.++++. +..+++++.|.|.||++++.++.++|+.+.++|.+++........
T Consensus 86 s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~------------------- 146 (216)
T PF02230_consen 86 SAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL------------------- 146 (216)
T ss_dssp HHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC-------------------
T ss_pred HHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc-------------------
Confidence 44455555543 234689999999999999999999999999999988744321100
Q ss_pred hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--
Q 018947 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS-- 257 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~-- 257 (348)
.+..... -++|+++++|++|++++
T Consensus 147 ----------------------------------------------------~~~~~~~--~~~pi~~~hG~~D~vvp~~ 172 (216)
T PF02230_consen 147 ----------------------------------------------------EDRPEAL--AKTPILIIHGDEDPVVPFE 172 (216)
T ss_dssp ----------------------------------------------------HCCHCCC--CTS-EEEEEETT-SSSTHH
T ss_pred ----------------------------------------------------ccccccc--CCCcEEEEecCCCCcccHH
Confidence 0000001 16799999999999984
Q ss_pred hHHHHHHhhccCC--cEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 258 EAVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 258 ~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
..+...+.+.... .+++.++++||.+. .+..+.+.+||++
T Consensus 173 ~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 173 WAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp HHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 4455556555532 78999999999665 4556667888875
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-12 Score=101.20 Aligned_cols=253 Identities=11% Similarity=0.041 Sum_probs=137.2
Q ss_pred cCCceeEEEEccC-CCCC-eEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHH
Q 018947 27 TSHGSLSVTIYGD-QDKP-ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDD 104 (348)
Q Consensus 27 ~~~~~l~~~~~g~-~~~p-~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 104 (348)
.+|..+..+.+.. ++.+ .|++-.+.+... .|++..+....+.||.|+++|+||.|.|+... .....+.+.|
T Consensus 13 ~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~------~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~-~~~~~~~~~D 85 (281)
T COG4757 13 PDGYSLPGQRFPADGKASGRLVVAGATGVGQ------YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPAS-LSGSQWRYLD 85 (281)
T ss_pred CCCccCccccccCCCCCCCcEEecccCCcch------hHhHHHHHHhhccCceEEEEecccccCCCccc-cccCccchhh
Confidence 4666666555542 2223 344443333332 23445556677789999999999999998652 2334456666
Q ss_pred HHH-HHHHHH----HHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc-c
Q 018947 105 LAD-QIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM-C 178 (348)
Q Consensus 105 ~~~-dl~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 178 (348)
++. |+.+.+ +.+...+...||||+||.+.. ++.+++ +..+....+.......+...........++...+. .
T Consensus 86 wA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~l 163 (281)
T COG4757 86 WARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPL 163 (281)
T ss_pred hhhcchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCc-ccceeeEeccccccccchhhhhcccceeeccccccch
Confidence 653 454444 444556889999999999766 445555 56666666655554333332211111111000000 0
Q ss_pred hhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc-
Q 018947 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS- 257 (348)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~- 257 (348)
......+-..+++... +. .......+++......- +.. -. ......+....+.+|++.+...+|+.++
T Consensus 164 t~w~g~~p~~l~G~G~-d~----p~~v~RdW~RwcR~p~y--~fd-dp---~~~~~~q~yaaVrtPi~~~~~~DD~w~P~ 232 (281)
T COG4757 164 TFWKGYMPKDLLGLGS-DL----PGTVMRDWARWCRHPRY--YFD-DP---AMRNYRQVYAAVRTPITFSRALDDPWAPP 232 (281)
T ss_pred hhccccCcHhhcCCCc-cC----cchHHHHHHHHhcCccc--ccc-Ch---hHhHHHHHHHHhcCceeeeccCCCCcCCH
Confidence 0000111111222111 00 22233333222221100 000 00 0012445567889999999999999994
Q ss_pred -hHHHHHHhhccCCcEEEEecC----CCCCccccCh-hhhHHHHHHHH
Q 018947 258 -EAVHMTSKIDRRYSALVEVQA----CGSMVTEEQP-HAMLIPMEYFL 299 (348)
Q Consensus 258 -~~~~~~~~~~~~~~~~~~~~~----~gH~~~~e~p-~~~~~~i~~fl 299 (348)
..+.+.+..++...+...++. -||+....+| |.+.+.+.+|+
T Consensus 233 As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 233 ASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 444688888886666666654 4999998877 77878777775
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-11 Score=107.60 Aligned_cols=142 Identities=13% Similarity=0.134 Sum_probs=100.7
Q ss_pred CCCCCccceeecCCc-eeEE--EEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC
Q 018947 16 PPPSGKDNLIKTSHG-SLSV--TIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (348)
Q Consensus 16 ~~~~~~~~~v~~~~~-~l~~--~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 92 (348)
.-++.+++.|.|.+| -+.. ...+...+|+|+|.||+..++..|....-.....--+..+||.|+.-+.||.-.|...
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 346678899999666 2222 2334467899999999999999985443222333345578999999999997766542
Q ss_pred C------CCCCCCCCHHHHHH-HH----HHHHHHcCCCceeEEEeChhHHHHHHHHHhCCC---CcceEEEecCCCCCC
Q 018947 93 I------SDDEPVLSVDDLAD-QI----AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAP 157 (348)
Q Consensus 93 ~------~~~~~~~~~~~~~~-dl----~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~ 157 (348)
. ....-.+++.+++. || ..+++.-+.++++.+|||.|+.....++...|+ +|+.+++++|.....
T Consensus 124 ~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 124 KKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred cccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 1 11133456666543 44 444555577899999999999999988887765 799999999988544
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.2e-11 Score=95.65 Aligned_cols=182 Identities=12% Similarity=0.150 Sum_probs=107.3
Q ss_pred EEEeCCCCCChhhhccccccchhhhhhcc---CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCce
Q 018947 45 LVTYPDLALNYMSCFQGLFFCPEACSLLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (348)
Q Consensus 45 vvllHG~~~~~~~~~~~~~~~~~~~~~~~---~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v 121 (348)
|+++||+.++..+..... +...+. ....++++|++- ..++..+.+.++++....+.+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~-----l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~ 61 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQA-----LKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENV 61 (187)
T ss_pred eEEecCCCCCCCCHHHHH-----HHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCe
Confidence 799999999886642211 122222 235666666653 456777888888888887779
Q ss_pred eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCC
Q 018947 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201 (348)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (348)
.|+|.||||..|..+|.+++ +++ |+++|........ ..+.+.........
T Consensus 62 ~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l--------------------------~~~iG~~~~~~~~e- 111 (187)
T PF05728_consen 62 VLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELL--------------------------QDYIGEQTNPYTGE- 111 (187)
T ss_pred EEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHH--------------------------HHhhCccccCCCCc-
Confidence 99999999999999999885 444 8899988752211 11111111000000
Q ss_pred ChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCC
Q 018947 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGS 281 (348)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 281 (348)
.-.+....... .+.+ +. ....-..+++++.++.|.+.+.. ...+.+.+ ...++.+|++|
T Consensus 112 ~~~~~~~~~~~------------l~~l----~~--~~~~~~~~~lvll~~~DEvLd~~-~a~~~~~~--~~~~i~~ggdH 170 (187)
T PF05728_consen 112 SYELTEEHIEE------------LKAL----EV--PYPTNPERYLVLLQTGDEVLDYR-EAVAKYRG--CAQIIEEGGDH 170 (187)
T ss_pred cceechHhhhh------------cceE----ec--cccCCCccEEEEEecCCcccCHH-HHHHHhcC--ceEEEEeCCCC
Confidence 00000000000 0000 00 00223468999999999998663 44455555 56667788899
Q ss_pred CccccChhhhHHHHHHHH
Q 018947 282 MVTEEQPHAMLIPMEYFL 299 (348)
Q Consensus 282 ~~~~e~p~~~~~~i~~fl 299 (348)
-.. +-++....|.+|+
T Consensus 171 ~f~--~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 171 SFQ--DFEEYLPQIIAFL 186 (187)
T ss_pred CCc--cHHHHHHHHHHhh
Confidence 554 4556667777776
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.1e-11 Score=90.57 Aligned_cols=178 Identities=15% Similarity=0.137 Sum_probs=110.6
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL- 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~- 118 (348)
+..|+.|++|--+..+....+... ......+.+.||.++.+|+||.|.|...... ..-..+|....+ ++++....
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv-~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--GiGE~~Da~aal-dW~~~~hp~ 101 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVV-QTLARALVKRGFATLRFNFRGVGRSQGEFDN--GIGELEDAAAAL-DWLQARHPD 101 (210)
T ss_pred CCCceEEecCCCccccCccCCHHH-HHHHHHHHhCCceEEeecccccccccCcccC--CcchHHHHHHHH-HHHHhhCCC
Confidence 566788888865544433322221 1223456678999999999999999765332 112233333333 33333332
Q ss_pred Cc-eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCC
Q 018947 119 GA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197 (348)
Q Consensus 119 ~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
.+ ..+.|+|+|++|++.+|.+.|+ ....+.+.+.... +
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~--~-------------------------------------- 140 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA--Y-------------------------------------- 140 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc--h--------------------------------------
Confidence 23 4689999999999999998876 3333332222210 0
Q ss_pred CCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEec
Q 018947 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQ 277 (348)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 277 (348)
-...+....+|.++|+|+.|.+++....+...-+ ...++++++
T Consensus 141 ------------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~ 183 (210)
T COG2945 141 ------------------------------------DFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIP 183 (210)
T ss_pred ------------------------------------hhhhccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEec
Confidence 0001234567899999999988754443333222 237899999
Q ss_pred CCCCCccccChhhhHHHHHHHHh
Q 018947 278 ACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 278 ~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
++.||.+ .+-+.+.+.|.+||.
T Consensus 184 ~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 184 GADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred CCCceec-ccHHHHHHHHHHHhh
Confidence 9999888 556778999999985
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.8e-11 Score=94.68 Aligned_cols=224 Identities=11% Similarity=0.058 Sum_probs=131.3
Q ss_pred CCceeEEEEc----cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC--CCCCC----
Q 018947 28 SHGSLSVTIY----GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA--ISDDE---- 97 (348)
Q Consensus 28 ~~~~l~~~~~----g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~--~~~~~---- 97 (348)
+|.+|.-+.. ++...|.||-.||.+++...|...+ .....||.|+.+|.||.|.|... .++..
T Consensus 65 ~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l-------~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~p 137 (321)
T COG3458 65 GGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML-------HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDP 137 (321)
T ss_pred CCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc-------cccccceeEEEEecccCCCccccCCCCCCCCcCC
Confidence 5667654432 3346689999999999987654444 44568999999999999977431 01110
Q ss_pred -----------CCC----CHHHHHHHHHHHH--HHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH
Q 018947 98 -----------PVL----SVDDLADQIAEVL--NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (348)
Q Consensus 98 -----------~~~----~~~~~~~dl~~~l--~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (348)
..| -+.|.+..+..++ ...+-+++.+.|.|.||.+++..++.. .+|++++.+-|.......
T Consensus 138 G~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~-~rik~~~~~~Pfl~df~r- 215 (321)
T COG3458 138 GFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD-PRIKAVVADYPFLSDFPR- 215 (321)
T ss_pred ceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC-hhhhcccccccccccchh-
Confidence 111 1233333333333 334457899999999999999777665 479998887776553211
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhcc
Q 018947 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240 (348)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 240 (348)
+. .+... .+ -.-+.++|... .+. -...++.+ ++.|......+
T Consensus 216 -~i------~~~~~---~~---ydei~~y~k~h-----------------------~~~-e~~v~~TL-~yfD~~n~A~R 257 (321)
T COG3458 216 -AI------ELATE---GP---YDEIQTYFKRH-----------------------DPK-EAEVFETL-SYFDIVNLAAR 257 (321)
T ss_pred -he------eeccc---Cc---HHHHHHHHHhc-----------------------Cch-HHHHHHHH-hhhhhhhHHHh
Confidence 00 00000 00 00111111111 000 00011111 22466677789
Q ss_pred CCccEEEEecCCCCCCchHH--HHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 241 LQCRSLIFVGESSPFHSEAV--HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 241 i~~Pvl~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+++|+|+..|-.|++++... ...+.+.. ..++.+++.-+|.-. |.-..+.+..|++.+
T Consensus 258 iK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l 317 (321)
T COG3458 258 IKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEGG---PGFQSRQQVHFLKIL 317 (321)
T ss_pred hccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccccccC---cchhHHHHHHHHHhh
Confidence 99999999999999994333 45566665 366777777667443 554556677787765
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.38 E-value=9.3e-12 Score=102.09 Aligned_cols=179 Identities=16% Similarity=0.166 Sum_probs=103.0
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC--------CHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL--------SVDDLADQIAEV 112 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~--------~~~~~~~dl~~~ 112 (348)
..|.||++|+..+-... .+ ..+..+.+.||.|+++|+-+-...... ....... ..+...+++.+.
T Consensus 13 ~~~~Vvv~~d~~G~~~~-~~-----~~ad~lA~~Gy~v~~pD~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa 85 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPN-IR-----DLADRLAEEGYVVLAPDLFGGRGAPPS-DPEEAFAAMRELFAPRPEQVAADLQAA 85 (218)
T ss_dssp SEEEEEEE-BTTBS-HH-HH-----HHHHHHHHTT-EEEEE-CCCCTS--CC-CHHCHHHHHHHCHHHSHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCchH-HH-----HHHHHHHhcCCCEEecccccCCCCCcc-chhhHHHHHHHHHhhhHHHHHHHHHHH
Confidence 46899999998765422 11 233567788999999998653320110 0000000 134455666555
Q ss_pred HHHcC------CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHH
Q 018947 113 LNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186 (348)
Q Consensus 113 l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (348)
++.+. .+++.++|+||||.+++.+|.+. ..+++.|..-+....
T Consensus 86 ~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------ 134 (218)
T PF01738_consen 86 VDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------ 134 (218)
T ss_dssp HHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG------------------------------
T ss_pred HHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC------------------------------
Confidence 55442 35899999999999999988877 678888876550000
Q ss_pred HhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHH
Q 018947 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTS 264 (348)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~ 264 (348)
........++++|+++++|++|+.++ ....+.+
T Consensus 135 ---------------------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~ 169 (218)
T PF01738_consen 135 ---------------------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEE 169 (218)
T ss_dssp ---------------------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHH
T ss_pred ---------------------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHH
Confidence 01112234678999999999999983 2345666
Q ss_pred hhcc--CCcEEEEecCCCCCccccCh--------hhhHHHHHHHHhhc
Q 018947 265 KIDR--RYSALVEVQACGSMVTEEQP--------HAMLIPMEYFLMGY 302 (348)
Q Consensus 265 ~~~~--~~~~~~~~~~~gH~~~~e~p--------~~~~~~i~~fl~~~ 302 (348)
.+.. ...+++++++++|-...... ++-.+.+.+||++.
T Consensus 170 ~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 170 ALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred HHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 6622 24899999999997665322 23445666777653
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.4e-11 Score=94.48 Aligned_cols=154 Identities=11% Similarity=0.180 Sum_probs=99.3
Q ss_pred EEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEE
Q 018947 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124 (348)
Q Consensus 45 vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 124 (348)
|+++||++++....+. +.....+...++|-.+|+ + ..+.+++.+.+.+.+.... +++++|
T Consensus 1 v~IvhG~~~s~~~HW~-----~wl~~~l~~~~~V~~~~~------~--------~P~~~~W~~~l~~~i~~~~-~~~ilV 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQ-----PWLERQLENSVRVEQPDW------D--------NPDLDEWVQALDQAIDAID-EPTILV 60 (171)
T ss_dssp EEEE--TTSSTTTSTH-----HHHHHHHTTSEEEEEC--------T--------S--HHHHHHHHHHCCHC-T-TTEEEE
T ss_pred CEEeCCCCCCCccHHH-----HHHHHhCCCCeEEecccc------C--------CCCHHHHHHHHHHHHhhcC-CCeEEE
Confidence 6899999998765433 333555555588887777 1 1367888888888777654 569999
Q ss_pred EeChhHHHHHHHH-HhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCCh
Q 018947 125 GVTAGAYILTLFA-MKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203 (348)
Q Consensus 125 GhS~Gg~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (348)
|||+|+..+++++ .....+|.+++|++++..... ....... ..|.
T Consensus 61 aHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~----------------~~~~~~~------~~f~------------ 106 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDP----------------EPFPPEL------DGFT------------ 106 (171)
T ss_dssp EETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCH----------------HCCTCGG------CCCT------------
T ss_pred EeCHHHHHHHHHHhhcccccccEEEEEcCCCcccc----------------cchhhhc------cccc------------
Confidence 9999999999999 777889999999998754200 0000000 0000
Q ss_pred HHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCC
Q 018947 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGS 281 (348)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH 281 (348)
.. ....+.+|.++|.+++|+++ ..+..+++.+. ++++.++++||
T Consensus 107 -----------------------------~~--p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~---a~~~~~~~~GH 152 (171)
T PF06821_consen 107 -----------------------------PL--PRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG---AELIILGGGGH 152 (171)
T ss_dssp -----------------------------TS--HCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT----EEEEETS-TT
T ss_pred -----------------------------cC--cccccCCCeEEEEcCCCCccCHHHHHHHHHHcC---CCeEECCCCCC
Confidence 00 01123456799999999999 45667889887 89999999999
Q ss_pred Ccccc
Q 018947 282 MVTEE 286 (348)
Q Consensus 282 ~~~~e 286 (348)
+...+
T Consensus 153 f~~~~ 157 (171)
T PF06821_consen 153 FNAAS 157 (171)
T ss_dssp SSGGG
T ss_pred ccccc
Confidence 87754
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.1e-12 Score=118.27 Aligned_cols=127 Identities=13% Similarity=0.028 Sum_probs=86.8
Q ss_pred ceeecCCceeEEEEccCC---------CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYGDQ---------DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~---------~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
+++..++.++.|...|.. ..|+|||+||++++...|.. ....+..+||+|+++|+||||.|....
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~------lA~~La~~Gy~VIaiDlpGHG~S~~~~ 494 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALA------FAGTLAAAGVATIAIDHPLHGARSFDA 494 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHH------HHHHHHhCCcEEEEeCCCCCCcccccc
Confidence 334445666666554321 23589999999999876542 224555689999999999999984320
Q ss_pred C--------CCCC-----------CCCHHHHHHHHHHHHHHcC----------------CCceeEEEeChhHHHHHHHHH
Q 018947 94 S--------DDEP-----------VLSVDDLADQIAEVLNHFG----------------LGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 94 ~--------~~~~-----------~~~~~~~~~dl~~~l~~l~----------------~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
. .... ..++++.+.|+..+...++ ..+++++||||||.++..++.
T Consensus 495 ~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 495 NASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred ccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 0 0001 1378999999998887776 358999999999999999997
Q ss_pred hCCC-----------CcceEEEecCCCC
Q 018947 139 KYRH-----------RVLGLILVSPLCK 155 (348)
Q Consensus 139 ~~p~-----------~v~~lvl~~~~~~ 155 (348)
.... .+.+..+..|...
T Consensus 575 ~an~~~~~~~~~~l~~~~~a~l~~pgGg 602 (792)
T TIGR03502 575 YANTPLGSPTADALYAVNAASLQNPGGG 602 (792)
T ss_pred hcCccccCCccccccccceeeeecCCcc
Confidence 5332 2345555555544
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.4e-11 Score=98.08 Aligned_cols=177 Identities=18% Similarity=0.178 Sum_probs=110.9
Q ss_pred cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC--CCCCCCCCCCCCCCCCHHH-------HHHH
Q 018947 38 GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAAISDDEPVLSVDD-------LADQ 108 (348)
Q Consensus 38 g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~S~~~~~~~~~~~~~~~-------~~~d 108 (348)
+++..|+||++||+|++..+... + ......++.++.+.-+- .|.-.-..-.+...++.++ +++.
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~-~------~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~ 86 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVP-L------PELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEF 86 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhh-h------hhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHH
Confidence 44677899999999988876533 1 34455566666543211 0100000000112233333 3444
Q ss_pred HHHHHHHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHH
Q 018947 109 IAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLL 186 (348)
Q Consensus 109 l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (348)
+..+.++.++ ++++++|+|-||++++.+..++|+.++++++..+........
T Consensus 87 l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~-------------------------- 140 (207)
T COG0400 87 LEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL-------------------------- 140 (207)
T ss_pred HHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc--------------------------
Confidence 4455566666 789999999999999999999999999999887755532110
Q ss_pred HhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHH
Q 018947 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 264 (348)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~ 264 (348)
. -..-..|+++++|+.|+++ ....++.+
T Consensus 141 ------~--------------------------------------------~~~~~~pill~hG~~Dpvvp~~~~~~l~~ 170 (207)
T COG0400 141 ------L--------------------------------------------PDLAGTPILLSHGTEDPVVPLALAEALAE 170 (207)
T ss_pred ------c--------------------------------------------cccCCCeEEEeccCcCCccCHHHHHHHHH
Confidence 0 0012479999999999998 34455666
Q ss_pred hhccCC--cEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 265 KIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 265 ~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.+.+ ++...++ +||.+.. +-.+.+.+|+.+.
T Consensus 171 ~l~~~g~~v~~~~~~-~GH~i~~----e~~~~~~~wl~~~ 205 (207)
T COG0400 171 YLTASGADVEVRWHE-GGHEIPP----EELEAARSWLANT 205 (207)
T ss_pred HHHHcCCCEEEEEec-CCCcCCH----HHHHHHHHHHHhc
Confidence 555533 6777777 9996654 4455566677654
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.6e-11 Score=114.79 Aligned_cols=133 Identities=17% Similarity=0.097 Sum_probs=91.2
Q ss_pred Cccceeec-CCceeEE-EEc-----cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC
Q 018947 20 GKDNLIKT-SHGSLSV-TIY-----GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (348)
Q Consensus 20 ~~~~~v~~-~~~~l~~-~~~-----g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 92 (348)
.++.++.+ +|.+|.+ ..+ .+...|+||++||..+..... . |......++++||.|+.++.||-|.=...
T Consensus 416 ~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p---~-f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 416 SEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA---D-FSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred EEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC---C-ccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 34445554 5667765 333 223569999999976665332 1 22333577889999999999996543221
Q ss_pred CC----CCCCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 93 IS----DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 93 ~~----~~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
.. ......+++|+++-+..+++. ...+++.+.|.|+||+++...+.++|++++++|...+....
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 10 112235777887777776654 12468999999999999999999999999999998776663
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-10 Score=95.74 Aligned_cols=198 Identities=12% Similarity=0.111 Sum_probs=127.3
Q ss_pred cceeecCCceeEEEEc---cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC-CCCCCCCCCC-
Q 018947 22 DNLIKTSHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAISDD- 96 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~---g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~~~~~- 96 (348)
...+.+.+..+.-+.. +....|.||++|+..+-..... .....+...||.|+++|+-+. |.+.......
T Consensus 4 ~v~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~------~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~ 77 (236)
T COG0412 4 DVTIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNPHIR------DVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPA 77 (236)
T ss_pred ceEeeCCCceEeEEEecCCcCCCCCEEEEEecccCCchHHH------HHHHHHHhCCcEEEechhhccCCCCCcccccHH
Confidence 3445555665543332 3233489999999876554221 334677789999999998773 3222110000
Q ss_pred -CC-----CCCHHHHHHHHHHHHHHcC------CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHH
Q 018947 97 -EP-----VLSVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (348)
Q Consensus 97 -~~-----~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (348)
.. ..+..+...|+.+.++.+. .++|.++|.||||.+++.++.+.| +|++.+..-+......
T Consensus 78 ~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~------ 150 (236)
T COG0412 78 ELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD------ 150 (236)
T ss_pred HHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc------
Confidence 00 1223677778877776653 467999999999999999998887 7888776544332110
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCcc
Q 018947 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (348)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 244 (348)
.....++++|
T Consensus 151 ----------------------------------------------------------------------~~~~~~~~~p 160 (236)
T COG0412 151 ----------------------------------------------------------------------TADAPKIKVP 160 (236)
T ss_pred ----------------------------------------------------------------------ccccccccCc
Confidence 0002367899
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhccC--CcEEEEecCCCCCccccC-----------hhhhHHHHHHHHhhc
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDRR--YSALVEVQACGSMVTEEQ-----------PHAMLIPMEYFLMGY 302 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~-----------p~~~~~~i~~fl~~~ 302 (348)
+|++.|+.|..++ ....+.+.+... ..++.+++++.|-.+.+. .+.-.+.+.+||++.
T Consensus 161 vl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 161 VLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred EEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999983 344566655554 478899999989776432 134456677787765
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.9e-11 Score=98.72 Aligned_cols=195 Identities=14% Similarity=0.106 Sum_probs=105.4
Q ss_pred EEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----cCC
Q 018947 45 LVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH-----FGL 118 (348)
Q Consensus 45 vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-----l~~ 118 (348)
||++||.+......... +.....++. .|+.|+.+|+|=..+. .....++|..+.+..++++ .+.
T Consensus 1 v~~~HGGg~~~g~~~~~---~~~~~~la~~~g~~v~~~~Yrl~p~~-------~~p~~~~D~~~a~~~l~~~~~~~~~d~ 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH---WPFAARLAAERGFVVVSIDYRLAPEA-------PFPAALEDVKAAYRWLLKNADKLGIDP 70 (211)
T ss_dssp EEEE--STTTSCGTTTH---HHHHHHHHHHHTSEEEEEE---TTTS-------STTHHHHHHHHHHHHHHHTHHHHTEEE
T ss_pred CEEECCcccccCChHHH---HHHHHHHHhhccEEEEEeeccccccc-------cccccccccccceeeeccccccccccc
Confidence 78999987764332111 233345554 7999999999964221 1234455555555556655 455
Q ss_pred CceeEEEeChhHHHHHHHHHhCCC----CcceEEEecCCCCC-CCh-HHHHHHHHHHHHHHhhccchhHHHHHHHhhhcc
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKA-PSW-TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK 192 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (348)
++++++|+|.||.+++.++....+ .++++++++|.... ... .......... ....+.......+...+..
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 146 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENK---DDPFLPAPKIDWFWKLYLP- 146 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHS---TTSSSBHHHHHHHHHHHHS-
T ss_pred cceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccc---ccccccccccccccccccc-
Confidence 789999999999999999875433 38999999997644 111 1110000000 0000000000111111111
Q ss_pred cccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHh-hhccCCccEEEEecCCCCCCchHHHHHHhhccCC-
Q 018947 193 EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISE-GLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRY- 270 (348)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~- 270 (348)
.... ..+ .+ . .... .+.. -.|+++++|+.|.+++....+.+++...+
T Consensus 147 ~~~~-------------------~~~-----~~----s--p~~~~~~~~-~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv 195 (211)
T PF07859_consen 147 GSDR-------------------DDP-----LA----S--PLNASDLKG-LPPTLIIHGEDDVLVDDSLRFAEKLKKAGV 195 (211)
T ss_dssp TGGT-------------------TST-----TT----S--GGGSSCCTT-CHEEEEEEETTSTTHHHHHHHHHHHHHTT-
T ss_pred cccc-------------------ccc-----cc----c--ccccccccc-CCCeeeeccccccchHHHHHHHHHHHHCCC
Confidence 0000 000 00 0 0000 1222 34899999999998877777877777654
Q ss_pred -cEEEEecCCCCCcc
Q 018947 271 -SALVEVQACGSMVT 284 (348)
Q Consensus 271 -~~~~~~~~~gH~~~ 284 (348)
++++++++++|...
T Consensus 196 ~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 196 DVELHVYPGMPHGFF 210 (211)
T ss_dssp EEEEEEETTEETTGG
T ss_pred CEEEEEECCCeEEee
Confidence 78899999999654
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-10 Score=98.94 Aligned_cols=108 Identities=15% Similarity=0.110 Sum_probs=82.4
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA-----DQIAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~-----~dl~~~l~~ 115 (348)
.+++++++|-+......+.... ..+.+..++++|+.|+.+|+++-..+.. ..+++|+. +.+..+.+.
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~-~~s~V~~l~~~g~~vfvIsw~nPd~~~~-------~~~~edYi~e~l~~aid~v~~i 177 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSP-EKSLVRWLLEQGLDVFVISWRNPDASLA-------AKNLEDYILEGLSEAIDTVKDI 177 (445)
T ss_pred CCCceEeeccccCceeEEeCCC-CccHHHHHHHcCCceEEEeccCchHhhh-------hccHHHHHHHHHHHHHHHHHHH
Confidence 5678999998876655543322 4456677889999999999998755542 34566655 445556677
Q ss_pred cCCCceeEEEeChhHHHHHHHHHhCCCC-cceEEEecCCCCC
Q 018947 116 FGLGAVMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKA 156 (348)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~ 156 (348)
.+.+++.++|+|.||+++..+++.++.+ |++++++.+..+.
T Consensus 178 tg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 178 TGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred hCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 7889999999999999999999988888 9999998877654
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.25 E-value=2e-11 Score=81.57 Aligned_cols=77 Identities=14% Similarity=0.164 Sum_probs=59.0
Q ss_pred CceeEEEEccCCC--CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH
Q 018947 29 HGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (348)
Q Consensus 29 ~~~l~~~~~g~~~--~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (348)
|.+|++..+.+++ +.+|+++||++.+..-+. ..+..+.++||.|+++|+||||.|... .....++++++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~------~~a~~L~~~G~~V~~~D~rGhG~S~g~---rg~~~~~~~~v 71 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYA------HLAEFLAEQGYAVFAYDHRGHGRSEGK---RGHIDSFDDYV 71 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHH------HHHHHHHhCCCEEEEECCCcCCCCCCc---ccccCCHHHHH
Confidence 4577888776433 679999999988875432 234677788999999999999999743 23457899999
Q ss_pred HHHHHHHH
Q 018947 107 DQIAEVLN 114 (348)
Q Consensus 107 ~dl~~~l~ 114 (348)
+|+..+++
T Consensus 72 ~D~~~~~~ 79 (79)
T PF12146_consen 72 DDLHQFIQ 79 (79)
T ss_pred HHHHHHhC
Confidence 99998864
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.2e-10 Score=95.58 Aligned_cols=239 Identities=13% Similarity=0.086 Sum_probs=130.2
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH-------H---HH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA-------D---QI 109 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~-------~---dl 109 (348)
+.+|.+|.++|.|.++......+ .+.+++++|+..+.+..|-||.-.+.........+..|+. . .+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l----~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~L 165 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRL----MARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRAL 165 (348)
T ss_pred CCCceEEEecCCCccchhhhhhh----hhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHH
Confidence 46788999999988764322222 2467888899999999999986443211111223333332 1 23
Q ss_pred HHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHH-HHHhhccchhHHHHHHHh
Q 018947 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN-LLYYYGMCGVVKELLLKR 188 (348)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 188 (348)
..+++.-|..++.+.|.||||.+|...|+..|..|..+-.+++......+..-.......+ .+..........+. ...
T Consensus 166 l~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~-~~~ 244 (348)
T PF09752_consen 166 LHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEE-ISD 244 (348)
T ss_pred HHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhh-hcc
Confidence 3344555888999999999999999999999998877777766554433322211111100 00000000000000 000
Q ss_pred hhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCc-----cEEEEecCCCCCCc--hHHH
Q 018947 189 YFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-----RSLIFVGESSPFHS--EAVH 261 (348)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-----Pvl~i~g~~D~~~~--~~~~ 261 (348)
. ... .... .....-..........++... .+....+.+..+ .+.++.+++|..++ ....
T Consensus 245 ~-~~~---------~~~~-~~~~~~~~~~~~Ea~~~m~~~---md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~ 310 (348)
T PF09752_consen 245 I-PAQ---------NKSL-PLDSMEERRRDREALRFMRGV---MDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLS 310 (348)
T ss_pred c-ccC---------cccc-cchhhccccchHHHHHHHHHH---HHhhccccccCCCCCCCcEEEEEecCceEechhhcch
Confidence 0 000 0000 000000000000111111111 112222333333 37889999999883 4557
Q ss_pred HHHhhccCCcEEEEecCCCCCcc-ccChhhhHHHHHHHHh
Q 018947 262 MTSKIDRRYSALVEVQACGSMVT-EEQPHAMLIPMEYFLM 300 (348)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~ 300 (348)
+.+.+++ +++..++ +||..- +-+.+.|.+.|.+-++
T Consensus 311 Lq~~WPG--sEvR~l~-gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 311 LQEIWPG--SEVRYLP-GGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred HHHhCCC--CeEEEec-CCcEEEeeechHHHHHHHHHHhh
Confidence 8999998 8999997 599654 4678899999988665
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.5e-10 Score=110.45 Aligned_cols=215 Identities=11% Similarity=0.054 Sum_probs=115.3
Q ss_pred hhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--------------------CCceeEEEeCh
Q 018947 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG--------------------LGAVMCMGVTA 128 (348)
Q Consensus 69 ~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--------------------~~~v~lvGhS~ 128 (348)
..++.+||.|+.+|.||+|.|+.... ... .+-.+|..++++.+. ..+|.++|.||
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~----~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT----TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc----cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 46778899999999999999874321 122 333445555554443 36899999999
Q ss_pred hHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccc----hhHHHHHHHhhhcccccCCCCCCChH
Q 018947 129 GAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC----GVVKELLLKRYFSKEVRGNAQVPESD 204 (348)
Q Consensus 129 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (348)
||.+++.+|...|..++++|.+++.... .......-. .....++. .........+......... ...
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~---yd~yr~~G~--~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~----~~~ 418 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSW---YDYYRENGL--VRAPGGYQGEDLDVLAELTYSRNLLAGDYLR----HNE 418 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcH---HHHhhcCCc--eeccCCcCCcchhhHHHHhhhcccCcchhhc----chH
Confidence 9999999999999999999987766442 111000000 00000100 0000111111000000000 111
Q ss_pred HHHHHHHHHhh-h--chhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccC--CcEEEEec
Q 018947 205 IVQACRRLLDE-R--QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRR--YSALVEVQ 277 (348)
Q Consensus 205 ~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~ 277 (348)
..+.+...+.. . ....+..++. ..++...+.++++|+|+|+|..|..++ ...++.+.+... ..++.+.
T Consensus 419 ~~~~~~~~~~~~~~~~~~~y~~fW~----~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~- 493 (767)
T PRK05371 419 ACEKLLAELTAAQDRKTGDYNDFWD----DRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH- 493 (767)
T ss_pred HHHHHHhhhhhhhhhcCCCccHHHH----hCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-
Confidence 11111110000 0 0001112221 135556778999999999999999884 445666666431 2455444
Q ss_pred CCCCCccc-cChhhhHHHHHHHHhhc
Q 018947 278 ACGSMVTE-EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 278 ~~gH~~~~-e~p~~~~~~i~~fl~~~ 302 (348)
.++|.... ..+..+.+.+.+|+...
T Consensus 494 ~g~H~~~~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 494 QGGHVYPNNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred CCCccCCCchhHHHHHHHHHHHHHhc
Confidence 57885443 34556677777777554
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=118.37 Aligned_cols=101 Identities=19% Similarity=0.173 Sum_probs=82.6
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-C
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~ 119 (348)
++++++|+||++++...|.. + ...+..+++|+++|.+|+|.+. ...++++++++++.+.++.+.. .
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~-l------~~~l~~~~~v~~~~~~g~~~~~------~~~~~l~~la~~~~~~i~~~~~~~ 1133 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSV-L------SRYLDPQWSIYGIQSPRPDGPM------QTATSLDEVCEAHLATLLEQQPHG 1133 (1296)
T ss_pred CCCCeEEecCCCCchHHHHH-H------HHhcCCCCcEEEEECCCCCCCC------CCCCCHHHHHHHHHHHHHhhCCCC
Confidence 45789999999998765432 1 4566788999999999998642 2357999999999999987654 5
Q ss_pred ceeEEEeChhHHHHHHHHHh---CCCCcceEEEecCCC
Q 018947 120 AVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLC 154 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 154 (348)
+++++|||+||.++.++|.+ .++++..++++++..
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 89999999999999999985 578899999998754
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.6e-10 Score=81.44 Aligned_cols=184 Identities=12% Similarity=0.079 Sum_probs=122.5
Q ss_pred eEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCce
Q 018947 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF--GAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (348)
Q Consensus 44 ~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~--S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v 121 (348)
+||+-||.|.+..+.+.. .....+...|+.|..|+++..-. .....++.....-..++...+.++...+...+.
T Consensus 16 tilLaHGAGasmdSt~m~----~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpL 91 (213)
T COG3571 16 TILLAHGAGASMDSTSMT----AVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPL 91 (213)
T ss_pred EEEEecCCCCCCCCHHHH----HHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCce
Confidence 789999999886554321 23356667899999999876421 111112222333445677777788887777899
Q ss_pred eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCC
Q 018947 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201 (348)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (348)
++-|+||||.++...+......|+++++++-++..+...+.
T Consensus 92 i~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~--------------------------------------- 132 (213)
T COG3571 92 IIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ--------------------------------------- 132 (213)
T ss_pred eeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc---------------------------------------
Confidence 99999999999999998776679999988755544331100
Q ss_pred ChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCC
Q 018947 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGS 281 (348)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 281 (348)
-..+.+..+++|++|.+|+.|++-... +.+...-....++++++++.|
T Consensus 133 -------------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~-~Va~y~ls~~iev~wl~~adH 180 (213)
T COG3571 133 -------------------------------LRTEHLTGLKTPTLITQGTRDEFGTRD-EVAGYALSDPIEVVWLEDADH 180 (213)
T ss_pred -------------------------------chhhhccCCCCCeEEeecccccccCHH-HHHhhhcCCceEEEEeccCcc
Confidence 012235578899999999999986221 223333333489999999999
Q ss_pred Cccc----------cChhhhHHHHHHHHhhc
Q 018947 282 MVTE----------EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 282 ~~~~----------e~p~~~~~~i~~fl~~~ 302 (348)
.+-- ++-...++.|..|+.++
T Consensus 181 DLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 181 DLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 6432 12245667777777765
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.7e-09 Score=87.64 Aligned_cols=111 Identities=20% Similarity=0.254 Sum_probs=82.6
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHcC--
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI--SDDEPVLSVDDLADQIAEVLNHFG-- 117 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~~~~dl~~~l~~l~-- 117 (348)
+..|||++|.++--.-| ..++ ..+...+...+.|+++.+.||-.+.... ......+++++.++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv~fY-~~Fl--~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~ 78 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY-EEFL--SALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQ 78 (266)
T ss_pred cEEEEEECCCCChHHHH-HHHH--HHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhh
Confidence 45789999988775432 2221 1223334678999999999996554331 023568999999988888776542
Q ss_pred ----CCceeEEEeChhHHHHHHHHHhCC---CCcceEEEecCCCC
Q 018947 118 ----LGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCK 155 (348)
Q Consensus 118 ----~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 155 (348)
..+++|+|||.|++++++++.+.+ .+|.+++++-|...
T Consensus 79 ~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 79 KNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred hcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 357999999999999999999999 78999999998865
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1e-09 Score=93.76 Aligned_cols=239 Identities=15% Similarity=0.180 Sum_probs=136.5
Q ss_pred CCceeEEEEccC------CCCCeEEEeCCCCCChhhhccccccchhhhhh-ccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 28 SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSL-LLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 28 ~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~-~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
..+.+.++.+-+ ...|.||++||.|.--.+..... +......+ ...+-.|+.+|+|=- ++.....
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~-y~~~~~~~a~~~~~vvvSVdYRLA-------PEh~~Pa 141 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPA-YDSFCTRLAAELNCVVVSVDYRLA-------PEHPFPA 141 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCch-hHHHHHHHHHHcCeEEEecCcccC-------CCCCCCc
Confidence 444555555532 35689999999876433211111 11111222 345889999999975 3334456
Q ss_pred CHHHHHHHHHHHHHH------cCCCceeEEEeChhHHHHHHHHHhC------CCCcceEEEecCCCCCCChHHHHHHHHH
Q 018947 101 SVDDLADQIAEVLNH------FGLGAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~------l~~~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (348)
.++|-.+.+..+.++ .+.++++|+|-|.||.+|..+|.+. +-++++.|++-|............+...
T Consensus 142 ~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~ 221 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNL 221 (336)
T ss_pred cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhh
Confidence 777877777777653 3457899999999999999988753 3579999999999886543322211110
Q ss_pred HHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCcc-EEE
Q 018947 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-SLI 247 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl~ 247 (348)
... ........+.+.. .+.++..... +.. ++.-... ..........+| +++
T Consensus 222 ~~~---~~~~~~~~~~~w~-~~lP~~~~~~---~~p-------------------~~np~~~--~~~~d~~~~~lp~tlv 273 (336)
T KOG1515|consen 222 NGS---PELARPKIDKWWR-LLLPNGKTDL---DHP-------------------FINPVGN--SLAKDLSGLGLPPTLV 273 (336)
T ss_pred cCC---cchhHHHHHHHHH-HhCCCCCCCc---CCc-------------------ccccccc--ccccCccccCCCceEE
Confidence 000 0000000011111 1122211000 000 0000000 000112233444 999
Q ss_pred EecCCCCCCchHHHHHHhhccCC--cEEEEecCCCCCccccCh-----hhhHHHHHHHHhhc
Q 018947 248 FVGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTEEQP-----HAMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p-----~~~~~~i~~fl~~~ 302 (348)
+.++.|.+.+....+++++.+.+ +++..++++.|..++-.| .++.+.+.+|+++.
T Consensus 274 ~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 274 VVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 99999999888888888888765 455678999997666433 46778888888764
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-09 Score=84.92 Aligned_cols=226 Identities=12% Similarity=0.104 Sum_probs=106.1
Q ss_pred ceeec-CCceeEEEEccC-----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC-CCCCCCCCC
Q 018947 23 NLIKT-SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAISD 95 (348)
Q Consensus 23 ~~v~~-~~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~~~~ 95 (348)
+.+.. ++.+|+++..-+ ..+++||+..|++-....+ ...+.++...||+|+.||..-| |.|+..
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~------agLA~YL~~NGFhViRyDsl~HvGlSsG~--- 75 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHF------AGLAEYLSANGFHVIRYDSLNHVGLSSGD--- 75 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGG------HHHHHHHHTTT--EEEE---B-----------
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHH------HHHHHHHhhCCeEEEeccccccccCCCCC---
Confidence 44555 445677665432 2458999999997665432 2445677889999999998876 677533
Q ss_pred CCCCCCHHHHHHHHHHHHH---HcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVLN---HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~---~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (348)
-..+++....+++..+++ ..|..++.|+.-|+.|.+|+..|++- .+.-+|..-............ +
T Consensus 76 -I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~a--------l 144 (294)
T PF02273_consen 76 -INEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKA--------L 144 (294)
T ss_dssp ------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHH--------H
T ss_pred -hhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHH--------h
Confidence 356888888888776664 45778899999999999999999844 466666655444421111111 0
Q ss_pred HhhccchhHHHHHHHhhhc-ccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecC
Q 018947 173 YYYGMCGVVKELLLKRYFS-KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (348)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 251 (348)
...+... .+...-. ..+... .-....+..+.+.. + +.......+.+..+.+|++.++++
T Consensus 145 -~~Dyl~~----~i~~lp~dldfeGh----~l~~~vFv~dc~e~-~----------w~~l~ST~~~~k~l~iP~iaF~A~ 204 (294)
T PF02273_consen 145 -GYDYLQL----PIEQLPEDLDFEGH----NLGAEVFVTDCFEH-G----------WDDLDSTINDMKRLSIPFIAFTAN 204 (294)
T ss_dssp -SS-GGGS-----GGG--SEEEETTE----EEEHHHHHHHHHHT-T-----------SSHHHHHHHHTT--S-EEEEEET
T ss_pred -ccchhhc----chhhCCCccccccc----ccchHHHHHHHHHc-C----------CccchhHHHHHhhCCCCEEEEEeC
Confidence 0000000 0000000 000000 00000111111110 0 001112345577889999999999
Q ss_pred CCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChh
Q 018947 252 SSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH 289 (348)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 289 (348)
+|.++ ....++...+.....+++.++|++|.+. |++-
T Consensus 205 ~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 205 DDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENLV 243 (294)
T ss_dssp T-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSHH
T ss_pred CCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hChH
Confidence 99999 4555677777777799999999999766 4553
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-09 Score=92.42 Aligned_cols=122 Identities=10% Similarity=0.045 Sum_probs=74.4
Q ss_pred CceeEEEEcc-----CCCCCeEEEeCCCCCChhh-hcccccc---chhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 29 HGSLSVTIYG-----DQDKPALVTYPDLALNYMS-CFQGLFF---CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 29 ~~~l~~~~~g-----~~~~p~vvllHG~~~~~~~-~~~~~~~---~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
|.+|...++- ....|+||..|+++.+... ....... ......+.++||.|+.+|.||.|.|+....
T Consensus 2 Gv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~----- 76 (272)
T PF02129_consen 2 GVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFD----- 76 (272)
T ss_dssp S-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B------
T ss_pred CCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccc-----
Confidence 4455544442 2345789999998864311 1110100 000012778999999999999999975422
Q ss_pred CCHHHHHHHHHHHHHHc---CC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 100 LSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
....+-++|..++|+.+ .. .+|.++|.|++|..++..|+..|..+++++...+...
T Consensus 77 ~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 77 PMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred cCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 11344455555555443 22 5899999999999999999988999999999876554
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=2e-08 Score=90.95 Aligned_cols=125 Identities=12% Similarity=0.075 Sum_probs=81.6
Q ss_pred CceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhh-----------hhhccCCeEEEEeCCC-CCCCCCCC
Q 018947 29 HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEA-----------CSLLLHNFCIYHINPP-GHEFGAAA 92 (348)
Q Consensus 29 ~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~-----------~~~~~~g~~vi~~D~~-G~G~S~~~ 92 (348)
+..++|..+.. .+.|+||+++|.++.+..+....-..|.. .....+...++.+|+| |+|.|...
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~ 139 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYAD 139 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCC
Confidence 45677766542 46789999999877764431000000000 0112234679999975 88888653
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH-------cCCCceeEEEeChhHHHHHHHHHhC----------CCCcceEEEecCCCC
Q 018947 93 ISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKY----------RHRVLGLILVSPLCK 155 (348)
Q Consensus 93 ~~~~~~~~~~~~~~~dl~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~----------p~~v~~lvl~~~~~~ 155 (348)
.. ....+.++.++|+.++++. ++..+++|+||||||.++..+|.+- .-.++++++.++...
T Consensus 140 ~~--~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 140 KA--DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred CC--CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 22 2345678889999888863 3457899999999999998888752 113789888887664
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.2e-09 Score=79.33 Aligned_cols=171 Identities=18% Similarity=0.181 Sum_probs=114.2
Q ss_pred CeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcee
Q 018947 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVM 122 (348)
Q Consensus 43 p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~ 122 (348)
+.+|++||+.+++...++.. | ...+. . +-.+++. +......+|+++.+...+... .++++
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~-w----e~~l~-~--a~rveq~-----------~w~~P~~~dWi~~l~~~v~a~-~~~~v 62 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSR-W----ESALP-N--ARRVEQD-----------DWEAPVLDDWIARLEKEVNAA-EGPVV 62 (181)
T ss_pred ceEEEecCCCCCChhHHHHH-H----HhhCc-c--chhcccC-----------CCCCCCHHHHHHHHHHHHhcc-CCCeE
Confidence 46899999999987765444 1 11111 1 2222222 123457899999998888877 46799
Q ss_pred EEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCC
Q 018947 123 CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 202 (348)
Q Consensus 123 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (348)
||+||+|+..++.++.+....|+|++|++|+......... . ...-|++.
T Consensus 63 lVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~--------------------~--~~~tf~~~--------- 111 (181)
T COG3545 63 LVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRP--------------------K--HLMTFDPI--------- 111 (181)
T ss_pred EEEecccHHHHHHHHHhhhhccceEEEecCCCccccccch--------------------h--hccccCCC---------
Confidence 9999999999999999888899999999987653220000 0 00000000
Q ss_pred hHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCC
Q 018947 203 SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACG 280 (348)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~g 280 (348)
...++.-|.+++..++|+++ ..++.+++.++ ..++.+.++|
T Consensus 112 ----------------------------------p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg---s~lv~~g~~G 154 (181)
T COG3545 112 ----------------------------------PREPLPFPSVVVASRNDPYVSYEHAEDLANAWG---SALVDVGEGG 154 (181)
T ss_pred ----------------------------------ccccCCCceeEEEecCCCCCCHHHHHHHHHhcc---Hhheeccccc
Confidence 01234568999999999999 45667888887 6788898999
Q ss_pred CCccc---cChhhhHHHHHHHHhh
Q 018947 281 SMVTE---EQPHAMLIPMEYFLMG 301 (348)
Q Consensus 281 H~~~~---e~p~~~~~~i~~fl~~ 301 (348)
|+--. ..-.+....+.+|+.+
T Consensus 155 HiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 155 HINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred ccchhhcCCCcHHHHHHHHHHhhh
Confidence 96543 2345566677777654
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.4e-09 Score=86.53 Aligned_cols=111 Identities=10% Similarity=0.019 Sum_probs=69.5
Q ss_pred CCCeEEEeCCCCCChhhhcccc--ccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGL--FFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD----QIAEVLN 114 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~--~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~----dl~~~l~ 114 (348)
++.+|||+||.+++...+.... .............++++++|+......- ....+.+.++ .+..+++
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~-------~g~~l~~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF-------HGRTLQRQAEFLAEAIKYILE 75 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc-------ccccHHHHHHHHHHHHHHHHH
Confidence 5788999999988876442111 0000001122346889999988753211 1123333333 3444444
Q ss_pred Hc-----CCCceeEEEeChhHHHHHHHHHhCC---CCcceEEEecCCCCCCC
Q 018947 115 HF-----GLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAPS 158 (348)
Q Consensus 115 ~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~ 158 (348)
.+ +.+++++|||||||.++..++...+ +.|+.+|.++++.....
T Consensus 76 ~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 76 LYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 44 4578999999999999988776543 47999999998877554
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.1e-08 Score=81.51 Aligned_cols=100 Identities=20% Similarity=0.282 Sum_probs=79.9
Q ss_pred CeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-Cce
Q 018947 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-GAV 121 (348)
Q Consensus 43 p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~v 121 (348)
|+|+++|+.++....+ ..+ ...+.....|+..+.||.|... ....+++++++...+.|.+... .++
T Consensus 1 ~pLF~fhp~~G~~~~~-~~L------~~~l~~~~~v~~l~a~g~~~~~------~~~~~l~~~a~~yv~~Ir~~QP~GPy 67 (257)
T COG3319 1 PPLFCFHPAGGSVLAY-APL------AAALGPLLPVYGLQAPGYGAGE------QPFASLDDMAAAYVAAIRRVQPEGPY 67 (257)
T ss_pred CCEEEEcCCCCcHHHH-HHH------HHHhccCceeeccccCcccccc------cccCCHHHHHHHHHHHHHHhCCCCCE
Confidence 5799999998886542 222 4556677999999999998533 2457999999988888876654 689
Q ss_pred eEEEeChhHHHHHHHHHhC---CCCcceEEEecCCCC
Q 018947 122 MCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCK 155 (348)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~ 155 (348)
+|+|||+||.+|...|.+- .+.|..++++++...
T Consensus 68 ~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 68 VLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999999999999853 456999999999888
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.1e-09 Score=89.92 Aligned_cols=202 Identities=13% Similarity=0.033 Sum_probs=114.7
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---cC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---FG 117 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---l~ 117 (348)
..|+||++||.+.....-... ...........|+.|+++|+|-.-+- .....++|..+.+..+.++ ++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~--~~~~~~~~~~~g~~vv~vdYrlaPe~-------~~p~~~~d~~~a~~~l~~~~~~~g 148 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTH--DALVARLAAAAGAVVVSVDYRLAPEH-------PFPAALEDAYAAYRWLRANAAELG 148 (312)
T ss_pred CCcEEEEEeCCeeeecChhhh--HHHHHHHHHHcCCEEEecCCCCCCCC-------CCCchHHHHHHHHHHHHhhhHhhC
Confidence 478999999987654332111 11122334467999999999976332 2335666655555555544 33
Q ss_pred --CCceeEEEeChhHHHHHHHHHhCCC----CcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhc
Q 018947 118 --LGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (348)
Q Consensus 118 --~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (348)
.+++.++|+|.||.+++.++..-.+ ...+.+++.|...... .... . ...+............+
T Consensus 149 ~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~----~----~~~~~~~~~~~~~~~~~-- 217 (312)
T COG0657 149 IDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAAS----L----PGYGEADLLDAAAILAW-- 217 (312)
T ss_pred CCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccc----h----hhcCCccccCHHHHHHH--
Confidence 5789999999999999998876543 4788899988877543 1000 0 00010000001111111
Q ss_pred ccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCC-
Q 018947 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRY- 270 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~- 270 (348)
+...+............ . .-....+.. -.|+++++|+.|.+.+....+++++...+
T Consensus 218 -----------------~~~~~~~~~~~~~~p~~----s-pl~~~~~~~-lPP~~i~~a~~D~l~~~~~~~a~~L~~agv 274 (312)
T COG0657 218 -----------------FADLYLGAAPDREDPEA----S-PLASDDLSG-LPPTLIQTAEFDPLRDEGEAYAERLRAAGV 274 (312)
T ss_pred -----------------HHHHhCcCccccCCCcc----C-ccccccccC-CCCEEEEecCCCcchhHHHHHHHHHHHcCC
Confidence 11111100000000000 0 000111333 46899999999999988888888887654
Q ss_pred -cEEEEecCCCCCccc
Q 018947 271 -SALVEVQACGSMVTE 285 (348)
Q Consensus 271 -~~~~~~~~~gH~~~~ 285 (348)
++++.+++..|....
T Consensus 275 ~~~~~~~~g~~H~f~~ 290 (312)
T COG0657 275 PVELRVYPGMIHGFDL 290 (312)
T ss_pred eEEEEEeCCcceeccc
Confidence 678899999995533
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-07 Score=73.24 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=30.4
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
+++.|||+|+||+.|..+|.++. + ..|+++|...+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 57999999999999999999985 3 56888998876
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.2e-08 Score=78.57 Aligned_cols=198 Identities=10% Similarity=0.089 Sum_probs=114.7
Q ss_pred cCCceeEEEEccC-CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHH
Q 018947 27 TSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (348)
Q Consensus 27 ~~~~~l~~~~~g~-~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (348)
-.++.-.+.++|+ ...+.+||+||.-.-...... .-..+..++..||+|..+++ |.+... ..-..++.+.
T Consensus 51 g~~g~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~---clsiv~~a~~~gY~vasvgY---~l~~q~---htL~qt~~~~ 121 (270)
T KOG4627|consen 51 GEGGRQLVDIWGSTNQAKLFIFIHGGYWQEGDRKM---CLSIVGPAVRRGYRVASVGY---NLCPQV---HTLEQTMTQF 121 (270)
T ss_pred CCCCceEEEEecCCCCccEEEEEecchhhcCchhc---ccchhhhhhhcCeEEEEecc---CcCccc---ccHHHHHHHH
Confidence 3455666778884 567889999995322111111 11233567788999998855 444210 0112334444
Q ss_pred HHHHHHHHHHcCC-CceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHH
Q 018947 106 ADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (348)
Q Consensus 106 ~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (348)
.+-+.-+++.... +.+.+-|||.|+.+++....+. ..+|.++++.+........
T Consensus 122 ~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL------------------------ 177 (270)
T KOG4627|consen 122 THGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLREL------------------------ 177 (270)
T ss_pred HHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHH------------------------
Confidence 4445555565543 5577889999999999877753 4467777766554332110
Q ss_pred HHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHH
Q 018947 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 261 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~ 261 (348)
.+.+...+... ..+..+.. . .+ ...+..++.|+|++.|++|.-. ...+.
T Consensus 178 ------~~te~g~dlgL-t~~~ae~~--------------------S-cd-l~~~~~v~~~ilVv~~~~espklieQnrd 228 (270)
T KOG4627|consen 178 ------SNTESGNDLGL-TERNAESV--------------------S-CD-LWEYTDVTVWILVVAAEHESPKLIEQNRD 228 (270)
T ss_pred ------hCCccccccCc-ccchhhhc--------------------C-cc-HHHhcCceeeeeEeeecccCcHHHHhhhh
Confidence 00000000000 00000000 0 01 1224567889999999999654 67777
Q ss_pred HHHhhccCCcEEEEecCCCCCccccCh
Q 018947 262 MTSKIDRRYSALVEVQACGSMVTEEQP 288 (348)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~gH~~~~e~p 288 (348)
+++.+.. +.+..+++.+|+-.+++-
T Consensus 229 f~~q~~~--a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 229 FADQLRK--ASFTLFKNYDHYDIIEET 253 (270)
T ss_pred HHHHhhh--cceeecCCcchhhHHHHh
Confidence 8888887 899999999998776543
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-08 Score=78.86 Aligned_cols=179 Identities=14% Similarity=0.113 Sum_probs=112.0
Q ss_pred eEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----cCCC
Q 018947 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH----FGLG 119 (348)
Q Consensus 44 ~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~----l~~~ 119 (348)
.+||+-|=|+-. .. -......+.++|+.|+.+|-+-+=.+ ..+.++.+.|+..++++ .+.+
T Consensus 4 ~~v~~SGDgGw~-~~-----d~~~a~~l~~~G~~VvGvdsl~Yfw~---------~rtP~~~a~Dl~~~i~~y~~~w~~~ 68 (192)
T PF06057_consen 4 LAVFFSGDGGWR-DL-----DKQIAEALAKQGVPVVGVDSLRYFWS---------ERTPEQTAADLARIIRHYRARWGRK 68 (192)
T ss_pred EEEEEeCCCCch-hh-----hHHHHHHHHHCCCeEEEechHHHHhh---------hCCHHHHHHHHHHHHHHHHHHhCCc
Confidence 466775544332 11 22334677788999999997766443 34677888888877754 4678
Q ss_pred ceeEEEeChhHHHHHHHHHhCCC----CcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccccc
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
+++|+|.|+|+-+.-....+.|. +|..++|+++.....-.. -+..|++....
T Consensus 69 ~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFei------------------------hv~~wlg~~~~ 124 (192)
T PF06057_consen 69 RVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEI------------------------HVSGWLGMGGD 124 (192)
T ss_pred eEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEE------------------------EhhhhcCCCCC
Confidence 99999999999888877777664 699999998876542110 01112221110
Q ss_pred CCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCC-ccEEEEecCCCCCCchHHHHHHhhccCCcEEE
Q 018947 196 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ-CRSLIFVGESSPFHSEAVHMTSKIDRRYSALV 274 (348)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 274 (348)
.. ..+....+.++. .|+++|+|+++.-. .+..+..++.+.+
T Consensus 125 ~~---------------------------------~~~~~pei~~l~~~~v~CiyG~~E~d~-----~cp~l~~~~~~~i 166 (192)
T PF06057_consen 125 DA---------------------------------AYPVIPEIAKLPPAPVQCIYGEDEDDS-----LCPSLRQPGVEVI 166 (192)
T ss_pred cc---------------------------------cCCchHHHHhCCCCeEEEEEcCCCCCC-----cCccccCCCcEEE
Confidence 00 012222333443 48999999888653 2223444458899
Q ss_pred EecCCCCCccccChhhhHHHHHHHHhh
Q 018947 275 EVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 275 ~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.+| +||... ++.+++++.|.+-++.
T Consensus 167 ~lp-GgHHfd-~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 167 ALP-GGHHFD-GDYDALAKRILDALKA 191 (192)
T ss_pred EcC-CCcCCC-CCHHHHHHHHHHHHhc
Confidence 998 666444 5577788888776653
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.1e-09 Score=86.77 Aligned_cols=106 Identities=17% Similarity=0.172 Sum_probs=72.7
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-H---
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN-H--- 115 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~-~--- 115 (348)
..-|+|||+||+... ..|+.. .+....+.||-|+.+|+...+... .........++.+++.+=++ .
T Consensus 15 g~yPVv~f~~G~~~~-~s~Ys~-----ll~hvAShGyIVV~~d~~~~~~~~----~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLI-NSWYSQ-----LLEHVASHGYIVVAPDLYSIGGPD----DTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CCcCEEEEeCCcCCC-HHHHHH-----HHHHHHhCceEEEEecccccCCCC----cchhHHHHHHHHHHHHhcchhhccc
Confidence 467999999999944 444433 346788899999999976654311 11122233334444333221 1
Q ss_pred ---cCCCceeEEEeChhHHHHHHHHHhC-----CCCcceEEEecCCCC
Q 018947 116 ---FGLGAVMCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCK 155 (348)
Q Consensus 116 ---l~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~ 155 (348)
.+..++.|.|||-||-++..++..+ +.+++++++++|.-.
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 1346899999999999999999987 568999999999874
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.4e-09 Score=93.20 Aligned_cols=108 Identities=17% Similarity=0.107 Sum_probs=55.0
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCC-C-CCC-------------C--------
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-A-ISD-------------D-------- 96 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~-~-~~~-------------~-------- 96 (348)
..-|+|||-||++++...+.. ....++++||-|+++|+|..-.+.. . ... .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~------~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSA------ICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHH------HHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCCEEEEeCCCCcchhhHHH------HHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccc
Confidence 345899999999999765432 2368889999999999996411100 0 000 0
Q ss_pred C-CCCC-------HHHHHHHHHHHHHH--------------------------cCCCceeEEEeChhHHHHHHHHHhCCC
Q 018947 97 E-PVLS-------VDDLADQIAEVLNH--------------------------FGLGAVMCMGVTAGAYILTLFAMKYRH 142 (348)
Q Consensus 97 ~-~~~~-------~~~~~~dl~~~l~~--------------------------l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (348)
. .... ++.-++++..+++. ++..++.++|||+||..++..+.+. .
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~ 250 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-T 250 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--T
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-c
Confidence 0 0000 01112233333321 2235789999999999999777765 7
Q ss_pred CcceEEEecCCC
Q 018947 143 RVLGLILVSPLC 154 (348)
Q Consensus 143 ~v~~lvl~~~~~ 154 (348)
++++.|++++..
T Consensus 251 r~~~~I~LD~W~ 262 (379)
T PF03403_consen 251 RFKAGILLDPWM 262 (379)
T ss_dssp T--EEEEES---
T ss_pred CcceEEEeCCcc
Confidence 899999988854
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.5e-09 Score=84.14 Aligned_cols=168 Identities=15% Similarity=0.171 Sum_probs=84.7
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccC-CeEEEEeCCCCC-----CCCCC---------CCCC----------
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGH-----EFGAA---------AISD---------- 95 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~-----G~S~~---------~~~~---------- 95 (348)
.++-||||||++.|+....... ..+...+.+ ++..+.+|-|-- |-... ...+
T Consensus 3 ~k~riLcLHG~~~na~if~~q~---~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQT---SALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHT---HHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCCcCHHHHHHHH---HHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 5678999999999988764444 233555666 888888875421 11100 0000
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC--------CCCcceEEEecCCCCCCChHHHHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLCKAPSWTEWLYNKV 167 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (348)
......+++..+.+.++++..+. -..++|+|.||.+|..++... ...++-+|++++.......
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred cccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 01134466677777777777552 346999999999999888632 1236677777654432110
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEE
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 247 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 247 (348)
. .+.. .-..|++|+|.
T Consensus 151 --------------------------~-------------------------------------~~~~-~~~~i~iPtlH 166 (212)
T PF03959_consen 151 --------------------------Y-------------------------------------QELY-DEPKISIPTLH 166 (212)
T ss_dssp --------------------------G-------------------------------------TTTT---TT---EEEE
T ss_pred --------------------------h-------------------------------------hhhh-ccccCCCCeEE
Confidence 0 0000 12356899999
Q ss_pred EecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCcccc
Q 018947 248 FVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEE 286 (348)
Q Consensus 248 i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 286 (348)
|+|++|.+++ ....+.+...+. .+++.. ++||.+...
T Consensus 167 v~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h-~gGH~vP~~ 205 (212)
T PF03959_consen 167 VIGENDPVVPPERSEALAEMFDPD-ARVIEH-DGGHHVPRK 205 (212)
T ss_dssp EEETT-SSS-HHHHHHHHHHHHHH-EEEEEE-SSSSS----
T ss_pred EEeCCCCCcchHHHHHHHHhccCC-cEEEEE-CCCCcCcCC
Confidence 9999999995 666788887764 455555 599987753
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-07 Score=90.77 Aligned_cols=227 Identities=11% Similarity=0.079 Sum_probs=138.7
Q ss_pred eeecCCceeEEEEccC------CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC----C
Q 018947 24 LIKTSHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA----I 93 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~----~ 93 (348)
.+..+|...++...-+ .+-|.||.+||.+.+.........-+.. .-....|+.|+.+|.||.|.-... .
T Consensus 502 ~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~-~~~s~~g~~v~~vd~RGs~~~G~~~~~~~ 580 (755)
T KOG2100|consen 502 KIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNE-VVVSSRGFAVLQVDGRGSGGYGWDFRSAL 580 (755)
T ss_pred EEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHH-HhhccCCeEEEEEcCCCcCCcchhHHHHh
Confidence 3444666776665432 2347888999988743322111111111 134467999999999998754321 1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHc--CCCceeEEEeChhHHHHHHHHHhCCCCcceE-EEecCCCCCCChHHHHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGL-ILVSPLCKAPSWTEWLYNKVMSN 170 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~l-vl~~~~~~~~~~~~~~~~~~~~~ 170 (348)
........++|....+..+++.. +.+++.++|+|+||++++.++...++++-++ +.++|.........
T Consensus 581 ~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds--------- 651 (755)
T KOG2100|consen 581 PRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDS--------- 651 (755)
T ss_pred hhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecc---------
Confidence 12223456777777777777654 3468999999999999999999998665554 98988877431100
Q ss_pred HHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccE-EEEe
Q 018947 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS-LIFV 249 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-l~i~ 249 (348)
....++++.... +... +.+ ......+..++.|. |++|
T Consensus 652 -------------~~terymg~p~~------~~~~---y~e--------------------~~~~~~~~~~~~~~~LliH 689 (755)
T KOG2100|consen 652 -------------TYTERYMGLPSE------NDKG---YEE--------------------SSVSSPANNIKTPKLLLIH 689 (755)
T ss_pred -------------cccHhhcCCCcc------ccch---hhh--------------------ccccchhhhhccCCEEEEE
Confidence 001111111110 0000 100 12222344555554 9999
Q ss_pred cCCCCCC--chHHHHHHhhccCC--cEEEEecCCCCCccccCh-hhhHHHHHHHHhhc
Q 018947 250 GESSPFH--SEAVHMTSKIDRRY--SALVEVQACGSMVTEEQP-HAMLIPMEYFLMGY 302 (348)
Q Consensus 250 g~~D~~~--~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~~~ 302 (348)
|+.|.-+ +.+..+.+.|...+ .+..++|+..|.+..-.. ..+...+..|+..+
T Consensus 690 Gt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 690 GTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred cCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHH
Confidence 9999988 55666777776644 789999999998876443 56778888888854
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.4e-09 Score=89.79 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=60.9
Q ss_pred CCCCeEEEeCCCCCChhhhccc----------c--ccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC-CCCCCHHHHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQG----------L--FFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD-EPVLSVDDLA 106 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~----------~--~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~~ 106 (348)
..-|.||++||-+.+....... . ........+.++||.|+++|.+|+|+........ ...++...++
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 3457999999988765331100 0 0112346778899999999999999765432111 1122333333
Q ss_pred HHH---------------HHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCC
Q 018947 107 DQI---------------AEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (348)
Q Consensus 107 ~dl---------------~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (348)
..+ ...++.+ +.++|.++|+||||..++.+|+.. ++|++.|..+...
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 221 1222332 336899999999999999888875 6898888765543
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.84 E-value=2e-07 Score=75.77 Aligned_cols=81 Identities=17% Similarity=0.186 Sum_probs=61.1
Q ss_pred hhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHcCCCceeEEEeChhHHHHHHHHHh---CCCCc
Q 018947 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL-NHFGLGAVMCMGVTAGAYILTLFAMK---YRHRV 144 (348)
Q Consensus 69 ~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l-~~l~~~~v~lvGhS~Gg~ia~~~a~~---~p~~v 144 (348)
...+..++.|+++|.+|+|.+... ..+++++++.+...+ +.....+++++|||+||.++..++.+ .++.+
T Consensus 19 ~~~l~~~~~v~~~~~~g~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~ 92 (212)
T smart00824 19 AAALRGRRDVSALPLPGFGPGEPL------PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPP 92 (212)
T ss_pred HHhcCCCccEEEecCCCCCCCCCC------CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCC
Confidence 455667899999999999865422 346777777665544 34445789999999999999988885 45679
Q ss_pred ceEEEecCCCC
Q 018947 145 LGLILVSPLCK 155 (348)
Q Consensus 145 ~~lvl~~~~~~ 155 (348)
.+++++++...
T Consensus 93 ~~l~~~~~~~~ 103 (212)
T smart00824 93 AAVVLLDTYPP 103 (212)
T ss_pred cEEEEEccCCC
Confidence 99999887554
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.7e-08 Score=76.76 Aligned_cols=106 Identities=14% Similarity=0.190 Sum_probs=78.1
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC---
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL--- 118 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~--- 118 (348)
+.-|||+.|++..-..+.... .....+.+.+|.++-+-++.+ ..+....++++-++|+..++++++.
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~---~L~~~lde~~wslVq~q~~Ss-------y~G~Gt~slk~D~edl~~l~~Hi~~~~f 105 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTT---MLNRYLDENSWSLVQPQLRSS-------YNGYGTFSLKDDVEDLKCLLEHIQLCGF 105 (299)
T ss_pred EEEEEEEcccCCCccccccHH---HHHHHHhhccceeeeeecccc-------ccccccccccccHHHHHHHHHHhhccCc
Confidence 356899988877654432111 334566778999999988764 2234557889999999999998764
Q ss_pred -CceeEEEeChhHHHHHHHHH--hCCCCcceEEEecCCCCCC
Q 018947 119 -GAVMCMGVTAGAYILTLFAM--KYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 119 -~~v~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~~~ 157 (348)
..|+|+|||.|+.-.+.|.. ..+..|.+.|+.+|.....
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 47999999999999888884 2355688888888877643
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.1e-07 Score=71.37 Aligned_cols=181 Identities=13% Similarity=0.140 Sum_probs=106.8
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC----CCCCCCC------CCC--------------
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG----HEFGAAA------ISD-------------- 95 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G----~G~S~~~------~~~-------------- 95 (348)
..++-|||+||+-.++....... ......+.+-+.++.+|-|- -+.++.. .+.
T Consensus 3 ~~k~rvLcLHGfrQsg~~F~~Kt---g~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~ 79 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSGKVFSEKT---GSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNE 79 (230)
T ss_pred CCCceEEEecchhhccHHHHHHh---hhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccc
Confidence 35678999999999887653322 12245555567777777662 0111100 000
Q ss_pred --CCCCCCHHHHHHHHHHHHHHcCCCce-eEEEeChhHHHHHHHHHhCCC--------CcceEEEecCCCCCCChHHHHH
Q 018947 96 --DEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRH--------RVLGLILVSPLCKAPSWTEWLY 164 (348)
Q Consensus 96 --~~~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~ 164 (348)
.......++..+-|...+...| ++ .|+|.|.|+.++..++..... .++=+|+++........
T Consensus 80 ~~~~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~----- 152 (230)
T KOG2551|consen 80 ASFTEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK----- 152 (230)
T ss_pred cccccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch-----
Confidence 0112234455566666666554 55 599999999999988872111 13444444332221100
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCcc
Q 018947 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (348)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 244 (348)
.+.......+++|
T Consensus 153 -------------------------------------------------------------------~~~~~~~~~i~~P 165 (230)
T KOG2551|consen 153 -------------------------------------------------------------------LDESAYKRPLSTP 165 (230)
T ss_pred -------------------------------------------------------------------hhhhhhccCCCCC
Confidence 0011112467899
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.|.|.|+.|.+++ .+..+++.+.+ ..++. -.+||++.-.. .+.+.|.+|++..
T Consensus 166 SLHi~G~~D~iv~~~~s~~L~~~~~~--a~vl~-HpggH~VP~~~--~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 166 SLHIFGETDTIVPSERSEQLAESFKD--ATVLE-HPGGHIVPNKA--KYKEKIADFIQSF 220 (230)
T ss_pred eeEEecccceeecchHHHHHHHhcCC--CeEEe-cCCCccCCCch--HHHHHHHHHHHHH
Confidence 9999999999994 44679999997 54444 45999888644 5566666666554
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.5e-09 Score=88.11 Aligned_cols=56 Identities=18% Similarity=0.124 Sum_probs=43.9
Q ss_pred hhhccCCccEEEEecCCCCCC---chHHHHHHhhccCCcEEEEecCCCCCccccChhhh
Q 018947 236 EGLRKLQCRSLIFVGESSPFH---SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAM 291 (348)
Q Consensus 236 ~~l~~i~~Pvl~i~g~~D~~~---~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~ 291 (348)
..+.+++.|++++.|..|.+. .........+++...-+..++++.|+-+++-.++.
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 447789999999999999865 34445667777744568889999999999877764
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.5e-09 Score=85.30 Aligned_cols=51 Identities=16% Similarity=0.334 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHc---CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 105 LADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 105 ~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
+.+...+++... ..++|.|+|.|.||-+|+.+|..+| .|+++|.+++....
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 344455555443 2368999999999999999999998 89999999987764
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.6e-09 Score=84.00 Aligned_cols=92 Identities=18% Similarity=0.149 Sum_probs=50.7
Q ss_pred CeEEEeCCCCCChhhhccccccchhhhhhccCCeE---EEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018947 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC---IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (348)
Q Consensus 43 p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~ 119 (348)
.||||+||.+.+...- |......+.++||. |+++++-................+..++++.|..++++-+.
T Consensus 2 ~PVVlVHG~~~~~~~~-----w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa- 75 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSN-----WSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA- 75 (219)
T ss_dssp --EEEE--TTTTTCGG-----CCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT--
T ss_pred CCEEEECCCCcchhhC-----HHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-
Confidence 4799999999854432 22334678889999 89999854432111000000011234556666666777788
Q ss_pred ceeEEEeChhHHHHHHHHHhC
Q 018947 120 AVMCMGVTAGAYILTLFAMKY 140 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~ 140 (348)
+|.||||||||.++..+....
T Consensus 76 kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHHC
T ss_pred EEEEEEcCCcCHHHHHHHHHc
Confidence 999999999999999877643
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.74 E-value=2e-08 Score=89.60 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=65.6
Q ss_pred cchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCC
Q 018947 64 FCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143 (348)
Q Consensus 64 ~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~ 143 (348)
|...+..+.+.||.+ ..|++|+|.+.+... .....++++.+.+.++.++.+.++++|+||||||.++..++..+|+.
T Consensus 110 ~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~--~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~ 186 (440)
T PLN02733 110 FHDMIEQLIKWGYKE-GKTLFGFGYDFRQSN--RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDV 186 (440)
T ss_pred HHHHHHHHHHcCCcc-CCCcccCCCCccccc--cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHh
Confidence 334445666778755 889999998764411 11223455555566666677788999999999999999999988864
Q ss_pred ----cceEEEecCCCCCC
Q 018947 144 ----VLGLILVSPLCKAP 157 (348)
Q Consensus 144 ----v~~lvl~~~~~~~~ 157 (348)
|+++|.++++....
T Consensus 187 ~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 187 FEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHhHhccEEEECCCCCCC
Confidence 78999998876643
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.6e-07 Score=74.61 Aligned_cols=111 Identities=14% Similarity=0.126 Sum_probs=71.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCC-----CCCCCCCCHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAI-----SDDEPVLSVDDLADQIAEVLN 114 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~~~~~dl~~~l~ 114 (348)
..|.||++||.+.+...+....-| ..+. ..||-|+.++.........-+ ......-....+++.+..+.+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~----~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~ 90 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGW----NALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAA 90 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCH----HHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhh
Confidence 458999999999998765433322 2233 468999999864321111000 000111122233334444555
Q ss_pred HcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 115 HFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 115 ~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+.++ .+|++.|+|.||+++..++..+|+.+.++..++....
T Consensus 91 ~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred hcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 5554 5899999999999999999999999999888876654
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.8e-07 Score=81.84 Aligned_cols=209 Identities=15% Similarity=0.134 Sum_probs=126.9
Q ss_pred CCCeEEEeCCCCCChh-----hhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC----CCCCCCCCCHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYM-----SCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA----ISDDEPVLSVDDLADQIAE 111 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~-----~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~~~~~~~dl~~ 111 (348)
+-|+++++-|.++-.. .+.+.+.+ ..+.+.||.|+.+|-||.-.-... ....-....++|.++-+.-
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~----~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~ 716 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRF----CRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQM 716 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhh----hhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHH
Confidence 4578999988766332 22222211 356678999999999995321110 0111234578899999998
Q ss_pred HHHHcC---CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q 018947 112 VLNHFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKR 188 (348)
Q Consensus 112 ~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (348)
+.++.| .++|.+-|+|+||++++....++|+-++..|.-+|...-.... .....+
T Consensus 717 Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YD----------------------TgYTER 774 (867)
T KOG2281|consen 717 LAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYD----------------------TGYTER 774 (867)
T ss_pred HHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeec----------------------ccchhh
Confidence 888875 4789999999999999999999999887777655543311000 011122
Q ss_pred hhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhh
Q 018947 189 YFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKI 266 (348)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~ 266 (348)
+++-... ++. ......+.... +.+..-....|++||--|.-+ .....+...+
T Consensus 775 YMg~P~~------nE~----------gY~agSV~~~V----------eklpdepnRLlLvHGliDENVHF~Hts~Lvs~l 828 (867)
T KOG2281|consen 775 YMGYPDN------NEH----------GYGAGSVAGHV----------EKLPDEPNRLLLVHGLIDENVHFAHTSRLVSAL 828 (867)
T ss_pred hcCCCcc------chh----------cccchhHHHHH----------hhCCCCCceEEEEecccccchhhhhHHHHHHHH
Confidence 2221110 000 00111111111 223333456899999999877 3333344433
Q ss_pred ccCC--cEEEEecCCCCCccc-cChhhhHHHHHHHHhh
Q 018947 267 DRRY--SALVEVQACGSMVTE-EQPHAMLIPMEYFLMG 301 (348)
Q Consensus 267 ~~~~--~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 301 (348)
...+ -+++++|+-.|.+-. |...-+...+..|+++
T Consensus 829 vkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 829 VKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred HhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 3322 689999999998765 5666778889999886
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.4e-07 Score=77.93 Aligned_cols=110 Identities=11% Similarity=0.110 Sum_probs=63.7
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCe--E--EEEeCCCCC----CC----CCCCCCC---CCCC-CCHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNF--C--IYHINPPGH----EF----GAAAISD---DEPV-LSVD 103 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~--~--vi~~D~~G~----G~----S~~~~~~---~~~~-~~~~ 103 (348)
...|.||+||++++..... .+ +..+. ..|. . ++.++.-|+ |. ...|.-. .... .++.
T Consensus 10 ~~tPTifihG~~gt~~s~~-~m-----i~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~ 83 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFN-HM-----INRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYK 83 (255)
T ss_dssp S-EEEEEE--TTGGCCCCH-HH-----HHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHH
T ss_pred CCCcEEEECCCCCChhHHH-HH-----HHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHH
Confidence 4457999999999876532 12 12332 2332 2 344444442 21 1111000 0112 4678
Q ss_pred HHHHHHHHHHHH----cCCCceeEEEeChhHHHHHHHHHhCCC-----CcceEEEecCCCCC
Q 018947 104 DLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKA 156 (348)
Q Consensus 104 ~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~ 156 (348)
..++++..++.. .+++++.+|||||||..++.|+..+.. ++.++|.++++...
T Consensus 84 ~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 888888887754 467899999999999999999988643 48999999987764
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.9e-07 Score=70.94 Aligned_cols=156 Identities=14% Similarity=0.154 Sum_probs=92.7
Q ss_pred hhhhccCCeEEEEeCCC-CCCCCCC-CCCCC---CCCCCHHHHHHHHHHHHH---HcC-CCceeEEEeChhHHHHHHHHH
Q 018947 68 ACSLLLHNFCIYHINPP-GHEFGAA-AISDD---EPVLSVDDLADQIAEVLN---HFG-LGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 68 ~~~~~~~g~~vi~~D~~-G~G~S~~-~~~~~---~~~~~~~~~~~dl~~~l~---~l~-~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
+.....+||.|++||+- |--.|.. +.... ....+....-.++..+++ .-+ ..++.++|.+|||.++..+.+
T Consensus 60 Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~ 139 (242)
T KOG3043|consen 60 ADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSA 139 (242)
T ss_pred HHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeec
Confidence 34566789999999975 3111111 00000 001122222233333333 334 578999999999999988888
Q ss_pred hCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhch
Q 018947 139 KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS 218 (348)
Q Consensus 139 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (348)
..| .+.+.+.+-|...
T Consensus 140 ~~~-~f~a~v~~hps~~--------------------------------------------------------------- 155 (242)
T KOG3043|consen 140 KDP-EFDAGVSFHPSFV--------------------------------------------------------------- 155 (242)
T ss_pred cch-hheeeeEecCCcC---------------------------------------------------------------
Confidence 776 5666555433211
Q ss_pred hhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCC---cEEEEecCCCCCcc-----ccCh
Q 018947 219 SNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRY---SALVEVQACGSMVT-----EEQP 288 (348)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~---~~~~~~~~~gH~~~-----~e~p 288 (348)
+ .+.+.++++|++++.|+.|.+++ ....+.+.+.... .++.++++.+|-.+ .+.|
T Consensus 156 --------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~P 220 (242)
T KOG3043|consen 156 --------------D-SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSP 220 (242)
T ss_pred --------------C-hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCCh
Confidence 1 12234678999999999999973 3334555555432 47999999999555 2445
Q ss_pred h------hhHHHHHHHHhhc
Q 018947 289 H------AMLIPMEYFLMGY 302 (348)
Q Consensus 289 ~------~~~~~i~~fl~~~ 302 (348)
+ +..+.+..|++.+
T Consensus 221 ed~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 221 EDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 3 4555667777654
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.7e-08 Score=78.74 Aligned_cols=112 Identities=14% Similarity=0.043 Sum_probs=71.0
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---- 115 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---- 115 (348)
+.+..+||+||+..+........ .++...+.-...++.+.||+.|.-..- . ....+...-...+..+++.
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~---aql~~~~~~~~~~i~FsWPS~g~~~~Y-~--~d~~~a~~s~~~l~~~L~~L~~~ 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRA---AQLAHDLGFPGVVILFSWPSDGSLLGY-F--YDRESARFSGPALARFLRDLARA 89 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHH---HHHHHHhCCCceEEEEEcCCCCChhhh-h--hhhhhHHHHHHHHHHHHHHHHhc
Confidence 46789999999988755432222 222333333338999999998752110 0 0112333344455555544
Q ss_pred cCCCceeEEEeChhHHHHHHHHHh----CC-----CCcceEEEecCCCCCC
Q 018947 116 FGLGAVMCMGVTAGAYILTLFAMK----YR-----HRVLGLILVSPLCKAP 157 (348)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~----~p-----~~v~~lvl~~~~~~~~ 157 (348)
.+.++|++++||||+.+.+..... .+ .++..+++++|-....
T Consensus 90 ~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 90 PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 356799999999999999987653 22 3688999998877653
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-06 Score=79.36 Aligned_cols=131 Identities=14% Similarity=0.099 Sum_probs=82.8
Q ss_pred ceeec-CCceeEEEEccC---CCCCeEEEeCCCCCChhh--hccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 23 NLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALNYMS--CFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 23 ~~v~~-~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~--~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
..|.. +|.+|+..++-+ ...|+++..+-++-.... ........+.-..+.++||.|+..|.||.|.|+....
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~-- 99 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFD-- 99 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccc--
Confidence 34444 667887776643 466788888722222221 1111111010014678899999999999999985432
Q ss_pred CCCCC-HHHHHHHHHHHHHHcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 97 EPVLS-VDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 97 ~~~~~-~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
..++ -.+-.-|+.+++.+.. ..+|..+|.|++|...+.+|+..|..+++++...+....
T Consensus 100 -~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 100 -PESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred -eeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 2222 1112224445554433 368999999999999999999999889999888776653
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.9e-07 Score=75.31 Aligned_cols=101 Identities=15% Similarity=0.228 Sum_probs=67.9
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHcCC--
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI-AEVLNHFGL-- 118 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl-~~~l~~l~~-- 118 (348)
+..|+|+-|-.+-.... . +..-++.||.|+.+++||++.|.... .. ..-...++.+ .-.++.++.
T Consensus 243 q~LvIC~EGNAGFYEvG---~-----m~tP~~lgYsvLGwNhPGFagSTG~P---~p-~n~~nA~DaVvQfAI~~Lgf~~ 310 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEVG---V-----MNTPAQLGYSVLGWNHPGFAGSTGLP---YP-VNTLNAADAVVQFAIQVLGFRQ 310 (517)
T ss_pred ceEEEEecCCccceEee---e-----ecChHHhCceeeccCCCCccccCCCC---Cc-ccchHHHHHHHHHHHHHcCCCc
Confidence 45778887755443221 1 12445679999999999999886431 12 2222223333 334566664
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+.+++.|+|.||.-++.+|..||+ |+++||-++.-.
T Consensus 311 edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 311 EDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred cceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhh
Confidence 679999999999999999999996 999998665443
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.6e-08 Score=77.95 Aligned_cols=106 Identities=15% Similarity=0.204 Sum_probs=71.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF---- 116 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---- 116 (348)
.-|+|+|+||+...... +. ..+....++||-|+++++-.- .. + ....+..+....++++..-++++
T Consensus 45 ~yPVilF~HG~~l~ns~-Ys-----~lL~HIASHGfIVVAPQl~~~--~~-p-~~~~Ei~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSF-YS-----QLLAHIASHGFIVVAPQLYTL--FP-P-DGQDEIKSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred CccEEEEeechhhhhHH-HH-----HHHHHHhhcCeEEEechhhcc--cC-C-CchHHHHHHHHHHHHHHhhhhhhCCCC
Confidence 66899999999776433 22 223677789999999998753 11 1 11111223334444444444333
Q ss_pred ---CCCceeEEEeChhHHHHHHHHHhCC--CCcceEEEecCCCCC
Q 018947 117 ---GLGAVMCMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCKA 156 (348)
Q Consensus 117 ---~~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~ 156 (348)
++.++.++|||.||-.|..+|..+. -++.+||.++|....
T Consensus 115 V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 115 VEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred cccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 3468999999999999999998773 248899999987764
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.3e-06 Score=66.19 Aligned_cols=250 Identities=14% Similarity=0.124 Sum_probs=131.8
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCC---C--CCCCCCCCCCHHHHHHHHHHHHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGA---A--AISDDEPVLSVDDLADQIAEVLN 114 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~---~--~~~~~~~~~~~~~~~~dl~~~l~ 114 (348)
.+++.|++++|.++...-+ .-|- ..+...+.+.+.++++...||-.-. + ......+.+++++.++.=.++++
T Consensus 27 ~~~~li~~IpGNPG~~gFY--~~F~-~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFY--TEFA-RHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCceEEEEecCCCCchhHH--HHHH-HHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 5778899999988875322 1111 1112233344679998888885322 1 11123367889999998888887
Q ss_pred HcC--CCceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCCC--CChHHHHHHH------HHHHHHH--hhccchh
Q 018947 115 HFG--LGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKA--PSWTEWLYNK------VMSNLLY--YYGMCGV 180 (348)
Q Consensus 115 ~l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~--~~~~~~~~~~------~~~~~~~--~~~~~~~ 180 (348)
..- ..+++++|||-|+++.+.+.... .-.|.+++++-|.... .+...+...+ ....+.. .....+.
T Consensus 104 ~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~ 183 (301)
T KOG3975|consen 104 EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPG 183 (301)
T ss_pred HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChH
Confidence 653 25899999999999999988743 2248888887665421 0000000000 0000000 0111111
Q ss_pred HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHH----HHHHHHcCCccHHhhhccCCccEEEEecCCCCCC
Q 018947 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVW----HFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~ 256 (348)
..+.++-++....... ..++...-.......-.++.. .-+..... -..+.+.+-.+-+.+.+|..|.++
T Consensus 184 ~ir~~Li~~~l~~~n~-----p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~--~d~e~~een~d~l~Fyygt~DgW~ 256 (301)
T KOG3975|consen 184 FIRFILIKFMLCGSNG-----PQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTT--RDIEYCEENLDSLWFYYGTNDGWV 256 (301)
T ss_pred HHHHHHHHHhcccCCC-----cHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHH--hHHHHHHhcCcEEEEEccCCCCCc
Confidence 1122222222111100 122221111100000000000 00000000 011223344567889999999999
Q ss_pred c--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 257 S--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 257 ~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+ ....+.+.++..+.++-+ ++.-|..-..+.+..+..+.+.++
T Consensus 257 p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 257 PSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred chHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhhC
Confidence 4 455688888875566666 679999888888888888877653
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.8e-08 Score=85.70 Aligned_cols=108 Identities=14% Similarity=0.160 Sum_probs=62.9
Q ss_pred CCCCeEEEeCCCCCCh--hhhccccccchhhhhhcc---CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 018947 40 QDKPALVTYPDLALNY--MSCFQGLFFCPEACSLLL---HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN 114 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~--~~~~~~~~~~~~~~~~~~---~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~ 114 (348)
..+|++|++||+..+. ..|...+ ...++. .+++||++|+...-..... ........+.+.+..+|.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~-----~~all~~~~~d~NVI~VDWs~~a~~~Y~----~a~~n~~~vg~~la~~l~ 139 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDM-----IKALLQKDTGDYNVIVVDWSRGASNNYP----QAVANTRLVGRQLAKFLS 139 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHH-----HHHHHCC--S-EEEEEEE-HHHHSS-HH----HHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHH-----HHHHHhhccCCceEEEEcchhhcccccc----chhhhHHHHHHHHHHHHH
Confidence 4789999999999988 2333222 133444 4899999999643110000 001112233333444433
Q ss_pred ----Hc--CCCceeEEEeChhHHHHHHHHHhCCC--CcceEEEecCCCCC
Q 018947 115 ----HF--GLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKA 156 (348)
Q Consensus 115 ----~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 156 (348)
.. ..++++|+|||+||.+|-..+..... +|.+++.++|+...
T Consensus 140 ~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 140 FLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred HHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 32 34789999999999999988887777 89999999987764
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.8e-05 Score=70.18 Aligned_cols=80 Identities=16% Similarity=0.153 Sum_probs=61.3
Q ss_pred hhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-----CCceeEEEeChhHHHHHHHHHhCC
Q 018947 67 EACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYR 141 (348)
Q Consensus 67 ~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p 141 (348)
.+-..+..|+.|+.+.+.-. + ....+++|.......+++.+. ..+++++|-+.||..++.+|+.+|
T Consensus 92 evG~AL~~GHPvYFV~F~p~-------P--~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFFPE-------P--EPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred HHHHHHHcCCCeEEEEecCC-------C--CCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc
Confidence 44566778999988866422 1 234688888877777775542 348999999999999999999999
Q ss_pred CCcceEEEecCCCC
Q 018947 142 HRVLGLILVSPLCK 155 (348)
Q Consensus 142 ~~v~~lvl~~~~~~ 155 (348)
+.+.-+|+.+++..
T Consensus 163 d~~gplvlaGaPls 176 (581)
T PF11339_consen 163 DLVGPLVLAGAPLS 176 (581)
T ss_pred CccCceeecCCCcc
Confidence 99999998876654
|
Their function is unknown. |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.8e-05 Score=71.68 Aligned_cols=127 Identities=14% Similarity=0.094 Sum_probs=77.5
Q ss_pred CceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhhh------------hccCCeEEEEeCCC-CCCCCCC
Q 018947 29 HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACS------------LLLHNFCIYHINPP-GHEFGAA 91 (348)
Q Consensus 29 ~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~------------~~~~g~~vi~~D~~-G~G~S~~ 91 (348)
+..++|..+.. .+.|.||.+.|.++.+..+....-..|.... ...+..+++.+|+| |.|.|..
T Consensus 23 ~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~ 102 (415)
T PF00450_consen 23 NAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYG 102 (415)
T ss_dssp TEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EE
T ss_pred CcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeec
Confidence 55777776542 5679999999998876654211111111111 11123579999955 9999875
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc-------CCCceeEEEeChhHHHHHHHHH----hC------CCCcceEEEecCCC
Q 018947 92 AISDDEPVLSVDDLADQIAEVLNHF-------GLGAVMCMGVTAGAYILTLFAM----KY------RHRVLGLILVSPLC 154 (348)
Q Consensus 92 ~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~----~~------p~~v~~lvl~~~~~ 154 (348)
.... ....+.++.++++..+|+.+ ...+++|.|-|+||..+-.+|. .. +-.++++++.++..
T Consensus 103 ~~~~-~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 103 NDPS-DYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp SSGG-GGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred cccc-cccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 4221 13457888899988888543 4468999999999998776665 23 23489999998887
Q ss_pred CC
Q 018947 155 KA 156 (348)
Q Consensus 155 ~~ 156 (348)
..
T Consensus 182 dp 183 (415)
T PF00450_consen 182 DP 183 (415)
T ss_dssp BH
T ss_pred cc
Confidence 64
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.5e-05 Score=67.14 Aligned_cols=113 Identities=11% Similarity=-0.025 Sum_probs=71.6
Q ss_pred ccceeecCCceeEEEEcc---CCCCCeEEEeCCCCCChhhhccccccchhhhhh-ccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSL-LLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~-~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
++..++.++..+-..... ......||++-|.++.................+ ...+-+|+++++||.|.|...
T Consensus 113 kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~---- 188 (365)
T PF05677_consen 113 KRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP---- 188 (365)
T ss_pred eeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC----
Confidence 455666666655332222 245668999977665544311000000111222 245899999999999998633
Q ss_pred CCCCCHHHHHHHHHHHHHHcC-------CCceeEEEeChhHHHHHHHHHhC
Q 018947 97 EPVLSVDDLADQIAEVLNHFG-------LGAVMCMGVTAGAYILTLFAMKY 140 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l~-------~~~v~lvGhS~Gg~ia~~~a~~~ 140 (348)
.+.++++.|-.+.++.+. .+++++.|||+||.++...+.++
T Consensus 189 ---~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 189 ---PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ---CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 357888888887776552 26799999999999999766554
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.2e-06 Score=70.46 Aligned_cols=130 Identities=16% Similarity=0.142 Sum_probs=88.0
Q ss_pred ccceeecCCceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCC-------CCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPP-------GHEF 88 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~-------G~G~ 88 (348)
+...+..++.+..|..+-+ ...|.||++||-.++...+....-| ..+. ..||-|+.+|-- +.|.
T Consensus 36 ~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~----d~lAd~~gFlV~yPdg~~~~wn~~~~~~ 111 (312)
T COG3509 36 SVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGW----DALADREGFLVAYPDGYDRAWNANGCGN 111 (312)
T ss_pred CccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccch----hhhhcccCcEEECcCccccccCCCcccc
Confidence 3445566777777766533 3457899999999998876544433 2333 459999998522 1222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC--ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCC
Q 018947 89 GAAAISDDEPVLSVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (348)
Q Consensus 89 S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (348)
+-.+.......-....+++.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++.+++...
T Consensus 112 ~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 112 WFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 2111111122334555566666677777776 89999999999999999999999999988887665
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=9.5e-07 Score=72.71 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=31.8
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE 87 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 87 (348)
+-|.|||-||+|++..-+ ..+ -..++++||.|.+++.|-+.
T Consensus 117 k~PvvvFSHGLggsRt~Y-Sa~-----c~~LAShG~VVaavEHRD~S 157 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLY-SAY-----CTSLASHGFVVAAVEHRDRS 157 (399)
T ss_pred CccEEEEecccccchhhH-HHH-----hhhHhhCceEEEEeecccCc
Confidence 448999999999986543 222 15788899999999999873
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.4e-06 Score=71.84 Aligned_cols=84 Identities=13% Similarity=0.080 Sum_probs=50.1
Q ss_pred hhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHcCC---CceeEEEeChhHHHHHHHHHhC
Q 018947 67 EACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL---NHFGL---GAVMCMGVTAGAYILTLFAMKY 140 (348)
Q Consensus 67 ~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l---~~l~~---~~v~lvGhS~Gg~ia~~~a~~~ 140 (348)
.+..++++||.|+++|+.|.|.. .. .....-....+-+.+.. ...++ .++.++|||-||.-++..|...
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~---y~--~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTP---YL--NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCc---cc--CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 34678899999999999999861 11 01111222223333322 22232 5799999999999887555432
Q ss_pred ----CCC---cceEEEecCCCC
Q 018947 141 ----RHR---VLGLILVSPLCK 155 (348)
Q Consensus 141 ----p~~---v~~lvl~~~~~~ 155 (348)
|+. +.+.+..+++..
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPPAD 114 (290)
T ss_pred HHhCcccccceeEEeccCCccC
Confidence 432 566666555443
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.28 E-value=9.5e-06 Score=70.10 Aligned_cols=113 Identities=15% Similarity=0.117 Sum_probs=74.4
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~ 120 (348)
..|+||++||.|.--......+.+-..+..++. ...+++.|+--... . . ........+.+.++-...+++..|.++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~-~-~-~~~~yPtQL~qlv~~Y~~Lv~~~G~~n 196 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSS-D-E-HGHKYPTQLRQLVATYDYLVESEGNKN 196 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEecccccc-c-c-CCCcCchHHHHHHHHHHHHHhccCCCe
Confidence 469999999987543222111101011123343 55888888875520 0 0 011234678888888888887888899
Q ss_pred eeEEEeChhHHHHHHHHHhC--CC---CcceEEEecCCCCCC
Q 018947 121 VMCMGVTAGAYILTLFAMKY--RH---RVLGLILVSPLCKAP 157 (348)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~--p~---~v~~lvl~~~~~~~~ 157 (348)
++|+|-|.||.+++.+.... ++ .-+++|+++|.....
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999999887632 11 267999999988764
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.3e-05 Score=65.74 Aligned_cols=120 Identities=13% Similarity=0.162 Sum_probs=72.1
Q ss_pred ecCCceeEEEEccC------CCC-CeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCC-CCCCCC----
Q 018947 26 KTSHGSLSVTIYGD------QDK-PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-FGAAAI---- 93 (348)
Q Consensus 26 ~~~~~~l~~~~~g~------~~~-p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G-~S~~~~---- 93 (348)
+.-+.++.|..+-+ .+- |.|||+||.|..+...+.. +..|.-.|+.+.+-.+ .--+|.
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~----------l~sg~gaiawa~pedqcfVlAPQy~~i 237 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKV----------LSSGIGAIAWAGPEDQCFVLAPQYNPI 237 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhh----------hhcCccceeeecccCceEEEccccccc
Confidence 34567888887643 233 8899999998877654322 2334444444443333 000000
Q ss_pred -CCCCC--CCCHHHHHHHHH-HHHHHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 94 -SDDEP--VLSVDDLADQIA-EVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 94 -~~~~~--~~~~~~~~~dl~-~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
...+. ..-.....+-+. .+.++.++ .++.++|.|+||+-++.++.++|+.+.+.++++....
T Consensus 238 f~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 238 FADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred ccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 00001 111223333333 23345555 5799999999999999999999999999999987554
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.3e-06 Score=72.22 Aligned_cols=105 Identities=17% Similarity=0.192 Sum_probs=77.3
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeE---EEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFC---IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~ 118 (348)
.-++|++||++.+...+. .+- ..+...|+. ++.+++++... ........+++..-+.+++...+.
T Consensus 59 ~~pivlVhG~~~~~~~~~-~~~-----~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~ql~~~V~~~l~~~ga 126 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFL-PLD-----YRLAILGWLTNGVYAFELSGGDG------TYSLAVRGEQLFAYVDEVLAKTGA 126 (336)
T ss_pred CceEEEEccCcCCcchhh-hhh-----hhhcchHHHhcccccccccccCC------CccccccHHHHHHHHHHHHhhcCC
Confidence 448999999966654432 221 223344666 88888886511 112345667777888888888888
Q ss_pred CceeEEEeChhHHHHHHHHHhCC--CCcceEEEecCCCCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCKAPS 158 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~ 158 (348)
+++.++||||||.++..++...+ .+|+.++.++++.....
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 99999999999999999998888 78999999998776543
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.2e-05 Score=68.01 Aligned_cols=117 Identities=9% Similarity=0.048 Sum_probs=72.1
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-AISDDEPVLSVDDLADQIAEVLNHFGL 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~-~~~~~~~~~~~~~~~~dl~~~l~~l~~ 118 (348)
.++.++||+||+..+....-... .++..-.......+.+.||..|.--. ........++-.++..-|..+.+....
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~---aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~ 190 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRT---AQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV 190 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHH---HHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC
Confidence 46779999999976654332111 22233444556788999998764210 001111234444454445555555567
Q ss_pred CceeEEEeChhHHHHHHHHHhC--------CCCcceEEEecCCCCCCCh
Q 018947 119 GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLCKAPSW 159 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~~~~~ 159 (348)
++++|++||||..++++...+. +.+++-+|+.+|-...+.+
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF 239 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVF 239 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhH
Confidence 8899999999999999877642 3357778887776665443
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.3e-06 Score=70.81 Aligned_cols=53 Identities=13% Similarity=0.193 Sum_probs=41.6
Q ss_pred HHHHHHHHHH-HcCCC--ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 105 LADQIAEVLN-HFGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 105 ~~~dl~~~l~-~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
+.++|..+++ ++... +..++|+||||..|+.++.++|+.+.+++.+++.....
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 4456666664 34432 27999999999999999999999999999999876543
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00048 Score=59.26 Aligned_cols=133 Identities=11% Similarity=0.111 Sum_probs=77.1
Q ss_pred CccceeecCCceeEEEEc---cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC--CCCCC---
Q 018947 20 GKDNLIKTSHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH--EFGAA--- 91 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~---g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~--G~S~~--- 91 (348)
.+..++..++.++-.... +.....+||++||.+.+.. |-... .+.-..+-..||..+++.+|.- .....
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d-~p~~i--~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~ 138 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPD-WPGLI--APLRRELPDHGWATLSITLPDPAPPASPNRAT 138 (310)
T ss_pred hhcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCC-cHhHH--HHHHHHhhhcCceEEEecCCCcccccCCccCC
Confidence 455566665555433322 3334558999999998863 21111 1222344567999999988871 10000
Q ss_pred -----CCCC-CC-CC-------------CCHHHHHH----HHH---HHHHHcCCCceeEEEeChhHHHHHHHHHhCCC-C
Q 018947 92 -----AISD-DE-PV-------------LSVDDLAD----QIA---EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-R 143 (348)
Q Consensus 92 -----~~~~-~~-~~-------------~~~~~~~~----dl~---~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~ 143 (348)
+... .. .. .....+.+ -+. ++++..+..+++|+||+.|+..++.|.+..+. .
T Consensus 139 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~ 218 (310)
T PF12048_consen 139 EAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPM 218 (310)
T ss_pred CCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcc
Confidence 0000 00 00 11122222 222 33344565669999999999999999998765 4
Q ss_pred cceEEEecCCCC
Q 018947 144 VLGLILVSPLCK 155 (348)
Q Consensus 144 v~~lvl~~~~~~ 155 (348)
++++|++++...
T Consensus 219 ~daLV~I~a~~p 230 (310)
T PF12048_consen 219 PDALVLINAYWP 230 (310)
T ss_pred cCeEEEEeCCCC
Confidence 999999988544
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.5e-06 Score=68.06 Aligned_cols=89 Identities=12% Similarity=-0.017 Sum_probs=45.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHc
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD----QIAEVLNHF 116 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~----dl~~~l~~l 116 (348)
....|||+||+.++...|.... ..+.. ..+.+.--.+...++.... ......++..++ +|.+.++..
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~---~~l~~-~~~~~~~~~i~~~~~~~n~-----~~T~~gI~~~g~rL~~eI~~~~~~~ 73 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLK---NHLEK-IPEDLPNARIVVLGYSNNE-----FKTFDGIDVCGERLAEEILEHIKDY 73 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHH---HHHHH-hhhhcchhhhhhhcccccc-----cccchhhHHHHHHHHHHHHHhcccc
Confidence 3457999999999987762111 11111 1112211111122221110 011234444444 444444444
Q ss_pred CC--CceeEEEeChhHHHHHHHHH
Q 018947 117 GL--GAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 117 ~~--~~v~lvGhS~Gg~ia~~~a~ 138 (348)
.. .++.+|||||||.++-.+..
T Consensus 74 ~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 74 ESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccccccceEEEecccHHHHHHHHH
Confidence 43 48999999999999875544
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.4e-05 Score=58.49 Aligned_cols=104 Identities=18% Similarity=0.164 Sum_probs=62.9
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCC---------C-----CCCCCCCCCHHHHHH
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA---------A-----ISDDEPVLSVDDLAD 107 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~---------~-----~~~~~~~~~~~~~~~ 107 (348)
..+||++||.+.++.+|.+.+ ..+-.++..-|++..|-.-.+.. + .........+...++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~------~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~ 76 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFL------KQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAAD 76 (206)
T ss_pred eEEEEEEecCCCCCccHHHHH------HcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHH
Confidence 457999999999998874322 33333455555553332110000 0 000012334555566
Q ss_pred HHHHHHHHc---C--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEec
Q 018947 108 QIAEVLNHF---G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVS 151 (348)
Q Consensus 108 dl~~~l~~l---~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 151 (348)
.+..+++.. + ..++.+-|.|+||++++..+..++..+.+.+-..
T Consensus 77 ~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s 125 (206)
T KOG2112|consen 77 NIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALS 125 (206)
T ss_pred HHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccc
Confidence 666666542 2 3578999999999999999999987777766443
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.7e-05 Score=67.91 Aligned_cols=164 Identities=10% Similarity=0.065 Sum_probs=101.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH------
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN------ 114 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~------ 114 (348)
..|.++++||.+.-...-.. .+.|+....+..+-..|-++|++.--. ..++...++.+..+.+
T Consensus 175 ~spl~i~aps~p~ap~tSd~-~~~wqs~lsl~gevvev~tfdl~n~ig----------G~nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDR-MWSWQSRLSLKGEVVEVPTFDLNNPIG----------GANIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchH-HHhHHHHHhhhceeeeeccccccCCCC----------CcchHHHHHHHHHHhhhhhhhh
Confidence 56788999998821111111 112233344555556678888875311 1355555555555443
Q ss_pred --HcCCCceeEEEeChhHHHHHHHHHhCCC-CcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhc
Q 018947 115 --HFGLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (348)
Q Consensus 115 --~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (348)
++...+++|+|.|||+.++++......+ .|+++|.++=.......
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg-------------------------------- 291 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG-------------------------------- 291 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc--------------------------------
Confidence 3445789999999999988887765543 37777776533321100
Q ss_pred ccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccC
Q 018947 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR 269 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~ 269 (348)
+. ....+.+-.++.|+||+.|..|..+ ..-+++++++..
T Consensus 292 pr--------------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA- 332 (784)
T KOG3253|consen 292 PR--------------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA- 332 (784)
T ss_pred cc--------------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-
Confidence 00 0111223356789999999999999 344567777775
Q ss_pred CcEEEEecCCCCCcccc
Q 018947 270 YSALVEVQACGSMVTEE 286 (348)
Q Consensus 270 ~~~~~~~~~~gH~~~~e 286 (348)
..+++++.+++|.+-+.
T Consensus 333 ~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 333 EVELHVIGGADHSMAIP 349 (784)
T ss_pred cceEEEecCCCccccCC
Confidence 47899999999977653
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.01 E-value=5.3e-05 Score=68.92 Aligned_cols=112 Identities=12% Similarity=0.038 Sum_probs=69.5
Q ss_pred CCCCeEEEeCCCCCChhh-hccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHH
Q 018947 40 QDKPALVTYPDLALNYMS-CFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAIS---DDEPVLSVDDLADQIAEVLN 114 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~-~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~~~dl~~~l~ 114 (348)
+++|++|++.|= +.... +...- .+..+++ -|-.|+++++|-+|.|.+... ..-...+.++..+|+..+++
T Consensus 27 ~~gpifl~~ggE-~~~~~~~~~~~----~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~ 101 (434)
T PF05577_consen 27 PGGPIFLYIGGE-GPIEPFWINNG----FMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIR 101 (434)
T ss_dssp TTSEEEEEE--S-S-HHHHHHH-H----HHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CccchhhhcCC----hHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHH
Confidence 457777777443 33322 21111 1123332 378899999999999975211 12346789999999999886
Q ss_pred HcC-------CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 115 HFG-------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 115 ~l~-------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
++. ..|++++|-|+||++|..+-.+||+.|.+.+..+++...
T Consensus 102 ~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 102 YVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred HHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 543 247999999999999999999999999999998877753
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=9.4e-05 Score=66.20 Aligned_cols=106 Identities=8% Similarity=0.031 Sum_probs=62.8
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCC----eEEEEeCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN----FCIYHINPPGHE-FGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g----~~vi~~D~~G~G-~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
..|+|+++||-. |....-....+..+.+.| ..|+.+|..+.. ++. ..+ ....-.+.++++|.-++++
T Consensus 208 ~~PvlyllDG~~-----w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~-el~--~~~~f~~~l~~eLlP~I~~ 279 (411)
T PRK10439 208 ERPLAILLDGQF-----WAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ-ELP--CNADFWLAVQQELLPQVRA 279 (411)
T ss_pred CCCEEEEEECHH-----hhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccc-cCC--chHHHHHHHHHHHHHHHHH
Confidence 458999998843 221111112224444555 346777763211 111 000 0111123344566555654
Q ss_pred c-----CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCC
Q 018947 116 F-----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (348)
Q Consensus 116 l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (348)
. +.++.+|+|+||||..|+.++.++|+++.+++.+++..
T Consensus 280 ~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 280 IAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred hCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 2 23568899999999999999999999999999998754
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00016 Score=60.57 Aligned_cols=102 Identities=7% Similarity=0.066 Sum_probs=62.4
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhcc--CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH--- 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~--- 115 (348)
...|||+.||+|.+..... + ..+..++. .++.+..+- .|-|..+ .-...+.+.++.+.+-+..
T Consensus 25 ~~~PvViwHGlgD~~~~~~--~---~~~~~~i~~~~~~pg~~v~-ig~~~~~------s~~~~~~~Qv~~vce~l~~~~~ 92 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGK--V---SNLTQFLINHSGYPGTCVE-IGNGVQD------SLFMPLRQQASIACEKIKQMKE 92 (306)
T ss_pred CCCCEEEECCCCcccCCch--H---HHHHHHHHhCCCCCeEEEE-ECCCccc------ccccCHHHHHHHHHHHHhcchh
Confidence 3457999999995543210 1 11133443 355444443 2322211 1123556666665555533
Q ss_pred cCCCceeEEEeChhHHHHHHHHHhCCC--CcceEEEecCCCC
Q 018947 116 FGLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCK 155 (348)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 155 (348)
+. +-++++|+|.||.++-.++.+.|+ .|+.+|.+++...
T Consensus 93 L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 93 LS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred hc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 32 459999999999999999999987 4999999986654
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.004 Score=56.21 Aligned_cols=134 Identities=11% Similarity=0.054 Sum_probs=73.6
Q ss_pred ccceeecC---CceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhh----------------hhhccCCeE
Q 018947 21 KDNLIKTS---HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEA----------------CSLLLHNFC 77 (348)
Q Consensus 21 ~~~~v~~~---~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~----------------~~~~~~g~~ 77 (348)
..-++.++ +..++|..+.+ ...|.|+.+-|.++.+.......-..+.. ...-.+..+
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 117 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMAN 117 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCc
Confidence 33445543 34566665432 35689999998877654221000000000 011123357
Q ss_pred EEEeC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHc---CCCceeEEEeChhHHHHHHHHHh----C-----
Q 018947 78 IYHIN-PPGHEFGAAAISDDEPVLSVDDLADQIAEVL----NHF---GLGAVMCMGVTAGAYILTLFAMK----Y----- 140 (348)
Q Consensus 78 vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l----~~l---~~~~v~lvGhS~Gg~ia~~~a~~----~----- 140 (348)
++.+| .-|.|.|....+. ....+. +.++++..++ +.. ...+++|+|.|+||..+-.+|.+ .
T Consensus 118 llfiDqPvGtGfSy~~~~~-~~~~d~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 118 IIFLDQPVGSGFSYSKTPI-DKTGDI-SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred EEEecCCCCCCccCCCCCC-CccCCH-HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 99999 6699988643221 111122 2224444444 332 34689999999999977766653 1
Q ss_pred -CCCcceEEEecCCCCC
Q 018947 141 -RHRVLGLILVSPLCKA 156 (348)
Q Consensus 141 -p~~v~~lvl~~~~~~~ 156 (348)
+-.++++++-++....
T Consensus 196 ~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 196 PPINLQGYMLGNPVTYM 212 (433)
T ss_pred CcccceeeEecCCCcCc
Confidence 1257898888876543
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00057 Score=56.84 Aligned_cols=60 Identities=10% Similarity=0.218 Sum_probs=46.2
Q ss_pred cCCccEEEEecCCCCCC--chHHHHHHhhccC--CcEEEEecCCCCCccc-cChhhhHHHHHHHH
Q 018947 240 KLQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTE-EQPHAMLIPMEYFL 299 (348)
Q Consensus 240 ~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl 299 (348)
...+|-|+++++.|.++ ...++..+..... .++.+.++++.|..|+ .+|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 44689999999999998 3444444333332 3778888999999988 79999999999885
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00026 Score=57.30 Aligned_cols=209 Identities=10% Similarity=0.061 Sum_probs=110.6
Q ss_pred hhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHH--------HHHH------HHcCCCceeEEEeChhHHHHH
Q 018947 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI--------AEVL------NHFGLGAVMCMGVTAGAYILT 134 (348)
Q Consensus 69 ~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl--------~~~l------~~l~~~~v~lvGhS~Gg~ia~ 134 (348)
.....++...+++.-|-+|....+ ......-+++.|+ .++. ...|..++.++|-||||.+|.
T Consensus 135 ~p~~k~~i~tmvle~pfYgqr~p~----~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~ 210 (371)
T KOG1551|consen 135 KPINKREIATMVLEKPFYGQRVPE----EQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIAN 210 (371)
T ss_pred CchhhhcchheeeecccccccCCH----HHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHH
Confidence 466778888899999989875422 1111112222232 2222 234567899999999999999
Q ss_pred HHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCC-CC-CChHHHHHHHHH
Q 018947 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA-QV-PESDIVQACRRL 212 (348)
Q Consensus 135 ~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 212 (348)
.....++.-|.-+=+.++........+...... ...++++......... .. +...+.... +.
T Consensus 211 ~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~---------------~s~~~~~~~~t~~~~~~~r~p~Q~~~~~~-~~ 274 (371)
T KOG1551|consen 211 QVGSLHQKPVATAPCLNSSKASVSATEGLLLQD---------------TSKMKRFNQTTNKSGYTSRNPAQSYHLLS-KE 274 (371)
T ss_pred hhcccCCCCccccccccccccchhhhhhhhhhh---------------hHHHHhhccCcchhhhhhhCchhhHHHHH-HH
Confidence 888877766655544444333222111110000 0011111110000000 00 001111111 11
Q ss_pred HhhhchhhHHHHHHHHcCCccHHhhhccCCcc-----EEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCcc-
Q 018947 213 LDERQSSNVWHFLEAINGRPDISEGLRKLQCR-----SLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVT- 284 (348)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-----vl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~- 284 (348)
..+........+++...+ -...+.+..+| +.++.+++|..+ .....+.+.+|+ +++..++ +||...
T Consensus 275 ~srn~~~E~~~~Mr~vmd---~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg--~eVr~~e-gGHVsay 348 (371)
T KOG1551|consen 275 QSRNSRKESLIFMRGVMD---ECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPG--CEVRYLE-GGHVSAY 348 (371)
T ss_pred hhhcchHHHHHHHHHHHH---hhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCC--CEEEEee-cCceeee
Confidence 111222223333333321 12223344444 677889999887 456678999998 8888887 999654
Q ss_pred ccChhhhHHHHHHHHhhcc
Q 018947 285 EEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 285 ~e~p~~~~~~i~~fl~~~~ 303 (348)
+-+-+.+.+.|.+-|+++.
T Consensus 349 l~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 349 LFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred ehhchHHHHHHHHHHHhhh
Confidence 4688899999999998874
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00057 Score=59.53 Aligned_cols=146 Identities=12% Similarity=0.092 Sum_probs=89.8
Q ss_pred CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhc--cchhHHHHHHHhhhcccc
Q 018947 117 GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG--MCGVVKELLLKRYFSKEV 194 (348)
Q Consensus 117 ~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 194 (348)
.++++++.|.|==|..++..|+ ...||.+++-+.-....- . ..+....+..| +...+
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~--~-----~~l~h~y~~yG~~ws~a~------------- 228 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNM--K-----ANLEHQYRSYGGNWSFAF------------- 228 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCc--H-----HHHHHHHHHhCCCCccch-------------
Confidence 5789999999999999997777 667899888654332211 0 11111111111 11111
Q ss_pred cCCCCCCChHHHHHHHHHHhh-hchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCc
Q 018947 195 RGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYS 271 (348)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~ 271 (348)
...+..-+.. .+...+...+. + .|......++++|.++|.|..|.+. +....+...+++ ..
T Consensus 229 -----------~dY~~~gi~~~l~tp~f~~L~~-i---vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K 292 (367)
T PF10142_consen 229 -----------QDYYNEGITQQLDTPEFDKLMQ-I---VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EK 292 (367)
T ss_pred -----------hhhhHhCchhhcCCHHHHHHHH-h---cCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-Ce
Confidence 1111110000 11111111111 1 3444445677999999999999987 567778888887 46
Q ss_pred EEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 272 ALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 272 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+..+||++|..-. ..+.+.|..|+...
T Consensus 293 ~lr~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 293 YLRYVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred eEEeCCCCCcccch---HHHHHHHHHHHHHH
Confidence 78999999998775 66788888998875
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.89 E-value=8.8e-05 Score=68.79 Aligned_cols=111 Identities=17% Similarity=0.099 Sum_probs=65.4
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccC--CeEEEEeCCC-CC-CCCCCCCCCCCCCCCHHHHHHH---HHHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPP-GH-EFGAAAISDDEPVLSVDDLADQ---IAEV 112 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~--g~~vi~~D~~-G~-G~S~~~~~~~~~~~~~~~~~~d---l~~~ 112 (348)
.+.|+||++||.+.......... ...+... ++.|+++++| |. |.-............+.|.... +.+-
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~-----~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~ 167 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYP-----GDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDN 167 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCC-----hHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 35689999999765432211101 0223322 4999999999 32 2211110111223445555544 4444
Q ss_pred HHHcCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCC
Q 018947 113 LNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (348)
Q Consensus 113 l~~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (348)
++.++. ++|.|+|+|.||..+..++.. .+..++++|+.+....
T Consensus 168 i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 168 IAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 555554 589999999999999877765 2446888888876554
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0011 Score=53.15 Aligned_cols=80 Identities=10% Similarity=0.139 Sum_probs=52.2
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhh-ccCCeE-EEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSL-LLHNFC-IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~-~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~ 118 (348)
++..|||+.|+|++.... ..+ +..++. ++++|+|..-. .. |+ .+.
T Consensus 10 ~~~LilfF~GWg~d~~~f----------~hL~~~~~~D~l~~yDYr~l~~------------d~-----~~------~~y 56 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPF----------SHLILPENYDVLICYDYRDLDF------------DF-----DL------SGY 56 (213)
T ss_pred CCeEEEEEecCCCChHHh----------hhccCCCCccEEEEecCccccc------------cc-----cc------ccC
Confidence 456899999999886542 122 234554 46788886511 10 11 135
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+++.|||+|||-.+|..+.... .++..|.++....
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~--~~~~aiAINGT~~ 91 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGI--PFKRAIAINGTPY 91 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccC--CcceeEEEECCCC
Confidence 7899999999999998876544 3666677776554
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=8.4e-05 Score=59.76 Aligned_cols=106 Identities=13% Similarity=0.121 Sum_probs=68.2
Q ss_pred eEEEeCCCCCChhhhccccccchhhhhhccCC-----eEEEEeCCCCC----CCCCCC--CC-----CCCCCCCHHHHHH
Q 018947 44 ALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-----FCIYHINPPGH----EFGAAA--IS-----DDEPVLSVDDLAD 107 (348)
Q Consensus 44 ~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g-----~~vi~~D~~G~----G~S~~~--~~-----~~~~~~~~~~~~~ 107 (348)
|.+|+||.+++..+.. .+ +.++..++ --++.+|--|. |.=+.. .| -.....+..++..
T Consensus 47 PTIfIhGsgG~asS~~-~M-----v~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~ 120 (288)
T COG4814 47 PTIFIHGSGGTASSLN-GM-----VNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSK 120 (288)
T ss_pred ceEEEecCCCChhHHH-HH-----HHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHH
Confidence 6899999999977642 12 12333222 23566676661 110100 00 0112346666777
Q ss_pred HHHHHH----HHcCCCceeEEEeChhHHHHHHHHHhCCC-----CcceEEEecCCCC
Q 018947 108 QIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCK 155 (348)
Q Consensus 108 dl~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 155 (348)
++..+| ++.+++++.+|||||||.-...|+..+.+ .+..+|.++....
T Consensus 121 wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 121 WLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 777666 45678899999999999999999987754 3889999887766
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.019 Score=51.97 Aligned_cols=125 Identities=14% Similarity=0.070 Sum_probs=71.5
Q ss_pred ceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhh----------h------hccCCeEEEEeC-CCCCCC
Q 018947 30 GSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEAC----------S------LLLHNFCIYHIN-PPGHEF 88 (348)
Q Consensus 30 ~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~----------~------~~~~g~~vi~~D-~~G~G~ 88 (348)
..+.|..+.. .+.|+|+.+-|.++.+..+....-..|... . .-.+-.+++-+| ..|.|.
T Consensus 52 ~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGf 131 (437)
T PLN02209 52 VQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGF 131 (437)
T ss_pred eEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCc
Confidence 4566655432 357899999998776644311000001000 0 112235699999 568998
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHH----c---CCCceeEEEeChhHHHHHHHHHh----C------CCCcceEEEec
Q 018947 89 GAAAISDDEPVLSVDDLADQIAEVLNH----F---GLGAVMCMGVTAGAYILTLFAMK----Y------RHRVLGLILVS 151 (348)
Q Consensus 89 S~~~~~~~~~~~~~~~~~~dl~~~l~~----l---~~~~v~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl~~ 151 (348)
|-...+. ...+-++.++++..+++. . ...+++|.|.|+||..+-.+|.. . +-.++++++.+
T Consensus 132 Sy~~~~~--~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ign 209 (437)
T PLN02209 132 SYSKTPI--ERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGN 209 (437)
T ss_pred cCCCCCC--CccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecC
Confidence 8543221 112223344666665543 2 33589999999999877766652 1 12478988888
Q ss_pred CCCCC
Q 018947 152 PLCKA 156 (348)
Q Consensus 152 ~~~~~ 156 (348)
+....
T Consensus 210 g~td~ 214 (437)
T PLN02209 210 PITHI 214 (437)
T ss_pred cccCh
Confidence 76653
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0001 Score=55.26 Aligned_cols=92 Identities=10% Similarity=0.182 Sum_probs=64.4
Q ss_pred EEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEE
Q 018947 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCM 124 (348)
Q Consensus 45 vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lv 124 (348)
||++||+-++..+....++ ...+....+ -.+.+.. .....+...++.+..++..++.+...|+
T Consensus 2 ilYlHGFnSSP~shka~l~-----~q~~~~~~~-------~i~y~~p-----~l~h~p~~a~~ele~~i~~~~~~~p~iv 64 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLL-----LQFIDEDVR-------DIEYSTP-----HLPHDPQQALKELEKAVQELGDESPLIV 64 (191)
T ss_pred eEEEecCCCCcccHHHHHH-----HHHHhcccc-------ceeeecC-----CCCCCHHHHHHHHHHHHHHcCCCCceEE
Confidence 8999999887766433331 233333333 3332321 1235788999999999999998889999
Q ss_pred EeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 125 GVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 125 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
|.|+||+.|..++.++. +++ |+++|...+
T Consensus 65 GssLGGY~At~l~~~~G--ira-v~~NPav~P 93 (191)
T COG3150 65 GSSLGGYYATWLGFLCG--IRA-VVFNPAVRP 93 (191)
T ss_pred eecchHHHHHHHHHHhC--Chh-hhcCCCcCc
Confidence 99999999999998874 444 455776664
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00078 Score=56.58 Aligned_cols=102 Identities=11% Similarity=0.088 Sum_probs=65.9
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhcc--CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH--- 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~--- 115 (348)
...++|+.||+|.+...- .+ .....++. .|..+.++.. | .+. ...-...+.+.++.+.+-+..
T Consensus 24 ~~~P~ViwHG~GD~c~~~--g~---~~~~~l~~~~~g~~~~~i~i-g--~~~----~~s~~~~~~~Qve~vce~l~~~~~ 91 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDA--TN---ANFTQLLTNLSGSPGFCLEI-G--NGV----GDSWLMPLTQQAEIACEKVKQMKE 91 (314)
T ss_pred CCCCeEEecCCCcccCCc--hH---HHHHHHHHhCCCCceEEEEE-C--CCc----cccceeCHHHHHHHHHHHHhhchh
Confidence 345799999999886542 11 11123332 3566666543 3 221 112234566666666555533
Q ss_pred cCCCceeEEEeChhHHHHHHHHHhCCC--CcceEEEecCCCC
Q 018947 116 FGLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCK 155 (348)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 155 (348)
+. +-++++|+|.||.++-.++.+.|+ .|+.+|.++....
T Consensus 92 l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 92 LS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred hh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 32 359999999999999999999987 5999999986654
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.015 Score=50.45 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=49.2
Q ss_pred EEEEeCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------cCCCceeEEEeChhHHHHHHHHHhC--------
Q 018947 77 CIYHINPP-GHEFGAAAISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKY-------- 140 (348)
Q Consensus 77 ~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~-------- 140 (348)
+|+-+|.| |.|.|-...+. ...+-++.++|+..+|+. +...+++|.|-|+||..+-.+|..-
T Consensus 3 NvLfiDqPvGvGfSy~~~~~--~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~ 80 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPI--DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICC 80 (319)
T ss_pred cEEEecCCCCCCCCCCCCCC--CccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccccc
Confidence 68899988 88888643211 111212333555555433 2347899999999999777776631
Q ss_pred --CCCcceEEEecCCCCC
Q 018947 141 --RHRVLGLILVSPLCKA 156 (348)
Q Consensus 141 --p~~v~~lvl~~~~~~~ 156 (348)
+-.++++++-++....
T Consensus 81 ~~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 81 EPPINLQGYMLGNPVTYM 98 (319)
T ss_pred CCceeeeEEEeCCCCCCc
Confidence 1147888888776543
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0057 Score=50.54 Aligned_cols=104 Identities=16% Similarity=0.208 Sum_probs=71.5
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCce
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v 121 (348)
.|.|+++-.+.+++....... .+.+-....|+.-|+-..-. .+-....+.++|+.+-+.++++.+|.+ +
T Consensus 103 dPkvLivapmsGH~aTLLR~T------V~alLp~~~vyitDW~dAr~----Vp~~~G~FdldDYIdyvie~~~~~Gp~-~ 171 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGT------VEALLPYHDVYITDWVDARM----VPLEAGHFDLDDYIDYVIEMINFLGPD-A 171 (415)
T ss_pred CCeEEEEecccccHHHHHHHH------HHHhccccceeEeeccccce----eecccCCccHHHHHHHHHHHHHHhCCC-C
Confidence 457777777777765543222 34445677888888865421 123346789999999999999999965 7
Q ss_pred eEEEeChhHH-----HHHHHHHhCCCCcceEEEecCCCCC
Q 018947 122 MCMGVTAGAY-----ILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 122 ~lvGhS~Gg~-----ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
++++.+.-+. +++.-+...|..-..+++++.+...
T Consensus 172 hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 172 HVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred cEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 8888876554 3443344567778899999887764
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0063 Score=53.04 Aligned_cols=106 Identities=14% Similarity=0.124 Sum_probs=80.0
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-- 117 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-- 117 (348)
.+.|+|+..-|.+.+...... ....++ +-+-+.+++|-+|.|.+. +.+....++++.+.|...+++.+.
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~------Ept~Ll--d~NQl~vEhRfF~~SrP~-p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRS------EPTQLL--DGNQLSVEHRFFGPSRPE-PADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred CCCCeEEEecCcccccCcccc------chhHhh--ccceEEEEEeeccCCCCC-CCCcccccHhHhhHHHHHHHHHHHhh
Confidence 567889988887665322111 112333 445678899999998765 567788999999999999987775
Q ss_pred -CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCC
Q 018947 118 -LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (348)
Q Consensus 118 -~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (348)
.++.+--|.|=||+.++.+=..||+.|++.|..-++.
T Consensus 132 Y~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 132 YPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred ccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 3678889999999999988889999999988754443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0033 Score=57.86 Aligned_cols=113 Identities=16% Similarity=0.085 Sum_probs=74.3
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS----DDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~~dl~~~l~~ 115 (348)
..+|++|..=|.-+....- .|. .....++.+|+---...-||=|+-...+- ......++.|+.+-...+++.
T Consensus 446 g~~p~lLygYGaYG~s~~p---~Fs-~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~ 521 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDP---SFS-IARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKE 521 (682)
T ss_pred CCCcEEEEEeccccccCCc---Ccc-cceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHc
Confidence 4566666655543332221 111 22246778898877777888664332211 112346788888777777643
Q ss_pred -cC-CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 116 -FG-LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 116 -l~-~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
.. .+.++++|-|.||++.-..+...|+.++++|+--|+...
T Consensus 522 g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 522 GYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred CcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 22 257999999999999999999999999999987776664
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00033 Score=49.61 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=50.9
Q ss_pred CccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 242 QCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 242 ~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
..|+|++.++.|+.+ ..+..+++.+++ ++++.+++.||-.....-.-+.+.+.+||..-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~--s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG--SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC--ceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 589999999999999 567789999998 89999999999888655566789999999754
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00041 Score=61.65 Aligned_cols=113 Identities=16% Similarity=0.103 Sum_probs=70.3
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCC-eEEEEeCCCC--CCCCCCCC----CCCCCCCCHHHHH---HHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPPG--HEFGAAAI----SDDEPVLSVDDLA---DQI 109 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g-~~vi~~D~~G--~G~S~~~~----~~~~~~~~~~~~~---~dl 109 (348)
.+.|++|+|||.+.......... + ....+.++| .-|+++++|= +|.=+.+. ........+.|++ +++
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~-y--dgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV 168 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPL-Y--DGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWV 168 (491)
T ss_pred CCCcEEEEEeccccccCCCcccc-c--ChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHH
Confidence 35699999999866543333222 1 123666777 8899999873 23111100 0001123455554 456
Q ss_pred HHHHHHcCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCC
Q 018947 110 AEVLNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (348)
Q Consensus 110 ~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (348)
.+-|+++|. ++|.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 169 ~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 169 RDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 666788876 569999999999998877663 2235778888777665
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0016 Score=59.46 Aligned_cols=111 Identities=17% Similarity=0.071 Sum_probs=73.3
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHH-
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE----PVLSVDDLADQIAEVLNH- 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~----~~~~~~~~~~dl~~~l~~- 115 (348)
.+|.+|..+|. -+.+.. ..|.....-++..|+.....|.||=|+-...+..+. ...+++|+..-...+++.
T Consensus 469 ~~P~LLygYGa--y~isl~--p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g 544 (712)
T KOG2237|consen 469 SKPLLLYGYGA--YGISLD--PSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENG 544 (712)
T ss_pred CCceEEEEecc--cceeec--cccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcC
Confidence 66766655554 333221 223333346677899999999999776544333222 234566666555555532
Q ss_pred -cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 116 -FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 116 -l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
....+..+.|.|.||.++..++.++|+.+.++|+--|...
T Consensus 545 yt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 545 YTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred CCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 2236789999999999999999999999999887655544
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00088 Score=62.47 Aligned_cols=109 Identities=15% Similarity=0.113 Sum_probs=60.4
Q ss_pred CCCeEEEeCCCCCChhhhcccc------c----cchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGL------F----FCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~------~----~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~ 110 (348)
++-+|+|++|..++........ + ............|+-+++|+-+- .|. ....++.+.++-+.
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-~tA------m~G~~l~dQtEYV~ 160 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-FTA------MHGHILLDQTEYVN 160 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-hhh------hccHhHHHHHHHHH
Confidence 4568999999888764321100 0 00000111223466777777541 011 12245666666655
Q ss_pred HHHHHc-----C--------CCceeEEEeChhHHHHHHHHHh---CCCCcceEEEecCCCCC
Q 018947 111 EVLNHF-----G--------LGAVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCKA 156 (348)
Q Consensus 111 ~~l~~l-----~--------~~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~ 156 (348)
+.++.. + ...|+++||||||.+|...+.. .++.|.-++..+++...
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 554321 1 1349999999999999866542 24456666666665554
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00095 Score=57.23 Aligned_cols=114 Identities=12% Similarity=0.061 Sum_probs=68.9
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCC--------------CCCCCCCCCC---CC-CCCCCCH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP--------------PGHEFGAAAI---SD-DEPVLSV 102 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~--------------~G~G~S~~~~---~~-~~~~~~~ 102 (348)
+-|+++++||..++...++..- ..-...-..|+.++++|- .|-+.|-... .. ....+.+
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~---g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~ 129 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLD---GLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQW 129 (316)
T ss_pred CCCEEEEeCCCCCCCCceEecc---chhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccch
Confidence 4578899999988754432111 111223345777777632 2333221110 00 0012555
Q ss_pred HHH-HHHHHHHHH-HcCC----CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 103 DDL-ADQIAEVLN-HFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 103 ~~~-~~dl~~~l~-~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
+++ .+++-+.++ ++.. +...++||||||.=|+.+|+++|+++..+...++.....
T Consensus 130 ~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 130 ETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred hHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 554 345664443 4432 268899999999999999999999999999888877654
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0017 Score=50.90 Aligned_cols=114 Identities=10% Similarity=0.094 Sum_probs=68.7
Q ss_pred CCCeEEEeCCCCCChhhhcc-ccc---------cchhhhhhccCCeEEEEeCCCC---CCCCCCCCCCCCCCCCHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQ-GLF---------FCPEACSLLLHNFCIYHINPPG---HEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~-~~~---------~~~~~~~~~~~g~~vi~~D~~G---~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
.+..+|++||.|--..+.+. .+. .-+.+....+.||.|++.+.-- +-++... + .....+..+.+.
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~n-p-~kyirt~veh~~ 177 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRN-P-QKYIRTPVEHAK 177 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccC-c-chhccchHHHHH
Confidence 45579999998764433221 110 0144556677899999887531 2222111 1 112223333333
Q ss_pred HH-HHHHHHcCCCceeEEEeChhHHHHHHHHHhCCC--CcceEEEecCCCCC
Q 018947 108 QI-AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKA 156 (348)
Q Consensus 108 dl-~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 156 (348)
-+ ..++.-...+.+.+|.||+||...+.+..++|+ +|-++.+-+++...
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 22 233344455789999999999999999999986 57777877776443
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=5.5e-05 Score=58.96 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=72.2
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCC--CCCC---CCCCC-CCCC------------CCCCCHH
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP--PGHE---FGAAA-ISDD------------EPVLSVD 103 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~--~G~G---~S~~~-~~~~------------~~~~~~~ 103 (348)
-|+|.++-|+............|. ......|+.|+++|- ||.- +++.- ...+ ...|.+-
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~q---q~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMY 120 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQ---QQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMY 120 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHH---HhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHH
Confidence 479999999999887764333331 244467999999994 5531 22110 0000 0123333
Q ss_pred HH-HHHHHHHHHH----cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 104 DL-ADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 104 ~~-~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
++ ++.+.+++.. ++..++.+.||||||.=|+..+.++|.+.+++-..+|...+
T Consensus 121 dYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 121 DYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 33 3455555542 23457899999999999999999999998888877776664
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00069 Score=58.52 Aligned_cols=109 Identities=17% Similarity=0.121 Sum_probs=70.4
Q ss_pred CeEEEeCCCCCChhhhc-cccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHH
Q 018947 43 PALVTYPDLALNYMSCF-QGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD------DEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 43 p~vvllHG~~~~~~~~~-~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~------~~~~~~~~~~~~dl~~~l~~ 115 (348)
.+|+|.-|-.++-.... ..-|.+..+. ..+--+|..++|-+|+|-+--.. .-...+.++..+|...++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap---~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAP---ELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhH---hhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 45777777766533221 1122222211 23567899999999998642111 11344566666677766665
Q ss_pred cCC------CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCC
Q 018947 116 FGL------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (348)
Q Consensus 116 l~~------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (348)
+.- .+|+.+|-|+||+++..+=.+||+-|.|....+++.
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 532 479999999999999999999999888766655443
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0024 Score=54.65 Aligned_cols=70 Identities=20% Similarity=0.201 Sum_probs=48.9
Q ss_pred cHHhhhccCC-ccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChh---hhHHHHHHHHhhc
Q 018947 233 DISEGLRKLQ-CRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPH---AMLIPMEYFLMGY 302 (348)
Q Consensus 233 ~~~~~l~~i~-~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~---~~~~~i~~fl~~~ 302 (348)
+....+..+. +|+|+++|.+|..++ ....+.+.......+...+++++|......+. +..+.+.+|+.+.
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 3444455555 799999999999983 44445554444236788888999988864443 6778888888764
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00054 Score=61.15 Aligned_cols=81 Identities=9% Similarity=0.049 Sum_probs=54.1
Q ss_pred cchhhhhhccCCeE------EEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc---CCCceeEEEeChhHHHHH
Q 018947 64 FCPEACSLLLHNFC------IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILT 134 (348)
Q Consensus 64 ~~~~~~~~~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~ 134 (348)
|...+..+.+.||. ..-+|+|-- + ...+++...+..+++.. ..++++|+||||||.++.
T Consensus 67 ~~~li~~L~~~GY~~~~~l~~~pYDWR~~-------~-----~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~ 134 (389)
T PF02450_consen 67 FAKLIENLEKLGYDRGKDLFAAPYDWRLS-------P-----AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVAR 134 (389)
T ss_pred HHHHHHHHHhcCcccCCEEEEEeechhhc-------h-----hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHH
Confidence 33445566666765 233788742 1 13344555555544322 257999999999999999
Q ss_pred HHHHhCCC------CcceEEEecCCCCC
Q 018947 135 LFAMKYRH------RVLGLILVSPLCKA 156 (348)
Q Consensus 135 ~~a~~~p~------~v~~lvl~~~~~~~ 156 (348)
.+....+. .|+++|.++++...
T Consensus 135 ~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 135 YFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 99887743 49999999987764
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0016 Score=59.12 Aligned_cols=127 Identities=11% Similarity=0.059 Sum_probs=77.6
Q ss_pred ccceeec-CCceeEEEEccC---C-CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC-
Q 018947 21 KDNLIKT-SHGSLSVTIYGD---Q-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS- 94 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~---~-~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~- 94 (348)
++.+..+ +|.+|+|.+.++ . .+|++| ||+|+-..+.. .. +.+.....+++|..-+..+.||=|+=...+.
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll--~aYGGF~vslt-P~-fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~ 470 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLL--YAYGGFNISLT-PR-FSGSRKLWLERGGVFVLANIRGGGEFGPEWHQ 470 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEE--EeccccccccC-Cc-cchhhHHHHhcCCeEEEEecccCCccCHHHHH
Confidence 4444444 677899887641 2 356655 45544332211 11 2233366788999999999999775332111
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHcCC---CceeEEEeChhHHHHHHHHHhCCCCcceEEEecC
Q 018947 95 ---DDEPVLSVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP 152 (348)
Q Consensus 95 ---~~~~~~~~~~~~~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 152 (348)
.......++|+..-..+++++ ++ +++.+.|-|-||.+.-....++|+.+.++|.--|
T Consensus 471 Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 471 AGMKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred HHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 011223455555555555433 22 5688999999999999888899999988776444
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0011 Score=50.99 Aligned_cols=52 Identities=17% Similarity=0.256 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHH----cCCCceeEEEeChhHHHHHHHHHhCCC----CcceEEEecCCCC
Q 018947 104 DLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCK 155 (348)
Q Consensus 104 ~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~ 155 (348)
.+.+.+...++. ....+++++|||+||.+|..++..... ++..++..+++..
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 344444444433 356789999999999999998887654 4566666666554
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.16 Score=45.99 Aligned_cols=135 Identities=13% Similarity=0.049 Sum_probs=78.0
Q ss_pred ccceeecC---CceeEEEEcc----CCCCCeEEEeCCCCCChhhhccccccchhhhh-----hc------cCCeEEEEeC
Q 018947 21 KDNLIKTS---HGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGLFFCPEACS-----LL------LHNFCIYHIN 82 (348)
Q Consensus 21 ~~~~v~~~---~~~l~~~~~g----~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~-----~~------~~g~~vi~~D 82 (348)
..-++.++ +..++|+... +..+|.||.+-|.++-+.......-..|.... +. .+--.++-.|
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd 124 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLD 124 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEe
Confidence 33456654 5688887653 24578999999887654322100000011001 00 1123588899
Q ss_pred CC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HH---cCCCceeEEEeChhHHHHHHHHH----hCC------CCc
Q 018947 83 PP-GHEFGAAAISDDEPVLSVDDLADQIAEVL----NH---FGLGAVMCMGVTAGAYILTLFAM----KYR------HRV 144 (348)
Q Consensus 83 ~~-G~G~S~~~~~~~~~~~~~~~~~~dl~~~l----~~---l~~~~v~lvGhS~Gg~ia~~~a~----~~p------~~v 144 (348)
.| |.|.|-...+.+ ...+-+..++|+..++ ++ +..++++|.|-|++|...-.+|. .+. -.+
T Consensus 125 ~PvGvGFSYs~~~~~-~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 125 QPVGVGFSYSNTSSD-YKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred cCCcCCccccCCCCc-CcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 87 888776442221 1245555666666555 32 23478999999999977766665 221 247
Q ss_pred ceEEEecCCCCC
Q 018947 145 LGLILVSPLCKA 156 (348)
Q Consensus 145 ~~lvl~~~~~~~ 156 (348)
+|+++-++....
T Consensus 204 kG~~IGNg~td~ 215 (454)
T KOG1282|consen 204 KGYAIGNGLTDP 215 (454)
T ss_pred eEEEecCcccCc
Confidence 888887777653
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0019 Score=60.54 Aligned_cols=113 Identities=18% Similarity=0.084 Sum_probs=63.5
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC--CCCCCCCCCCCC-CCCCHHHHHHHHH---HHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAAISDDE-PVLSVDDLADQIA---EVLN 114 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~S~~~~~~~~-~~~~~~~~~~dl~---~~l~ 114 (348)
..|++|++||.+....+.....+ .....+..++.-||++++|= +|.-........ ..+.+.|+...|. +-|.
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 201 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIA 201 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGG
T ss_pred ccceEEEeecccccCCCcccccc--cccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhh
Confidence 35999999997665432210111 11123456799999999983 221111101111 4566777665554 4455
Q ss_pred HcCC--CceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCC
Q 018947 115 HFGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (348)
Q Consensus 115 ~l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (348)
.+|. ++|.|+|||.||..+..++..- ...+.++|+.++...
T Consensus 202 ~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 202 AFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 6665 5799999999999888776642 357999999987544
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0014 Score=49.39 Aligned_cols=38 Identities=18% Similarity=0.336 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
.+.+.+.+..+++.....++++.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 34556677777777776789999999999999988874
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.019 Score=47.06 Aligned_cols=101 Identities=13% Similarity=0.153 Sum_probs=64.2
Q ss_pred CeEEEeCCCCCChhhhccccccchhhhhhc--cCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--C
Q 018947 43 PALVTYPDLALNYMSCFQGLFFCPEACSLL--LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG--L 118 (348)
Q Consensus 43 p~vvllHG~~~~~~~~~~~~~~~~~~~~~~--~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~ 118 (348)
.++|++||++....+....- ..+++ -.|..|++.|. |-|- .......+.+.++.+.+.+..-. .
T Consensus 24 ~P~ii~HGigd~c~~~~~~~-----~~q~l~~~~g~~v~~lei-g~g~------~~s~l~pl~~Qv~~~ce~v~~m~~ls 91 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMAN-----LTQLLEELPGSPVYCLEI-GDGI------KDSSLMPLWEQVDVACEKVKQMPELS 91 (296)
T ss_pred CCEEEEeccCcccccchHHH-----HHHHHHhCCCCeeEEEEe-cCCc------chhhhccHHHHHHHHHHHHhcchhcc
Confidence 46899999999876521111 12233 35888888886 4441 11123445566555555443211 1
Q ss_pred CceeEEEeChhHHHHHHHHHhCCC-CcceEEEecCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCK 155 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 155 (348)
+-++++|.|.||.++-.++...++ .|+.+|.++.+..
T Consensus 92 qGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 458999999999999999987765 4888888876553
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.00071 Score=56.30 Aligned_cols=109 Identities=14% Similarity=0.163 Sum_probs=55.4
Q ss_pred CCCeEEEeCCCCCChhhh--ccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-
Q 018947 41 DKPALVTYPDLALNYMSC--FQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG- 117 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~--~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~- 117 (348)
...|||+.||+|.+.... ...+ .......-.|-.|.+++. |-+.++.. .......+.+.++.+.+.++.-.
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i---~~~i~~~~PG~yV~si~i-g~~~~~D~--~~s~f~~v~~Qv~~vc~~l~~~p~ 77 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSI---KELIEEQHPGTYVHSIEI-GNDPSEDV--ENSFFGNVNDQVEQVCEQLANDPE 77 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHH---HHHHHHHSTT--EEE--S-SSSHHHHH--HHHHHSHHHHHHHHHHHHHHH-GG
T ss_pred CCCcEEEEEcCccccCChhHHHHH---HHHHHHhCCCceEEEEEE-CCCcchhh--hhhHHHHHHHHHHHHHHHHhhChh
Confidence 445799999999764211 1111 011223346888888877 33321100 00012345666666666665421
Q ss_pred -CCceeEEEeChhHHHHHHHHHhCCC-CcceEEEecCCCC
Q 018947 118 -LGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCK 155 (348)
Q Consensus 118 -~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 155 (348)
.+-++++|+|.||.++-.++.+.++ .|+.+|.+++...
T Consensus 78 L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 78 LANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp GTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred hhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 1459999999999999999999876 5999999986653
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.021 Score=44.59 Aligned_cols=55 Identities=20% Similarity=0.193 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHcC-----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 102 VDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
-++-+.+|..+++.|. ..++.++|||||+.++-..+...+..++.+|+++++...
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 3455667777776553 246899999999999997776667789999999876553
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0068 Score=49.47 Aligned_cols=53 Identities=9% Similarity=0.160 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC----CCCcceEEEecCCCCCC
Q 018947 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAP 157 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~ 157 (348)
..++-+..+++..+ .++.+.|||.||.+|...|... .++|.+++..+++....
T Consensus 70 ~A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 70 SALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 33444555555555 3599999999999999877763 45789999888876654
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.022 Score=49.48 Aligned_cols=64 Identities=13% Similarity=0.227 Sum_probs=48.2
Q ss_pred hhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCceeEEEeChhHHHHHHHHHhCC
Q 018947 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYR 141 (348)
Q Consensus 69 ~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (348)
..+.++|+.|+-+|-.-+=.| ..+.++.++|+..+++.+ +..++.|+|+|+|+=+.-..-.+.|
T Consensus 281 ~~l~~~gvpVvGvdsLRYfW~---------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 281 EALQKQGVPVVGVDSLRYFWS---------ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHCCCceeeeehhhhhhc---------cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 566678999999995544333 367889999999888654 5678999999999988765444444
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.01 Score=52.00 Aligned_cols=36 Identities=22% Similarity=0.232 Sum_probs=30.1
Q ss_pred ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 889999999999999999999999988775444333
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0052 Score=50.68 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=29.6
Q ss_pred HHHHcCCCceeEEEeChhHHHHHHHHHhC-----CCCcceEEEecCCCC
Q 018947 112 VLNHFGLGAVMCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCK 155 (348)
Q Consensus 112 ~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~ 155 (348)
.++.....++++.|||+||.+|..++... +..+..+.+-+|...
T Consensus 121 ~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 121 ALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 33444456899999999999999877743 334665555555443
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.021 Score=51.04 Aligned_cols=117 Identities=10% Similarity=-0.003 Sum_probs=82.0
Q ss_pred CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHH
Q 018947 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD---DEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 39 ~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~~~dl~~~l~~ 115 (348)
.+++|..|+|-|=|.-...|.... ....+....+-|-.|+..++|=+|.|.+.... .-...+..+...|+..+|++
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~-~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNE-NLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccC-cchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 467888888877655554442111 00111223344889999999999988543111 12355777888899999877
Q ss_pred cCC-------CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 116 FGL-------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 116 l~~-------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
++. .+.+.+|-|+-|.++..+=.++|+.+.+-|..+++...
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 642 28999999999999999999999999998887776653
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0076 Score=49.61 Aligned_cols=49 Identities=14% Similarity=0.226 Sum_probs=38.4
Q ss_pred HHHHHHHHH-c--CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 107 DQIAEVLNH-F--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 107 ~dl~~~l~~-l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+.+.-++++ + +.++-.++|||+||.+++.....+|+.+...++++|...
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 344444443 2 335689999999999999999999999999999988554
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0073 Score=38.11 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=22.5
Q ss_pred CCCCCccceeecCCc-eeEEEEc--cC------CCCCeEEEeCCCCCChhhhc
Q 018947 16 PPPSGKDNLIKTSHG-SLSVTIY--GD------QDKPALVTYPDLALNYMSCF 59 (348)
Q Consensus 16 ~~~~~~~~~v~~~~~-~l~~~~~--g~------~~~p~vvllHG~~~~~~~~~ 59 (348)
.-++.+++.|.|.+| -+..... ++ ..+|+|+|.||+.+++..|.
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 345678899999665 4443332 22 35789999999999998763
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.016 Score=51.17 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHcCCCc--eeEEEeChhHHHHHHHHHh
Q 018947 104 DLADQIAEVLNHFGLGA--VMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~~--v~lvGhS~Gg~ia~~~a~~ 139 (348)
++...|..+++.....+ +++.|||+||.+|+..|..
T Consensus 211 qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 211 QLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 34445555555554444 9999999999999988753
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.016 Score=51.73 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHH
Q 018947 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
.+.++.+.+.+++.+....++++.|||+||.+|..+|.
T Consensus 260 ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34455666777777666678999999999999998765
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.026 Score=46.03 Aligned_cols=98 Identities=13% Similarity=0.080 Sum_probs=54.7
Q ss_pred CeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHcCC
Q 018947 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL----NHFGL 118 (348)
Q Consensus 43 p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l----~~l~~ 118 (348)
.+|=|+.|..... .-...|+..+..+..+||.|++.-+.- |. +...-..+..+.....+ +..+.
T Consensus 18 gvihFiGGaf~ga---~P~itYr~lLe~La~~Gy~ViAtPy~~-tf--------DH~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 18 GVIHFIGGAFVGA---APQITYRYLLERLADRGYAVIATPYVV-TF--------DHQAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred EEEEEcCcceecc---CcHHHHHHHHHHHHhCCcEEEEEecCC-CC--------cHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3556665543322 333444455677888999999876632 11 01011111112222222 22222
Q ss_pred ----CceeEEEeChhHHHHHHHHHhCCCCcceEEEecC
Q 018947 119 ----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP 152 (348)
Q Consensus 119 ----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 152 (348)
-+++-+|||+|+-+-+.+...++..-++-++++-
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 2678899999999988888777655567677654
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.026 Score=50.53 Aligned_cols=37 Identities=14% Similarity=0.258 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHH
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
..++.+.+..+++.....++++.|||+||++|..+|.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 3456677788888777778999999999999998774
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.022 Score=50.38 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCC--ceeEEEeChhHHHHHHHHHh
Q 018947 103 DDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 139 (348)
+++.+++..+++..... ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 55667777777766543 68999999999999987764
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.012 Score=54.11 Aligned_cols=84 Identities=7% Similarity=-0.005 Sum_probs=51.0
Q ss_pred cchhhhhhccCCeE-----EEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----cCCCceeEEEeChhHHHHH
Q 018947 64 FCPEACSLLLHNFC-----IYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH----FGLGAVMCMGVTAGAYILT 134 (348)
Q Consensus 64 ~~~~~~~~~~~g~~-----vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~ 134 (348)
|...+..+...||. ...||+|=.. ......+++-..+..+++. -+.++++|+||||||.+++
T Consensus 158 w~kLIe~L~~iGY~~~nL~gAPYDWRls~---------~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~l 228 (642)
T PLN02517 158 WAVLIANLARIGYEEKNMYMAAYDWRLSF---------QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFL 228 (642)
T ss_pred HHHHHHHHHHcCCCCCceeecccccccCc---------cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHH
Confidence 45555667677876 3344554210 0111234444445554432 2357999999999999999
Q ss_pred HHHHhCC---------------CCcceEEEecCCCCC
Q 018947 135 LFAMKYR---------------HRVLGLILVSPLCKA 156 (348)
Q Consensus 135 ~~a~~~p---------------~~v~~lvl~~~~~~~ 156 (348)
.+..... +.|++.|.++++...
T Consensus 229 yFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 229 HFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 8876321 138888888876543
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.031 Score=44.60 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHHcCC-CceeEEEeChhHHHHHHHHHhC
Q 018947 99 VLSVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKY 140 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~ 140 (348)
.....|..+....+|++.+. ++++|+|||.|+.+..++..++
T Consensus 74 ~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34566777777888888854 5899999999999999998865
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.044 Score=49.25 Aligned_cols=112 Identities=16% Similarity=0.153 Sum_probs=66.9
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhh------------hhccCCeEEEEeC-CCCCCCCCCCCCCCCCCCCHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEAC------------SLLLHNFCIYHIN-PPGHEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~------------~~~~~g~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
+.|.|+.+.|.++.+..+....-..+.-. .-....-.++.+| .-|.|.|... ......++....+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~--~~e~~~d~~~~~~ 177 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRAL--GDEKKKDFEGAGK 177 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccc--ccccccchhccch
Confidence 57899999999887765522110000000 0011223589999 6699998752 2234455666666
Q ss_pred HHHHHHHH-------cC--CCceeEEEeChhHHHHHHHHHhCCC---CcceEEEecCCC
Q 018947 108 QIAEVLNH-------FG--LGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLC 154 (348)
Q Consensus 108 dl~~~l~~-------l~--~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 154 (348)
|+..+.+. +. ..+.+|+|-|+||.-+..+|..--+ ..++++++.+..
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 66555432 22 2589999999999988888874333 255555555443
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.029 Score=48.86 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHcCCC--ceeEEEeChhHHHHHHHHHh
Q 018947 104 DLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 139 (348)
++.+.+..+++..... ++++.|||+||.+|...|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 4456677777766543 58999999999999987763
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.75 Score=46.11 Aligned_cols=97 Identities=16% Similarity=0.177 Sum_probs=64.9
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL- 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~- 118 (348)
...|+++|+|..-+..... +.+.... ..|.+|.-- ...-...++++.+.-...-++++..
T Consensus 2121 se~~~~Ffv~pIEG~tt~l-----------~~la~rl-----e~PaYglQ~---T~~vP~dSies~A~~yirqirkvQP~ 2181 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTAL-----------ESLASRL-----EIPAYGLQC---TEAVPLDSIESLAAYYIRQIRKVQPE 2181 (2376)
T ss_pred ccCCceEEEeccccchHHH-----------HHHHhhc-----CCcchhhhc---cccCCcchHHHHHHHHHHHHHhcCCC
Confidence 4678999999876654321 2222222 235555211 1112456889988887777777764
Q ss_pred CceeEEEeChhHHHHHHHHHhCC--CCcceEEEecCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYR--HRVLGLILVSPLCK 155 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~ 155 (348)
.+..++|.|+|+.++.++|.... +....+++++..+.
T Consensus 2182 GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2182 GPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred CCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 68999999999999999987543 34666899887664
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.049 Score=42.89 Aligned_cols=76 Identities=14% Similarity=0.106 Sum_probs=44.7
Q ss_pred CeEEEEeCCCCCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh------CCCCc
Q 018947 75 NFCIYHINPPGHEFGAAAISDDEPVLSVD----DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK------YRHRV 144 (348)
Q Consensus 75 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~----~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~------~p~~v 144 (348)
...+..+++|-..... ....+.. +..+.+.+....-...+++|+|+|.|+.++..++.. ..++|
T Consensus 39 ~~~~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I 112 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRI 112 (179)
T ss_dssp EEEEEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHE
T ss_pred eeEEEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhE
Confidence 4667777777642210 0112333 333444444444455789999999999999999877 23569
Q ss_pred ceEEEecCCCCC
Q 018947 145 LGLILVSPLCKA 156 (348)
Q Consensus 145 ~~lvl~~~~~~~ 156 (348)
.++++++-+...
T Consensus 113 ~avvlfGdP~~~ 124 (179)
T PF01083_consen 113 AAVVLFGDPRRG 124 (179)
T ss_dssp EEEEEES-TTTB
T ss_pred EEEEEecCCccc
Confidence 999998866654
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.08 Score=44.46 Aligned_cols=38 Identities=11% Similarity=0.006 Sum_probs=32.7
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
..-+|+|-|+||.+++..+..+|+++..++.-++....
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 34689999999999999999999999998887776653
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.041 Score=49.75 Aligned_cols=37 Identities=14% Similarity=0.246 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHH
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
..++...+..+++.....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3456677778888777778999999999999998864
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.088 Score=45.74 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=32.2
Q ss_pred cCCCceeEEEeChhHHHHHHHHHhCCCC-----cceEEEecCCCCC
Q 018947 116 FGLGAVMCMGVTAGAYILTLFAMKYRHR-----VLGLILVSPLCKA 156 (348)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~~p~~-----v~~lvl~~~~~~~ 156 (348)
.+.+|+.|+|||+|+.+....+..-.++ |+.+++++.+...
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 4667899999999999988776644433 8999999876654
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.052 Score=48.03 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHcCCC--ceeEEEeChhHHHHHHHHH
Q 018947 104 DLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~ 138 (348)
++.+.|..+++..... +|++.|||+||.+|...|.
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3455677777766542 5899999999999998775
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.2 Score=47.24 Aligned_cols=109 Identities=22% Similarity=0.159 Sum_probs=60.3
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHH---HHH
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAE---VLN 114 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~---~l~ 114 (348)
-|++|++||.+....+....-.. .....+..++.-|+++.+| |+..... ......+.+.|+...+.. -|.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~-~~~~~~~~~~VVvVt~~YRLG~lGF~st~d--~~~~gN~gl~Dq~~AL~wv~~~I~ 188 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEII-SPAYVLLLKDVVVVTINYRLGPLGFLSTGD--SAAPGNLGLFDQLLALRWVKDNIP 188 (545)
T ss_pred CCEEEEEeCCceeeccccchhhc-CchhccccCCEEEEEecccceeceeeecCC--CCCCCcccHHHHHHHHHHHHHHHH
Confidence 69999999986543321000000 1112333446778888877 3322211 111345666666655544 445
Q ss_pred HcCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCC
Q 018947 115 HFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPL 153 (348)
Q Consensus 115 ~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 153 (348)
.+|. ++|.++|||.||..+..+... ....+.+.|..+..
T Consensus 189 ~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 189 SFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred hcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 5553 679999999999998765542 12345555555444
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.041 Score=43.02 Aligned_cols=60 Identities=10% Similarity=0.047 Sum_probs=46.9
Q ss_pred CccEEEEecCCCCCC-----chHHHHHHhhccCCcEEEEecCCCCCcccc---ChhhhHHHHHHHHhh
Q 018947 242 QCRSLIFVGESSPFH-----SEAVHMTSKIDRRYSALVEVQACGSMVTEE---QPHAMLIPMEYFLMG 301 (348)
Q Consensus 242 ~~Pvl~i~g~~D~~~-----~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e---~p~~~~~~i~~fl~~ 301 (348)
++++|-|-|+.|.++ ..+..++..++......++.+++||+..+. -.+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 356777999999998 244457777887667888899999988874 336888899999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.11 Score=45.91 Aligned_cols=36 Identities=14% Similarity=0.285 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHcC----CCceeEEEeChhHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFG----LGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
+++.+.+..+++.+. ..++++.|||+||.+|+..|.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 455566777776553 136899999999999997774
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.066 Score=47.69 Aligned_cols=56 Identities=11% Similarity=0.112 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCC--------CcceEEEecCCCC
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH--------RVLGLILVSPLCK 155 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~ 155 (348)
..+.++..-++...+.-|.+|++|++|||||.+.+.+...+++ .|++++-++++..
T Consensus 163 ~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 163 QYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhc
Confidence 3444455555554455566999999999999999999998877 2667776665443
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.065 Score=48.49 Aligned_cols=36 Identities=14% Similarity=0.295 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCCC--ceeEEEeChhHHHHHHHHHh
Q 018947 104 DLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~ 139 (348)
++.+++..+++....+ ++++.|||+||.+|...|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 4555667777666432 68999999999999977753
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.081 Score=48.09 Aligned_cols=36 Identities=14% Similarity=0.281 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcCC-----CceeEEEeChhHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFGL-----GAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~ 138 (348)
+++.+.|..+++.... .+|++.|||+||.+|...|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3445566677766542 47999999999999998775
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.086 Score=47.85 Aligned_cols=36 Identities=17% Similarity=0.297 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHcCC----CceeEEEeChhHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~ 138 (348)
+++.+++..+++.+.. .++++.|||+||.+|+..|.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 3455677777766541 36999999999999997774
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.099 Score=47.39 Aligned_cols=36 Identities=14% Similarity=0.327 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCC-----CceeEEEeChhHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFGL-----GAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~ 138 (348)
+++.+.|..+++.... .++++.|||+||.+|...|.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3455566666666542 37999999999999998775
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.11 Score=47.27 Aligned_cols=36 Identities=14% Similarity=0.297 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcC------CCceeEEEeChhHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
+++.+.|..+++..+ .-++++.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345566677776652 136999999999999997774
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.57 E-value=1.8 Score=32.88 Aligned_cols=79 Identities=8% Similarity=0.057 Sum_probs=50.5
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhh-ccCCe-EEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSL-LLHNF-CIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~-~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~ 119 (348)
...||++-|+|...... ..+ +.+++ -++++|+..... ..++.. .+
T Consensus 11 d~LIvyFaGwgtpps~v----------~HLilpeN~dl~lcYDY~dl~l----------dfDfsA-------------y~ 57 (214)
T COG2830 11 DHLIVYFAGWGTPPSAV----------NHLILPENHDLLLCYDYQDLNL----------DFDFSA-------------YR 57 (214)
T ss_pred CEEEEEEecCCCCHHHH----------hhccCCCCCcEEEEeehhhcCc----------ccchhh-------------hh
Confidence 34788898998876542 122 23444 467899886522 122221 14
Q ss_pred ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
.+.+|++|||-.+|-++.... ++++.+.++....
T Consensus 58 hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTgL 91 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGI--RLKSATAINGTGL 91 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhc--cccceeeecCCCC
Confidence 577899999999999887765 4666677765543
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.77 Score=40.00 Aligned_cols=238 Identities=13% Similarity=0.114 Sum_probs=114.5
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-- 117 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-- 117 (348)
..+|.|+++ |+.+...-+.... ..-..+.||.++-+-.|-+-..- .......+.....+-+.+++...+
T Consensus 37 s~k~Iv~~~-gWag~~~r~l~ky-----~~~Yq~~g~~~~~~tap~~~~~~---~~s~~~~sl~~~~~~l~~L~~~~~~~ 107 (350)
T KOG2521|consen 37 SEKPIVVLL-GWAGAIDRNLMKY-----SKIYQDKGYIVVRITAPCPSVFL---SASRRILSLSLASTRLSELLSDYNSD 107 (350)
T ss_pred ccccEEEEe-eeccccchhHHHH-----HHHHhcCCceEEEecCccccccc---ccccccchhhHHHHHHHHHhhhccCC
Confidence 344666666 4444332232111 13445679999988888763221 222345667777777888887666
Q ss_pred CCceeEEEeChhHHHHHHHH---H-hC-C---CCcceEEEecCCCCCCCh-HHHHHHHHHHHHHHhhccchhHHHHHHHh
Q 018947 118 LGAVMCMGVTAGAYILTLFA---M-KY-R---HRVLGLILVSPLCKAPSW-TEWLYNKVMSNLLYYYGMCGVVKELLLKR 188 (348)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a---~-~~-p---~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (348)
..++++--.|+||...+... . ++ | +.+.+++....+...... ..+...... ...... ..+...
T Consensus 108 ~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~-------~~~~~~-~~~~~~ 179 (350)
T KOG2521|consen 108 PCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSS-------PPDDYV-ARWARL 179 (350)
T ss_pred cCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceecccc-------CchhhH-HHHHhc
Confidence 45677778899998765433 1 22 2 235666666555442211 111100000 000000 000000
Q ss_pred hhcccccCCCCC-CChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHh
Q 018947 189 YFSKEVRGNAQV-PESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSK 265 (348)
Q Consensus 189 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~ 265 (348)
-+.......... .............. ......++..+ ...-.....+.+.+.+..|.++ ...+.+.+.
T Consensus 180 ~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~r~~~~~~r~------~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~ 250 (350)
T KOG2521|consen 180 NYHITLLTMAGNEGGAYLLGPLAEKIS---MSRKYHFLDRY------EEQRNELPWNQLYLYSDNDDVLPADEIEKFIAL 250 (350)
T ss_pred CeEEEEEEeeecccchhhhhhhhhccc---cccchHHHHHH------HhhhhcccccceeecCCccccccHHHHHHHHHH
Confidence 000000000000 00011111111100 00011111111 1111122456788889999988 344444333
Q ss_pred hccCC--cEEEEecCCCCCccc-cChhhhHHHHHHHHhhcc
Q 018947 266 IDRRY--SALVEVQACGSMVTE-EQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 266 ~~~~~--~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 303 (348)
....+ ++.+-+.++-|..++ .+|..+.+...+|++...
T Consensus 251 ~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 251 RREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred HHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 33322 566667789998887 699999999999999874
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.18 Score=46.56 Aligned_cols=26 Identities=12% Similarity=0.128 Sum_probs=20.5
Q ss_pred HHcCCCceeEEEeChhHHHHHHHHHh
Q 018947 114 NHFGLGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 114 ~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
+....-+++++|||+||.+|..++..
T Consensus 246 ~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 246 DEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHCCCCeEEEeccChHHHHHHHHHHH
Confidence 33444589999999999999987764
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.19 Score=44.04 Aligned_cols=36 Identities=14% Similarity=0.287 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
..+.+++..+++....-++.+-|||+||.+|...|.
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHH
Confidence 677788888888888778999999999999997775
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.96 E-value=1.7 Score=37.76 Aligned_cols=60 Identities=17% Similarity=0.112 Sum_probs=43.4
Q ss_pred ccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 239 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 239 ~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.++..|-.++.+..|.+. +.+.-+.+.+++ ...+..+|+..|..- +..+.+.+..|+.+.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~---n~~i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLI---NQFIKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhh---HHHHHHHHHHHHHHH
Confidence 567889999999888776 455567888887 356888999999765 344555666666554
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=91.88 E-value=0.61 Score=42.94 Aligned_cols=86 Identities=15% Similarity=0.205 Sum_probs=56.1
Q ss_pred hhhccCCeEEEEeCCCCCCCCCC--CCCCCCCC--------CCHHHHHHHHHHHHHHc-C--CCceeEEEeChhHHHHHH
Q 018947 69 CSLLLHNFCIYHINPPGHEFGAA--AISDDEPV--------LSVDDLADQIAEVLNHF-G--LGAVMCMGVTAGAYILTL 135 (348)
Q Consensus 69 ~~~~~~g~~vi~~D~~G~G~S~~--~~~~~~~~--------~~~~~~~~dl~~~l~~l-~--~~~v~lvGhS~Gg~ia~~ 135 (348)
...+..||.++.=|- ||..+.. ...-.... .++.+.+.--.++++.+ + .+.-+..|.|-||.-++.
T Consensus 53 ~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 53 ATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred chhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 456788999999997 6654432 10100111 11222222223344332 3 345789999999999999
Q ss_pred HHHhCCCCcceEEEecCCCC
Q 018947 136 FAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 136 ~a~~~p~~v~~lvl~~~~~~ 155 (348)
.|.+||+..++++.-+|...
T Consensus 132 ~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 132 AAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHhChhhcCeEEeCCchHH
Confidence 99999999999999888775
|
It also includes several bacterial homologues of unknown function. |
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.29 E-value=1.3 Score=37.73 Aligned_cols=112 Identities=15% Similarity=0.210 Sum_probs=69.0
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccC----------CeEEEEeCCC-CCCCCCCCCCCCCCCCCHHHHHHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH----------NFCIYHINPP-GHEFGAAAISDDEPVLSVDDLADQ 108 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~----------g~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~d 108 (348)
...|..+.+.|..+.+..-+-.+ ..+-++-.. .-.++.+|-| |.|.|--. .......+.++++.|
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNF---eE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVd-g~~~Y~~~~~qia~D 104 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNF---EELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVD-GSSAYTTNNKQIALD 104 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccch---hhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeec-CcccccccHHHHHHH
Confidence 34566777777666544333222 111111111 1346677765 88877533 222344567889999
Q ss_pred HHHHHHHc-------CCCceeEEEeChhHHHHHHHHHhCCC---------CcceEEEecCCCC
Q 018947 109 IAEVLNHF-------GLGAVMCMGVTAGAYILTLFAMKYRH---------RVLGLILVSPLCK 155 (348)
Q Consensus 109 l~~~l~~l-------~~~~v~lvGhS~Gg~ia~~~a~~~p~---------~v~~lvl~~~~~~ 155 (348)
+.++++.+ ...|++++.-|+||-++..++...-+ .+.+++|-++...
T Consensus 105 l~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 105 LVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred HHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 99999754 34689999999999999988864322 3566777665554
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.19 Score=44.03 Aligned_cols=31 Identities=19% Similarity=0.468 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHcCCCceeEEEeChhHHHHHH
Q 018947 105 LADQIAEVLNHFGLGAVMCMGVTAGAYILTL 135 (348)
Q Consensus 105 ~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~ 135 (348)
.++++.+.+....++++.++|||+||.++..
T Consensus 136 la~~~~e~~~~~si~kISfvghSLGGLvar~ 166 (405)
T KOG4372|consen 136 LAEEVKETLYDYSIEKISFVGHSLGGLVARY 166 (405)
T ss_pred cHHHHhhhhhccccceeeeeeeecCCeeeeE
Confidence 3445555555555789999999999998763
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=90.79 E-value=0.38 Score=34.44 Aligned_cols=36 Identities=3% Similarity=-0.044 Sum_probs=21.2
Q ss_pred cceeecCCceeEEEEcc--CCCCCeEEEeCCCCCChhh
Q 018947 22 DNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMS 57 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g--~~~~p~vvllHG~~~~~~~ 57 (348)
...++++|..||+...- .++..+|||+||++++-..
T Consensus 70 hf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 70 HFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGG
T ss_pred CeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHh
Confidence 34456688899887653 2456689999999998654
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.13 E-value=0.56 Score=35.91 Aligned_cols=44 Identities=23% Similarity=0.337 Sum_probs=35.3
Q ss_pred HHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 112 VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 112 ~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+++..-.....+-|.||||..|..+.-++|+...++|.++....
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 33333335567889999999999999999999999998877655
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=88.17 E-value=3.2 Score=33.98 Aligned_cols=80 Identities=14% Similarity=0.197 Sum_probs=46.4
Q ss_pred CeEEEEeCCCCC-C-CCCCCCCCCCCCCCHHHHHHHHHHHHHHc--CCCceeEEEeChhHHHHHHHHHhCCC------Cc
Q 018947 75 NFCIYHINPPGH-E-FGAAAISDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRH------RV 144 (348)
Q Consensus 75 g~~vi~~D~~G~-G-~S~~~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~------~v 144 (348)
|+.+..+++|.. + .+. ........++.+=++.+.+.++.. .-++++++|+|.|+.++...+.+.-+ ..
T Consensus 2 ~~~~~~V~YPa~f~P~~g--~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~ 79 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTG--IGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDD 79 (225)
T ss_pred CcceEEecCCchhcCcCC--CCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCc
Confidence 566677777761 1 000 001112345555566666666541 23789999999999999887765421 23
Q ss_pred ceEEEecCCCCC
Q 018947 145 LGLILVSPLCKA 156 (348)
Q Consensus 145 ~~lvl~~~~~~~ 156 (348)
-.+|+++-+...
T Consensus 80 l~fVl~gnP~rp 91 (225)
T PF08237_consen 80 LSFVLIGNPRRP 91 (225)
T ss_pred eEEEEecCCCCC
Confidence 356666655443
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.44 E-value=1.1 Score=37.27 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=24.1
Q ss_pred HHHHHHcCCCceeEEEeChhHHHHHHHHHhCC
Q 018947 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (348)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (348)
..+.+...-.++.+-|||+||.+|..+..++.
T Consensus 267 ~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 267 GAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 33444445568999999999999998877764
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=86.44 E-value=1.1 Score=37.27 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=24.1
Q ss_pred HHHHHHcCCCceeEEEeChhHHHHHHHHHhCC
Q 018947 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (348)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (348)
..+.+...-.++.+-|||+||.+|..+..++.
T Consensus 267 ~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 267 GAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 33444445568999999999999998877764
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.21 E-value=3.3 Score=37.68 Aligned_cols=44 Identities=16% Similarity=0.176 Sum_probs=33.4
Q ss_pred HHcCCCceeEEEeChhHHHHHHHHHhC-----CCCcceEEEecCCCCCC
Q 018947 114 NHFGLGAVMCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCKAP 157 (348)
Q Consensus 114 ~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~ 157 (348)
+..|.+||.|||+|+|+.+........ -+.|..+++++++....
T Consensus 442 r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 442 RSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred hccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 345778999999999999988665522 23488999998877653
|
|
| >TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit | Back alignment and domain information |
|---|
Probab=82.38 E-value=0.79 Score=39.38 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=23.7
Q ss_pred HHHHHHHcCCCceeEEEeChhHHHHHHHHH
Q 018947 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
+.++++..++++..++|||+|-+.|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 445567778889999999999988886653
|
Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.41 E-value=3.1 Score=38.66 Aligned_cols=57 Identities=16% Similarity=0.321 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHcCC---CceeEEEeChhHHHHHHHHHh-----CCC------CcceEEEecCCCCCC
Q 018947 101 SVDDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMK-----YRH------RVLGLILVSPLCKAP 157 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~~~~~ 157 (348)
++..-...+.+.+.+.++ ++++.+||||||.++=.+... .|+ .-.++++++.+....
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS 575 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGS 575 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCC
Confidence 444444455555554443 589999999999887666542 232 356777777665543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 348 | ||||
| 2xmq_A | 281 | Crystal Structure Of Human Ndrg2 Protein Provides I | 1e-32 | ||
| 2xmr_A | 281 | Crystal Structure Of Human Ndrg2 Protein Provides I | 6e-32 | ||
| 2xms_A | 281 | Crystal Structure Of Human Ndrg2 Protein Provides I | 8e-32 | ||
| 2qmq_A | 286 | Crystal Structure Of A N-Myc Downstream Regulated 2 | 8e-31 |
| >pdb|2XMQ|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight Into Its Role As A Tumor Suppressor Length = 281 | Back alignment and structure |
|
| >pdb|2XMR|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight Into Its Role As A Tumor Suppressor Length = 281 | Back alignment and structure |
|
| >pdb|2XMS|A Chain A, Crystal Structure Of Human Ndrg2 Protein Provides Insight Into Its Role As A Tumor Suppressor Length = 281 | Back alignment and structure |
|
| >pdb|2QMQ|A Chain A, Crystal Structure Of A N-Myc Downstream Regulated 2 Protein (Ndrg2, Syld, Ndr2, Ai182517, Au040374) From Mus Musculus At 1.70 A Resolution Length = 286 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 348 | |||
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 7e-82 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 2e-15 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 2e-14 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 1e-12 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 1e-11 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 1e-11 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 1e-11 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 4e-10 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 5e-09 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 6e-09 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 7e-09 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 9e-09 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 1e-08 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 2e-08 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 4e-08 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 5e-08 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 6e-08 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 1e-07 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 1e-07 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 2e-07 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 4e-07 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 5e-07 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 5e-07 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 6e-07 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 8e-07 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 9e-07 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 1e-06 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 2e-06 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 3e-06 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 3e-06 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 4e-06 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 4e-06 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 9e-06 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 1e-05 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 2e-05 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 3e-05 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 5e-05 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 1e-04 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 4e-04 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 6e-04 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 7e-04 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 8e-04 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 8e-04 |
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 249 bits (637), Expect = 7e-82
Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 18/290 (6%)
Query: 18 PSGKDNLIKTSHGSLSVTIYG--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN 75
+ ++T +GS++ T+YG +PA+ TY D+ LNY SCFQ LF + ++ N
Sbjct: 9 HHHHTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII-QN 67
Query: 76 FCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTL 135
F H++ PG E GA S+D LAD I +L + ++ +GV AGAYIL+
Sbjct: 68 FVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSR 127
Query: 136 FAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195
+A+ + V GL+L++ A W +W +K G+ + +++L FS+E
Sbjct: 128 YALNHPDTVEGLVLINIDPNAKGWMDWAAHK-------LTGLTSSIPDMILGHLFSQEEL 180
Query: 196 GNAQVPESDIVQACRRLLDERQSS-NVWHFLEAINGRPDIS---EGLRKLQCRSLIFVGE 251
S+++Q R ++ + N+ + + N R D++ G L+C ++ VG+
Sbjct: 181 SG----NSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGD 236
Query: 252 SSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301
+P V SK+D ++ +++ G QP + +YFL G
Sbjct: 237 QAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQG 286
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 2e-15
Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 23/217 (10%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
PGH G S DE + D + + +L+ + ++ G + G + +A+
Sbjct: 51 PGH--GEDQSSMDET-WNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIP 107
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVM----SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQ 199
+ LIL S L +++ + +L G+ V + F ++ +
Sbjct: 108 ISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVE 167
Query: 200 VPESDIVQACRRLLDERQSSNVWHFLEAING-----RPDISEGLRKLQCRSLIFVGES-S 253
+ ++ +R S + +A+ P++ L++++ +LI GE
Sbjct: 168 I--------QHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDE 219
Query: 254 PFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
F A M + I S + A G + E
Sbjct: 220 KFVQIAKKMANLIPN--SKCKLISATGHTIHVEDSDE 254
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-14
Identities = 39/211 (18%), Positives = 68/211 (32%), Gaps = 16/211 (7%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G G + E S+ +A ++ + L G+ +G GA + A+ Y
Sbjct: 50 RGT--GNNPDTLAEDY-SIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPAS 106
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203
V LI V+ + + T + V LLY G V E + + A
Sbjct: 107 VTVLISVNGWLRINAHTRRCFQ-VRERLLYSGGAQAWV-EAQPLFLYPADWM--AARAPR 162
Query: 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHSEA 259
+ L + +N+ L A+ R D S +++C I S
Sbjct: 163 LEAEDALALAHFQGKNNLLRRLNAL-KRADFSHHADRIRCPVQIICASDDLLVPTACSSE 221
Query: 260 VHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
+H + + S + + G P
Sbjct: 222 LH--AALPD--SQKMVMPYGGHACNVTDPET 248
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 1e-12
Identities = 45/301 (14%), Positives = 88/301 (29%), Gaps = 66/301 (21%)
Query: 13 METPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL 72
+ P K I T G V G +D P LV L
Sbjct: 38 LSLWPVRCKSFYISTRFGQTHVIASGPEDAPPLV-------------------------L 72
Query: 73 LH------------------NFCIYHINPPGHEFGAAAISD--DEPVLSVDDLADQIAEV 112
LH + Y ++ G + + D A+ + +V
Sbjct: 73 LHGALFSSTMWYPNIADWSSKYRTYAVDIIGD--KN---KSIPENVSGTRTDYANWLLDV 127
Query: 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172
++ G+ +G++ G F ++ RV ++SP + Y +
Sbjct: 128 FDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYAL---- 183
Query: 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRP 232
G+ ++ F + + V V+ + + + S +
Sbjct: 184 ------GLTASNGVET-FLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYV 236
Query: 233 DISEGLRKLQCRSLIFVGESSPFH---SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH 289
E LR + L+ +GE + S +S + ++ G +++ EQP
Sbjct: 237 FTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPD--IEAEVIKNAGHVLSMEQPT 294
Query: 290 A 290
Sbjct: 295 Y 295
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 1e-11
Identities = 46/271 (16%), Positives = 100/271 (36%), Gaps = 29/271 (10%)
Query: 25 IKTSHG-SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP 83
+ TS G SL+ + G +KP L + + + L +F + +
Sbjct: 9 LATSDGASLAYRLDGAAEKPLLALSNSIGTT-LHMWDAQL------PALTRHFRVLRYDA 61
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
GH GA+++ ++ L + + E+L+ + +G++ G + A+ R
Sbjct: 62 RGH--GASSVPPGPY--TLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQR 117
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203
+ L+L + +W ++ ++ +L M L +F +
Sbjct: 118 IERLVLANTSAWLGPAAQW--DERIAAVLQAEDMSETA-AGFLGNWFPPALLER----AE 170
Query: 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHSEA 259
+V+ R +L + A+ D+ L +++ +L+ G ++ H E
Sbjct: 171 PVVERFRAMLMATNRHGLAGSFAAV-RDTDLRAQLARIERPTLVIAGAYDTVTAASHGEL 229
Query: 260 VHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
+ + I + LV + A + E P A
Sbjct: 230 --IAASIAG--ARLVTLPA-VHLSNVEFPQA 255
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 1e-11
Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 26/213 (12%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
GH G + +++ L + +++ + G++ G A ++ R
Sbjct: 61 RGH--GHSEAPKGP--YTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADR 116
Query: 144 VLGLILVSPLCKAPSWTEWL--YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201
+ + L + + S W+ K + GM + + +L R+F+ +
Sbjct: 117 IERVALCNTAARIGSPEVWVPRAVKARTE-----GMHALA-DAVLPRWFTADYMER---- 166
Query: 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHS 257
E ++ R + EAI D+ ++ +L+ G ++P
Sbjct: 167 EPVVLAMIRDVFVHTDKEGYASNCEAI-DAADLRPEAPGIKVPALVISGTHDLAATPAQG 225
Query: 258 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
+ I + VE+ A + E+ A
Sbjct: 226 RE--LAQAIAG--ARYVELDA-SHISNIERADA 253
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 1e-11
Identities = 30/240 (12%), Positives = 71/240 (29%), Gaps = 44/240 (18%)
Query: 72 LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG-----AVMC--- 123
L ++ ++ GH G S + +V D +A + + + +
Sbjct: 38 YLEDYNCILLDLKGH--GE---SKGQCPSTVYGYIDNVANFITNSEVTKHQKNITLIGYS 92
Query: 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183
MG I+ A+K V ++ +S + + K+ N
Sbjct: 93 MG----GAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHN------------- 135
Query: 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWH-FLEAINGRPDISEGLRKLQ 242
L + E G P S+ + + ++ L A D+ + L+ +
Sbjct: 136 -QLDNNYLLECIGGIDNPLSE-----KYFETLEKDPDIMINDLIACK-LIDLVDNLKNID 188
Query: 243 CRSLIFVGE---SSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 299
V + + + + ++ S L + + + ++ F+
Sbjct: 189 IPVKAIVAKDELLTLV-EYSEIIKKEV--ENSELKIFETGKHFLLVVNAKGVAEEIKNFI 245
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 4e-10
Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 24/215 (11%)
Query: 84 PGHEFGAAAISD-DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
PG G SD P S + L I + G + G + G Y+ A +
Sbjct: 58 PGM--GN---SDPISPSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKD 112
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPE 202
+ LG+ L P+ ++ L K ++ L + + + + +
Sbjct: 113 QTLGVFLTCPVI-TADHSKRLTGKHINILEEDIN-------PVENKEYFADFLSMNVIIN 164
Query: 203 SDIVQACRRLLDERQSSNVWHFLEAINGRPDIS----EGLRKLQCRSLIFVGE---SSPF 255
+ + L+ F++ + + Q I VG +
Sbjct: 165 NQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGY 224
Query: 256 HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
E + + + + +V + G + +Q A
Sbjct: 225 -QEQLKLINHNEN--GEIVLLNRTGHNLMIDQREA 256
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 5e-09
Identities = 33/225 (14%), Positives = 66/225 (29%), Gaps = 32/225 (14%)
Query: 71 LLLHNFCIYHINPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAG 129
L F + +P G+ G D P + A +++ V +G + G
Sbjct: 47 LNKKLFTVVAWDPRGY--GHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDG 104
Query: 130 AYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189
+ A KY + +++ +Y + + ++ L Y
Sbjct: 105 GITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDY 164
Query: 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 249
F++ D ++ + L D L ++QC +LI
Sbjct: 165 FARTCEKWV-----DGIRQFKHLPD----------------GNICRHLLPRVQCPALIVH 203
Query: 250 GESSPF----HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
GE P H++ +H + S L + +
Sbjct: 204 GEKDPLVPRFHADFIH--KHVKG--SRLHLMPEGKHNLHLRFADE 244
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 6e-09
Identities = 40/217 (18%), Positives = 66/217 (30%), Gaps = 23/217 (10%)
Query: 84 PGHEFGA--AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141
G G D ++D A + +V L + +G + GA I L +++
Sbjct: 55 VGS--GHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRP 112
Query: 142 HRVLGLILVSP----LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197
L++V P L P + + + LL M F+ V
Sbjct: 113 ELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLL--EMMEKNYIGWA--TVFAATVLNQ 168
Query: 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES----S 253
PE I + F +A D E L K+ SLI
Sbjct: 169 PDRPE--IKEELESRFCSTDPVIARQFAKAA-FFSDHREDLSKVTVPSLILQCADDIIAP 225
Query: 254 PFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
+ +H + S+L +++A G P
Sbjct: 226 ATVGKYMH--QHLPY--SSLKQMEARGHCPHMSHPDE 258
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 7e-09
Identities = 37/201 (18%), Positives = 62/201 (30%), Gaps = 6/201 (2%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
+D AD IA ++ G + +G + GA A KY V ++ + +
Sbjct: 116 EANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEA 175
Query: 161 EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSN 220
++ + V+ L RY + ES L S+
Sbjct: 176 LDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAA 235
Query: 221 VWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF--HSEAVHMTSKIDRRYSALVEVQA 278
+ + R D+ R + LI GESS + + +V V
Sbjct: 236 MAQTARGL--RSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPD--LPVVVVPG 291
Query: 279 CGSMVTEEQPHAMLIPMEYFL 299
V E P L + F+
Sbjct: 292 ADHYVNEVSPEITLKAITNFI 312
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 9e-09
Identities = 36/276 (13%), Positives = 78/276 (28%), Gaps = 27/276 (9%)
Query: 25 IKTSHGSLSVTIYGDQDKPALVT---YPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI 81
+ L V G + PAL P + L F + +
Sbjct: 8 VPVGEAELYVEDVGPVEGPALFVLHGGPGGNAYV---LREGLQ------DYLEGFRVVYF 58
Query: 82 NPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140
+ G G + D + +VD L + + G+ + GA + ++
Sbjct: 59 DQRGS--GRSLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRF 116
Query: 141 RHRVLGLILVSPLCKAPSWTEWLYNKVMSNL-LYYYGMCGVVKELLLKRYFSKEVRGNAQ 199
++L + ++ L + +K K F + + +
Sbjct: 117 PQAEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPR 176
Query: 200 VPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPF 255
+ A + + + + R D + L + + VGE S P+
Sbjct: 177 GRMAYEWLAEGAGILGSDAPGLAFLRNGL-WRLDYTPYLTPERRPLYVLVGERDGTSYPY 235
Query: 256 HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAM 291
E ++ + + + G + + P A
Sbjct: 236 AEEVAS---RLR---APIRVLPEAGHYLWIDAPEAF 265
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-08
Identities = 37/218 (16%), Positives = 71/218 (32%), Gaps = 30/218 (13%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G FG ++ S D D I +++ + +G G + A++Y R
Sbjct: 63 VG--FGFTDRPENYN-YSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSER 119
Query: 144 VLGLILVSPLCKAPSWTEWL---------YNKVMSNLLYYYGMCGVVKELLLKRYFSKEV 194
V ++L+ TE L + + L + +V + L + + +
Sbjct: 120 VDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASI 179
Query: 195 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254
+ Q ++ + E + I+ E ++ L +LI G
Sbjct: 180 QPGFQ-------ESFSSMFPEPRQ-------RWIDALASSDEDIKTLPNETLIIHGREDQ 225
Query: 255 F--HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
S ++ + IDR + L CG EQ
Sbjct: 226 VVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDR 261
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 2e-08
Identities = 31/227 (13%), Positives = 75/227 (33%), Gaps = 19/227 (8%)
Query: 72 LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAY 131
L + I I+ P G + +S+ V + D + I + HF + + + G +
Sbjct: 66 LPDSIGILTIDAPNS--GYSPVSNQANV-GLRDWVNAILMIFEHFKFQSYLLCVHSIGGF 122
Query: 132 ILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL-----LL 186
+ LG I + P + + L + L L
Sbjct: 123 AALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLS 182
Query: 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246
+ +FS + C+R L++ Q ++ F + + + + S+
Sbjct: 183 RSHFSSQQFKQL----WRGYDYCQRQLNDVQ--SLPDFKIRLALGEEDFKTGISEKIPSI 236
Query: 247 IFVGESSPFHSEAVHMTSKIDRRYS-ALVEVQACGSMVTEEQPHAML 292
+F E ++ S+ +++ + + + + +++L
Sbjct: 237 VFSES----FREKEYLESEYLNKHTQTKLILCGQHHYLHWSETNSIL 279
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 4e-08
Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 8/222 (3%)
Query: 84 PGH-EFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142
G + + V +QI ++NHFG+ +G + G + ++
Sbjct: 67 IGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPE 126
Query: 143 RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE-VRGNAQVP 201
R + L+ + + ++++ Y +EL+ + E G ++
Sbjct: 127 RFDKVALMGSVGAPMNARPPELARLLA--FYADPRLTPYRELIHSFVYDPENFPGMEEIV 184
Query: 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF--HSEA 259
+S A + Q + L +L L+F G +
Sbjct: 185 KSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTS 244
Query: 260 VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301
+++T + + LV + CG E+ AM +
Sbjct: 245 LYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 5e-08
Identities = 38/287 (13%), Positives = 76/287 (26%), Gaps = 38/287 (13%)
Query: 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFG 89
L +GD PAL+ L L + E L + + G
Sbjct: 12 ELWSDDFGDPADPALL------LVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDT--G 63
Query: 90 A-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLI 148
+LA VL+ +G+ +G++ GA I + A+ + R+ L
Sbjct: 64 RSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLT 123
Query: 149 LVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDI--- 205
++ + + + L ++ G A +
Sbjct: 124 MLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKW 183
Query: 206 -----------VQACRRLLDE------RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248
R + + + P + LR++ +L+
Sbjct: 184 RILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVI 243
Query: 249 VGESSPF----HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAM 291
E P H + + I + L E+ G + +
Sbjct: 244 QAEHDPIAPAPHGKHLA--GLI--PTARLAEIPGMGHALPSSVHGPL 286
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 6e-08
Identities = 28/215 (13%), Positives = 70/215 (32%), Gaps = 23/215 (10%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G GA +++ + + A ++ + +GV+ GA+I +
Sbjct: 80 RGI--GA---TENAEGFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPEL 134
Query: 144 VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM----CGVVKELLLKRYFSKEVRGNAQ 199
V +L++ + ++ LY G+ + LL+ + K + +
Sbjct: 135 VSSAVLMATRGRLDRARQF--FNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVA 192
Query: 200 VPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPF 255
V + A + + + + L+ + + R + L+ + P+
Sbjct: 193 VGD---WIAMFSMWPIKSTPGLRCQLDCA-PQTNRLPAYRNIAAPVLVIGFADDVVTPPY 248
Query: 256 HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
V + +++ G + E+P A
Sbjct: 249 LGREVA--DAL--PNGRYLQIPDAGHLGFFERPEA 279
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 9/163 (5%)
Query: 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153
S D P +V+ + +A +++ G A + G+++GA + L A + P
Sbjct: 63 SGDTPPYAVEREIEDLAAIIDAAGGAAFVF-GMSSGAGLSLLAAASGLPITRLAVFEPPY 121
Query: 154 CKAPSWTEWL--YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRR 211
S Y + LL G + + YF E G + + QA
Sbjct: 122 AVDDSRPPVPPDYQTRLDALL----AEGRRGDAV--TYFMTEGVGVPPDLVAQMQQAPMW 175
Query: 212 LLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254
E + + + + + + +L+ G +SP
Sbjct: 176 PGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASP 218
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 1e-07
Identities = 32/203 (15%), Positives = 66/203 (32%), Gaps = 27/203 (13%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
D AD IA+++ H L + MG G + A RV GL+L+
Sbjct: 68 DYDTFADDIAQLIEHLDLKEVTLVGFSMG---GGDVARYIARHGSARVAGLVLLGAVTPL 124
Query: 153 LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL--LLKRYFSKEVRGNAQVPESDIVQACR 210
+ P + + + V + ++K+ + + + N S VQ
Sbjct: 125 FGQKPDYPQGVPLDVFARFKT-----ELLKDRAQFISDFNAPFYGINKGQVVSQGVQT-- 177
Query: 211 RLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSK 265
+ L +++ ++ + D + K+ +L+ G+ PF +
Sbjct: 178 QTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAEL 237
Query: 266 IDRRYSALVEVQACGSMVTEEQP 288
I + + L +
Sbjct: 238 I--KGAELKVYKDAPHGFAVTHA 258
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 25/203 (12%), Positives = 59/203 (29%), Gaps = 24/203 (11%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
D AD + ++L L + MG G + R+ +L+S
Sbjct: 68 DFDTFADDLNDLLTDLDLRDVTLVAHSMG---GGELARYVGRHGTGRLRSAVLLSAIPPV 124
Query: 153 LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRL 212
+ K+ + + ++V L G+ + + ++ +
Sbjct: 125 MIKSDKNPDGVPDEVFDALK--NGVLTERSQFW--KDTAEGFFSANRPGNKVTQGNKDAF 180
Query: 213 LDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSKID 267
+ + + ++ G D +E L+K +L+ G+ P + I
Sbjct: 181 WYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIP 240
Query: 268 RRYSALVEVQACG--SMVTEEQP 288
+ L + +
Sbjct: 241 N--AELKVYEGSSHGIAMVPGDK 261
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 4e-07
Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 18/212 (8%)
Query: 84 PGHEFGAAAISD--DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR 141
PG +G SD D A + V++ + + +G + G + F +K+
Sbjct: 75 PG--WGK---SDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWP 129
Query: 142 HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201
RV L+L+ S + + + L Y + LK V + +
Sbjct: 130 ERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIEN---LKLMMDIFVFDTSDLT 186
Query: 202 ESDIVQACRRLLDER--QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES---SPFH 256
++ +L R + V PD L +++ ++LI G + P
Sbjct: 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPM- 245
Query: 257 SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP 288
+ + S I S L + CG E
Sbjct: 246 DAGLRLLSGIAG--SELHIFRDCGHWAQWEHA 275
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 5e-07
Identities = 30/195 (15%), Positives = 69/195 (35%), Gaps = 11/195 (5%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
A + +++ + +G G FA++Y R+ LIL+ P PS
Sbjct: 86 RGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMF 145
Query: 161 EWLYNKVMSNLLYYYGMCGV--VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS 218
+ + + L Y +K++L + + + + +A +R + ++
Sbjct: 146 APMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQG--RWEAIQRQPEHLKN 203
Query: 219 SNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE---SSPFHSEAVHMTSKIDRRYSALVE 275
+ ++ D++ L +++ ++ I G P + + ID + L
Sbjct: 204 FLISAQKAPLS-TWDVTARLGEIKAKTFITWGRDDRFVPL-DHGLKLLWNIDD--ARLHV 259
Query: 276 VQACGSMVTEEQPHA 290
CG+ E
Sbjct: 260 FSKCGAWAQWEHADE 274
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 34/201 (16%), Positives = 66/201 (32%), Gaps = 21/201 (10%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
+D AD +A+++ H L AV+ G G + RV L+S
Sbjct: 68 DMDTYADDLAQLIEHLDLRDAVLFGFSTG---GGEVARYIGRHGTARVAKAGLISAVPPL 124
Query: 153 LCKAPSWTEWLYNKVMSNLLY--YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACR 210
+ K + L +V + + K+L +F G +V
Sbjct: 125 MLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAG--MVDWFW 182
Query: 211 RLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSKID 267
N + ++A D +E L+K+ +L+ G++ P + + + +
Sbjct: 183 LQGMAAGHKNAYDCIKAF-SETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVK 241
Query: 268 RRYSALVEVQACGSMVTEEQP 288
S L +T+
Sbjct: 242 G--STLKIYSGAPHGLTDTHK 260
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 6e-07
Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 19/198 (9%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP----LCKA 156
S++ A + E+L L V +G + + I + + R+ + ++ P +
Sbjct: 80 SLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFP 139
Query: 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER 216
P + + L+ M Y + V G + E ++
Sbjct: 140 PDYVGGFERDDLEELI--NLMDKNYIGWA--NYLAPLVMGASHSSE--LIGELSGSFCTT 193
Query: 217 QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES----SPFHSEAVHMTSKIDRRYSA 272
F +A D L + +LIF SP + + I S
Sbjct: 194 DPIVAKTFAKAT-FFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMA--ENI--PNSQ 248
Query: 273 LVEVQACGSMVTEEQPHA 290
L +QA G +
Sbjct: 249 LELIQAEGHCLHMTDAGL 266
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 8e-07
Identities = 12/88 (13%), Positives = 28/88 (31%)
Query: 88 FGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGL 147
G + + + +A V++ LG + + + F ++ G
Sbjct: 72 LGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGF 131
Query: 148 ILVSPLCKAPSWTEWLYNKVMSNLLYYY 175
+ V+P+C + L+ Y
Sbjct: 132 VPVAPICTDKINAANYASVKTPALIVYG 159
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 9e-07
Identities = 26/201 (12%), Positives = 58/201 (28%), Gaps = 17/201 (8%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159
D + ++L L + G + + R+ ++ +
Sbjct: 76 EYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYK 135
Query: 160 TEWLYNKVMSNLLYYYGMCGVVKEL------LLKRYFSKEVRGNAQVPESDIVQACRRLL 213
+E + + GV+ + K +F+ R + V ES
Sbjct: 136 SEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDL-VSESFR----LYNW 190
Query: 214 DERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR 269
D ++ L+ I + D + L K +LI G+S + +T +
Sbjct: 191 DIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPN 250
Query: 270 YSALVEVQACGSMVTEEQPHA 290
S + ++ +
Sbjct: 251 -SKVALIKGGPHGLNATHAKE 270
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 1e-06
Identities = 27/203 (13%), Positives = 55/203 (27%), Gaps = 19/203 (9%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSP----LCK 155
D A + VL L V+ + A RV L ++ L +
Sbjct: 72 DYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQ 131
Query: 156 APSWTEWLYNKVMSNLL--YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLL 213
E + +V + + K +++ + +++ E V +
Sbjct: 132 RDDNPEGVPQEVFDGIEAAAKGDRFAWFTD-FYKNFYNLDENLGSRISE-QAVTGSWNVA 189
Query: 214 DERQSSNVWHFLEAINGRPDISEGLRKLQCRS---LIFVGESS---PFHSEAVHMTSKID 267
S+ V + D + ++ LI G P + A +
Sbjct: 190 --IGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP 247
Query: 268 RRYSALVEVQACGSMVTEEQPHA 290
+ VEV+ +
Sbjct: 248 E--ADYVEVEGAPHGLLWTHADE 268
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 2e-06
Identities = 28/199 (14%), Positives = 54/199 (27%), Gaps = 17/199 (8%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156
D A + VL L AV+ MG + + R+ + ++ L
Sbjct: 73 DYDTFAADLNTVLETLDLQDAVLVGFSMG---TGEVARYVSSYGTARIAAVAFLASLEPF 129
Query: 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY--FSKEVRGNAQVPESDIVQACRR--L 212
T+ + ++ G+ VK Y F + + + I + R
Sbjct: 130 LLKTDDNPDGAAP-QEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSW 188
Query: 213 LDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSKIDRR 269
D + ++ +LI G P + A +
Sbjct: 189 NTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS- 247
Query: 270 YSALVEVQACGSMVTEEQP 288
+ VEV+ +
Sbjct: 248 -AEYVEVEGAPHGLLWTHA 265
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 29/199 (14%), Positives = 60/199 (30%), Gaps = 17/199 (8%)
Query: 101 SVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159
+D A +A + L GAV T G + A RV +LVS +
Sbjct: 70 DMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVK 129
Query: 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRY-------FSKEVRGNAQVPESDIVQACRRL 212
++ + + + + + Y F R A V + ++
Sbjct: 130 SDTNPDGLPLEVF--DEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQ-GLIDHWWLQ 186
Query: 213 LDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSKIDRR 269
++ + + A D ++ L+++ L+ G P+ A +
Sbjct: 187 GMMGAANAHYECIAAF-SETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLAN- 244
Query: 270 YSALVEVQACGSMVTEEQP 288
+ L + + P
Sbjct: 245 -ATLKSYEGLPHGMLSTHP 262
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 3e-06
Identities = 46/369 (12%), Positives = 89/369 (24%), Gaps = 136/369 (36%)
Query: 34 VTIYGDQD--KPALV--TYPDLALNYMSCFQ------GLFFCPEACSLLLHNFCIYHINP 83
V I G K + + F+ PE +L Y I+P
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL-YQIDP 211
Query: 84 PGHEFGAAAISDDEPV--------------------LSVDDLADQIAEVLNHFGLGAVMC 123
+ + + L + ++ + A+ N F L C
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN--AKAWNAFNLS---C 266
Query: 124 --------MGVTAG--------------------AYILTLFAMKYRHRVLGL----ILVS 151
VT + +L R L + +
Sbjct: 267 KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326
Query: 152 PLCKA---------PS-WTEWLY------NKVMS---NLLY------YYGMCGV------ 180
P + + W W + ++ N+L + V
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK 240
+ +LL + ++ + + + L E+Q + P I L K
Sbjct: 387 IPTILLSLIWFDVIK---SDVMVVVNKLHKYSLVEKQPKESTISI------PSIYLEL-K 436
Query: 241 LQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPME--YF 298
++ + A+H I Y+ ++ P YF
Sbjct: 437 VKLENEY-----------ALH--RSIVDHYNIPKTF----------DSDDLIPPYLDQYF 473
Query: 299 L--MGYGLY 305
+G+ L
Sbjct: 474 YSHIGHHLK 482
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 2e-05
Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 42/215 (19%)
Query: 160 TEWLYN-KVMSNLLYYYGMCGVVKELL---------LKRYFSKEVR----GNAQVPES-- 203
+ L + N+L G+ G K + ++ ++ N PE+
Sbjct: 141 RQALLELRPAKNVLID-GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199
Query: 204 DIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-----RSLIFVGE-SSPFHS 257
+++Q +D +S H I LR+L L+ + +
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW 259
Query: 258 EAVHMTSKI--DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY------GLYRPTL 309
A +++ KI R+ + + + H I +++ M L L
Sbjct: 260 NAFNLSCKILLTTRFKQVTDF-----LSAATTTH---ISLDHHSMTLTPDEVKSLLLKYL 311
Query: 310 SVSPRS-PLSPCCISPELLSPESMGLKLKPIKTRI 343
P+ P +P LS + ++
Sbjct: 312 DCRPQDLPREVLTTNPRRLS--IIAESIRDGLATW 344
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 3e-06
Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 40/288 (13%)
Query: 25 IKTSHGSLSVTIYGDQDKPALVT---YPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI 81
++ + + +G + P ++ + +Q + A L + +
Sbjct: 9 LEFGGNQICLCSWGSPEHPVVLCIHGILEQG----LAWQEV-----ALPLAAQGYRVVAP 59
Query: 82 NPPGHEFGA-AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY 140
+ GH G + + S QI V+ ++ +G + GA + T A
Sbjct: 60 DLFGH--GRSSHLEMVTS-YSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVR 116
Query: 141 RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE------V 194
++ LILV A + ++ L Y +
Sbjct: 117 PKKIKELILVELPLPAEESKKESAVNQLTTCLDYL-----SSTPQHPIFPDVATAASRLR 171
Query: 195 RGNAQVPESDIVQACRRLLDERQSSNVWHF------------LEAINGRPDISEGLRKLQ 242
+ + E +R+ Q W + GR E L+ +Q
Sbjct: 172 QAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQ 231
Query: 243 CRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
+ + G+SS + K+ + V + + G + + A
Sbjct: 232 VPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFL-SGGHNLHIDAAAA 278
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 31/218 (14%), Positives = 64/218 (29%), Gaps = 32/218 (14%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMC---MGVTAGAYILTLFAMKY 140
PG G S LS+ D+A+ + + A+ +G + + A+ +
Sbjct: 48 PGF--GR---SRGFGALSLADMAEAVLQQAPD---KAIWLGWSLG----GLVASQIALTH 95
Query: 141 RHRVLGLILV--SPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 198
RV L+ V SP A + V++ ++ ++R+ + + G
Sbjct: 96 PERVRALVTVASSPCFSARDEWPGIKPDVLAGFQ---QQLSDDQQRTVERFLALQTMGTE 152
Query: 199 QVPESDIVQACRRLLDERQSSN--VWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF- 255
+ D + +L + LE + D+ + L+ + L G
Sbjct: 153 TARQ-DARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLV 210
Query: 256 ---HSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290
+ +S P
Sbjct: 211 PRKVVPMLD--KLW--PHSESYIFAKAAHAPFISHPAE 244
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 4e-06
Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 21/203 (10%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156
+D AD +A V+ H G+ AV G G ++ A +V +L++ +
Sbjct: 71 DMDHYADDVAAVVAHLGIQGAVHVGHSTG---GGEVVRYMARHPEDKVAKAVLIAAVPPL 127
Query: 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY-------FSKEVRGNAQVPESDIVQAC 209
T + + G V + Y F R + E I+
Sbjct: 128 MVQTPGNPGGLPK--SVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASE-GIIGNW 184
Query: 210 RRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKID 267
R + + + A + D +E L+ +Q L+ G+ + +++K+
Sbjct: 185 WRQGMIGSAKAHYDGIVAF-SQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLL 243
Query: 268 RRYSALVEVQACGSMVTEEQPHA 290
AL + +
Sbjct: 244 PN-GALKTYKGYPHGMPTTHADV 265
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 4e-06
Identities = 26/240 (10%), Positives = 78/240 (32%), Gaps = 25/240 (10%)
Query: 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILT 134
++ +Y +N G G + + ++ S+ + + + + G +AG +
Sbjct: 49 HYSVYLVNLKGC--GNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLAL 106
Query: 135 LFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV-----------MSNLLYYYGMCGVVKE 183
++A + + + +I+ + + N L ++
Sbjct: 107 VYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERK 166
Query: 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRP-DISEGLRKLQ 242
L + + E + +A + + N ++ + + D+ + L+ ++
Sbjct: 167 ALSREWALMSF-----YSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVK 221
Query: 243 CRSLIFVGE---SSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 299
S I+ G+ P+ + + + I + L + + E+ + L
Sbjct: 222 IPSFIYCGKHDVQCPYIF-SCEIANLIPN--ATLTKFEESNHNPFVEEIDKFNQFVNDTL 278
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 9e-06
Identities = 23/170 (13%), Positives = 52/170 (30%), Gaps = 26/170 (15%)
Query: 10 SIDMETPPPSGKDNLIKTSHGSLSV-------TIYGDQ----DKPALVT---YPDLALNY 55
+++ T P + + S ++ + + L+ P +A NY
Sbjct: 11 TLEANTNGPGSMLSRMPVSSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNY 70
Query: 56 MSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV--LSVDDLADQIAEVL 113
++ L + H + G G + D P + D+ V
Sbjct: 71 VANIAALA--------DETGRTVIHYDQVGC--GNSTHLPDAPADFWTPQLFVDEFHAVC 120
Query: 114 NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163
G+ +G + G + A++ ++ L + + W+E
Sbjct: 121 TALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAA 170
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 1e-05
Identities = 27/203 (13%), Positives = 53/203 (26%), Gaps = 25/203 (12%)
Query: 101 SVDDLADQIAEVLNHFGLG-AVMC---MGVTAGAYILTLFAMKYRHRVLGLILVSP---- 152
D A + VL L AV+ G + + R+ + ++
Sbjct: 72 DYDTFAADLNTVLETLDLQDAVLVGFSTG---TGEVARYVSSYGTARIAKVAFLASLEPF 128
Query: 153 LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY--FSKEVRGNAQVPESDIVQACR 210
L K + + ++ G+ VK Y F + + + I +
Sbjct: 129 LLKTDDNPDGAAPQE-----FFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAV 183
Query: 211 R--LLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS---PFHSEAVHMTSK 265
R D + ++ +LI G P + A
Sbjct: 184 RNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKA 243
Query: 266 IDRRYSALVEVQACGSMVTEEQP 288
+ + VEV+ +
Sbjct: 244 LPS--AEYVEVEGAPHGLLWTHA 264
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 23/208 (11%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
S LA +L G+ +G + G + T +A+ Y +V L+LV+P+
Sbjct: 96 SFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI--GLEDW 153
Query: 161 EWLYNKVMSNLLYYYGMCGV----VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER 216
+ L S +Y +++ Y++ E R R E
Sbjct: 154 KALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRES 213
Query: 217 QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----------SSPFHSEAVHMTSKI 266
+ N + I + L +LQ +L+ +GE + + +++
Sbjct: 214 VAWNSALTYDMI-FTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQL 272
Query: 267 DRRYSA------LVEVQACGSMVTEEQP 288
+ + LVE G + P
Sbjct: 273 GKDAARRIPQATLVEFPDLGHTPQIQAP 300
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 3e-05
Identities = 17/201 (8%), Positives = 47/201 (23%), Gaps = 26/201 (12%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR-HRVLGLILVSPLCKAPSW 159
+ E+L+ G+ + + + G ++L + R I++ L AP
Sbjct: 75 GYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKP 134
Query: 160 TEWLYNKVMSN-LLYYYGMCGVVKELL-------LKRYFSKEVRGNAQVPESDIVQACRR 211
++ + + G G+ L ++ + +E+ +
Sbjct: 135 DFAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIED 194
Query: 212 LLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR 269
G P + + +
Sbjct: 195 AYGRN-------------GSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPW- 240
Query: 270 YSALVEVQACGSMVTEEQPHA 290
+ ++ + P
Sbjct: 241 -FSYAKLGGPTHFPAIDVPDR 260
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 28/198 (14%), Positives = 54/198 (27%), Gaps = 26/198 (13%)
Query: 101 SVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159
+ D + + + V +G + G ++ + V L+L+
Sbjct: 87 TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEI 146
Query: 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSS 219
E L + Y +E + + K + + + ++
Sbjct: 147 HEDLR------PIINYDF---TREGM--VHLVKALTNDGFKIDDAMI---NSRYTYATDE 192
Query: 220 NVWHFLEAI-------NGRPDISEGLRKLQCRSLIFVGESSPF--HSEAVHMTSKIDRRY 270
A G E +RK+Q +L+ G+ A ID
Sbjct: 193 ATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDD-- 250
Query: 271 SALVEVQACGSMVTEEQP 288
S + CG E P
Sbjct: 251 SWGYIIPHCGHWAMIEHP 268
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 27/204 (13%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILV--SPLCKAPS 158
S ++ +A VL GA +G++ G A V L+LV +P
Sbjct: 128 SPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRH 187
Query: 159 WTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA------QVPESDIVQACRRL 212
+ L++ + + S + + + +
Sbjct: 188 AELTAEQRGTVALMH-----------GEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHN 236
Query: 213 LDERQSSN-VWHF--LEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRR 269
+ N VW + + + + + L + G SS F ++ +++ RR
Sbjct: 237 SRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDT--AELHRR 294
Query: 270 ---YSALVEVQACGSMVTEEQPHA 290
+ + V+ G V +QP A
Sbjct: 295 ATHFRGVHIVEKSGHSVQSDQPRA 318
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 4e-04
Identities = 16/70 (22%), Positives = 26/70 (37%)
Query: 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161
DL I + H G+ G + G+ + +A + +V L+L E
Sbjct: 85 TWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELE 144
Query: 162 WLYNKVMSNL 171
W Y + S L
Sbjct: 145 WFYQEGASRL 154
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 6e-04
Identities = 12/69 (17%), Positives = 22/69 (31%)
Query: 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161
L I + G+ + G + G+ + +A + RV ++L
Sbjct: 88 TWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLH 147
Query: 162 WLYNKVMSN 170
W Y S
Sbjct: 148 WYYQDGASR 156
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 7e-04
Identities = 36/253 (14%), Positives = 71/253 (28%), Gaps = 33/253 (13%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV-------MCMGVTAGAYILTLF 136
H G + + E LS + +A + V+ MG GA +
Sbjct: 75 RSH--GETKVKNPED-LSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMG---GAIAVHTA 128
Query: 137 AMKYRHRVLGLILV-----SPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191
+ +LGL ++ + + S +L + + + VK ++ S
Sbjct: 129 SSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLES 188
Query: 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHF-LEAI-----NGRPDISEGLRKLQCRS 245
V QV + + ++ W L +S
Sbjct: 189 ARVSMVGQVKQCE--GITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPK 246
Query: 246 LIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303
L+ + + I + + + CG V E+ P + + FL+ +
Sbjct: 247 LLLLAGVDRLDKDLT-----IGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHR 301
Query: 304 LYRPTLSVSPRSP 316
P P
Sbjct: 302 FAEPIGGFQCVFP 314
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 8e-04
Identities = 33/210 (15%), Positives = 61/210 (29%), Gaps = 21/210 (10%)
Query: 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160
A + + + GLG V +G G FA+ Y R L+L+ P + +
Sbjct: 88 FNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLF 147
Query: 161 EWLYNKVMSNLLYYYGMCGV--VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLD---- 214
+ + L + ++ L + K + ++V L
Sbjct: 148 APDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDK-----NLITP-ELVDQRFALASTPES 201
Query: 215 -ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE----SSPFHSEAVHMTSKIDRR 269
+ F A + + +L+ L+ G + + I R
Sbjct: 202 LTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVAL--KTIPR- 258
Query: 270 YSALVEVQACGSMVTEEQPHAMLIPMEYFL 299
+ L CG V E+ FL
Sbjct: 259 -AQLHVFGQCGHWVQVEKFDEFNKLTIEFL 287
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 8e-04
Identities = 33/228 (14%), Positives = 66/228 (28%), Gaps = 38/228 (16%)
Query: 84 PGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143
G G + + D + +L G+ + +G + G + L A R
Sbjct: 64 RGR--GDSDYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPAR 121
Query: 144 VLGLILVSP---------------LCKAPSWTEW--LYNKVMSNLLYYYGMCGVVKELLL 186
+ +L + + ++ W + + Y + + L
Sbjct: 122 IAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRY 181
Query: 187 KRYFSKEVRGNAQVPESD--IVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244
+ + D I + + ++W +A+ RP
Sbjct: 182 AKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRP------------ 229
Query: 245 SLIFVGESSPFHSEAVH--MTSKIDRRYSALVEVQACGSMVTEEQPHA 290
L+ GE+S S M S R LV + G T ++P +
Sbjct: 230 LLVLRGETSDILSAQTAAKMAS---RPGVELVTLPRIGHAPTLDEPES 274
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 348 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.98 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.98 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.98 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.98 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.98 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.98 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.97 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.97 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.97 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.97 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.95 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.97 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.97 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.97 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.97 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.96 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.96 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.96 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.96 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.96 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.96 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.96 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.95 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.94 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.94 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.94 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.94 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.94 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.94 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.93 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.93 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.93 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.93 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.92 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.92 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.92 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.92 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.92 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.92 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.92 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.92 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.92 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.92 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.92 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.91 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.91 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.91 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.9 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.9 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.9 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.89 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.89 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.89 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.89 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.89 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.89 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.88 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.88 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.88 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.88 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.88 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.88 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.88 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.87 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.87 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.87 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.87 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.86 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.86 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.86 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.86 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.86 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.86 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.85 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.85 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.85 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.85 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.85 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.85 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.84 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.84 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.84 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.84 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.84 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.84 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.83 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.83 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.83 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.83 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.82 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.82 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.82 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.81 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.81 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.81 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.81 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.81 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.8 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.8 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.79 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.79 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.79 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.79 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.78 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.78 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.78 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.78 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.78 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.78 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.77 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.77 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.77 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.77 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.76 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.75 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.74 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.74 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.73 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.72 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.72 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.72 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.72 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.72 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.72 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.71 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.71 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.71 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.71 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.71 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.69 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.69 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.68 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.67 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.66 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.65 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.65 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.64 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.63 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.63 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.62 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.61 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.6 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.6 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.59 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.58 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.54 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.51 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.5 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.47 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.45 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.44 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.42 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.37 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.3 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.22 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.1 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.06 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.9 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.65 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.61 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.6 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.57 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.55 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.52 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.44 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.42 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.3 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.25 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.23 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.2 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.17 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.16 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.15 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.15 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.06 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.03 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.87 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.85 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.82 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.79 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.78 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.75 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 97.74 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.66 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.44 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.35 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.3 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.19 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.16 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.89 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.62 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.59 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.45 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.44 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.4 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 95.97 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 95.95 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 95.5 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 94.67 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 94.63 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 94.28 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 94.12 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 93.75 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 92.93 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 92.78 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 92.35 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 92.26 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 90.7 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=279.36 Aligned_cols=256 Identities=16% Similarity=0.243 Sum_probs=192.1
Q ss_pred ceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
.++..+|.+++|...|++++|+|||+||++.+...|... ...+.++|+||++|+||||.|+.+ ...+++
T Consensus 8 ~~~~~~g~~l~y~~~G~~~~p~lvl~hG~~~~~~~w~~~-------~~~L~~~~~vi~~D~rG~G~S~~~----~~~~~~ 76 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQ-------LPALTRHFRVLRYDARGHGASSVP----PGPYTL 76 (266)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGGGG-------HHHHHTTCEEEEECCTTSTTSCCC----CSCCCH
T ss_pred EEeccCCcEEEEEecCCCCCCEEEEeCCCccCHHHHHHH-------HHHhhcCcEEEEEcCCCCCCCCCC----CCCCCH
Confidence 345668889999999977789999999999998766432 355667999999999999999754 235899
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHH
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (348)
+++++|+.++++++++++++++||||||.+++.+|.++|++|+++|++++.........+... ........++....
T Consensus 77 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~- 153 (266)
T 3om8_A 77 ARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDER--IAAVLQAEDMSETA- 153 (266)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHH--HHHHHHCSSSHHHH-
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHH--HHHHHccccHHHHH-
Confidence 999999999999999999999999999999999999999999999999987665433333211 11111111222222
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHH
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 260 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~ 260 (348)
...+..++.+..... .+...+.+...+.......+...+..+.. .+..+.+.++++|+|+|+|++|.++ ...+
T Consensus 154 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~ 228 (266)
T 3om8_A 154 AGFLGNWFPPALLER----AEPVVERFRAMLMATNRHGLAGSFAAVRD-TDLRAQLARIERPTLVIAGAYDTVTAASHGE 228 (266)
T ss_dssp HHHHHHHSCHHHHHS----CCHHHHHHHHHHHTSCHHHHHHHHHHHHT-CBCTTTGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HHHHHHhcChhhhhc----ChHHHHHHHHHHHhCCHHHHHHHHHHhhc-cchhhHhcCCCCCEEEEEeCCCCCCCHHHHH
Confidence 334445554433221 34445555555544444445544444433 5667778999999999999999988 3556
Q ss_pred HHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 261 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
.+++.+++ +++++++ +||++++|+|++|++.|.+||+
T Consensus 229 ~l~~~ip~--a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 229 LIAASIAG--ARLVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHSTT--CEEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred HHHHhCCC--CEEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 78899988 9999997 8999999999999999999986
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=264.64 Aligned_cols=257 Identities=15% Similarity=0.236 Sum_probs=183.4
Q ss_pred ceeecCCceeEEEEccCCC--CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~~--~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
.+++.+|.+++|...|+++ +|+|||+||++++...|... ...+.++|+|+++|+||||.|+.+ ...+
T Consensus 5 ~~~~~~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~-------~~~L~~~~~vi~~D~~G~G~S~~~----~~~~ 73 (266)
T 2xua_A 5 PYAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQ-------VAALSKHFRVLRYDTRGHGHSEAP----KGPY 73 (266)
T ss_dssp CEEECSSSEEEEEEESCSSSCCCEEEEECCTTCCGGGGGGG-------HHHHHTTSEEEEECCTTSTTSCCC----SSCC
T ss_pred CeEEECCEEEEEEEcCCccCCCCeEEEecCccCCHHHHHHH-------HHHHhcCeEEEEecCCCCCCCCCC----CCCC
Confidence 3567789999999999655 89999999999998765422 244567899999999999999754 2358
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchh
Q 018947 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (348)
+++++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.........+... ... ....+....
T Consensus 74 ~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~ 150 (266)
T 2xua_A 74 TIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPR--AVK-ARTEGMHAL 150 (266)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHH--HHH-HHHHCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHH--HHH-HHhcChHHH
Confidence 99999999999999999999999999999999999999999999999999987655332222111 000 111111111
Q ss_pred HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--h
Q 018947 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--E 258 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~ 258 (348)
. ......++....... .++..+.+...+.......+......+.. .+..+.+.++++|+++|+|++|.+++ .
T Consensus 151 ~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 224 (266)
T 2xua_A 151 A-DAVLPRWFTADYMER----EPVVLAMIRDVFVHTDKEGYASNCEAIDA-ADLRPEAPGIKVPALVISGTHDLAATPAQ 224 (266)
T ss_dssp H-HHHHHHHSCHHHHHH----CHHHHHHHHHHHHTSCHHHHHHHHHHHHH-CCCGGGGGGCCSCEEEEEETTCSSSCHHH
T ss_pred H-HHHHHHHcCcccccC----CHHHHHHHHHHHhhCCHHHHHHHHHHHhc-cCchhhhccCCCCEEEEEcCCCCcCCHHH
Confidence 1 222233333221110 23333444444433333333333333222 34556788999999999999999984 4
Q ss_pred HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 259 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.+++.+++ +++++++ +||++++|+|+++++.|.+||++.
T Consensus 225 ~~~~~~~~~~--~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 265 (266)
T 2xua_A 225 GRELAQAIAG--ARYVELD-ASHISNIERADAFTKTVVDFLTEQ 265 (266)
T ss_dssp HHHHHHHSTT--CEEEEES-CCSSHHHHTHHHHHHHHHHHHTC-
T ss_pred HHHHHHhCCC--CEEEEec-CCCCchhcCHHHHHHHHHHHHHhc
Confidence 5668888887 8999999 999999999999999999999753
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-37 Score=259.17 Aligned_cols=255 Identities=15% Similarity=0.185 Sum_probs=171.6
Q ss_pred ceeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018947 30 GSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 30 ~~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
|.++|..+|+ +++|+|||+||++++...|... ...+.++|+||++|+||||.|..+. ...++++++++
T Consensus 1 ~~i~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~-------~~~L~~~~~vi~~Dl~G~G~S~~~~---~~~~~~~~~a~ 70 (268)
T 3v48_A 1 GHMKLSLSPPPYADAPVVVLISGLGGSGSYWLPQ-------LAVLEQEYQVVCYDQRGTGNNPDTL---AEDYSIAQMAA 70 (268)
T ss_dssp CCSCCEECCCSSTTCCEEEEECCTTCCGGGGHHH-------HHHHHTTSEEEECCCTTBTTBCCCC---CTTCCHHHHHH
T ss_pred CceEEEecCCCCCCCCEEEEeCCCCccHHHHHHH-------HHHHhhcCeEEEECCCCCCCCCCCc---cccCCHHHHHH
Confidence 4577888875 4689999999999998765322 3556778999999999999997542 24589999999
Q ss_pred HHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 018947 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (348)
Q Consensus 108 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (348)
|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++............... .......+..... .....
T Consensus 71 dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~ 148 (268)
T 3v48_A 71 ELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVR-ERLLYSGGAQAWV-EAQPL 148 (268)
T ss_dssp HHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHH-HHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHcCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHH-HHHHhccchhhhh-hhhhh
Confidence 999999999999999999999999999999999999999999998765543322111110 0111100100110 00000
Q ss_pred hhhcccccCCCCCCChHHHHHHHHHHhh-hchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHH
Q 018947 188 RYFSKEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTS 264 (348)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~ 264 (348)
..+........ .............. .....+...+..+.. .+....+.++++|+|+|+|++|.++ ...+.+.+
T Consensus 149 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~ 224 (268)
T 3v48_A 149 FLYPADWMAAR---APRLEAEDALALAHFQGKNNLLRRLNALKR-ADFSHHADRIRCPVQIICASDDLLVPTACSSELHA 224 (268)
T ss_dssp HHSCHHHHHTT---HHHHHHHHHHHHHTCCCHHHHHHHHHHHHH-CBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHH
T ss_pred hcCchhhhhcc---cccchhhHHHHHhhcCchhHHHHHHHHHhc-cchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHH
Confidence 00100000000 01111111111111 111222222222222 3456678899999999999999988 34567888
Q ss_pred hhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 265 KIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 265 ~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+++ +++++++++||++++|+|++|++.|.+||++.
T Consensus 225 ~~p~--~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 225 ALPD--SQKMVMPYGGHACNVTDPETFNALLLNGLASL 260 (268)
T ss_dssp HCSS--EEEEEESSCCTTHHHHCHHHHHHHHHHHHHHH
T ss_pred hCCc--CeEEEeCCCCcchhhcCHHHHHHHHHHHHHHh
Confidence 8987 99999999999999999999999999999875
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=261.95 Aligned_cols=253 Identities=16% Similarity=0.121 Sum_probs=172.2
Q ss_pred cceeecCCceeEEEEccCCCCCeEEEeCCCCCChh-hhccccccchhhhhhccCCeEEEEeCCCCCCCCCC-CCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYM-SCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-AISDDEPV 99 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~-~~~~~~~~ 99 (348)
..++..+|.+++|...|++++|+|||+||++++.. .|... ...++++|+||++|+||||.|+. +. ....
T Consensus 5 ~~~~~~~g~~l~~~~~G~~~~~~vvllHG~~~~~~~~w~~~-------~~~L~~~~~vi~~Dl~G~G~S~~~~~--~~~~ 75 (286)
T 2yys_A 5 IGYVPVGEAELYVEDVGPVEGPALFVLHGGPGGNAYVLREG-------LQDYLEGFRVVYFDQRGSGRSLELPQ--DPRL 75 (286)
T ss_dssp EEEEECSSCEEEEEEESCTTSCEEEEECCTTTCCSHHHHHH-------HGGGCTTSEEEEECCTTSTTSCCCCS--CGGG
T ss_pred eeEEeECCEEEEEEeecCCCCCEEEEECCCCCcchhHHHHH-------HHHhcCCCEEEEECCCCCCCCCCCcc--Cccc
Confidence 34677889999999999777899999999999987 55432 24557899999999999999975 31 1115
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHH-----------HHHH
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-----------NKVM 168 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-----------~~~~ 168 (348)
++++++++|+.+++++++.++++|+||||||.+|+.+|.++|+ |+++|++++............ ...+
T Consensus 76 ~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (286)
T 2yys_A 76 FTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENL 154 (286)
T ss_dssp CCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHHHH
T ss_pred CcHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHHHH
Confidence 8999999999999999999999999999999999999999999 999999998762110000000 0000
Q ss_pred HHHHHhhccchhHHHHHHHhhh--cccccCCCCCCChHHHH-HHHHHHhhhchhhHHHH--HHHHcCCccHHhhhccCCc
Q 018947 169 SNLLYYYGMCGVVKELLLKRYF--SKEVRGNAQVPESDIVQ-ACRRLLDERQSSNVWHF--LEAINGRPDISEGLRKLQC 243 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~ 243 (348)
...+..... ......+. .+. ..... ................. +..+ ...+..+.+.++++
T Consensus 155 ~~~~~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~ 219 (286)
T 2yys_A 155 KEALKREEP-----KALFDRLMFPTPR---------GRMAYEWLAEGAGILGSDAPGLAFLRNGL-WRLDYTPYLTPERR 219 (286)
T ss_dssp HHHHHHSCH-----HHHHHHHHCSSHH---------HHHHHHHHHHHTTCCCCSHHHHHHHHTTG-GGCBCGGGCCCCSS
T ss_pred HHHhccCCh-----HHHHHhhhccCCc---------cccChHHHHHHHhhccccccchhhccccc-ccCChhhhhhhcCC
Confidence 000000000 11111111 100 00011 11111111101111111 1111 11245566888999
Q ss_pred cEEEEecCCCCCCc-hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 244 RSLIFVGESSPFHS-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 244 Pvl~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|+|+|+|++|.+++ ..+.+++ +++ +++++++++||++++|+|+++++.|.+||++.
T Consensus 220 P~lvi~G~~D~~~~~~~~~~~~-~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 220 PLYVLVGERDGTSYPYAEEVAS-RLR--APIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp CEEEEEETTCTTTTTTHHHHHH-HHT--CCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred CEEEEEeCCCCcCCHhHHHHHh-CCC--CCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 99999999999882 2666888 887 89999999999999999999999999999875
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=261.79 Aligned_cols=274 Identities=10% Similarity=0.067 Sum_probs=176.6
Q ss_pred CCccceeecCCceeEEEEccCC--C--CCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCC
Q 018947 19 SGKDNLIKTSHGSLSVTIYGDQ--D--KPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 19 ~~~~~~v~~~~~~l~~~~~g~~--~--~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~ 93 (348)
..++.++.++|.+++|...|+. + +++|||+||++++...|...+ ..+.. .+|+||++|+||||.|+...
T Consensus 27 ~~~~~~v~~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~------~~l~~~~~~~Via~D~rG~G~S~~~~ 100 (330)
T 3nwo_A 27 PVSSRTVPFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANI------AALADETGRTVIHYDQVGCGNSTHLP 100 (330)
T ss_dssp --CEEEEEETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGG------GGHHHHHTCCEEEECCTTSTTSCCCT
T ss_pred cCcceeEeecCcEEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHH------HHhccccCcEEEEECCCCCCCCCCCC
Confidence 3466788999999999999963 3 348999999988877665333 44444 69999999999999997532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH--H---
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV--M--- 168 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~--- 168 (348)
+.....++++++++|+.++++++++++++|+||||||++++.+|.++|++|.++|++++......+........ .
T Consensus 101 ~~~~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 180 (330)
T 3nwo_A 101 DAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAE 180 (330)
T ss_dssp TSCGGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHH
T ss_pred CCccccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHH
Confidence 22234589999999999999999999999999999999999999999999999999998765322211110000 0
Q ss_pred -HHHHH----hhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHH-------HHcCCccHHh
Q 018947 169 -SNLLY----YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLE-------AINGRPDISE 236 (348)
Q Consensus 169 -~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 236 (348)
...+. ...............++....... ..........+.... .....+..... ......+..+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (330)
T 3nwo_A 181 TRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRV-VPTPQDFADSVAQME--AEPTVYHTMNGPNEFHVVGTLGDWSVID 257 (330)
T ss_dssp HHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCS-SSCCHHHHHHHHHHH--HSCHHHHHHTCSCSSSCCSGGGGCBCGG
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccc-cCCCHHHHHHHHhhc--cchhhhhcccCchhhhhhccccCCchhh
Confidence 00000 000000000000001111000000 000111111111110 01100100000 0001124456
Q ss_pred hhccCCccEEEEecCCCCCC-chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 237 GLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 237 ~l~~i~~Pvl~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
.+.++++|+|+|+|++|.++ .....+.+.+++ +++++++++||++++|+|++|++.|.+||++..
T Consensus 258 ~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~ip~--~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 258 RLPDVTAPVLVIAGEHDEATPKTWQPFVDHIPD--VRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQHD 323 (330)
T ss_dssp GGGGCCSCEEEEEETTCSSCHHHHHHHHHHCSS--EEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred hcccCCCCeEEEeeCCCccChHHHHHHHHhCCC--CcEEEeCCCCCchhhcCHHHHHHHHHHHHHhcc
Confidence 78899999999999999988 345567888887 999999999999999999999999999998864
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-37 Score=264.33 Aligned_cols=263 Identities=8% Similarity=0.013 Sum_probs=172.2
Q ss_pred CCccceeecCC----ceeEEEEccCCC-CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 19 SGKDNLIKTSH----GSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 19 ~~~~~~v~~~~----~~l~~~~~g~~~-~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
..+..++.+++ .+++|...|+++ +|+|||+||++++...|.... ..+..+||+||++|+||||.|+.+.
T Consensus 19 ~~~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~------~~L~~~g~rvia~Dl~G~G~S~~~~ 92 (310)
T 1b6g_A 19 PFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMI------PVFAESGARVIAPDFFGFGKSDKPV 92 (310)
T ss_dssp CCCCEEEESCTTCTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTH------HHHHHTTCEEEEECCTTSTTSCEES
T ss_pred CCCceEEEecCCccceEEEEEEeCCCCCCCEEEEECCCCCchhhHHHHH------HHHHhCCCeEEEeCCCCCCCCCCCC
Confidence 33456788888 899999999766 899999999999887654322 4454567999999999999998542
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC--CCC--hHHH------H
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK--APS--WTEW------L 163 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~--~~~--~~~~------~ 163 (348)
....|+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++... ... .... .
T Consensus 93 --~~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~ 170 (310)
T 1b6g_A 93 --DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPAD 170 (310)
T ss_dssp --CGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTT
T ss_pred --CcCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccch
Confidence 124689999999999999999999999999999999999999999999999999998653 110 0000 0
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHHcC--------CccH
Q 018947 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAING--------RPDI 234 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~ 234 (348)
........... .............. ... .++..+.+...+.... ......+...+.. ..+.
T Consensus 171 ~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 1b6g_A 171 GFTAWKYDLVT--PSDLRLDQFMKRWA-PTL-------TEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEA 240 (310)
T ss_dssp THHHHHHHHHS--CSSCCHHHHHHHHS-TTC-------CHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcc--CchhhhhhHHhhcC-CCC-------CHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhH
Confidence 00000000000 00000000111000 000 1222222211110000 0001111111000 0123
Q ss_pred Hhhhc-cCCccEEEEecCCCCCCc-hHHHHHHhhccCCcEEEEe--cCCCCCccccChhhhHHHHHHHHhhc
Q 018947 235 SEGLR-KLQCRSLIFVGESSPFHS-EAVHMTSKIDRRYSALVEV--QACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 235 ~~~l~-~i~~Pvl~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~--~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.+. ++++|+|+|+|++|.+++ ....+++.+++ ++++++ +++||++++ +|++|++.|.+||++.
T Consensus 241 ~~~l~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~ip~--~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 241 ISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALIN--GCPEPLEIADAGHFVQE-FGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHST--TCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHHT
T ss_pred hhhhhccccCceEEEeccCcchhhhHHHHHHHhccc--ccceeeecCCcccchhh-ChHHHHHHHHHHHhcc
Confidence 45677 899999999999999885 44568888887 666666 999999999 9999999999999764
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=254.09 Aligned_cols=255 Identities=11% Similarity=0.119 Sum_probs=174.7
Q ss_pred cCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH
Q 018947 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (348)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (348)
.++.+++|...| .+++|||+||++++...|.... ..+.++||+||++|+||||.|+.+ ...+++++++
T Consensus 14 ~~g~~l~y~~~G--~g~~vvllHG~~~~~~~w~~~~------~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~a 81 (281)
T 3fob_A 14 QAPIEIYYEDHG--TGKPVVLIHGWPLSGRSWEYQV------PALVEAGYRVITYDRRGFGKSSQP----WEGYEYDTFT 81 (281)
T ss_dssp TEEEEEEEEEES--SSEEEEEECCTTCCGGGGTTTH------HHHHHTTEEEEEECCTTSTTSCCC----SSCCSHHHHH
T ss_pred CCceEEEEEECC--CCCeEEEECCCCCcHHHHHHHH------HHHHhCCCEEEEeCCCCCCCCCCC----ccccCHHHHH
Confidence 456789999999 5788999999999987764333 456678999999999999999754 2458999999
Q ss_pred HHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCC--------Ch-HHHHHHHHHHHHHHhhc
Q 018947 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAP--------SW-TEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 107 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~ 176 (348)
+|+.++++++++++++|+||||||.+++.+++.+ |++|+++|++++..... .. ..... ..+...... .
T Consensus 82 ~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~ 159 (281)
T 3fob_A 82 SDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATI-ETFKSGVIN-D 159 (281)
T ss_dssp HHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHH-HHHHHHHHH-H
T ss_pred HHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHH-HHHHHHhhh-h
Confidence 9999999999999999999999999888877765 89999999999753210 00 00000 000000000 0
Q ss_pred cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC
Q 018947 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~ 256 (348)
..... ..+...++....... .........................+..+.. .+..+.+.++++|+|+|+|++|.++
T Consensus 160 ~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~l~~i~~P~Lii~G~~D~~~ 235 (281)
T 3fob_A 160 RLAFL-DEFTKGFFAAGDRTD--LVSESFRLYNWDIAAGASPKGTLDCITAFSK-TDFRKDLEKFNIPTLIIHGDSDATV 235 (281)
T ss_dssp HHHHH-HHHHHHHTCBTTBCC--SSCHHHHHHHHHHHHTSCHHHHHHHHHHHHH-CCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred HHHHH-HHHHHHhcccccccc--cchHHHHHHhhhhhcccChHHHHHHHHHccc-cchhhhhhhcCCCEEEEecCCCCCc
Confidence 00111 222333333221110 1123333333222222333333333433322 4666778999999999999999998
Q ss_pred ch--H-HHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 257 SE--A-VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 257 ~~--~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+. . ..+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 236 p~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 281 (281)
T 3fob_A 236 PFEYSGKLTHEAIPN--SKVALIKGGPHGLNATHAKEFNEALLLFLKD 281 (281)
T ss_dssp CGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhCCC--ceEEEeCCCCCchhhhhHHHHHHHHHHHhhC
Confidence 42 2 456777887 9999999999999999999999999999963
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=252.29 Aligned_cols=258 Identities=14% Similarity=0.120 Sum_probs=172.8
Q ss_pred CccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
....++..+|.+++|...| ++++|||+||++.+...|. .|... ...++++|+|+++|+||||.|+.+. ...
T Consensus 5 ~~~~~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~~~---~w~~~-~~~L~~~~~vi~~Dl~G~G~S~~~~---~~~ 75 (282)
T 1iup_A 5 EIGKSILAAGVLTNYHDVG--EGQPVILIHGSGPGVSAYA---NWRLT-IPALSKFYRVIAPDMVGFGFTDRPE---NYN 75 (282)
T ss_dssp TCCEEEEETTEEEEEEEEC--CSSEEEEECCCCTTCCHHH---HHTTT-HHHHTTTSEEEEECCTTSTTSCCCT---TCC
T ss_pred cccceEEECCEEEEEEecC--CCCeEEEECCCCCCccHHH---HHHHH-HHhhccCCEEEEECCCCCCCCCCCC---CCC
Confidence 3456788899999999998 5789999999976554221 01112 2455789999999999999997542 125
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccch
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (348)
++++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++........... .. .+.......
T Consensus 76 ~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~--~~---~~~~~~~~~ 150 (282)
T 1iup_A 76 YSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGL--NA---VWGYTPSIE 150 (282)
T ss_dssp CCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHH--HH---HHTCCSCHH
T ss_pred CCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHH--HH---HhcCCCcHH
Confidence 8999999999999999999999999999999999999999999999999999876532111111 00 000000000
Q ss_pred hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCC---------ccHHhhhccCCccEEEEec
Q 018947 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR---------PDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~i~~Pvl~i~g 250 (348)
.. ...+..++...... ..+..+...... ..+. ....+..+... ....+.+.++++|+|+|+|
T Consensus 151 ~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 221 (282)
T 1iup_A 151 NM-RNLLDIFAYDRSLV-----TDELARLRYEAS--IQPG-FQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHG 221 (282)
T ss_dssp HH-HHHHHHHCSSGGGC-----CHHHHHHHHHHH--TSTT-HHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEE
T ss_pred HH-HHHHHHhhcCcccC-----CHHHHHHHHhhc--cChH-HHHHHHHHHhccccccccccccchhhhhhcCCCEEEEec
Confidence 11 11112111111000 222222111111 0111 11111111110 0012567889999999999
Q ss_pred CCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 251 ESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 251 ~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++|.+++ ....+.+.+++ +++++++++||++++|+|+++++.|.+||++.
T Consensus 222 ~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 273 (282)
T 1iup_A 222 REDQVVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 273 (282)
T ss_dssp TTCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHhCCC--CeEEEECCCCCCccccCHHHHHHHHHHHHhcC
Confidence 9999983 45568888887 89999999999999999999999999999874
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=258.99 Aligned_cols=259 Identities=12% Similarity=0.019 Sum_probs=169.0
Q ss_pred ccceeecCC----ceeEEEEccCCC-CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSH----GSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 21 ~~~~v~~~~----~~l~~~~~g~~~-~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
+..++++++ .+++|...|+++ +|+|||+||++++...|.... ..+..+||+||++|+||||.|+.+.
T Consensus 20 ~~~~~~~~g~~~g~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~------~~L~~~g~rvia~Dl~G~G~S~~~~-- 91 (297)
T 2xt0_A 20 APHYLEGLPGFEGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKML------PVFTAAGGRVVAPDLFGFGRSDKPT-- 91 (297)
T ss_dssp CCEEECCCTTCTTCCEEEEEESCTTCSCEEEEECCTTCCGGGGTTTH------HHHHHTTCEEEEECCTTSTTSCEES--
T ss_pred ccEEEeccCCCCceEEEEEEccCCCCCCeEEEECCCCCcceeHHHHH------HHHHhCCcEEEEeCCCCCCCCCCCC--
Confidence 455777887 899999999656 899999999998887654322 4455568999999999999998542
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh-HHHHHHHHHHHHHHh
Q 018947 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMSNLLYY 174 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~ 174 (348)
....++++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++....... .... ..+......
T Consensus 92 ~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~ 169 (297)
T 2xt0_A 92 DDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGF--ESWRDFVAN 169 (297)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHH--HHHHHHHHT
T ss_pred CcccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhH--HHHHHHhhc
Confidence 1246899999999999999999999999999999999999999999999999999986522111 1100 000010000
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcC----------CccHHhhhc-cCCc
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING----------RPDISEGLR-KLQC 243 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~-~i~~ 243 (348)
.........+.... ... ..+....+...+...........+..... ..+..+.+. ++++
T Consensus 170 --~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 239 (297)
T 2xt0_A 170 --SPDLDVGKLMQRAI-PGI-------TDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSG 239 (297)
T ss_dssp --CTTCCHHHHHHHHS-TTC-------CHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCS
T ss_pred --ccccchhHHHhccC-ccC-------CHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCC
Confidence 00000001111110 000 12222222111000000000000000000 012335577 8999
Q ss_pred cEEEEecCCCCCCc-hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 244 RSLIFVGESSPFHS-EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 244 Pvl~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
|+|+|+|++|.+++ ....+.+.+++.....+.++++||++++ +|++|++.|.+||+
T Consensus 240 P~Lvi~G~~D~~~~~~~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 240 PTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp CEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred CeEEEEeCCCcccChHHHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 99999999999884 4556888888733333447899999999 99999999999986
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=262.44 Aligned_cols=267 Identities=13% Similarity=0.119 Sum_probs=173.2
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
+..++.++|.+++|...|+..+|+|||+||++++...|... ...+.++|+||++|+||||.|+.+ ...+
T Consensus 8 ~~~~~~~~g~~l~y~~~G~g~~~pvvllHG~~~~~~~w~~~-------~~~L~~~~~via~Dl~G~G~S~~~----~~~~ 76 (316)
T 3afi_E 8 EIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWRNI-------LPLVSPVAHCIAPDLIGFGQSGKP----DIAY 76 (316)
T ss_dssp --CEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGGTTT-------HHHHTTTSEEEEECCTTSTTSCCC----SSCC
T ss_pred cceeEEeCCEEEEEEEeCCCCCCeEEEECCCCCchHHHHHH-------HHHHhhCCEEEEECCCCCCCCCCC----CCCC
Confidence 34567788999999999953334999999999998766432 255667799999999999999754 2358
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH---------HHHHHHHHHH
Q 018947 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---------WLYNKVMSNL 171 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------~~~~~~~~~~ 171 (348)
+++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++......+.. ..........
T Consensus 77 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (316)
T 3afi_E 77 RFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAV 156 (316)
T ss_dssp CHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999997432111100 0000000000
Q ss_pred HHhhccchhHH------HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcC----------CccH
Q 018947 172 LYYYGMCGVVK------ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAING----------RPDI 234 (348)
Q Consensus 172 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~ 234 (348)
+.......... ..+...++...... ....+..+.+...+... .......+...+.. ..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T 3afi_E 157 FRKFRTPGEGEAMILEANAFVERVLPGGIVR---KLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSA 233 (316)
T ss_dssp HHHHTSTTHHHHHHTTSCHHHHTTTGGGCSS---CCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHH
T ss_pred HHHhcCCchhhHHHhccchHHHHhcccccCC---CCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHH
Confidence 00000000000 01111111110000 00222222222111000 00011111110000 0122
Q ss_pred HhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 235 SEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 235 ~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
...+.++++|+|+|+|++|.+++ ..+.+.+.+++ +++++++++||++++|+|++|++.|.+||++..
T Consensus 234 ~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~~ 302 (316)
T 3afi_E 234 HAALAASSYPKLLFTGEPGALVSPEFAERFAASLTR--CALIRLGAGLHYLQEDHADAIGRSVAGWIAGIE 302 (316)
T ss_dssp HHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSS--EEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCC--CeEEEcCCCCCCchhhCHHHHHHHHHHHHhhcC
Confidence 34567899999999999999884 55678888887 899999999999999999999999999998864
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=255.49 Aligned_cols=255 Identities=18% Similarity=0.171 Sum_probs=172.3
Q ss_pred eeecCC-ceeEEEEccCCCCCeEEEeCCCC---CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 24 LIKTSH-GSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 24 ~v~~~~-~~l~~~~~g~~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
++.++| .+++|...|++.+|+|||+||++ .+...|... ...+.++|+||++|+||||.|+.+. ...
T Consensus 17 ~~~~~g~~~l~y~~~G~g~~~~vvllHG~~pg~~~~~~w~~~-------~~~L~~~~~via~Dl~G~G~S~~~~---~~~ 86 (291)
T 2wue_A 17 EVDVDGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRN-------IAVLARHFHVLAVDQPGYGHSDKRA---EHG 86 (291)
T ss_dssp EEESSSEEEEEEEEECTTCSSEEEEECCCCTTCCHHHHTTTT-------HHHHTTTSEEEEECCTTSTTSCCCS---CCS
T ss_pred EEEeCCcEEEEEEecCCCCCCcEEEECCCCCccchHHHHHHH-------HHHHHhcCEEEEECCCCCCCCCCCC---CCC
Confidence 678889 89999999954445999999997 555544322 2455667999999999999998542 125
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC-h----HHHHHHHHHHHHHHh
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-W----TEWLYNKVMSNLLYY 174 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~----~~~~~~~~~~~~~~~ 174 (348)
++++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++...... . .... ......+..
T Consensus 87 ~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 164 (291)
T 2wue_A 87 QFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGV--KRLSKFSVA 164 (291)
T ss_dssp SHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHH--HHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhh--HHHHHHhcc
Confidence 89999999999999999999999999999999999999999999999999998764221 0 1111 111111110
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHH---HcC--C--ccHHhhhccCCccEEE
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA---ING--R--PDISEGLRKLQCRSLI 247 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~--~~~~~~l~~i~~Pvl~ 247 (348)
...... ...+..++...... .++......... ..+......+.. ... . ....+.+.++++|+|+
T Consensus 165 -~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv 235 (291)
T 2wue_A 165 -PTRENL-EAFLRVMVYDKNLI-----TPELVDQRFALA--STPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLL 235 (291)
T ss_dssp -CCHHHH-HHHHHTSCSSGGGS-----CHHHHHHHHHHH--TSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEE
T ss_pred -CCHHHH-HHHHHHhccCcccC-----CHHHHHHHHHHh--cCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEE
Confidence 000111 11222211111000 223322222211 112222222211 111 0 1122567899999999
Q ss_pred EecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 248 FVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 248 i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
|+|++|.++ .....+++.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 236 i~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 236 IWGREDRVNPLDGALVALKTIPR--AQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp EEETTCSSSCGGGGHHHHHHSTT--EEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred EecCCCCCCCHHHHHHHHHHCCC--CeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 999999988 345678888887 8999999999999999999999999999975
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=254.82 Aligned_cols=265 Identities=13% Similarity=0.127 Sum_probs=171.8
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC-CCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEPV 99 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~ 99 (348)
+..++..+|.+++|...| ++|+|||+||++++...|... ...+.+.|+||++|+||||.|+.+ .. ....
T Consensus 10 ~~~~~~~~g~~l~y~~~G--~g~~lvllHG~~~~~~~w~~~-------~~~L~~~~~via~Dl~G~G~S~~~-~~~~~~~ 79 (294)
T 1ehy_A 10 KHYEVQLPDVKIHYVREG--AGPTLLLLHGWPGFWWEWSKV-------IGPLAEHYDVIVPDLRGFGDSEKP-DLNDLSK 79 (294)
T ss_dssp CEEEEECSSCEEEEEEEE--CSSEEEEECCSSCCGGGGHHH-------HHHHHTTSEEEEECCTTSTTSCCC-CTTCGGG
T ss_pred ceeEEEECCEEEEEEEcC--CCCEEEEECCCCcchhhHHHH-------HHHHhhcCEEEecCCCCCCCCCCC-ccccccC
Confidence 345677889999999999 678999999999988765422 345566799999999999999854 10 1125
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH---------HHHHH---H
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---------WLYNK---V 167 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---------~~~~~---~ 167 (348)
++++++++|+.++++++++++++++||||||.+++.+|.++|++|+++|++++......... +.... .
T Consensus 80 ~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T 1ehy_A 80 YSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLD 159 (294)
T ss_dssp GCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCH
T ss_pred cCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcc
Confidence 89999999999999999999999999999999999999999999999999997432111100 00000 0
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHHcCC-ccH--HhhhccCCc
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGR-PDI--SEGLRKLQC 243 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~--~~~l~~i~~ 243 (348)
...... .+..... ......++...... ......+..+.+........ ......++..+... ... ...+.++++
T Consensus 160 ~~~~~~-~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 236 (294)
T 1ehy_A 160 MAVEVV-GSSREVC-KKYFKHFFDHWSYR-DELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDL 236 (294)
T ss_dssp HHHHHH-TSCHHHH-HHHHHHHHHHTSSS-SCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCS
T ss_pred hhHHHh-ccchhHH-HHHHHHHhhcccCC-CCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCC
Confidence 000000 0000000 11112221111100 00012333333333322111 11112222222110 011 123558999
Q ss_pred cEEEEecCCCCCCc---hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 244 RSLIFVGESSPFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 244 Pvl~i~g~~D~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
|+|+|+|++|.+++ ....+.+.+++ +++++++++||++++|+|+++++.|.+||+
T Consensus 237 P~Lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 294 (294)
T 1ehy_A 237 PVTMIWGLGDTCVPYAPLIEFVPKYYSN--YTMETIEDCGHFLMVEKPEIAIDRIKTAFR 294 (294)
T ss_dssp CEEEEEECCSSCCTTHHHHHHHHHHBSS--EEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred CEEEEEeCCCCCcchHHHHHHHHHHcCC--CceEEeCCCCCChhhhCHHHHHHHHHHHhC
Confidence 99999999999886 35567777776 999999999999999999999999999973
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-36 Score=251.73 Aligned_cols=256 Identities=16% Similarity=0.184 Sum_probs=172.8
Q ss_pred CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018947 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
.+.+++|...| ++++|||+||++++...|... ...+.++|+|+++|+||||.|..+.. ..++++++++
T Consensus 4 ~~~~~~y~~~G--~g~~vvllHG~~~~~~~~~~~-------~~~L~~~~~vi~~Dl~G~G~S~~~~~---~~~~~~~~~~ 71 (269)
T 2xmz_A 4 THYKFYEANVE--TNQVLVFLHGFLSDSRTYHNH-------IEKFTDNYHVITIDLPGHGEDQSSMD---ETWNFDYITT 71 (269)
T ss_dssp CSEEEECCSSC--CSEEEEEECCTTCCGGGGTTT-------HHHHHTTSEEEEECCTTSTTCCCCTT---SCCCHHHHHH
T ss_pred ccceEEEEEcC--CCCeEEEEcCCCCcHHHHHHH-------HHHHhhcCeEEEecCCCCCCCCCCCC---CccCHHHHHH
Confidence 35578888888 456899999999998776432 24556679999999999999975421 1589999999
Q ss_pred HHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH----HHHHHHhhccchhHHH
Q 018947 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV----MSNLLYYYGMCGVVKE 183 (348)
Q Consensus 108 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 183 (348)
|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++............... ....+..... .
T Consensus 72 dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 146 (269)
T 2xmz_A 72 LLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGI-----E 146 (269)
T ss_dssp HHHHHHGGGTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCH-----H
T ss_pred HHHHHHHHcCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccH-----H
Confidence 999999999999999999999999999999999999999999998765433222111100 0000000010 1
Q ss_pred HHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHc--CCccHHhhhccCCccEEEEecCCCCCC-chHH
Q 018947 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH-SEAV 260 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvl~i~g~~D~~~-~~~~ 260 (348)
.++..+..............+..+.+...........+...+..+. ...+..+.+.++++|+++|+|++|.++ ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 226 (269)
T 2xmz_A 147 LFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAK 226 (269)
T ss_dssp HHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHH
T ss_pred HHHHHHHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHH
Confidence 2222222211100000002223333322222223333333333321 223455678899999999999999987 3334
Q ss_pred HHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 261 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.+.+++ +++++++++||++++|+|+++++.|.+||++.
T Consensus 227 ~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 227 KMANLIPN--SKCKLISATGHTIHVEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHHHSTT--EEEEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred HHHhhCCC--cEEEEeCCCCCChhhcCHHHHHHHHHHHHHHh
Confidence 47777776 99999999999999999999999999999864
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=254.28 Aligned_cols=256 Identities=12% Similarity=0.036 Sum_probs=169.5
Q ss_pred ceeecCCceeEEEEc--cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~--g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
.++..+|.+++|... | +++|+|||+||++.+...|... ...++++|+||++|+||||.|+.+ ...|
T Consensus 7 ~~~~~~g~~l~y~~~~~G-~~~p~vvllHG~~~~~~~w~~~-------~~~L~~~~rvia~DlrGhG~S~~~----~~~~ 74 (276)
T 2wj6_A 7 HETLVFDNKLSYIDNQRD-TDGPAILLLPGWCHDHRVYKYL-------IQELDADFRVIVPNWRGHGLSPSE----VPDF 74 (276)
T ss_dssp EEEEETTEEEEEEECCCC-CSSCEEEEECCTTCCGGGGHHH-------HHHHTTTSCEEEECCTTCSSSCCC----CCCC
T ss_pred eEEeeCCeEEEEEEecCC-CCCCeEEEECCCCCcHHHHHHH-------HHHHhcCCEEEEeCCCCCCCCCCC----CCCC
Confidence 356678899999998 7 4568999999999998766432 355677899999999999999754 2358
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccch
Q 018947 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (348)
+++++++|+.++++++++++++|+||||||.+++.+|.++ |++|+++|++++........... ..........+..
T Consensus 75 ~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 151 (276)
T 2wj6_A 75 GYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAK---SLTLLKDPERWRE 151 (276)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHH---HHHHHHCTTTHHH
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHH---HhhhccCcchHHH
Confidence 9999999999999999999999999999999999999999 99999999999765332221110 0000000000000
Q ss_pred hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHH----HcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA----INGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
. .......++.... .+...+.+...........+...... +....+....+.++++|+++++|..|..
T Consensus 152 ~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~ 223 (276)
T 2wj6_A 152 G-THGLFDVWLDGHD-------EKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPT 223 (276)
T ss_dssp H-HHHHHHHHHTTBC-------CHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSC
T ss_pred H-HHHHHHHhhcccc-------hHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCcc
Confidence 0 1122222222110 22222222221111111111111100 0000123456778999999887644332
Q ss_pred C----chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 256 H----SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 256 ~----~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
. .....+++.+++ +++++++++||++++|+|++|++.|.+||++.+
T Consensus 224 ~~~~~~~~~~~~~~~p~--a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~~ 273 (276)
T 2wj6_A 224 EPEYEKINSDFAEQHPW--FSYAKLGGPTHFPAIDVPDRAAVHIREFATAIR 273 (276)
T ss_dssp SHHHHHHHHHHHHHCTT--EEEEECCCSSSCHHHHSHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHhhCCC--eEEEEeCCCCCcccccCHHHHHHHHHHHHhhcc
Confidence 2 123456777776 999999999999999999999999999998764
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=247.37 Aligned_cols=257 Identities=12% Similarity=0.120 Sum_probs=170.4
Q ss_pred eeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHH
Q 018947 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 103 (348)
++..+|.+++|..+| ++++|||+||++++...|.. .+..+.++||+|+++|+||||.|+.+ ...++++
T Consensus 3 ~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~w~~------~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~ 70 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWG--SGKPVLFSHGWLLDADMWEY------QMEYLSSRGYRTIAFDRRGFGRSDQP----WTGNDYD 70 (271)
T ss_dssp EECTTSCEEEEEEES--SSSEEEEECCTTCCGGGGHH------HHHHHHTTTCEEEEECCTTSTTSCCC----SSCCSHH
T ss_pred EEcCCCCEEEEEccC--CCCeEEEECCCCCcHHHHHH------HHHHHHhCCceEEEecCCCCccCCCC----CCCCCHH
Confidence 455688899999999 57889999999999876542 33456677999999999999999754 2357999
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCC--------ChHHHHHHHHHHHHHHh
Q 018947 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAP--------SWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~ 174 (348)
++++|+.+++++++.++++++||||||.+++.+++++ |++|+++|++++..... .................
T Consensus 71 ~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (271)
T 3ia2_A 71 TFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKD 150 (271)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999777776665 99999999998754321 00000000000000000
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
..... ..+...++...... .........................+..+.. .+....+.++++|+|+|+|++|.
T Consensus 151 --~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~Lvi~G~~D~ 223 (271)
T 3ia2_A 151 --RAQFI-SDFNAPFYGINKGQ---VVSQGVQTQTLQIALLASLKATVDCVTAFAE-TDFRPDMAKIDVPTLVIHGDGDQ 223 (271)
T ss_dssp --HHHHH-HHHHHHHHTGGGTC---CCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CBCHHHHTTCCSCEEEEEETTCS
T ss_pred --HHHHH-HHhhHhhhcccccc---ccCHHHHHHHHhhhhhccHHHHHHHHHHhhc-cCCcccccCCCCCEEEEEeCCCC
Confidence 00000 11111122211100 0022222222222111222222233332222 35667788999999999999999
Q ss_pred CCch---HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 255 FHSE---AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 255 ~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+++. .+.+.+.+++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 224 ~~p~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 224 IVPFETTGKVAAELIKG--AELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp SSCGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred cCChHHHHHHHHHhCCC--ceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 9842 2335566666 9999999999999999999999999999964
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=248.54 Aligned_cols=257 Identities=13% Similarity=0.161 Sum_probs=171.8
Q ss_pred cCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH
Q 018947 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (348)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (348)
.+|.+++|..+|++++|+|||+||++++...|. ..+..+..+||+|+++|+||||.|+.+ ...+++++++
T Consensus 7 ~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~------~~~~~L~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~~ 76 (276)
T 1zoi_A 7 KDGVQIFYKDWGPRDAPVIHFHHGWPLSADDWD------AQLLFFLAHGYRVVAHDRRGHGRSSQV----WDGHDMDHYA 76 (276)
T ss_dssp TTSCEEEEEEESCTTSCEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHHH
T ss_pred CCCcEEEEEecCCCCCCeEEEECCCCcchhHHH------HHHHHHHhCCCEEEEecCCCCCCCCCC----CCCCCHHHHH
Confidence 467799999999767889999999999887653 233456667999999999999999743 2358999999
Q ss_pred HHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCC--------ChHHHHHHHHHHHHHHhhcc
Q 018947 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAP--------SWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 107 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 177 (348)
+|+.+++++++.++++|+||||||.+++.+|+++ |++|+++|++++..... ....... ..+...... ..
T Consensus 77 ~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 154 (276)
T 1zoi_A 77 DDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVF-DGFQAQVAS-NR 154 (276)
T ss_dssp HHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHH-HHHHHHHHH-CH
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHH-HHHHHHHHH-hH
Confidence 9999999999999999999999999999999887 99999999999754211 0000000 000000000 00
Q ss_pred chhHHHHHHH-hhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC
Q 018947 178 CGVVKELLLK-RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (348)
Q Consensus 178 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~ 256 (348)
.... ..+.. .++...... ........+.+...............+..+.. .+..+.+.++++|+|+|+|++|.++
T Consensus 155 ~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~~~ 230 (276)
T 1zoi_A 155 AQFY-RDVPAGPFYGYNRPG--VEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQ-TDFTEDLKGIQQPVLVMHGDDDQIV 230 (276)
T ss_dssp HHHH-HHHHHTTTTTTTSTT--CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHS-CCCHHHHHHCCSCEEEEEETTCSSS
T ss_pred HHHH-HHhhhcccccccccc--ccccHHHHHHHHhhhhhhhHHHHHHHHHHhcc-cchhhhccccCCCEEEEEcCCCccc
Confidence 0011 11111 111111000 00122333332222111122222222222222 4566778899999999999999988
Q ss_pred c---hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 257 S---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 257 ~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+ ....+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 231 ~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 276 (276)
T 1zoi_A 231 PYENSGVLSAKLLPN--GALKTYKGYPHGMPTTHADVINADLLAFIRS 276 (276)
T ss_dssp CSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred ChHHHHHHHHhhCCC--ceEEEcCCCCCchhhhCHHHHHHHHHHHhcC
Confidence 3 23446667776 9999999999999999999999999999963
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=253.05 Aligned_cols=257 Identities=16% Similarity=0.219 Sum_probs=172.9
Q ss_pred cceeecC--C---ceeEEEEccCCCCCeEEEeCCCC---CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 22 DNLIKTS--H---GSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 22 ~~~v~~~--~---~~l~~~~~g~~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
..+++++ | .+++|...| ++++|||+||++ .+...|. ..+...+.++|+||++|+||||.|+.+.
T Consensus 10 ~~~~~~~~~g~~~~~l~y~~~G--~g~~vvllHG~~~~~~~~~~w~------~~~~~~L~~~~~vi~~D~~G~G~S~~~~ 81 (286)
T 2puj_A 10 SKFVKINEKGFSDFNIHYNEAG--NGETVIMLHGGGPGAGGWSNYY------RNVGPFVDAGYRVILKDSPGFNKSDAVV 81 (286)
T ss_dssp EEEEEECSTTCSSEEEEEEEEC--CSSEEEEECCCSTTCCHHHHHT------TTHHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred ceEEEecCCCcceEEEEEEecC--CCCcEEEECCCCCCCCcHHHHH------HHHHHHHhccCEEEEECCCCCCCCCCCC
Confidence 4567777 7 899999998 468999999997 5544432 2221445567999999999999998542
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC-----hHHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-----WTEWLYNKVM 168 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-----~~~~~~~~~~ 168 (348)
...++++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++...... ..... ...
T Consensus 82 ---~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~ 156 (286)
T 2puj_A 82 ---MDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGI--KLL 156 (286)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHH--HHH
T ss_pred ---CcCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhH--HHH
Confidence 12589999999999999999999999999999999999999999999999999998764221 10111 111
Q ss_pred HHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHc----CCccHHhhhccCCcc
Q 018947 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN----GRPDISEGLRKLQCR 244 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~P 244 (348)
...+.. ...... ...+..++...... ..+......... ...+.........+. ...+..+.+.++++|
T Consensus 157 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 228 (286)
T 2puj_A 157 FKLYAE-PSYETL-KQMLQVFLYDQSLI-----TEELLQGRWEAI-QRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAK 228 (286)
T ss_dssp HHHHHS-CCHHHH-HHHHHHHCSCGGGC-----CHHHHHHHHHHH-HHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSC
T ss_pred HHHhhC-CcHHHH-HHHHHHHhcCCccC-----CHHHHHHHHHHh-hcCHHHHHHHHHHHhhhhccccchhhHHhhcCCC
Confidence 111110 000111 12222222111100 222222211111 112222222222111 112345678899999
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+|+|+|++|.+++ ..+.+++.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 229 ~Lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 229 TFITWGRDDRFVPLDHGLKLLWNIDD--ARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHSSS--EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCccCHHHHHHHHHHCCC--CeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 9999999999883 45568888887 8999999999999999999999999999974
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=252.14 Aligned_cols=255 Identities=11% Similarity=0.108 Sum_probs=172.8
Q ss_pred cCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH
Q 018947 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (348)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (348)
.+|.+++|..+| ++++|||+||++++...|. ..+..+.++||+|+++|+||||.|+.+ ...+++++++
T Consensus 10 ~~g~~l~y~~~g--~g~pvvllHG~~~~~~~~~------~~~~~L~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~a 77 (277)
T 1brt_A 10 STSIDLYYEDHG--TGQPVVLIHGFPLSGHSWE------RQSAALLDAGYRVITYDRRGFGQSSQP----TTGYDYDTFA 77 (277)
T ss_dssp TEEEEEEEEEEC--SSSEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHHH
T ss_pred CCCcEEEEEEcC--CCCeEEEECCCCCcHHHHH------HHHHHHhhCCCEEEEeCCCCCCCCCCC----CCCccHHHHH
Confidence 466789999988 5678999999999887653 233455567999999999999999754 2458999999
Q ss_pred HHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCC-CcceEEEecCCCCCCC---------hHHHHHHHHHHHHHHhhc
Q 018947 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPS---------WTEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 107 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 176 (348)
+|+.+++++++.++++|+||||||.+++.+|.++|+ +|+++|++++...... ...... ..+...... .
T Consensus 78 ~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~ 155 (277)
T 1brt_A 78 ADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFF-DGIVAAVKA-D 155 (277)
T ss_dssp HHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHH-HHHHHHHHH-C
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHH-HHHHHHHhc-C
Confidence 999999999999999999999999999999999999 9999999997543110 000000 001110000 0
Q ss_pred cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC
Q 018947 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~ 256 (348)
..... ......++....... ....++..+.+...............+..+ ..+..+.+.++++|+|+|+|++|.++
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~ 231 (277)
T 1brt_A 156 RYAFY-TGFFNDFYNLDENLG-TRISEEAVRNSWNTAASGGFFAAAAAPTTW--YTDFRADIPRIDVPALILHGTGDRTL 231 (277)
T ss_dssp HHHHH-HHHHHHHTTHHHHBT-TTBCHHHHHHHHHHHHHSCHHHHHHGGGGT--TCCCTTTGGGCCSCEEEEEETTCSSS
T ss_pred chhhH-HHHHHHHhhcccccc-ccCCHHHHHHHHHHHhccchHHHHHHHHHH--hccchhhcccCCCCeEEEecCCCccC
Confidence 00111 112222222110000 000233333333322222222222222222 23555678899999999999999988
Q ss_pred c--hH-HHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 257 S--EA-VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 257 ~--~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+ .. ..+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 232 ~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 232 PIENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp CGGGTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHCCC--CcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 3 34 678888887 8999999999999999999999999999963
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=247.75 Aligned_cols=253 Identities=12% Similarity=0.114 Sum_probs=181.9
Q ss_pred eeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHH
Q 018947 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 103 (348)
++++++.+++|...|++++|+|||+||++++...|... ...+.++|+|+++|+||||.|..+ ...++++
T Consensus 3 ~~~~~g~~l~~~~~g~~~~~~vv~lHG~~~~~~~~~~~-------~~~L~~~~~v~~~D~~G~G~S~~~----~~~~~~~ 71 (264)
T 3ibt_A 3 SLNVNGTLMTYSESGDPHAPTLFLLSGWCQDHRLFKNL-------APLLARDFHVICPDWRGHDAKQTD----SGDFDSQ 71 (264)
T ss_dssp CCEETTEECCEEEESCSSSCEEEEECCTTCCGGGGTTH-------HHHHTTTSEEEEECCTTCSTTCCC----CSCCCHH
T ss_pred eEeeCCeEEEEEEeCCCCCCeEEEEcCCCCcHhHHHHH-------HHHHHhcCcEEEEccccCCCCCCC----ccccCHH
Confidence 46678999999999987899999999999998765422 355677899999999999999854 3568999
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHH
Q 018947 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (348)
++++|+.+++++++.++++++||||||.+++.+|.++ |++|+++|++++.. ........ .+............ .
T Consensus 72 ~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~~~~~~---~~~~~~~~~~~~~~-~ 146 (264)
T 3ibt_A 72 TLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPHPGFWQ---QLAEGQHPTEYVAG-R 146 (264)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCCHHHHH---HHHHTTCTTTHHHH-H
T ss_pred HHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcChhhcc---hhhcccChhhHHHH-H
Confidence 9999999999999999999999999999999999999 99999999999988 32221111 11111001111111 1
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcC----CccHHhhhccCCccEEEEecCCCCCC--
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING----RPDISEGLRKLQCRSLIFVGESSPFH-- 256 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~Pvl~i~g~~D~~~-- 256 (348)
......++.... .+...+.+...+.......+......+.. ..+....+.++++|+++++|..|...
T Consensus 147 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~ 219 (264)
T 3ibt_A 147 QSFFDEWAETTD-------NADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQD 219 (264)
T ss_dssp HHHHHHHHTTCC-------CHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHH
T ss_pred HHHHHHhcccCC-------cHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchh
Confidence 333444544332 55666666665554443333333322211 12334678899999999976444333
Q ss_pred --chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 257 --SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.....+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 220 ~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (264)
T 3ibt_A 220 YRQLQLEFAAGHSW--FHPRHIPGRTHFPSLENPVAVAQAIREFLQA 264 (264)
T ss_dssp HHHHHHHHHHHCTT--EEEEECCCSSSCHHHHCHHHHHHHHHHHTC-
T ss_pred hHHHHHHHHHhCCC--ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 234557777776 8999999999999999999999999999863
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=244.36 Aligned_cols=258 Identities=12% Similarity=0.134 Sum_probs=170.4
Q ss_pred ecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHH
Q 018947 26 KTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (348)
Q Consensus 26 ~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (348)
..+|.+++|..+|++++++|||+||++.+...|. ..+..+..+||+|+++|+||||.|+.+ ...++++++
T Consensus 5 ~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~------~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~ 74 (275)
T 1a88_A 5 TSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWD------NQMLFFLSHGYRVIAHDRRGHGRSDQP----STGHDMDTY 74 (275)
T ss_dssp CTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHH
T ss_pred ccCCCEEEEEEcCCCCCceEEEECCCCCchhhHH------HHHHHHHHCCceEEEEcCCcCCCCCCC----CCCCCHHHH
Confidence 3467799999999777889999999998887653 223455667899999999999999744 235899999
Q ss_pred HHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCC--------ChHHHHHHHHHHHHHHhhc
Q 018947 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAP--------SWTEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 106 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 176 (348)
++|+.+++++++.++++++||||||.+++.+++++ |++|+++|++++..... ....... ..+...... .
T Consensus 75 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~ 152 (275)
T 1a88_A 75 AADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVF-DEFRAALAA-N 152 (275)
T ss_dssp HHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHH-HHHHHHHHH-C
T ss_pred HHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHH-HHHHHHHhh-h
Confidence 99999999999999999999999999999988887 99999999999754221 0000000 000000000 0
Q ss_pred cchhHHHHHHH-hhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 177 MCGVVKELLLK-RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 177 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
..... ..+.. .++...... ........+.+...............+..+.. .+....+.++++|+|+|+|++|.+
T Consensus 153 ~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~ 228 (275)
T 1a88_A 153 RAQFY-IDVPSGPFYGFNREG--ATVSQGLIDHWWLQGMMGAANAHYECIAAFSE-TDFTDDLKRIDVPVLVAHGTDDQV 228 (275)
T ss_dssp HHHHH-HHHHHTTTTTTTSTT--CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHHCCSCEEEEEETTCSS
T ss_pred HHHHH-HhhhccccccccCcc--cccCHHHHHHHHHHhhhcchHhHHHHHhhhhh-cccccccccCCCCEEEEecCCCcc
Confidence 00001 11111 111111000 00123333332221111111122222222211 345567888999999999999998
Q ss_pred Cc---hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 256 HS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 256 ~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++ ....+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 229 ~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 229 VPYADAAPKSAELLAN--ATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp SCSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHhhCCC--cEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 83 22345666766 9999999999999999999999999999963
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=248.10 Aligned_cols=249 Identities=15% Similarity=0.154 Sum_probs=168.1
Q ss_pred EEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 018947 33 SVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV 112 (348)
Q Consensus 33 ~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~ 112 (348)
+|...|+ ++|+|||+||++++...|... ...+.++|+|+++|+||||.|+.+.......++++++++|+.++
T Consensus 12 ~~~~~G~-g~~~vvllHG~~~~~~~w~~~-------~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~ 83 (271)
T 1wom_A 12 HVKVKGS-GKASIMFAPGFGCDQSVWNAV-------APAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDV 83 (271)
T ss_dssp TCEEEEC-CSSEEEEECCTTCCGGGGTTT-------GGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHH
T ss_pred eeEeecC-CCCcEEEEcCCCCchhhHHHH-------HHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHH
Confidence 4556673 458999999999988765432 25566789999999999999975421112346899999999999
Q ss_pred HHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC--------hHHHHHHHHHHHHHHhhccchhHHHH
Q 018947 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLYYYGMCGVVKEL 184 (348)
Q Consensus 113 l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (348)
+++++.++++++||||||.+++.+|.++|++|+++|++++...... ........ ....+.. ...... ..
T Consensus 84 l~~l~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~-~~ 160 (271)
T 1wom_A 84 CEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLG-LLEMMEK-NYIGWA-TV 160 (271)
T ss_dssp HHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHH-HHHHHHH-CHHHHH-HH
T ss_pred HHHcCCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHH-HHHHHhh-hHHHHH-HH
Confidence 9999999999999999999999999999999999999998643210 00000000 0000000 000000 11
Q ss_pred HHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHH
Q 018947 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHM 262 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~ 262 (348)
+....+.... .++..+.+...+....+............ .+....+.++++|+++|+|++|.+++ ..+.+
T Consensus 161 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~ 232 (271)
T 1wom_A 161 FAATVLNQPD-------RPEIKEELESRFCSTDPVIARQFAKAAFF-SDHREDLSKVTVPSLILQCADDIIAPATVGKYM 232 (271)
T ss_dssp HHHHHHCCTT-------CHHHHHHHHHHHHHSCHHHHHHHHHHHHS-CCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHH
T ss_pred HHHHHhcCCC-------chHHHHHHHHHHhcCCcHHHHHHHHHHhC-cchHHhccccCCCEEEEEcCCCCcCCHHHHHHH
Confidence 1111111110 33344444443333333322222222222 35566788999999999999999883 44567
Q ss_pred HHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 263 TSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 263 ~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.+++ +++++++++||++++|+|+++++.|.+||++.
T Consensus 233 ~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 233 HQHLPY--SSLKQMEARGHCPHMSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp HHHSSS--EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHCCC--CEEEEeCCCCcCccccCHHHHHHHHHHHHHhc
Confidence 788887 89999999999999999999999999999764
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=247.35 Aligned_cols=267 Identities=13% Similarity=0.140 Sum_probs=170.9
Q ss_pred ccceeecCCceeEEEEccCCCC-CeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDK-PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~-p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
++.++..+|.+++|...|++.+ ++|||+||++++...|+..+ ..++.+||+|+++|+||||.|+.+. ...
T Consensus 6 ~~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~------~~l~~~g~~vi~~D~~G~G~S~~~~---~~~ 76 (293)
T 1mtz_A 6 IENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSL------RDMTKEGITVLFYDQFGCGRSEEPD---QSK 76 (293)
T ss_dssp EEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGG------GGGGGGTEEEEEECCTTSTTSCCCC---GGG
T ss_pred cceEEEECCEEEEEEEECCCCCCCeEEEEeCCCCcchhHHHHH------HHHHhcCcEEEEecCCCCccCCCCC---CCc
Confidence 4567788999999999996444 78999999876655554333 4566778999999999999997542 234
Q ss_pred CCHHHHHHHHHHHHHHc-CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH------HHHHH
Q 018947 100 LSVDDLADQIAEVLNHF-GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV------MSNLL 172 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~ 172 (348)
++++++++|+.++++++ +.++++|+||||||.+++.+|.++|++|+++|++++......+........ ....+
T Consensus 77 ~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (293)
T 1mtz_A 77 FTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAI 156 (293)
T ss_dssp CSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHH
Confidence 89999999999999999 999999999999999999999999999999999998765321111100000 00000
Q ss_pred H----hhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHH-------HHcCCccHHhhhccC
Q 018947 173 Y----YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLE-------AINGRPDISEGLRKL 241 (348)
Q Consensus 173 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~i 241 (348)
. ...............++....... ..........+..... . ..+..... ......+..+.+.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 232 (293)
T 1mtz_A 157 KKYGSSGSYENPEYQEAVNYFYHQHLLRS-EDWPPEVLKSLEYAER--R-NVYRIMNGPNEFTITGTIKDWDITDKISAI 232 (293)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHHHTSCS-SCCCHHHHHHHHHHHH--S-SHHHHHTCSBTTBCCSTTTTCBCTTTGGGC
T ss_pred HHhhccCCcChHHHHHHHHHHHHhhcccc-cCchHHHHHhHhhhcc--c-hhhhhccCcceecccccccCCChhhhhccC
Confidence 0 000000000000011111000000 0001111111110000 0 00000000 000112345567889
Q ss_pred CccEEEEecCCCCCC-chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 242 QCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 242 ~~Pvl~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++|+|+|+|++|.+. ...+.+.+.+++ +++++++++||++++|+|+++++.|.+||++.
T Consensus 233 ~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 233 KIPTLITVGEYDEVTPNVARVIHEKIAG--SELHVFRDCSHLTMWEDREGYNKLLSDFILKH 292 (293)
T ss_dssp CSCEEEEEETTCSSCHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeeCCCCCCHHHHHHHHHhCCC--ceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 999999999999544 345567788876 89999999999999999999999999999764
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=248.51 Aligned_cols=262 Identities=16% Similarity=0.185 Sum_probs=173.0
Q ss_pred cceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhh-hhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~-~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
..++..+|.+++|...|++++|+|||+||++++...|. ..+ ..+..+||+||++|+||||.|+... .....+
T Consensus 3 ~~~~~~~g~~l~y~~~G~~~~~~vvllHG~~~~~~~w~------~~~~~~L~~~G~~vi~~D~rG~G~S~~~~-~~~~~~ 75 (298)
T 1q0r_A 3 ERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWP------DEFARRLADGGLHVIRYDHRDTGRSTTRD-FAAHPY 75 (298)
T ss_dssp EEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGSC------HHHHHHHHTTTCEEEEECCTTSTTSCCCC-TTTSCC
T ss_pred CceeccCCeEEEEEeccCCCCCeEEEEcCCCCCccchH------HHHHHHHHhCCCEEEeeCCCCCCCCCCCC-CCcCCc
Confidence 45677888999999999777899999999999886553 222 3455668999999999999998521 112458
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCC-CCCChHH---------------HHH
Q 018947 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC-KAPSWTE---------------WLY 164 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~-~~~~~~~---------------~~~ 164 (348)
+++++++|+.++++++++++++++||||||.+++.+|.++|++|+++|++++.. ....... ...
T Consensus 76 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (298)
T 1q0r_A 76 GFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQ 155 (298)
T ss_dssp CHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhccccccc
Confidence 999999999999999999999999999999999999999999999999999876 2110000 000
Q ss_pred HHHHHHHHHhh----ccchhHHHHHHH--hhhcccccCCCCCCChHH-HHHHHHHHhhh-chhhH-HHHHHHHcCCccHH
Q 018947 165 NKVMSNLLYYY----GMCGVVKELLLK--RYFSKEVRGNAQVPESDI-VQACRRLLDER-QSSNV-WHFLEAINGRPDIS 235 (348)
Q Consensus 165 ~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~ 235 (348)
...+....... ...... ..... ..+...... . ..+. .+.+...+... ..... ...+. .....+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 229 (298)
T 1q0r_A 156 QPFLDALALMNQPAEGRAAEV-AKRVSKWRILSGTGVP---F-DDAEYARWEERAIDHAGGVLAEPYAHYS-LTLPPPSR 229 (298)
T ss_dssp HHHHHHHHHHHSCCCSHHHHH-HHHHHHHHHHHCSSSC---C-CHHHHHHHHHHHHHHTTTCCSCCCGGGG-CCCCCGGG
T ss_pred HHHHHHHhccCcccccHHHHH-HHHHHhhhhccCCCCC---C-CHHHHHHHHHHHhhccCCccchhhhhhh-hhcCcccc
Confidence 00000111000 000000 11111 011000000 0 2222 22222222111 11111 11111 11223555
Q ss_pred hh-hccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 236 EG-LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 236 ~~-l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.. +.++++|+|+|+|++|.++ ...+.+++.+++ +++++++++|| |.|+++++.|.+||++.
T Consensus 230 ~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 230 AAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT--ARLAEIPGMGH----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp GGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTT--EEEEEETTCCS----SCCGGGHHHHHHHHHHH
T ss_pred cccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCC--CEEEEcCCCCC----CCcHHHHHHHHHHHHHH
Confidence 66 8899999999999999988 356678888887 89999999999 88999999999999875
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=245.01 Aligned_cols=256 Identities=14% Similarity=0.169 Sum_probs=168.1
Q ss_pred ecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHH
Q 018947 26 KTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (348)
Q Consensus 26 ~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (348)
..+|.+++|..+| ++++|||+||++++...|. ..+..+..+||+|+++|+||||.|+.+ ...++++++
T Consensus 5 ~~~g~~l~y~~~g--~~~~vvllHG~~~~~~~~~------~~~~~L~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~ 72 (273)
T 1a8s_A 5 TRDGTQIYYKDWG--SGQPIVFSHGWPLNADSWE------SQMIFLAAQGYRVIAHDRRGHGRSSQP----WSGNDMDTY 72 (273)
T ss_dssp CTTSCEEEEEEES--CSSEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHH
T ss_pred cCCCcEEEEEEcC--CCCEEEEECCCCCcHHHHh------hHHhhHhhCCcEEEEECCCCCCCCCCC----CCCCCHHHH
Confidence 3467789999988 5789999999999887653 223456667999999999999999754 235899999
Q ss_pred HHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCC--------ChHHHHHHHHHHHHHHhhc
Q 018947 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAP--------SWTEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 106 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 176 (348)
++|+.+++++++.++++|+||||||.+++.+++++ |++|+++|++++..... ....... ..+.......
T Consensus 73 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 150 (273)
T 1a8s_A 73 ADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVF-DGIRQASLAD- 150 (273)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH-HHHHHHHHHH-
T ss_pred HHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHH-HHHHHHhHhh-
Confidence 99999999999999999999999999999988876 99999999999754211 0000000 0000000000
Q ss_pred cchhHHHHHHH-hhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 177 MCGVVKELLLK-RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 177 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
..... ..+.. .++...... ........+.+...............+..+.. .+..+.+.++++|+|+|+|++|.+
T Consensus 151 ~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~ 226 (273)
T 1a8s_A 151 RSQLY-KDLASGPFFGFNQPG--AKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSE-TDFTEDLKKIDVPTLVVHGDADQV 226 (273)
T ss_dssp HHHHH-HHHHHTTSSSTTSTT--CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHTCCSCEEEEEETTCSS
T ss_pred HHHHH-HHhhcccccCcCCcc--cccCHHHHHHHHHhccccchhHHHHHHHHHhc-cChhhhhhcCCCCEEEEECCCCcc
Confidence 00000 11111 111111000 00122333332221111121222222222211 345567889999999999999998
Q ss_pred Cc---hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 256 HS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 256 ~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++ ....+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 227 ~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 227 VPIEASGIASAALVKG--STLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp SCSTTTHHHHHHHSTT--CEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHhCCC--cEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 83 23345666776 8999999999999999999999999999963
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-34 Score=240.75 Aligned_cols=256 Identities=13% Similarity=0.111 Sum_probs=168.5
Q ss_pred ecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHH
Q 018947 26 KTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (348)
Q Consensus 26 ~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (348)
..+|.+++|..+| ++++|||+||++++...|.. .+..+..+||+|+++|+||||.|..+ ...++++++
T Consensus 5 ~~~g~~l~y~~~g--~g~~vvllHG~~~~~~~w~~------~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~ 72 (274)
T 1a8q_A 5 TRDGVEIFYKDWG--QGRPVVFIHGWPLNGDAWQD------QLKAVVDAGYRGIAHDRRGHGHSTPV----WDGYDFDTF 72 (274)
T ss_dssp CTTSCEEEEEEEC--SSSEEEEECCTTCCGGGGHH------HHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHH
T ss_pred ccCCCEEEEEecC--CCceEEEECCCcchHHHHHH------HHHHHHhCCCeEEEEcCCCCCCCCCC----CCCCcHHHH
Confidence 3467789999988 67899999999998876532 23455667899999999999999743 235899999
Q ss_pred HHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCC--------ChHHHHHHHHHHHHHHhhc
Q 018947 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAP--------SWTEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 106 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 176 (348)
++|+.+++++++.++++++||||||.+++.+|+++ |++|+++|++++..... ....... ..+.......
T Consensus 73 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 150 (274)
T 1a8q_A 73 ADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVF-DALKNGVLTE- 150 (274)
T ss_dssp HHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH-HHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHH-HHHHHHhhcc-
Confidence 99999999999999999999999999999988876 99999999999754210 0000000 0000000000
Q ss_pred cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC
Q 018947 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~ 256 (348)
..... ..+...++...... ........+.+...............+..+.. .+..+.+.++++|+|+|+|++|.++
T Consensus 151 ~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~ 226 (274)
T 1a8q_A 151 RSQFW-KDTAEGFFSANRPG--NKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGY-TDFTEDLKKFDIPTLVVHGDDDQVV 226 (274)
T ss_dssp HHHHH-HHHHHHHTTTTSTT--CCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHH-CCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred HHHHH-HHhccccccccccc--ccccHHHHHHHHHHhhhcChHHHHHHHhhhhc-CcHHHHhhcCCCCEEEEecCcCCCC
Confidence 00000 11111122211000 00122333332222111111222222222211 3456678899999999999999988
Q ss_pred ch--H-HHHHHhhccCCcEEEEecCCCCCcccc--ChhhhHHHHHHHHhh
Q 018947 257 SE--A-VHMTSKIDRRYSALVEVQACGSMVTEE--QPHAMLIPMEYFLMG 301 (348)
Q Consensus 257 ~~--~-~~~~~~~~~~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~ 301 (348)
+. . ..+.+.+++ +++++++++||++++| +|+++++.|.+||++
T Consensus 227 ~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~~ 274 (274)
T 1a8q_A 227 PIDATGRKSAQIIPN--AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp CGGGTHHHHHHHSTT--CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHhhCCC--ceEEEECCCCCceecccCCHHHHHHHHHHHhcC
Confidence 42 2 345666666 9999999999999999 999999999999963
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=246.10 Aligned_cols=268 Identities=29% Similarity=0.515 Sum_probs=183.7
Q ss_pred ccceeecCCceeEEEEccCC--CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~--~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
..+.+.+++.+++|...|++ ++|+|||+||++++...++... |.......+.++|+|+++|+||||.|....+....
T Consensus 12 ~~~~~~~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~ 90 (286)
T 2qmq_A 12 HTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPL-FRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQ 90 (286)
T ss_dssp EEEEEEETTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHH-HTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCC
T ss_pred cccccccCCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhh-hhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCC
Confidence 34567789999999999965 6899999999999987533321 11002355667899999999999988654332222
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccc
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (348)
.++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++.........+..... .....
T Consensus 91 ~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~ 164 (286)
T 2qmq_A 91 YPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKL------TGLTS 164 (286)
T ss_dssp CCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHH------HHTTS
T ss_pred ccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhh------ccccc
Confidence 259999999999999999999999999999999999999999999999999999876655443322111 01111
Q ss_pred hhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcCCcc---HHhhhccCCccEEEEecCCCC
Q 018947 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPD---ISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
.. .......++....... .++..+.+....... .......+...+....+ ....+.++++|+|+|+|++|.
T Consensus 165 ~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 239 (286)
T 2qmq_A 165 SI-PDMILGHLFSQEELSG----NSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAP 239 (286)
T ss_dssp CH-HHHHHHHHSCHHHHHT----TCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTST
T ss_pred cc-hHHHHHHHhcCCCCCc----chHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCc
Confidence 11 2333444444332111 234444444443322 22222233332222112 235678899999999999999
Q ss_pred CCchHHH-HHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 255 FHSEAVH-MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 255 ~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+++...+ +.+.++ +++++++++++||++++|+|+++++.|.+||++
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 286 (286)
T 2qmq_A 240 HEDAVVECNSKLDP-TQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQG 286 (286)
T ss_dssp THHHHHHHHHHSCG-GGEEEEEETTCTTCHHHHCHHHHHHHHHHHHCC
T ss_pred cccHHHHHHHHhcC-CCceEEEeCCCCCcccccChHHHHHHHHHHhcC
Confidence 9853333 444444 138999999999999999999999999999963
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=243.01 Aligned_cols=263 Identities=14% Similarity=0.087 Sum_probs=172.4
Q ss_pred CCCccceeecCCceeEEEEccCCCCCeEEEeCCCC---CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
+..+..++..++.+++|...|+++.|+|||+||++ .+...|.. . ...+.++|+|+++|+||||.|..+.
T Consensus 5 ~~~~~~~~~~~g~~l~y~~~g~~g~p~vvllHG~~~~~~~~~~~~~------~-~~~L~~~~~vi~~D~~G~G~S~~~~- 76 (285)
T 1c4x_A 5 VEIIEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRP------I-IPDLAENFFVVAPDLIGFGQSEYPE- 76 (285)
T ss_dssp CCCEEEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGG------G-HHHHHTTSEEEEECCTTSTTSCCCS-
T ss_pred ccccceEEEECCEEEEEEecCCCCCCEEEEEeCCCCCCcchhhHHH------H-HHHHhhCcEEEEecCCCCCCCCCCC-
Confidence 34456678889999999999854445599999997 45444432 2 2445567999999999999997542
Q ss_pred CCCCCCCHHHH----HHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh-HHHHHHHHHH
Q 018947 95 DDEPVLSVDDL----ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-TEWLYNKVMS 169 (348)
Q Consensus 95 ~~~~~~~~~~~----~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~ 169 (348)
...++++++ ++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++....... .... ....
T Consensus 77 --~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~ 152 (285)
T 1c4x_A 77 --TYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPEL--ARLL 152 (285)
T ss_dssp --SCCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHH--HHHH
T ss_pred --CcccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhH--HHHH
Confidence 125899999 999999999999999999999999999999999999999999999987643211 1110 0110
Q ss_pred HHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHH---cCC----ccHHhhhccCC
Q 018947 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI---NGR----PDISEGLRKLQ 242 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~l~~i~ 242 (348)
..+. ....... ...+..++...... ....+......... ..+.........+ ... .+....+.+++
T Consensus 153 ~~~~-~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 225 (285)
T 1c4x_A 153 AFYA-DPRLTPY-RELIHSFVYDPENF---PGMEEIVKSRFEVA--NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLP 225 (285)
T ss_dssp TGGG-SCCHHHH-HHHHHTTSSCSTTC---TTHHHHHHHHHHHH--HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCC
T ss_pred HHhc-cccHHHH-HHHHHHhhcCcccc---cCcHHHHHHHHHhc--cCHHHHHHHHHHhccccccccccccchhhhccCC
Confidence 0000 0000011 11122111111000 00112222111111 1111111111111 011 11335678899
Q ss_pred ccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 243 CRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 243 ~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+|+|+|+|++|.+++ ..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 226 ~P~lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 226 HDVLVFHGRQDRIVPLDTSLYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp SCEEEEEETTCSSSCTHHHHHHHHHCSS--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred CCEEEEEeCCCeeeCHHHHHHHHHhCCC--ceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 999999999999983 45568888887 8999999999999999999999999999975
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=243.78 Aligned_cols=259 Identities=14% Similarity=0.106 Sum_probs=173.3
Q ss_pred CCccceeecCCceeEEEEccCCCCCeEEEeCCCC---CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC
Q 018947 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 19 ~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
.....++..+|.+++|...| .+++|||+||++ .+...|.. . ...+.++|+|+++|+||||.|. +.
T Consensus 15 ~~~~~~~~~~g~~l~y~~~g--~g~~vvllHG~~~~~~~~~~~~~-~------~~~L~~~~~vi~~Dl~G~G~S~-~~-- 82 (296)
T 1j1i_A 15 AYVERFVNAGGVETRYLEAG--KGQPVILIHGGGAGAESEGNWRN-V------IPILARHYRVIAMDMLGFGKTA-KP-- 82 (296)
T ss_dssp CCEEEEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHHHHHTT-T------HHHHTTTSEEEEECCTTSTTSC-CC--
T ss_pred CCcceEEEECCEEEEEEecC--CCCeEEEECCCCCCcchHHHHHH-H------HHHHhhcCEEEEECCCCCCCCC-CC--
Confidence 34566788899999999998 468999999997 55444432 2 3555667999999999999997 31
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCC-CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 96 DEPVLSVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
...++++++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++........... . .....
T Consensus 83 -~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~--~---~~~~~ 156 (296)
T 1j1i_A 83 -DIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDL--R---PIINY 156 (296)
T ss_dssp -SSCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC---------------C
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchH--H---HHhcc
Confidence 2358999999999999999998 899999999999999999999999999999999876432211100 0 00000
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhh-hchhhHHHHHHHH---cCCccHHhhhccCCccEEEEec
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLEAI---NGRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~l~~i~~Pvl~i~g 250 (348)
..........+..++..... ...+........... .....+...+... ....+....+.++++|+|+|+|
T Consensus 157 -~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G 230 (296)
T 1j1i_A 157 -DFTREGMVHLVKALTNDGFK-----IDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQG 230 (296)
T ss_dssp -CSCHHHHHHHHHHHSCTTCC-----CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEE
T ss_pred -cCCchHHHHHHHHhccCccc-----ccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEE
Confidence 00000001122222211110 022222222111110 0011111111111 1112344567889999999999
Q ss_pred CCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 251 ESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 251 ~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
++|.+++ ....+.+.+++ +++++++++||++++|+|+++++.|.+||++..
T Consensus 231 ~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 231 KDDKVVPVETAYKFLDLIDD--SWGYIIPHCGHWAMIEHPEDFANATLSFLSLRV 283 (296)
T ss_dssp TTCSSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC-
T ss_pred CCCcccCHHHHHHHHHHCCC--CEEEEECCCCCCchhcCHHHHHHHHHHHHhccC
Confidence 9999983 45567888876 899999999999999999999999999998763
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=246.06 Aligned_cols=259 Identities=12% Similarity=0.139 Sum_probs=175.4
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
++.++.+++++++|...| ++|+|||+||++++...|... ...+.+||+|+++|+||||.|..+. ....+
T Consensus 4 ~~~~~~~~~~~~~y~~~g--~~~~vv~~HG~~~~~~~~~~~-------~~~L~~~~~vi~~d~~G~G~s~~~~--~~~~~ 72 (278)
T 3oos_A 4 TTNIIKTPRGKFEYFLKG--EGPPLCVTHLYSEYNDNGNTF-------ANPFTDHYSVYLVNLKGCGNSDSAK--NDSEY 72 (278)
T ss_dssp EEEEEEETTEEEEEEEEC--SSSEEEECCSSEECCTTCCTT-------TGGGGGTSEEEEECCTTSTTSCCCS--SGGGG
T ss_pred ccCcEecCCceEEEEecC--CCCeEEEEcCCCcchHHHHHH-------HHHhhcCceEEEEcCCCCCCCCCCC--CcccC
Confidence 456888999999999998 678999999999988765322 2455569999999999999997542 23467
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC------------ChHHHHHHHHH
Q 018947 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP------------SWTEWLYNKVM 168 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~------------~~~~~~~~~~~ 168 (348)
+++++++|+.+++++++.++++++|||+||.+++.+|.++|++|+++|++++..... ....... ...
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 151 (278)
T 3oos_A 73 SMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRI-VSI 151 (278)
T ss_dssp SHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHH-HHH
T ss_pred cHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHH-HHH
Confidence 999999999999999999999999999999999999999999999999999887611 0000000 111
Q ss_pred HHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhh-hchhhHHHHHH-HHcCCccHHhhhccCCccEE
Q 018947 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE-RQSSNVWHFLE-AINGRPDISEGLRKLQCRSL 246 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvl 246 (348)
...+................+...... .++....+...... .........+. ......+....+.++++|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 225 (278)
T 3oos_A 152 MNALNDDSTVQEERKALSREWALMSFY------SEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSF 225 (278)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHHHCS------CHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEE
T ss_pred HHhhcccccCchHHHHHHHHHhhcccC------CcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEE
Confidence 111111111111111111111111110 11111111110000 00001112222 11122455677889999999
Q ss_pred EEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHH
Q 018947 247 IFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 299 (348)
Q Consensus 247 ~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 299 (348)
+|+|++|.+++ ....+.+.+++ +++++++++||++++++|+++++.|.+||
T Consensus 226 ~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 226 IYCGKHDVQCPYIFSCEIANLIPN--ATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp EEEETTCSSSCHHHHHHHHHHSTT--EEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred EEEeccCCCCCHHHHHHHHhhCCC--cEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 99999999883 45668888876 89999999999999999999999999985
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=240.88 Aligned_cols=241 Identities=14% Similarity=0.195 Sum_probs=160.9
Q ss_pred eeEEEEccCC---CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018947 31 SLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 31 ~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
+++|...|++ ++++|||+||++++...|.. . ...+.+.|+|+++|+||||.|..+ ..++++++++
T Consensus 2 ~l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~------~-~~~L~~~~~via~Dl~G~G~S~~~-----~~~~~~~~a~ 69 (255)
T 3bf7_A 2 KLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGV------L-ARDLVNDHNIIQVDVRNHGLSPRE-----PVMNYPAMAQ 69 (255)
T ss_dssp CCCEEEECCSSCCCCCCEEEECCTTCCTTTTHH------H-HHHHTTTSCEEEECCTTSTTSCCC-----SCCCHHHHHH
T ss_pred ceeeeecCccccCCCCCEEEEcCCcccHhHHHH------H-HHHHHhhCcEEEecCCCCCCCCCC-----CCcCHHHHHH
Confidence 4678888864 78899999999998866532 2 345566799999999999999743 2479999999
Q ss_pred HHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC---hHHHHHHHHHHHHHHhhccchhHHHH
Q 018947 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WTEWLYNKVMSNLLYYYGMCGVVKEL 184 (348)
Q Consensus 108 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (348)
|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.+.... ..... ..+... ....... ..
T Consensus 70 dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~--~~~~~~-~~~~~~~---~~ 143 (255)
T 3bf7_A 70 DLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIF--AAINAV-SESDAQT---RQ 143 (255)
T ss_dssp HHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHH--HHHHHH-HHSCCCS---HH
T ss_pred HHHHHHHHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHH--HHHHhc-ccccccc---HH
Confidence 999999999999999999999999999999999999999999986543211 11111 001000 0001100 00
Q ss_pred HHHhhhcccccCCCCCCChHHHHHHHHHHhh----hchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--ch
Q 018947 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDE----RQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 258 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~ 258 (348)
.....+.... ........+...+.. .........+..+... ..+.++++|+|+|+|++|.++ ..
T Consensus 144 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~i~~P~l~i~G~~D~~~~~~~ 213 (255)
T 3bf7_A 144 QAAAIMRQHL------NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGW----EKIPAWDHPALFIPGGNSPYVSEQY 213 (255)
T ss_dssp HHHHHHTTTC------CCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCC----CCCCCCCSCEEEECBTTCSTTCGGG
T ss_pred HHHHHHhhhc------chhHHHHHHHHhccCCceeecHHHHHhhhhhcccc----ccccccCCCeEEEECCCCCCCCHHH
Confidence 0111111100 011122211111000 0011111111111111 125688999999999999987 34
Q ss_pred HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 259 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.+.+.+.+++ +++++++++||+++.|+|+++++.|.+||++
T Consensus 214 ~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 214 RDDLLAQFPQ--ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp HHHHHHHCTT--EEECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCC--CeEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 5667888887 9999999999999999999999999999975
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=242.52 Aligned_cols=255 Identities=14% Similarity=0.150 Sum_probs=173.1
Q ss_pred cCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH
Q 018947 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (348)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (348)
.++.+++|...| ++++|||+||++++...|.. .+..+..+||+|+++|+||||.|+.+ ...+++++++
T Consensus 10 ~~g~~l~y~~~g--~~~pvvllHG~~~~~~~~~~------~~~~L~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~~ 77 (279)
T 1hkh_A 10 STPIELYYEDQG--SGQPVVLIHGYPLDGHSWER------QTRELLAQGYRVITYDRRGFGGSSKV----NTGYDYDTFA 77 (279)
T ss_dssp TEEEEEEEEEES--SSEEEEEECCTTCCGGGGHH------HHHHHHHTTEEEEEECCTTSTTSCCC----SSCCSHHHHH
T ss_pred CCCeEEEEEecC--CCCcEEEEcCCCchhhHHhh------hHHHHHhCCcEEEEeCCCCCCCCCCC----CCCCCHHHHH
Confidence 456789999888 46779999999998876542 33455567999999999999999754 2458999999
Q ss_pred HHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCC-CcceEEEecCCCCCCC--------hHHHHHHHHHHHHHHhhcc
Q 018947 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 107 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 177 (348)
+|+.+++++++.++++|+||||||.+++.+|.++|+ +|+++|++++...... ...... ..+...... ..
T Consensus 78 ~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 155 (279)
T 1hkh_A 78 ADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVF-DGIEAAAKG-DR 155 (279)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHH-HHHHHHHHH-CH
T ss_pred HHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHH-HHHHHHhhh-hh
Confidence 999999999999999999999999999999999999 9999999997543110 000000 000000000 00
Q ss_pred chhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccC---CccEEEEecCCCC
Q 018947 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL---QCRSLIFVGESSP 254 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~Pvl~i~g~~D~ 254 (348)
.... ......++....... .....+..+.+..................+ ..+....+.++ ++|+|+|+|++|.
T Consensus 156 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~~~~P~lii~G~~D~ 231 (279)
T 1hkh_A 156 FAWF-TDFYKNFYNLDENLG-SRISEQAVTGSWNVAIGSAPVAAYAVVPAW--IEDFRSDVEAVRAAGKPTLILHGTKDN 231 (279)
T ss_dssp HHHH-HHHHHHHHTHHHHBT-TTBCHHHHHHHHHHHHTSCTTHHHHTHHHH--TCBCHHHHHHHHHHCCCEEEEEETTCS
T ss_pred hhhH-HHHHhhhhhcccCCc-ccccHHHHHhhhhhhccCcHHHHHHHHHHH--hhchhhhHHHhccCCCCEEEEEcCCCc
Confidence 0111 111222222110000 000333333333333223333333333333 24556667788 9999999999999
Q ss_pred CCc--hH-HHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 255 FHS--EA-VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 255 ~~~--~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+++ .. +.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 232 ~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 232 ILPIDATARRFHQAVPE--ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp SSCTTTTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred cCChHHHHHHHHHhCCC--eeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 883 34 677888876 9999999999999999999999999999963
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=248.00 Aligned_cols=270 Identities=12% Similarity=0.133 Sum_probs=170.4
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
+..++..+|.+++|...| ++|+|||+||++++...|.. .+..+..+||+||++|+||||.|+.+.......+
T Consensus 12 ~~~~~~~~g~~l~y~~~G--~g~~vvllHG~~~~~~~w~~------~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~ 83 (328)
T 2cjp_A 12 EHKMVAVNGLNMHLAELG--EGPTILFIHGFPELWYSWRH------QMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKF 83 (328)
T ss_dssp EEEEEEETTEEEEEEEEC--SSSEEEEECCTTCCGGGGHH------HHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGG
T ss_pred heeEecCCCcEEEEEEcC--CCCEEEEECCCCCchHHHHH------HHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccc
Confidence 345677789999999998 57899999999998866532 2244556799999999999999975410123468
Q ss_pred CHHHHHHHHHHHHHHcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC----ChHHHHHHHHHHH--HH
Q 018947 101 SVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP----SWTEWLYNKVMSN--LL 172 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----~~~~~~~~~~~~~--~~ 172 (348)
+++++++|+.+++++++ .++++|+||||||.+++.+|.++|++|+++|++++..... ....... ..... ..
T Consensus 84 ~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 162 (328)
T 2cjp_A 84 SILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLK-AIYGEDHYI 162 (328)
T ss_dssp SHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHH-HHHCTTBHH
T ss_pred cHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHH-hhcccchHH
Confidence 99999999999999999 9999999999999999999999999999999999764321 1111110 00000 00
Q ss_pred Hhhccch----h----HHHHHHHhhhc---cc---------ccCCC-------CCCChHHHHHHHHHHhhhchhhHHHHH
Q 018947 173 YYYGMCG----V----VKELLLKRYFS---KE---------VRGNA-------QVPESDIVQACRRLLDERQSSNVWHFL 225 (348)
Q Consensus 173 ~~~~~~~----~----~~~~~~~~~~~---~~---------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (348)
....... . .....+..++. .. ..... .....+..+.+...+...........+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T 2cjp_A 163 SRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYY 242 (328)
T ss_dssp HHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHH
T ss_pred HhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHH
Confidence 0000000 0 01122222321 00 00000 000111222222222111111111111
Q ss_pred HHHcCCccHH--hhhccCCccEEEEecCCCCCCch--------HHHHHHhhccCCc-EEEEecCCCCCccccChhhhHHH
Q 018947 226 EAINGRPDIS--EGLRKLQCRSLIFVGESSPFHSE--------AVHMTSKIDRRYS-ALVEVQACGSMVTEEQPHAMLIP 294 (348)
Q Consensus 226 ~~~~~~~~~~--~~l~~i~~Pvl~i~g~~D~~~~~--------~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~ 294 (348)
.......+.. ..+.++++|+++|+|++|.+++. .+.+.+.+++ + ++++++++||++++|+|+++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~i~~~gH~~~~e~p~~~~~~ 320 (328)
T 2cjp_A 243 RALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPL--LEEVVVLEGAAHFVSQERPHEISKH 320 (328)
T ss_dssp HTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTT--BCCCEEETTCCSCHHHHSHHHHHHH
T ss_pred HhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcC--CeeEEEcCCCCCCcchhCHHHHHHH
Confidence 1110000000 13578899999999999998842 1356666776 7 79999999999999999999999
Q ss_pred HHHHHhh
Q 018947 295 MEYFLMG 301 (348)
Q Consensus 295 i~~fl~~ 301 (348)
|.+||++
T Consensus 321 i~~fl~~ 327 (328)
T 2cjp_A 321 IYDFIQK 327 (328)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999975
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-34 Score=243.83 Aligned_cols=267 Identities=12% Similarity=0.112 Sum_probs=183.4
Q ss_pred CCCCCCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 15 TPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 15 ~~~~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
...+..+.+++.+++.+++|...|++++|+|||+||++++...|... ...+.+||+|+++|+||||.|..+.
T Consensus 5 ~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~vl~lHG~~~~~~~~~~~-------~~~l~~~~~v~~~d~~G~G~s~~~~- 76 (299)
T 3g9x_A 5 GTGFPFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNI-------IPHVAPSHRCIAPDLIGMGKSDKPD- 76 (299)
T ss_dssp CCCCCCCCEEEEETTEEEEEEEESCSSSCCEEEECCTTCCGGGGTTT-------HHHHTTTSCEEEECCTTSTTSCCCC-
T ss_pred CCCcccceeeeeeCCeEEEEEecCCCCCCEEEEECCCCccHHHHHHH-------HHHHccCCEEEeeCCCCCCCCCCCC-
Confidence 33556677889999999999999987789999999999988765422 3455779999999999999997542
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHH-HHHHHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY-NKVMSNLLY 173 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~ 173 (348)
..++++++++|+.+++++++.++++++|||+||.+++.+|.++|++|+++|++++......+..+.. .......+.
T Consensus 77 ---~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (299)
T 3g9x_A 77 ---LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFR 153 (299)
T ss_dssp ---CCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHT
T ss_pred ---CcccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHc
Confidence 2689999999999999999999999999999999999999999999999999996555432211100 000000000
Q ss_pred hh--------ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcC----------CccH
Q 018947 174 YY--------GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAING----------RPDI 234 (348)
Q Consensus 174 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~ 234 (348)
.. ...... .......+.... .......+....... .......+...... ..+.
T Consensus 154 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (299)
T 3g9x_A 154 TADVGRELIIDQNAFI-EGALPKCVVRPL-------TEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAY 225 (299)
T ss_dssp SSSHHHHHHTTSCHHH-HTHHHHTCSSCC-------CHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHH
T ss_pred CCCcchhhhccchhhH-HHhhhhhhccCC-------CHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhh
Confidence 00 000000 111111111110 223333332222111 11111122111100 0134
Q ss_pred HhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 235 SEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 235 ~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
...+.++++|+++|+|++|.++ .....+.+.+++ +++++++++||++++|+|+++++.|.+|+.+.
T Consensus 226 ~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~ 293 (299)
T 3g9x_A 226 MNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPN--CKTVDIGPGLHYLQEDNPDLIGSEIARWLPAL 293 (299)
T ss_dssp HHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCHHHHCHHHHHHHHHHHSGGG
T ss_pred hhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhCCC--CeEEEeCCCCCcchhcCHHHHHHHHHHHHhhh
Confidence 4557889999999999999998 355668888877 89999999999999999999999999999876
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=245.23 Aligned_cols=270 Identities=11% Similarity=0.037 Sum_probs=181.7
Q ss_pred CCCCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 17 PPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 17 ~~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
.+..+..++.+++.+++|...| ++|+|||+||++++...|.. .+..++.+||+|+++|+||||.|..+
T Consensus 6 ~~~~~~~~~~~~g~~l~~~~~g--~~~~vv~~HG~~~~~~~~~~------~~~~l~~~g~~v~~~d~~G~G~S~~~---- 73 (309)
T 3u1t_A 6 EFPFAKRTVEVEGATIAYVDEG--SGQPVLFLHGNPTSSYLWRN------IIPYVVAAGYRAVAPDLIGMGDSAKP---- 73 (309)
T ss_dssp CCCCCCEEEEETTEEEEEEEEE--CSSEEEEECCTTCCGGGGTT------THHHHHHTTCEEEEECCTTSTTSCCC----
T ss_pred cccccceEEEECCeEEEEEEcC--CCCEEEEECCCcchhhhHHH------HHHHHHhCCCEEEEEccCCCCCCCCC----
Confidence 3456777889999999999999 48899999999998876532 22455788999999999999999754
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC----ChHHHHHH-HHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP----SWTEWLYN-KVMSNL 171 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----~~~~~~~~-~~~~~~ 171 (348)
...++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++..... .+..+... ......
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (309)
T 3u1t_A 74 DIEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRD 153 (309)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHH
Confidence 2368999999999999999999999999999999999999999999999999999776543 11111100 000000
Q ss_pred HHhhccchh---HHHHHHHhhhccc-ccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcC----------CccHHh
Q 018947 172 LYYYGMCGV---VKELLLKRYFSKE-VRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAING----------RPDISE 236 (348)
Q Consensus 172 ~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~ 236 (348)
+........ ........++... ... ....+..+.+....... .......+...... ..+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (309)
T 3u1t_A 154 LRTADVGEKMVLDGNFFVETILPEMGVVR---SLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGE 230 (309)
T ss_dssp HTSTTHHHHHHTTTCHHHHTHHHHTSCSS---CCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHH
T ss_pred Hhccchhhhhccccceehhhhcccccccc---cCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhh
Confidence 000000000 0001111111111 000 00233333332221111 11111111111100 013445
Q ss_pred hhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 237 GLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 237 ~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
.+.++++|+++|+|++|.+++ ....+.+.+++ .++++++++||+++.++|+++++.|.+||++..
T Consensus 231 ~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 297 (309)
T 3u1t_A 231 WLMASPIPKLLFHAEPGALAPKPVVDYLSENVPN--LEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNK 297 (309)
T ss_dssp HHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred hcccCCCCEEEEecCCCCCCCHHHHHHHHhhCCC--CEEEEecCCcccchhhCHHHHHHHHHHHHHhcc
Confidence 678899999999999999983 44578888887 888888999999999999999999999999985
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=242.43 Aligned_cols=265 Identities=12% Similarity=0.103 Sum_probs=178.6
Q ss_pred CCCCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 17 PPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 17 ~~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
+...+..++.++|.+++|...| ++|+|||+||++++...|... ...+.+.|+|+++|+||||.|..+
T Consensus 7 ~~~~~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~~-------~~~L~~~~~vi~~D~~G~G~S~~~---- 73 (301)
T 3kda_A 7 PNGFESAYREVDGVKLHYVKGG--QGPLVMLVHGFGQTWYEWHQL-------MPELAKRFTVIAPDLPGLGQSEPP---- 73 (301)
T ss_dssp CTTCEEEEEEETTEEEEEEEEE--SSSEEEEECCTTCCGGGGTTT-------HHHHTTTSEEEEECCTTSTTCCCC----
T ss_pred ccccceEEEeeCCeEEEEEEcC--CCCEEEEECCCCcchhHHHHH-------HHHHHhcCeEEEEcCCCCCCCCCC----
Confidence 3455677888899999999999 788999999999998765432 244455599999999999999754
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCc-eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh---------------H
Q 018947 97 EPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW---------------T 160 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---------------~ 160 (348)
...++++++++|+.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++....... .
T Consensus 74 ~~~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (301)
T 3kda_A 74 KTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWH 153 (301)
T ss_dssp SSCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTH
T ss_pred CCCccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhh
Confidence 356899999999999999999988 999999999999999999999999999999987532111 0
Q ss_pred HHHHH--HHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHHc----CCcc
Q 018947 161 EWLYN--KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAIN----GRPD 233 (348)
Q Consensus 161 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~ 233 (348)
..... ......+. ..........+...++...... ..+..+.+...+.... .......+..+. ....
T Consensus 154 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (301)
T 3kda_A 154 FSFFAADDRLAETLI-AGKERFFLEHFIKSHASNTEVF-----SERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAE 227 (301)
T ss_dssp HHHHHCSTTHHHHHH-TTCHHHHHHHHHHHTCSSGGGS-----CHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHhhcCcchHHHHh-ccchHHHHHHHHHhccCCcccC-----CHHHHHHHHHHhccccccchHHHHHHhhccchhhccc
Confidence 00000 00000000 0111111122222222211110 3344444433332211 111111111110 0011
Q ss_pred HHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 234 ISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 234 ~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
....+.++++|+++|+|++|........+.+.+++ +++++++++||++++|+|+++++.|.+|+++.
T Consensus 228 ~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~ 294 (301)
T 3kda_A 228 LAKTRLQMPTMTLAGGGAGGMGTFQLEQMKAYAED--VEGHVLPGCGHWLPEECAAPMNRLVIDFLSRG 294 (301)
T ss_dssp HTTSCBCSCEEEEEECSTTSCTTHHHHHHHTTBSS--EEEEEETTCCSCHHHHTHHHHHHHHHHHHTTS
T ss_pred chhhccccCcceEEEecCCCCChhHHHHHHhhccc--CeEEEcCCCCcCchhhCHHHHHHHHHHHHhhC
Confidence 12234489999999999999332556668888877 99999999999999999999999999999886
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=240.63 Aligned_cols=259 Identities=15% Similarity=0.191 Sum_probs=170.6
Q ss_pred cceeecC--C--ceeEEEEccCCCCC-eEEEeCCCC---CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 22 DNLIKTS--H--GSLSVTIYGDQDKP-ALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 22 ~~~v~~~--~--~~l~~~~~g~~~~p-~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
..+++++ | .+++|...|+ ++ +|||+||++ .+...|. ..+...+.++|+|+++|+||||.|+.+.
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~--g~~~vvllHG~~~~~~~~~~~~------~~~~~~l~~~~~vi~~D~~G~G~S~~~~ 84 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQ--GDETVVLLHGSGPGATGWANFS------RNIDPLVEAGYRVILLDCPGWGKSDSVV 84 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECC--CSSEEEEECCCSTTCCHHHHTT------TTHHHHHHTTCEEEEECCTTSTTSCCCC
T ss_pred ceEEEEcCCCcEEEEEEeccCC--CCceEEEECCCCcccchhHHHH------HhhhHHHhcCCeEEEEcCCCCCCCCCCC
Confidence 4466666 8 8999999984 45 999999997 4433321 2221455667999999999999997542
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH---HHHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT---EWLYNKVMSN 170 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~ 170 (348)
...++++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++........ ..........
T Consensus 85 ---~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (289)
T 1u2e_A 85 ---NSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQ 161 (289)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHH
T ss_pred ---ccccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHH
Confidence 1257899999999999999999999999999999999999999999999999999876421100 0000011111
Q ss_pred HHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHc----CCccHHhhhccCCccEE
Q 018947 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN----GRPDISEGLRKLQCRSL 246 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~Pvl 246 (348)
.... ...... ...+..++..... ..++.......... .....+......+. ...+....+.++++|+|
T Consensus 162 ~~~~-~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 233 (289)
T 1u2e_A 162 LYRQ-PTIENL-KLMMDIFVFDTSD-----LTDALFEARLNNML-SRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTL 233 (289)
T ss_dssp HHHS-CCHHHH-HHHHHTTSSCTTS-----CCHHHHHHHHHHHH-HTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEE
T ss_pred HHhc-chHHHH-HHHHHHhhcCccc-----CCHHHHHHHHHHhh-cChhHHHHHHHHHHhccccccchhhHHhhcCCCeE
Confidence 1100 000111 1112211111100 02232222211111 11222222222211 12344567889999999
Q ss_pred EEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 247 IFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 247 ~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+|+|++|.+++ ..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 234 ii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 234 IVWGRNDRFVPMDAGLRLLSGIAG--SELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp EEEETTCSSSCTHHHHHHHHHSTT--CEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred EEeeCCCCccCHHHHHHHHhhCCC--cEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 99999999883 45568888887 8999999999999999999999999999964
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=243.84 Aligned_cols=261 Identities=11% Similarity=0.077 Sum_probs=167.4
Q ss_pred cceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
..++..+|.+++|...|++.+|+|||+||++++...|... ...+.++|+|+++|+||||.|+.+ ....++
T Consensus 23 ~~~~~~~g~~l~y~~~G~g~~~~vvllHG~~~~~~~w~~~-------~~~L~~~~~via~Dl~GhG~S~~~---~~~~~~ 92 (318)
T 2psd_A 23 CKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHV-------VPHIEPVARCIIPDLIGMGKSGKS---GNGSYR 92 (318)
T ss_dssp CEEEEETTEEEEEEECCSCTTSEEEEECCTTCCGGGGTTT-------GGGTTTTSEEEEECCTTSTTCCCC---TTSCCS
T ss_pred ceEEeeCCeEEEEEEcCCCCCCeEEEECCCCCcHHHHHHH-------HHHhhhcCeEEEEeCCCCCCCCCC---CCCccC
Confidence 3567889999999999966667999999999988765432 255667789999999999999754 123589
Q ss_pred HHHHHHHHHHHHHHcCC-CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC----ChH--HHHHHHHHHHHHHh
Q 018947 102 VDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP----SWT--EWLYNKVMSNLLYY 174 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----~~~--~~~~~~~~~~~~~~ 174 (348)
++++++|+.++++++++ ++++|+||||||.+++.+|.++|++|+++|++++..... .+. ..............
T Consensus 93 ~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (318)
T 2psd_A 93 LLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEK 172 (318)
T ss_dssp HHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchh
Confidence 99999999999999999 999999999999999999999999999999988542211 000 00000000000000
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc--hhhHHHHHHHHcC-----------CccHHhhhccC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ--SSNVWHFLEAING-----------RPDISEGLRKL 241 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----------~~~~~~~l~~i 241 (348)
..... ..+...++....... ...+..+.+...+.... ......+...+.. ..+..+.+.++
T Consensus 173 ~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 246 (318)
T 2psd_A 173 MVLEN---NFFVETVLPSKIMRK---LEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRAS 246 (318)
T ss_dssp HHTTT---CHHHHTHHHHTCSSC---CCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTC
T ss_pred hhhcc---hHHHHhhcccccccc---CCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccc
Confidence 00000 001111111000000 02222222222111000 0000000000000 01233456678
Q ss_pred -CccEEEEecCCCCCC-chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 242 -QCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 242 -~~Pvl~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++|+|+|+|++| ++ +....+.+.+++ .+++++ ++||++++|+|+++++.|.+||++.
T Consensus 247 ~~~P~Lvi~G~~D-~~~~~~~~~~~~~~~--~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 247 DDLPKLFIESDPG-FFSNAIVEGAKKFPN--TEFVKV-KGLHFLQEDAPDEMGKYIKSFVERV 305 (318)
T ss_dssp TTSCEEEEEEEEC-SSHHHHHHHHTTSSS--EEEEEE-EESSSGGGTCHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEeccc-cCcHHHHHHHHhCCC--cEEEEe-cCCCCCHhhCHHHHHHHHHHHHHHh
Confidence 999999999999 77 444557777776 888888 6899999999999999999999875
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=234.75 Aligned_cols=243 Identities=13% Similarity=0.128 Sum_probs=163.7
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCC-hhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALN-YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~-~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
+..++..+|.+++|...|+ +.++|||+||++++ ...|. +.+..+..+||+|+++|+||||.|..+. ..
T Consensus 3 ~~~~~~~~g~~l~~~~~g~-~~~~vvllHG~~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~ 71 (254)
T 2ocg_A 3 TSAKVAVNGVQLHYQQTGE-GDHAVLLLPGMLGSGETDFG------PQLKNLNKKLFTVVAWDPRGYGHSRPPD----RD 71 (254)
T ss_dssp EEEEEEETTEEEEEEEEEC-CSEEEEEECCTTCCHHHHCH------HHHHHSCTTTEEEEEECCTTSTTCCSSC----CC
T ss_pred ceeEEEECCEEEEEEEecC-CCCeEEEECCCCCCCccchH------HHHHHHhhCCCeEEEECCCCCCCCCCCC----CC
Confidence 3456777899999999984 34589999999887 33332 2334555667999999999999997541 23
Q ss_pred CC---HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhc
Q 018947 100 LS---VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 100 ~~---~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (348)
++ +++.++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++........... .........
T Consensus 72 ~~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~ 147 (254)
T 2ocg_A 72 FPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMI----YEGIRDVSK 147 (254)
T ss_dssp CCTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHH----HHTTSCGGG
T ss_pred CChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHH----HHHHHHHHH
Confidence 45 78889999999999999999999999999999999999999999999999865433211100 000000000
Q ss_pred cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHc---CCccHHhhhccCCccEEEEecCCC
Q 018947 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN---GRPDISEGLRKLQCRSLIFVGESS 253 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~Pvl~i~g~~D 253 (348)
+...... .+...+.. ....... ..+...+..+. ......+.+.++++|+|+|+|++|
T Consensus 148 ~~~~~~~-~~~~~~~~-----------~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 207 (254)
T 2ocg_A 148 WSERTRK-PLEALYGY-----------DYFARTC--------EKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKD 207 (254)
T ss_dssp SCHHHHH-HHHHHHCH-----------HHHHHHH--------HHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTC
T ss_pred HHHHhHH-HHHHHhcc-----------hhhHHHH--------HHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCC
Confidence 0000000 00000100 0000000 00011111111 001234567889999999999999
Q ss_pred CCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 254 PFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 254 ~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
.+++ ..+.+.+.+++ +++++++++||+++.|+|+++++.|.+||+
T Consensus 208 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 208 PLVPRFHADFIHKHVKG--SRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp SSSCHHHHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred ccCCHHHHHHHHHhCCC--CEEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence 9883 45567888887 899999999999999999999999999984
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-34 Score=240.93 Aligned_cols=251 Identities=14% Similarity=0.104 Sum_probs=177.7
Q ss_pred ceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018947 30 GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (348)
Q Consensus 30 ~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl 109 (348)
++++|...|+ ++|+|||+||++++...|... ...+.+||+|+++|+||||.|..+.......++++++++|+
T Consensus 9 ~~l~~~~~g~-~~p~vv~~HG~~~~~~~~~~~-------~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (269)
T 4dnp_A 9 DALNVRVVGS-GERVLVLAHGFGTDQSAWNRI-------LPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDL 80 (269)
T ss_dssp HHTTCEEECS-CSSEEEEECCTTCCGGGGTTT-------GGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHH
T ss_pred HHhhhhhcCC-CCCEEEEEeCCCCcHHHHHHH-------HHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHH
Confidence 4577888884 568999999999988765422 24555699999999999999965322223445999999999
Q ss_pred HHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh-------HHHHHHHHHHHHHHhhccchhHH
Q 018947 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW-------TEWLYNKVMSNLLYYYGMCGVVK 182 (348)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 182 (348)
.++++.++.++++++||||||.+++.+|.++|++|+++|++++....... ........... .. .......
T Consensus 81 ~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~- 157 (269)
T 4dnp_A 81 LHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSA-ME-ANYEAWV- 157 (269)
T ss_dssp HHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHH-HH-HCHHHHH-
T ss_pred HHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHh-cc-ccHHHHH-
Confidence 99999999999999999999999999999999999999999987653211 11111111111 00 0111111
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHH
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 260 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~ 260 (348)
.......+... .....+.+...+..............+.. .+..+.+.++++|+++++|++|.++ ....
T Consensus 158 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 228 (269)
T 4dnp_A 158 NGFAPLAVGAD--------VPAAVREFSRTLFNMRPDITLFVSRTVFN-SDMRGVLGLVKVPCHIFQTARDHSVPASVAT 228 (269)
T ss_dssp HHHHHHHHCSS--------CHHHHHHHHHHHHHSCHHHHHHHHHHHHT-CCCGGGGGGCCSCEEEEEEESBTTBCHHHHH
T ss_pred HHhhhhhccCC--------ChhHHHHHHHHHHccCcchhhhHhhhhcc-hhhHhhhccccCCEEEEecCCCcccCHHHHH
Confidence 11122222211 34455555555555555555555554443 4667778899999999999999998 3455
Q ss_pred HHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 261 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.+.+.+++ .+++++++++||+++.++|+++++.|.+||++
T Consensus 229 ~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 229 YLKNHLGG-KNTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp HHHHHSSS-CEEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred HHHHhCCC-CceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 67777775 26899999999999999999999999999975
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-33 Score=238.75 Aligned_cols=269 Identities=17% Similarity=0.158 Sum_probs=175.3
Q ss_pred CCCCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC-
Q 018947 17 PPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD- 95 (348)
Q Consensus 17 ~~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~- 95 (348)
....+..++.+++.+++|...| ++|+|||+||++++...|... ...+.+||+|+++|+||||.|+.+...
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~~-------~~~l~~~~~v~~~D~~G~G~S~~~~~~~ 80 (306)
T 3r40_A 10 FPGFGSEWINTSSGRIFARVGG--DGPPLLLLHGFPQTHVMWHRV-------APKLAERFKVIVADLPGYGWSDMPESDE 80 (306)
T ss_dssp STTCEEEEECCTTCCEEEEEEE--CSSEEEEECCTTCCGGGGGGT-------HHHHHTTSEEEEECCTTSTTSCCCCCCT
T ss_pred ccCCceEEEEeCCEEEEEEEcC--CCCeEEEECCCCCCHHHHHHH-------HHHhccCCeEEEeCCCCCCCCCCCCCCc
Confidence 3455777888899999999999 778999999999998765422 245556999999999999999865221
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHH---HHHHHH----
Q 018947 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW---LYNKVM---- 168 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~---- 168 (348)
....++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++.......... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (306)
T 3r40_A 81 QHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSF 160 (306)
T ss_dssp TCGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHH
Confidence 0125899999999999999999999999999999999999999999999999999985532111110 000000
Q ss_pred -------HHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcCCccHH-----
Q 018947 169 -------SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDIS----- 235 (348)
Q Consensus 169 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----- 235 (348)
...+.. ..........+..+..... .....++..+.+...+... ........+..... .+..
T Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 235 (306)
T 3r40_A 161 LAQPAPLPENLLG-GDPDFYVKAKLASWTRAGD---LSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAY-ADFEHDKID 235 (306)
T ss_dssp HTSCTTHHHHHHT-SCHHHHHHHHHHHTSSSSS---STTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHT-HHHHHHHHH
T ss_pred hhcccchHHHHHc-CCHHHHHHHHhhcccCCCc---cccCCHHHHHHHHHHHccCCCcchhhHHHHhccc-ccchhhhhh
Confidence 000000 0011111222222222100 0111444455544433321 11122222222111 1111
Q ss_pred -hhhccCCccEEEEecCCCCCCc---hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 236 -EGLRKLQCRSLIFVGESSPFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 236 -~~l~~i~~Pvl~i~g~~D~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
..+.++++|+++|+|++|.+++ ....+.+..++ .+++++ ++||+++.|+|+++++.|.+||++.
T Consensus 236 ~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 236 VEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASD--VQGAPI-ESGHFLPEEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp HHHTCCBCSCEEEEEETTCC------CHHHHHHHBSS--EEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC-
T ss_pred hhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCC--CeEEEe-cCCcCchhhChHHHHHHHHHHHHhc
Confidence 2468899999999999999873 23345555665 888888 7999999999999999999999875
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=242.41 Aligned_cols=257 Identities=15% Similarity=0.135 Sum_probs=162.2
Q ss_pred eeecCCceeEEEEccCCC-CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 24 LIKTSHGSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~~-~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
++..+|.+++|..+|+++ +++|||+||++++...|.. . ...+.++|+|+++|+||||.|+.+. ....+++
T Consensus 10 ~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~------~-~~~L~~~~~vi~~Dl~G~G~S~~~~--~~~~~~~ 80 (285)
T 3bwx_A 10 WTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFED------L-ATRLAGDWRVLCPEMRGRGDSDYAK--DPMTYQP 80 (285)
T ss_dssp EECTTSCEEEEEEECBCTTSCCEEEECCTTCCGGGGHH------H-HHHHBBTBCEEEECCTTBTTSCCCS--SGGGCSH
T ss_pred eecCCCceEEEEEcCCCCCCCcEEEECCCCcchhhHHH------H-HHHhhcCCEEEeecCCCCCCCCCCC--CccccCH
Confidence 444578899999998654 7899999999998866532 2 3455669999999999999997541 1245899
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhc-cchhH
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG-MCGVV 181 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 181 (348)
+++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.+....... ........... .....
T Consensus 81 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 156 (285)
T 3bwx_A 81 MQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGL----ERIRGYVGQGRNFETWM 156 (285)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHH----HHHHHHTTCCCEESSHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchh----HHHHHHhcCCcccccHH
Confidence 99999999999999999999999999999999999999999999999986543321110 00000000000 00000
Q ss_pred -HHHHHHhhhcccccCCCCCCChH-HHHHHHHHHhhhch--------hhHHHHHHHH---cCCccHHhhhccC-CccEEE
Q 018947 182 -KELLLKRYFSKEVRGNAQVPESD-IVQACRRLLDERQS--------SNVWHFLEAI---NGRPDISEGLRKL-QCRSLI 247 (348)
Q Consensus 182 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~l~~i-~~Pvl~ 247 (348)
....+...+....... ... .............. ......+... ....+....+.++ ++|+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li 232 (285)
T 3bwx_A 157 HAARALQESSGDVYPDW----DITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLV 232 (285)
T ss_dssp HHHHHHHHHHTTTSTTC----CHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEE
T ss_pred HHHHHHHHhhhhccccc----ChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEE
Confidence 0011111111111000 111 11111111110000 0000000000 0011223334455 799999
Q ss_pred EecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 248 FVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 248 i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
|+|++|.+++ ..+.+++. ++ +++++++++||++++|+|+.+ +.|.+||++
T Consensus 233 i~G~~D~~~~~~~~~~~~~~-~~--~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 233 LRGETSDILSAQTAAKMASR-PG--VELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp EEETTCSSSCHHHHHHHHTS-TT--EEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred EEeCCCCccCHHHHHHHHhC-CC--cEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 9999999883 44556666 55 999999999999999999987 579999975
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-33 Score=236.45 Aligned_cols=265 Identities=15% Similarity=0.145 Sum_probs=170.5
Q ss_pred CccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC-CCC
Q 018947 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEP 98 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~-~~~ 98 (348)
.+.+++.+++.+++|...| ++++|||+||++++...|... ...+.++|+|+++|+||||.|+.+... ...
T Consensus 5 ~~~~~~~~~~~~~~~~~~g--~g~~~vllHG~~~~~~~w~~~-------~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~ 75 (291)
T 3qyj_A 5 FEQTIVDTTEARINLVKAG--HGAPLLLLHGYPQTHVMWHKI-------APLLANNFTVVATDLRGYGDSSRPASVPHHI 75 (291)
T ss_dssp CEEEEEECSSCEEEEEEEC--CSSEEEEECCTTCCGGGGTTT-------HHHHTTTSEEEEECCTTSTTSCCCCCCGGGG
T ss_pred cceeEEecCCeEEEEEEcC--CCCeEEEECCCCCCHHHHHHH-------HHHHhCCCEEEEEcCCCCCCCCCCCCCcccc
Confidence 3566788999999999988 678999999999998776432 356678999999999999999865221 113
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH---HHHHHHHHHHHHHh-
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT---EWLYNKVMSNLLYY- 174 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~- 174 (348)
.++.+.+++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++.+...... ...........+..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3qyj_A 76 NYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQ 155 (291)
T ss_dssp GGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTC
T ss_pred ccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhcc
Confidence 48999999999999999999999999999999999999999999999999998754211000 00000000000000
Q ss_pred ---------hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHHcC---CccHHhhhccC
Q 018947 175 ---------YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAING---RPDISEGLRKL 241 (348)
Q Consensus 175 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~i 241 (348)
...........+..+...... ..++..+.+...+.... .......+..... ..+....+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (291)
T 3qyj_A 156 PDNLPETLIGANPEYYLRKCLEKWGKDFSA-----FHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKI 230 (291)
T ss_dssp STTHHHHHHHTCHHHHHHHHHHHHCSCGGG-----SCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCB
T ss_pred CCCchHHHHcCCHHHHHHHHHHhcCCCccc-----CCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCcc
Confidence 000000011122222111000 03444444443332211 1111122222111 01112346789
Q ss_pred CccEEEEecCCCCCCc---hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 242 QCRSLIFVGESSPFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 242 ~~Pvl~i~g~~D~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++|+|+|+|++|.+.+ ......+..++ .+..+++ +||+++.|+|+++++.|.+||+.
T Consensus 231 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 231 SCPVLVLWGEKGIIGRKYDVLATWRERAID--VSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp CSCEEEEEETTSSHHHHSCHHHHHHTTBSS--EEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred ccceEEEecccccccchhhHHHHHHhhcCC--cceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 9999999999997542 23334444444 7777885 99999999999999999999975
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=234.05 Aligned_cols=256 Identities=11% Similarity=0.074 Sum_probs=177.4
Q ss_pred cCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH
Q 018947 27 TSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (348)
Q Consensus 27 ~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (348)
.++.+++|...| ++|+|||+||++++...|.... +..++++||+|+++|+||||.|..+ ..+++++++
T Consensus 30 ~~~~~l~y~~~g--~~~~vv~lHG~~~~~~~~~~~~-----~~~l~~~g~~vi~~D~~G~G~s~~~-----~~~~~~~~~ 97 (293)
T 3hss_A 30 FRVINLAYDDNG--TGDPVVFIAGRGGAGRTWHPHQ-----VPAFLAAGYRCITFDNRGIGATENA-----EGFTTQTMV 97 (293)
T ss_dssp SCEEEEEEEEEC--SSEEEEEECCTTCCGGGGTTTT-----HHHHHHTTEEEEEECCTTSGGGTTC-----CSCCHHHHH
T ss_pred cccceEEEEEcC--CCCEEEEECCCCCchhhcchhh-----hhhHhhcCCeEEEEccCCCCCCCCc-----ccCCHHHHH
Confidence 456689999988 7789999999999987764212 2466688999999999999988643 347999999
Q ss_pred HHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHH-HHH
Q 018947 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK-ELL 185 (348)
Q Consensus 107 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 185 (348)
+|+.+++++++.++++++|||+||.+++.+|.++|++|+++|++++.............................. ...
T Consensus 98 ~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (293)
T 3hss_A 98 ADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARAR 177 (293)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999877654333222111111111111111110 000
Q ss_pred HHhhhcccccCCCCCCChHHHHHHHHHHhhhch---hhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHH
Q 018947 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQS---SNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAV 260 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~ 260 (348)
....+...... .......+......... ..+.... ......+....+.++++|+++|+|++|.+++ ...
T Consensus 178 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~ 251 (293)
T 3hss_A 178 LLENFSRKTLN-----DDVAVGDWIAMFSMWPIKSTPGLRCQL-DCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGR 251 (293)
T ss_dssp HHHHSCHHHHT-----CHHHHHHHHHHHHHSCCCCCHHHHHHH-TSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHH
T ss_pred Hhhhccccccc-----ccccHHHHHHHHhhccccccHHHHhHh-hhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHH
Confidence 01111111111 12222222222221111 1122222 1223345667788999999999999999983 456
Q ss_pred HHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 261 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.+.+++ +++++++++||+++.++|+++++.|.+||+++
T Consensus 252 ~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 252 EVADALPN--GRYLQIPDAGHLGFFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp HHHHHSTT--EEEEEETTCCTTHHHHSHHHHHHHHHHHHHTC
T ss_pred HHHHHCCC--ceEEEeCCCcchHhhhCHHHHHHHHHHHHHhc
Confidence 68888877 89999999999999999999999999999875
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-33 Score=232.69 Aligned_cols=245 Identities=15% Similarity=0.121 Sum_probs=155.1
Q ss_pred EccCCCC--CeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 018947 36 IYGDQDK--PALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV 112 (348)
Q Consensus 36 ~~g~~~~--p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~ 112 (348)
.+|++++ |+|||+||++++...|... ...+. ++|+|+++|+||||.|..+ ..++++++++|+.++
T Consensus 8 ~~g~~~~~~~~vvllHG~~~~~~~w~~~-------~~~L~~~~~~vi~~Dl~GhG~S~~~-----~~~~~~~~a~~l~~~ 75 (264)
T 1r3d_A 8 HFAKPTARTPLVVLVHGLLGSGADWQPV-------LSHLARTQCAALTLDLPGHGTNPER-----HCDNFAEAVEMIEQT 75 (264)
T ss_dssp ESSCCBTTBCEEEEECCTTCCGGGGHHH-------HHHHTTSSCEEEEECCTTCSSCC------------CHHHHHHHHH
T ss_pred ccCCCCCCCCcEEEEcCCCCCHHHHHHH-------HHHhcccCceEEEecCCCCCCCCCC-----CccCHHHHHHHHHHH
Confidence 5666544 8999999999998765422 24455 8999999999999999743 236889999999999
Q ss_pred HHHcCCCc--eeEEEeChhHHHHHH---HHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 018947 113 LNHFGLGA--VMCMGVTAGAYILTL---FAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (348)
Q Consensus 113 l~~l~~~~--v~lvGhS~Gg~ia~~---~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (348)
+++++.++ ++|+||||||.+++. +|.++|++|+++|++++...................+......... .....
T Consensus 76 l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 154 (264)
T 1r3d_A 76 VQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPI-EHVLS 154 (264)
T ss_dssp HHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCH-HHHHH
T ss_pred HHHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccH-HHHHH
Confidence 99999876 999999999999999 8889999999999998765543322211110000000000000001 12222
Q ss_pred hhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHH--cCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHh
Q 018947 188 RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSK 265 (348)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 265 (348)
.++........ .....+.+...............+... ....+..+.+.++++|+++|+|++|..+. .+.+.
T Consensus 155 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~---~~~~~ 228 (264)
T 1r3d_A 155 DWYQQAVFSSL---NHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ---QLAES 228 (264)
T ss_dssp HHTTSGGGTTC---CHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH---HHHHH
T ss_pred HHhhhhhhhcc---CHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH---HHHHH
Confidence 33322111110 223222222222211222222222221 11235566788999999999999998542 33444
Q ss_pred hccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 266 IDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 266 ~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+. .++++++++||++++|+|+++++.|.+|++++
T Consensus 229 ~~---~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 229 SG---LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HC---SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred hC---CcEEEcCCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 43 67999999999999999999999999999875
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=230.73 Aligned_cols=248 Identities=15% Similarity=0.153 Sum_probs=170.2
Q ss_pred ceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
.++..+|.+++|...| ++|+|||+||++++...|.. . ...+.+||+|+++|+||||.|..+ ..+++
T Consensus 6 ~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~------~-~~~l~~~~~vi~~d~~G~G~S~~~-----~~~~~ 71 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSG--SGPPVVLVGGALSTRAGGAP------L-AERLAPHFTVICYDRRGRGDSGDT-----PPYAV 71 (262)
T ss_dssp EEECTTSCEEEEEEEE--CSSEEEEECCTTCCGGGGHH------H-HHHHTTTSEEEEECCTTSTTCCCC-----SSCCH
T ss_pred eEEcCCCcEEEEEEcC--CCCcEEEECCCCcChHHHHH------H-HHHHhcCcEEEEEecCCCcCCCCC-----CCCCH
Confidence 4566788999999999 57899999999999866532 2 345558999999999999999754 25899
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH---HHHHHHHHHHHHhhccch
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---WLYNKVMSNLLYYYGMCG 179 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 179 (348)
+++++|+.+++++++ ++++++|||+||.+++.+|.++| +|+++|++++......... ......+...+.....
T Consensus 72 ~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 147 (262)
T 3r0v_A 72 EREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRR-- 147 (262)
T ss_dssp HHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccch--
Confidence 999999999999999 99999999999999999999999 9999999998776532110 0000111111111111
Q ss_pred hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHh----hhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLD----ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
......++...... .++..+.+..... ..................+....+.++++|+++|+|++|.+
T Consensus 148 ---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 219 (262)
T 3r0v_A 148 ---GDAVTYFMTEGVGV-----PPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPA 219 (262)
T ss_dssp ---HHHHHHHHHHTSCC-----CHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCH
T ss_pred ---hhHHHHHhhcccCC-----CHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCC
Confidence 11122222210100 3333333322110 00011111111222223344677889999999999999998
Q ss_pred C--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 256 H--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+ .....+.+.+++ +++++++++|| +++|+++++.|.+||++
T Consensus 220 ~~~~~~~~~~~~~~~--~~~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 220 WIRHTAQELADTIPN--ARYVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp HHHHHHHHHHHHSTT--EEEEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHhCCC--CeEEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 8 355568888877 89999999999 47899999999999964
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=235.04 Aligned_cols=265 Identities=11% Similarity=0.093 Sum_probs=175.9
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
+..++..++.+++|...| ++|+|||+||++++...|... ...+.++|+|+++|+||||.|..+.......+
T Consensus 9 ~~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~~-------~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 79 (297)
T 2qvb_A 9 QPKYLEIAGKRMAYIDEG--KGDAIVFQHGNPTSSYLWRNI-------MPHLEGLGRLVACDLIGMGASDKLSPSGPDRY 79 (297)
T ss_dssp CCEEEEETTEEEEEEEES--SSSEEEEECCTTCCGGGGTTT-------GGGGTTSSEEEEECCTTSTTSCCCSSCSTTSS
T ss_pred CceEEEECCEEEEEEecC--CCCeEEEECCCCchHHHHHHH-------HHHHhhcCeEEEEcCCCCCCCCCCCCccccCc
Confidence 445788899999999999 479999999999988765322 25566779999999999999975522122338
Q ss_pred CHHHHHHHHHHHHHHcCC-CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHH--HHHHHHHHHHhhcc
Q 018947 101 SVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL--YNKVMSNLLYYYGM 177 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 177 (348)
+++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++......+.... ....... +.....
T Consensus 80 ~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (297)
T 2qvb_A 80 SYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQG-FRSPQG 158 (297)
T ss_dssp CHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHH-HTSTTH
T ss_pred CHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHH-Hhcccc
Confidence 999999999999999999 999999999999999999999999999999999877532211000 0000000 000000
Q ss_pred chhH--HHHHHHhhhcccccCCCCCCChHHHHHHHHHHhh--hchhhHHHHHHHHc----------CCccHHhhhccCCc
Q 018947 178 CGVV--KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE--RQSSNVWHFLEAIN----------GRPDISEGLRKLQC 243 (348)
Q Consensus 178 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~l~~i~~ 243 (348)
.... ...++..++....... ...+..+.+...+.. ........++..+. ...+....+.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 235 (297)
T 2qvb_A 159 EPMALEHNIFVERVLPGAILRQ---LSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDM 235 (297)
T ss_dssp HHHHHTTCHHHHTHHHHTCSSC---CCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCS
T ss_pred hhhhccccHHHHHHHhcccccc---CCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccc
Confidence 0000 0011222221111000 023333333322211 11122222222221 01234566788999
Q ss_pred cEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 244 RSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 244 Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|+|+|+|++|.+++ ..+.+.+.+++ +++++ ++||+++.++|+++++.|.+||++.
T Consensus 236 P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 236 PKLFINAEPGAIITGRIRDYVRSWPNQ---TEITV-PGVHFVQEDSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHTSSSE---EEEEE-EESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcCCHHHHHHHHHHcCC---eEEEe-cCccchhhhCHHHHHHHHHHHHHHH
Confidence 99999999999983 44556676664 78888 9999999999999999999999876
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=239.35 Aligned_cols=264 Identities=14% Similarity=0.139 Sum_probs=179.7
Q ss_pred CccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
.+++++.+++++++|...+ +++|+|||+||++++...|. ..+..++.+||+|+++|+||||.|..+. .....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~vv~lHG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~ 74 (279)
T 4g9e_A 3 INYHELETSHGRIAVRESE-GEGAPLLMIHGNSSSGAIFA------PQLEGEIGKKWRVIAPDLPGHGKSTDAI-DPDRS 74 (279)
T ss_dssp CEEEEEEETTEEEEEEECC-CCEEEEEEECCTTCCGGGGH------HHHHSHHHHHEEEEEECCTTSTTSCCCS-CHHHH
T ss_pred eEEEEEEcCCceEEEEecC-CCCCeEEEECCCCCchhHHH------HHHhHHHhcCCeEEeecCCCCCCCCCCC-CcccC
Confidence 4567889999999999887 46789999999999887653 2234557789999999999999997541 12345
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH-HHhhccc
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL-LYYYGMC 178 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 178 (348)
++++++++++.++++.++.++++++||||||.+++.+|.++|+ +.++|++++................... .......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 4g9e_A 75 YSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFS 153 (279)
T ss_dssp SSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCccccc
Confidence 7999999999999999999999999999999999999999998 8999999887765433221100000000 0000111
Q ss_pred hhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCch
Q 018947 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSE 258 (348)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~ 258 (348)
......+...++.... .....+.+..... .........+... ...+....+.++++|+++|+|++|.+++.
T Consensus 154 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 224 (279)
T 4g9e_A 154 ERDVESYARSTCGEPF-------EASLLDIVARTDG-RARRIMFEKFGSG-TGGNQRDIVAEAQLPIAVVNGRDEPFVEL 224 (279)
T ss_dssp HHHHHHHHHHHHCSSC-------CHHHHHHHHHSCH-HHHHHHHHHHHHT-CBCCHHHHHHHCCSCEEEEEETTCSSBCH
T ss_pred HHHHHHHHHhhccCcc-------cHHHHHHHHhhhc-cchHHHHHHhhcc-CCchHHHHHHhcCCCEEEEEcCCCcccch
Confidence 1111222333332221 2222222211110 0111111222222 23466677889999999999999999843
Q ss_pred --HHHHH-HhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 259 --AVHMT-SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 259 --~~~~~-~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
...+. +.+++ +++++++++||+++.++|+++++.|.+||++..
T Consensus 225 ~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 270 (279)
T 4g9e_A 225 DFVSKVKFGNLWE--GKTHVIDNAGHAPFREAPAEFDAYLARFIRDCT 270 (279)
T ss_dssp HHHTTCCCSSBGG--GSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCC--CeEEEECCCCcchHHhCHHHHHHHHHHHHHHhh
Confidence 23344 45555 899999999999999999999999999999874
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=234.47 Aligned_cols=261 Identities=17% Similarity=0.190 Sum_probs=175.9
Q ss_pred CCCCCCCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC-CCCCCC
Q 018947 14 ETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAA 92 (348)
Q Consensus 14 ~~~~~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~ 92 (348)
...+...+..++.+++++++|...|++++|+|||+||++++...|... ...+.+||+|+++|+||| |.|..+
T Consensus 39 ~~~~~~~~~~~v~~~~~~~~~~~~g~~~~~~vv~lHG~~~~~~~~~~~-------~~~L~~g~~vi~~D~~G~gG~s~~~ 111 (306)
T 2r11_A 39 SLWPVRCKSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSSTMWYPN-------IADWSSKYRTYAVDIIGDKNKSIPE 111 (306)
T ss_dssp TTCCSCCEEEEECCTTEEEEEEEESCTTSCEEEEECCTTTCGGGGTTT-------HHHHHHHSEEEEECCTTSSSSCEEC
T ss_pred HhCCCCcceEEEecCCceEEEEeeCCCCCCeEEEECCCCCCHHHHHHH-------HHHHhcCCEEEEecCCCCCCCCCCC
Confidence 344555677889999999999999977889999999999988765322 234445999999999999 887643
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHH
Q 018947 93 ISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (348)
Q Consensus 93 ~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (348)
...++++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++.................
T Consensus 112 ----~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--- 184 (306)
T 2r11_A 112 ----NVSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALG--- 184 (306)
T ss_dssp ----SCCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHT---
T ss_pred ----CCCCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhH---
Confidence 2458999999999999999999999999999999999999999999999999999887653322211111100
Q ss_pred HhhccchhHHHHHHHhhhcccccCCCCCCChHHHHH---HHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEe
Q 018947 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQA---CRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 249 (348)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~ 249 (348)
.........+. .++...... ....... ....+. .....+...... .........+.++++|+|+++
T Consensus 185 ---~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~l~~i~~P~lii~ 253 (306)
T 2r11_A 185 ---LTASNGVETFL-NWMMNDQNV-----LHPIFVKQFKAGVMWQ-DGSRNPNPNADG-FPYVFTDEELRSARVPILLLL 253 (306)
T ss_dssp ---TTSTTHHHHHH-HHHTTTCCC-----SCHHHHHHHHHHHHCC-SSSCCCCCCTTS-SSCBCCHHHHHTCCSCEEEEE
T ss_pred ---HHHHHHHHHHH-HHhhCCccc-----cccccccccHHHHHHH-HhhhhhhhhccC-CCCCCCHHHHhcCCCCEEEEE
Confidence 00011111122 222211110 1111111 000000 000000000000 001134456788999999999
Q ss_pred cCCCCCCc--hHHHH-HHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 250 GESSPFHS--EAVHM-TSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 250 g~~D~~~~--~~~~~-~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
|++|.+++ ...+. .+.+++ +++++++++||+++.++|+++++.|.+||++
T Consensus 254 G~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 254 GEHEVIYDPHSALHRASSFVPD--IEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp ETTCCSSCHHHHHHHHHHHSTT--CEEEEETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred eCCCcccCHHHHHHHHHHHCCC--CEEEEeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence 99999884 23333 345665 9999999999999999999999999999964
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=235.65 Aligned_cols=242 Identities=14% Similarity=0.102 Sum_probs=156.4
Q ss_pred eeEEEEccCCCCC-eEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018947 31 SLSVTIYGDQDKP-ALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (348)
Q Consensus 31 ~l~~~~~g~~~~p-~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl 109 (348)
+++|...| ++| +|||+||++++...|... ...+.++|+|+++|+||||.|..+ ..++++++++++
T Consensus 3 ~l~~~~~G--~g~~~vvllHG~~~~~~~w~~~-------~~~L~~~~~vi~~Dl~G~G~S~~~-----~~~~~~~~~~~l 68 (258)
T 1m33_A 3 NIWWQTKG--QGNVHLVLLHGWGLNAEVWRCI-------DEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMAEAV 68 (258)
T ss_dssp CCCEEEEC--CCSSEEEEECCTTCCGGGGGGT-------HHHHHTTSEEEEECCTTSTTCCSC-----CCCCHHHHHHHH
T ss_pred ceEEEEec--CCCCeEEEECCCCCChHHHHHH-------HHHhhcCcEEEEeeCCCCCCCCCC-----CCcCHHHHHHHH
Confidence 57888888 457 999999999998765432 345667999999999999999754 357888888776
Q ss_pred HHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC---hH---HHHHHHHHHHHHHhhccchhHHH
Q 018947 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---WT---EWLYNKVMSNLLYYYGMCGVVKE 183 (348)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~ 183 (348)
.+. ++ ++++|+||||||.+++.+|.++|++|+++|++++.+.... +. .... ..+...+. ... .
T Consensus 69 ~~~---l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~-~ 137 (258)
T 1m33_A 69 LQQ---AP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVL-AGFQQQLS-----DDQ-Q 137 (258)
T ss_dssp HTT---SC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHH-HHHHHHHH-----HHH-H
T ss_pred HHH---hC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHH-HHHHHHHh-----ccH-H
Confidence 544 45 7999999999999999999999999999999987643211 10 0000 00000000 000 1
Q ss_pred HHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc---hhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--h
Q 018947 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ---SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--E 258 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~ 258 (348)
.....++........ ......+.+........ ...+...+..+.. .+....+.++++|+++|+|++|.+++ .
T Consensus 138 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~~~~~~~ 214 (258)
T 1m33_A 138 RTVERFLALQTMGTE--TARQDARALKKTVLALPMPEVDVLNGGLEILKT-VDLRQPLQNVSMPFLRLYGYLDGLVPRKV 214 (258)
T ss_dssp HHHHHHHHTTSTTST--THHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH-CCCTTGGGGCCSCEEEEEETTCSSSCGGG
T ss_pred HHHHHHHHHHhcCCc--cchhhHHHHHHHHHhccCCcHHHHHHHHHHHHh-CCHHHHHhhCCCCEEEEeecCCCCCCHHH
Confidence 111122111110000 01122222222222111 1112222222211 24455678899999999999999883 3
Q ss_pred HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 259 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.+.+.+++ +++++++++||++++|+|+++++.|.+|+++.
T Consensus 215 ~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 215 VPMLDKLWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp CC-CTTTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred HHHHHHhCcc--ceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 4456666766 89999999999999999999999999999875
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=233.71 Aligned_cols=265 Identities=10% Similarity=0.062 Sum_probs=173.3
Q ss_pred cceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
..++..+|.+++|...| .+|+|||+||++++...|... ...+.++|+|+++|+||||.|..+.......++
T Consensus 11 ~~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~~~~~-------~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 81 (302)
T 1mj5_A 11 KKFIEIKGRRMAYIDEG--TGDPILFQHGNPTSSYLWRNI-------MPHCAGLGRLIACDLIGMGDSDKLDPSGPERYA 81 (302)
T ss_dssp CEEEEETTEEEEEEEES--CSSEEEEECCTTCCGGGGTTT-------GGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSC
T ss_pred ceEEEECCEEEEEEEcC--CCCEEEEECCCCCchhhhHHH-------HHHhccCCeEEEEcCCCCCCCCCCCCCCccccc
Confidence 45677899999999999 479999999999988765322 255566799999999999999855221233489
Q ss_pred HHHHHHHHHHHHHHcCC-CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHH--HHHHHHHHHHHhhccc
Q 018947 102 VDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW--LYNKVMSNLLYYYGMC 178 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 178 (348)
++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++......+... ........ +......
T Consensus 82 ~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 160 (302)
T 1mj5_A 82 YAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQA-FRSQAGE 160 (302)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHH-HHSTTHH
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHH-Hhccchh
Confidence 99999999999999999 99999999999999999999999999999999987753211100 00000000 0000000
Q ss_pred hhH--HHHHHHhhhcccccCCCCCCChHHHHHHHHHHhh--hchhhHHHHHHHHc----------CCccHHhhhccCCcc
Q 018947 179 GVV--KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDE--RQSSNVWHFLEAIN----------GRPDISEGLRKLQCR 244 (348)
Q Consensus 179 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----------~~~~~~~~l~~i~~P 244 (348)
... ...++..++....... ...+....+...+.. .........+..+. ...+....+.++++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 237 (302)
T 1mj5_A 161 ELVLQDNVFVEQVLPGLILRP---LSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIP 237 (302)
T ss_dssp HHHTTTCHHHHTHHHHTSSSC---CCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSC
T ss_pred hhhcChHHHHHHHHHhcCccc---CCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCC
Confidence 000 0111222221111000 023333333222211 01111111111110 002345567889999
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
+|+|+|++|.+++ ..+.+.+.+++ +++++ ++||+++.++|+++++.|.+|+++..
T Consensus 238 ~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~ 294 (302)
T 1mj5_A 238 KLFINAEPGALTTGRMRDFCRTWPNQ---TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLR 294 (302)
T ss_dssp EEEEEEEECSSSSHHHHHHHTTCSSE---EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHS
T ss_pred eEEEEeCCCCCCChHHHHHHHHhcCC---ceEEe-cCcCcccccCHHHHHHHHHHHHHhhc
Confidence 9999999999984 44456666654 78888 99999999999999999999998763
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=236.87 Aligned_cols=255 Identities=14% Similarity=0.128 Sum_probs=169.8
Q ss_pred eeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
++++++.+++|...| ++|+|||+||++++...|.... ..+.. .||+|+++|+||||.|..+. . +++
T Consensus 5 ~~~~~g~~l~y~~~g--~~~~vv~lhG~~~~~~~~~~~~------~~l~~~~g~~v~~~d~~G~G~s~~~~----~-~~~ 71 (272)
T 3fsg_A 5 KEYLTRSNISYFSIG--SGTPIIFLHGLSLDKQSTCLFF------EPLSNVGQYQRIYLDLPGMGNSDPIS----P-STS 71 (272)
T ss_dssp CCEECTTCCEEEEEC--CSSEEEEECCTTCCHHHHHHHH------TTSTTSTTSEEEEECCTTSTTCCCCS----S-CSH
T ss_pred EEEecCCeEEEEEcC--CCCeEEEEeCCCCcHHHHHHHH------HHHhccCceEEEEecCCCCCCCCCCC----C-CCH
Confidence 567899999999999 6789999999999987654222 34333 59999999999999997542 2 899
Q ss_pred HHHHHHHHHHHHH-cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHH-HHHHhhccchh
Q 018947 103 DDLADQIAEVLNH-FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS-NLLYYYGMCGV 180 (348)
Q Consensus 103 ~~~~~dl~~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 180 (348)
+++++|+.+++++ ++.++++++||||||.+++.+|.++|++|+++|++++................. .......+...
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T 3fsg_A 72 DNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKE 151 (272)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGG
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHH
Confidence 9999999999999 888999999999999999999999999999999999876432211000000000 00000000000
Q ss_pred HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh---chhhHHHHHHHHcC-CccHHhhhccCCccEEEEecCCCCCC
Q 018947 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER---QSSNVWHFLEAING-RPDISEGLRKLQCRSLIFVGESSPFH 256 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~l~~i~~Pvl~i~g~~D~~~ 256 (348)
....+....... .......+....... ....+...+..... ..+....+.++++|+++|+|++|.++
T Consensus 152 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 222 (272)
T 3fsg_A 152 YFADFLSMNVII---------NNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVV 222 (272)
T ss_dssp GHHHHHHHCSEE---------SHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTT
T ss_pred HHHHHHHHhccC---------CCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcC
Confidence 001111111100 122222222211111 11111111111111 11222245789999999999999998
Q ss_pred --chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 257 --SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.....+.+.+++ +++++++++||+++.++|+++++.|.+||+++
T Consensus 223 ~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 268 (272)
T 3fsg_A 223 GYQEQLKLINHNEN--GEIVLLNRTGHNLMIDQREAVGFHFDLFLDEL 268 (272)
T ss_dssp CSHHHHHHHTTCTT--EEEEEESSCCSSHHHHTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCC--CeEEEecCCCCCchhcCHHHHHHHHHHHHHHh
Confidence 355567787776 89999999999999999999999999999876
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=232.54 Aligned_cols=251 Identities=14% Similarity=0.115 Sum_probs=177.9
Q ss_pred eeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018947 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (348)
Q Consensus 31 ~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~ 110 (348)
+++|...| +++|+|||+||++++...|... ...+.+||+|+++|+||||.|..+........+++++++|+.
T Consensus 18 ~~~~~~~g-~~~~~vv~lHG~~~~~~~~~~~-------~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 89 (282)
T 3qvm_A 18 RNNINITG-GGEKTVLLAHGFGCDQNMWRFM-------LPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVE 89 (282)
T ss_dssp HTTCEEEE-CSSCEEEEECCTTCCGGGGTTT-------HHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHH
T ss_pred hcceeecC-CCCCeEEEECCCCCCcchHHHH-------HHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHH
Confidence 45666677 3448999999999988655322 345556999999999999999865322224459999999999
Q ss_pred HHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh--------HHHHHHHHHHHHHHhhccchhHH
Q 018947 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW--------TEWLYNKVMSNLLYYYGMCGVVK 182 (348)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 182 (348)
+++++++.++++++|||+||.+++.+|.++|++|+++|++++....... ....... ....... ..... .
T Consensus 90 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~ 166 (282)
T 3qvm_A 90 EILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEE-LINLMDK-NYIGW-A 166 (282)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHH-HHHHHHH-CHHHH-H
T ss_pred HHHHHcCCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHH-HHHHHhc-chhhH-H
Confidence 9999999999999999999999999999999999999999987653211 1111011 1111100 11111 1
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHH
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 260 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~ 260 (348)
.......+.... .......+...+..........+...... .+....+.++++|+++++|++|.++ ....
T Consensus 167 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 238 (282)
T 3qvm_A 167 NYLAPLVMGASH-------SSELIGELSGSFCTTDPIVAKTFAKATFF-SDYRSLLEDISTPALIFQSAKDSLASPEVGQ 238 (282)
T ss_dssp HHHHHHHHCTTS-------CHHHHHHHHHHHHHSCHHHHHHHHHHHHS-CBCGGGGGGCCSCEEEEEEEECTTCCHHHHH
T ss_pred HHHHhhccCCcc-------chhhHHHHHHHHhcCCcHHHHHHHHHHhc-ccHHHHHhcCCCCeEEEEeCCCCcCCHHHHH
Confidence 122222222211 44555555555554444444444444333 4566778899999999999999998 3555
Q ss_pred HHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 261 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.+.+++ .++++++++||+++.++|+++++.|.+||++.
T Consensus 239 ~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 278 (282)
T 3qvm_A 239 YMAENIPN--SQLELIQAEGHCLHMTDAGLITPLLIHFIQNN 278 (282)
T ss_dssp HHHHHSSS--EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHC
T ss_pred HHHHhCCC--CcEEEecCCCCcccccCHHHHHHHHHHHHHhc
Confidence 67888877 89999999999999999999999999999886
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-32 Score=230.45 Aligned_cols=261 Identities=14% Similarity=0.139 Sum_probs=175.7
Q ss_pred CCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 19 ~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
..++.++..+|.+++|..+|++++|+|||+||++++...|. ..+..+..+||+|+++|+||+|.|..+. ...
T Consensus 3 ~~~~~~~~~~g~~l~~~~~g~~~~~~vv~~hG~~~~~~~~~------~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~ 74 (286)
T 3qit_A 3 AMEEKFLEFGGNQICLCSWGSPEHPVVLCIHGILEQGLAWQ------EVALPLAAQGYRVVAPDLFGHGRSSHLE--MVT 74 (286)
T ss_dssp CCEEEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEEECCTTSTTSCCCS--SGG
T ss_pred hhhhheeecCCceEEEeecCCCCCCEEEEECCCCcccchHH------HHHHHhhhcCeEEEEECCCCCCCCCCCC--CCC
Confidence 34677889999999999999888999999999999887653 2335666779999999999999997542 235
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhc--
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG-- 176 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 176 (348)
.++++++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++...............+...+....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (286)
T 3qit_A 75 SYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSST 154 (286)
T ss_dssp GCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhcc
Confidence 689999999999999999999999999999999999999999999999999998877543321000011111111000
Q ss_pred -----cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchh---------hHHHHHHHHc----CCccHHhhh
Q 018947 177 -----MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSS---------NVWHFLEAIN----GRPDISEGL 238 (348)
Q Consensus 177 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~l 238 (348)
.................. .......+.......... ........+. ...+....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T 3qit_A 155 PQHPIFPDVATAASRLRQAIPSL-------SEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEML 227 (286)
T ss_dssp CCCCCBSSHHHHHHHHHHHSTTS-------CHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHH
T ss_pred ccccccccHHHHHHHhhcCCccc-------CHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHH
Confidence 000100000000000000 222332222221111000 0000000000 112445567
Q ss_pred ccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHH
Q 018947 239 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEY 297 (348)
Q Consensus 239 ~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 297 (348)
.++++|+++|+|++|.++ .....+.+.+++ ++++++++ ||++++++|+++++.|.+
T Consensus 228 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 228 KSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQ--AKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp HHCCSCEEEEEETTCCSSCHHHHHHHHHHSTT--SEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred hccCCCeEEEEeCCCcccCHHHHHHHHHHCCC--CeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 889999999999999998 345567888877 89999998 999999999999998864
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=237.81 Aligned_cols=271 Identities=11% Similarity=0.075 Sum_probs=174.3
Q ss_pred ccceeecCCceeEEEEccCC--CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~--~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
+..++.++|.+++|...|++ ++|+|||+||++++...|.. .+..+..+||+|+++|+||||.|..+. ...
T Consensus 4 ~~~~~~~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~------~~~~l~~~g~~vi~~d~~g~g~s~~~~--~~~ 75 (356)
T 2e3j_A 4 VHRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRH------QIPALAGAGYRVVAIDQRGYGRSSKYR--VQK 75 (356)
T ss_dssp CEEEEEETTEEEEEEEECCTTCCSCEEEEECCTTCCGGGGTT------THHHHHHTTCEEEEECCTTSTTSCCCC--SGG
T ss_pred eEEEEccCCeEEEEEEecCCCCCCCEEEEECCCCCcHHHHHH------HHHHHHHcCCEEEEEcCCCCCCCCCCC--ccc
Confidence 45567789999999999964 67899999999998876532 224555679999999999999987542 123
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCC----------CCC---ChHHHHHH
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC----------KAP---SWTEWLYN 165 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~----------~~~---~~~~~~~~ 165 (348)
.++++++++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++.. ... ........
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (356)
T 2e3j_A 76 AYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLE 155 (356)
T ss_dssp GGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSSCCSCHHHHHHS
T ss_pred ccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCcccccchHHHHH
Confidence 57999999999999999999999999999999999999999999999999999865 111 01110000
Q ss_pred H------HHHHHHHhhc-----cchhHHHHHHHhhhcc----------------------------------------cc
Q 018947 166 K------VMSNLLYYYG-----MCGVVKELLLKRYFSK----------------------------------------EV 194 (348)
Q Consensus 166 ~------~~~~~~~~~~-----~~~~~~~~~~~~~~~~----------------------------------------~~ 194 (348)
. .....+.... +.... ...+..++.. ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (356)
T 2e3j_A 156 LAGPGRVWYQDYFAVQDGIITEIEEDL-RGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARL 234 (356)
T ss_dssp SSCSSEEEHHHHHHHCSHHHHHHHTTH-HHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTSTTEEETTSCG
T ss_pred hhcCCcHHHHHHHhcccchHHHHHHhH-HHHHHHHhhccccchhhccchhhcccccccccccccccccccccccccchhh
Confidence 0 0000000000 00000 1111111110 00
Q ss_pred cC-------CCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHh--hhccCCccEEEEecCCCCCCc----hHHH
Q 018947 195 RG-------NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISE--GLRKLQCRSLIFVGESSPFHS----EAVH 261 (348)
Q Consensus 195 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~Pvl~i~g~~D~~~~----~~~~ 261 (348)
.. ............+...+..........++.......+... .+.++++|+|+|+|++|.+++ ..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~p~~~~~~~~ 314 (356)
T 2e3j_A 235 KDAFVYPETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQAIER 314 (356)
T ss_dssp GGGCCCCSSCCTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTSCCCSCEEEEEETTCHHHHHTHHHHHT
T ss_pred hhcccccccccccCCHHHHHHHHHHhcccCCchhHHHHHhcccChhhhHhhcCCccCCCEEEEecCCCccccccHHHHHH
Confidence 00 0000012233333333222221111111111100001111 246899999999999999875 2345
Q ss_pred HHHhhccCCc-EEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 262 MTSKIDRRYS-ALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 262 ~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+.+.+++ + ++++++++||+++.|+|+++++.|.+||+++
T Consensus 315 l~~~~p~--~~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 315 AHEVMPN--YRGTHMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp HHHHCTT--EEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred HHHhCcC--cceEEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 7777776 7 9999999999999999999999999999876
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-31 Score=227.88 Aligned_cols=261 Identities=12% Similarity=0.083 Sum_probs=163.4
Q ss_pred ccceeec-CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
++.++.+ +|.+++|...|++++++|||+||+++++..+. +. ..+..++|+||++|+||||.|+.+. ....
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~g~~vvllHG~~~~~~~~~----~~---~~~~~~~~~vi~~D~~G~G~S~~~~--~~~~ 85 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPH----HR---QLFDPERYKVLLFDQRGCGRSRPHA--SLDN 85 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCCGG----GG---GGSCTTTEEEEEECCTTSTTCBSTT--CCTT
T ss_pred eeeEEEcCCCcEEEEEEcCCCCCCcEEEECCCCCcccchh----hh---hhccccCCeEEEECCCCCCCCCCCc--cccc
Confidence 4556777 67799999999777788999999876543211 10 1222479999999999999997431 1245
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHH--------HHHHHH
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN--------KVMSNL 171 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--------~~~~~~ 171 (348)
++++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++.........+... ......
T Consensus 86 ~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (317)
T 1wm1_A 86 NTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERV 165 (317)
T ss_dssp CSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999876543211111100 000000
Q ss_pred HHhhccch--hHHHHHHHhhhcccccCCCCCCChHHHH----HHHHHHh---hh--ch-------hhHHHH--------H
Q 018947 172 LYYYGMCG--VVKELLLKRYFSKEVRGNAQVPESDIVQ----ACRRLLD---ER--QS-------SNVWHF--------L 225 (348)
Q Consensus 172 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~--~~-------~~~~~~--------~ 225 (348)
........ .....+...++.. ...... .+..... .. .. ..+... +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (317)
T 1wm1_A 166 LSILSDDERKDVIAAYRQRLTSA---------DPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYF 236 (317)
T ss_dssp HTTSCTTGGGCHHHHHHHHHTCS---------CHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHH
T ss_pred HhhccchhhcchHHHHHhhhcCC---------CccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhh
Confidence 00000000 0001111111110 010000 0000000 00 00 000000 0
Q ss_pred H--HHcCCcc-HHhhhccCC-ccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCcccc-ChhhhHHHHHHH
Q 018947 226 E--AINGRPD-ISEGLRKLQ-CRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEE-QPHAMLIPMEYF 298 (348)
Q Consensus 226 ~--~~~~~~~-~~~~l~~i~-~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~f 298 (348)
. .+....+ ....+.+++ +|+|+|+|++|.+++ ....+.+.+++ +++++++++||+++.+ .++++.+.|.+|
T Consensus 237 ~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~--~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 314 (317)
T 1wm1_A 237 THLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE--AELHIVEGAGHSYDEPGILHQLMIATDRF 314 (317)
T ss_dssp HTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTT--SEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred hcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCC--ceEEEECCCCCCCCCcchHHHHHHHHHHH
Confidence 0 0111112 455677785 999999999999983 45568888887 8999999999998764 688999999999
Q ss_pred Hhh
Q 018947 299 LMG 301 (348)
Q Consensus 299 l~~ 301 (348)
+.+
T Consensus 315 ~~~ 317 (317)
T 1wm1_A 315 AGK 317 (317)
T ss_dssp TC-
T ss_pred hcC
Confidence 853
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=237.98 Aligned_cols=227 Identities=10% Similarity=0.093 Sum_probs=154.8
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc--CC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF--GL 118 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l--~~ 118 (348)
+++.|||+||++++...|. ..+..+.++||+|+++|+||||.|... ...++++++++|+.++++.+ +.
T Consensus 50 ~~~~VlllHG~~~s~~~~~------~la~~La~~Gy~Via~Dl~GhG~S~~~----~~~~~~~~~~~d~~~~~~~l~~~~ 119 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQSMR------FLAEGFARAGYTVATPRLTGHGTTPAE----MAASTASDWTADIVAAMRWLEERC 119 (281)
T ss_dssp SSEEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEECCCTTSSSCHHH----HHTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCceEEEECCCCCCHHHHH------HHHHHHHHCCCEEEEECCCCCCCCCcc----ccCCCHHHHHHHHHHHHHHHHhCC
Confidence 4567999999999886643 333566678999999999999998532 23578999999999999877 56
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 198 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (348)
++++++||||||.+++.+|.++|++|+++|++++............ ... ....... . .+........
T Consensus 120 ~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~-----~~~~~~~-----~-~~~~~~~~~~ 186 (281)
T 4fbl_A 120 DVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAAL--AFN-----PDAPAEL-----P-GIGSDIKAEG 186 (281)
T ss_dssp SEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHH--HTC-----TTCCSEE-----E-CCCCCCSSTT
T ss_pred CeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHH--HHh-----HhhHHhh-----h-cchhhhhhHH
Confidence 8999999999999999999999999999999999877654322110 000 0000000 0 0000000000
Q ss_pred CCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEe
Q 018947 199 QVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEV 276 (348)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~ 276 (348)
.... ................. ......+.++++|+|+|+|++|.++ ...+.+.+.+++.+.+++++
T Consensus 187 ---~~~~------~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~ 254 (281)
T 4fbl_A 187 ---VKEL------AYPVTPVPAIKHLITIG---AVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWL 254 (281)
T ss_dssp ---CCCC------CCSEEEGGGHHHHHHHH---HHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEE
T ss_pred ---HHHh------hhccCchHHHHHHHHhh---hhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEE
Confidence 0000 00000001111111111 1234567889999999999999998 35567888888766899999
Q ss_pred cCCCCCcccc-ChhhhHHHHHHHHhhc
Q 018947 277 QACGSMVTEE-QPHAMLIPMEYFLMGY 302 (348)
Q Consensus 277 ~~~gH~~~~e-~p~~~~~~i~~fl~~~ 302 (348)
+++||+++.| +++++.+.|.+||+++
T Consensus 255 ~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 255 ENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp SSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred CCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 9999999887 5899999999999874
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=222.10 Aligned_cols=233 Identities=10% Similarity=0.083 Sum_probs=152.6
Q ss_pred CceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018947 29 HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (348)
Q Consensus 29 ~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d 108 (348)
+..++|. + ++|+|||+||++++...|.. ....+.++||+|+++|+||||.|... ...++++++++|
T Consensus 7 ~~~~~~~--~--~~~~vvllHG~~~~~~~~~~------~~~~L~~~g~~vi~~D~~GhG~s~~~----~~~~~~~~~~~d 72 (247)
T 1tqh_A 7 PKPFFFE--A--GERAVLLLHGFTGNSADVRM------LGRFLESKGYTCHAPIYKGHGVPPEE----LVHTGPDDWWQD 72 (247)
T ss_dssp CCCEEEC--C--SSCEEEEECCTTCCTHHHHH------HHHHHHHTTCEEEECCCTTSSSCHHH----HTTCCHHHHHHH
T ss_pred CCCeeeC--C--CCcEEEEECCCCCChHHHHH------HHHHHHHCCCEEEecccCCCCCCHHH----hcCCCHHHHHHH
Confidence 3445444 4 46889999999998876532 22344467999999999999976421 124688888777
Q ss_pred HHH---HHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHH
Q 018947 109 IAE---VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185 (348)
Q Consensus 109 l~~---~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (348)
+.+ ++++++.++++|+||||||.+++.+|.++| |+++|+++++.......... ....... ...
T Consensus 73 ~~~~~~~l~~~~~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~--~~~~~~~----------~~~ 138 (247)
T 1tqh_A 73 VMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMY--EGVLEYA----------REY 138 (247)
T ss_dssp HHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHH--HHHHHHH----------HHH
T ss_pred HHHHHHHHHHcCCCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhh--HHHHHHH----------HHh
Confidence 654 667788899999999999999999999999 99999987655432221111 0000000 000
Q ss_pred HHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHH
Q 018947 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMT 263 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~ 263 (348)
.. ... . ..+................... +..+. .+..+.+.++++|+|+|+|++|.++ ...+.++
T Consensus 139 ~~-~~~---~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~ 205 (247)
T 1tqh_A 139 KK-REG---K------SEEQIEQEMEKFKQTPMKTLKA-LQELI--ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIY 205 (247)
T ss_dssp HH-HHT---C------CHHHHHHHHHHHTTSCCTTHHH-HHHHH--HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHH
T ss_pred hc-ccc---c------chHHHHhhhhcccCCCHHHHHH-HHHHH--HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHH
Confidence 00 000 0 1111111111111111111111 11111 2455678899999999999999988 4566788
Q ss_pred HhhccCCcEEEEecCCCCCccccC-hhhhHHHHHHHHhhc
Q 018947 264 SKIDRRYSALVEVQACGSMVTEEQ-PHAMLIPMEYFLMGY 302 (348)
Q Consensus 264 ~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~~ 302 (348)
+.+++..+++++++++||+++.|+ |+++++.|.+||++.
T Consensus 206 ~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 206 NEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp HHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred HhcCCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 888864579999999999999975 799999999999875
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-32 Score=228.69 Aligned_cols=237 Identities=10% Similarity=0.095 Sum_probs=147.3
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-C
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~ 118 (348)
+.+++|||+||++.+...|.. .+..+.++||+||++|+||||.|+.+. ...++++++++|+.+++++++ .
T Consensus 8 ~~g~~vvllHG~~~~~~~w~~------~~~~L~~~g~~via~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~ 78 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWIWYK------LKPLLESAGHKVTAVDLSAAGINPRRL---DEIHTFRDYSEPLMEVMASIPPD 78 (264)
T ss_dssp -CCCEEEEECCTTCCGGGGTT------HHHHHHHTTCEEEEECCTTSTTCSCCG---GGCCSHHHHHHHHHHHHHHSCTT
T ss_pred CCCCeEEEECCCccccchHHH------HHHHHHhCCCEEEEeecCCCCCCCCCc---ccccCHHHHHHHHHHHHHHhCCC
Confidence 467899999999988766532 223444679999999999999996431 234799999999999999997 5
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC-hHHHHHHHHHHHHHHhhccch----------------hH
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-WTEWLYNKVMSNLLYYYGMCG----------------VV 181 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------------~~ 181 (348)
++++|+||||||.+++.+|.++|++|+++|++++...... ...... ...........+.. ..
T Consensus 79 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 2wfl_A 79 EKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPF-EKYNEKCPADMMLDSQFSTYGNPENPGMSMIL 157 (264)
T ss_dssp CCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHH-HHHHHHSCTTTTTTCEEEEESCTTSCEEEEEC
T ss_pred CCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHH-HHhhhcCcchhhhhhhhhhccCCCCCcchhhh
Confidence 8999999999999999999999999999999997532211 110000 00000000000000 00
Q ss_pred HHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hH
Q 018947 182 KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EA 259 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~ 259 (348)
........+.... ..+... +......... .... .+....... .....++|+|+|+|++|.+++ ..
T Consensus 158 ~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~-~~~~---~~~~~~~~~-~~~~~~~P~l~i~G~~D~~~~~~~~ 224 (264)
T 2wfl_A 158 GPQFMALKMFQNC-------SVEDLE-LAKMLTRPGS-LFFQ---DLAKAKKFS-TERYGSVKRAYIFCNEDKSFPVEFQ 224 (264)
T ss_dssp CHHHHHHHTSTTS-------CHHHHH-HHHHHCCCEE-CCHH---HHTTSCCCC-TTTGGGSCEEEEEETTCSSSCHHHH
T ss_pred hHHHHHHHHhcCC-------CHHHHH-HHHhccCCCc-cccc---ccccccccC-hHHhCCCCeEEEEeCCcCCCCHHHH
Confidence 0000100000000 111111 1111100000 0000 010000110 001136899999999999883 45
Q ss_pred HHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 260 VHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+.+++.+++ +++++++++||++++|+|+++++.|.+|+++
T Consensus 225 ~~~~~~~p~--~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~ 264 (264)
T 2wfl_A 225 KWFVESVGA--DKVKEIKEADHMGMLSQPREVCKCLLDISDS 264 (264)
T ss_dssp HHHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHHHHHC-
T ss_pred HHHHHhCCC--ceEEEeCCCCCchhhcCHHHHHHHHHHHhhC
Confidence 567888887 8999999999999999999999999999853
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-31 Score=229.37 Aligned_cols=257 Identities=16% Similarity=0.128 Sum_probs=176.6
Q ss_pred CccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 20 GKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
....++.+++.+++|...|+ +|+|||+||++++...|.. . ...+.++|+|+++|+||||.|..+ ...
T Consensus 48 ~~~~~~~~~~~~~~~~~~g~--~p~vv~lhG~~~~~~~~~~------~-~~~L~~~~~v~~~D~~G~G~S~~~----~~~ 114 (314)
T 3kxp_A 48 FISRRVDIGRITLNVREKGS--GPLMLFFHGITSNSAVFEP------L-MIRLSDRFTTIAVDQRGHGLSDKP----ETG 114 (314)
T ss_dssp CEEEEEECSSCEEEEEEECC--SSEEEEECCTTCCGGGGHH------H-HHTTTTTSEEEEECCTTSTTSCCC----SSC
T ss_pred cceeeEEECCEEEEEEecCC--CCEEEEECCCCCCHHHHHH------H-HHHHHcCCeEEEEeCCCcCCCCCC----CCC
Confidence 35667888999999999984 8899999999988765431 2 345566899999999999999733 346
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccch
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (348)
++++++++|+.+++++++.++++++|||+||.+++.+|.++|++|+++|++++................... ......
T Consensus 115 ~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 192 (314)
T 3kxp_A 115 YEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAG--SQLFED 192 (314)
T ss_dssp CSHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTT--CSCBSS
T ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhc--hhhhcC
Confidence 899999999999999999999999999999999999999999999999999988765433222111111000 000000
Q ss_pred hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh--------chhhHHHHHHHHcCCccHHhhhccCCccEEEEecC
Q 018947 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER--------QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 251 (348)
. ..... ++....... ............... .............. .+....+.++++|+|+++|+
T Consensus 193 ~--~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~Lii~G~ 264 (314)
T 3kxp_A 193 I--KAVEA-YLAGRYPNI----PADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLR-SDLVPAYRDVTKPVLIVRGE 264 (314)
T ss_dssp H--HHHHH-HHHHHSTTS----CHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTT-SCCHHHHHHCCSCEEEEEET
T ss_pred H--HHHHH-HHHhhcccC----chHHHHHHhhhhhcccccccccccChhhhhhhccccC-cchhhHhhcCCCCEEEEecC
Confidence 0 11111 111000000 222222222111100 00011111111111 25667788999999999999
Q ss_pred CCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 252 SSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+|.++ .....+.+.+++ +++++++++||+++.++|+++++.|.+||++
T Consensus 265 ~D~~~~~~~~~~~~~~~~~--~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 265 SSKLVSAAALAKTSRLRPD--LPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp TCSSSCHHHHHHHHHHCTT--SCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred CCccCCHHHHHHHHHhCCC--ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 99988 355567888876 8999999999999999999999999999974
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-32 Score=228.56 Aligned_cols=238 Identities=11% Similarity=0.065 Sum_probs=149.3
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~~ 119 (348)
.+++|||+||++.+...|.. .+..+.++||+||++|+||||.|+.+. ...++++++++|+.+++++++ .+
T Consensus 3 ~~~~vvllHG~~~~~~~w~~------~~~~L~~~g~rVia~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~~ 73 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYK------LKPLLEAAGHKVTALDLAASGTDLRKI---EELRTLYDYTLPLMELMESLSADE 73 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTT------HHHHHHHTTCEEEECCCTTSTTCCCCG---GGCCSHHHHHHHHHHHHHTSCSSS
T ss_pred CCCeEEEECCCCCCcchHHH------HHHHHHhCCCEEEEecCCCCCCCccCc---ccccCHHHHHHHHHHHHHHhccCC
Confidence 46899999999988766532 223444679999999999999996431 234799999999999999997 58
Q ss_pred ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC-hHHHHHHHHHHHHHHhhccch----------------hHH
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS-WTEWLYNKVMSNLLYYYGMCG----------------VVK 182 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------------~~~ 182 (348)
+++|+||||||++++.+|.++|++|+++|++++...... ...... ...........+.. ...
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVL-EQYNERTPAENWLDTQFLPYGSPEEPLTSMFFG 152 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHH-HHHHHTSCTTTTTTCEEEECSCTTSCCEEEECC
T ss_pred CEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHH-HHhhccCChhhHHHHHHhhccCCCCCccccccC
Confidence 999999999999999999999999999999997532211 110000 00000000000000 000
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHH
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAV 260 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~ 260 (348)
.......+.... ..+... +.......... ....+... . ... .....++|+++|+|++|.+++ ..+
T Consensus 153 ~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~-~~~~~~~~-~--~~~-~~~~~~~P~l~i~G~~D~~~p~~~~~ 219 (273)
T 1xkl_A 153 PKFLAHKLYQLC-------SPEDLA-LASSLVRPSSL-FMEDLSKA-K--YFT-DERFGSVKRVYIVCTEDKGIPEEFQR 219 (273)
T ss_dssp HHHHHHHTSTTS-------CHHHHH-HHHHHCCCBCC-CHHHHHHC-C--CCC-TTTGGGSCEEEEEETTCTTTTHHHHH
T ss_pred HHHHHHHhhccC-------CHHHHH-HHHHhcCCCch-hhhhhhcc-c--ccc-hhhhCCCCeEEEEeCCccCCCHHHHH
Confidence 000000000000 111111 11111000000 00001100 0 110 001246899999999999883 445
Q ss_pred HHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 261 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
.+.+.+++ +++++++++||++++|+|+++++.|.+|+++..
T Consensus 220 ~~~~~~p~--~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 220 WQIDNIGV--TEAIEIKGADHMAMLCEPQKLCASLLEIAHKYN 260 (273)
T ss_dssp HHHHHHCC--SEEEEETTCCSCHHHHSHHHHHHHHHHHHHHCC
T ss_pred HHHHhCCC--CeEEEeCCCCCCchhcCHHHHHHHHHHHHHHhc
Confidence 67888887 899999999999999999999999999998763
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=227.90 Aligned_cols=235 Identities=10% Similarity=0.073 Sum_probs=148.1
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CCc
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LGA 120 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~~~ 120 (348)
+++|||+||++.+...|.. .+..+.+.||+|+++|+||||.|+.+. ...++++++++|+.+++++++ .++
T Consensus 3 ~~~vvllHG~~~~~~~w~~------~~~~L~~~g~~via~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~~~ 73 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHK------LKPLLEALGHKVTALDLAASGVDPRQI---EEIGSFDEYSEPLLTFLEALPPGEK 73 (257)
T ss_dssp CCEEEEECCTTCCGGGGTT------HHHHHHHTTCEEEEECCTTSTTCSCCG---GGCCSHHHHTHHHHHHHHTSCTTCC
T ss_pred CCcEEEEcCCccCcCCHHH------HHHHHHhCCCEEEEeCCCCCCCCCCCc---ccccCHHHHHHHHHHHHHhccccCC
Confidence 5789999999988766532 223444679999999999999997431 235899999999999999996 589
Q ss_pred eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC--hHHHHHHHHHHHHHHhh-c-cc------------hhHHHH
Q 018947 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYYY-G-MC------------GVVKEL 184 (348)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~-~-~~------------~~~~~~ 184 (348)
++|+||||||.+++.+|.++|++|+++|++++...... ..... ... ....... . .. ......
T Consensus 74 ~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (257)
T 3c6x_A 74 VILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVV-DKL-MEVFPDWKDTTYFTYTKDGKEITGLKLGFT 151 (257)
T ss_dssp EEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHH-HHH-HHHSCCCTTCEEEEEEETTEEEEEEECCHH
T ss_pred eEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHH-HHH-hhcCcchhhhhhhhccCCCCccccccccHH
Confidence 99999999999999999999999999999998642211 11110 000 0000000 0 00 000001
Q ss_pred HHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHH
Q 018947 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHM 262 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~ 262 (348)
.....+.... ........ ......... ....+..... . ....+ .++|+|+|+|++|.+++ ..+.+
T Consensus 152 ~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~-~~~~~~~~~~-~-~~~~~--~~~P~l~i~G~~D~~~p~~~~~~~ 218 (257)
T 3c6x_A 152 LLRENLYTLC-------GPEEYELA-KMLTRKGSL-FQNILAKRPF-F-TKEGY--GSIKKIYVWTDQDEIFLPEFQLWQ 218 (257)
T ss_dssp HHHHHTSTTS-------CHHHHHHH-HHHCCCBCC-CHHHHHHSCC-C-CTTTG--GGSCEEEEECTTCSSSCHHHHHHH
T ss_pred HHHHHHhcCC-------CHHHHHHH-HHhcCCCcc-chhhhccccc-c-Chhhc--CcccEEEEEeCCCcccCHHHHHHH
Confidence 1111110000 11111111 111000000 0001111000 0 00111 26899999999999984 45567
Q ss_pred HHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 263 TSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 263 ~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++.+++ +++++++++||++++|+|++|++.|.+|++++
T Consensus 219 ~~~~~~--~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 219 IENYKP--DKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp HHHSCC--SEEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHCCC--CeEEEeCCCCCCcccCCHHHHHHHHHHHHHhc
Confidence 888887 89999999999999999999999999999864
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-31 Score=226.26 Aligned_cols=125 Identities=14% Similarity=0.119 Sum_probs=102.6
Q ss_pred ccceeec-CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
+..++.+ ++.+++|...|++++++|||+||++++...+. . ...+ .++|+||++|+||||.|+.+. ...
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~~g~pvvllHG~~~~~~~~~--~------~~~~~~~~~~vi~~D~~G~G~S~~~~--~~~ 81 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDK--M------RRFHDPAKYRIVLFDQRGSGRSTPHA--DLV 81 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCCGG--G------GGGSCTTTEEEEEECCTTSTTSBSTT--CCT
T ss_pred ccceEEcCCCCEEEEEecCCCCCCeEEEECCCCCccccHH--H------HHhcCcCcceEEEECCCCCcCCCCCc--ccc
Confidence 4556777 67799999999777788999999876542211 1 1222 479999999999999997541 224
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
.++++++++|+.++++++++++++|+||||||.+++.+|.++|++|+++|++++...
T Consensus 82 ~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~ 138 (313)
T 1azw_A 82 DNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLL 138 (313)
T ss_dssp TCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred cccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccC
Confidence 578999999999999999999999999999999999999999999999999987654
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-31 Score=226.14 Aligned_cols=269 Identities=14% Similarity=0.098 Sum_probs=172.5
Q ss_pred CCCCccceeecCCce--eEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC
Q 018947 17 PPSGKDNLIKTSHGS--LSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (348)
Q Consensus 17 ~~~~~~~~v~~~~~~--l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 92 (348)
++..+...+..++.. ++|...++ +.+|+|||+||++++...|. ..+..+..+||+|+++|+||||.|..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~ 90 (315)
T 4f0j_A 17 AYPVHYLDFTSQGQPLSMAYLDVAPKKANGRTILLMHGKNFCAGTWE------RTIDVLADAGYRVIAVDQVGFCKSSKP 90 (315)
T ss_dssp SSCCEEEEEEETTEEEEEEEEEECCSSCCSCEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred CccceeEEEecCCCCeeEEEeecCCCCCCCCeEEEEcCCCCcchHHH------HHHHHHHHCCCeEEEeecCCCCCCCCC
Confidence 334444555566654 55555543 57789999999999887643 233556667999999999999999754
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHH---HHHHH
Q 018947 93 ISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY---NKVMS 169 (348)
Q Consensus 93 ~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~---~~~~~ 169 (348)
. ...++++++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++............ .....
T Consensus 91 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 167 (315)
T 4f0j_A 91 A---HYQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWY 167 (315)
T ss_dssp S---SCCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHH
T ss_pred C---ccccCHHHHHHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHH
Confidence 2 24689999999999999999999999999999999999999999999999999998654321100000 00000
Q ss_pred HHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHH----HHHHHcCCccHHhhhccCCccE
Q 018947 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWH----FLEAINGRPDISEGLRKLQCRS 245 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~i~~Pv 245 (348)
... ...............++....... ...................... ..... ...+....+.++++|+
T Consensus 168 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~P~ 241 (315)
T 4f0j_A 168 RRD-LQTSAEGIRQYQQATYYAGEWRPE----FDRWVQMQAGMYRGKGRESVAWNSALTYDMI-FTQPVVYELDRLQMPT 241 (315)
T ss_dssp HHH-TTCCHHHHHHHHHHHTSTTCCCGG----GHHHHHHHHHHTTSTTHHHHHHHHHHHHHHH-HHCCCGGGGGGCCSCE
T ss_pred hhc-ccCChHHHHHHHHHHHhccccCCc----hHHHHHHHHHHhhccCcchhhHHHHHhcCcc-ccchhhhhcccCCCCe
Confidence 000 001111111111111111111100 1122222222221111111110 11111 1134456688999999
Q ss_pred EEEecCCCCCCc------------------hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 246 LIFVGESSPFHS------------------EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 246 l~i~g~~D~~~~------------------~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++++|++|.+++ ....+.+.+++ +++++++++||+++.++|+++++.|.+||++.
T Consensus 242 lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 242 LLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQ--ATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp EEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTT--EEEEEETTCCSCHHHHSHHHHHHHHHHHHCC-
T ss_pred EEEEecCCCcCccccccccccccccccchhhhhHHHhhcCC--ceEEEeCCCCcchhhhCHHHHHHHHHHHhccC
Confidence 999999999874 12346666665 89999999999999999999999999999764
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-31 Score=232.44 Aligned_cols=275 Identities=12% Similarity=0.121 Sum_probs=170.6
Q ss_pred ecCCceeEEEEccCC---CCCeEEEeCCCCCChhhhcc-------ccccchhhh---hhccCCeEEEEeCCCC--CCCCC
Q 018947 26 KTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQ-------GLFFCPEAC---SLLLHNFCIYHINPPG--HEFGA 90 (348)
Q Consensus 26 ~~~~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~-------~~~~~~~~~---~~~~~g~~vi~~D~~G--~G~S~ 90 (348)
..++.+++|...|++ ++|+|||+||++++...+.. ...|...+. .++.+||+|+++|+|| ||.|.
T Consensus 27 ~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~ 106 (366)
T 2pl5_A 27 VLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSG 106 (366)
T ss_dssp EESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSS
T ss_pred cccCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCC
Confidence 345668999999964 37899999999998763100 001212221 3557899999999999 88886
Q ss_pred CCCCCCC---------CCCCHHHHHHHHHHHHHHcCCCce-eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH
Q 018947 91 AAISDDE---------PVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (348)
Q Consensus 91 ~~~~~~~---------~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (348)
....... ..++++++++|+.+++++++.+++ +|+||||||.+++.+|.++|++|+++|++++........
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 186 (366)
T 2pl5_A 107 PLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQ 186 (366)
T ss_dssp TTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHH
T ss_pred CCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCcc
Confidence 4311111 147999999999999999999998 899999999999999999999999999999987654322
Q ss_pred HHHHHHHHHHHHHhh-c-----c----c-------------hhHHHHHHHhhhcccccCCCCCCChHHHHHHHHH-----
Q 018947 161 EWLYNKVMSNLLYYY-G-----M----C-------------GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRL----- 212 (348)
Q Consensus 161 ~~~~~~~~~~~~~~~-~-----~----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 212 (348)
.... ......+... . + . .......+..++................+.+...
T Consensus 187 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (366)
T 2pl5_A 187 IAFN-EVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESF 265 (366)
T ss_dssp HHHH-HHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCS
T ss_pred chhh-HHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhh
Confidence 1111 1111100000 0 0 0 0000111122222111100000000000000000
Q ss_pred HhhhchhhHHHHHHHHcCC-----ccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccC--CcEEEEe-cCCCCC
Q 018947 213 LDERQSSNVWHFLEAINGR-----PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEV-QACGSM 282 (348)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~--~~~~~~~-~~~gH~ 282 (348)
........+......+... .+....+.++++|+|+|+|++|.++ .....+.+.+++. +++++++ +++||+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 345 (366)
T 2pl5_A 266 VDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHD 345 (366)
T ss_dssp SSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSG
T ss_pred hcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCCcc
Confidence 0000111222222222110 1244578899999999999999998 3556688888832 2899999 899999
Q ss_pred ccccChhhhHHHHHHHHhh
Q 018947 283 VTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 283 ~~~e~p~~~~~~i~~fl~~ 301 (348)
++.|+|+++++.|.+||++
T Consensus 346 ~~~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 346 SFLLKNPKQIEILKGFLEN 364 (366)
T ss_dssp GGGSCCHHHHHHHHHHHHC
T ss_pred hhhcChhHHHHHHHHHHcc
Confidence 9999999999999999976
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.98 E-value=7.6e-33 Score=241.04 Aligned_cols=258 Identities=16% Similarity=0.123 Sum_probs=164.1
Q ss_pred eeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHH
Q 018947 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 103 (348)
...+++++++|..+|+ .+|+|||+||++++...|.... ..+ ||+|+++|+||||.|..+. ...++++
T Consensus 64 ~~~~~~~~~~~~~~g~-~~~~vv~~hG~~~~~~~~~~~~-------~~l--g~~Vi~~D~~G~G~S~~~~---~~~~~~~ 130 (330)
T 3p2m_A 64 VERVQAGAISALRWGG-SAPRVIFLHGGGQNAHTWDTVI-------VGL--GEPALAVDLPGHGHSAWRE---DGNYSPQ 130 (330)
T ss_dssp EEEEEETTEEEEEESS-SCCSEEEECCTTCCGGGGHHHH-------HHS--CCCEEEECCTTSTTSCCCS---SCBCCHH
T ss_pred ceeecCceEEEEEeCC-CCCeEEEECCCCCccchHHHHH-------HHc--CCeEEEEcCCCCCCCCCCC---CCCCCHH
Confidence 4456788999999984 4788999999999987653222 333 9999999999999997442 2568999
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH--HHHHHHHhhccchhH
Q 018947 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK--VMSNLLYYYGMCGVV 181 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 181 (348)
++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++.............. ...............
T Consensus 131 ~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (330)
T 3p2m_A 131 LNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSF 210 (330)
T ss_dssp HHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCH
Confidence 999999999999999999999999999999999999999999999999854311100000000 000000000000000
Q ss_pred HHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCC---ccHHhhhccCCccEEEEecCCCCCC--
Q 018947 182 KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR---PDISEGLRKLQCRSLIFVGESSPFH-- 256 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvl~i~g~~D~~~-- 256 (348)
.............. ........+...........+......+... .+..+.+.++++|+|+|+|++|.++
T Consensus 211 -~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~ 285 (330)
T 3p2m_A 211 -QAMLDLTIAAAPHR----DVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTD 285 (330)
T ss_dssp -HHHHHHHHHHCTTS----CHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCH
T ss_pred -HHHHHHHHhcCCCC----CHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCH
Confidence 11111111000000 0011111111000000000000000000000 1123467889999999999999998
Q ss_pred chHHHHHHhhccCCcE-EEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 257 SEAVHMTSKIDRRYSA-LVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 257 ~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.....+.+.+++ .+ +++++++||+++.++|+++++.|.+||++
T Consensus 286 ~~~~~l~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 286 QDTAELHRRATH--FRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp HHHHHHHHHCSS--EEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCC--CeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 355678888887 88 99999999999999999999999999975
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-31 Score=235.34 Aligned_cols=271 Identities=12% Similarity=0.100 Sum_probs=167.9
Q ss_pred CceeEEEEccCC---CCCeEEEeCCCCCChhhhc-------cccccchhh---hhhccCCeEEEEeCCCCCCCCC-----
Q 018947 29 HGSLSVTIYGDQ---DKPALVTYPDLALNYMSCF-------QGLFFCPEA---CSLLLHNFCIYHINPPGHEFGA----- 90 (348)
Q Consensus 29 ~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~-------~~~~~~~~~---~~~~~~g~~vi~~D~~G~G~S~----- 90 (348)
+.+|+|..+|+. .+|+|||+||+++++.... ..-+|...+ ..+..+||+||++|+||||.|+
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g 105 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVI 105 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCC
T ss_pred eeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcc
Confidence 557899999853 3589999999999876510 000122222 3566789999999999997743
Q ss_pred --CCCC---CC-------CCCCCHHHHHHHHHHHHHHcCCCcee-EEEeChhHHHHHHHHHhCCCCcceEEE-ecCCCCC
Q 018947 91 --AAIS---DD-------EPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLIL-VSPLCKA 156 (348)
Q Consensus 91 --~~~~---~~-------~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl-~~~~~~~ 156 (348)
.+.. .. ...++++++++|+.+++++++.++++ |+||||||.+++.+|.++|++|+++|+ +++....
T Consensus 106 ~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 185 (377)
T 3i1i_A 106 TTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNP 185 (377)
T ss_dssp CCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBCC
T ss_pred cCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCcC
Confidence 1100 00 12579999999999999999999997 999999999999999999999999999 7665552
Q ss_pred CChHHHHHHHHHHHHHHh-h----------------------ccchhHHHHHHHhhhcccccCC----CCCCChHHHHHH
Q 018947 157 PSWTEWLYNKVMSNLLYY-Y----------------------GMCGVVKELLLKRYFSKEVRGN----AQVPESDIVQAC 209 (348)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 209 (348)
........ ......+.. . ..........+...+....... .......+...+
T Consensus 186 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (377)
T 3i1i_A 186 IITSVNVA-QNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEI 264 (377)
T ss_dssp HHHHHHTT-HHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHHHHH
T ss_pred CchhhHHH-HHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHHHHH
Confidence 22111100 000000000 0 0000000011111121111000 000011122222
Q ss_pred HHHHh----hhchhhHHHHHHHHcC------CccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhh----ccCCcEE
Q 018947 210 RRLLD----ERQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKI----DRRYSAL 273 (348)
Q Consensus 210 ~~~~~----~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~----~~~~~~~ 273 (348)
..... ......+......+.. ..+..+.+.++++|+|+|+|++|.++ ...+.+.+.+ ++ +++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~--~~~ 342 (377)
T 3i1i_A 265 NKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKY--AEV 342 (377)
T ss_dssp HHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCC--EEE
T ss_pred HHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCC--ceE
Confidence 11111 1122222222222211 13446778899999999999999988 4556788888 55 899
Q ss_pred EEecC-CCCCccccChhhhHHHHHHHHhhc
Q 018947 274 VEVQA-CGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 274 ~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+++++ +||++++|+|+++++.|.+||++.
T Consensus 343 ~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~ 372 (377)
T 3i1i_A 343 YEIESINGHMAGVFDIHLFEKKVYEFLNRK 372 (377)
T ss_dssp CCBCCTTGGGHHHHCGGGTHHHHHHHHHSC
T ss_pred EEcCCCCCCcchhcCHHHHHHHHHHHHHhh
Confidence 99998 999999999999999999999875
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-30 Score=229.52 Aligned_cols=270 Identities=13% Similarity=0.145 Sum_probs=173.8
Q ss_pred eecCCceeEEEEccCCC---CCeEEEeCCCCCChhh--------hccccccchhhh--hhc-cCCeEEEEeCCCC-CCCC
Q 018947 25 IKTSHGSLSVTIYGDQD---KPALVTYPDLALNYMS--------CFQGLFFCPEAC--SLL-LHNFCIYHINPPG-HEFG 89 (348)
Q Consensus 25 v~~~~~~l~~~~~g~~~---~p~vvllHG~~~~~~~--------~~~~~~~~~~~~--~~~-~~g~~vi~~D~~G-~G~S 89 (348)
+..++.+++|...|+++ +|+|||+||++++... |+..+ +. ..+ ++||+|+++|+|| +|.|
T Consensus 39 ~~~~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~~~g~~vi~~D~~G~~g~s 113 (377)
T 2b61_A 39 GKLSYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNF-----MGAGLALDTDRYFFISSNVLGGCKGT 113 (377)
T ss_dssp CEECSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGG-----EETTSSEETTTCEEEEECCTTCSSSS
T ss_pred ceecceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhc-----cCcccccccCCceEEEecCCCCCCCC
Confidence 34467789999999654 7899999999999876 12222 12 124 7899999999999 6887
Q ss_pred CCCCCCC----------CCCCCHHHHHHHHHHHHHHcCCCcee-EEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC
Q 018947 90 AAAISDD----------EPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS 158 (348)
Q Consensus 90 ~~~~~~~----------~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 158 (348)
..+.... ...++++++++|+.+++++++.++++ |+||||||.+++.+|.++|++|+++|++++......
T Consensus 114 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 193 (377)
T 2b61_A 114 TGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSA 193 (377)
T ss_dssp SCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCH
T ss_pred CCCcccCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccc
Confidence 6542100 01479999999999999999999998 999999999999999999999999999999876543
Q ss_pred hHHHHHHHHHHHHHHhhcc-----------c------hhH------HHHHHHhhhcccccCCCCC-CChHHHHHHHH---
Q 018947 159 WTEWLYNKVMSNLLYYYGM-----------C------GVV------KELLLKRYFSKEVRGNAQV-PESDIVQACRR--- 211 (348)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~-----------~------~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--- 211 (348)
............+.....+ . ... ....+...+.......... ......+.+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (377)
T 2b61_A 194 EAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQG 273 (377)
T ss_dssp HHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHH
T ss_pred cchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhh
Confidence 2211110000000000000 0 000 0011112222211110000 00112222221
Q ss_pred --HHhhhchhhHHHHHHHHcC------CccHHhhhccCCccEEEEecCCCCCCch------HHHHHHhhccCCcEEEEec
Q 018947 212 --LLDERQSSNVWHFLEAING------RPDISEGLRKLQCRSLIFVGESSPFHSE------AVHMTSKIDRRYSALVEVQ 277 (348)
Q Consensus 212 --~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvl~i~g~~D~~~~~------~~~~~~~~~~~~~~~~~~~ 277 (348)
.........+......+.. ..+....+.++++|+|+|+|++|.+++. .+.+.+.+++ +++++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~i~ 351 (377)
T 2b61_A 274 KKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVD--LHFYEFP 351 (377)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCE--EEEEEEC
T ss_pred hhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCC--ceEEEeC
Confidence 1112233333333333221 1234677889999999999999999843 3346677776 8999999
Q ss_pred -CCCCCccccChhhhHHHHHHHHhh
Q 018947 278 -ACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 278 -~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++||++++|+|+++++.|.+||++
T Consensus 352 ~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 352 SDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp CTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred CCCCchhhhcCHHHHHHHHHHHHhc
Confidence 999999999999999999999975
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-31 Score=220.04 Aligned_cols=234 Identities=13% Similarity=0.144 Sum_probs=165.8
Q ss_pred CceeEEEEccCC-CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018947 29 HGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 29 ~~~l~~~~~g~~-~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
+.+++|...|++ ++|+|||+||++++...|. .. ..+.+||+|+++|+||||.|..+ ..++++++++
T Consensus 2 g~~l~y~~~g~~~~~~~vv~~hG~~~~~~~~~-~~-------~~l~~g~~v~~~d~~g~g~s~~~-----~~~~~~~~~~ 68 (245)
T 3e0x_A 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNLKIFG-EL-------EKYLEDYNCILLDLKGHGESKGQ-----CPSTVYGYID 68 (245)
T ss_dssp CCCCCEEEEECTTCSCEEEEECCTTCCGGGGT-TG-------GGGCTTSEEEEECCTTSTTCCSC-----CCSSHHHHHH
T ss_pred CceeEEEecCCCCCCCEEEEEeCCcccHHHHH-HH-------HHHHhCCEEEEecCCCCCCCCCC-----CCcCHHHHHH
Confidence 668899998865 6899999999999987655 22 34458999999999999998632 4579999999
Q ss_pred HHHHHH------HHcCCCceeEEEeChhHHHHHHHHHh-CCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchh
Q 018947 108 QIAEVL------NHFGLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (348)
Q Consensus 108 dl~~~l------~~l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (348)
|+.+++ ++++ +++++|||+||.+++.+|.+ +|+ |+++|++++............... ........
T Consensus 69 ~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 140 (245)
T 3e0x_A 69 NVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKI-----YHNQLDNN 140 (245)
T ss_dssp HHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHH-----HTTCCCHH
T ss_pred HHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHH-----HHHHHHhh
Confidence 999999 8888 99999999999999999999 999 999999999877633222211111 00001100
Q ss_pred HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--ch
Q 018947 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 258 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~ 258 (348)
. .... .... .......+...+.. .+..+...+..... .+....+.++++|+++++|++|.++ ..
T Consensus 141 ~----~~~~-~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 206 (245)
T 3e0x_A 141 Y----LLEC-IGGI-------DNPLSEKYFETLEK-DPDIMINDLIACKL-IDLVDNLKNIDIPVKAIVAKDELLTLVEY 206 (245)
T ss_dssp H----HHHH-HTCS-------CSHHHHHHHTTSCS-SHHHHHHHHHHHHH-CBCGGGGGGCCSCEEEEEETTCSSSCHHH
T ss_pred c----Cccc-cccc-------chHHHHHHHHHHhc-CcHHHHHHHHHhcc-ccHHHHHHhCCCCEEEEEeCCCCCCCHHH
Confidence 0 0000 0000 12222222111111 22223333322222 3556678889999999999999998 34
Q ss_pred HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHH
Q 018947 259 AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 299 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 299 (348)
...+.+.+++ +++++++++||+++.++|+++++.|.+||
T Consensus 207 ~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 207 SEIIKKEVEN--SELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp HHHHHHHSSS--EEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred HHHHHHHcCC--ceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 5668888877 89999999999999999999999999885
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-31 Score=223.71 Aligned_cols=238 Identities=11% Similarity=0.068 Sum_probs=155.5
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-C
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~ 119 (348)
.+|+|||+||++++...|.. .+..+..+||+|+++|+||||.|..+. ...++++++++|+.+++++++. +
T Consensus 3 ~g~~vv~lHG~~~~~~~~~~------~~~~l~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~l~~~l~~l~~~~ 73 (258)
T 3dqz_A 3 RKHHFVLVHNAYHGAWIWYK------LKPLLESAGHRVTAVELAASGIDPRPI---QAVETVDEYSKPLIETLKSLPENE 73 (258)
T ss_dssp CCCEEEEECCTTCCGGGGTT------HHHHHHHTTCEEEEECCTTSTTCSSCG---GGCCSHHHHHHHHHHHHHTSCTTC
T ss_pred CCCcEEEECCCCCccccHHH------HHHHHHhCCCEEEEecCCCCcCCCCCC---CccccHHHhHHHHHHHHHHhcccC
Confidence 45899999999998876542 234555679999999999999997541 2358999999999999999998 8
Q ss_pred ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHH---Hhhccc-----------hhHHHHH
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL---YYYGMC-----------GVVKELL 185 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------~~~~~~~ 185 (348)
+++++||||||.+++.+|.++|++|+++|++++.................... ...... .......
T Consensus 74 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T 3dqz_A 74 EVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKF 153 (258)
T ss_dssp CEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred ceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHH
Confidence 99999999999999999999999999999999866543221110001100000 000000 0000111
Q ss_pred HHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHH
Q 018947 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMT 263 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~ 263 (348)
....+.... ................ .+...+.. .+........++|+++|+|++|.++ .....+.
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 220 (258)
T 3dqz_A 154 MKARLYQNC-------PIEDYELAKMLHRQGS--FFTEDLSK----KEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMI 220 (258)
T ss_dssp HHHHTSTTS-------CHHHHHHHHHHCCCEE--CCHHHHHT----SCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHH
T ss_pred HHHHhhccC-------CHHHHHHHHHhccCCc--hhhhhhhc----cccccccccccCCEEEEECCCCeeeCHHHHHHHH
Confidence 111111110 1222222211111111 11111110 0111112233799999999999998 3556688
Q ss_pred HhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 264 SKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 264 ~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+.+++ .++++++++||++++++|+++++.|.+|++++
T Consensus 221 ~~~~~--~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 221 DNFNV--SKVYEIDGGDHMVMLSKPQKLFDSLSAIATDY 257 (258)
T ss_dssp HHSCC--SCEEEETTCCSCHHHHSHHHHHHHHHHHHHHT
T ss_pred HhCCc--ccEEEcCCCCCchhhcChHHHHHHHHHHHHHh
Confidence 88887 89999999999999999999999999999874
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.7e-31 Score=221.68 Aligned_cols=241 Identities=7% Similarity=0.013 Sum_probs=155.4
Q ss_pred CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-
Q 018947 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG- 117 (348)
Q Consensus 39 ~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~- 117 (348)
+..+|+|||+||++++...|. ..+..+..+||+|+++|+||||.|..+. ...++++++++|+.+++++++
T Consensus 9 ~~~~~~vvllHG~~~~~~~~~------~~~~~l~~~g~~v~~~D~~G~G~S~~~~---~~~~~~~~~~~~~~~~l~~l~~ 79 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHGAWCWY------KIVALMRSSGHNVTALDLGASGINPKQA---LQIPNFSDYLSPLMEFMASLPA 79 (267)
T ss_dssp -CCCCEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEEECCTTSTTCSCCG---GGCCSHHHHHHHHHHHHHTSCT
T ss_pred CCCCCeEEEECCCCCCcchHH------HHHHHHHhcCCeEEEeccccCCCCCCcC---CccCCHHHHHHHHHHHHHhcCC
Confidence 357899999999999887654 2334555669999999999999997541 234899999999999999994
Q ss_pred CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhh---ccc-----------hhHHH
Q 018947 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY---GMC-----------GVVKE 183 (348)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------~~~~~ 183 (348)
.++++++||||||.+++.+|.++|++|+++|++++....................... ... .....
T Consensus 80 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (267)
T 3sty_A 80 NEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGP 159 (267)
T ss_dssp TSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCH
T ss_pred CCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhH
Confidence 8999999999999999999999999999999999877544322111111110000000 000 00000
Q ss_pred HHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHH
Q 018947 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 261 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~ 261 (348)
......+.... ......................+.. ... .......++|+++|+|++|.++ .....
T Consensus 160 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 227 (267)
T 3sty_A 160 KFLATNVYHLS-------PIEDLALATALVRPLYLYLAEDISK-EVV----LSSKRYGSVKRVFIVATENDALKKEFLKL 227 (267)
T ss_dssp HHHHHHTSTTS-------CHHHHHHHHHHCCCEECCCHHHHHH-HCC----CCTTTGGGSCEEEEECCCSCHHHHHHHHH
T ss_pred HHHHHhhcccC-------CHHHHHHHHHhhccchhHHHHHhhc-chh----cccccccCCCEEEEEeCCCCccCHHHHHH
Confidence 11111111100 1112221111111111101000111 000 0111123699999999999988 35556
Q ss_pred HHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 262 MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+.+.+++ +++++++++||++++|+|+++++.|.+|++++
T Consensus 228 ~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 228 MIEKNPP--DEVKEIEGSDHVTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHSCC--SEEEECTTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred HHHhCCC--ceEEEeCCCCccccccChHHHHHHHHHHHHhc
Confidence 8888887 89999999999999999999999999999875
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=235.89 Aligned_cols=259 Identities=11% Similarity=0.103 Sum_probs=177.7
Q ss_pred eeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHH
Q 018947 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 103 (348)
++..+|.+++|...| ++|+|||+||++++...|. ..+..+...||+|+++|+||||.|+.+ ...++++
T Consensus 8 ~~~~dG~~l~y~~~G--~gp~VV~lHG~~~~~~~~~------~l~~~La~~Gy~Vi~~D~rG~G~S~~~----~~~~s~~ 75 (456)
T 3vdx_A 8 QENSTSIDLYYEDHG--TGVPVVLIHGFPLSGHSWE------RQSAALLDAGYRVITYDRRGFGQSSQP----TTGYDYD 75 (456)
T ss_dssp EETTEEEEEEEEEES--SSEEEEEECCTTCCGGGGT------THHHHHHHHTEEEEEECCTTSTTSCCC----SSCCSHH
T ss_pred ccccCCeEEEEEEeC--CCCEEEEECCCCCcHHHHH------HHHHHHHHCCcEEEEECCCCCCCCCCC----CCCCCHH
Confidence 345577899999998 7799999999999887653 233455578999999999999999754 2468999
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCC--------Ch-HHHHHHHHHHHHHH
Q 018947 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAP--------SW-TEWLYNKVMSNLLY 173 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~--------~~-~~~~~~~~~~~~~~ 173 (348)
++++|+.++++.++.++++++||||||.+++.+|+++ |++|+++|++++..... .. ..... ..+.....
T Consensus 76 ~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 154 (456)
T 3vdx_A 76 TFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFF-DGIVAAVK 154 (456)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHH-HHHHHhhh
Confidence 9999999999999999999999999999999999987 99999999999876421 00 11111 11111110
Q ss_pred hhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCC
Q 018947 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (348)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 253 (348)
. ...... ......++........ ............................+ ..+....+.++++|+|+|+|++|
T Consensus 155 ~-~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~PvLiI~G~~D 229 (456)
T 3vdx_A 155 A-DRYAFY-TGFFNDFYNLDENLGT-RISEEAVRNSWNTAASGGFFAAAAAPTTW--YTDFRADIPRIDVPALILHGTGD 229 (456)
T ss_dssp H-CHHHHH-HHHHHHHTTTTTSBTT-TBCHHHHHHHHHHHHTSCTTHHHHGGGGT--TCCCTTTSTTCCSCCEEEEETTC
T ss_pred c-cchHHH-HHHHHHHhcccccccc-cccHHHHHHHhhhccccchhhhhhhhhhh--hhhHHHHhhhCCCCEEEEEeCCC
Confidence 0 111111 2223333332211110 11333333333332222222222222221 24556678899999999999999
Q ss_pred CCCc---hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 254 PFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 254 ~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+++ ....+.+.+++ +++++++++||+++.++|+++++.|.+||++.
T Consensus 230 ~~vp~~~~~~~l~~~~~~--~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~ 279 (456)
T 3vdx_A 230 RTLPIENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLAKA 279 (456)
T ss_dssp SSSCGGGTHHHHHHHCTT--SEEEEETTCCSCTTTTTHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHCCC--ceEEEeCCCCCcchhhCHHHHHHHHHHHHHHh
Confidence 9983 34557777776 99999999999999999999999999999875
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=225.87 Aligned_cols=261 Identities=13% Similarity=0.112 Sum_probs=168.7
Q ss_pred ceeecCCceeEEEEccCC--CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~--~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
.++..+|.+++|..+++. .+|+|||+||++++...|. ..+..+..+||+|+++|+||||.|..+ ....+
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~---~~~~~ 91 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGRYE------ELARMLMGLDLLVFAHDHVGHGQSEGE---RMVVS 91 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGH------HHHHHHHHTTEEEEEECCTTSTTSCSS---TTCCS
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhhHHH------HHHHHHHhCCCcEEEeCCCCCCCCCCC---CCCCC
Confidence 455668889999988753 3578999999998876543 233556667999999999999999744 23457
Q ss_pred CHHHHHHHHHHHHHHcCC----CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhc
Q 018947 101 SVDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (348)
+++++++|+.++++.+.. ++++++|||+||.+++.+|.++|++|+++|++++.......................
T Consensus 92 ~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~- 170 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNSV- 170 (303)
T ss_dssp STHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHHh-
Confidence 888999999998877643 489999999999999999999999999999999987654332222111111111000
Q ss_pred cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
... ....................+....... ................+....+.++++|+++++|++|.+
T Consensus 171 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 241 (303)
T 3pe6_A 171 LPN---------LSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRL 241 (303)
T ss_dssp CCS---------CCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSS
T ss_pred ccc---------ccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCC
Confidence 000 0000000000000222222221111100 000111111111111344566788999999999999999
Q ss_pred C--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHH---HHHHHhhc
Q 018947 256 H--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIP---MEYFLMGY 302 (348)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~---i~~fl~~~ 302 (348)
+ .....+.+.++..+.++++++++||+++.++|+++.+. +.+||++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~ 293 (303)
T 3pe6_A 242 CDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 293 (303)
T ss_dssp BCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhcc
Confidence 8 35566888888545899999999999999999866665 56666665
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=234.19 Aligned_cols=270 Identities=14% Similarity=0.129 Sum_probs=171.4
Q ss_pred CCceeEEEEccCC---CCCeEEEeCCCCCChhhhccccccchhhh---hhccCCeEEEEeCCCC--CCCCCCCC--CC-C
Q 018947 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEAC---SLLLHNFCIYHINPPG--HEFGAAAI--SD-D 96 (348)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~~~~~~~~~---~~~~~g~~vi~~D~~G--~G~S~~~~--~~-~ 96 (348)
++.+++|..+|+. ++|+|||+||++++...+. +|...+. .+..+||+|+++|+|| ||.|.... +. .
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~---~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~ 168 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTS---WWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAE 168 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGG---TCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCCcccchhh---HHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccc
Confidence 4457899999863 3689999999999987610 0111112 2447899999999999 68875321 11 0
Q ss_pred --------CCCCCHHHHHHHHHHHHHHcCCCc-eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH
Q 018947 97 --------EPVLSVDDLADQIAEVLNHFGLGA-VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (348)
Q Consensus 97 --------~~~~~~~~~~~dl~~~l~~l~~~~-v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (348)
...++++++++|+.+++++++.++ ++++||||||++++.+|.++|++|+++|++++......+........
T Consensus 169 ~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~ 248 (444)
T 2vat_A 169 GQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQ 248 (444)
T ss_dssp --CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHH
Confidence 114799999999999999999999 99999999999999999999999999999999876543221110000
Q ss_pred HHHHHHhhccc---------hh---H-----------HHHHHHhhhcccccC-C-CC-------------------C--C
Q 018947 168 MSNLLYYYGMC---------GV---V-----------KELLLKRYFSKEVRG-N-AQ-------------------V--P 201 (348)
Q Consensus 168 ~~~~~~~~~~~---------~~---~-----------~~~~~~~~~~~~~~~-~-~~-------------------~--~ 201 (348)
.........+. .. . ....+...+...... . .. . .
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (444)
T 2vat_A 249 RQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQ 328 (444)
T ss_dssp HHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------
T ss_pred HHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccC
Confidence 00000000000 00 0 000111112211110 0 00 0 0
Q ss_pred ChHHHHHHHH-----HHhhhchhhHHHHHHHHcCC-------ccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhc
Q 018947 202 ESDIVQACRR-----LLDERQSSNVWHFLEAINGR-------PDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKID 267 (348)
Q Consensus 202 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~ 267 (348)
.....+.+.+ .........+......+... .+..+.+.++++|+|+|+|++|.++ ...+.+++.++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p 408 (444)
T 2vat_A 329 PIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIP 408 (444)
T ss_dssp CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHST
T ss_pred chhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCC
Confidence 0001111111 11112233333333333221 1266778899999999999999998 35566888888
Q ss_pred cCCcEEEEec-CCCCCccccChhhhHHHHHHHHhhc
Q 018947 268 RRYSALVEVQ-ACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 268 ~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+ +++++++ ++||++++|+|+++++.|.+||++.
T Consensus 409 ~--~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 409 N--SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp T--EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred C--cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 7 9999999 8999999999999999999999764
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=219.95 Aligned_cols=254 Identities=13% Similarity=0.167 Sum_probs=154.6
Q ss_pred ceeecCC----ceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccC--CeEEEEeCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSH----GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 23 ~~v~~~~----~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~--g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
..+.+++ ++++|+..| +++|+|||+||++++...|... ...+.+ +|+||++|+||||.|+.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~g-~~~p~lvllHG~~~~~~~w~~~-------~~~L~~~~~~~via~Dl~GhG~S~~~~--- 84 (316)
T 3c5v_A 16 EDVEVENETGKDTFRVYKSG-SEGPVLLLLHGGGHSALSWAVF-------TAAIISRVQCRIVALDLRSHGETKVKN--- 84 (316)
T ss_dssp EEEEEEETTEEEEEEEEEEC-SSSCEEEEECCTTCCGGGGHHH-------HHHHHTTBCCEEEEECCTTSTTCBCSC---
T ss_pred ceEEecCCcceEEEEEEecC-CCCcEEEEECCCCcccccHHHH-------HHHHhhcCCeEEEEecCCCCCCCCCCC---
Confidence 3455544 478888887 4678999999999887665422 345556 8999999999999997531
Q ss_pred CCCCCHHHHHHHHHHHHHHc--CC-CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHF--GL-GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l--~~-~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
...++++++++|+.++++++ +. ++++|+||||||.+|+.+|.+ +|+ |+++|++++..... .... ......
T Consensus 85 ~~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~--~~~~--~~~~~~ 159 (316)
T 3c5v_A 85 PEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTA--MDAL--NSMQNF 159 (316)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHH--HHHH--HHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccch--hhhH--HHHHHH
Confidence 23589999999999999999 66 789999999999999999996 576 99999998742110 0000 000000
Q ss_pred HHhh-ccchhHHHHHHHhhhcccccCCCCCCChHHHH-HHHHHHh-------------------hhchhhHHHHHHHHcC
Q 018947 172 LYYY-GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQ-ACRRLLD-------------------ERQSSNVWHFLEAING 230 (348)
Q Consensus 172 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------------~~~~~~~~~~~~~~~~ 230 (348)
.... ...... .......+...... ...... .....+. .........++....
T Consensus 160 ~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (316)
T 3c5v_A 160 LRGRPKTFKSL-ENAIEWSVKSGQIR-----NLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWF- 232 (316)
T ss_dssp HHHSCSCBSSH-HHHHHHHHHTTSCC-----CHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHH-
T ss_pred HhhCccccccH-HHHHHHhhhccccc-----chhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhh-
Confidence 0000 000000 00001000000000 000000 0000000 000000001111110
Q ss_pred CccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 231 RPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 231 ~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
.+....+.++++|+|+|+|++|.+.+. .......++ .++++++++||++++|+|+++++.|.+||++..
T Consensus 233 -~~~~~~~~~i~~P~Lli~g~~D~~~~~-~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 301 (316)
T 3c5v_A 233 -RGLSNLFLSCPIPKLLLLAGVDRLDKD-LTIGQMQGK--FQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHR 301 (316)
T ss_dssp -TTHHHHHHHSSSCEEEEESSCCCCCHH-HHHHHHTTC--SEEEECCCCSSCHHHHSHHHHHHHHHHHHHHTT
T ss_pred -hhhHHHhhcCCCCEEEEEecccccccH-HHHHhhCCc--eeEEEcCCCCCcccccCHHHHHHHHHHHHHhcc
Confidence 122334567999999999999987521 222233333 899999999999999999999999999998764
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-32 Score=230.09 Aligned_cols=255 Identities=14% Similarity=0.149 Sum_probs=163.0
Q ss_pred CCCccceeecCCceeEEEEccCCCCCeEEEeCCCCC--ChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLAL--NYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~--~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
...++.++.++++.++|...+ ++|+|||+||+|. +...|. . +...+.++|+|+++|+||||.|+.+
T Consensus 19 ~~~~~~~v~~~~~~~~~~~~~--~~p~vv~lHG~G~~~~~~~~~------~-~~~~L~~~~~vi~~D~~G~G~S~~~--- 86 (292)
T 3l80_A 19 AALNKEMVNTLLGPIYTCHRE--GNPCFVFLSGAGFFSTADNFA------N-IIDKLPDSIGILTIDAPNSGYSPVS--- 86 (292)
T ss_dssp -CCEEEEECCTTSCEEEEEEC--CSSEEEEECCSSSCCHHHHTH------H-HHTTSCTTSEEEEECCTTSTTSCCC---
T ss_pred hccCcceEEecCceEEEecCC--CCCEEEEEcCCCCCcHHHHHH------H-HHHHHhhcCeEEEEcCCCCCCCCCC---
Confidence 345677888999999887433 6799999996544 343332 1 2355668999999999999999732
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC---------CChHHHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA---------PSWTEWLYNK 166 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~---------~~~~~~~~~~ 166 (348)
....++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++.... .... .
T Consensus 87 ~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~---- 161 (292)
T 3l80_A 87 NQANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQ-L---- 161 (292)
T ss_dssp CCTTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHH-H----
T ss_pred CcccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchh-H----
Confidence 1346899999999999999999999999999999999999999999999999999964421 1111 0
Q ss_pred HHHHHHHhhcc---ch-hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhch-hhHHHHHHHHcCCccHHhhhccC
Q 018947 167 VMSNLLYYYGM---CG-VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS-SNVWHFLEAINGRPDISEGLRKL 241 (348)
Q Consensus 167 ~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i 241 (348)
......... .. .. ......++....... ...........+..... .. ...+.. ....+..+.+..
T Consensus 162 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~-~~~~~~-~~~~~~~~~l~~- 231 (292)
T 3l80_A 162 --ALRRQKLKTAADRLNYL-KDLSRSHFSSQQFKQ----LWRGYDYCQRQLNDVQSLPD-FKIRLA-LGEEDFKTGISE- 231 (292)
T ss_dssp --HHHHHTCCSHHHHHHHH-HHHHHHHSCHHHHHH----HHHHHHHHHHHHHTTTTSTT-CCSSCC-CCGGGGCCCCCT-
T ss_pred --HHHHHHHhccCchhhhH-hhccccccCHHHHHH----hHHHHHHHHHHHHhhhhccc-cchhhh-hcchhhhhccCC-
Confidence 000000000 00 11 122233333221100 00111111111111110 00 000000 000112234556
Q ss_pred CccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 242 QCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 242 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++|+++|+|++|..++....+.+.+++ .+ ++++++||+++.|+|+++++.|.+||++.
T Consensus 232 ~~P~lii~g~~D~~~~~~~~~~~~~~~--~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 232 KIPSIVFSESFREKEYLESEYLNKHTQ--TK-LILCGQHHYLHWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp TSCEEEEECGGGHHHHHTSTTCCCCTT--CE-EEECCSSSCHHHHCHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEccCccccchHHHHhccCCC--ce-eeeCCCCCcchhhCHHHHHHHHHHHHHhc
Confidence 899999999999887222255555665 77 99999999999999999999999999875
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=224.69 Aligned_cols=261 Identities=13% Similarity=0.117 Sum_probs=167.8
Q ss_pred ceeecCCceeEEEEccCC--CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~--~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
.++..+|.+++|..+++. .+|+|||+||++++...|. ..+..+...||+|+++|+||||.|..+ ....+
T Consensus 39 ~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~~ 109 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGRYE------ELARMLMGLDLLVFAHDHVGHGQSEGE---RMVVS 109 (342)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGH------HHHHHHHTTTEEEEEECCTTSTTSCSS---TTCCS
T ss_pred eEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccchHH------HHHHHHHhCCCeEEEEcCCCCcCCCCc---CCCcC
Confidence 445557789999988643 4568999999999876543 233556666999999999999999754 23457
Q ss_pred CHHHHHHHHHHHHHHcCC----CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhc
Q 018947 101 SVDDLADQIAEVLNHFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYG 176 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (348)
+++++++|+.++++.+.. .+++++|||+||.+++.+|.++|++|+++|++++......................
T Consensus 110 ~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-- 187 (342)
T 3hju_A 110 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNL-- 187 (342)
T ss_dssp CTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHHHH--
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHHHH--
Confidence 889999999988877654 48999999999999999999999999999999988765432211111111111000
Q ss_pred cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
....+...................+........ ..........+....+..+.+.++++|+|+|+|++|.+
T Consensus 188 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~ 259 (342)
T 3hju_A 188 --------VLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRL 259 (342)
T ss_dssp --------HCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSS
T ss_pred --------hccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcc
Confidence 000000000000000002222222211111000 00111111111111344566888999999999999999
Q ss_pred C--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHH---HHHHHhhc
Q 018947 256 H--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIP---MEYFLMGY 302 (348)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~---i~~fl~~~ 302 (348)
+ .....+.+.+++.+.++++++++||+.+.++|+++.+. +.+||++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~ 311 (342)
T 3hju_A 260 CDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 311 (342)
T ss_dssp SCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcc
Confidence 8 35567888888545899999999999999999866655 66777665
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=242.32 Aligned_cols=271 Identities=13% Similarity=0.134 Sum_probs=179.2
Q ss_pred Cccceeec-CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 20 GKDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 20 ~~~~~v~~-~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
.+..++.+ +|.+++|...| ++|+|||+||++++...|. ..+..+..+||+|+++|+||||.|..+ ....
T Consensus 237 ~~~~~~~~~dg~~l~~~~~g--~~p~vv~~HG~~~~~~~~~------~~~~~l~~~G~~v~~~D~~G~G~S~~~--~~~~ 306 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYSWR------YQIPALAQAGYRVLAMDMKGYGESSAP--PEIE 306 (555)
T ss_dssp SEEEEEEEETTEEEEEEEEC--SSSEEEEECCTTCCGGGGT------THHHHHHHTTCEEEEECCTTSTTSCCC--SCGG
T ss_pred cceeEEEeCCCcEEEEEEcC--CCCEEEEEeCCCCchhHHH------HHHHHHHhCCCEEEEecCCCCCCCCCC--CCcc
Confidence 35567777 67799999999 6799999999999886653 233566677999999999999999755 2234
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH--HHHHHHH--H---HHH
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT--EWLYNKV--M---SNL 171 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~--~---~~~ 171 (348)
.++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++........ ....... . ...
T Consensus 307 ~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (555)
T 3i28_A 307 EYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLY 386 (555)
T ss_dssp GGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHH
T ss_pred cccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHH
Confidence 68899999999999999999999999999999999999999999999999999876543211 0000000 0 000
Q ss_pred HHhhc-----cchhHHHHHHHhhhccccc----------------------CCCCCCChHHHHHHHHHHhhhchhhHHHH
Q 018947 172 LYYYG-----MCGVVKELLLKRYFSKEVR----------------------GNAQVPESDIVQACRRLLDERQSSNVWHF 224 (348)
Q Consensus 172 ~~~~~-----~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (348)
+.... ..... ...+..++..... .............+...+..........+
T Consensus 387 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (555)
T 3i28_A 387 FQEPGVAEAELEQNL-SRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNW 465 (555)
T ss_dssp HHSTTHHHHHHHHCH-HHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHT
T ss_pred hhCCCchHHHHhhhH-HHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHH
Confidence 00000 00000 1111112111100 00001122333333333332221111111
Q ss_pred HHHHcC--CccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 225 LEAING--RPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 225 ~~~~~~--~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+..+.. ..+....+.++++|+|+|+|++|.++ .....+.+.+++ +++++++++||+++.++|+++++.|.+||+
T Consensus 466 ~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 543 (555)
T 3i28_A 466 YRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH--LKRGHIEDCGHWTQMDKPTEVNQILIKWLD 543 (555)
T ss_dssp TSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCC--ceEEEeCCCCCCcchhCHHHHHHHHHHHHH
Confidence 100000 01233456789999999999999988 344567777776 899999999999999999999999999999
Q ss_pred hcc
Q 018947 301 GYG 303 (348)
Q Consensus 301 ~~~ 303 (348)
+..
T Consensus 544 ~~~ 546 (555)
T 3i28_A 544 SDA 546 (555)
T ss_dssp HHT
T ss_pred hcc
Confidence 874
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=231.75 Aligned_cols=270 Identities=14% Similarity=0.120 Sum_probs=172.7
Q ss_pred CCCccceeecCCceeEEEEccCCC-------C--CeEEEeCCCCCChhhhccccccchhhhhhc----cCCe---EEEEe
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGDQD-------K--PALVTYPDLALNYMSCFQGLFFCPEACSLL----LHNF---CIYHI 81 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~~~-------~--p~vvllHG~~~~~~~~~~~~~~~~~~~~~~----~~g~---~vi~~ 81 (348)
...+..++..+|.+++|..+|+.+ + |+|||+||++++...|.... ..+. ..|| +|+++
T Consensus 19 ~~~~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~------~~L~~~~~~~G~~~~~vi~~ 92 (398)
T 2y6u_A 19 RAPQSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYL------PRLVAADAEGNYAIDKVLLI 92 (398)
T ss_dssp CSTTSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGG------GGSCCCBTTTTEEEEEEEEE
T ss_pred CCCCccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHH------HHHHHhhhhcCcceeEEEEE
Confidence 333444556688899999988543 3 68999999999987654222 3444 2389 99999
Q ss_pred CCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHcC----CCc--eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCC
Q 018947 82 NPPGHEFGAAAISD-DEPVLSVDDLADQIAEVLNHFG----LGA--VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (348)
Q Consensus 82 D~~G~G~S~~~~~~-~~~~~~~~~~~~dl~~~l~~l~----~~~--v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (348)
|+||||.|+.+... ....++++++++|+.++++.+. ..+ ++++||||||.+++.+|.++|++|+++|++++..
T Consensus 93 D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 172 (398)
T 2y6u_A 93 DQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVV 172 (398)
T ss_dssp CCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCC
T ss_pred cCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccc
Confidence 99999998754211 1246899999999999998744 444 9999999999999999999999999999999877
Q ss_pred CCCC---------------hHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcc-cccCCCCCCChHHHHHHHHHHhhhc-
Q 018947 155 KAPS---------------WTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK-EVRGNAQVPESDIVQACRRLLDERQ- 217 (348)
Q Consensus 155 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 217 (348)
.... ...... . ... ...............++.. .... ...+...+.+........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 244 (398)
T 2y6u_A 173 ITRKAIGAGRPGLPPDSPQIPENLY-N---SLR-LKTCDHFANESEYVKYMRNGSFFT---NAHSQILQNIIDFERTKAS 244 (398)
T ss_dssp SCCCCCSCCCTTCCTTCCCCCHHHH-H---HHH-HTCCCEESSHHHHHHHHHHTSTTT---TSCHHHHHHHHHHHEEC--
T ss_pred ccccccccccccccccccccchhhH-H---Hhh-hhccccCCCHHHHHHHhhcCcccc---cCCHHHHHHHHHhcCcccc
Confidence 6411 000110 0 000 0000000000001111110 0000 003344443332211000
Q ss_pred -----h------hhHHHHHHHHc----CCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCC
Q 018947 218 -----S------SNVWHFLEAIN----GRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACG 280 (348)
Q Consensus 218 -----~------~~~~~~~~~~~----~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~g 280 (348)
. ......+..+. ...+....+..+++|+|+|+|++|.+++ ....+.+.+++ +++++++++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~--~~~~~~~~~g 322 (398)
T 2y6u_A 245 GDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQN--YHLDVIPGGS 322 (398)
T ss_dssp ------CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSS--EEEEEETTCC
T ss_pred ccccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCC--ceEEEeCCCC
Confidence 0 00000111110 1123345678899999999999999983 55568888886 8999999999
Q ss_pred CCccccChhhhHHHHHHHHhhcc
Q 018947 281 SMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 281 H~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
|+++.++|+++++.|.+||++..
T Consensus 323 H~~~~e~p~~~~~~i~~fl~~~~ 345 (398)
T 2y6u_A 323 HLVNVEAPDLVIERINHHIHEFV 345 (398)
T ss_dssp TTHHHHSHHHHHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998864
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=215.72 Aligned_cols=233 Identities=13% Similarity=0.099 Sum_probs=160.8
Q ss_pred ceeecCCceeEEEEccCC----CCCeEEEeCCCCCC--hhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYGDQ----DKPALVTYPDLALN--YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~----~~p~vvllHG~~~~--~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
..+..+|.++++..+++. .+|+|||+||++++ ...|. ..+..+...||+|+++|+||||.|...
T Consensus 4 ~~~~~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~~---- 73 (251)
T 2wtm_A 4 MYIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIV------AVQETLNEIGVATLRADMYGHGKSDGK---- 73 (251)
T ss_dssp EEEEETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHHHH------HHHHHHHHTTCEEEEECCTTSTTSSSC----
T ss_pred eEEecCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccccHH------HHHHHHHHCCCEEEEecCCCCCCCCCc----
Confidence 345668889988877643 45789999999988 44332 233455567999999999999998743
Q ss_pred CCCCCHHHHHHHHHHHHHHcC----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHFG----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (348)
...++++++++|+.++++.+. .++++++||||||.+++.+|.++|++|+++|+++|..... ... .
T Consensus 74 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~---~~~-----~--- 142 (251)
T 2wtm_A 74 FEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIP---EIA-----R--- 142 (251)
T ss_dssp GGGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHH---HHH-----H---
T ss_pred cccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhH---HHH-----h---
Confidence 235789999999999998874 4689999999999999999999999999999998764311 000 0
Q ss_pred HhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCC
Q 018947 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (348)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~ 252 (348)
.. .... ..+..... ...... + ....... .+..... ..+..+.+.++++|+|+|+|++
T Consensus 143 ~~-~~~~--------~~~~~~~~------~~~~~~-~---~~~~~~~---~~~~~~~-~~~~~~~~~~i~~P~lii~G~~ 199 (251)
T 2wtm_A 143 TG-ELLG--------LKFDPENI------PDELDA-W---DGRKLKG---NYVRVAQ-TIRVEDFVDKYTKPVLIVHGDQ 199 (251)
T ss_dssp HT-EETT--------EECBTTBC------CSEEEE-T---TTEEEET---HHHHHHT-TCCHHHHHHHCCSCEEEEEETT
T ss_pred hh-hhcc--------ccCCchhc------chHHhh-h---hccccch---HHHHHHH-ccCHHHHHHhcCCCEEEEEeCC
Confidence 00 0000 00000000 000000 0 0000000 1111111 2355566788999999999999
Q ss_pred CCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 253 SPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 253 D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|.+++ ..+.+.+.+++ +++++++++||++ .++|+++++.|.+||++.
T Consensus 200 D~~v~~~~~~~~~~~~~~--~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 248 (251)
T 2wtm_A 200 DEAVPYEASVAFSKQYKN--CKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQ 248 (251)
T ss_dssp CSSSCHHHHHHHHHHSSS--EEEEEETTCCTTC-TTTHHHHHHHHHHHHHHH
T ss_pred CCCcChHHHHHHHHhCCC--cEEEEECCCCccc-chhHHHHHHHHHHHHHHh
Confidence 99983 45567788876 9999999999999 999999999999999764
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-33 Score=240.95 Aligned_cols=265 Identities=14% Similarity=0.151 Sum_probs=169.1
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC-CCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DEPV 99 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~ 99 (348)
+..++.++|.+++|...| ++|+|||+||++++...|... ...+.+||+|+++|+||||.|..+... ....
T Consensus 6 ~~~~~~~~g~~~~~~~~g--~~p~vv~lHG~~~~~~~~~~~-------~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~ 76 (304)
T 3b12_A 6 ERRLVDVGDVTINCVVGG--SGPALLLLHGFPQNLHMWARV-------APLLANEYTVVCADLRGYGGSSKPVGAPDHAN 76 (304)
Confidence 456777889999999988 678999999999887665322 244458999999999999999754210 0346
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH------------
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV------------ 167 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------------ 167 (348)
++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++...............
T Consensus 77 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
T 3b12_A 77 YSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQP 156 (304)
Confidence 89999999999999999999999999999999999999999999999999998765432211100000
Q ss_pred --HHHHHHhhccchhHHHH-HHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHHcC---CccHHhhhcc
Q 018947 168 --MSNLLYYYGMCGVVKEL-LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAING---RPDISEGLRK 240 (348)
Q Consensus 168 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~ 240 (348)
....+......... .. ++..++..... ...+..+.+........ .......+..... ..+....+.+
T Consensus 157 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (304)
T 3b12_A 157 APYPEKVIGADPDTFY-EGCLFGWGATGADG-----FDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQ 230 (304)
Confidence 00000000000000 00 11111110000 01112222221111100 0111111111111 0111122678
Q ss_pred CCccEEEEecCCCCCC---chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 241 LQCRSLIFVGESSPFH---SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 241 i~~Pvl~i~g~~D~~~---~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
+++|+|+|+|++|..+ .....+.+..++ .+++++ ++||++++++|+++++.|.+||++..
T Consensus 231 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (304)
T 3b12_A 231 VQCPALVFSGSAGLMHSLFEMQVVWAPRLAN--MRFASL-PGGHFFVDRFPDDTARILREFLSDAR 293 (304)
Confidence 9999999999999654 234445666665 788888 99999999999999999999998873
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-29 Score=222.03 Aligned_cols=269 Identities=10% Similarity=0.038 Sum_probs=164.8
Q ss_pred ceeecCCceeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccC----------CeEEEEeCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH----------NFCIYHINPPGHEFGA 90 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~----------g~~vi~~D~~G~G~S~ 90 (348)
..+.++|.+++|...++ +++++|||+||++++...|.... ..+.+ +|+|+++|+||||.|+
T Consensus 71 ~~~~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~-------~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~ 143 (388)
T 4i19_A 71 FTTEIDGATIHFLHVRSPEPDATPMVITHGWPGTPVEFLDII-------GPLTDPRAHGGDPADAFHLVIPSLPGFGLSG 143 (388)
T ss_dssp EEEEETTEEEEEEEECCSSTTCEEEEEECCTTCCGGGGHHHH-------HHHHCGGGGTSCGGGCEEEEEECCTTSGGGC
T ss_pred EEEEECCeEEEEEEccCCCCCCCeEEEECCCCCCHHHHHHHH-------HHHhCcccccCCCCCCeEEEEEcCCCCCCCC
Confidence 45577899999987643 46789999999999987764322 34444 9999999999999998
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC---------hHH
Q 018947 91 AAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS---------WTE 161 (348)
Q Consensus 91 ~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---------~~~ 161 (348)
.+.. ..++++++++++.+++++++.++++++||||||.+++.+|.++|++|++++++++...... ...
T Consensus 144 ~~~~---~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~l~~~~ 220 (388)
T 4i19_A 144 PLKS---AGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTNLSGEPGELETLSDAD 220 (388)
T ss_dssp CCSS---CCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCCBCCCGGGGGGCCHHH
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCCCCCcccccccCCHHH
Confidence 6522 3579999999999999999999999999999999999999999999999999997654321 001
Q ss_pred HHHHHHHHHHHHh-------hccchh------------HHHHHHHhhhcccccC---CCCCCChHHHHHHHHHHhhhchh
Q 018947 162 WLYNKVMSNLLYY-------YGMCGV------------VKELLLKRYFSKEVRG---NAQVPESDIVQACRRLLDERQSS 219 (348)
Q Consensus 162 ~~~~~~~~~~~~~-------~~~~~~------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 219 (348)
............. ...... ....+..++....... ......+++.....-.+......
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~~~d~ll~~~~~y~~t~~~~ 300 (388)
T 4i19_A 221 KARLAVSERFLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAVDRDLMLTHISLFWFTATGG 300 (388)
T ss_dssp HHHHHTHHHHHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTSCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCCCHHHHHHHHHHHHhcCCch
Confidence 1000000000000 000000 0001111111000000 00000122222221111111111
Q ss_pred hHHHHHHHHc--CCc-cHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHH
Q 018947 220 NVWHFLEAIN--GRP-DISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPME 296 (348)
Q Consensus 220 ~~~~~~~~~~--~~~-~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 296 (348)
.....+.... ... .....+..+++|+++++|.+|..... ..+.+....+..++.+++++||++++|+|+.+++.|.
T Consensus 301 ~s~~~y~e~~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~p-~~~~~~~~~~~~~~~~~~~gGHf~~~E~Pe~~~~~l~ 379 (388)
T 4i19_A 301 SAAQAHYELKPFLPITSLIGRSPTLDVPMGVAVYPGALFQPV-RSLAERDFKQIVHWAELDRGGHFSAMEEPDLFVDDLR 379 (388)
T ss_dssp HHHHHHHHTGGGCTTTCCBCCCCCBCSCEEEEECTBCSSCCC-HHHHHHHBTTEEEEEECSSCBSSHHHHCHHHHHHHHH
T ss_pred hHHHHHHHhhcccccccccccCCCCCCCEEEEeCCccccccc-HHHHHHhCCCeEEEEECCCCcCccchhcHHHHHHHHH
Confidence 1111111111 100 01124567899999999999965522 2333333212267888999999999999999999999
Q ss_pred HHHhhc
Q 018947 297 YFLMGY 302 (348)
Q Consensus 297 ~fl~~~ 302 (348)
+|++++
T Consensus 380 ~fl~~~ 385 (388)
T 4i19_A 380 TFNRTL 385 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-29 Score=218.82 Aligned_cols=280 Identities=12% Similarity=0.072 Sum_probs=167.6
Q ss_pred CCCCCccceeec-CCceeEEEEc--cC------CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC
Q 018947 16 PPPSGKDNLIKT-SHGSLSVTIY--GD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH 86 (348)
Q Consensus 16 ~~~~~~~~~v~~-~~~~l~~~~~--g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 86 (348)
..+..+...+.+ +|..++|..+ +. ..+|+|||+||++++...|.........+..+..+||+|+++|+|||
T Consensus 23 ~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 23 WGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp TTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred cCCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 345556666776 4557787766 22 26789999999999987765333111122255567999999999999
Q ss_pred CCCCCCC-----CCCCCCCCHHHHHH-HHHHHH----HHcCCCceeEEEeChhHHHHHHHHHhCCC---CcceEEEecCC
Q 018947 87 EFGAAAI-----SDDEPVLSVDDLAD-QIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPL 153 (348)
Q Consensus 87 G~S~~~~-----~~~~~~~~~~~~~~-dl~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 153 (348)
|.|.... ......++++++++ |+.+++ ++++.++++++||||||.+++.+|.++|+ +|+++|++++.
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~ 182 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPV 182 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCC
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCc
Confidence 9997531 11111579999998 887765 45788999999999999999999999998 89999999987
Q ss_pred CCCCChHHHH--HHHHH-HHHHHhhcc----c-hhH-----------------HHHHHHhhhcccccCCCCCCChHHHHH
Q 018947 154 CKAPSWTEWL--YNKVM-SNLLYYYGM----C-GVV-----------------KELLLKRYFSKEVRGNAQVPESDIVQA 208 (348)
Q Consensus 154 ~~~~~~~~~~--~~~~~-~~~~~~~~~----~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (348)
.......... ..... .......+. . ... .......+.+...... .......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 258 (377)
T 1k8q_A 183 ATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNL----NMSRLDV 258 (377)
T ss_dssp SCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGS----CGGGHHH
T ss_pred hhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccC----CHHHHHH
Confidence 6543211000 00000 000000000 0 000 0000000111000000 1111111
Q ss_pred HHHHHhhh-chhhHHHHHHH--------------------HcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHh
Q 018947 209 CRRLLDER-QSSNVWHFLEA--------------------INGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSK 265 (348)
Q Consensus 209 ~~~~~~~~-~~~~~~~~~~~--------------------~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~ 265 (348)
+....... .......+... +.........+.++++|+|+|+|++|.+++ ....+.+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 338 (377)
T 1k8q_A 259 YLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSK 338 (377)
T ss_dssp HHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTT
T ss_pred HhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHh
Confidence 11100000 00001111110 000001122378899999999999999983 55678888
Q ss_pred hccCCcE-EEEecCCCCCccc---cChhhhHHHHHHHHhh
Q 018947 266 IDRRYSA-LVEVQACGSMVTE---EQPHAMLIPMEYFLMG 301 (348)
Q Consensus 266 ~~~~~~~-~~~~~~~gH~~~~---e~p~~~~~~i~~fl~~ 301 (348)
+++ .+ +++++++||+.++ ++|+++.+.|.+||++
T Consensus 339 ~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 339 LPN--LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp CTT--EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred CcC--cccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 887 66 9999999999996 8999999999999976
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-29 Score=209.07 Aligned_cols=246 Identities=13% Similarity=0.102 Sum_probs=164.8
Q ss_pred Cccceeec----CCceeEEEEccCC--CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 20 GKDNLIKT----SHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 20 ~~~~~v~~----~~~~l~~~~~g~~--~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
.+..++++ +|.+++|...+.. ++|+|||+||++++...|.... ....+...||+|+++|+||||.|...
T Consensus 9 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~~- 83 (270)
T 3llc_A 9 IETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALE----MDDLAASLGVGAIRFDYSGHGASGGA- 83 (270)
T ss_dssp EEEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHH----HHHHHHHHTCEEEEECCTTSTTCCSC-
T ss_pred CCcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccccchHHH----HHHHHHhCCCcEEEeccccCCCCCCc-
Confidence 34455666 8889999855433 3899999999998866543211 11233367999999999999998743
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh---CC---CCcceEEEecCCCCCCChHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK---YR---HRVLGLILVSPLCKAPSWTEWLYNKV 167 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~---~p---~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (348)
...++++++++|+.++++.++.++++++|||+||.+++.+|.+ +| ++|+++|++++........
T Consensus 84 ---~~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~------- 153 (270)
T 3llc_A 84 ---FRDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDL------- 153 (270)
T ss_dssp ---GGGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHT-------
T ss_pred ---cccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhh-------
Confidence 3458999999999999999999999999999999999999999 99 9999999999876521100
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEE
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 247 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 247 (348)
....+.......+........... .......... .+...... .+....+.++++|+++
T Consensus 154 -----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------------~~~~~~~~----~~~~~~~~~~~~P~l~ 211 (270)
T 3llc_A 154 -----IEPLLGDRERAELAENGYFEEVSE-YSPEPNIFTR------------ALMEDGRA----NRVMAGMIDTGCPVHI 211 (270)
T ss_dssp -----TGGGCCHHHHHHHHHHSEEEECCT-TCSSCEEEEH------------HHHHHHHH----TCCTTSCCCCCSCEEE
T ss_pred -----hhhhhhhhhhhhhhccCcccChhh-cccchhHHHH------------HHHhhhhh----hhhhhhhhcCCCCEEE
Confidence 000111111111111111100000 0000000000 01111111 1233456788999999
Q ss_pred EecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCcc-ccChhhhHHHHHHHHhhc
Q 018947 248 FVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVT-EEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 302 (348)
++|++|.++ .....+.+.+++...++++++++||+.. .+.++++.+.|.+||++.
T Consensus 212 i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 212 LQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp EEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC--
T ss_pred EecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcCC
Confidence 999999998 4556688888765589999999999655 478899999999999753
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=215.54 Aligned_cols=233 Identities=9% Similarity=0.059 Sum_probs=142.8
Q ss_pred cceeec-CCceeEEEEccCC-----CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC-CCCCCCCC
Q 018947 22 DNLIKT-SHGSLSVTIYGDQ-----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAIS 94 (348)
Q Consensus 22 ~~~v~~-~~~~l~~~~~g~~-----~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~~~ 94 (348)
.+.+.+ +|.+++|..+++. .+|+|||+||++.+...|. ..+..+..+||+|+++|+||| |.|+.+
T Consensus 9 ~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~------~~~~~L~~~G~~Vi~~D~rGh~G~S~~~-- 80 (305)
T 1tht_A 9 AHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFA------GLAEYLSTNGFHVFRYDSLHHVGLSSGS-- 80 (305)
T ss_dssp EEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGH------HHHHHHHTTTCCEEEECCCBCC--------
T ss_pred EEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchHHH------HHHHHHHHCCCEEEEeeCCCCCCCCCCc--
Confidence 334555 5568998887642 4689999999999876543 233455567999999999999 998743
Q ss_pred CCCCCCCHHHHHHHHHHHHHHc---CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
...++++++++|+.++++.+ +.++++++||||||.+++.+|.+ | +|+++|++++.... .... ...
T Consensus 81 --~~~~~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~---~~~~-----~~~ 148 (305)
T 1tht_A 81 --IDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNL---RDTL-----EKA 148 (305)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCH---HHHH-----HHH
T ss_pred --ccceehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhH---HHHH-----HHH
Confidence 23578999999998888754 78899999999999999999988 7 89999998765321 1110 000
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecC
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 251 (348)
. ........ . .... ........ ............. .. +....+....+.++++|+|+|+|+
T Consensus 149 ~-~~~~~~~~----~-~~~~-~~~~~~~~-~~~~~~~~~~~~~-~~----------~~~~~~~~~~l~~i~~PvLii~G~ 209 (305)
T 1tht_A 149 L-GFDYLSLP----I-DELP-NDLDFEGH-KLGSEVFVRDCFE-HH----------WDTLDSTLDKVANTSVPLIAFTAN 209 (305)
T ss_dssp H-SSCGGGSC----G-GGCC-SEEEETTE-EEEHHHHHHHHHH-TT----------CSSHHHHHHHHTTCCSCEEEEEET
T ss_pred h-hhhhhhcc----h-hhCc-cccccccc-ccCHHHHHHHHHh-cc----------ccchhhHHHHHhhcCCCEEEEEeC
Confidence 0 00000000 0 0000 00000000 0000000000000 00 000012345678899999999999
Q ss_pred CCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHH
Q 018947 252 SSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIP 294 (348)
Q Consensus 252 ~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 294 (348)
+|.+++ ....+++.++.+++++++++++||.++ ++|+.+.+.
T Consensus 210 ~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~~f 253 (305)
T 1tht_A 210 NDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNF 253 (305)
T ss_dssp TCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHH
T ss_pred CCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHHHHH
Confidence 999984 455677877655689999999999986 888754433
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-30 Score=215.92 Aligned_cols=240 Identities=11% Similarity=0.051 Sum_probs=167.7
Q ss_pred CCCccceeecCCceeEEEEccCC--CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~~--~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
...++.++..+|.+++|..+++. .+|+|||+||++++.... +|......+...||.|+++|+||||.|..+
T Consensus 20 ~~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~----~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~--- 92 (270)
T 3pfb_A 20 QGMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTS----LLREIANSLRDENIASVRFDFNGHGDSDGK--- 92 (270)
T ss_dssp CEEEEEEEEETTEEEEEEEEECSSSSEEEEEEECCTTCCTTCH----HHHHHHHHHHHTTCEEEEECCTTSTTSSSC---
T ss_pred ccceEEEeccCCEEEEEEEEcCCCCCCCEEEEEcCCCCCcccc----HHHHHHHHHHhCCcEEEEEccccccCCCCC---
Confidence 34466677889999999988753 467999999999874221 122333556678999999999999998743
Q ss_pred CCCCCCHHHHHHHHHHHHHHc----CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
...+++.++++|+.++++.+ +.++++++|||+||.+++.+|.++|++|+++|++++....... ..
T Consensus 93 -~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~-------~~--- 161 (270)
T 3pfb_A 93 -FENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGD-------AL--- 161 (270)
T ss_dssp -GGGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHH-------HH---
T ss_pred -CCccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchh-------hh---
Confidence 34578999999999999887 6689999999999999999999999999999999987642110 00
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecC
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 251 (348)
.. ... ...+.+..... .... ........+...... .+....+.++++|+++++|+
T Consensus 162 -~~-~~~--------~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~l~i~g~ 216 (270)
T 3pfb_A 162 -EG-NTQ--------GVTYNPDHIPD----RLPF-------KDLTLGGFYLRIAQQ----LPIYEVSAQFTKPVCLIHGT 216 (270)
T ss_dssp -HT-EET--------TEECCTTSCCS----EEEE-------TTEEEEHHHHHHHHH----CCHHHHHTTCCSCEEEEEET
T ss_pred -hh-hhh--------ccccCcccccc----cccc-------cccccchhHhhcccc----cCHHHHHhhCCccEEEEEcC
Confidence 00 000 00000000000 0000 000000011111111 35556678899999999999
Q ss_pred CCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 252 SSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+|.++ .....+.+.+++ +++++++++||+.+.++++++.+.|.+||++.
T Consensus 217 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 217 DDTVVSPNASKKYDQIYQN--STLHLIEGADHCFSDSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp TCSSSCTHHHHHHHHHCSS--EEEEEETTCCTTCCTHHHHHHHHHHHHHHC--
T ss_pred CCCCCCHHHHHHHHHhCCC--CeEEEcCCCCcccCccchHHHHHHHHHHHhhc
Confidence 99988 355567777776 89999999999999999999999999999876
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=197.21 Aligned_cols=195 Identities=16% Similarity=0.221 Sum_probs=159.0
Q ss_pred CccceeecCCceeE---EEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCC---CCCC
Q 018947 20 GKDNLIKTSHGSLS---VTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFG---AAAI 93 (348)
Q Consensus 20 ~~~~~v~~~~~~l~---~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S---~~~~ 93 (348)
.++.++.+++.+++ |...| ++|+|||+||++++...|... .....+..+||.|+++|+||+|.| ..+
T Consensus 4 ~~~~~~~~~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~- 76 (207)
T 3bdi_A 4 LQEEFIDVNGTRVFQRKMVTDS--NRRSIALFHGYSFTSMDWDKA----DLFNNYSKIGYNVYAPDYPGFGRSASSEKY- 76 (207)
T ss_dssp CEEEEEEETTEEEEEEEECCTT--CCEEEEEECCTTCCGGGGGGG----THHHHHHTTTEEEEEECCTTSTTSCCCTTT-
T ss_pred ceeEEEeeCCcEEEEEEEeccC--CCCeEEEECCCCCCccccchH----HHHHHHHhCCCeEEEEcCCcccccCcccCC-
Confidence 46677888999999 54444 678999999999887654321 023566677999999999999998 533
Q ss_pred CCCCCCC-CHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHH
Q 018947 94 SDDEPVL-SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (348)
Q Consensus 94 ~~~~~~~-~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (348)
...+ +++++++++..+++.++.++++++|||+||.+++.++.++|+++++++++++......
T Consensus 77 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------- 139 (207)
T 3bdi_A 77 ---GIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVESL-------------- 139 (207)
T ss_dssp ---CCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGGG--------------
T ss_pred ---CCCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccch--------------
Confidence 2345 8999999999999999999999999999999999999999999999999998733110
Q ss_pred HhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCC
Q 018947 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (348)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~ 252 (348)
...+.++++|+++++|++
T Consensus 140 --------------------------------------------------------------~~~~~~~~~p~l~i~g~~ 157 (207)
T 3bdi_A 140 --------------------------------------------------------------KGDMKKIRQKTLLVWGSK 157 (207)
T ss_dssp --------------------------------------------------------------HHHHTTCCSCEEEEEETT
T ss_pred --------------------------------------------------------------hHHHhhccCCEEEEEECC
Confidence 122346679999999999
Q ss_pred CCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 253 SPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 253 D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|.+++ ....+.+.+++ .++++++++||..+.++++++.+.|.+||+++
T Consensus 158 D~~~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 207 (207)
T 3bdi_A 158 DHVVPIALSKEYASIISG--SRLEIVEGSGHPVYIEKPEEFVRITVDFLRNL 207 (207)
T ss_dssp CTTTTHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CCccchHHHHHHHHhcCC--ceEEEeCCCCCCccccCHHHHHHHHHHHHhhC
Confidence 99983 45567777766 89999999999999999999999999999863
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-30 Score=214.74 Aligned_cols=253 Identities=10% Similarity=0.104 Sum_probs=167.1
Q ss_pred EEecCCCCCCCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCC
Q 018947 10 SIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFG 89 (348)
Q Consensus 10 ~~~~~~~~~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S 89 (348)
+++.++-....++.++..++.+++|.. | ++|+|||+||++++...|. ..+..+...||.|+++|+||||.|
T Consensus 11 ~~~~~~~~~~m~~~~~~~~g~~~~~~~-g--~~~~vv~~HG~~~~~~~~~------~~~~~l~~~G~~v~~~d~~G~G~s 81 (270)
T 3rm3_A 11 SSGLVPRGSHMSEQYPVLSGAEPFYAE-N--GPVGVLLVHGFTGTPHSMR------PLAEAYAKAGYTVCLPRLKGHGTH 81 (270)
T ss_dssp ----------CCCSSCCCTTCCCEEEC-C--SSEEEEEECCTTCCGGGTH------HHHHHHHHTTCEEEECCCTTCSSC
T ss_pred ccCccccccccCCCccCCCCCcccccC-C--CCeEEEEECCCCCChhHHH------HHHHHHHHCCCEEEEeCCCCCCCC
Confidence 344444444555666777888887763 4 6799999999998876543 233556667999999999999998
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH
Q 018947 90 AAAISDDEPVLSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (348)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (348)
..+ ...++++++++|+.++++.+. .++++++|||+||.+++.+|.++|+ |+++|++++..............
T Consensus 82 ~~~----~~~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~- 155 (270)
T 3rm3_A 82 YED----MERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGG- 155 (270)
T ss_dssp HHH----HHTCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC--
T ss_pred ccc----cccCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcc-
Confidence 642 235789999999999999987 7899999999999999999999999 99999999877542221110000
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEE
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 247 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 247 (348)
....... ..+ ......... .. .................. .+....+.++++|+|+
T Consensus 156 -------~~~~~~~-----~~~-~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~li 210 (270)
T 3rm3_A 156 -------GELPRYL-----DSI-GSDLKNPDV--KE-------LAYEKTPTASLLQLARLM---AQTKAKLDRIVCPALI 210 (270)
T ss_dssp ---------CCSEE-----ECC-CCCCSCTTC--CC-------CCCSEEEHHHHHHHHHHH---HHHHHTGGGCCSCEEE
T ss_pred -------hhHHHHH-----HHh-Cccccccch--Hh-------hcccccChhHHHHHHHHH---HHHHhhhhhcCCCEEE
Confidence 0000000 000 000000000 00 000000111111111111 2344567889999999
Q ss_pred EecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccCh-hhhHHHHHHHHhhc
Q 018947 248 FVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP-HAMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~~~ 302 (348)
++|++|.++ .....+.+.+++.+.++++++++||+.+.+.+ +++.+.|.+||++.
T Consensus 211 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 211 FVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp EEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred EECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 999999998 45667888888755699999999999999887 89999999999875
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-28 Score=214.57 Aligned_cols=272 Identities=10% Similarity=0.068 Sum_probs=159.7
Q ss_pred cceeecCCceeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhcc------CCeEEEEeCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL------HNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~------~g~~vi~~D~~G~G~S~~~~ 93 (348)
...+.++|.+++|...|+ +++++|||+||++++...|.... ..+.. .||+||++|+||||.|+.+.
T Consensus 87 ~~~~~i~g~~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~------~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~ 160 (408)
T 3g02_A 87 QFTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPIL------QLFREEYTPETLPFHLVVPSLPGYTFSSGPP 160 (408)
T ss_dssp EEEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHH------HHHHHHCCTTTCCEEEEEECCTTSTTSCCSC
T ss_pred CEEEEECCEEEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHH------HHHhcccccccCceEEEEECCCCCCCCCCCC
Confidence 345667899999999875 46789999999999987764322 33333 48999999999999998652
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCC-ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC--------ChHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP--------SWTEWLY 164 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--------~~~~~~~ 164 (348)
....++++++++++.+++++++.+ +++++||||||.+++.+|.++|+.+..++.+.+..... .......
T Consensus 161 --~~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~~~~~~l~~~e~~~ 238 (408)
T 3g02_A 161 --LDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEGPSIESLSAAEKEG 238 (408)
T ss_dssp --SSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTCCCGGGSCHHHHHH
T ss_pred --CCCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCcccccccCCCHHHHHH
Confidence 124689999999999999999997 99999999999999999999976444444333332211 0111110
Q ss_pred HHHHHHHHHh-hcc------ch------------hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHH
Q 018947 165 NKVMSNLLYY-YGM------CG------------VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFL 225 (348)
Q Consensus 165 ~~~~~~~~~~-~~~------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (348)
.......... .+. .. ....++..++.... ......+++.......+...........+
T Consensus 239 ~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~---d~~~~~d~ll~~v~~y~~t~~~~~s~~~y 315 (408)
T 3g02_A 239 IARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWV---DKPLPSETILEMVSLYWLTESFPRAIHTY 315 (408)
T ss_dssp HHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSC---SSCCCHHHHHHHHHHHHHTTHHHHHGGGH
T ss_pred HHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhcc---CCCCCHHHHHHHHHHHHhhccchhHHHHH
Confidence 0111110000 000 00 00001111111000 00000122222222111111111111111
Q ss_pred HHHcCCccH--Hh----hhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHH
Q 018947 226 EAINGRPDI--SE----GLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 299 (348)
Q Consensus 226 ~~~~~~~~~--~~----~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 299 (348)
......... .. .+..+++|+++++|.+|...... ...+...+ .+.+.+++++||++++|+|+.+++.|.+||
T Consensus 316 ~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~-~~~~~~~~-~~~~~~~~~gGHf~~lE~Pe~~~~~l~~fl 393 (408)
T 3g02_A 316 REWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPR-SWIATTGN-LVFFRDHAEGGHFAALERPRELKTDLTAFV 393 (408)
T ss_dssp HHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCCCH-HHHGGGEE-EEEEEECSSCBSCHHHHCHHHHHHHHHHHH
T ss_pred HhhcccccccccccccccCCCcCCCEEEEeCCcccccCcH-HHHHhcCC-eeEEEECCCCcCchhhhCHHHHHHHHHHHH
Confidence 111111100 01 45678999999999999665322 33333332 377899999999999999999999999999
Q ss_pred hhccccC
Q 018947 300 MGYGLYR 306 (348)
Q Consensus 300 ~~~~~~~ 306 (348)
+++....
T Consensus 394 ~~~~~~~ 400 (408)
T 3g02_A 394 EQVWQKG 400 (408)
T ss_dssp HHHC---
T ss_pred HHHHHcC
Confidence 9875433
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-27 Score=199.53 Aligned_cols=221 Identities=11% Similarity=0.020 Sum_probs=154.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHcCCC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL-SVDDLADQIAEVLNHFGLG 119 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~-~~~~~~~dl~~~l~~l~~~ 119 (348)
++|+|||+||++++...|. .....+..+||+|+++|+||||.|.... .... +++++++|+.++++.+...
T Consensus 21 ~~~~vv~~HG~~~~~~~~~------~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~~~~~~~~~~~~d~~~~i~~l~~~ 91 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMN------FMARALQRSGYGVYVPLFSGHGTVEPLD---ILTKGNPDIWWAESSAAVAHMTAK 91 (251)
T ss_dssp SSEEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEECCCTTCSSSCTHH---HHHHCCHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEeCCCCCCHHHHH------HHHHHHHHCCCEEEecCCCCCCCCChhh---hcCcccHHHHHHHHHHHHHHHHHh
Confidence 6789999999999887642 2335566689999999999999985321 1123 8889999999998887654
Q ss_pred --ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCC
Q 018947 120 --AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGN 197 (348)
Q Consensus 120 --~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (348)
+++++|||+||.+++.+|.++|+++++++++++................ ..+.. .......
T Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~--------------~~~~~-~~~~~~~-- 154 (251)
T 3dkr_A 92 YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYA--------------EYMNR-LAGKSDE-- 154 (251)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHH--------------HHHHH-HHTCCCC--
T ss_pred cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHH--------------HHHHh-hcccCcc--
Confidence 9999999999999999999999999999999988775433221111111 01111 1110000
Q ss_pred CCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhcc-CCcEEE
Q 018947 198 AQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR-RYSALV 274 (348)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~-~~~~~~ 274 (348)
........... ........ .+....+.++++|+++++|++|.++ .....+.+.+++ ...+++
T Consensus 155 ----~~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 219 (251)
T 3dkr_A 155 ----STQILAYLPGQ--------LAAIDQFA---TTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFH 219 (251)
T ss_dssp ----HHHHHHHHHHH--------HHHHHHHH---HHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEE
T ss_pred ----hhhHHhhhHHH--------HHHHHHHH---HHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEE
Confidence 11111111111 00111100 1234557788999999999999998 456668888887 567999
Q ss_pred EecCCCCCccccC-hhhhHHHHHHHHhhc
Q 018947 275 EVQACGSMVTEEQ-PHAMLIPMEYFLMGY 302 (348)
Q Consensus 275 ~~~~~gH~~~~e~-p~~~~~~i~~fl~~~ 302 (348)
+++++||+.+.+. ++++.+.|.+||+++
T Consensus 220 ~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 220 WYDDAKHVITVNSAHHALEEDVIAFMQQE 248 (251)
T ss_dssp EETTCCSCTTTSTTHHHHHHHHHHHHHTT
T ss_pred EeCCCCcccccccchhHHHHHHHHHHHhh
Confidence 9999999999885 999999999999986
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=200.04 Aligned_cols=196 Identities=15% Similarity=0.224 Sum_probs=156.7
Q ss_pred CccceeecCCceeEEEEccC---CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 20 GKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
.++.++..++.+++|..+++ +.+|+|||+||++++...|... .....+..+||.|+++|+||+|.|..+.
T Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~g~s~~~~--- 79 (210)
T 1imj_A 7 QREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNL----GTLHRLAQAGYRAVAIDLPGLGHSKEAA--- 79 (210)
T ss_dssp ECCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHH----THHHHHHHTTCEEEEECCTTSGGGTTSC---
T ss_pred cccceEeeCCeEEEEEEeCCCCCCCCceEEEECCCCCccceeecc----hhHHHHHHCCCeEEEecCCCCCCCCCCC---
Confidence 45567888999999998743 4678999999999988765321 0124566779999999999999987542
Q ss_pred CCCCCHHHHH--HHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 97 EPVLSVDDLA--DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 97 ~~~~~~~~~~--~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
...++++.+ +++.++++.++.++++++|||+||.+++.+|.++|++++++|++++.....
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------------- 141 (210)
T 1imj_A 80 -APAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK----------------- 141 (210)
T ss_dssp -CSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG-----------------
T ss_pred -CcchhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc-----------------
Confidence 335566666 899999999999999999999999999999999999999999998864310
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
.....+.++++|+++++|++|.
T Consensus 142 ----------------------------------------------------------~~~~~~~~~~~p~l~i~g~~D~ 163 (210)
T 1imj_A 142 ----------------------------------------------------------INAANYASVKTPALIVYGDQDP 163 (210)
T ss_dssp ----------------------------------------------------------SCHHHHHTCCSCEEEEEETTCH
T ss_pred ----------------------------------------------------------ccchhhhhCCCCEEEEEcCccc
Confidence 0012234678999999999999
Q ss_pred CC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 255 FH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 255 ~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+ ...+.+ +.+++ .++++++++||+.+.++|+++.+.|.+||+++
T Consensus 164 -~~~~~~~~~-~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 164 -MGQTSFEHL-KQLPN--HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp -HHHHHHHHH-TTSSS--EEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred -CCHHHHHHH-hhCCC--CCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 8 344455 66665 89999999999999999999999999999875
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=201.61 Aligned_cols=225 Identities=18% Similarity=0.233 Sum_probs=148.0
Q ss_pred CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018947 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (348)
Q Consensus 39 ~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~ 118 (348)
+..+|+|||+||++++...|.. . ...+.++|+|+++|+||||.|... ...++++++++++.++++.++.
T Consensus 17 ~~~~~~vv~~HG~~~~~~~~~~------~-~~~l~~~~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~~~~~l~~~~~ 85 (267)
T 3fla_A 17 PDARARLVCLPHAGGSASFFFP------L-AKALAPAVEVLAVQYPGRQDRRHE----PPVDSIGGLTNRLLEVLRPFGD 85 (267)
T ss_dssp TTCSEEEEEECCTTCCGGGGHH------H-HHHHTTTEEEEEECCTTSGGGTTS----CCCCSHHHHHHHHHHHTGGGTT
T ss_pred CCCCceEEEeCCCCCCchhHHH------H-HHHhccCcEEEEecCCCCCCCCCC----CCCcCHHHHHHHHHHHHHhcCC
Confidence 3567899999999998765432 1 355566799999999999998743 2457999999999999999999
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCC----cceEEEecCCCCCCChHHH---HHHHHHHHHHHhhccchhHHHHHHHhhhc
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEW---LYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (348)
++++|+||||||.+++.+|.++|++ +++++++++.......... .........+.... ... ... +.
T Consensus 86 ~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~----~~ 158 (267)
T 3fla_A 86 RPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLG--GSD-AAM----LA 158 (267)
T ss_dssp SCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTC--HHH-HHH----HH
T ss_pred CceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhc--Ccc-hhh----cc
Confidence 9999999999999999999999987 9999999876543211000 00000000000000 000 000 00
Q ss_pred ccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccC
Q 018947 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRR 269 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~ 269 (348)
.......+...+.. .......+.. .. ...+++|+++++|++|.+++ ....+.+.+++
T Consensus 159 ----------~~~~~~~~~~~~~~-----~~~~~~~~~~----~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 217 (267)
T 3fla_A 159 ----------DPELLAMVLPAIRS-----DYRAVETYRH----EP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG- 217 (267)
T ss_dssp ----------SHHHHHHHHHHHHH-----HHHHHHHCCC----CT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS-
T ss_pred ----------CHHHHHHHHHHHHH-----HHHhhhcccc----cc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC-
Confidence 11122221111110 0111111111 11 16789999999999999984 34446666654
Q ss_pred CcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 270 YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 270 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
..+++++++ ||+.+.++|+++++.|.+||++..
T Consensus 218 ~~~~~~~~g-gH~~~~~~~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 218 PADLRVLPG-GHFFLVDQAAPMIATMTEKLAGPA 250 (267)
T ss_dssp CEEEEEESS-STTHHHHTHHHHHHHHHHHTC---
T ss_pred CceEEEecC-CceeeccCHHHHHHHHHHHhcccc
Confidence 479999997 999999999999999999998874
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-28 Score=206.92 Aligned_cols=232 Identities=6% Similarity=-0.036 Sum_probs=145.6
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccC--CeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 117 (348)
+.+++|||+||++++...|. .....+..+ ||+|+++|+||||.|..+ ..++++++++++.++++.+
T Consensus 34 ~~~~~vvllHG~~~~~~~~~------~~~~~L~~~~~g~~vi~~D~~G~G~s~~~-----~~~~~~~~~~~l~~~~~~~- 101 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSYSFR------HLLEYINETHPGTVVTVLDLFDGRESLRP-----LWEQVQGFREAVVPIMAKA- 101 (302)
T ss_dssp -CCCCEEEECCTTCCGGGGH------HHHHHHHHHSTTCCEEECCSSCSGGGGSC-----HHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCeEEEECCCCCChhHHH------HHHHHHHhcCCCcEEEEeccCCCccchhh-----HHHHHHHHHHHHHHHhhcC-
Confidence 46789999999999987653 222445555 899999999999998643 2367899999999999988
Q ss_pred CCceeEEEeChhHHHHHHHHHhCCC-CcceEEEecCCCCCCChH-HHHHHHHHHHHHHhhccchhHHHHHHHhhhccccc
Q 018947 118 LGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCKAPSWT-EWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (348)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
.++++++||||||.+++.+|.++|+ +|+++|++++........ .... .. .............+.....
T Consensus 102 ~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~ 171 (302)
T 1pja_A 102 PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLK-WL---------FPTSMRSNLYRICYSPWGQ 171 (302)
T ss_dssp TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHH-HH---------CTTCCHHHHHHHHTSTTGG
T ss_pred CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhh-hH---------HHHHHHHHHhhccchHHHH
Confidence 6899999999999999999999999 799999999876542211 1110 00 0000000000001110000
Q ss_pred CCCC---CCChHHHHHHHHHHhhhchhhHHHHHHHHcC---CccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhc
Q 018947 196 GNAQ---VPESDIVQACRRLLDERQSSNVWHFLEAING---RPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKID 267 (348)
Q Consensus 196 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~ 267 (348)
.... ...+.....+.. ...+...+..... ..++.+.+.+++ |+++|+|++|.+++ ....+.+..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~ 244 (302)
T 1pja_A 172 EFSICNYWHDPHHDDLYLN------ASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDA 244 (302)
T ss_dssp GSTGGGGBCCTTCHHHHHH------HCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECT
T ss_pred HhhhhhcccChhhhhhhhc------cchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCC
Confidence 0000 000010111110 0011111111000 012456788899 99999999999883 3333333222
Q ss_pred c-------------------------CCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 268 R-------------------------RYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 268 ~-------------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+ .++++++++++||+++.|+|+++++.|.+||+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 245 NETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWLS 302 (302)
T ss_dssp TCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGCC
T ss_pred cccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhcC
Confidence 1 12889999999999999999999999999874
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-27 Score=210.25 Aligned_cols=268 Identities=12% Similarity=0.067 Sum_probs=154.6
Q ss_pred CceeEEEEccCCCCCeEEEeCCCCCChhhhccccccc-----------hhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC
Q 018947 29 HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFC-----------PEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (348)
Q Consensus 29 ~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~-----------~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~ 97 (348)
+..++|...+.+++|+|||+||++++...|... .|. ..+..+..+||+|+++|+||||.|........
T Consensus 37 ~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 115 (354)
T 2rau_A 37 IISLHKVNLIGGGNDAVLILPGTWSSGEQLVTI-SWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQL 115 (354)
T ss_dssp EEEEEEEEETTCCEEEEEEECCTTCCHHHHHHS-EETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGG
T ss_pred ceEEEeecccCCCCCEEEEECCCCCCccccccc-cccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccccccc
Confidence 345666665556789999999999987643200 011 23345556799999999999999874321000
Q ss_pred ---CCCCHHHHHHHHHHHHHH----cCCCceeEEEeChhHHHHHHHHHhC-CCCcceEEEecCCCCCCChHHHHH---HH
Q 018947 98 ---PVLSVDDLADQIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKY-RHRVLGLILVSPLCKAPSWTEWLY---NK 166 (348)
Q Consensus 98 ---~~~~~~~~~~dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~---~~ 166 (348)
..++++++++|+.++++. ++.++++++||||||.+++.+|.++ |++|+++|++++.+.......... ..
T Consensus 116 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 195 (354)
T 2rau_A 116 SFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVN 195 (354)
T ss_dssp GGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCS
T ss_pred ccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhh
Confidence 157889999999998877 5788999999999999999999999 999999999976544211100000 00
Q ss_pred HHHHHHHhh-----ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHh---hhch--------hhHHHHHHH---
Q 018947 167 VMSNLLYYY-----GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLD---ERQS--------SNVWHFLEA--- 227 (348)
Q Consensus 167 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~--- 227 (348)
......... ..............+......... ........+..... ...+ ..+...+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (354)
T 2rau_A 196 SIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDP-KYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDP 274 (354)
T ss_dssp SHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSST-TSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCS
T ss_pred hHHHhhhhcccccCCCchhhhHHHHHhccccccCcccc-chhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhcc
Confidence 000000000 000000000000011110000000 00011111111000 0000 001111110
Q ss_pred -----HcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccCh---hhhHHHHHHHH
Q 018947 228 -----INGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQP---HAMLIPMEYFL 299 (348)
Q Consensus 228 -----~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl 299 (348)
.....+....+.++++|+|+|+|++|.+++.. .+.+. +++++++++++||+++++++ +++++.|.+||
T Consensus 275 ~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~---~~~l~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 350 (354)
T 2rau_A 275 YWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIFD---SKILP-SNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWL 350 (354)
T ss_dssp EEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHBC---GGGSC-TTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHH
T ss_pred ccccccccCcccccccccCCCCEEEEecCCCCCCccc---hhhhc-cCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHH
Confidence 00113445567899999999999999875321 22222 24899999999999988765 99999999999
Q ss_pred hhc
Q 018947 300 MGY 302 (348)
Q Consensus 300 ~~~ 302 (348)
+++
T Consensus 351 ~~~ 353 (354)
T 2rau_A 351 SQQ 353 (354)
T ss_dssp HHH
T ss_pred Hhc
Confidence 875
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=186.42 Aligned_cols=209 Identities=12% Similarity=0.093 Sum_probs=147.6
Q ss_pred eEEecCCCCCCCc--cceeecCCceeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCC
Q 018947 9 VSIDMETPPPSGK--DNLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP 84 (348)
Q Consensus 9 ~~~~~~~~~~~~~--~~~v~~~~~~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 84 (348)
.+.+.+....+.+ +..+.+.++++.+..+.+ +..|+|||+||++.....+.. ..|......+...||.|+++|+|
T Consensus 10 ~~~~~~~~~~~~e~~~~~~~~~~g~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~ 88 (249)
T 2i3d_A 10 HSSGRENLYFQGHMPEVIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNN-QIVYQLFYLFQKRGFTTLRFNFR 88 (249)
T ss_dssp --------------CEEEEEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTS-HHHHHHHHHHHHTTCEEEEECCT
T ss_pred cccccccccccCceeEEEEECCCceEEEEEEcCCCCCCCEEEEECCCcccCCCccc-hHHHHHHHHHHHCCCEEEEECCC
Confidence 3344444444444 778888777887766543 467899999998654332211 11223445666789999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh
Q 018947 85 GHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159 (348)
Q Consensus 85 G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 159 (348)
|+|.|.... ..+..++ +|+.++++.+. .++++++|||+||.+++.+|.++|+ |+++|++++......
T Consensus 89 g~G~s~~~~-----~~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~- 160 (249)
T 2i3d_A 89 SIGRSQGEF-----DHGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD- 160 (249)
T ss_dssp TSTTCCSCC-----CSSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-
T ss_pred CCCCCCCCC-----CCccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-
Confidence 999987542 2345555 77777665553 2479999999999999999999998 999999998765100
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhc
Q 018947 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 239 (348)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 239 (348)
...+.
T Consensus 161 ---------------------------------------------------------------------------~~~~~ 165 (249)
T 2i3d_A 161 ---------------------------------------------------------------------------FSFLA 165 (249)
T ss_dssp ---------------------------------------------------------------------------CTTCT
T ss_pred ---------------------------------------------------------------------------hhhhc
Confidence 01134
Q ss_pred cCCccEEEEecCCCCCCc--hHHHHHHhhccC---CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 240 KLQCRSLIFVGESSPFHS--EAVHMTSKIDRR---YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 240 ~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++++|+++++|++|.+++ ....+.+.++.. ..++++++++||... ++++++.+.|.+||++.
T Consensus 166 ~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~~ 232 (249)
T 2i3d_A 166 PCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRR 232 (249)
T ss_dssp TCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHHHHHh
Confidence 678999999999999984 556677887732 489999999999988 89999999999999886
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-25 Score=179.20 Aligned_cols=200 Identities=18% Similarity=0.134 Sum_probs=142.1
Q ss_pred CCCccceeecCCceeEEEEccCC---CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
...++..+.+.++++++..+.+. .+|+||++||.+..+..... .+|......+...||.|+++|+||+|.|.....
T Consensus 4 ~~~~~~~~~~~~g~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 82 (208)
T 3trd_A 4 MTNEDFLIQGPVGQLEVMITRPKGIEKSVTGIICHPHPLHGGTMNN-KVVTTLAKALDELGLKTVRFNFRGVGKSQGRYD 82 (208)
T ss_dssp CSSSCEEEECSSSEEEEEEECCSSCCCSEEEEEECSCGGGTCCTTC-HHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC
T ss_pred cccceEEEECCCceEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCC-chHHHHHHHHHHCCCEEEEEecCCCCCCCCCcc
Confidence 44566677776669988877643 56899999995322111111 112233356667899999999999999875421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 95 DDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
......+++.+.+..+.+.++.++++++|||+||.+++.++ .+| +|+++|++++....
T Consensus 83 --~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~------------------ 140 (208)
T 3trd_A 83 --NGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY------------------ 140 (208)
T ss_dssp --TTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS------------------
T ss_pred --chHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc------------------
Confidence 22233455555555555556678999999999999999999 777 89999999987600
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
.+ ...+..+++|+++++|++|.
T Consensus 141 ---------------------------------------------------------~~-~~~~~~~~~p~l~i~g~~D~ 162 (208)
T 3trd_A 141 ---------------------------------------------------------EG-FASLTQMASPWLIVQGDQDE 162 (208)
T ss_dssp ---------------------------------------------------------GG-GTTCCSCCSCEEEEEETTCS
T ss_pred ---------------------------------------------------------CC-chhhhhcCCCEEEEECCCCC
Confidence 00 01234458999999999999
Q ss_pred CCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 255 FHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 255 ~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
+++ ....+.+.+++. .++++++++||+...+. +++.+.|.+||.
T Consensus 163 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~-~~~~~~i~~fl~ 208 (208)
T 3trd_A 163 VVPFEQVKAFVNQISSP-VEFVVMSGASHFFHGRL-IELRELLVRNLA 208 (208)
T ss_dssp SSCHHHHHHHHHHSSSC-CEEEEETTCCSSCTTCH-HHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHccCc-eEEEEeCCCCCcccccH-HHHHHHHHHHhC
Confidence 983 455677777653 89999999999988765 889999999974
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.3e-26 Score=192.41 Aligned_cols=224 Identities=13% Similarity=0.093 Sum_probs=159.8
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
+...+..++.++.+..+++...|+|||+||++++...|. .....+...||.|+++|+||+|.|..+ ...+
T Consensus 7 ~~~~~~~~g~~l~~~~~~p~~~p~vv~~HG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~g~s~~~----~~~~ 76 (290)
T 3ksr_A 7 SSIEIPVGQDELSGTLLTPTGMPGVLFVHGWGGSQHHSL------VRAREAVGLGCICMTFDLRGHEGYASM----RQSV 76 (290)
T ss_dssp EEEEEEETTEEEEEEEEEEESEEEEEEECCTTCCTTTTH------HHHHHHHTTTCEEECCCCTTSGGGGGG----TTTC
T ss_pred eeEEecCCCeEEEEEEecCCCCcEEEEeCCCCCCcCcHH------HHHHHHHHCCCEEEEeecCCCCCCCCC----cccc
Confidence 445566788899998887667899999999998876543 233556667999999999999998754 3457
Q ss_pred CHHHHHHHHHHHHHHcC------CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 101 SVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
++.++++|+.++++.+. .++++++||||||.+++.++.++| ++++++++|.......... ..... ..
T Consensus 77 ~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~--~~~~~---~~ 149 (290)
T 3ksr_A 77 TRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQ--PKVSL---NA 149 (290)
T ss_dssp BHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTS--BHHHH---HH
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhc--ccccc---cC
Confidence 89999999999998873 247999999999999999999988 8899999887764321000 00000 00
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
...+..+..... .. ...+....+.++++|+|+++|++|.
T Consensus 150 --------~~~~~~~~~~~~--------------------~~-------------~~~~~~~~~~~~~~P~lii~G~~D~ 188 (290)
T 3ksr_A 150 --------DPDLMDYRRRAL--------------------AP-------------GDNLALAACAQYKGDVLLVEAENDV 188 (290)
T ss_dssp --------STTHHHHTTSCC--------------------CG-------------GGCHHHHHHHHCCSEEEEEEETTCS
T ss_pred --------Chhhhhhhhhhh--------------------hh-------------ccccHHHHHHhcCCCeEEEEecCCc
Confidence 000000000000 00 0012333456788999999999999
Q ss_pred CCc--hHHHHHHhhccCC-cEEEEecCCCCCccc-cChhhhHHHHHHHHhhc
Q 018947 255 FHS--EAVHMTSKIDRRY-SALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 255 ~~~--~~~~~~~~~~~~~-~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 302 (348)
+++ ....+.+.+++.. .++++++++||..+. ++++++.+.+.+||++.
T Consensus 189 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 240 (290)
T 3ksr_A 189 IVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEM 240 (290)
T ss_dssp SSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 983 4566888887633 669999999998766 48899999999999876
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=193.11 Aligned_cols=237 Identities=9% Similarity=0.061 Sum_probs=137.8
Q ss_pred ceeEEEEcc-C-CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeC----CCCCCCCCCCCCCCCCCCCHH
Q 018947 30 GSLSVTIYG-D-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN----PPGHEFGAAAISDDEPVLSVD 103 (348)
Q Consensus 30 ~~l~~~~~g-~-~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D----~~G~G~S~~~~~~~~~~~~~~ 103 (348)
..++|..+| + ..+|+|||+||++.+...|. +|... ...+..||+|+++| +||||.|+.+ ...+
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~---~~~~l-~~~L~~g~~Vi~~Dl~~D~~G~G~S~~~-------~~~~ 92 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSFD---YFTNL-AEELQGDWAFVQVEVPSGKIGSGPQDHA-------HDAE 92 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCST---THHHH-HHHHTTTCEEEEECCGGGBTTSCSCCHH-------HHHH
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccchh---HHHHH-HHHHHCCcEEEEEeccCCCCCCCCcccc-------CcHH
Confidence 678888777 3 35689999999987654331 12222 34457899999995 5999987421 1233
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHH--hCCCCcceEEEecCCCCCCCh--HHHHHHH---HHHHHHHhhc
Q 018947 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAM--KYRHRVLGLILVSPLCKAPSW--TEWLYNK---VMSNLLYYYG 176 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~~~~~--~~~~~~~---~~~~~~~~~~ 176 (348)
++.+.+..+.+.++.++++|+||||||.+++.+|. .+|++|+++|++++....... ....... ..........
T Consensus 93 d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (335)
T 2q0x_A 93 DVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGR 172 (335)
T ss_dssp HHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhccC
Confidence 33333444444578899999999999999999999 579999999999986543210 0000000 0000000000
Q ss_pred cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHc--CCccHHhhhccCCccEEEEecCCCC
Q 018947 177 MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAIN--GRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
..... . ...++ . .......+... ........++.... ...+..+.+.++++|+|+|+|++|.
T Consensus 173 ~~~~~-~--~~~~~-----~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~ 236 (335)
T 2q0x_A 173 GEDSL-A--MLKHY-----D-----IPITPARLAGG---GFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQ 236 (335)
T ss_dssp TTCGG-G--GTTTC-----S-----SCCCHHHHHTC---SCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTT
T ss_pred ccccc-c--chhhc-----c-----CccCHHHHhhc---cCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCC
Confidence 00000 0 00000 0 00000111100 00000111111111 1134556788999999999999999
Q ss_pred CCch-------HHHHHHhhccCCcE--------E-----EEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 255 FHSE-------AVHMTSKIDRRYSA--------L-----VEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 255 ~~~~-------~~~~~~~~~~~~~~--------~-----~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
+++. .+.+.+.+++ .+ + ++++++|| ++++.|.+||++..
T Consensus 237 ~vp~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~i~~agH--------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 237 YKPSDEEVGTVLEGVRDHTGC--NRVTVSYFNDTCDELRRVLKAAES--------EHVAAILQFLADED 295 (335)
T ss_dssp CCCCHHHHHHHHHHHHHHSSS--SCEEEEECCCEECTTSCEEECCHH--------HHHHHHHHHHHHHH
T ss_pred CCChhhhHHHHHHHHHHhcCc--cccccccccchhhhhhcccCCCCC--------HHHHHHHHHHHhhh
Confidence 9843 2446666776 55 6 88999999 45899999998753
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-25 Score=199.53 Aligned_cols=258 Identities=13% Similarity=0.081 Sum_probs=159.2
Q ss_pred CCCCccceeecCCceeEEEEc--cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 17 PPSGKDNLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 17 ~~~~~~~~v~~~~~~l~~~~~--g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
....++..+..++.++..+.+ +++..|+|||+||++++...|.... ...++..||+|+++|+||+|.|.....
T Consensus 132 ~~~~~~~~i~~~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-----~~~~~~~g~~vi~~D~~G~G~s~~~~~ 206 (405)
T 3fnb_A 132 KIPLKSIEVPFEGELLPGYAIISEDKAQDTLIVVGGGDTSREDLFYML-----GYSGWEHDYNVLMVDLPGQGKNPNQGL 206 (405)
T ss_dssp SCCCEEEEEEETTEEEEEEEECCSSSCCCEEEEECCSSCCHHHHHHHT-----HHHHHHTTCEEEEECCTTSTTGGGGTC
T ss_pred CCCcEEEEEeECCeEEEEEEEcCCCCCCCEEEEECCCCCCHHHHHHHH-----HHHHHhCCcEEEEEcCCCCcCCCCCCC
Confidence 344566677778888765444 3344589999999998887764222 125568899999999999999853311
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (348)
.+.. ++.+|+.++++.+.. ++++++|||+||.+++.+|.++| +|+++|++++......... .......
T Consensus 207 ----~~~~-~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~----~~~~~~~ 276 (405)
T 3fnb_A 207 ----HFEV-DARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFR----ISFSTAL 276 (405)
T ss_dssp ----CCCS-CTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHH----HHCC---
T ss_pred ----CCCc-cHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHH----Hhhhhhh
Confidence 1122 457778888888776 79999999999999999999999 9999999998775321110 0000000
Q ss_pred HhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCC
Q 018947 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (348)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~ 252 (348)
... ......+..... . ........+...............+..+.. ......+.++++|+|+|+|++
T Consensus 277 ---~~p----~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~PvLii~G~~ 343 (405)
T 3fnb_A 277 ---KAP----KTILKWGSKLVT-S----VNKVAEVNLNKYAWQFGQVDFITSVNEVLE-QAQIVDYNKIDVPSLFLVGAG 343 (405)
T ss_dssp -----------------------C----CCHHHHHHHHHHHHHHTSSSHHHHHHHHHH-HCCCCCGGGCCSCEEEEEETT
T ss_pred ---hCc----HHHHHHHHHHhh-c----cchhHHHHHHHhhhhcCCCCHHHHHHHHHH-hhcccCHhhCCCCEEEEecCC
Confidence 000 000000000000 0 011111111111111111122221111110 011112678899999999999
Q ss_pred CCCC--chHHHHHHhhcc--CCcEEEEe---cCCCCCccccChhhhHHHHHHHHhhc
Q 018947 253 SPFH--SEAVHMTSKIDR--RYSALVEV---QACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 253 D~~~--~~~~~~~~~~~~--~~~~~~~~---~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|.++ .....+.+.+++ ...+++++ +++||.++.++++.+.+.|.+||++.
T Consensus 344 D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~ 400 (405)
T 3fnb_A 344 EDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHI 400 (405)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHH
T ss_pred CcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHH
Confidence 9987 455668888864 23779999 66778888999999999999999875
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=196.70 Aligned_cols=217 Identities=12% Similarity=0.069 Sum_probs=138.1
Q ss_pred CeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-CCCce
Q 018947 43 PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-GLGAV 121 (348)
Q Consensus 43 p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-~~~~v 121 (348)
|+|||+||++++...|.. . ...+.+||+|+++|+||||.|... ...++++++++++.++++.+ +.+++
T Consensus 52 ~~lvllHG~~~~~~~~~~------l-~~~L~~~~~v~~~D~~G~G~S~~~----~~~~~~~~~a~~~~~~l~~~~~~~~~ 120 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSAFRG------W-QERLGDEVAVVPVQLPGRGLRLRE----RPYDTMEPLAEAVADALEEHRLTHDY 120 (280)
T ss_dssp EEEEEECCTTCCGGGGTT------H-HHHHCTTEEEEECCCTTSGGGTTS----CCCCSHHHHHHHHHHHHHHTTCSSSE
T ss_pred ceEEEECCCCCChHHHHH------H-HHhcCCCceEEEEeCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHhCCCCCE
Confidence 789999999988866532 2 355566999999999999998643 34689999999999999999 77899
Q ss_pred eEEEeChhHHHHHHHHHhCCCCcc----eEEEecCCCCCCCh---HHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccc
Q 018947 122 MCMGVTAGAYILTLFAMKYRHRVL----GLILVSPLCKAPSW---TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEV 194 (348)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~----~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (348)
+|+||||||.+|+.+|.++|+++. .++++++....... ........+. ..+..+.....
T Consensus 121 ~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 186 (280)
T 3qmv_A 121 ALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALR--------------EVIRDLGGLDD 186 (280)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHH--------------HHHHHHTCCC-
T ss_pred EEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHH--------------HHHHHhCCCCh
Confidence 999999999999999999998877 88887754431110 0000000000 00111100000
Q ss_pred cCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcE
Q 018947 195 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSA 272 (348)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~ 272 (348)
.. .......+.+ ...+...+....... ...+..+++|+++|+|++|.+++ ....+.+.+++ ..+
T Consensus 187 ~~---~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~ 252 (280)
T 3qmv_A 187 AD---TLGAAYFDRR--------LPVLRADLRACERYD--WHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTG-SFL 252 (280)
T ss_dssp -----------CCTT--------HHHHHHHHHHHHTCC--CCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSS-CEE
T ss_pred hh---hcCHHHHHHH--------HHHHHHHHHHHHhcc--ccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCC-ceE
Confidence 00 0000000000 001111111111111 11256789999999999999883 33445666654 246
Q ss_pred EEEecCCCCCccc--cChhhhHHHHHHHH
Q 018947 273 LVEVQACGSMVTE--EQPHAMLIPMEYFL 299 (348)
Q Consensus 273 ~~~~~~~gH~~~~--e~p~~~~~~i~~fl 299 (348)
+++++ +||+.++ ++|+++++.|.+||
T Consensus 253 ~~~~~-ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 253 RRHLP-GNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp EEEEE-EETTGGGSSHHHHHHHHHHHTTC
T ss_pred EEEec-CCCeEEcCchhHHHHHHHHHhhC
Confidence 66676 6999999 89999999998875
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-25 Score=185.79 Aligned_cols=248 Identities=12% Similarity=0.060 Sum_probs=151.0
Q ss_pred ecCCceeEEEEccC---CCCCeEEEeCCCC---CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 26 KTSHGSLSVTIYGD---QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 26 ~~~~~~l~~~~~g~---~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
..+|.++++..+.+ +.+|+|||+||++ ++...|. ......+.++|+|+++|+||+|.+. ..
T Consensus 10 ~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~------~~~~~~l~~~~~v~~~d~~~~~~~~-------~~ 76 (275)
T 3h04_A 10 TKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLS------PQYIDILTEHYDLIQLSYRLLPEVS-------LD 76 (275)
T ss_dssp CTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSC------HHHHHHHTTTEEEEEECCCCTTTSC-------HH
T ss_pred cCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhH------HHHHHHHHhCceEEeeccccCCccc-------cc
Confidence 34677898887753 3568999999988 4433222 1224555556999999999998653 12
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccch
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (348)
...+++.+.+..+.+.++.++++++||||||.+++.+|.+ ++|+++|++++................... .....
T Consensus 77 ~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~- 151 (275)
T 3h04_A 77 CIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKI--AQSIN- 151 (275)
T ss_dssp HHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHH--HTTSC-
T ss_pred hhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhcc--cccch-
Confidence 4566666677777777788899999999999999999998 889999999998875432111100000000 00010
Q ss_pred hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHH----HcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA----INGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
......+.......... ............. ...+...+.. ..........+.+++ |+|+++|++|.+
T Consensus 152 ---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~ 222 (275)
T 3h04_A 152 ---ETMIAQLTSPTPVVQDQ--IAQRFLIYVYARG---TGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYD 222 (275)
T ss_dssp ---HHHHHTTSCSSCCSSCS--SGGGHHHHHHHHH---HTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSS
T ss_pred ---HHHHhcccCCCCcCCCc--cccchhhhhhhhh---cCchHHhhccccccccccccccchhccCC-CEEEEecCCCCC
Confidence 11122221111111000 0000000000000 0001111100 000011123346677 999999999999
Q ss_pred C--chHHHHHHhhccCCcEEEEecCCCCCccccCh---hhhHHHHHHHHhhc
Q 018947 256 H--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQP---HAMLIPMEYFLMGY 302 (348)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~~ 302 (348)
+ .....+.+.+++ .++++++++||..+.+.+ +++.+.+.+||++.
T Consensus 223 ~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~ 272 (275)
T 3h04_A 223 VPVEESEHIMNHVPH--STFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAI 272 (275)
T ss_dssp SCTHHHHHHHTTCSS--EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHhcCC--ceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHH
Confidence 8 456678888887 889999999999999988 68999999999874
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.93 E-value=8.3e-25 Score=180.58 Aligned_cols=216 Identities=13% Similarity=0.026 Sum_probs=151.7
Q ss_pred cceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC-C--
Q 018947 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE-P-- 98 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~-~-- 98 (348)
..++..++..+.++.... .+|+|||+||++++...|.... ..+..+||.|+++|+||+|.|........ .
T Consensus 5 ~~~~~~~g~~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~------~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~ 77 (238)
T 1ufo_A 5 TERLTLAGLSVLARIPEA-PKALLLALHGLQGSKEHILALL------PGYAERGFLLLAFDAPRHGEREGPPPSSKSPRY 77 (238)
T ss_dssp EEEEEETTEEEEEEEESS-CCEEEEEECCTTCCHHHHHHTS------TTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTH
T ss_pred ecccccCCEEEEEEecCC-CccEEEEECCCcccchHHHHHH------HHHHhCCCEEEEecCCCCccCCCCCCcccccch
Confidence 345566777765544332 7889999999999887653222 45556799999999999999875422110 0
Q ss_pred ----CCCHHHHHHHHHHHHHHc---CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 99 ----VLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 99 ----~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
..++++.++|+.++++.+ +.++++++|||+||.+++.+|.++|+.+.+++++++..........
T Consensus 78 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~--------- 148 (238)
T 1ufo_A 78 VEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQ--------- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTC---------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhhh---------
Confidence 013677788888777664 4589999999999999999999999999999998876543211000
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccC-CccEEEEec
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIFVG 250 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~g 250 (348)
+ .. .++ . ..+.. .+....+.++ ++|+++++|
T Consensus 149 ------------------~---~~------~~~-~----------------~~~~~----~~~~~~~~~~~~~P~l~i~g 180 (238)
T 1ufo_A 149 ------------------V---VE------DPG-V----------------LALYQ----APPATRGEAYGGVPLLHLHG 180 (238)
T ss_dssp ------------------C---CC------CHH-H----------------HHHHH----SCGGGCGGGGTTCCEEEEEE
T ss_pred ------------------c---cC------Ccc-c----------------chhhc----CChhhhhhhccCCcEEEEEC
Confidence 0 00 111 0 00010 2334446677 899999999
Q ss_pred CCCCCC--chHHHHHHhhc-cC---CcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 251 ESSPFH--SEAVHMTSKID-RR---YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~-~~---~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++|.++ .....+.+.++ .. ..++++++++||..+.+.++++.+.|.+|+++
T Consensus 181 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 181 SRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp TTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 999998 45566888887 32 38999999999999999888888888888764
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.5e-26 Score=184.53 Aligned_cols=203 Identities=12% Similarity=0.046 Sum_probs=151.3
Q ss_pred CCCccceeecCCceeEEEEccCC-CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~~-~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
+..++..+..++.++.+..+.+. ..|+||++||++++...|.. ......+...||.|+++|+||+|.|.......
T Consensus 10 ~~~~~~~~~~~g~~l~~~~~~p~~~~p~vv~~hG~~~~~~~~~~----~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~ 85 (223)
T 2o2g_A 10 PQEYAVSVSVGEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRN----RYVAEVLQQAGLATLLIDLLTQEEEEIDLRTR 85 (223)
T ss_dssp CCEEEEEEEETTEEEEEEEECCTTCCEEEEEECCTTCCTTCHHH----HHHHHHHHHHTCEEEEECSSCHHHHHHHHHHC
T ss_pred ceeeEEEEecCCeEEEEEEecCCCCceEEEEecCCCCCCCccch----HHHHHHHHHCCCEEEEEcCCCcCCCCccchhh
Confidence 34455666778889988877543 57899999999988765421 12234555679999999999999875331111
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCC------ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHFGLG------AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (348)
...++++++++|+.++++.+... +++++|||+||.+++.++.++|++++++|++++....
T Consensus 86 ~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~-------------- 151 (223)
T 2o2g_A 86 HLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL-------------- 151 (223)
T ss_dssp SSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGG--------------
T ss_pred cccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCc--------------
Confidence 22378999999999998876543 8999999999999999999999999999999874210
Q ss_pred HHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEec
Q 018947 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 250 (348)
....+.++++|+++++|
T Consensus 152 ---------------------------------------------------------------~~~~~~~~~~P~l~i~g 168 (223)
T 2o2g_A 152 ---------------------------------------------------------------APSALPHVKAPTLLIVG 168 (223)
T ss_dssp ---------------------------------------------------------------CTTTGGGCCSCEEEEEE
T ss_pred ---------------------------------------------------------------CHHHHhcCCCCEEEEEc
Confidence 00224567899999999
Q ss_pred CCCCCCc-hHHHHHHhhccCCcEEEEecCCCCCccc-cChhhhHHHHHHHHhhc
Q 018947 251 ESSPFHS-EAVHMTSKIDRRYSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 251 ~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 302 (348)
++|.+++ ...+..+... ...++++++++||.... +.++++.+.+.+||++.
T Consensus 169 ~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 221 (223)
T 2o2g_A 169 GYDLPVIAMNEDALEQLQ-TSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHY 221 (223)
T ss_dssp TTCHHHHHHHHHHHHHCC-SSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHhhC-CCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHh
Confidence 9999873 2223333332 23899999999999766 56799999999999875
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-25 Score=174.17 Aligned_cols=171 Identities=11% Similarity=0.062 Sum_probs=135.0
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCe---EEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF---CIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~---~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 117 (348)
++|+|||+||++++...|. .....+...|| +|+++|+||+|.|. ..+.+++++++.+++++++
T Consensus 2 ~~~~vv~~HG~~~~~~~~~------~~~~~l~~~G~~~~~v~~~d~~g~g~s~--------~~~~~~~~~~~~~~~~~~~ 67 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFA------GIKSYLVSQGWSRDKLYAVDFWDKTGTN--------YNNGPVLSRFVQKVLDETG 67 (181)
T ss_dssp CCCCEEEECCTTCCGGGGH------HHHHHHHHTTCCGGGEEECCCSCTTCCH--------HHHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEECCcCCCHhHHH------HHHHHHHHcCCCCccEEEEecCCCCCch--------hhhHHHHHHHHHHHHHHcC
Confidence 5688999999999876653 23345667787 79999999999874 2578899999999999999
Q ss_pred CCceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccccc
Q 018947 118 LGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (348)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
.++++++||||||.+++.++.++ |++|+++|++++....... ...
T Consensus 68 ~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~---------------------------------~~~ 114 (181)
T 1isp_A 68 AKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG---------------------------------KAL 114 (181)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS---------------------------------BCC
T ss_pred CCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc---------------------------------ccC
Confidence 99999999999999999999998 8999999999986432110 000
Q ss_pred CCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEE
Q 018947 196 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVE 275 (348)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 275 (348)
.. .+ ...++|+++++|++|.+++... ..+++ .++++
T Consensus 115 ------~~----------------------------~~-----~~~~~p~l~i~G~~D~~v~~~~---~~~~~--~~~~~ 150 (181)
T 1isp_A 115 ------PG----------------------------TD-----PNQKILYTSIYSSADMIVMNYL---SRLDG--ARNVQ 150 (181)
T ss_dssp ------CC----------------------------SC-----TTCCCEEEEEEETTCSSSCHHH---HCCBT--SEEEE
T ss_pred ------CC----------------------------CC-----CccCCcEEEEecCCCccccccc---ccCCC--Cccee
Confidence 00 00 1135799999999999985442 23555 89999
Q ss_pred ecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 276 VQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 276 ~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
++++||+.+.++| ++.+.|.+||++.+
T Consensus 151 ~~~~gH~~~~~~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 151 IHGVGHIGLLYSS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp ESSCCTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred eccCchHhhccCH-HHHHHHHHHHhccC
Confidence 9999999999887 79999999998764
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=174.50 Aligned_cols=176 Identities=15% Similarity=0.126 Sum_probs=128.4
Q ss_pred CCCeEEEeCCCCCCh---hhhccccccchhhhhhccC--CeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNY---MSCFQGLFFCPEACSLLLH--NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~---~~~~~~~~~~~~~~~~~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
.+|+|||+||++++. ..|.. .....+.+ ||+|+++|+||++. . ++.+++..+++.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~------~~~~~l~~~~g~~vi~~d~~g~~~-----------~---~~~~~~~~~~~~ 62 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYG------WVKKELEKIPGFQCLAKNMPDPIT-----------A---RESIWLPFMETE 62 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHH------HHHHHHTTSTTCCEEECCCSSTTT-----------C---CHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCCcccchHHH------HHHHHHhhccCceEEEeeCCCCCc-----------c---cHHHHHHHHHHH
Confidence 568999999999884 33322 11344444 99999999999631 1 246778888888
Q ss_pred cCC-CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccc
Q 018947 116 FGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEV 194 (348)
Q Consensus 116 l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (348)
++. ++++++||||||.+++.+|.++| |+++|++++......... .....++...
T Consensus 63 l~~~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~----------------------~~~~~~~~~~- 117 (194)
T 2qs9_A 63 LHCDEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN----------------------ERASGYFTRP- 117 (194)
T ss_dssp SCCCTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH----------------------HHHTSTTSSC-
T ss_pred hCcCCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh----------------------hHHHhhhccc-
Confidence 988 89999999999999999999999 999999998765321100 0001111100
Q ss_pred cCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcE
Q 018947 195 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSA 272 (348)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~ 272 (348)
. ..+.+..+.+|+++++|++|.+++ ....+.+.+ + ++
T Consensus 118 -------~-------------------------------~~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~--~~ 156 (194)
T 2qs9_A 118 -------W-------------------------------QWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-E--TK 156 (194)
T ss_dssp -------C-------------------------------CHHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T--CE
T ss_pred -------c-------------------------------cHHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C--Ce
Confidence 0 011123356799999999999983 455677777 5 89
Q ss_pred EEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 273 LVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 273 ~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
+++++++||+.+.++|+.+++.+ +||++..
T Consensus 157 ~~~~~~~gH~~~~~~p~~~~~~~-~fl~~~~ 186 (194)
T 2qs9_A 157 LHKFTDCGHFQNTEFHELITVVK-SLLKVPA 186 (194)
T ss_dssp EEEESSCTTSCSSCCHHHHHHHH-HHHTCCC
T ss_pred EEEeCCCCCccchhCHHHHHHHH-HHHHhhh
Confidence 99999999999999999998876 9998863
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-24 Score=188.88 Aligned_cols=229 Identities=13% Similarity=0.071 Sum_probs=160.0
Q ss_pred CCCccceeecCCceeEEEEccC---CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
...++..+..+|.++.+..+.+ ...|+||++||++++...++. ....++.+||.|+++|+||+|.|..
T Consensus 125 ~~~~~v~~~~dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~~------~~~~l~~~G~~v~~~d~rG~G~s~~--- 195 (386)
T 2jbw_A 125 PPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQ------MENLVLDRGMATATFDGPGQGEMFE--- 195 (386)
T ss_dssp SCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHH------HHHHHHHTTCEEEEECCTTSGGGTT---
T ss_pred CCeEEEEEEeCCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHHHHH------HHHHHHhCCCEEEEECCCCCCCCCC---
Confidence 4456666777888898877643 345789999999887765432 2356678899999999999999832
Q ss_pred CCCCCCCHHHHHHHHHHHHHH---cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNH---FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
......++++.+.++.+++.. ++.++++++|||+||.+++.+|.+ |++|+++|++ +.........
T Consensus 196 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~---------- 263 (386)
T 2jbw_A 196 YKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD---------- 263 (386)
T ss_dssp TCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG----------
T ss_pred CCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH----------
Confidence 223457888889999999987 566899999999999999999999 8999999999 7665432211
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHH-HHHHHHcCCccHHhhhccCCccEEEEec
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVW-HFLEAINGRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 250 (348)
...... .......++.. .. .... ..+.. .+....+.++++|+|+++|
T Consensus 264 ----~~~~~~-~~~~~~~~g~~--------~~---------------~~~~~~~~~~----~~~~~~~~~i~~P~Lii~G 311 (386)
T 2jbw_A 264 ----LETPLT-KESWKYVSKVD--------TL---------------EEARLHVHAA----LETRDVLSQIACPTYILHG 311 (386)
T ss_dssp ----GSCHHH-HHHHHHHTTCS--------SH---------------HHHHHHHHHH----TCCTTTGGGCCSCEEEEEE
T ss_pred ----hccHHH-HHHHHHHhCCC--------CH---------------HHHHHHHHHh----CChhhhhcccCCCEEEEEC
Confidence 000000 00011111110 00 0011 11111 1233456788999999999
Q ss_pred CCCCCC--chHHHHHHhh-ccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 251 ESSPFH--SEAVHMTSKI-DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 251 ~~D~~~--~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++|. + .....+.+.+ +. ..++++++++||.. .++++++.+.|.+||++.
T Consensus 312 ~~D~-v~~~~~~~l~~~l~~~-~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 363 (386)
T 2jbw_A 312 VHDE-VPLSFVDTVLELVPAE-HLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDV 363 (386)
T ss_dssp TTSS-SCTHHHHHHHHHSCGG-GEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHH
T ss_pred CCCC-CCHHHHHHHHHHhcCC-CcEEEEeCCCCcCC-ccchHHHHHHHHHHHHHh
Confidence 9999 7 4566788888 62 38999999999964 688999999999999876
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=187.03 Aligned_cols=192 Identities=11% Similarity=0.068 Sum_probs=139.1
Q ss_pred EEEccCCCCCeEEEeCCCCCChhhhcccccc-chhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC-------C-------
Q 018947 34 VTIYGDQDKPALVTYPDLALNYMSCFQGLFF-CPEACSLLLHNFCIYHINPPGHEFGAAAISDDE-------P------- 98 (348)
Q Consensus 34 ~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~-~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~-------~------- 98 (348)
|...++..+++|||+||++.+...|....-. ...+..++.+||.|+++|+||||.|........ .
T Consensus 54 ~~~p~~~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~ 133 (328)
T 1qlw_A 54 YQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDL 133 (328)
T ss_dssp EEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCC
T ss_pred EEccCCCCCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccce
Confidence 3333444668899999999888765421000 012346667899999999999999875411000 0
Q ss_pred ------------CCC----------------HHH------------------HHHHHHHHHHHcCCCceeEEEeChhHHH
Q 018947 99 ------------VLS----------------VDD------------------LADQIAEVLNHFGLGAVMCMGVTAGAYI 132 (348)
Q Consensus 99 ------------~~~----------------~~~------------------~~~dl~~~l~~l~~~~v~lvGhS~Gg~i 132 (348)
.+. +++ +++++.++++.++ +++++|||+||.+
T Consensus 134 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~lvGhS~GG~~ 211 (328)
T 1qlw_A 134 FAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVLLSHSQSGIY 211 (328)
T ss_dssp BCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEEEEEGGGTTH
T ss_pred eccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceEEEECcccHH
Confidence 000 444 7888888888876 8999999999999
Q ss_pred HHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHH
Q 018947 133 LTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRL 212 (348)
Q Consensus 133 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (348)
++.+|.++|++|+++|+++|...
T Consensus 212 a~~~a~~~p~~v~~~v~~~p~~~--------------------------------------------------------- 234 (328)
T 1qlw_A 212 PFQTAAMNPKGITAIVSVEPGEC--------------------------------------------------------- 234 (328)
T ss_dssp HHHHHHHCCTTEEEEEEESCSCC---------------------------------------------------------
T ss_pred HHHHHHhChhheeEEEEeCCCCC---------------------------------------------------------
Confidence 99999999999999999997540
Q ss_pred HhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc-------hHHHHHHhhcc--CCcEEEEecCCC---
Q 018947 213 LDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS-------EAVHMTSKIDR--RYSALVEVQACG--- 280 (348)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~-------~~~~~~~~~~~--~~~~~~~~~~~g--- 280 (348)
.+.......+++|+|+++|++|.+++ ..+.+.+.++. .++++++++++|
T Consensus 235 -------------------~~~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G 295 (328)
T 1qlw_A 235 -------------------PKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHG 295 (328)
T ss_dssp -------------------CCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCC
T ss_pred -------------------CCHHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCC
Confidence 00001112356899999999999874 23346677762 138999999666
Q ss_pred --CCccccC-hhhhHHHHHHHHhhcc
Q 018947 281 --SMVTEEQ-PHAMLIPMEYFLMGYG 303 (348)
Q Consensus 281 --H~~~~e~-p~~~~~~i~~fl~~~~ 303 (348)
|+++.+. ++++++.|.+||++..
T Consensus 296 ~~H~~~~~~~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 296 NSHMMMQDRNNLQVADLILDWIGRNT 321 (328)
T ss_dssp CCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred CcccchhccCHHHHHHHHHHHHHhcc
Confidence 9999988 9999999999999874
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-25 Score=183.46 Aligned_cols=221 Identities=14% Similarity=0.127 Sum_probs=130.2
Q ss_pred EccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 36 IYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 36 ~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
.+..+.+++|||+||++++...|... ...+.++|+|+++|+||||.|..+ ..+++.+.+.++++.
T Consensus 7 ~~~~~~~~~lv~lhg~g~~~~~~~~~-------~~~L~~~~~vi~~Dl~GhG~S~~~--------~~~~~~~~~~~~~~~ 71 (242)
T 2k2q_B 7 SFDASEKTQLICFPFAGGYSASFRPL-------HAFLQGECEMLAAEPPGHGTNQTS--------AIEDLEELTDLYKQE 71 (242)
T ss_dssp CCSTTCCCEEESSCCCCHHHHHHHHH-------HHHHCCSCCCEEEECCSSCCSCCC--------TTTHHHHHHHHTTTT
T ss_pred CCCCCCCceEEEECCCCCCHHHHHHH-------HHhCCCCeEEEEEeCCCCCCCCCC--------CcCCHHHHHHHHHHH
Confidence 34445778999999999987665322 355677899999999999998632 234555555556666
Q ss_pred cCC---CceeEEEeChhHHHHHHHHHh------CCCCcceEEEecCCC-CCCChHHHHHHHHHHHHHHhhccchhHHHHH
Q 018947 116 FGL---GAVMCMGVTAGAYILTLFAMK------YRHRVLGLILVSPLC-KAPSWTEWLYNKVMSNLLYYYGMCGVVKELL 185 (348)
Q Consensus 116 l~~---~~v~lvGhS~Gg~ia~~~a~~------~p~~v~~lvl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (348)
++. ++++|+||||||.+|+.+|.+ +|++ +++.+... ....... .... ....
T Consensus 72 l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~~-------------~~~~---~~~~ 132 (242)
T 2k2q_B 72 LNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQRKKV-------------SHLP---DDQF 132 (242)
T ss_dssp CCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCCC-------------SSCT---THHH
T ss_pred HHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCcccc-------------cCCC---HHHH
Confidence 665 689999999999999999987 5554 34433211 1100000 0000 0011
Q ss_pred HHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc-hHHHHHH
Q 018947 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS-EAVHMTS 264 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~-~~~~~~~ 264 (348)
+..+...... ....... ..........+...+..... .+.. .+.++++|+++|+|++|.+++ ....+.+
T Consensus 133 ~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~-~l~~i~~P~lvi~G~~D~~~~~~~~~~~~ 202 (242)
T 2k2q_B 133 LDHIIQLGGM------PAELVEN--KEVMSFFLPSFRSDYRALEQ-FELY-DLAQIQSPVHVFNGLDDKKCIRDAEGWKK 202 (242)
T ss_dssp HHTTCCTTCC------CCTTTHH--HHTTTTCCSCHHHHHHHHTC-CCCS-CCTTCCCSEEEEEECSSCCHHHHHHHHHT
T ss_pred HHHHHHhCCC------ChHHhcC--HHHHHHHHHHHHHHHHHHHh-cccC-CCCccCCCEEEEeeCCCCcCHHHHHHHHH
Confidence 1111100000 0000000 00000001112222222212 1111 267899999999999999863 3334445
Q ss_pred hhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 265 KIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 265 ~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
..++ .++++++ +||++++|+|+++++.|.+||++..
T Consensus 203 ~~~~--~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 238 (242)
T 2k2q_B 203 WAKD--ITFHQFD-GGHMFLLSQTEEVAERIFAILNQHP 238 (242)
T ss_dssp TCCC--SEEEEEE-CCCSHHHHHCHHHHHHHHHHHHTTT
T ss_pred HhcC--CeEEEEe-CCceeEcCCHHHHHHHHHHHhhccC
Confidence 5554 6788887 6999999999999999999998764
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-24 Score=180.27 Aligned_cols=184 Identities=11% Similarity=0.052 Sum_probs=135.8
Q ss_pred CceeEEEEcc-CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018947 29 HGSLSVTIYG-DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 29 ~~~l~~~~~g-~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
++.++|...+ +..+|+|||+||++++...|. .....+.+.||.|+++|+||+|.+... ....+.+..+
T Consensus 40 ~~~l~~p~~~~~~~~p~vv~~HG~~~~~~~~~------~~~~~l~~~G~~v~~~d~~g~g~~~~~-----~~~d~~~~~~ 108 (262)
T 1jfr_A 40 GGTIYYPTSTADGTFGAVVISPGFTAYQSSIA------WLGPRLASQGFVVFTIDTNTTLDQPDS-----RGRQLLSALD 108 (262)
T ss_dssp CEEEEEESCCTTCCEEEEEEECCTTCCGGGTT------THHHHHHTTTCEEEEECCSSTTCCHHH-----HHHHHHHHHH
T ss_pred ceeEEecCCCCCCCCCEEEEeCCcCCCchhHH------HHHHHHHhCCCEEEEeCCCCCCCCCch-----hHHHHHHHHH
Confidence 4567766553 356689999999998876543 223455678999999999999875311 0011122222
Q ss_pred HHHH---HHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHH
Q 018947 108 QIAE---VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKEL 184 (348)
Q Consensus 108 dl~~---~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (348)
.+.+ ++..++.++++++|||+||.+++.+|.++|+ |+++|++++...
T Consensus 109 ~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~----------------------------- 158 (262)
T 1jfr_A 109 YLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT----------------------------- 158 (262)
T ss_dssp HHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-----------------------------
T ss_pred HHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-----------------------------
Confidence 2222 1234556789999999999999999999998 999999887421
Q ss_pred HHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--ch-HHH
Q 018947 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE-AVH 261 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~-~~~ 261 (348)
...+.++++|+++++|++|.++ .. ...
T Consensus 159 --------------------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 188 (262)
T 1jfr_A 159 --------------------------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKP 188 (262)
T ss_dssp --------------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHH
T ss_pred --------------------------------------------------cccccccCCCEEEEecCccccCCchhhHHH
Confidence 1123467899999999999988 34 677
Q ss_pred HHHhhcc-CCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 262 MTSKIDR-RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 262 ~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
+.+.+++ ...++++++++||..+.++++++.+.|.+||++.-
T Consensus 189 ~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l 231 (262)
T 1jfr_A 189 FYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFI 231 (262)
T ss_dssp HHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHHHHHHh
Confidence 8888865 24689999999999999999999999999998763
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-23 Score=182.40 Aligned_cols=231 Identities=11% Similarity=0.099 Sum_probs=150.6
Q ss_pred eeec-CCceeEEEEcc---CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC----
Q 018947 24 LIKT-SHGSLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD---- 95 (348)
Q Consensus 24 ~v~~-~~~~l~~~~~g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~---- 95 (348)
.+.. +|.++++..+. .+..|+||++||++++...|... ..+++.||.|+++|+||+|.|..+...
T Consensus 86 ~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~~~~~-------~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~ 158 (346)
T 3fcy_A 86 YFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSGDWNDK-------LNYVAAGFTVVAMDVRGQGGQSQDVGGVTGN 158 (346)
T ss_dssp EEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSCCSGGG-------HHHHTTTCEEEEECCTTSSSSCCCCCCCSSC
T ss_pred EEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCCChhhh-------hHHHhCCcEEEEEcCCCCCCCCCCCcccCCC
Confidence 3443 56678877663 24568999999999887654322 366789999999999999988754211
Q ss_pred ------------CCCCCCHHHHHHHHHHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 96 ------------DEPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 96 ------------~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
....+.+....+|+.++++.+ +.++++++|||+||.+++.+|..+|+ |+++|+++|....
T Consensus 159 ~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~- 236 (346)
T 3fcy_A 159 TLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSD- 236 (346)
T ss_dssp CSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCC-
T ss_pred CcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccC-
Confidence 223344566667776666544 33689999999999999999999998 9999999886542
Q ss_pred ChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhh
Q 018947 158 SWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEG 237 (348)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (348)
.... +. ....... ...+..++.... . ...........+ ...+....
T Consensus 237 -~~~~---------~~-~~~~~~~-~~~~~~~~~~~~--------------------~-~~~~~~~~~~~~-~~~d~~~~ 282 (346)
T 3fcy_A 237 -YKRV---------WD-LDLAKNA-YQEITDYFRLFD--------------------P-RHERENEVFTKL-GYIDVKNL 282 (346)
T ss_dssp -HHHH---------HH-TTCCCGG-GHHHHHHHHHHC--------------------T-TCTTHHHHHHHH-GGGCHHHH
T ss_pred -HHHH---------hh-ccccccc-hHHHHHHHHhcC--------------------C-CcchHHHHHHHh-CcccHHHH
Confidence 1000 00 0000000 000111111000 0 000011111111 12456667
Q ss_pred hccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 238 LRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 238 l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+.++++|+|+++|++|.+++ ....+.+.++. .+++++++++||..+ +++.+.+.+||+++
T Consensus 283 ~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 283 AKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS-KKDIKVYPDYGHEPM----RGFGDLAMQFMLEL 344 (346)
T ss_dssp GGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-SEEEEEETTCCSSCC----TTHHHHHHHHHHTT
T ss_pred HHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-CcEEEEeCCCCCcCH----HHHHHHHHHHHHHh
Confidence 78899999999999999983 44457777764 489999999999887 67889999999875
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=169.82 Aligned_cols=172 Identities=12% Similarity=0.047 Sum_probs=134.3
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-C
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~ 118 (348)
..+|+|||+||++++...|.. ......+.+.||.|+++|+||+|.|... ....++.+.++++.+.++... .
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~----~~~~~~l~~~g~~v~~~d~~g~g~s~~~----~~~~~~~~~~~~~~~~~~~~~~~ 73 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKV----TALAEVAERLGWTHERPDFTDLDARRDL----GQLGDVRGRLQRLLEIARAATEK 73 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHH----HHHHHHHHHTTCEEECCCCHHHHTCGGG----CTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCccHHHH----HHHHHHHHHCCCEEEEeCCCCCCCCCCC----CCCCCHHHHHHHHHHHHHhcCCC
Confidence 356889999999988654421 1222455567999999999999998633 234678888888888877664 5
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNA 198 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (348)
++++++|||+||.+++.++.++| ++++|++++.......
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~--------------------------------------- 112 (176)
T 2qjw_A 74 GPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL--------------------------------------- 112 (176)
T ss_dssp SCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB---------------------------------------
T ss_pred CCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc---------------------------------------
Confidence 79999999999999999999998 9999999987653210
Q ss_pred CCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEe
Q 018947 199 QVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEV 276 (348)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~ 276 (348)
.. +..+++|+++++|++|.+++ ....+.+.+ + .+++++
T Consensus 113 ---~~----------------------------------~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~--~~~~~~ 152 (176)
T 2qjw_A 113 ---PA----------------------------------LDAAAVPISIVHAWHDELIPAADVIAWAQAR-S--ARLLLV 152 (176)
T ss_dssp ---CC----------------------------------CCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-T--CEEEEE
T ss_pred ---Cc----------------------------------ccccCCCEEEEEcCCCCccCHHHHHHHHHhC-C--ceEEEe
Confidence 00 34678999999999999983 455566666 3 888999
Q ss_pred cCCCCCccccChhhhHHHHHHHHhhc
Q 018947 277 QACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 277 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++||... ++++++.+.|.+||+++
T Consensus 153 -~~~H~~~-~~~~~~~~~i~~fl~~l 176 (176)
T 2qjw_A 153 -DDGHRLG-AHVQAASRAFAELLQSL 176 (176)
T ss_dssp -SSCTTCT-TCHHHHHHHHHHHHHTC
T ss_pred -CCCcccc-ccHHHHHHHHHHHHHhC
Confidence 8999974 89999999999999863
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=178.39 Aligned_cols=198 Identities=14% Similarity=0.171 Sum_probs=138.5
Q ss_pred CCCCccceeecCCceeEEEEccC-CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEe--CCCCCCCCCCCC
Q 018947 17 PPSGKDNLIKTSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI--NPPGHEFGAAAI 93 (348)
Q Consensus 17 ~~~~~~~~v~~~~~~l~~~~~g~-~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~--D~~G~G~S~~~~ 93 (348)
.-..++.++..++.+++|...|+ +.+|+||++||++++...|.. . ...+..||.|+++ |+||+|.|....
T Consensus 12 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~------~-~~~l~~g~~v~~~~~d~~g~g~s~~~~ 84 (226)
T 2h1i_A 12 DLGTENLYFQSNAMMKHVFQKGKDTSKPVLLLLHGTGGNELDLLP------L-AEIVDSEASVLSVRGNVLENGMPRFFR 84 (226)
T ss_dssp ---CCCHHHHHHSSSCEEEECCSCTTSCEEEEECCTTCCTTTTHH------H-HHHHHTTSCEEEECCSEEETTEEESSC
T ss_pred cccceeeeecCCCceeEEecCCCCCCCcEEEEEecCCCChhHHHH------H-HHHhccCceEEEecCcccCCcchhhcc
Confidence 33456667778889999999886 578999999999988765422 2 2444559999999 999999775321
Q ss_pred CCCCCCCCHHHHHHHHHHH---H----HHc--CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEV---L----NHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~---l----~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (348)
......++..++.+++.++ + +.. +.++++++|||+||.+++.+|.++|++++++|++++......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------ 158 (226)
T 2h1i_A 85 RLAEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------ 158 (226)
T ss_dssp EEETTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS------
T ss_pred ccCccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc------
Confidence 1112234556555544333 3 334 447999999999999999999999999999999998754321
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCcc
Q 018947 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (348)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 244 (348)
. .....+++|
T Consensus 159 ----------------------------~------------------------------------------~~~~~~~~p 168 (226)
T 2h1i_A 159 ----------------------------M------------------------------------------QLANLAGKS 168 (226)
T ss_dssp ----------------------------C------------------------------------------CCCCCTTCE
T ss_pred ----------------------------c------------------------------------------ccccccCCc
Confidence 0 001234789
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhccCCcEEE-EecCCCCCccccChhhhHHHHHHHHhh
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDRRYSALV-EVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~-~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+++++|++|.+++ ....+.+.+++.+.... +++++||..+.+. .+.+.+||++
T Consensus 169 ~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~l~~ 224 (226)
T 2h1i_A 169 VFIAAGTNDPICSSAESEELKVLLENANANVTMHWENRGHQLTMGE----VEKAKEWYDK 224 (226)
T ss_dssp EEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESSTTSCCHHH----HHHHHHHHHH
T ss_pred EEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEEEeCCCCCCCCHHH----HHHHHHHHHH
Confidence 9999999999983 45667787875333333 8999999986544 4555566654
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-24 Score=178.76 Aligned_cols=216 Identities=9% Similarity=0.026 Sum_probs=141.1
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-C
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~ 118 (348)
..+++|||+||++++...|... .. +..+|+|+++|+||+|.+.. ..++++++++++.++++.+. .
T Consensus 19 ~~~~~lv~lhg~~~~~~~~~~~-------~~-l~~~~~v~~~d~~G~~~~~~------~~~~~~~~~~~~~~~i~~~~~~ 84 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFSYASL-------PR-LKSDTAVVGLNCPYARDPEN------MNCTHGAMIESFCNEIRRRQPR 84 (265)
T ss_dssp TSSEEEEEECCTTCCGGGGTTS-------CC-CSSSEEEEEEECTTTTCGGG------CCCCHHHHHHHHHHHHHHHCSS
T ss_pred CCCCEEEEECCCCCCHHHHHHH-------Hh-cCCCCEEEEEECCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCC
Confidence 4668999999999988765432 25 68899999999999976653 24799999999999999885 4
Q ss_pred CceeEEEeChhHHHHHHHHH---hCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccc-
Q 018947 119 GAVMCMGVTAGAYILTLFAM---KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEV- 194 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 194 (348)
++++++||||||.+++++|. .++++|+++|++++.......... ..... ++........
T Consensus 85 ~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~---~~~~~--------------~~~~~~~~~~~ 147 (265)
T 3ils_A 85 GPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLP---RAFYE--------------HCNSIGLFATQ 147 (265)
T ss_dssp CCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCC---HHHHH--------------HHHHTTTTTTS
T ss_pred CCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccC---HHHHH--------------HHHHHHHhCCC
Confidence 68999999999999999998 778889999999876543211000 00000 0110000000
Q ss_pred ----cCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEE-EEecCC---CCCCc---------
Q 018947 195 ----RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL-IFVGES---SPFHS--------- 257 (348)
Q Consensus 195 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl-~i~g~~---D~~~~--------- 257 (348)
..............++. .+..... ... .....+++|++ +++|++ |..++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~-~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~ 213 (265)
T 3ils_A 148 PGASPDGSTEPPSYLIPHFTA------------VVDVMLD-YKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFM 213 (265)
T ss_dssp SSSCSSSCSCCCTTHHHHHHH------------HHHHTTT-CCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTT
T ss_pred ccccccCCHHHHHHHHHHHHH------------HHHHHHh-cCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchh
Confidence 00000001111121111 1111111 111 12347899988 999999 88651
Q ss_pred -------hHHHHHHhhccCCcEEEEecCCCCCcc--ccChhhhHHHHHHHHh
Q 018947 258 -------EAVHMTSKIDRRYSALVEVQACGSMVT--EEQPHAMLIPMEYFLM 300 (348)
Q Consensus 258 -------~~~~~~~~~~~~~~~~~~~~~~gH~~~--~e~p~~~~~~i~~fl~ 300 (348)
....+.+..+..+.++++++++||+.+ .|+|+++++.|.+||+
T Consensus 214 ~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 214 IQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVMA 265 (265)
T ss_dssp TSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHTC
T ss_pred hccccccCcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHhC
Confidence 112344545423589999999999999 8999999999999973
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-23 Score=168.01 Aligned_cols=196 Identities=13% Similarity=0.096 Sum_probs=138.9
Q ss_pred CCccceeecCCceeEEEEccC-----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 19 SGKDNLIKTSHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 19 ~~~~~~v~~~~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
..+...+.+.++++.+..+.+ ..+|+||++||++..+..... ..|......+.++||.|+++|+||+|.|....
T Consensus 9 ~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 87 (220)
T 2fuk_A 9 ESAALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHN-KVVTMAARALRELGITVVRFNFRSVGTSAGSF 87 (220)
T ss_dssp SCEEEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTC-HHHHHHHHHHHTTTCEEEEECCTTSTTCCSCC
T ss_pred cceEEEEeCCCCeEEEEEEeCCCCCccccCEEEEECCCCCcCCcccc-hHHHHHHHHHHHCCCeEEEEecCCCCCCCCCc
Confidence 445666777777887766532 236899999996532221111 11223335566779999999999999987542
Q ss_pred CCCCCCCCHHHHHHHHHHHH----HHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (348)
. .....++|+.+++ +..+.++++++|||+||.+++.++.++ +|+++|++++......
T Consensus 88 ~------~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~----------- 148 (220)
T 2fuk_A 88 D------HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD----------- 148 (220)
T ss_dssp C------TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-----------
T ss_pred c------cCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh-----------
Confidence 1 1234445555444 444556899999999999999999988 8999999998765422
Q ss_pred HHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEe
Q 018947 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 249 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~ 249 (348)
. . + + ...+|+++++
T Consensus 149 ------------------------~-----------------------------------~--~----~-~~~~p~l~i~ 162 (220)
T 2fuk_A 149 ------------------------F-----------------------------------S--D----V-QPPAQWLVIQ 162 (220)
T ss_dssp ------------------------C-----------------------------------T--T----C-CCCSSEEEEE
T ss_pred ------------------------h-----------------------------------h--h----c-ccCCcEEEEE
Confidence 0 0 0 0 1157899999
Q ss_pred cCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 250 GESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 250 g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|++|.++ .....+.+.+. +..++++++++||..+. +++++.+.+.+|+++.
T Consensus 163 g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~~ 215 (220)
T 2fuk_A 163 GDADEIVDPQAVYDWLETLE-QQPTLVRMPDTSHFFHR-KLIDLRGALQHGVRRW 215 (220)
T ss_dssp ETTCSSSCHHHHHHHHTTCS-SCCEEEEETTCCTTCTT-CHHHHHHHHHHHHGGG
T ss_pred CCCCcccCHHHHHHHHHHhC-cCCcEEEeCCCCceehh-hHHHHHHHHHHHHHHH
Confidence 9999998 34556777773 24899999999999887 5889999999999876
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-23 Score=177.69 Aligned_cols=214 Identities=15% Similarity=0.098 Sum_probs=141.6
Q ss_pred cCCCCCeEEEeCCC--CCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 38 GDQDKPALVTYPDL--ALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 38 g~~~~p~vvllHG~--~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
....+|+|||+||+ +++...|. .. ...+..+|+|+++|+||||.|..+ ..+++++++++.++++.
T Consensus 77 ~~~~~~~lv~lhG~~~~~~~~~~~------~~-~~~L~~~~~v~~~d~~G~G~~~~~------~~~~~~~~~~~~~~l~~ 143 (319)
T 3lcr_A 77 RGQLGPQLILVCPTVMTTGPQVYS------RL-AEELDAGRRVSALVPPGFHGGQAL------PATLTVLVRSLADVVQA 143 (319)
T ss_dssp SCCSSCEEEEECCSSTTCSGGGGH------HH-HHHHCTTSEEEEEECTTSSTTCCE------ESSHHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcCCCHHHHH------HH-HHHhCCCceEEEeeCCCCCCCCCC------CCCHHHHHHHHHHHHHH
Confidence 33578999999996 44443322 22 455588999999999999986532 35899999999998877
Q ss_pred c-CCCceeEEEeChhHHHHHHHHHhC---CCCcceEEEecCCCCCCC--hHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Q 018947 116 F-GLGAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAPS--WTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (348)
Q Consensus 116 l-~~~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (348)
+ +.++++|+||||||.+++.+|.++ |++|+++|++++...... .......... .......
T Consensus 144 ~~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~ 209 (319)
T 3lcr_A 144 EVADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSAL--------------NERFVEY 209 (319)
T ss_dssp HHTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHH--------------HHHHHHH
T ss_pred hcCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHH--------------HHHHhhh
Confidence 6 558999999999999999999988 889999999998776543 2211111110 0000000
Q ss_pred hcccccCCCCCCC--hHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC-chHHHHHHhh
Q 018947 190 FSKEVRGNAQVPE--SDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKI 266 (348)
Q Consensus 190 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~-~~~~~~~~~~ 266 (348)
...... . ...... +..++..+..+ ....+++|+++|+|++|... .....+.+.+
T Consensus 210 ~~~~~~------~~~~~~l~~------------~~~~~~~~~~~-----~~~~i~~PvLli~g~~~~~~~~~~~~~~~~~ 266 (319)
T 3lcr_A 210 LRLTGG------GNLSQRITA------------QVWCLELLRGW-----RPEGLTAPTLYVRPAQPLVEQEKPEWRGDVL 266 (319)
T ss_dssp HHHHCC------CCHHHHHHH------------HHHHHHHTTTC-----CCCCCSSCEEEEEESSCSSSCCCTHHHHHHH
T ss_pred hcccCC------CchhHHHHH------------HHHHHHHHhcC-----CCCCcCCCEEEEEeCCCCCCcccchhhhhcC
Confidence 000000 1 111111 11112222111 12578999999999986554 4455566666
Q ss_pred ccCCcEEEEecCCCCCcccc--ChhhhHHHHHHHHhhcc
Q 018947 267 DRRYSALVEVQACGSMVTEE--QPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 267 ~~~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~~~ 303 (348)
+. ..++++++ ++|+.+++ +|+++++.|.+||++..
T Consensus 267 ~~-~~~~~~~~-g~H~~~~~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 267 AA-MGQVVEAP-GDHFTIIEGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp HT-CSEEEEES-SCTTGGGSTTTHHHHHHHHHHHHHHHH
T ss_pred CC-CceEEEeC-CCcHHhhCcccHHHHHHHHHHHHHhcc
Confidence 64 36777776 68888886 99999999999999863
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-24 Score=170.31 Aligned_cols=178 Identities=14% Similarity=0.131 Sum_probs=131.5
Q ss_pred CCCeEEEeCCCCCChh-hhccccccchhhhh-hccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018947 41 DKPALVTYPDLALNYM-SCFQGLFFCPEACS-LLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~-~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~ 118 (348)
+.|+|||+||++++.. .|.. .+.. +.++||+|+++|+|. |. ..+++++++++.++++.+ .
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~------~~~~~l~~~g~~v~~~d~~~---~~--------~~~~~~~~~~~~~~~~~~-~ 64 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFP------WLKKRLLADGVQADILNMPN---PL--------QPRLEDWLDTLSLYQHTL-H 64 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHH------HHHHHHHHTTCEEEEECCSC---TT--------SCCHHHHHHHHHTTGGGC-C
T ss_pred CCCEEEEEcCCCCCcchhHHH------HHHHHHHhCCcEEEEecCCC---CC--------CCCHHHHHHHHHHHHHhc-c
Confidence 3466999999999876 4432 2233 447899999999992 32 127999999999999988 7
Q ss_pred CceeEEEeChhHHHHHHHHHhCCC--CcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRH--RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRG 196 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (348)
++++++||||||.+++.+|.++|+ +|+++|++++....... +.. +..++..
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~-----------------~~~------~~~~~~~---- 117 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPT-----------------LQM------LDEFTQG---- 117 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT-----------------CGG------GGGGTCS----
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCcccc-----------------chh------hhhhhhc----
Confidence 899999999999999999999999 99999999987653210 000 0000000
Q ss_pred CCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEE
Q 018947 197 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALV 274 (348)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~ 274 (348)
..+. ..+.++++|+++++|++|.+++ ....+.+.+ + .+++
T Consensus 118 ----------------------------------~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~--~~~~ 159 (192)
T 1uxo_A 118 ----------------------------------SFDH-QKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-D--AALY 159 (192)
T ss_dssp ----------------------------------CCCH-HHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-T--CEEE
T ss_pred ----------------------------------CCCH-HHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-C--ceEE
Confidence 0111 3345677899999999999983 455677777 5 8999
Q ss_pred EecCCCCCccccChhhh---HHHHHHHHhh
Q 018947 275 EVQACGSMVTEEQPHAM---LIPMEYFLMG 301 (348)
Q Consensus 275 ~~~~~gH~~~~e~p~~~---~~~i~~fl~~ 301 (348)
+++++||+.+.++++++ .+.|.+|+++
T Consensus 160 ~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 160 EVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp EETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred EeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 99999999999988665 6666666654
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=172.37 Aligned_cols=197 Identities=11% Similarity=0.036 Sum_probs=146.0
Q ss_pred cceeec-CCceeEEEEccCC--CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC--
Q 018947 22 DNLIKT-SHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD-- 96 (348)
Q Consensus 22 ~~~v~~-~~~~l~~~~~g~~--~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~-- 96 (348)
+..+.+ +|.++.+..+.+. ..|+||++||++++...+. ..+..+.+.||.|+++|+||+|.|.......
T Consensus 5 ~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~ 78 (236)
T 1zi8_A 5 GISIQSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNAFMR------ETVSWLVDQGYAAVCPDLYARQAPGTALDPQDE 78 (236)
T ss_dssp TCCEECTTSCEECEEEECCSSCSEEEEEEECCTTBSCHHHH------HHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCH
T ss_pred eEEEecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCHHHH------HHHHHHHhCCcEEEeccccccCCCcccccccch
Confidence 344554 5556877776543 4578999999988876432 2234566679999999999999876421111
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHcC-----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHH
Q 018947 97 ---------EPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW 162 (348)
Q Consensus 97 ---------~~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 162 (348)
....+.++.++|+.++++.+. .++++++|||+||.+++.+|.++| |++++++.+....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------ 150 (236)
T 1zi8_A 79 RQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------ 150 (236)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG------
T ss_pred hhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc------
Confidence 123467888899999998876 468999999999999999999998 9999887763210
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCC
Q 018947 163 LYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 242 (348)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 242 (348)
+....+.+++
T Consensus 151 ----------------------------------------------------------------------~~~~~~~~~~ 160 (236)
T 1zi8_A 151 ----------------------------------------------------------------------KQLNKVPEVK 160 (236)
T ss_dssp ----------------------------------------------------------------------GCGGGGGGCC
T ss_pred ----------------------------------------------------------------------cchhhhhhcC
Confidence 1122355778
Q ss_pred ccEEEEecCCCCCCc--hHHHHHHhhcc-CCcEEEEecCCCCCccccCh--------hhhHHHHHHHHhhc
Q 018947 243 CRSLIFVGESSPFHS--EAVHMTSKIDR-RYSALVEVQACGSMVTEEQP--------HAMLIPMEYFLMGY 302 (348)
Q Consensus 243 ~Pvl~i~g~~D~~~~--~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p--------~~~~~~i~~fl~~~ 302 (348)
+|+++++|++|.+++ ....+.+.+.. ...++++++++||....+.+ +++.+.+.+||++.
T Consensus 161 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 231 (236)
T 1zi8_A 161 HPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPL 231 (236)
T ss_dssp SCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHh
Confidence 999999999999983 45567777743 24899999999998877654 46889999999886
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=180.52 Aligned_cols=211 Identities=15% Similarity=0.091 Sum_probs=140.0
Q ss_pred CCCCeEEEeCCCCCCh--hhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHc
Q 018947 40 QDKPALVTYPDLALNY--MSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA-EVLNHF 116 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~--~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~-~~l~~l 116 (348)
..+++|||+||++++. ..|. .+...+..+|+|+++|+||||.|... .++++++++++. .+++.+
T Consensus 65 ~~~~~lvllhG~~~~~~~~~~~-------~~~~~l~~~~~v~~~d~~G~G~s~~~------~~~~~~~a~~~~~~l~~~~ 131 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPHEFT-------RLAGALRGIAPVRAVPQPGYEEGEPL------PSSMAAVAAVQADAVIRTQ 131 (300)
T ss_dssp SCSSEEEECCCSSTTCSTTTTH-------HHHHHTSSSCCBCCCCCTTSSTTCCB------CSSHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCcccCcHHHHH-------HHHHhcCCCceEEEecCCCCCCCCCC------CCCHHHHHHHHHHHHHHhc
Confidence 4678999999999876 4332 12355567899999999999997632 479999999988 466788
Q ss_pred CCCceeEEEeChhHHHHHHHHHhCC---CCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccc
Q 018947 117 GLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE 193 (348)
Q Consensus 117 ~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (348)
+.++++|+||||||.+++.+|.++| ++|+++|++++........ . ..+. ..+...++...
T Consensus 132 ~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~--~--~~~~-------------~~~~~~~~~~~ 194 (300)
T 1kez_A 132 GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA--M--NAWL-------------EELTATLFDRE 194 (300)
T ss_dssp SSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH--H--HHHH-------------HHHHGGGCCCC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH--H--HHHH-------------HHHHHHHHhCc
Confidence 8899999999999999999999988 4899999999876543311 0 0000 11112222211
Q ss_pred ccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEE
Q 018947 194 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSAL 273 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~ 273 (348)
... . ....... +..+...+.. . ....+++|+++|+|++|.+.+....+.+.++. ..++
T Consensus 195 ~~~---~-~~~~~~~------------~~~~~~~~~~-~----~~~~i~~P~lii~G~d~~~~~~~~~~~~~~~~-~~~~ 252 (300)
T 1kez_A 195 TVR---M-DDTRLTA------------LGAYDRLTGQ-W----RPRETGLPTLLVSAGEPMGPWPDDSWKPTWPF-EHDT 252 (300)
T ss_dssp SSC---C-CHHHHHH------------HHHHHHHTTT-C----CCCCCSCCBEEEEESSCSSCCCSSCCSCCCSS-CCEE
T ss_pred CCc---c-chHHHHH------------HHHHHHHHhc-C----CCCCCCCCEEEEEeCCCCCCCcccchhhhcCC-CCeE
Confidence 100 0 1111110 1111111111 1 24678999999999644333322233333332 3789
Q ss_pred EEecCCCCCccc-cChhhhHHHHHHHHhhcc
Q 018947 274 VEVQACGSMVTE-EQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 274 ~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 303 (348)
+++++ ||+.++ ++|+++++.|.+||++..
T Consensus 253 ~~i~g-gH~~~~~e~~~~~~~~i~~fl~~~~ 282 (300)
T 1kez_A 253 VAVPG-DHFTMVQEHADAIARHIDAWLGGGN 282 (300)
T ss_dssp EEESS-CTTTSSSSCSHHHHHHHHHHHTCC-
T ss_pred EEecC-CChhhccccHHHHHHHHHHHHHhcc
Confidence 99998 999997 999999999999998874
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-23 Score=166.05 Aligned_cols=174 Identities=19% Similarity=0.178 Sum_probs=131.2
Q ss_pred eeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018947 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (348)
Q Consensus 31 ~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~ 110 (348)
+++|...| .+|+|||+||++++....+. ......+.. ++.+|+||++ .++++++++++.
T Consensus 8 ~l~~~~~g--~~~~vv~~HG~~~~~~~~~~-----~~~~~~~~~---~~~v~~~~~~-----------~~~~~~~~~~~~ 66 (191)
T 3bdv_A 8 DLRLTEVS--QQLTMVLVPGLRDSDDEHWQ-----SHWERRFPH---WQRIRQREWY-----------QADLDRWVLAIR 66 (191)
T ss_dssp HHHHHHHH--TTCEEEEECCTTCCCTTSHH-----HHHHHHCTT---SEECCCSCCS-----------SCCHHHHHHHHH
T ss_pred ccccCCCC--CCceEEEECCCCCCchhhHH-----HHHHHhcCC---eEEEeccCCC-----------CcCHHHHHHHHH
Confidence 34443344 67899999999988733221 111233333 4567888874 257999999999
Q ss_pred HHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhh
Q 018947 111 EVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYF 190 (348)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (348)
++++.++ ++++++||||||.+++.+|.++|++|+++|++++......
T Consensus 67 ~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~-------------------------------- 113 (191)
T 3bdv_A 67 RELSVCT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF-------------------------------- 113 (191)
T ss_dssp HHHHTCS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG--------------------------------
T ss_pred HHHHhcC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc--------------------------------
Confidence 9999988 8999999999999999999999999999999998655210
Q ss_pred cccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhcc
Q 018947 191 SKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDR 268 (348)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~ 268 (348)
.. ... ..+.++++|+++++|++|.+++ ..+.+.+.+ +
T Consensus 114 --~~-------~~~-------------------------------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~ 152 (191)
T 3bdv_A 114 --EI-------DDR-------------------------------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-D 152 (191)
T ss_dssp --TC-------TTT-------------------------------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-T
T ss_pred --cC-------ccc-------------------------------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-C
Confidence 00 000 2356788999999999999983 455677766 4
Q ss_pred CCcEEEEecCCCCCccc----cChhhhHHHHHHHHhhc
Q 018947 269 RYSALVEVQACGSMVTE----EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 269 ~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~~ 302 (348)
.++++++++||+.+. +.|+.+ +.|.+||+++
T Consensus 153 --~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 153 --SELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp --CEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHHTT
T ss_pred --CcEEEeCCCCcccccccchhHHHHH-HHHHHHHHHh
Confidence 899999999999988 456555 9999999886
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=173.91 Aligned_cols=182 Identities=18% Similarity=0.193 Sum_probs=127.7
Q ss_pred EEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEe--CCCCCCCCCCCCCCCCCCCCHHH---HHH
Q 018947 33 SVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI--NPPGHEFGAAAISDDEPVLSVDD---LAD 107 (348)
Q Consensus 33 ~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~--D~~G~G~S~~~~~~~~~~~~~~~---~~~ 107 (348)
++...+++.+|+|||+||++++...|... ...+.++|.|+++ |++|+|.|..........++..+ .++
T Consensus 53 ~~~~~~~~~~p~vv~~HG~~~~~~~~~~~-------~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 125 (251)
T 2r8b_A 53 HKSRAGVAGAPLFVLLHGTGGDENQFFDF-------GARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATG 125 (251)
T ss_dssp EEEECCCTTSCEEEEECCTTCCHHHHHHH-------HHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHH
T ss_pred EEEeCCCCCCcEEEEEeCCCCCHhHHHHH-------HHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHH
Confidence 44455556789999999999887765321 3455667999999 89999977532111112234333 345
Q ss_pred HHHHHHHH----cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHH
Q 018947 108 QIAEVLNH----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (348)
Q Consensus 108 dl~~~l~~----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (348)
++.++++. ++.++++++|||+||.+++.+|.++|++|+++|++++......
T Consensus 126 ~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------- 180 (251)
T 2r8b_A 126 KMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------- 180 (251)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-------------------------
T ss_pred HHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-------------------------
Confidence 55555544 3889999999999999999999999999999999998765321
Q ss_pred HHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHH
Q 018947 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVH 261 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~ 261 (348)
. .....+++|+++++|++|.++ .....
T Consensus 181 -----------~----------------------------------------~~~~~~~~P~li~~g~~D~~~~~~~~~~ 209 (251)
T 2r8b_A 181 -----------K----------------------------------------ISPAKPTRRVLITAGERDPICPVQLTKA 209 (251)
T ss_dssp -----------C----------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHHH
T ss_pred -----------c----------------------------------------ccccccCCcEEEeccCCCccCCHHHHHH
Confidence 0 001235789999999999988 45667
Q ss_pred HHHhhccCCcEEE-EecCCCCCccccChhhhHHHHHHHHhh
Q 018947 262 MTSKIDRRYSALV-EVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 262 ~~~~~~~~~~~~~-~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+.+.++..+.++. +++++||..+.+.++. +.+||++
T Consensus 210 ~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~----~~~~l~~ 246 (251)
T 2r8b_A 210 LEESLKAQGGTVETVWHPGGHEIRSGEIDA----VRGFLAA 246 (251)
T ss_dssp HHHHHHHHSSEEEEEEESSCSSCCHHHHHH----HHHHHGG
T ss_pred HHHHHHHcCCeEEEEecCCCCccCHHHHHH----HHHHHHH
Confidence 8888873235554 7888999997776654 4555554
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=170.32 Aligned_cols=199 Identities=12% Similarity=0.096 Sum_probs=139.3
Q ss_pred CCceeEEEEccC--CCCCeEEEeCCCC---CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 28 SHGSLSVTIYGD--QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 28 ~~~~l~~~~~g~--~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
++..+.+..+.+ +.+|+|||+||.+ ++...|. .....+...||.|+++|+||+|. .++
T Consensus 47 ~~~~~~~~~~~p~~~~~p~vv~~HGgg~~~~~~~~~~------~~~~~l~~~G~~v~~~d~~~~~~-----------~~~ 109 (262)
T 2pbl_A 47 EGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSSWS------HLAVGALSKGWAVAMPSYELCPE-----------VRI 109 (262)
T ss_dssp SSTTCEEEEECCSSSCSEEEEEECCSTTTSCCGGGCG------GGGHHHHHTTEEEEEECCCCTTT-----------SCH
T ss_pred CCCCceEEEEccCCCCCCEEEEEcCcccccCChHHHH------HHHHHHHhCCCEEEEeCCCCCCC-----------CCh
Confidence 344555555432 4678999999954 4443322 23345557899999999999863 467
Q ss_pred HHHHHHHHHHHHHcCC---CceeEEEeChhHHHHHHHHHhC------CCCcceEEEecCCCCCCChHHHHHHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (348)
.++++|+.++++.+.. ++++++||||||.+++.+|.++ |++|+++|++++.........
T Consensus 110 ~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~------------ 177 (262)
T 2pbl_A 110 SEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR------------ 177 (262)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG------------
T ss_pred HHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHh------------
Confidence 8888888888877654 5999999999999999999988 899999999998765321100
Q ss_pred hhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCC
Q 018947 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (348)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 253 (348)
... ...+.. ..... .. ......+.++++|+++++|++|
T Consensus 178 -----~~~-----~~~~~~---------~~~~~-------------------~~----~~~~~~~~~~~~P~lii~G~~D 215 (262)
T 2pbl_A 178 -----TSM-----NEKFKM---------DADAA-------------------IA----ESPVEMQNRYDAKVTVWVGGAE 215 (262)
T ss_dssp -----STT-----HHHHCC---------CHHHH-------------------HH----TCGGGCCCCCSCEEEEEEETTS
T ss_pred -----hhh-----hhhhCC---------CHHHH-------------------Hh----cCcccccCCCCCCEEEEEeCCC
Confidence 000 000000 00000 00 0112234678899999999999
Q ss_pred CCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 254 PFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 254 ~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
.++ .....+.+.++ +++++++++||+.+.++++.....+.+++-
T Consensus 216 ~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 216 RPAFLDQAIWLVEAWD---ADHVIAFEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp CHHHHHHHHHHHHHHT---CEEEEETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHhC---CeEEEeCCCCcchHHhhcCCCCcHHHHHHh
Confidence 977 45666788877 889999999999999999998888887763
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=174.57 Aligned_cols=169 Identities=14% Similarity=0.119 Sum_probs=130.0
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN----- 114 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~----- 114 (348)
+..|+|||+||++++...|. .....+.++||.|+++|+||+|.|... ..+++.+.+..+.+
T Consensus 94 ~~~p~vv~~HG~~~~~~~~~------~~~~~la~~G~~vv~~d~~g~g~s~~~--------~~~d~~~~~~~l~~~~~~~ 159 (306)
T 3vis_A 94 NTYGAIAISPGYTGTQSSIA------WLGERIASHGFVVIAIDTNTTLDQPDS--------RARQLNAALDYMLTDASSA 159 (306)
T ss_dssp SCEEEEEEECCTTCCHHHHH------HHHHHHHTTTEEEEEECCSSTTCCHHH--------HHHHHHHHHHHHHHTSCHH
T ss_pred CCCCEEEEeCCCcCCHHHHH------HHHHHHHhCCCEEEEecCCCCCCCcch--------HHHHHHHHHHHHHhhcchh
Confidence 35788999999998877653 233566678999999999999987421 12333322222222
Q ss_pred ---HcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhc
Q 018947 115 ---HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFS 191 (348)
Q Consensus 115 ---~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (348)
.++.++++++|||+||.+++.+|.++|+ ++++|++++...
T Consensus 160 ~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------------------------------ 202 (306)
T 3vis_A 160 VRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------------------------------ 202 (306)
T ss_dssp HHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------------------------------
T ss_pred hhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------------------------------
Confidence 2345789999999999999999999997 999999887433
Q ss_pred ccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc---hHHHHHHhhcc
Q 018947 192 KEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS---EAVHMTSKIDR 268 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~---~~~~~~~~~~~ 268 (348)
...+.++++|+++++|++|.+++ ....+.+.+++
T Consensus 203 -------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~ 239 (306)
T 3vis_A 203 -------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPS 239 (306)
T ss_dssp -------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCT
T ss_pred -------------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhcc
Confidence 01234678999999999999883 36678888876
Q ss_pred C-CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 269 R-YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 269 ~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
. ..++++++++||..+.+.++++.+.+.+||++.
T Consensus 240 ~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~ 274 (306)
T 3vis_A 240 PTDKAYLELDGASHFAPNITNKTIGMYSVAWLKRF 274 (306)
T ss_dssp TSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCceEEEECCCCccchhhchhHHHHHHHHHHHHH
Confidence 3 377999999999999999999999999999886
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-22 Score=164.93 Aligned_cols=206 Identities=8% Similarity=-0.010 Sum_probs=141.2
Q ss_pred ccceeecCCceeEEEEccCC----CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC-
Q 018947 21 KDNLIKTSHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD- 95 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~----~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~- 95 (348)
+...+.+++..+.++.+.+. ..|+||++||++++...+. ..+..+.+.||.|+++|+||+|.+......
T Consensus 7 ~~~~~~~~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~~~~------~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~ 80 (241)
T 3f67_A 7 GETSIPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHEHIR------DLCRRLAQEGYLAIAPELYFRQGDPNEYHDI 80 (241)
T ss_dssp EEEEEEETTEEEEEEEEEETTCCSCEEEEEEECCTTCSCHHHH------HHHHHHHHTTCEEEEECTTTTTCCGGGCCSH
T ss_pred eeEEEecCCcceEEEEecCCCCCCCCCEEEEEcCcCccCHHHH------HHHHHHHHCCcEEEEecccccCCCCCchhhH
Confidence 34455567778877665322 3479999999988765432 233456678999999999999876533110
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHcC-----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHH
Q 018947 96 ------DEPVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (348)
Q Consensus 96 ------~~~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (348)
.....+.++..+|+.++++.+. .++++++|||+||.+++.++.++|+ +.+++++.+......
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~------ 153 (241)
T 3f67_A 81 PTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEK------ 153 (241)
T ss_dssp HHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCC------
T ss_pred HHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCC------
Confidence 0112345677888888887654 4579999999999999999999987 777776554322110
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCcc
Q 018947 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (348)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 244 (348)
... ...+....+.++++|
T Consensus 154 ----------------------------~~~----------------------------------~~~~~~~~~~~~~~P 171 (241)
T 3f67_A 154 ----------------------------SLN----------------------------------SPKHPVDIAVDLNAP 171 (241)
T ss_dssp ----------------------------CSS----------------------------------SCCCHHHHGGGCCSC
T ss_pred ----------------------------ccC----------------------------------CccCHHHhhhhcCCC
Confidence 000 001223345677899
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhcc--CCcEEEEecCCCCCcccc--------ChhhhHHHHHHHHhh
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDR--RYSALVEVQACGSMVTEE--------QPHAMLIPMEYFLMG 301 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e--------~p~~~~~~i~~fl~~ 301 (348)
+++++|++|.+++ ....+.+.+.. ...+++++++++|....+ ..+++.+.+.+||++
T Consensus 172 ~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 172 VLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp EEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999999999983 45567777642 348999999999987643 335677888999875
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-21 Score=172.13 Aligned_cols=267 Identities=9% Similarity=-0.024 Sum_probs=149.5
Q ss_pred ceeecC-CceeEEEEc---c--CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 23 NLIKTS-HGSLSVTIY---G--DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 23 ~~v~~~-~~~l~~~~~---g--~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
..+.+. |..+++..+ + ....|+||++||++++...|... ....+..+||.|+++|+||+|.|....
T Consensus 71 ~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~-----~~~~l~~~G~~v~~~d~~g~g~s~~~~--- 142 (367)
T 2hdw_A 71 VTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGL-----YAQTMAERGFVTLAFDPSYTGESGGQP--- 142 (367)
T ss_dssp EEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHH-----HHHHHHHTTCEEEEECCTTSTTSCCSS---
T ss_pred EEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHH-----HHHHHHHCCCEEEEECCCCcCCCCCcC---
Confidence 334443 557776654 2 23457899999999877655321 224566789999999999999886431
Q ss_pred CCCCCHHHHHHHHHHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHH----HHH
Q 018947 97 EPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL----YNK 166 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~ 166 (348)
....+....++|+.++++.+ +.++++++|||+||.+++.+|.++| +|+++|++++........... ...
T Consensus 143 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~ 221 (367)
T 2hdw_A 143 RNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLE 221 (367)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHH
T ss_pred ccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchH
Confidence 12234667777777776655 2468999999999999999999998 699999998652100000000 000
Q ss_pred HHHHHHHhhccchhHHHHHHHhhhccc-ccCCCCCCChHHHHHHHHHHhhh---chh-------hHHHHHHHHcCCccHH
Q 018947 167 VMSNLLYYYGMCGVVKELLLKRYFSKE-VRGNAQVPESDIVQACRRLLDER---QSS-------NVWHFLEAINGRPDIS 235 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~ 235 (348)
.......... .... .......+... ...................+... .+. ........+.. .+..
T Consensus 222 ~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 298 (367)
T 2hdw_A 222 QRTRTLEQLG-QQRW-KDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMN-MPIL 298 (367)
T ss_dssp HHHHHHHHHH-HHHH-HHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTT-SCSC
T ss_pred HHHHHHHHHH-HHHH-HHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcC-CChh
Confidence 0000000000 0000 00000000000 00000000112222222221110 000 00000111111 2334
Q ss_pred hhhccCC-ccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccChhh-hHHHHHHHHhhc
Q 018947 236 EGLRKLQ-CRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA-MLIPMEYFLMGY 302 (348)
Q Consensus 236 ~~l~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~-~~~~i~~fl~~~ 302 (348)
..+.+++ +|+|+++|++|........+.+.. ....++++++++||+.+.+.|+. +.+.|.+||++.
T Consensus 299 ~~~~~i~~~PvLii~G~~D~~~~~~~~~~~~~-~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~ 366 (367)
T 2hdw_A 299 TYIKEISPRPILLIHGERAHSRYFSETAYAAA-AEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEH 366 (367)
T ss_dssp TTGGGGTTSCEEEEEETTCTTHHHHHHHHHHS-CSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHH
T ss_pred HhHHhhcCCceEEEecCCCCCHHHHHHHHHhC-CCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhh
Confidence 5677888 999999999999334555555542 23489999999999988887775 589999999764
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=167.10 Aligned_cols=178 Identities=10% Similarity=0.088 Sum_probs=128.2
Q ss_pred CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEe-------------------CCCCCCCCCCCCCCCCCC
Q 018947 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI-------------------NPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 39 ~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~-------------------D~~G~G~S~~~~~~~~~~ 99 (348)
...+|+|||+||++++...|.. ....+...||.|+++ |++|+ .+. .....
T Consensus 20 ~~~~~~vv~lHG~~~~~~~~~~------~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~----~~~~~ 88 (232)
T 1fj2_A 20 RKATAAVIFLHGLGDTGHGWAE------AFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPD----SQEDE 88 (232)
T ss_dssp SCCSEEEEEECCSSSCHHHHHH------HHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STT----CCBCH
T ss_pred CCCCceEEEEecCCCccchHHH------HHHHHhcCCcEEEecCCCccccccccccccccccccccC-Ccc----ccccc
Confidence 3567899999999998876532 223444569999998 66666 222 11234
Q ss_pred CCHHHHHHHHHHHHHHc---CC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 100 LSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
.++++.++++.++++.+ +. ++++++|||+||.+++.++.++|++|+++|++++.......
T Consensus 89 ~~~~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~--------------- 153 (232)
T 1fj2_A 89 SGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS--------------- 153 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG---------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc---------------
Confidence 67889999999999886 65 79999999999999999999999999999999986542110
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
. . . ....+..+++|+++++|++|.
T Consensus 154 -------------------~-~-----~-------------------------------~~~~~~~~~~P~l~i~G~~D~ 177 (232)
T 1fj2_A 154 -------------------F-P-----Q-------------------------------GPIGGANRDISILQCHGDCDP 177 (232)
T ss_dssp -------------------S-C-----S-------------------------------SCCCSTTTTCCEEEEEETTCS
T ss_pred -------------------c-c-----c-------------------------------cccccccCCCCEEEEecCCCc
Confidence 0 0 0 001234678999999999999
Q ss_pred CCc--hHHHHHHhhcc----CCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 255 FHS--EAVHMTSKIDR----RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 255 ~~~--~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+++ ....+.+.+.. ++.++++++++||..+.+.+ +.+.+||++.
T Consensus 178 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~----~~i~~~l~~~ 227 (232)
T 1fj2_A 178 LVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEM----MDVKQFIDKL 227 (232)
T ss_dssp SSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHH----HHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHH----HHHHHHHHHh
Confidence 983 45556666632 23899999999999854444 5556666553
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=165.11 Aligned_cols=177 Identities=12% Similarity=0.122 Sum_probs=131.0
Q ss_pred cCCCCCeEEEeCCCCCChhhhccccccchhhhhhcc--CCeEEEEeCCC-------------------CCCCCCCCCCCC
Q 018947 38 GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPP-------------------GHEFGAAAISDD 96 (348)
Q Consensus 38 g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~--~g~~vi~~D~~-------------------G~G~S~~~~~~~ 96 (348)
+.+.+|+|||+||++++...|. .....+.+ .||.|+++|+| |+|.+..
T Consensus 10 ~~~~~~~vv~~HG~~~~~~~~~------~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~----- 78 (218)
T 1auo_A 10 AKPADACVIWLHGLGADRYDFM------PVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARS----- 78 (218)
T ss_dssp SSCCSEEEEEECCTTCCTTTTH------HHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCE-----
T ss_pred CCCCCcEEEEEecCCCChhhHH------HHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccc-----
Confidence 4457789999999998876643 22234444 89999998766 4443321
Q ss_pred CCCCCHHHHHHHHHHHHHHc---CC--CceeEEEeChhHHHHHHHHH-hCCCCcceEEEecCCCCCCChHHHHHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAM-KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (348)
....++++.++++.++++.+ +. ++++++|||+||.+++.+|. ++|++++++|++++......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~------------ 146 (218)
T 1auo_A 79 ISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG------------ 146 (218)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC------------
T ss_pred cchHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCch------------
Confidence 23467888899999999876 44 48999999999999999999 99999999999998654300
Q ss_pred HHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEec
Q 018947 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 250 (348)
+ ... . ....+++|+++++|
T Consensus 147 ------~-------------~~~--------~----------------------------------~~~~~~~P~l~i~G 165 (218)
T 1auo_A 147 ------D-------------ELE--------L----------------------------------SASQQRIPALCLHG 165 (218)
T ss_dssp ------T-------------TCC--------C----------------------------------CHHHHTCCEEEEEE
T ss_pred ------h-------------hhh--------h----------------------------------hhcccCCCEEEEEe
Confidence 0 000 0 01345789999999
Q ss_pred CCCCCCc--hHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHH
Q 018947 251 ESSPFHS--EAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFL 299 (348)
Q Consensus 251 ~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 299 (348)
++|.+++ ..+.+.+.+++. ..++++++ +||..+.+.++++.+.|.++|
T Consensus 166 ~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 166 QYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp TTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHHH
T ss_pred CCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHHh
Confidence 9999983 456677777753 38899999 999998887777777666665
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-22 Score=169.35 Aligned_cols=212 Identities=12% Similarity=0.040 Sum_probs=135.9
Q ss_pred ccCCCCCeEEEeCCCCCChhhhccccccchhhhhh----ccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 018947 37 YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSL----LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV 112 (348)
Q Consensus 37 ~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~----~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~ 112 (348)
.+++..|+|||+||.+...... ....|...+..+ ...||.|+++|+|+.+.+. ....++++.+.+..+
T Consensus 36 ~~~~~~p~vv~lHGgg~~~g~~-~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~-------~~~~~~d~~~~~~~l 107 (273)
T 1vkh_A 36 ISQNTREAVIYIHGGAWNDPEN-TPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-------NPRNLYDAVSNITRL 107 (273)
T ss_dssp CCTTCCEEEEEECCSTTTCTTC-CGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-------TTHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEECCCcccCCcC-ChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCC-------CCcHHHHHHHHHHHH
Confidence 3445778999999965321000 001122222333 3789999999999876542 235678888888888
Q ss_pred HHHcCCCceeEEEeChhHHHHHHHHHhC-----------------CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhh
Q 018947 113 LNHFGLGAVMCMGVTAGAYILTLFAMKY-----------------RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (348)
Q Consensus 113 l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----------------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (348)
++.++.++++++||||||.+++.+|.++ |++|+++|++++......... ..
T Consensus 108 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~------------~~ 175 (273)
T 1vkh_A 108 VKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLI------------EY 175 (273)
T ss_dssp HHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHH------------HC
T ss_pred HHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhh------------hc
Confidence 8888989999999999999999999986 889999999987654211000 00
Q ss_pred ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
... ..+....+...... . ..... . ...+ ....+..+++|+++++|++|.+
T Consensus 176 --~~~--~~~~~~~~~~~~~~-~---~~~~~-~------------~~~~---------~~~~~~~~~~P~lii~G~~D~~ 225 (273)
T 1vkh_A 176 --PEY--DCFTRLAFPDGIQM-Y---EEEPS-R------------VMPY---------VKKALSRFSIDMHLVHSYSDEL 225 (273)
T ss_dssp --GGG--HHHHHHHCTTCGGG-C---CCCHH-H------------HHHH---------HHHHHHHHTCEEEEEEETTCSS
T ss_pred --ccH--HHHHHHHhcccccc-h---hhccc-c------------cChh---------hhhcccccCCCEEEEecCCcCC
Confidence 000 11112222100000 0 00000 0 0000 1112233789999999999999
Q ss_pred C--chHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHH
Q 018947 256 H--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFL 299 (348)
Q Consensus 256 ~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 299 (348)
+ .....+.+.++.. .+++++++++||..++++ +++.+.|.+||
T Consensus 226 vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 226 LTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp CCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred CChHHHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 8 4566677777642 378999999999999888 88999999886
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-21 Score=173.71 Aligned_cols=238 Identities=11% Similarity=0.029 Sum_probs=149.1
Q ss_pred CCCccceeecCCceeEEEEccC---CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
...++..+..+++.+....+.+ ...|+||++||++++...++.. ....+...||.|+++|+||+|.|...
T Consensus 166 ~~~~~v~i~~~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~-----~~~~l~~~G~~V~~~D~~G~G~s~~~-- 238 (415)
T 3mve_A 166 YIIKQLEIPFEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRL-----FRDHLAKHDIAMLTVDMPSVGYSSKY-- 238 (415)
T ss_dssp SEEEEEEEECSSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHH-----HHHTTGGGTCEEEEECCTTSGGGTTS--
T ss_pred CCeEEEEEEECCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHH-----HHHHHHhCCCEEEEECCCCCCCCCCC--
Confidence 3445566777888887666532 3457999999998885544322 12455578999999999999998643
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcC---CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNHFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
....+.++++.++.+++..+. .++++++|||+||.+++.+|..+|++|+++|++++........ ...
T Consensus 239 --~~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-----~~~--- 308 (415)
T 3mve_A 239 --PLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFAS-----PQK--- 308 (415)
T ss_dssp --CCCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHC-----HHH---
T ss_pred --CCCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccccccc-----HHH---
Confidence 123446677777777776654 4689999999999999999999999999999999874311000 000
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcC-CccHHhhhccCCccEEEEec
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING-RPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~Pvl~i~g 250 (348)
........ ...+...++.... ... .+...+ ..+.. ...... ..++++|+|+++|
T Consensus 309 --~~~~~~~~-~~~~~~~~g~~~~------~~~---~~~~~~------------~~~~~~~~~~~~-~~~i~~PvLii~G 363 (415)
T 3mve_A 309 --LQQMPKMY-LDVLASRLGKSVV------DIY---SLSGQM------------AAWSLKVQGFLS-SRKTKVPILAMSL 363 (415)
T ss_dssp --HTTSCHHH-HHHHHHHTTCSSB------CHH---HHHHHG------------GGGCTTTTTTTT-SSCBSSCEEEEEE
T ss_pred --HHHhHHHH-HHHHHHHhCCCcc------CHH---HHHHHH------------hhcCcccccccc-cCCCCCCEEEEEe
Confidence 00111111 1111111111110 000 011100 00000 000000 3578999999999
Q ss_pred CCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 251 ESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 251 ~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++|.+++ ....+.+..++ .++++++++. ..+.++++.+.+.+||++.
T Consensus 364 ~~D~~vp~~~~~~l~~~~~~--~~l~~i~g~~---~h~~~~~~~~~i~~fL~~~ 412 (415)
T 3mve_A 364 EGDPVSPYSDNQMVAFFSTY--GKAKKISSKT---ITQGYEQSLDLAIKWLEDE 412 (415)
T ss_dssp TTCSSSCHHHHHHHHHTBTT--CEEEEECCCS---HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhCCC--ceEEEecCCC---cccchHHHHHHHHHHHHHH
Confidence 9999984 44556666655 8999999732 2237788899999999864
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=172.94 Aligned_cols=239 Identities=13% Similarity=0.063 Sum_probs=142.3
Q ss_pred ccceeecCCceeEEEEccC---CCCCeEEEeCCCC---CChhhhccccccchhhhhhccC-CeEEEEeCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~---~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~ 93 (348)
+...+...++.+.+..+.+ ...|+||++||.+ ++...|. .....+... ||.|+++|+||+|++..+
T Consensus 49 ~~~~i~~~~g~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~~~~------~~~~~la~~~g~~v~~~d~rg~g~~~~~- 121 (311)
T 2c7b_A 49 RDVHIPVSGGSIRARVYFPKKAAGLPAVLYYHGGGFVFGSIETHD------HICRRLSRLSDSVVVSVDYRLAPEYKFP- 121 (311)
T ss_dssp EEEEEEETTEEEEEEEEESSSCSSEEEEEEECCSTTTSCCTGGGH------HHHHHHHHHHTCEEEEECCCCTTTSCTT-
T ss_pred EEEEecCCCCcEEEEEEecCCCCCCcEEEEECCCcccCCChhhhH------HHHHHHHHhcCCEEEEecCCCCCCCCCC-
Confidence 4445666667777666532 2347899999987 5554432 222344444 999999999999987533
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCC--CceeEEEeChhHHHHHHHHHhCCC----CcceEEEecCCCCCCChHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLYNKV 167 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (348)
....+..+.++++.+.++.+++ ++++++|||+||.+++.+|.++|+ +++++|+++|............ ..
T Consensus 122 ---~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-~~ 197 (311)
T 2c7b_A 122 ---TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASL-VE 197 (311)
T ss_dssp ---HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHH-HH
T ss_pred ---ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCC-cc
Confidence 1122344445555555566666 689999999999999999988876 4999999999876321100000 00
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEE
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 247 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 247 (348)
.. .. ..... .......+...+......... .........+..+. |+++
T Consensus 198 ~~----~~---------------~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~p~~~~l~~~~-P~li 245 (311)
T 2c7b_A 198 FG----VA---------------ETTSL------PIELMVWFGRQYLKRPEEAYD------FKASPLLADLGGLP-PALV 245 (311)
T ss_dssp HH----HC---------------TTCSS------CHHHHHHHHHHHCSSTTGGGS------TTTCGGGSCCTTCC-CEEE
T ss_pred HH----Hh---------------ccCCC------CHHHHHHHHHHhCCCCccccC------cccCcccccccCCC-cceE
Confidence 00 00 00000 111111111111110000000 00011112334444 9999
Q ss_pred EecCCCCCCchHHHHHHhhcc--CCcEEEEecCCCCCcc-----ccChhhhHHHHHHHHhhc
Q 018947 248 FVGESSPFHSEAVHMTSKIDR--RYSALVEVQACGSMVT-----EEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-----~e~p~~~~~~i~~fl~~~ 302 (348)
++|++|.+++....+.+.+.. ..++++++++++|... .++++++.+.+.+||++.
T Consensus 246 i~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (311)
T 2c7b_A 246 VTAEYDPLRDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSG 307 (311)
T ss_dssp EEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHH
Confidence 999999998655554444432 2488999999999776 356688999999999875
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-21 Score=167.75 Aligned_cols=230 Identities=8% Similarity=-0.015 Sum_probs=141.5
Q ss_pred ccceeec-CCceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
+...+.+ +|.++.+..+.+ +..|+||++||++++...+. ....++..||.|+++|+||+|.|......
T Consensus 69 ~~~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~~~-------~~~~l~~~G~~v~~~d~rG~g~s~~~~~~ 141 (337)
T 1vlq_A 69 YDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPH-------DWLFWPSMGYICFVMDTRGQGSGWLKGDT 141 (337)
T ss_dssp EEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGG-------GGCHHHHTTCEEEEECCTTCCCSSSCCCC
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCCch-------hhcchhhCCCEEEEecCCCCCCcccCCCC
Confidence 3344444 555777666532 34578999999987753221 12356678999999999999976432000
Q ss_pred ---------------------CCCCCCHHHHHHHHHHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEE
Q 018947 96 ---------------------DEPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLI 148 (348)
Q Consensus 96 ---------------------~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv 148 (348)
....+.+....+|+.++++.+ +.++++++|||+||.+++.+|..+| +|+++|
T Consensus 142 ~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~v 220 (337)
T 1vlq_A 142 PDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALL 220 (337)
T ss_dssp CBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEE
T ss_pred cccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEE
Confidence 011344567777877777665 2358999999999999999999998 699999
Q ss_pred EecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHH
Q 018947 149 LVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI 228 (348)
Q Consensus 149 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (348)
++++.... ..... ......... ....++... .......+..+
T Consensus 221 l~~p~~~~--~~~~~---------~~~~~~~~~---~~~~~~~~~------------------------~~~~~~~~~~~ 262 (337)
T 1vlq_A 221 CDVPFLCH--FRRAV---------QLVDTHPYA---EITNFLKTH------------------------RDKEEIVFRTL 262 (337)
T ss_dssp EESCCSCC--HHHHH---------HHCCCTTHH---HHHHHHHHC------------------------TTCHHHHHHHH
T ss_pred ECCCcccC--HHHHH---------hcCCCcchH---HHHHHHHhC------------------------chhHHHHHHhh
Confidence 98886542 11100 000000000 001111100 00111111111
Q ss_pred cCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 229 NGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 229 ~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
. ..+....+.++++|+|+++|++|.++ .....+.+.++. .+++++++++||.... ++..+.+.+||.+
T Consensus 263 ~-~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~-~~~~~~~~~~gH~~~~---~~~~~~~~~fl~~ 332 (337)
T 1vlq_A 263 S-YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGGG---SFQAVEQVKFLKK 332 (337)
T ss_dssp H-TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTTH---HHHHHHHHHHHHH
T ss_pred h-hccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC-CcEEEEcCCCCCCCcc---hhhHHHHHHHHHH
Confidence 1 13444556788999999999999998 455567788875 3789999999998542 2345566666654
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=160.83 Aligned_cols=176 Identities=13% Similarity=0.161 Sum_probs=128.9
Q ss_pred EccCCCCCeEEEeCCCCCChhhhccccccchhhhhhcc--CCeEEEEeCCC-------------------CCCCCCCCCC
Q 018947 36 IYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPP-------------------GHEFGAAAIS 94 (348)
Q Consensus 36 ~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~--~g~~vi~~D~~-------------------G~G~S~~~~~ 94 (348)
..+++.+|+|||+||++++...|. ..+..+.. .||.|+++|+| |+|.+.
T Consensus 18 ~~~~~~~~~vv~lHG~~~~~~~~~------~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~---- 87 (226)
T 3cn9_A 18 LDAPNADACIIWLHGLGADRTDFK------PVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR---- 87 (226)
T ss_dssp ECCTTCCEEEEEECCTTCCGGGGH------HHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT----
T ss_pred ccCCCCCCEEEEEecCCCChHHHH------HHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc----
Confidence 344567889999999998876543 22234444 89999998777 555432
Q ss_pred CCCCCCCHHHHHHHHHHHHHHc---CC--CceeEEEeChhHHHHHHHHH-hCCCCcceEEEecCCCCCCChHHHHHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNHF---GL--GAVMCMGVTAGAYILTLFAM-KYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l---~~--~~v~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (348)
.....++++.++++.++++.+ +. ++++++|||+||.+++.+|. ++|++++++|++++.......
T Consensus 88 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~--------- 157 (226)
T 3cn9_A 88 -AIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD--------- 157 (226)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG---------
T ss_pred -cccchhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh---------
Confidence 123467889999999999887 55 58999999999999999999 999999999999985432100
Q ss_pred HHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEE
Q 018947 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i 248 (348)
+ .. . ...+++|++++
T Consensus 158 --------------------~---~~-------~-----------------------------------~~~~~~P~lii 172 (226)
T 3cn9_A 158 --------------------L---AL-------D-----------------------------------ERHKRIPVLHL 172 (226)
T ss_dssp --------------------C---CC-------C-----------------------------------TGGGGCCEEEE
T ss_pred --------------------h---hh-------c-----------------------------------ccccCCCEEEE
Confidence 0 00 0 14567899999
Q ss_pred ecCCCCCCc--hHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 249 VGESSPFHS--EAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 249 ~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+|++|.+++ ....+.+.+++. ..++++++ +||..+.+.+++ +.+||++
T Consensus 173 ~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~----i~~~l~~ 224 (226)
T 3cn9_A 173 HGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHD----IGAWLRK 224 (226)
T ss_dssp EETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHH----HHHHHHH
T ss_pred ecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhhHHH----HHHHHHh
Confidence 999999983 455677777643 38899999 999987766554 5555543
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=169.91 Aligned_cols=229 Identities=10% Similarity=-0.022 Sum_probs=140.0
Q ss_pred ecCCceeEEEEccCCCCCeEEEeCCCCC---Chhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 26 KTSHGSLSVTIYGDQDKPALVTYPDLAL---NYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 26 ~~~~~~l~~~~~g~~~~p~vvllHG~~~---~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
..++..++++......+|+|||+||.+. +...|. ..+..+. ..||+|+++|+||.+... ....
T Consensus 80 ~~~~~~~~~~~p~~~~~p~vv~lHGgg~~~~~~~~~~------~~~~~la~~~g~~vi~~D~r~~~~~~-------~~~~ 146 (326)
T 3d7r_A 80 SLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHW------RLLDKITLSTLYEVVLPIYPKTPEFH-------IDDT 146 (326)
T ss_dssp EETTEEEEEEESTTCCSSEEEEECCSTTTSCCCHHHH------HHHHHHHHHHCSEEEEECCCCTTTSC-------HHHH
T ss_pred EECCEEEEEEeeCCCCCeEEEEECCCcccCCCCHHHH------HHHHHHHHHhCCEEEEEeCCCCCCCC-------chHH
Confidence 3355555544433356789999999652 333322 2223444 349999999999975432 2245
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCC----cceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
++++++.+..+++.++.++++|+|||+||.+|+.+|.++|++ ++++|+++|............ . ........
T Consensus 147 ~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~-~---~~~~~~~~ 222 (326)
T 3d7r_A 147 FQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDIS-D---ALIEQDAV 222 (326)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCC-H---HHHHHCSS
T ss_pred HHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHH-h---hhcccCcc
Confidence 778888888888888889999999999999999999988877 999999998765421100000 0 00000000
Q ss_pred chhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc
Q 018947 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS 257 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~ 257 (348)
. .......+...+....... .. ........+.. -+|+|+++|++|..++
T Consensus 223 ~-----------------------~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~-~~P~lii~G~~D~~~~ 271 (326)
T 3d7r_A 223 L-----------------------SQFGVNEIMKKWANGLPLT-DK------RISPINGTIEG-LPPVYMFGGGREMTHP 271 (326)
T ss_dssp C-----------------------CHHHHHHHHHHHHTTSCTT-ST------TTSGGGSCCTT-CCCEEEEEETTSTTHH
T ss_pred c-----------------------CHHHHHHHHHHhcCCCCCC-CC------eECcccCCccc-CCCEEEEEeCcccchH
Confidence 0 0111111111100000000 00 00001111222 2599999999998666
Q ss_pred hHHHHHHhhcc--CCcEEEEecCCCCCccc---cChhhhHHHHHHHHhhc
Q 018947 258 EAVHMTSKIDR--RYSALVEVQACGSMVTE---EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 258 ~~~~~~~~~~~--~~~~~~~~~~~gH~~~~---e~p~~~~~~i~~fl~~~ 302 (348)
....+.+.+.. ..+++++++++||..+. ++++++.+.|.+||++.
T Consensus 272 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~ 321 (326)
T 3d7r_A 272 DMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDED 321 (326)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHH
Confidence 55556555543 23799999999999887 88899999999999875
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=158.16 Aligned_cols=190 Identities=10% Similarity=-0.022 Sum_probs=120.5
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCce
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v 121 (348)
.|+|||+||++++..++....+ .........+|+|+++|+||||+ +..+++..+++....+++
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l--~~~~~~~~~~~~v~~pdl~~~g~---------------~~~~~l~~~~~~~~~~~i 64 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTF--KSWLQQHHPHIEMQIPQLPPYPA---------------EAAEMLESIVMDKAGQSI 64 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHH--HHHHHHHCTTSEEECCCCCSSHH---------------HHHHHHHHHHHHHTTSCE
T ss_pred CcEEEEeCCCCCCCCccHHHHH--HHHHHHcCCCcEEEEeCCCCCHH---------------HHHHHHHHHHHhcCCCcE
Confidence 4899999999888765421110 00012223579999999999974 456778888888888999
Q ss_pred eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCC
Q 018947 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201 (348)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (348)
+|+||||||.+|+.+|.++|..+..++...+.. . ... ....... ..........
T Consensus 65 ~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~------~-----~~~----~~~~~~~------~~~~~~~~~~----- 118 (202)
T 4fle_A 65 GIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPF------E-----LLS----DYLGENQ------NPYTGQKYVL----- 118 (202)
T ss_dssp EEEEETHHHHHHHHHHHHTTCCEEEESCCSSHH------H-----HGG----GGCEEEE------CTTTCCEEEE-----
T ss_pred EEEEEChhhHHHHHHHHHhcccchheeeccchH------H-----HHH----Hhhhhhc------cccccccccc-----
Confidence 999999999999999999998877665433210 0 000 0000000 0000000000
Q ss_pred ChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCC
Q 018947 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGS 281 (348)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 281 (348)
...... .. ........++++|+|+|+|++|.+++... ..+.+++ +++++++|+||
T Consensus 119 ~~~~~~----------------~~------~~~~~~~~~~~~P~LiihG~~D~~Vp~~~-s~~l~~~--~~l~i~~g~~H 173 (202)
T 4fle_A 119 ESRHIY----------------DL------KAMQIEKLESPDLLWLLQQTGDEVLDYRQ-AVAYYTP--CRQTVESGGNH 173 (202)
T ss_dssp CHHHHH----------------HH------HTTCCSSCSCGGGEEEEEETTCSSSCHHH-HHHHTTT--SEEEEESSCCT
T ss_pred hHHHHH----------------HH------HhhhhhhhccCceEEEEEeCCCCCCCHHH-HHHHhhC--CEEEEECCCCc
Confidence 000000 00 01122355788999999999999995433 2344555 89999999999
Q ss_pred CccccChhhhHHHHHHHHhh
Q 018947 282 MVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 282 ~~~~e~p~~~~~~i~~fl~~ 301 (348)
. +++++++.+.|.+||+-
T Consensus 174 ~--~~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 174 A--FVGFDHYFSPIVTFLGL 191 (202)
T ss_dssp T--CTTGGGGHHHHHHHHTC
T ss_pred C--CCCHHHHHHHHHHHHhh
Confidence 5 46778899999999973
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-20 Score=161.71 Aligned_cols=231 Identities=10% Similarity=0.069 Sum_probs=142.1
Q ss_pred cceeec-CCceeEEEEcc---CCCCCeEEEeCCCCCC-hhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC-
Q 018947 22 DNLIKT-SHGSLSVTIYG---DQDKPALVTYPDLALN-YMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD- 95 (348)
Q Consensus 22 ~~~v~~-~~~~l~~~~~g---~~~~p~vvllHG~~~~-~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~- 95 (348)
...+.+ +|.++.+..+. ....|+||++||++++ ...+.. ...++..||.|+++|+||+|.|......
T Consensus 58 ~~~~~~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~~~~-------~~~l~~~g~~v~~~d~rg~g~s~~~~~~~ 130 (318)
T 1l7a_A 58 RLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHE-------MVNWALHGYATFGMLVRGQQRSEDTSISP 130 (318)
T ss_dssp EEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHH-------HHHHHHTTCEEEEECCTTTSSSCCCCCCS
T ss_pred EEEEEccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCCccc-------ccchhhCCcEEEEecCCCCCCCCCccccc
Confidence 334444 45467766553 2355789999999988 654321 1356678999999999999988744110
Q ss_pred -------------CCCCCCHHHHHHHHHHHHHHcC------CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 96 -------------DEPVLSVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 96 -------------~~~~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
....+.+...++|+.++++.+. .++++++|||+||.+++.+|..+|+ +.++|+++|....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~ 209 (318)
T 1l7a_A 131 HGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN 209 (318)
T ss_dssp SCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC
T ss_pred CCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccC
Confidence 0112335666777777665542 2689999999999999999999886 8888887775432
Q ss_pred CChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHh
Q 018947 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISE 236 (348)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (348)
..... . ........ .+..++.... .... ........ ...+...
T Consensus 210 --~~~~~------~---~~~~~~~~---~~~~~~~~~~-------~~~~---------------~~~~~~~~-~~~~~~~ 252 (318)
T 1l7a_A 210 --FERAI------D---VALEQPYL---EINSFFRRNG-------SPET---------------EVQAMKTL-SYFDIMN 252 (318)
T ss_dssp --HHHHH------H---HCCSTTTT---HHHHHHHHSC-------CHHH---------------HHHHHHHH-HTTCHHH
T ss_pred --HHHHH------h---cCCcCccH---HHHHHHhccC-------Cccc---------------HHHHHHhh-ccccHHH
Confidence 11000 0 00000000 0000000000 0000 00111111 1134455
Q ss_pred hhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 237 GLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 237 ~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.++++|+++++|++|.++ .....+.+.++. .+++++++++||.. ..++.+.+.+||++.
T Consensus 253 ~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~-~~~~~~~~~~~H~~----~~~~~~~~~~fl~~~ 315 (318)
T 1l7a_A 253 LADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVYRYFGHEY----IPAFQTEKLAFFKQI 315 (318)
T ss_dssp HGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCSSC----CHHHHHHHHHHHHHH
T ss_pred HHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC-CeeEEEccCCCCCC----cchhHHHHHHHHHHH
Confidence 67788999999999999998 355667888875 38899999999983 345677777887654
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-22 Score=175.15 Aligned_cols=247 Identities=13% Similarity=0.039 Sum_probs=144.2
Q ss_pred cceeecCCc-eeEEEEcc---CC-CCCeEEEeCCCC---CChh--hhccccccchhhhhhccCCeEEEEeCCCCCCCCCC
Q 018947 22 DNLIKTSHG-SLSVTIYG---DQ-DKPALVTYPDLA---LNYM--SCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (348)
Q Consensus 22 ~~~v~~~~~-~l~~~~~g---~~-~~p~vvllHG~~---~~~~--~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 91 (348)
...+...++ .+.+..+. .. ..|+||++||.+ ++.. .|. .....+...||.|+++|+||+|.|+.
T Consensus 84 ~~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~------~~~~~la~~g~~vv~~d~r~~gg~~~ 157 (361)
T 1jkm_A 84 TETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHR------RWCTDLAAAGSVVVMVDFRNAWTAEG 157 (361)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHH------HHHHHHHHTTCEEEEEECCCSEETTE
T ss_pred eeeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchh------HHHHHHHhCCCEEEEEecCCCCCCCC
Confidence 334555444 66665542 22 348999999987 4433 221 22244555899999999999975542
Q ss_pred CCCCCCCCCCHHHH---HHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh-----CCCCcceEEEecCCCCCCCh-HHH
Q 018947 92 AISDDEPVLSVDDL---ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-----YRHRVLGLILVSPLCKAPSW-TEW 162 (348)
Q Consensus 92 ~~~~~~~~~~~~~~---~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~~~~~~-~~~ 162 (348)
.. .....+.|. .+++.+.++.++.++++++|||+||.+++.++.. +|++|+++|++++....... ...
T Consensus 158 ~~---~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~ 234 (361)
T 1jkm_A 158 HH---PFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHE 234 (361)
T ss_dssp EC---CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHH
T ss_pred CC---CCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccccc
Confidence 11 122334444 4444555556677799999999999999999998 88899999999987765211 100
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCC
Q 018947 163 LYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 242 (348)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 242 (348)
........ ... . ..... .......+...+............... ......+..+.
T Consensus 235 ~~~~~~~~--------------~~~-~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~l~~l~ 289 (361)
T 1jkm_A 235 RRLTELPS--------------LVE-N-DGYFI------ENGGMALLVRAYDPTGEHAEDPIAWPY---FASEDELRGLP 289 (361)
T ss_dssp HHHHHCTH--------------HHH-T-TTSSS------CHHHHHHHHHHHSSSSTTTTCTTTCGG---GCCHHHHTTCC
T ss_pred cccccCcc--------------hhh-c-cCccc------CHHHHHHHHHHhCCCCCCCCCcccCcc---ccChhhHcCCC
Confidence 00000000 000 0 00000 112222221111110000000000000 01133455666
Q ss_pred ccEEEEecCCCCCCchHHHHHHhhccC--CcEEEEecCCCCCcc-c-----cCh-hhhHHHHHHHHhhcc
Q 018947 243 CRSLIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVT-E-----EQP-HAMLIPMEYFLMGYG 303 (348)
Q Consensus 243 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~-~-----e~p-~~~~~~i~~fl~~~~ 303 (348)
|+|+++|++|.+++....+.+.+.+. .++++++++++|..+ . +++ +++.+.|.+||++..
T Consensus 290 -P~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 290 -PFVVAVNELDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp -CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred -ceEEEEcCcCcchhhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 99999999999987666777777653 369999999999887 3 344 788999999998764
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.4e-21 Score=163.03 Aligned_cols=214 Identities=10% Similarity=0.027 Sum_probs=130.5
Q ss_pred eeecCCceeEEEEcc---------CCCCCeEEEeCCC---CCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCC
Q 018947 24 LIKTSHGSLSVTIYG---------DQDKPALVTYPDL---ALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g---------~~~~p~vvllHG~---~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 91 (348)
.+..++..+.+..+- ....|+||++||. +++...| ...+..+.+.||.|+++|+||||.+..
T Consensus 8 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~------~~~~~~l~~~G~~v~~~d~~g~g~~~~ 81 (277)
T 3bxp_A 8 TLNTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREE------APIATRMMAAGMHTVVLNYQLIVGDQS 81 (277)
T ss_dssp EECSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTH------HHHHHHHHHTTCEEEEEECCCSTTTCC
T ss_pred EeccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccc------hHHHHHHHHCCCEEEEEecccCCCCCc
Confidence 344566665554442 2356799999993 3333222 223345667899999999999984321
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH---cC--CCceeEEEeChhHHHHHHHHHhC--------------CCCcceEEEecC
Q 018947 92 AISDDEPVLSVDDLADQIAEVLNH---FG--LGAVMCMGVTAGAYILTLFAMKY--------------RHRVLGLILVSP 152 (348)
Q Consensus 92 ~~~~~~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~--------------p~~v~~lvl~~~ 152 (348)
.....+++..+.+..+.+. ++ .++++++|||+||.+++.+|.++ +.+++++|+++|
T Consensus 82 -----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p 156 (277)
T 3bxp_A 82 -----VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYP 156 (277)
T ss_dssp -----CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESC
T ss_pred -----cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCC
Confidence 1223344444444433332 23 35899999999999999999985 778999999998
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHH-hhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCC
Q 018947 153 LCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK-RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR 231 (348)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (348)
........ ... .... .++. ....
T Consensus 157 ~~~~~~~~---------------~~~-----~~~~~~~~~------------------------------------~~~~ 180 (277)
T 3bxp_A 157 VIDLTAGF---------------PTT-----SAARNQITT------------------------------------DARL 180 (277)
T ss_dssp CCBTTSSS---------------SSS-----HHHHHHHCS------------------------------------CGGG
T ss_pred cccCCCCC---------------CCc-----cccchhccc------------------------------------hhhh
Confidence 76422110 000 0000 0100 0000
Q ss_pred ccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccC--CcEEEEecCCCCCccccC---------------hhhhH
Q 018947 232 PDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRR--YSALVEVQACGSMVTEEQ---------------PHAML 292 (348)
Q Consensus 232 ~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~---------------p~~~~ 292 (348)
.+....+.++.+|+|+++|++|.+++ ....+.+.+... .++++++++++|...... ++++.
T Consensus 181 ~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (277)
T 3bxp_A 181 WAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWP 260 (277)
T ss_dssp SBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHH
T ss_pred cCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHH
Confidence 12233355677899999999999984 556677777542 368999999999555443 47788
Q ss_pred HHHHHHHhhccc
Q 018947 293 IPMEYFLMGYGL 304 (348)
Q Consensus 293 ~~i~~fl~~~~~ 304 (348)
+.+.+||++.++
T Consensus 261 ~~~~~fl~~~~~ 272 (277)
T 3bxp_A 261 QLALRWLQEQGL 272 (277)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHhccc
Confidence 999999998764
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=172.15 Aligned_cols=221 Identities=13% Similarity=0.055 Sum_probs=133.8
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---- 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---- 115 (348)
..|+||++||.+........ ..|......+. ..||.|+++|+||++++.. ...++|..+.+..+.+.
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~-~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~-------~~~~~D~~~~~~~l~~~~~~~ 183 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANS-AIYDTLCRRLVGLCKCVVVSVNYRRAPENPY-------PCAYDDGWIALNWVNSRSWLK 183 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTB-HHHHHHHHHHHHHHTSEEEEECCCCTTTSCT-------THHHHHHHHHHHHHHTCGGGC
T ss_pred CceEEEEECCCcCcCCCCcc-hhHHHHHHHHHHHcCCEEEEecCCCCCCCCC-------chhHHHHHHHHHHHHhCchhh
Confidence 45789999996642211100 00112223444 4699999999999876531 23456666666666543
Q ss_pred --cCCC-ceeEEEeChhHHHHHHHHHhCCC---CcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Q 018947 116 --FGLG-AVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (348)
Q Consensus 116 --l~~~-~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (348)
++.+ +++++|||+||.+++.+|.++|+ +|+++|+++|.............. ......
T Consensus 184 ~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~------~~~~~~----------- 246 (351)
T 2zsh_A 184 SKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTESEKSL------DGKYFV----------- 246 (351)
T ss_dssp CTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHH------TTTSSC-----------
T ss_pred cCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCChhhhhc------CCCccc-----------
Confidence 3456 89999999999999999999998 899999999887643221111000 000000
Q ss_pred hcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCc-cEEEEecCCCCCCchHHHHHHhhcc
Q 018947 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-RSLIFVGESSPFHSEAVHMTSKIDR 268 (348)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvl~i~g~~D~~~~~~~~~~~~~~~ 268 (348)
.......+...+.......... ...........+.++++ |+|+++|++|.+++....+.+.+..
T Consensus 247 ------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~~ 311 (351)
T 2zsh_A 247 ------------TVRDRDWYWKAFLPEGEDREHP---ACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKK 311 (351)
T ss_dssp ------------CHHHHHHHHHHHSCTTCCTTST---TTCTTSTTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHhCCCCCCCCCc---ccCCCCCCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHHH
Confidence 0111111111000000000000 00000011234556676 9999999999988766666666653
Q ss_pred C--CcEEEEecCCCCCccc----cChhhhHHHHHHHHhh
Q 018947 269 R--YSALVEVQACGSMVTE----EQPHAMLIPMEYFLMG 301 (348)
Q Consensus 269 ~--~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~ 301 (348)
. .+++++++++||..+. ++++++.+.|.+||++
T Consensus 312 ~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 312 AGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp TTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 2 3899999999998887 7899999999999975
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.3e-22 Score=171.83 Aligned_cols=228 Identities=12% Similarity=0.121 Sum_probs=130.8
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH--- 115 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~--- 115 (348)
...|+||++||.+....+... ..|......+. ..||.|+++|+||+|.+.. ...+++..+.+..+.+.
T Consensus 81 ~~~p~vv~~HGgg~~~~~~~~-~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~-------~~~~~d~~~~~~~l~~~~~~ 152 (338)
T 2o7r_A 81 AKLPLVVYFHGGGFILFSAAS-TIFHDFCCEMAVHAGVVIASVDYRLAPEHRL-------PAAYDDAMEALQWIKDSRDE 152 (338)
T ss_dssp CCEEEEEEECCSTTTSCCTTB-HHHHHHHHHHHHHHTCEEEEEECCCTTTTCT-------THHHHHHHHHHHHHHTCCCH
T ss_pred CCceEEEEEcCCcCcCCCCCc-hhHHHHHHHHHHHCCcEEEEecCCCCCCCCC-------chHHHHHHHHHHHHHhCCcc
Confidence 345789999997743221110 00112234454 5799999999999876431 12345555445444432
Q ss_pred -----cCCCceeEEEeChhHHHHHHHHHhCCC--------CcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHH
Q 018947 116 -----FGLGAVMCMGVTAGAYILTLFAMKYRH--------RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (348)
Q Consensus 116 -----l~~~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (348)
++.++++|+|||+||.+++.+|.++|+ +|+++|+++|.............. ...........
T Consensus 153 ~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~ 227 (338)
T 2o7r_A 153 WLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRL-----ANDSRLPTFVL 227 (338)
T ss_dssp HHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHT-----TTCSSSCHHHH
T ss_pred hhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhcc-----CCCcccCHHHH
Confidence 344789999999999999999999988 899999999877643322111000 00000000000
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHH
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHM 262 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~ 262 (348)
..+...++....... ... ..+ ... . ......+.+..+.+|+|+++|++|.+++....+
T Consensus 228 ~~~~~~~~~~~~~~~----~~~-----------~~~--~~~----~-~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~ 285 (338)
T 2o7r_A 228 DLIWELSLPMGADRD----HEY-----------CNP--TAE----S-EPLYSFDKIRSLGWRVMVVGCHGDPMIDRQMEL 285 (338)
T ss_dssp HHHHHHHSCTTCCTT----STT-----------TCC--C---------CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHH
T ss_pred HHHHHHhCCCCCCCC----Ccc-----------cCC--CCC----C-cccccHhhhcCCCCCEEEEECCCCcchHHHHHH
Confidence 111111111000000 000 000 000 0 000011334556789999999999998655555
Q ss_pred HHhhccC--CcEEEEecCCCCCccccCh---hhhHHHHHHHHhhc
Q 018947 263 TSKIDRR--YSALVEVQACGSMVTEEQP---HAMLIPMEYFLMGY 302 (348)
Q Consensus 263 ~~~~~~~--~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~~ 302 (348)
.+.+... .+++++++++||..++++| +++.+.|.+||++.
T Consensus 286 ~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~ 330 (338)
T 2o7r_A 286 AERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDS 330 (338)
T ss_dssp HHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhh
Confidence 5555432 3789999999999888777 88999999999875
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-21 Score=180.32 Aligned_cols=230 Identities=10% Similarity=0.049 Sum_probs=150.6
Q ss_pred cceeec-CCceeEEEEccCC----CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC---CCCCCCCC
Q 018947 22 DNLIKT-SHGSLSVTIYGDQ----DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG---HEFGAAAI 93 (348)
Q Consensus 22 ~~~v~~-~~~~l~~~~~g~~----~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G---~G~S~~~~ 93 (348)
...+.. ++..+++..+.++ ..|+||++||.+.+.... .|......+.++||.|+++|+|| ||.+....
T Consensus 335 ~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~----~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~ 410 (582)
T 3o4h_A 335 LVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSD----SWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLK 410 (582)
T ss_dssp EEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCS----SCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred EEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCccccccc----ccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhh
Confidence 344555 5567877766432 568999999987663221 12344466778899999999999 66542211
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHH
Q 018947 94 -SDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (348)
Q Consensus 94 -~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (348)
........++++.+.+..+++....++++++|||+||.+++.+|.++|++++++|++++..... ...
T Consensus 411 ~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~---~~~--------- 478 (582)
T 3o4h_A 411 IIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWE---EMY--------- 478 (582)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHH---HHH---------
T ss_pred hhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHH---HHh---------
Confidence 1112234466666666666665444589999999999999999999999999999999855421 000
Q ss_pred HhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCC
Q 018947 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (348)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~ 252 (348)
.........+....++ . ..+. +.. .+....+.++++|+|+++|++
T Consensus 479 ---~~~~~~~~~~~~~~~~-~--------~~~~-------------------~~~----~sp~~~~~~i~~P~lii~G~~ 523 (582)
T 3o4h_A 479 ---ELSDAAFRNFIEQLTG-G--------SREI-------------------MRS----RSPINHVDRIKEPLALIHPQN 523 (582)
T ss_dssp ---HTCCHHHHHHHHHHTT-T--------CHHH-------------------HHH----TCGGGGGGGCCSCEEEEEETT
T ss_pred ---hcccchhHHHHHHHcC-c--------CHHH-------------------HHh----cCHHHHHhcCCCCEEEEecCC
Confidence 0000000011111111 0 1110 000 122344677899999999999
Q ss_pred CCCC--chHHHHHHhhccC--CcEEEEecCCCCCcc-ccChhhhHHHHHHHHhhc
Q 018947 253 SPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVT-EEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 253 D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 302 (348)
|..+ .....+.+.++.. ..++++++++||..+ .++++++.+.+.+||++.
T Consensus 524 D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 578 (582)
T 3o4h_A 524 ASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 578 (582)
T ss_dssp CSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 9998 4556677777652 378999999999987 578889999999999875
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=166.17 Aligned_cols=197 Identities=11% Similarity=0.087 Sum_probs=127.0
Q ss_pred CCCCeEEEeCCCC---CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH---HHHHHH
Q 018947 40 QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD---QIAEVL 113 (348)
Q Consensus 40 ~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~---dl~~~l 113 (348)
...|+|||+||.+ ++...| ...+..+...||.|+++|+||+|.+... ......+..+ .+.+..
T Consensus 48 ~~~p~vv~lHGgg~~~~~~~~~------~~~~~~l~~~G~~v~~~d~~g~~~~~~~-----~~~~~~d~~~~~~~l~~~~ 116 (283)
T 3bjr_A 48 TNLPAIIIVPGGSYTHIPVAQA------ESLAMAFAGHGYQAFYLEYTLLTDQQPL-----GLAPVLDLGRAVNLLRQHA 116 (283)
T ss_dssp CCEEEEEEECCSTTTCCCHHHH------HHHHHHHHTTTCEEEEEECCCTTTCSSC-----BTHHHHHHHHHHHHHHHSH
T ss_pred CCCcEEEEECCCccccCCcccc------HHHHHHHHhCCcEEEEEeccCCCccccC-----chhHHHHHHHHHHHHHHHH
Confidence 3567999999955 232222 1233455678999999999999886200 1122333332 233333
Q ss_pred HHcCC--CceeEEEeChhHHHHHHHHHhCCCC-------------cceEEEecCCCCCCChHHHHHHHHHHHHHHhhccc
Q 018947 114 NHFGL--GAVMCMGVTAGAYILTLFAMKYRHR-------------VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMC 178 (348)
Q Consensus 114 ~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~-------------v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (348)
+.+++ ++++++||||||.+++.+|.++|++ +++++++++...........
T Consensus 117 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~--------------- 181 (283)
T 3bjr_A 117 AEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPKD--------------- 181 (283)
T ss_dssp HHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC------------------
T ss_pred HHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccccccc---------------
Confidence 33344 4899999999999999999999987 99999998876532110000
Q ss_pred hhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc-
Q 018947 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS- 257 (348)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~- 257 (348)
......++. . ....+....+.++.+|+|+++|++|.+++
T Consensus 182 ----~~~~~~~~~--------------------~----------------~~~~~~~~~~~~~~~P~lii~G~~D~~~p~ 221 (283)
T 3bjr_A 182 ----DATLATWTP--------------------T----------------PNELAADQHVNSDNQPTFIWTTADDPIVPA 221 (283)
T ss_dssp ---------CCCC--------------------C----------------GGGGCGGGSCCTTCCCEEEEEESCCTTSCT
T ss_pred ----cchHHHHHH--------------------H----------------hHhcCHHHhccCCCCCEEEEEcCCCCCCCh
Confidence 000000000 0 00012233456778999999999999984
Q ss_pred -hHHHHHHhhccC--CcEEEEecCCCCCccccCh-------------hhhHHHHHHHHhhc
Q 018947 258 -EAVHMTSKIDRR--YSALVEVQACGSMVTEEQP-------------HAMLIPMEYFLMGY 302 (348)
Q Consensus 258 -~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p-------------~~~~~~i~~fl~~~ 302 (348)
....+.+.++.. ..++++++++||....+.+ +++.+.+.+||++.
T Consensus 222 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 222 TNTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 566777777653 3689999999997776654 78889999999764
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.8e-21 Score=164.04 Aligned_cols=233 Identities=17% Similarity=0.101 Sum_probs=140.2
Q ss_pred ccceeecCCceeEEEEcc---CCCCCeEEEeCCCC---CChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYG---DQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g---~~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~ 93 (348)
+...+...++.+.+..+- ....|+||++||.| ++...|. .....+.. .||.|+++|+||+|++..+
T Consensus 66 ~~~~i~~~~~~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~~~~------~~~~~La~~~g~~Vv~~Dyrg~~~~~~p- 138 (323)
T 3ain_A 66 EDITIPGSETNIKARVYYPKTQGPYGVLVYYHGGGFVLGDIESYD------PLCRAITNSCQCVTISVDYRLAPENKFP- 138 (323)
T ss_dssp EEEEEECSSSEEEEEEEECSSCSCCCEEEEECCSTTTSCCTTTTH------HHHHHHHHHHTSEEEEECCCCTTTSCTT-
T ss_pred EEEEecCCCCeEEEEEEecCCCCCCcEEEEECCCccccCChHHHH------HHHHHHHHhcCCEEEEecCCCCCCCCCc-
Confidence 344455556677666553 24568999999955 4443322 22234443 3999999999999986422
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH---c-CCCceeEEEeChhHHHHHHHHHhCCCCc---ceEEEecCCCCCCChHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNH---F-GLGAVMCMGVTAGAYILTLFAMKYRHRV---LGLILVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~---l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v---~~lvl~~~~~~~~~~~~~~~~~ 166 (348)
..+++..+.+..+.+. + +.++++++|||+||.+++.+|.++++++ +++|+++|............
T Consensus 139 ------~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-- 210 (323)
T 3ain_A 139 ------AAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLY-- 210 (323)
T ss_dssp ------HHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHH--
T ss_pred ------chHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHH--
Confidence 2345555555444443 3 5678999999999999999999988876 89999998776432211100
Q ss_pred HHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEE
Q 018947 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 246 (348)
. ....... .......+...+.......... .. ......+..+ .|++
T Consensus 211 ---~----~~~~~~l--------------------~~~~~~~~~~~~~~~~~~~~~~----~~--sp~~~~l~~l-~P~l 256 (323)
T 3ain_A 211 ---D----NGEGFFL--------------------TREHIDWFGQQYLRSFADLLDF----RF--SPILADLNDL-PPAL 256 (323)
T ss_dssp ---H----HSSSSSS--------------------CHHHHHHHHHHHCSSGGGGGCT----TT--CGGGSCCTTC-CCEE
T ss_pred ---H----hccCCCC--------------------CHHHHHHHHHHhCCCCcccCCc----cc--CcccCcccCC-CHHH
Confidence 0 0000000 1111111111111000000000 00 0011123333 3999
Q ss_pred EEecCCCCCCchHHHHHHhhccC--CcEEEEecCCCCCccc-----cChhhhHHHHHHHHhhc
Q 018947 247 IFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 247 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 302 (348)
+++|++|.+++....+++++... .++++++++++|..+. +.++++.+.+.+||++.
T Consensus 257 ii~G~~D~l~~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 319 (323)
T 3ain_A 257 IITAEHDPLRDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKV 319 (323)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCccHHHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHH
Confidence 99999999986666677766543 3789999999998776 44588999999999875
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1e-21 Score=169.24 Aligned_cols=235 Identities=17% Similarity=0.182 Sum_probs=141.7
Q ss_pred ccceeecCCceeEEEEc-cCCCCCeEEEeCCCC---CChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIY-GDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~-g~~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
+...+...++.+.+..+ +....|+||++||.+ ++...+. .....+. ..||.|+++|+||+|++..+
T Consensus 57 ~~~~i~~~~g~i~~~~y~~~~~~p~vv~~HGgg~~~g~~~~~~------~~~~~la~~~g~~Vv~~dyrg~g~~~~p--- 127 (311)
T 1jji_A 57 EDRTIKGRNGDIRVRVYQQKPDSPVLVYYHGGGFVICSIESHD------ALCRRIARLSNSTVVSVDYRLAPEHKFP--- 127 (311)
T ss_dssp EEEEEEETTEEEEEEEEESSSSEEEEEEECCSTTTSCCTGGGH------HHHHHHHHHHTSEEEEEECCCTTTSCTT---
T ss_pred EEEEecCCCCcEEEEEEcCCCCceEEEEECCcccccCChhHhH------HHHHHHHHHhCCEEEEecCCCCCCCCCC---
Confidence 44455556666665554 224568999999988 5544432 1223444 46999999999999988633
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCC--ceeEEEeChhHHHHHHHHHhCCCC----cceEEEecCCCCCCChHHHHHHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMS 169 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (348)
....+..+.++++.+.++.++++ +++++|||+||.+++.+|.+++++ ++++|+++|............
T Consensus 128 -~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~----- 201 (311)
T 1jji_A 128 -AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLL----- 201 (311)
T ss_dssp -HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHH-----
T ss_pred -CcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHH-----
Confidence 12234455556666666666765 899999999999999999988776 999999998876532211100
Q ss_pred HHHHhhccchh-HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEE
Q 018947 170 NLLYYYGMCGV-VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIF 248 (348)
Q Consensus 170 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i 248 (348)
. ...... . .......+.............. . . ......+..+ .|++++
T Consensus 202 ~----~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~----~-~-~p~~~~l~~~-~P~li~ 250 (311)
T 1jji_A 202 E----FGEGLWIL--------------------DQKIMSWFSEQYFSREEDKFNP----L-A-SVIFADLENL-PPALII 250 (311)
T ss_dssp H----TSSSCSSC--------------------CHHHHHHHHHHHCSSGGGGGCT----T-T-SGGGSCCTTC-CCEEEE
T ss_pred H----hcCCCccC--------------------CHHHHHHHHHHhCCCCccCCCc----c-c-CcccccccCC-ChheEE
Confidence 0 000000 0 1111111111111000000000 0 0 0011223333 499999
Q ss_pred ecCCCCCCchHHHHHHhhcc--CCcEEEEecCCCCCcccc-----ChhhhHHHHHHHHhh
Q 018947 249 VGESSPFHSEAVHMTSKIDR--RYSALVEVQACGSMVTEE-----QPHAMLIPMEYFLMG 301 (348)
Q Consensus 249 ~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-----~p~~~~~~i~~fl~~ 301 (348)
+|++|.+++....+++.+.. ..++++++++++|..+.. ..+++.+.+.+||++
T Consensus 251 ~G~~D~l~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 251 TAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred EcCcCcchHHHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 99999998655555555543 238999999999977653 347788888999875
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=179.74 Aligned_cols=227 Identities=10% Similarity=0.095 Sum_probs=144.5
Q ss_pred cceeec-CC-ceeEEEEccCC------CCCeEEEeCCCCCChh---hhccccccchhhhhhccCCeEEEEeCCCCCCCCC
Q 018947 22 DNLIKT-SH-GSLSVTIYGDQ------DKPALVTYPDLALNYM---SCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGA 90 (348)
Q Consensus 22 ~~~v~~-~~-~~l~~~~~g~~------~~p~vvllHG~~~~~~---~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 90 (348)
...+.+ ++ ..+++..+.++ ..|+||++||.+.+.. .|.... ...+..+...||.|+++|+||+|.+.
T Consensus 457 ~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~--~~~~~~la~~G~~v~~~d~rG~g~s~ 534 (706)
T 2z3z_A 457 TGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSV--GGWDIYMAQKGYAVFTVDSRGSANRG 534 (706)
T ss_dssp EEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC------CCHHHHHHHTTCEEEEECCTTCSSSC
T ss_pred EEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCc--hHHHHHHHhCCcEEEEEecCCCcccc
Confidence 334455 44 48888877532 2378999999766542 221110 01234555789999999999999875
Q ss_pred CCCCC-CCCCCCHHHHHHHHHHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHH
Q 018947 91 AAISD-DEPVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (348)
Q Consensus 91 ~~~~~-~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (348)
.+... ...... ....+|+.++++.+ +.++++++||||||++++.+|.++|++++++|++++........
T Consensus 535 ~~~~~~~~~~~~-~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~--- 610 (706)
T 2z3z_A 535 AAFEQVIHRRLG-QTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYA--- 610 (706)
T ss_dssp HHHHHTTTTCTT-HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSB---
T ss_pred hhHHHHHhhccC-CccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHH---
Confidence 42110 011111 12234444444433 34689999999999999999999999999999999876421100
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCc
Q 018947 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 243 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 243 (348)
......++..... ..+. +. . .+....+.++++
T Consensus 611 -------------------~~~~~~~~~~~~~------~~~~---~~----------------~----~~~~~~~~~i~~ 642 (706)
T 2z3z_A 611 -------------------IMYGERYFDAPQE------NPEG---YD----------------A----ANLLKRAGDLKG 642 (706)
T ss_dssp -------------------HHHHHHHHCCTTT------CHHH---HH----------------H----HCGGGGGGGCCS
T ss_pred -------------------hhhhhhhcCCccc------Chhh---hh----------------h----CCHhHhHHhCCC
Confidence 0011111111100 1111 10 0 123345678899
Q ss_pred cEEEEecCCCCCC--chHHHHHHhhcc--CCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 244 RSLIFVGESSPFH--SEAVHMTSKIDR--RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 244 Pvl~i~g~~D~~~--~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|+|+++|++|..+ .....+.+.++. ...++++++++||.++.++++++.+.|.+||++.
T Consensus 643 P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 643 RLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDH 705 (706)
T ss_dssp EEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHH
T ss_pred CEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 9999999999988 345567777654 2368999999999998888999999999999864
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-20 Score=160.62 Aligned_cols=232 Identities=12% Similarity=0.043 Sum_probs=144.2
Q ss_pred ccceeecCCceeEEEEccCCCCCe-EEEeCCCC---CChhhhccccccchhhhhhccC-CeEEEEeCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPA-LVTYPDLA---LNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~-vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~ 95 (348)
+...+..++..+ |...+...+++ ||++||.+ ++...+. .....++.. ||.|+++|+|+++.+.
T Consensus 59 ~~~~~~~~g~~~-~~p~~~~~~~~~vv~~HGgg~~~g~~~~~~------~~~~~la~~~g~~v~~~dyr~~~~~~----- 126 (322)
T 3k6k_A 59 ELTLTDLGGVPC-IRQATDGAGAAHILYFHGGGYISGSPSTHL------VLTTQLAKQSSATLWSLDYRLAPENP----- 126 (322)
T ss_dssp EEEEEEETTEEE-EEEECTTCCSCEEEEECCSTTTSCCHHHHH------HHHHHHHHHHTCEEEEECCCCTTTSC-----
T ss_pred eEEEEEECCEeE-EecCCCCCCCeEEEEEcCCcccCCChHHHH------HHHHHHHHhcCCEEEEeeCCCCCCCC-----
Confidence 344455577677 66556555667 99999966 4433322 222445443 9999999999987653
Q ss_pred CCCCCCHHHHHHHHHHHHHH-cCCCceeEEEeChhHHHHHHHHHhCCCC----cceEEEecCCCCCCChHHHHHHHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVLNH-FGLGAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMSN 170 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (348)
....++|..+.+..+++. ++.++++|+|||+||.+++.+|.+++++ ++++|+++|..............
T Consensus 127 --~~~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~---- 200 (322)
T 3k6k_A 127 --FPAAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNL---- 200 (322)
T ss_dssp --TTHHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHT----
T ss_pred --CchHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhc----
Confidence 224567777777777666 5667999999999999999999988776 99999999987654321111000
Q ss_pred HHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEec
Q 018947 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 250 (348)
....... .......+...+........ . ........+ ....|+|+++|
T Consensus 201 ----~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~-~------~~sp~~~~~-~~~pP~li~~G 248 (322)
T 3k6k_A 201 ----ADRDFLA--------------------EPDTLGEMSELYVGGEDRKN-P------LISPVYADL-SGLPEMLIHVG 248 (322)
T ss_dssp ----GGGCSSS--------------------CHHHHHHHHHHHHTTSCTTC-T------TTCGGGSCC-TTCCCEEEEEE
T ss_pred ----cCCCCcC--------------------CHHHHHHHHHHhcCCCCCCC-C------cCCcccccc-cCCCcEEEEEC
Confidence 0000000 11111111111110000000 0 000011111 22369999999
Q ss_pred CCCCCCchHHHHHHhhccC--CcEEEEecCCCCCccc-----cChhhhHHHHHHHHhhc
Q 018947 251 ESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 251 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 302 (348)
++|.+++....+++.+... .++++++++++|..+. +.++++.+.+.+||++.
T Consensus 249 ~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (322)
T 3k6k_A 249 SEEALLSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISAR 307 (322)
T ss_dssp SSCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTT
T ss_pred CcCccHHHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHH
Confidence 9999876666777776653 3699999999997654 44678999999999886
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=158.25 Aligned_cols=169 Identities=11% Similarity=-0.001 Sum_probs=122.9
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH------
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN------ 114 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~------ 114 (348)
..|+|||+||++++...|. ..+..+..+||.|+++|+||.+. ...+....+.+.+...
T Consensus 48 ~~p~vv~~HG~~~~~~~~~------~~~~~l~~~G~~v~~~d~~~s~~----------~~~~~~~~~~l~~~~~~~~~~~ 111 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYA------GLLSHWASHGFVVAAAETSNAGT----------GREMLACLDYLVRENDTPYGTY 111 (258)
T ss_dssp CEEEEEEECCTTCCGGGGH------HHHHHHHHHTCEEEEECCSCCTT----------SHHHHHHHHHHHHHHHSSSSTT
T ss_pred CceEEEEECCCCCCchhHH------HHHHHHHhCCeEEEEecCCCCcc----------HHHHHHHHHHHHhccccccccc
Confidence 5588999999998775432 23345556799999999996421 1233444444444433
Q ss_pred --HcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcc
Q 018947 115 --HFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSK 192 (348)
Q Consensus 115 --~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (348)
.++.++++++||||||.+++.+| .+.+|++++++++....
T Consensus 112 ~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~------------------------------------ 153 (258)
T 2fx5_A 112 SGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG------------------------------------ 153 (258)
T ss_dssp TTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS------------------------------------
T ss_pred ccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc------------------------------------
Confidence 44557899999999999999887 56789999998763220
Q ss_pred cccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCch---HHHHHHhhccC
Q 018947 193 EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSE---AVHMTSKIDRR 269 (348)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~---~~~~~~~~~~~ 269 (348)
. ......+.++++|+|+++|++|.+++. ...+.+.. +.
T Consensus 154 -~-------------------------------------~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~ 194 (258)
T 2fx5_A 154 -L-------------------------------------GHDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA-NV 194 (258)
T ss_dssp -T-------------------------------------TCCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC-SS
T ss_pred -c-------------------------------------ccchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhcc-CC
Confidence 0 000113457889999999999998842 45566653 33
Q ss_pred CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 270 YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 270 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
..++++++++||+.+.++++++.+.+.+||+..
T Consensus 195 ~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~ 227 (258)
T 2fx5_A 195 PVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQ 227 (258)
T ss_dssp CEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHH
T ss_pred CeEEEEECCCCCccccchHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999854
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-20 Score=167.45 Aligned_cols=235 Identities=13% Similarity=0.092 Sum_probs=143.4
Q ss_pred ceeecCCceeEEEEcc---CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
..+.++++.+....+. +...|+||++||.+++...+ .+..+.++||.|+++|+||+|.+... ...
T Consensus 136 ~~~~~~~~~l~~~l~~P~~~~~~P~Vv~~hG~~~~~~~~--------~a~~La~~Gy~V~a~D~rG~g~~~~~----~~~ 203 (422)
T 3k2i_A 136 WRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEY--------RASLLAGHGFATLALAYYNFEDLPNN----MDN 203 (422)
T ss_dssp EEEEEEETTEEEEEEECSSSCCBCEEEEECCTTCSCCCH--------HHHHHHTTTCEEEEEECSSSTTSCSS----CSC
T ss_pred EEEEEeCCcEEEEEEcCCCCCCcCEEEEEcCCCcchhHH--------HHHHHHhCCCEEEEEccCCCCCCCCC----ccc
Confidence 3455556666655553 34568999999997763221 22456678999999999999977533 233
Q ss_pred CCHHHHHHHHHHHHHHcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 100 LSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
..++++.+.+..+.+..+ .++++++||||||.+++.+|.++|+ |+++|++++........ +.. .....
T Consensus 204 ~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~-~~~--------~~~~~ 273 (422)
T 3k2i_A 204 ISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTA-INY--------KHSSI 273 (422)
T ss_dssp EETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSC-EEE--------TTEEE
T ss_pred CCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCc-hhh--------cCCcC
Confidence 567777777766665543 4799999999999999999999998 99999998876432100 000 00000
Q ss_pred chhHHHHHHHhh-hcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC
Q 018947 178 CGVVKELLLKRY-FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH 256 (348)
Q Consensus 178 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~ 256 (348)
.... . ..... +.... ..... ..+. ..... ...+....+.++++|+|+|+|++|.++
T Consensus 274 ~~~~-~-~~~~~~~~~~~-------~~~~~----~~~~-~~~~~---------~~~~~~~~~~~i~~P~Lii~G~~D~~v 330 (422)
T 3k2i_A 274 PPLG-Y-DLRRIKVAFSG-------LVDIV----DIRN-ALVGG---------YKNPSMIPIEKAQGPILLIVGQDDHNW 330 (422)
T ss_dssp CCCC-B-CGGGCEECTTS-------CEECT----TCBC-CCTTG---------GGSTTBCCGGGCCSCEEEEEETTCSSS
T ss_pred CCcc-c-chhhcccCcch-------hHHHH----HHHh-hhhhc---------ccccccccHHHCCCCEEEEEeCCCCCC
Confidence 0000 0 00000 00000 00000 0000 00000 001112235778999999999999998
Q ss_pred chH---HHHHHhhccC---CcEEEEecCCCCCc----------------------------cccChhhhHHHHHHHHhhc
Q 018947 257 SEA---VHMTSKIDRR---YSALVEVQACGSMV----------------------------TEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 257 ~~~---~~~~~~~~~~---~~~~~~~~~~gH~~----------------------------~~e~p~~~~~~i~~fl~~~ 302 (348)
+.. +.+.+.+... +.++++++++||.+ +.+.++++.+.+.+||++.
T Consensus 331 p~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~ 410 (422)
T 3k2i_A 331 RSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKH 410 (422)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 433 4566655542 27899999999987 2355778899999999886
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=157.87 Aligned_cols=213 Identities=13% Similarity=0.069 Sum_probs=139.1
Q ss_pred ecCCceeEEEEccC------CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 26 KTSHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 26 ~~~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
..++.++.++...+ ...|+||++||.+...... ..+...+..+.+.||.|+++|+||+|.|...
T Consensus 21 ~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~------- 90 (276)
T 3hxk_A 21 LNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQ---RESDPLALAFLAQGYQVLLLNYTVMNKGTNY------- 90 (276)
T ss_dssp CBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCG---GGSHHHHHHHHHTTCEEEEEECCCTTSCCCS-------
T ss_pred CCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCc---hhhHHHHHHHHHCCCEEEEecCccCCCcCCC-------
Confidence 33566777665543 3468999999954221111 1122334566678999999999999987521
Q ss_pred CCHHHHHHHHHHHHHH---------cCCCceeEEEeChhHHHHHHHHHh-CCCCcceEEEecCCCCCCChHHHHHHHHHH
Q 018947 100 LSVDDLADQIAEVLNH---------FGLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~---------l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (348)
.......+|+.++++. ++.++++++|||+||.+++.+|.+ .+.+++++|+++|..........
T Consensus 91 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~------- 163 (276)
T 3hxk_A 91 NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPS------- 163 (276)
T ss_dssp CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSS-------
T ss_pred CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCc-------
Confidence 3344445554444432 234689999999999999999988 78999999999987653221000
Q ss_pred HHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEe
Q 018947 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 249 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~ 249 (348)
.... ..++ . ... ...+....+.++.+|+++++
T Consensus 164 ----~~~~---------~~~~-----~-----~~~-------------------------~~~~~~~~~~~~~~P~lii~ 195 (276)
T 3hxk_A 164 ----DLSH---------FNFE-----I-----ENI-------------------------SEYNISEKVTSSTPPTFIWH 195 (276)
T ss_dssp ----SSSS---------SCCC-----C-----SCC-------------------------GGGBTTTTCCTTSCCEEEEE
T ss_pred ----chhh---------hhcC-----c-----hhh-------------------------hhCChhhccccCCCCEEEEe
Confidence 0000 0000 0 000 00122233557789999999
Q ss_pred cCCCCCC--chHHHHHHhhccC--CcEEEEecCCCCCccccCh-------------hhhHHHHHHHHhhcc
Q 018947 250 GESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQP-------------HAMLIPMEYFLMGYG 303 (348)
Q Consensus 250 g~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p-------------~~~~~~i~~fl~~~~ 303 (348)
|++|.++ .....+.+.+... ..++++++++||......+ +++.+.+.+||++..
T Consensus 196 G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 196 TADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp ETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred cCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 9999998 4556677777653 2589999999997776555 678888999998874
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=152.24 Aligned_cols=171 Identities=10% Similarity=0.070 Sum_probs=118.6
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeC-------------CCCCCCCCCCCCCCCCCCCHHHHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHIN-------------PPGHEFGAAAISDDEPVLSVDDLA 106 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D-------------~~G~G~S~~~~~~~~~~~~~~~~~ 106 (348)
+..| |||+||++++...|.. . ...+..++.|+++| ++|+|.+.... .....+.+.+
T Consensus 15 ~~~p-vv~lHG~g~~~~~~~~------~-~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~---~~~~~~~~~~ 83 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEHQLVE------I-AEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKEN---FDLESLDEET 83 (209)
T ss_dssp TSCC-EEEECCTTCCTTTTHH------H-HHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGG---BCHHHHHHHH
T ss_pred CCCC-EEEEeCCCCCHHHHHH------H-HHhcCCCceEEEecCCcCCCCcccceecccccccccCC---CCHHHHHHHH
Confidence 4667 9999999988766432 2 34455899999999 77777643210 1122344444
Q ss_pred HHHHHHH----HHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchh
Q 018947 107 DQIAEVL----NHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (348)
Q Consensus 107 ~dl~~~l----~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (348)
+++.+++ +..++ ++++++||||||.+++.+|.++|++++++|++++.......
T Consensus 84 ~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~--------------------- 142 (209)
T 3og9_A 84 DWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE--------------------- 142 (209)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC---------------------
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc---------------------
Confidence 4554444 44455 78999999999999999999999999999999875431000
Q ss_pred HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--h
Q 018947 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--E 258 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~ 258 (348)
. .....++|+++++|++|++++ .
T Consensus 143 ---------------------~----------------------------------~~~~~~~p~li~~G~~D~~v~~~~ 167 (209)
T 3og9_A 143 ---------------------Q----------------------------------TVQLDDKHVFLSYAPNDMIVPQKN 167 (209)
T ss_dssp ---------------------C----------------------------------CCCCTTCEEEEEECTTCSSSCHHH
T ss_pred ---------------------c----------------------------------cccccCCCEEEEcCCCCCccCHHH
Confidence 0 012356899999999999994 5
Q ss_pred HHHHHHhhccCC--cEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 259 AVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 259 ~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.+.+.+...+ .++++++ +||.... +..+.+.+||++.
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~~-~gH~~~~----~~~~~~~~~l~~~ 208 (209)
T 3og9_A 168 FGDLKGDLEDSGCQLEIYESS-LGHQLTQ----EEVLAAKKWLTET 208 (209)
T ss_dssp HHHHHHHHHHTTCEEEEEECS-STTSCCH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCceEEEEcC-CCCcCCH----HHHHHHHHHHHhh
Confidence 566777776543 5677776 8997743 3456677888754
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=178.46 Aligned_cols=230 Identities=11% Similarity=0.077 Sum_probs=149.1
Q ss_pred ccceeec-CC-ceeEEEEccCC------CCCeEEEeCCCCCChh---hhccccccchhhhhhccCCeEEEEeCCCCCCCC
Q 018947 21 KDNLIKT-SH-GSLSVTIYGDQ------DKPALVTYPDLALNYM---SCFQGLFFCPEACSLLLHNFCIYHINPPGHEFG 89 (348)
Q Consensus 21 ~~~~v~~-~~-~~l~~~~~g~~------~~p~vvllHG~~~~~~---~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S 89 (348)
+...+.+ +| .++++..+.+. ..|+||++||.+.+.. .|.... .......+.+.||.|+++|+||+|.|
T Consensus 488 ~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~g~s 566 (741)
T 2ecf_A 488 EFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRG-DHLFNQYLAQQGYVVFSLDNRGTPRR 566 (741)
T ss_dssp EEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSH-HHHHHHHHHHTTCEEEEECCTTCSSS
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccc-hhHHHHHHHhCCCEEEEEecCCCCCC
Confidence 3344555 55 58888887543 2478999999887642 121100 00123455678999999999999987
Q ss_pred CCCCCC----CCCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHH
Q 018947 90 AAAISD----DEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWL 163 (348)
Q Consensus 90 ~~~~~~----~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 163 (348)
..+... ......++++.+.+..+.+. ++.++++++||||||.+++.+|.++|++++++|++++.........
T Consensus 567 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-- 644 (741)
T 2ecf_A 567 GRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDS-- 644 (741)
T ss_dssp CHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSBH--
T ss_pred ChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhcc--
Confidence 532110 01112345555555555443 2346899999999999999999999999999999998765311000
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCc
Q 018947 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 243 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 243 (348)
.+...++... ....+.+ .. .+....+.++++
T Consensus 645 --------------------~~~~~~~~~~---------~~~~~~~----------------~~----~~~~~~~~~i~~ 675 (741)
T 2ecf_A 645 --------------------HYTERYMDLP---------ARNDAGY----------------RE----ARVLTHIEGLRS 675 (741)
T ss_dssp --------------------HHHHHHHCCT---------GGGHHHH----------------HH----HCSGGGGGGCCS
T ss_pred --------------------ccchhhcCCc---------ccChhhh----------------hh----cCHHHHHhhCCC
Confidence 0011111110 0000111 00 122344678889
Q ss_pred cEEEEecCCCCCC--chHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 244 RSLIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 244 Pvl~i~g~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|+|+++|++|..+ .....+.+.++.. ..++++++++||..+.+.++++.+.|.+||++.
T Consensus 676 P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 738 (741)
T 2ecf_A 676 PLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRC 738 (741)
T ss_dssp CEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHHh
Confidence 9999999999988 3556677777653 258999999999999888899999999999875
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-19 Score=157.15 Aligned_cols=219 Identities=12% Similarity=0.090 Sum_probs=140.2
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-CC
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-GL 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-~~ 118 (348)
..+++|+|+||++++...|.. + ...+..+|+|+++|+||+|.+.. ...+++++++++.+.+..+ +.
T Consensus 99 g~~~~l~~lhg~~~~~~~~~~-l------~~~L~~~~~v~~~d~~g~~~~~~------~~~~~~~~a~~~~~~i~~~~~~ 165 (329)
T 3tej_A 99 GNGPTLFCFHPASGFAWQFSV-L------SRYLDPQWSIIGIQSPRPNGPMQ------TAANLDEVCEAHLATLLEQQPH 165 (329)
T ss_dssp CSSCEEEEECCTTSCCGGGGG-G------GGTSCTTCEEEEECCCTTTSHHH------HCSSHHHHHHHHHHHHHHHCSS
T ss_pred CCCCcEEEEeCCcccchHHHH-H------HHhcCCCCeEEEeeCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCC
Confidence 367899999999998765432 2 35567899999999999987652 2358999999988877765 55
Q ss_pred CceeEEEeChhHHHHHHHHHh---CCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHH---HHHHhhhcc
Q 018947 119 GAVMCMGVTAGAYILTLFAMK---YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE---LLLKRYFSK 192 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 192 (348)
++++|+||||||.+++.+|.+ +|++|.+++++++...... .+. ... .......... .....++..
T Consensus 166 ~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~--~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~ 236 (329)
T 3tej_A 166 GPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQ--NWQ--EKE-----ANGLDPEVLAEINREREAFLAA 236 (329)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHH--HTC------------CCCCTHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCcc--ccc--ccc-----ccccChhhHHHHHHHHHHHHHh
Confidence 799999999999999999998 9999999999998764210 000 000 0000000000 000111111
Q ss_pred cccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCC
Q 018947 193 EVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRY 270 (348)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~ 270 (348)
.... ......+.+... +......+..+ ....+++|++++.|++|... +....+.+..++
T Consensus 237 ~~~~----~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~-- 297 (329)
T 3tej_A 237 QQGS----TSTELFTTIEGN--------YADAVRLLTTA-----HSVPFDGKATLFVAERTLQEGMSPERAWSPWIAE-- 297 (329)
T ss_dssp TCCC----SCCHHHHHHHHH--------HHHHHHHHTTC-----CCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEE--
T ss_pred cccc----ccHHHHHHHHHH--------HHHHHHHHhcC-----CCCCcCCCeEEEEeccCCCCCCCchhhHHHhcCC--
Confidence 1000 022222222211 11111111111 13467899999999999876 333445555655
Q ss_pred cEEEEecCCCCCccccCh--hhhHHHHHHHHh
Q 018947 271 SALVEVQACGSMVTEEQP--HAMLIPMEYFLM 300 (348)
Q Consensus 271 ~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~ 300 (348)
.+++.++ +||+.+++.| +.+++.|.+||+
T Consensus 298 ~~~~~v~-g~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 298 LDIYRQD-CAHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp EEEEEES-SCGGGGGSTTTHHHHHHHHHHHHC
T ss_pred cEEEEec-CChHHhCCChHHHHHHHHHHHHhc
Confidence 8889997 9999888877 789999999985
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-21 Score=173.07 Aligned_cols=236 Identities=12% Similarity=0.075 Sum_probs=142.5
Q ss_pred ceeecCCceeEEEEcc---CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
..+.++++.+....+- +...|+||++||.+++...+ .+..+.++||.|+++|+||+|.+... ...
T Consensus 152 ~~~~~~~g~l~~~l~~P~~~~~~P~Vv~lhG~~~~~~~~--------~a~~La~~Gy~Vla~D~rG~~~~~~~----~~~ 219 (446)
T 3hlk_A 152 RREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEY--------RASLLAGKGFAVMALAYYNYEDLPKT----MET 219 (446)
T ss_dssp EEEEEEETTEEEEEEECSSSCCBCEEEEECCSSCSCCCH--------HHHHHHTTTCEEEEECCSSSTTSCSC----CSE
T ss_pred EEEEecCCeEEEEEEeCCCCCCCCEEEEECCCCcchhhH--------HHHHHHhCCCEEEEeccCCCCCCCcc----hhh
Confidence 3445555566655443 34568999999998763322 12456678999999999999887533 223
Q ss_pred CCHHHHHHHHHHHHHHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 100 LSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
..++++.+.+..+.+..++ ++++++||||||.+++.+|.++|+ |+++|++++........... .....
T Consensus 220 ~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~---------~~~~~ 289 (446)
T 3hlk_A 220 LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRY---------KGETL 289 (446)
T ss_dssp EEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEE---------TTEEE
T ss_pred CCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccc---------cCccC
Confidence 5677777777766665443 789999999999999999999998 99999998876432110000 00000
Q ss_pred chhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc
Q 018947 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS 257 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~ 257 (348)
...... .......... .... ...+. ..... ...+....+.++++|+|+++|++|.+++
T Consensus 290 ~~~~~~-~~~~~~~~~~-------~~~~----~~~~~--~~~~~--------~~~~~~~~~~~i~~PvLii~G~~D~~vp 347 (446)
T 3hlk_A 290 PPVGVN-RNRIKVTKDG-------YADI----VDVLN--SPLEG--------PDQKSFIPVERAESTFLFLVGQDDHNWK 347 (446)
T ss_dssp CCCCBC-GGGCEECSSS-------CEEC----TTCBC--CTTSG--------GGGGGBCCGGGCCSEEEEEEETTCCSSC
T ss_pred Cccccc-hhccccccch-------HHHH----HHHHh--chhhc--------cccccccCHHHCCCCEEEEEeCCCCCcC
Confidence 000000 0000000000 0000 00000 00000 0001112366789999999999999985
Q ss_pred h---HHHHHHhhcc---CCcEEEEecCCCCCcc----------------------------ccChhhhHHHHHHHHhhc
Q 018947 258 E---AVHMTSKIDR---RYSALVEVQACGSMVT----------------------------EEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 258 ~---~~~~~~~~~~---~~~~~~~~~~~gH~~~----------------------------~e~p~~~~~~i~~fl~~~ 302 (348)
. ...+.+.+.. +++++++++++||.+. .+.++++.+.+.+||++.
T Consensus 348 ~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~ 426 (446)
T 3hlk_A 348 SEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKH 426 (446)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 4 3456666553 2278999999999872 233677889999999886
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=150.28 Aligned_cols=181 Identities=10% Similarity=0.082 Sum_probs=125.4
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhh-----ccCCeEEEEeCCCCCCCCCC--------------CCCCCCCCC
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSL-----LLHNFCIYHINPPGHEFGAA--------------AISDDEPVL 100 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~-----~~~g~~vi~~D~~G~G~S~~--------------~~~~~~~~~ 100 (348)
+..|+|||+||++++...|.... ..+ ...+++|+++|.|+++.+.. .........
T Consensus 21 ~~~p~vv~lHG~g~~~~~~~~~~------~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 94 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQGLRMWI------KQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLE 94 (239)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHH------HHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHH
T ss_pred CCCcEEEEEecCCCchhhHHHHH------HHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchh
Confidence 56789999999999987653212 222 23579999988875321100 001112235
Q ss_pred CHHHHHHHHHHHHHH-----cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhh
Q 018947 101 SVDDLADQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (348)
+++++++++..+++. ++.++++|+||||||.+++.+|.++|++++++|++++..........
T Consensus 95 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~------------- 161 (239)
T 3u0v_A 95 SIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQ------------- 161 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHHH-------------
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHHH-------------
Confidence 788888899998876 35679999999999999999999999999999999987653221100
Q ss_pred ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCcc-EEEEecCCCC
Q 018947 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-SLIFVGESSP 254 (348)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl~i~g~~D~ 254 (348)
.. . .....+| +++++|++|.
T Consensus 162 --------------------------------~~----------------~-----------~~~~~~pp~li~~G~~D~ 182 (239)
T 3u0v_A 162 --------------------------------AL----------------Q-----------KSNGVLPELFQCHGTADE 182 (239)
T ss_dssp --------------------------------HH----------------H-----------HCCSCCCCEEEEEETTCS
T ss_pred --------------------------------HH----------------H-----------hhccCCCCEEEEeeCCCC
Confidence 00 0 1123566 9999999999
Q ss_pred CCc--hHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 255 FHS--EAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 255 ~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+++ ....+.+.+... ..++++++++||.... +..+.+.+||++.
T Consensus 183 ~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~~ 230 (239)
T 3u0v_A 183 LVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSK----TELDILKLWILTK 230 (239)
T ss_dssp SSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCH----HHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCH----HHHHHHHHHHHHh
Confidence 984 355677776632 3889999999998873 4455666777664
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-20 Score=161.22 Aligned_cols=237 Identities=11% Similarity=0.006 Sum_probs=136.0
Q ss_pred ccceeecCCc--eeEEEEcc----CCCCCeEEEeCCCC---CChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCC
Q 018947 21 KDNLIKTSHG--SLSVTIYG----DQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGA 90 (348)
Q Consensus 21 ~~~~v~~~~~--~l~~~~~g----~~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~ 90 (348)
++..+...++ .+.+..+. +...|+||++||.+ ++...+. .....+.. .||.|+++|+||+|++.
T Consensus 52 ~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~~~~------~~~~~la~~~G~~Vv~~d~rg~~~~~ 125 (323)
T 1lzl_A 52 RELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSD------PFCVEVARELGFAVANVEYRLAPETT 125 (323)
T ss_dssp EEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGGH------HHHHHHHHHHCCEEEEECCCCTTTSC
T ss_pred EEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChhhhH------HHHHHHHHhcCcEEEEecCCCCCCCC
Confidence 3444555444 56655542 23457999999987 4544332 22245555 49999999999999875
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHcCC--CceeEEEeChhHHHHHHHHHhCCC----CcceEEEecCCCCCCChHHHHH
Q 018947 91 AAISDDEPVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLY 164 (348)
Q Consensus 91 ~~~~~~~~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~ 164 (348)
.+ ....+..+.++++.+.++.+++ ++++++|||+||.+++.+|.++++ .++++++++|...........
T Consensus 126 ~~----~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~- 200 (323)
T 1lzl_A 126 FP----GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSM- 200 (323)
T ss_dssp TT----HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHH-
T ss_pred CC----chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchhH-
Confidence 32 1111223333334343445555 689999999999999999988765 499999999887643221110
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhch-----hhHHHHHHHHcCCccHHhhhc
Q 018947 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQS-----SNVWHFLEAINGRPDISEGLR 239 (348)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~ 239 (348)
. . .... ... .......+...+..... ....... . ......+.
T Consensus 201 -~---~---~~~~-~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----s-p~~~~~~~ 247 (323)
T 1lzl_A 201 -T---N---FVDT-PLW--------------------HRPNAILSWKYYLGESYSGPEDPDVSIYA----A-PSRATDLT 247 (323)
T ss_dssp -H---H---CSSC-SSC--------------------CHHHHHHHHHHHHCTTCCCTTCSCCCTTT----C-GGGCSCCT
T ss_pred -H---H---hccC-CCC--------------------CHHHHHHHHHHhCCCCcccccccCCCccc----C-cccCcccC
Confidence 0 0 0000 000 11111111111100000 0000000 0 00000111
Q ss_pred cCCccEEEEecCCCCCCchHHHHHHhhccC--CcEEEEecCCCCCccc----cChhhhHHHHHHHHhhc
Q 018947 240 KLQCRSLIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE----EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 240 ~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~~ 302 (348)
. .+|+++++|++|.+++....+++.+... .++++++++++|.... +.++++.+.+.+||++.
T Consensus 248 ~-~~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 315 (323)
T 1lzl_A 248 G-LPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRG 315 (323)
T ss_dssp T-CCCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHH
T ss_pred C-CChhheEECCcCCchHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHH
Confidence 1 2699999999999886666666666542 3799999999997543 33678999999999886
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.3e-21 Score=163.44 Aligned_cols=234 Identities=12% Similarity=0.083 Sum_probs=137.2
Q ss_pred ccceeecCCceeEEEEccC----CCCCeEEEeCC---CCCChhhhccccccchhhhhhccC-CeEEEEeCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGD----QDKPALVTYPD---LALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAA 92 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~----~~~p~vvllHG---~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~ 92 (348)
+...+...++.+.+..+.+ ...|+||++|| ++++...|. .....+..+ ||.|+++|+||+|.+..+
T Consensus 49 ~~~~i~~~~g~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~~~------~~~~~la~~~g~~v~~~d~rg~~~~~~~ 122 (310)
T 2hm7_A 49 REFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHD------PVCRVLAKDGRAVVFSVDYRLAPEHKFP 122 (310)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTH------HHHHHHHHHHTSEEEEECCCCTTTSCTT
T ss_pred EEEEeccCCCeEEEEEEecCCCCCCCCEEEEECCCccccCChhHhH------HHHHHHHHhcCCEEEEeCCCCCCCCCCC
Confidence 4455666667887776643 24579999999 555544332 233445554 999999999999876421
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH---HcC--CCceeEEEeChhHHHHHHHHHhCCC----CcceEEEecCCCCCC--ChHH
Q 018947 93 ISDDEPVLSVDDLADQIAEVLN---HFG--LGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAP--SWTE 161 (348)
Q Consensus 93 ~~~~~~~~~~~~~~~dl~~~l~---~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~--~~~~ 161 (348)
...++..+.+..+.+ .++ .++++++|||+||.+++.+|.++|+ +|+++|++++..... ....
T Consensus 123 -------~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~ 195 (310)
T 2hm7_A 123 -------AAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPA 195 (310)
T ss_dssp -------HHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCCH
T ss_pred -------ccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCCc
Confidence 123333333332322 223 3689999999999999999998876 699999999887653 1110
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccC
Q 018947 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL 241 (348)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 241 (348)
.. .. ....... .......+...+.......... ... ......+..+
T Consensus 196 ~~-----~~----~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~----~~~-p~~~~~l~~~ 241 (310)
T 2hm7_A 196 SI-----EE----NAEGYLL--------------------TGGMMLWFRDQYLNSLEELTHP----WFS-PVLYPDLSGL 241 (310)
T ss_dssp HH-----HH----TSSSSSS--------------------CHHHHHHHHHHHCSSGGGGGCT----TTC-GGGCSCCTTC
T ss_pred ch-----hh----cCCCCCC--------------------CHHHHHHHHHHhCCCCCccCCc----cCC-CCcCccccCC
Confidence 00 00 0000000 1111111111111000000000 000 0001123333
Q ss_pred CccEEEEecCCCCCCchHHHHHHhhccC--CcEEEEecCCCCCccc-----cChhhhHHHHHHHHhhc
Q 018947 242 QCRSLIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 242 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 302 (348)
.|+++++|++|.+++....+++.+... .+++++++++||.... ++++++.+.+.+||++.
T Consensus 242 -~P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 308 (310)
T 2hm7_A 242 -PPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 308 (310)
T ss_dssp -CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEecCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHH
Confidence 399999999999886566677766543 3789999999996543 56688999999999764
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-19 Score=151.77 Aligned_cols=99 Identities=14% Similarity=0.108 Sum_probs=80.4
Q ss_pred cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q 018947 38 GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG 117 (348)
Q Consensus 38 g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~ 117 (348)
+...+++|||+||++++...|.. . ...+. ++|+++|+++. ...++++++++++.++++.+.
T Consensus 20 ~~~~~~~l~~~hg~~~~~~~~~~------~-~~~L~--~~v~~~d~~~~----------~~~~~~~~~a~~~~~~i~~~~ 80 (283)
T 3tjm_A 20 VQSSERPLFLVHPIEGSTTVFHS------L-ASRLS--IPTYGLQCTRA----------APLDSIHSLAAYYIDCIRQVQ 80 (283)
T ss_dssp CCSSSCCEEEECCTTCCSGGGHH------H-HHHCS--SCEEEECCCTT----------SCCSCHHHHHHHHHHHHTTTC
T ss_pred CCCCCCeEEEECCCCCCHHHHHH------H-HHhcC--ceEEEEecCCC----------CCCCCHHHHHHHHHHHHHHhC
Confidence 33467889999999998866432 1 34444 99999999753 124799999999999999886
Q ss_pred C-CceeEEEeChhHHHHHHHHHhC---CCCcc---eEEEecCCCC
Q 018947 118 L-GAVMCMGVTAGAYILTLFAMKY---RHRVL---GLILVSPLCK 155 (348)
Q Consensus 118 ~-~~v~lvGhS~Gg~ia~~~a~~~---p~~v~---~lvl~~~~~~ 155 (348)
. ++++++||||||.+|+++|.+. |++|. +++++++.+.
T Consensus 81 ~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 81 PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT 125 (283)
T ss_dssp CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTT
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCch
Confidence 5 7899999999999999999866 88899 9999998654
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-20 Score=152.43 Aligned_cols=186 Identities=12% Similarity=0.082 Sum_probs=127.5
Q ss_pred CCceeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCC---CCCCCCC--CCCCCC
Q 018947 28 SHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE---FGAAAIS--DDEPVL 100 (348)
Q Consensus 28 ~~~~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G---~S~~~~~--~~~~~~ 100 (348)
++..++|....+ +.+|+|||+||++++...|.. . ...+.++|.|+++|.+++. .+..... ......
T Consensus 14 ~~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~------~-~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~ 86 (223)
T 3b5e_A 14 TDLAFPYRLLGAGKESRECLFLLHGSGVDETTLVP------L-ARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQK 86 (223)
T ss_dssp CSSSSCEEEESTTSSCCCEEEEECCTTBCTTTTHH------H-HHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHH
T ss_pred cCCCceEEEeCCCCCCCCEEEEEecCCCCHHHHHH------H-HHhcCCCceEEEeCCCCCcCCccccccccCCCcccHH
Confidence 455677776643 356899999999988765432 1 3444569999999988742 1110000 001123
Q ss_pred CHHHHHHHHHHHHHHc----CC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 101 SVDDLADQIAEVLNHF----GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
++.+.++++.++++.+ ++ ++++++|||+||.+++.+|.++|++++++|++++......
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---------------- 150 (223)
T 3b5e_A 87 SILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH---------------- 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS----------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc----------------
Confidence 4555666666666543 43 7899999999999999999999999999999988654210
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
. .....+++|+++++|++|.
T Consensus 151 ---------------------------~---------------------------------~~~~~~~~P~li~~G~~D~ 170 (223)
T 3b5e_A 151 ---------------------------V---------------------------------PATDLAGIRTLIIAGAADE 170 (223)
T ss_dssp ---------------------------C---------------------------------CCCCCTTCEEEEEEETTCT
T ss_pred ---------------------------c---------------------------------ccccccCCCEEEEeCCCCC
Confidence 0 0012357899999999999
Q ss_pred CC--chHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 255 FH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 255 ~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++ .... +.+.+... ..++++++ +||....+. .+.+.+||++.
T Consensus 171 ~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~----~~~i~~~l~~~ 216 (223)
T 3b5e_A 171 TYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDPD----AAIVRQWLAGP 216 (223)
T ss_dssp TTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHHH----HHHHHHHHHCC
T ss_pred cCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHHH----HHHHHHHHHhh
Confidence 98 4455 77777642 27899999 999886443 35778888764
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.83 E-value=9.4e-20 Score=173.00 Aligned_cols=232 Identities=10% Similarity=0.050 Sum_probs=152.6
Q ss_pred ceeec-CCceeEEEEccC----------CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC---CCC
Q 018947 23 NLIKT-SHGSLSVTIYGD----------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG---HEF 88 (348)
Q Consensus 23 ~~v~~-~~~~l~~~~~g~----------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G---~G~ 88 (348)
..+.. ++.++++..+.+ ...|+||++||.+.+.... .|......+..+||.|+++|+|| ||.
T Consensus 394 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~----~~~~~~~~l~~~G~~v~~~d~rG~~~~G~ 469 (662)
T 3azo_A 394 RTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPA----VLDLDVAYFTSRGIGVADVNYGGSTGYGR 469 (662)
T ss_dssp EEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCC----SCCHHHHHHHTTTCEEEEEECTTCSSSCH
T ss_pred EEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcc----cchHHHHHHHhCCCEEEEECCCCCCCccH
Confidence 34444 566787776532 2358899999998765421 12233456667899999999999 776
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHH
Q 018947 89 GAAAIS-DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN 165 (348)
Q Consensus 89 S~~~~~-~~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 165 (348)
+..... .......++++.+.+..++++ ++.++++++|||+||.+++.++.. |++++++|++++..... ...
T Consensus 470 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~---~~~-- 543 (662)
T 3azo_A 470 AYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLL---GWA-- 543 (662)
T ss_dssp HHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHH---HHH--
T ss_pred HHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHH---HHh--
Confidence 532211 112235578888888888887 566799999999999999988876 99999999998865421 100
Q ss_pred HHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccE
Q 018947 166 KVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRS 245 (348)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 245 (348)
. ....... ..+...+++... +..+.+ .. .+....+.++++|+
T Consensus 544 -------~-~~~~~~~-~~~~~~~~~~~~---------~~~~~~----------------~~----~sp~~~~~~~~~P~ 585 (662)
T 3azo_A 544 -------D-GGTHDFE-SRYLDFLIGSFE---------EFPERY----------------RD----RAPLTRADRVRVPF 585 (662)
T ss_dssp -------T-TCSCGGG-TTHHHHHTCCTT---------TCHHHH----------------HH----TCGGGGGGGCCSCE
T ss_pred -------c-ccccchh-hHhHHHHhCCCc---------cchhHH----------------Hh----hChHhHhccCCCCE
Confidence 0 0000000 111111211100 000111 00 12334567888999
Q ss_pred EEEecCCCCCC--chHHHHHHhhccC--CcEEEEecCCCCCcc-ccChhhhHHHHHHHHhhc
Q 018947 246 LIFVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVT-EEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 246 l~i~g~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~~ 302 (348)
|+++|++|..+ .....+.+.++.. ..++++++++||... .++++++.+.+.+||++.
T Consensus 586 lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 647 (662)
T 3azo_A 586 LLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQV 647 (662)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 99999999998 4566788888763 258999999999764 367789999999999886
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=173.61 Aligned_cols=230 Identities=11% Similarity=0.091 Sum_probs=145.6
Q ss_pred cceeecCCceeEEEEccCC------CCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~------~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
...+...+.++++..+.++ ..|+||++||.+.+..... .+.......++ ..||.|+++|+||+|.+.....
T Consensus 470 ~~~~~~~~~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~--~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~ 547 (719)
T 1z68_A 470 IKKLEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRS--VFAVNWISYLASKEGMVIALVDGRGTAFQGDKLL 547 (719)
T ss_dssp EEEEEETTEEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCC--CCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHH
T ss_pred EEEEecCCeEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccc--cchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhH
Confidence 3445555577877766432 3468999999987753110 00001123344 6899999999999998753210
Q ss_pred ----CCCCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHH
Q 018947 95 ----DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (348)
Q Consensus 95 ----~~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (348)
.......++++.+.+..+++. ++.++++++||||||.+++.+|.++|++++++|++++.........
T Consensus 548 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~------- 620 (719)
T 1z68_A 548 YAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYAS------- 620 (719)
T ss_dssp GGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBH-------
T ss_pred HHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhcc-------
Confidence 000112344554445444442 2236899999999999999999999999999999998775432110
Q ss_pred HHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCc-cEEE
Q 018947 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-RSLI 247 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvl~ 247 (348)
.+...+++... ..+..+.+. . .+....+.++++ |+|+
T Consensus 621 ---------------~~~~~~~g~~~-------~~~~~~~~~----------------~----~~~~~~~~~~~~~P~li 658 (719)
T 1z68_A 621 ---------------VYTERFMGLPT-------KDDNLEHYK----------------N----STVMARAEYFRNVDYLL 658 (719)
T ss_dssp ---------------HHHHHHHCCSS-------TTTTHHHHH----------------H----TCSGGGGGGGTTSEEEE
T ss_pred ---------------ccchhhcCCcc-------cccchhhhh----------------h----CCHhHHHhcCCCCcEEE
Confidence 01111111110 000001110 0 122334567777 8999
Q ss_pred EecCCCCCC--chHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 248 FVGESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++|++|..+ .....+.+.++.. ..++++++++||....++++++.+.+.+||++.
T Consensus 659 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 717 (719)
T 1z68_A 659 IHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQC 717 (719)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHHh
Confidence 999999988 3555677776543 267999999999997778999999999999864
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=154.78 Aligned_cols=234 Identities=10% Similarity=0.035 Sum_probs=141.4
Q ss_pred ccceeecCCceeEEEEccC--CCCCeEEEeCCCC---CChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGD--QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~--~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~ 94 (348)
+...+.+.++.+.+..+-+ ..+|+||++||.+ ++...+. .....+.. .||.|+++|+|+.+....
T Consensus 64 ~~~~~~~~~g~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~~~------~~~~~la~~~g~~V~~~dyr~~p~~~~--- 134 (326)
T 3ga7_A 64 RTCAVPTPYGDVTTRLYSPQPTSQATLYYLHGGGFILGNLDTHD------RIMRLLARYTGCTVIGIDYSLSPQARY--- 134 (326)
T ss_dssp EEEEECCTTSCEEEEEEESSSSCSCEEEEECCSTTTSCCTTTTH------HHHHHHHHHHCSEEEEECCCCTTTSCT---
T ss_pred EEEEeecCCCCeEEEEEeCCCCCCcEEEEECCCCcccCChhhhH------HHHHHHHHHcCCEEEEeeCCCCCCCCC---
Confidence 4555666677887776643 3458999999988 5544332 22234444 599999999998765421
Q ss_pred CCCCCCCHHHHHHHHHHHHHH---cC--CCceeEEEeChhHHHHHHHHHhCCCC------cceEEEecCCCCCCChHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNH---FG--LGAVMCMGVTAGAYILTLFAMKYRHR------VLGLILVSPLCKAPSWTEWL 163 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~------v~~lvl~~~~~~~~~~~~~~ 163 (348)
...++|..+.+..+.+. ++ .++++++|||+||.+++.+|.+++++ +++++++.+...........
T Consensus 135 ----~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~ 210 (326)
T 3ga7_A 135 ----PQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRR 210 (326)
T ss_dssp ----THHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHHH
T ss_pred ----CcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhHh
Confidence 12344544444444432 23 36899999999999999999988764 99999998876543221110
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCc
Q 018947 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC 243 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 243 (348)
.. ..... .. .......+............ ..+ . ......+.+...
T Consensus 211 ---~~-----~~~~~-~l--------------------~~~~~~~~~~~~~~~~~~~~----~~~-~-~~~~~~~~~~~~ 255 (326)
T 3ga7_A 211 ---LF-----GGAWD-GL--------------------TREDLDMYEKAYLRNDEDRE----SPW-Y-CLFNNDLTRDVP 255 (326)
T ss_dssp ---HC-----CCTTT-TC--------------------CHHHHHHHHHHHCSSGGGGG----CTT-T-SGGGSCCSSCCC
T ss_pred ---hh-----cCCCC-CC--------------------CHHHHHHHHHHhCCCCCccC----Ccc-c-CCCcchhhcCCC
Confidence 00 00000 00 11111111111111000000 000 0 011122334567
Q ss_pred cEEEEecCCCCCCchHHHHHHhhccC--CcEEEEecCCCCCccc-----cChhhhHHHHHHHHhhc
Q 018947 244 RSLIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 244 Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 302 (348)
|+++++|+.|++++....+++.+... .++++++++++|.... ++.+++.+.+.+||++.
T Consensus 256 P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 321 (326)
T 3ga7_A 256 PCFIASAEFDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMAR 321 (326)
T ss_dssp CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecCcCcCHHHHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHH
Confidence 99999999999987777777777653 3699999999997743 34578899999999875
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.82 E-value=8.6e-19 Score=146.72 Aligned_cols=203 Identities=11% Similarity=0.056 Sum_probs=119.2
Q ss_pred CccceeecCCceeEEEEc---cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 20 GKDNLIKTSHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~---g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
.+...++.+|.+|....+ +....|.||++||++.+..... +...+..+.++||.|+++|+||||.|.......
T Consensus 31 e~~~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~----~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~ 106 (259)
T 4ao6_A 31 ERGFSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEY----IEQVAKLLVGRGISAMAIDGPGHGERASVQAGR 106 (259)
T ss_dssp EEEEEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CH----HHHHHHHHHHTTEEEEEECCCC-----------
T ss_pred EEEEEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchH----HHHHHHHHHHCCCeEEeeccCCCCCCCCccccc
Confidence 344456668888876655 3345678999999988754321 112335677899999999999999875431110
Q ss_pred CC---------------CCCHHHHHHHHHHHH----HHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 97 EP---------------VLSVDDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 97 ~~---------------~~~~~~~~~dl~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
.. .......+.|....+ ...+.+++.++|+|+||.+++.++...| ++++.|+........
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~~~~~~ 185 (259)
T 4ao6_A 107 EPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDK-RIKVALLGLMGVEGV 185 (259)
T ss_dssp --CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCT-TEEEEEEESCCTTST
T ss_pred ccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCC-ceEEEEEeccccccc
Confidence 00 011122223333333 3446789999999999999999999887 466666543322110
Q ss_pred ChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhh
Q 018947 158 SWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEG 237 (348)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (348)
.. .+..+.
T Consensus 186 ~~------------------------------------------------------------------------~~~~~~ 193 (259)
T 4ao6_A 186 NG------------------------------------------------------------------------EDLVRL 193 (259)
T ss_dssp TH------------------------------------------------------------------------HHHHHH
T ss_pred cc------------------------------------------------------------------------cchhhh
Confidence 00 011122
Q ss_pred hccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 238 LRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 238 l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+.++++|+|+++|++|..++ ....+.+.+..++.++++++ ++|... ...+..+.+.+||++.
T Consensus 194 a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~-G~H~~~--p~~e~~~~~~~fl~~h 257 (259)
T 4ao6_A 194 APQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNP-GKHSAV--PTWEMFAGTVDYLDQR 257 (259)
T ss_dssp GGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEES-SCTTCC--CHHHHTHHHHHHHHHH
T ss_pred hccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeC-CCCCCc--CHHHHHHHHHHHHHHh
Confidence 45788999999999999994 55678888887667788887 567432 2245667778888764
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.8e-20 Score=151.20 Aligned_cols=194 Identities=10% Similarity=0.118 Sum_probs=128.4
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCC---eEEEEeCCCCCCCCC--CCCC-------------CCCCCC-C
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN---FCIYHINPPGHEFGA--AAIS-------------DDEPVL-S 101 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g---~~vi~~D~~G~G~S~--~~~~-------------~~~~~~-~ 101 (348)
.+++|||+||++++...|.... ..+..++ ++|+++|.+++|.+. .... .....+ +
T Consensus 3 ~~~pvv~iHG~~~~~~~~~~~~------~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~ 76 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNRFDSLI------TELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKAN 76 (250)
T ss_dssp SCCCEEEECCCGGGHHHHHHHH------HHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHH------HHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccC
Confidence 5678999999999987764222 3444445 789988888777521 1100 000112 6
Q ss_pred HHHHHHHHHHHHHHc----CCCceeEEEeChhHHHHHHHHHhC-----CCCcceEEEecCCCCCCChHHHHHHHHHHHHH
Q 018947 102 VDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKY-----RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (348)
+++.++++.++++.+ +.++++++||||||.+++.|+.++ +++|+++|+++++.......
T Consensus 77 ~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~------------ 144 (250)
T 3lp5_A 77 IDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS------------ 144 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc------------
Confidence 788889988888777 888999999999999999999987 67899999999876542210
Q ss_pred HhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecC-
Q 018947 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE- 251 (348)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~- 251 (348)
+.. .....+.+. +....+.. ++|+++|+|+
T Consensus 145 -------------------~~~-------~~~~~~~l~----------------------~~~~~lp~-~vpvl~I~G~~ 175 (250)
T 3lp5_A 145 -------------------TTA-------KTSMFKELY----------------------RYRTGLPE-SLTVYSIAGTE 175 (250)
T ss_dssp -------------------SSC-------CCHHHHHHH----------------------HTGGGSCT-TCEEEEEECCC
T ss_pred -------------------ccc-------cCHHHHHHH----------------------hccccCCC-CceEEEEEecC
Confidence 000 111111110 00122232 7899999999
Q ss_pred ---CCCCCch--HHHHHHhhccCCc--EEEEec--CCCCCccccChhhhHHHHHHHHhhc
Q 018947 252 ---SSPFHSE--AVHMTSKIDRRYS--ALVEVQ--ACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 252 ---~D~~~~~--~~~~~~~~~~~~~--~~~~~~--~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.|.+++. +..+...+++... +.+.+. +++|..+.++| ++.+.|.+||.+.
T Consensus 176 ~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~~ 234 (250)
T 3lp5_A 176 NYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYLLAE 234 (250)
T ss_dssp CCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTSCC
T ss_pred CCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHHHHhcc
Confidence 8988843 3335555554222 233343 57799999998 8999999999765
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.5e-19 Score=148.41 Aligned_cols=241 Identities=9% Similarity=-0.002 Sum_probs=132.9
Q ss_pred eecCCceeEEEEccCCCCCeEEEeCCCC---CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 25 IKTSHGSLSVTIYGDQDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 25 v~~~~~~l~~~~~g~~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
...++.++.++.......|+||++||.| ++...+.. .....+...||+|+++|+|+.++ ..
T Consensus 10 ~~~~~~~~~~y~p~~~~~p~iv~~HGGg~~~g~~~~~~~-----~~~~~l~~~g~~Vi~vdYrlaPe-----------~~ 73 (274)
T 2qru_A 10 TLANGATVTIYPTTTEPTNYVVYLHGGGMIYGTKSDLPE-----ELKELFTSNGYTVLALDYLLAPN-----------TK 73 (274)
T ss_dssp ECTTSCEEEEECCSSSSCEEEEEECCSTTTSCCGGGCCH-----HHHHHHHTTTEEEEEECCCCTTT-----------SC
T ss_pred cccCCeeEEEEcCCCCCCcEEEEEeCccccCCChhhchH-----HHHHHHHHCCCEEEEeCCCCCCC-----------CC
Confidence 3345556666543224568999999988 33332211 12233446699999999998643 24
Q ss_pred HHHHHHHHHHHHHHcC-----CCceeEEEeChhHHHHHHHHH---hCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHH
Q 018947 102 VDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAM---KYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLY 173 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 173 (348)
+...++|+.++++.+. .++++|+|+|+||.+|+.++. ..+.++++++++.+.......... ..
T Consensus 74 ~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~--~~------- 144 (274)
T 2qru_A 74 IDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEP--RK------- 144 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSC--CC-------
T ss_pred CcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCc--hh-------
Confidence 5566666666555443 789999999999999999997 357789999998775541100000 00
Q ss_pred hhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCC-----ccH-HhhhccCCccEEE
Q 018947 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGR-----PDI-SEGLRKLQCRSLI 247 (348)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~l~~i~~Pvl~ 247 (348)
....... .................. ......... .... ..+..+.. .... ... ...+..+ .|+++
T Consensus 145 -~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~l-pP~li 215 (274)
T 2qru_A 145 -LLKQAIS-AKEIAAIDQTKPVWDDPF-LSRYLLYHY---SIQQ-ALLPHFYG-LPENGDWSAYALSDETLKTF-PPCFS 215 (274)
T ss_dssp -SCSSCCC-SGGGTTSCCSSCCSCCTT-CTTHHHHHH---HHHT-TCHHHHHT-CCTTSCCGGGCCCHHHHHTS-CCEEE
T ss_pred -hcccccc-HHHHhhhcccCCCCCCcc-ccchhhhhh---hhhh-cchhhccC-cccccccccCCCChhhhcCC-CCEEE
Confidence 0000000 000000000000000000 000000000 0000 00110000 0000 001 1235566 79999
Q ss_pred EecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChh----hhHHHHHHHHhh
Q 018947 248 FVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPH----AMLIPMEYFLMG 301 (348)
Q Consensus 248 i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~fl~~ 301 (348)
++|+.|+.+ ..++.+.+.+++ ++++++++++|..+.+.+. ++.+.+.+||++
T Consensus 216 ~~G~~D~~~~~~~~~~l~~~~~~--~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 216 TASSSDEEVPFRYSKKIGRTIPE--STFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp EEETTCSSSCTHHHHHHHHHSTT--CEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred EEecCCCCcCHHHHHHHHHhCCC--cEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 999999987 356668888876 8999999999988766544 457778888875
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=172.26 Aligned_cols=229 Identities=11% Similarity=0.122 Sum_probs=145.5
Q ss_pred ccceeecCCceeEEEEccCC------CCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCC-
Q 018947 21 KDNLIKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAA- 92 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~------~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~- 92 (348)
+...+.+.++++.+..+.++ ..|+||++||.+.+.... ..+.+ .....++ ..||.|+++|+||+|.+...
T Consensus 469 ~~~~~~~~~g~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~-~~~~~-~~~~~~l~~~G~~vv~~d~rG~g~~g~~~ 546 (723)
T 1xfd_A 469 EYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVA-EKFEV-SWETVMVSSHGAVVVKCDGRGSGFQGTKL 546 (723)
T ss_dssp CBCCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCC-CCCCC-SHHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred eEEEEEcCCceEEEEEEeCCCCCCCCccCEEEEEcCCCCccccC-ccccc-cHHHHHhhcCCEEEEEECCCCCccccHHH
Confidence 34445555557776665432 347899999988763210 00000 1112334 47999999999999974211
Q ss_pred ---CCCCCCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhC----CCCcceEEEecCCCCCCChHHHH
Q 018947 93 ---ISDDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAPSWTEWL 163 (348)
Q Consensus 93 ---~~~~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~ 163 (348)
.........++++.+.+..+.+. ++.++++++||||||.+++.+|.++ |++++++|++++.........
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~-- 624 (723)
T 1xfd_A 547 LHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYAS-- 624 (723)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBH--
T ss_pred HHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhh--
Confidence 01111224566666666665543 2346899999999999999999999 999999999998765432110
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCC-
Q 018947 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ- 242 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~- 242 (348)
.+...++..... ... . ....+....+.+++
T Consensus 625 --------------------~~~~~~~~~~~~------~~~-------~----------------~~~~~~~~~~~~~~~ 655 (723)
T 1xfd_A 625 --------------------AFSERYLGLHGL------DNR-------A----------------YEMTKVAHRVSALEE 655 (723)
T ss_dssp --------------------HHHHHHHCCCSS------CCS-------S----------------TTTTCTHHHHTSCCS
T ss_pred --------------------hccHhhcCCccC------Chh-------H----------------HHhcChhhHHhhcCC
Confidence 011111111100 000 0 00012234456788
Q ss_pred ccEEEEecCCCCCCc--hHHHHHHhhcc--CCcEEEEecCCCCCc-cccChhhhHHHHHHHHhhc
Q 018947 243 CRSLIFVGESSPFHS--EAVHMTSKIDR--RYSALVEVQACGSMV-TEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 243 ~Pvl~i~g~~D~~~~--~~~~~~~~~~~--~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~~ 302 (348)
+|+|+++|++|..++ ....+.+.+.. ...++++++++||.+ ..++++++.+.+.+||++.
T Consensus 656 ~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 720 (723)
T 1xfd_A 656 QQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 720 (723)
T ss_dssp CEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHH
Confidence 899999999999983 45567776643 237999999999998 5688999999999999875
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.81 E-value=9.9e-19 Score=151.17 Aligned_cols=213 Identities=11% Similarity=0.022 Sum_probs=131.1
Q ss_pred CCCCeEEEeCCCC---CChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 40 QDKPALVTYPDLA---LNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 40 ~~~p~vvllHG~~---~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
...|+||++||.+ ++...+. .....+.. .||.|+++|+|+.++.. ....++|..+.+..+.+.
T Consensus 78 ~~~p~vv~~HGGg~~~g~~~~~~------~~~~~la~~~g~~vv~~dyr~~p~~~-------~~~~~~D~~~a~~~l~~~ 144 (322)
T 3fak_A 78 QAGKAILYLHGGGYVMGSINTHR------SMVGEISRASQAAALLLDYRLAPEHP-------FPAAVEDGVAAYRWLLDQ 144 (322)
T ss_dssp CTTCEEEEECCSTTTSCCHHHHH------HHHHHHHHHHTSEEEEECCCCTTTSC-------TTHHHHHHHHHHHHHHHH
T ss_pred CCccEEEEEcCCccccCChHHHH------HHHHHHHHhcCCEEEEEeCCCCCCCC-------CCcHHHHHHHHHHHHHHc
Confidence 4578999999966 3332222 12234444 49999999999876542 224567777777766666
Q ss_pred -cCCCceeEEEeChhHHHHHHHHHhCCCC----cceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhh
Q 018947 116 -FGLGAVMCMGVTAGAYILTLFAMKYRHR----VLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYF 190 (348)
Q Consensus 116 -l~~~~v~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (348)
++.++++|+|||+||.+++.+|.+.+++ ++++|+++|............. ....
T Consensus 145 ~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~--------~~~~------------- 203 (322)
T 3fak_A 145 GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKT--------RAEA------------- 203 (322)
T ss_dssp TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHH--------TTTT-------------
T ss_pred CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHH--------hCcc-------------
Confidence 4557899999999999999999887765 9999999998765322111000 0000
Q ss_pred cccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccC
Q 018947 191 SKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRR 269 (348)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~ 269 (348)
.... .......+...+... ..... ........+..+ .|+|+++|+.|.+++....+++.+...
T Consensus 204 -~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~sp~~~~~~~~-pP~li~~g~~D~~~~~~~~~~~~l~~~ 267 (322)
T 3fak_A 204 -DPMV------APGGINKMAARYLNGADAKHP--------YASPNFANLKGL-PPLLIHVGRDEVLLDDSIKLDAKAKAD 267 (322)
T ss_dssp -CCSC------CSSHHHHHHHHHHTTSCTTCT--------TTCGGGSCCTTC-CCEEEEEETTSTTHHHHHHHHHHHHHT
T ss_pred -Cccc------CHHHHHHHHHHhcCCCCCCCc--------ccCCCcccccCC-ChHhEEEcCcCccHHHHHHHHHHHHHc
Confidence 0000 111111111111100 00000 000111112222 499999999999877677777777653
Q ss_pred --CcEEEEecCCCCCccc-----cChhhhHHHHHHHHhhc
Q 018947 270 --YSALVEVQACGSMVTE-----EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 270 --~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 302 (348)
.++++++++++|.... +..+++.+.+.+||++.
T Consensus 268 g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (322)
T 3fak_A 268 GVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQ 307 (322)
T ss_dssp TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHH
Confidence 3689999999997653 44678899999999876
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-20 Score=158.71 Aligned_cols=203 Identities=10% Similarity=0.056 Sum_probs=127.8
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHc
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA---EVLNHF 116 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~---~~l~~l 116 (348)
...|+|||+||.+........ +......+..+||.|+++|+||+|.+..+ ...++..+.+. +..+.+
T Consensus 80 ~~~p~vv~~HGgg~~~~~~~~---~~~~~~~l~~~G~~v~~~d~r~~~~~~~~-------~~~~d~~~~~~~l~~~~~~~ 149 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMDMSM---SCSIVGPLVRRGYRVAVMDYNLCPQVTLE-------QLMTQFTHFLNWIFDYTEMT 149 (303)
T ss_dssp TTCCEEEEECCSTTTSCCGGG---SCTTHHHHHHTTCEEEEECCCCTTTSCHH-------HHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcCcCCChhH---HHHHHHHHHhCCCEEEEecCCCCCCCChh-------HHHHHHHHHHHHHHHHhhhc
Confidence 467899999995432221111 12233556678999999999999764311 12233332222 223466
Q ss_pred CCCceeEEEeChhHHHHHHHHHhCC-------CCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Q 018947 117 GLGAVMCMGVTAGAYILTLFAMKYR-------HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (348)
Q Consensus 117 ~~~~v~lvGhS~Gg~ia~~~a~~~p-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (348)
+.++++++|||+||.+++.++.+.+ ++|+++|++++......... .... ....+
T Consensus 150 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~--------------~~~~-----~~~~~ 210 (303)
T 4e15_A 150 KVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSN--------------LESV-----NPKNI 210 (303)
T ss_dssp TCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHT--------------CTTT-----SGGGT
T ss_pred CCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhc--------------cccc-----chhhh
Confidence 7789999999999999999988654 37999999998765411000 0000 00011
Q ss_pred hcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhc----cCCccEEEEecCCCCCC--chHHHHH
Q 018947 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR----KLQCRSLIFVGESSPFH--SEAVHMT 263 (348)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~Pvl~i~g~~D~~~--~~~~~~~ 263 (348)
+... .+.. . ........+. .+.+|+|+++|++|..+ .....+.
T Consensus 211 ~~~~---------~~~~-------~---------------~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~ 259 (303)
T 4e15_A 211 LGLN---------ERNI-------E---------------SVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYA 259 (303)
T ss_dssp TCCC---------TTTT-------T---------------TTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHH
T ss_pred hcCC---------HHHH-------H---------------HcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHH
Confidence 1100 0000 0 0001111222 34899999999999977 4566677
Q ss_pred HhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 264 SKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 264 ~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+.++.. .+++++++++||+.+++........+.+||.+.
T Consensus 260 ~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 260 DVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRNI 300 (303)
T ss_dssp HHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHHHHHHH
T ss_pred HHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHHHHHHh
Confidence 777642 379999999999999999999999999888654
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-18 Score=148.58 Aligned_cols=211 Identities=14% Similarity=0.125 Sum_probs=133.0
Q ss_pred eEEEeCC--CCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-CCCc
Q 018947 44 ALVTYPD--LALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF-GLGA 120 (348)
Q Consensus 44 ~vvllHG--~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-~~~~ 120 (348)
+|+|+|| .+++...|. .+...+..+++|+++|+||+|.+... .......+++++++++.+.++.+ ...+
T Consensus 91 ~l~~~hg~g~~~~~~~~~-------~l~~~L~~~~~v~~~d~~G~g~~~~~-~~~~~~~~~~~~a~~~~~~i~~~~~~~p 162 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFL-------RLSTSFQEERDFLAVPLPGYGTGTGT-GTALLPADLDTALDAQARAILRAAGDAP 162 (319)
T ss_dssp EEEEECCCCTTCSTTTTH-------HHHHTTTTTCCEEEECCTTCCBC----CBCCEESSHHHHHHHHHHHHHHHHTTSC
T ss_pred cEEEeCCCCCCCcHHHHH-------HHHHhcCCCCceEEecCCCCCCCccc-ccCCCCCCHHHHHHHHHHHHHHhcCCCC
Confidence 8999998 444443321 12455678999999999999986210 00123579999999999999876 4678
Q ss_pred eeEEEeChhHHHHHHHHHhC----CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccC
Q 018947 121 VMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRG 196 (348)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (348)
++++||||||.+|+++|.+. +++|++++++++........ . . ..+. ......+...+.+.
T Consensus 163 ~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~--~--~---~~~~------~l~~~~~~~~~~~~--- 226 (319)
T 2hfk_A 163 VVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP--I--E---VWSR------QLGEGLFAGELEPM--- 226 (319)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH--H--H---HTHH------HHHHHHHHTCSSCC---
T ss_pred EEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH--H--H---HHHH------HhhHHHHHhhcccc---
Confidence 99999999999999999986 56799999999876433211 0 0 0000 00011111111000
Q ss_pred CCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCch---HHHHHHhhccCCcEE
Q 018947 197 NAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSE---AVHMTSKIDRRYSAL 273 (348)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~---~~~~~~~~~~~~~~~ 273 (348)
.......+ ..+...+.. . ....+++|+++++| +|..++. ...+.+.++ ...++
T Consensus 227 -----~~~~~~~~------------~~~~~~~~~-~----~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~-~~~~~ 282 (319)
T 2hfk_A 227 -----SDARLLAM------------GRYARFLAG-P----RPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWD-LPHTV 282 (319)
T ss_dssp -----CHHHHHHH------------HHHHHHHHS-C----CCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCS-SCSEE
T ss_pred -----chHHHHHH------------HHHHHHHHh-C----CCCCcCCCEEEEEc-CCCCCCccccccchhhcCC-CCCEE
Confidence 11111100 011111111 1 13678999999999 8987732 222333333 23788
Q ss_pred EEecCCCCCccc-cChhhhHHHHHHHHhhcc
Q 018947 274 VEVQACGSMVTE-EQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 274 ~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 303 (348)
+.++ +||+.++ ++++++++.|.+||++..
T Consensus 283 ~~v~-g~H~~~~~e~~~~~~~~i~~~L~~~~ 312 (319)
T 2hfk_A 283 ADVP-GDHFTMMRDHAPAVAEAVLSWLDAIE 312 (319)
T ss_dssp EEES-SCTTHHHHTCHHHHHHHHHHHHHHHH
T ss_pred EEeC-CCcHHHHHHhHHHHHHHHHHHHHhcC
Confidence 9998 7999765 899999999999998763
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-19 Score=151.99 Aligned_cols=200 Identities=10% Similarity=0.029 Sum_probs=127.9
Q ss_pred CCCCeEEEeCCCCCChhh-hccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018947 40 QDKPALVTYPDLALNYMS-CFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~-~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~ 118 (348)
..+++|||+||++++... |...+ ...+.+.||+|+++|+||||.++. ..+.+++++.+..+++..+.
T Consensus 29 ~~~~~VvllHG~~~~~~~~~~~~l-----~~~L~~~G~~v~~~d~~g~g~~~~-------~~~~~~l~~~i~~~~~~~g~ 96 (317)
T 1tca_A 29 SVSKPILLVPGTGTTGPQSFDSNW-----IPLSTQLGYTPCWISPPPFMLNDT-------QVNTEYMVNAITALYAGSGN 96 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHHTTTH-----HHHHHTTTCEEEEECCTTTTCSCH-------HHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEEECCCCCCcchhhHHHH-----HHHHHhCCCEEEEECCCCCCCCcH-------HHHHHHHHHHHHHHHHHhCC
Confidence 356789999999999865 43122 234445699999999999987531 13456777777788888888
Q ss_pred CceeEEEeChhHHHHHHHHHhCC---CCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccccc
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
++++++||||||.++..++..+| ++|+++|++++............ .... .
T Consensus 97 ~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~---------~~~~-------------~---- 150 (317)
T 1tca_A 97 NKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLD---------ALAV-------------S---- 150 (317)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHH---------HTTC-------------B----
T ss_pred CCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhh---------hhhh-------------c----
Confidence 99999999999999999988876 78999999998765432211100 0000 0
Q ss_pred CCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc-hH---HHHHHhhccCCc
Q 018947 196 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS-EA---VHMTSKIDRRYS 271 (348)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~-~~---~~~~~~~~~~~~ 271 (348)
.....+ ......+...+... . . ...++|+++|+|+.|.+++ .. ......+.. +
T Consensus 151 ------~~~~~~-------~~~~s~f~~~L~~~-~-~------~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~--a 207 (317)
T 1tca_A 151 ------APSVWQ-------QTTGSALTTALRNA-G-G------LTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFN--G 207 (317)
T ss_dssp ------CHHHHH-------TBTTCHHHHHHHHT-T-T------TBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBT--S
T ss_pred ------CchHHh-------hCcCcHHHHHHHhc-C-C------CCCCCCEEEEEeCCCCeECCccccccchhhhccC--C
Confidence 011000 00000111111110 0 0 1246899999999999883 22 122334443 4
Q ss_pred EEEEe-------cCCCCCccccChhhhHHHHHHHHhh
Q 018947 272 ALVEV-------QACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 272 ~~~~~-------~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+.+.+ ++.||..+.++|+.+ +.|.+||+.
T Consensus 208 ~~~~~~~~~~~~~~~gH~~~l~~p~~~-~~v~~~L~~ 243 (317)
T 1tca_A 208 KNVQAQAVCGPLFVIDHAGSLTSQFSY-VVGRSALRS 243 (317)
T ss_dssp EEEEHHHHHCTTCCCCTTHHHHBHHHH-HHHHHHHHC
T ss_pred ccEEeeeccCCCCccCcccccCCHHHH-HHHHHHhcC
Confidence 44444 478999999999864 677899987
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=167.31 Aligned_cols=227 Identities=11% Similarity=0.081 Sum_probs=144.8
Q ss_pred eecCCceeEEEEccCC------CCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCC---
Q 018947 25 IKTSHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAIS--- 94 (348)
Q Consensus 25 v~~~~~~l~~~~~g~~------~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~--- 94 (348)
+..+|..+++..+.++ ..|+||++||.+.+...... . .......++ .+||.|+++|+||+|.+.....
T Consensus 479 ~~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~-~-~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~ 556 (740)
T 4a5s_A 479 IILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTV-F-RLNWATYLASTENIIVASFDGRGSGYQGDKIMHAI 556 (740)
T ss_dssp EEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCC-C-CCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGG
T ss_pred EccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccc-c-CcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHH
Confidence 3446777888776432 34789999998777421100 0 001123444 4899999999999997643210
Q ss_pred -CCCCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 95 -DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 95 -~~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
.......++|+.+.+..+++. ++.+++.++||||||.+++.+|.++|++++++|++++........
T Consensus 557 ~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~----------- 625 (740)
T 4a5s_A 557 NRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYD----------- 625 (740)
T ss_dssp TTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSB-----------
T ss_pred HhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhh-----------
Confidence 111123355665555555432 123689999999999999999999999999999999876532110
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCc-cEEEEec
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-RSLIFVG 250 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvl~i~g 250 (348)
.....++++... ..+..+.+. . .+....+.++++ |+|+++|
T Consensus 626 -----------~~~~~~~~~~p~-------~~~~~~~~~----------------~----~~~~~~~~~i~~~P~Lii~G 667 (740)
T 4a5s_A 626 -----------SVYTERYMGLPT-------PEDNLDHYR----------------N----STVMSRAENFKQVEYLLIHG 667 (740)
T ss_dssp -----------HHHHHHHHCCSS-------TTTTHHHHH----------------H----SCSGGGGGGGGGSEEEEEEE
T ss_pred -----------hHHHHHHcCCCC-------ccccHHHHH----------------h----CCHHHHHhcCCCCcEEEEEc
Confidence 011111222110 000111110 0 122334566776 9999999
Q ss_pred CCCCCC--chHHHHHHhhccC--CcEEEEecCCCCCc-cccChhhhHHHHHHHHhhc
Q 018947 251 ESSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMV-TEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~~ 302 (348)
+.|..+ .....+.+.+... ..++++++++||.+ ..+.++++.+.+.+||++.
T Consensus 668 ~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 724 (740)
T 4a5s_A 668 TADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQC 724 (740)
T ss_dssp TTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHH
Confidence 999988 3455677776543 36899999999988 5678899999999999887
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=139.62 Aligned_cols=179 Identities=12% Similarity=0.103 Sum_probs=117.8
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHH---H
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI--SDDEPVLSVDDLADQIAEVLN---H 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~~~~dl~~~l~---~ 115 (348)
.+++|||+||+|++...+.. ....+...++.|+++|.+|++.-+... +.......+++..+.+..+++ .
T Consensus 21 a~~~Vv~lHG~G~~~~~~~~------l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADIIS------LQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEA 94 (210)
T ss_dssp CSEEEEEECCTTCCHHHHHG------GGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHH------HHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999876542 223445579999999999876311110 111122345555555555543 3
Q ss_pred cC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccc
Q 018947 116 FG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE 193 (348)
Q Consensus 116 l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (348)
.+ .++++++|+|+||.+++.++.++|++++++|.+++........ ...
T Consensus 95 ~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~------------------------------~~~ 144 (210)
T 4h0c_A 95 QGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA------------------------------IGN 144 (210)
T ss_dssp TTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC------------------------------GGG
T ss_pred hCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh------------------------------hhh
Confidence 33 3689999999999999999999999999999987643211100 000
Q ss_pred ccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccC--
Q 018947 194 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRR-- 269 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~-- 269 (348)
. . ....++|+++++|++|++++ ..+++.+.+...
T Consensus 145 ~-------~-----------------------------------~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~ 182 (210)
T 4h0c_A 145 Y-------K-----------------------------------GDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNA 182 (210)
T ss_dssp C-------C-----------------------------------BCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTC
T ss_pred h-------h-----------------------------------hhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 0 0 00124799999999999984 444556655543
Q ss_pred CcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 270 YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 270 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.++++++|+.||.+. +++ .+.|.+||.+
T Consensus 183 ~v~~~~ypg~gH~i~---~~e-l~~i~~wL~k 210 (210)
T 4h0c_A 183 AVSQVVYPGRPHTIS---GDE-IQLVNNTILK 210 (210)
T ss_dssp EEEEEEEETCCSSCC---HHH-HHHHHHTTTC
T ss_pred CeEEEEECCCCCCcC---HHH-HHHHHHHHcC
Confidence 278899999999764 444 4567888754
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=145.41 Aligned_cols=216 Identities=10% Similarity=0.075 Sum_probs=132.9
Q ss_pred CCceeEEEEccC-----CCCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCCC-----
Q 018947 28 SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDD----- 96 (348)
Q Consensus 28 ~~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~~----- 96 (348)
.+..+.+..+-+ ...|+||++||++++...|.....+ ..++ ..||.|+++|+||+|.|.......
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~----~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~ 100 (278)
T 3e4d_A 25 LKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEY----RRMASELGLVVVCPDTSPRGNDVPDELTNWQMGK 100 (278)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCC----HHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBT
T ss_pred cCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcccH----HHHHhhCCeEEEecCCcccCcccccccccccccC
Confidence 455666666532 3457999999999988776432111 2333 349999999999999875331000
Q ss_pred -------------CCCCC-HHHHHHHHHHHHHHc-CC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh
Q 018947 97 -------------EPVLS-VDDLADQIAEVLNHF-GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159 (348)
Q Consensus 97 -------------~~~~~-~~~~~~dl~~~l~~l-~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 159 (348)
...+. .+.+++++..+++.. ++ ++++++|||+||.+++.+|.++|+++++++++++.......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~ 180 (278)
T 3e4d_A 101 GAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSA 180 (278)
T ss_dssp TBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGGC
T ss_pred CccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccCC
Confidence 01112 334456777777654 66 78999999999999999999999999999999987653211
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhc
Q 018947 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 239 (348)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 239 (348)
. +. ...+..+++... .. +... +....+.
T Consensus 181 ~-~~-------------------~~~~~~~~~~~~--------~~--------~~~~----------------~~~~~~~ 208 (278)
T 3e4d_A 181 D-WS-------------------EPALEKYLGADR--------AA--------WRRY----------------DACSLVE 208 (278)
T ss_dssp T-TT-------------------HHHHHHHHCSCG--------GG--------GGGG----------------CHHHHHH
T ss_pred c-cc-------------------hhhHHHhcCCcH--------HH--------HHhc----------------ChhhHhh
Confidence 0 00 001111122110 00 0000 1111111
Q ss_pred c--CCccEEEEecCCCCCCch---HHHHHHhhccCC--cEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 240 K--LQCRSLIFVGESSPFHSE---AVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 240 ~--i~~Pvl~i~g~~D~~~~~---~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
. ..+|+++++|++|.+++. ...+.+.+...+ ++++++++++|.... .+.+.+.+.+|+.+
T Consensus 209 ~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~ 275 (278)
T 3e4d_A 209 DGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRMHDRYDHSYYF--ISTFMDDHLKWHAE 275 (278)
T ss_dssp TTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSCEEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred cCCCCCcEEEEecCCCcccccchhHHHHHHHHHHcCCCceEEEeCCCCcCHHH--HHHHHHHHHHHHHH
Confidence 1 356999999999999864 466777776543 688999999996543 22344444455543
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=143.76 Aligned_cols=204 Identities=12% Similarity=0.071 Sum_probs=124.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCe---EEEEeCCCCCC------CCCCCCCCC-------CCCCCHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF---CIYHINPPGHE------FGAAAISDD-------EPVLSVDD 104 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~---~vi~~D~~G~G------~S~~~~~~~-------~~~~~~~~ 104 (348)
.+++|||+||++++...|.. .+..+...++ .++++|..++| .+....... ...+++++
T Consensus 2 ~~~pvvllHG~~~~~~~~~~------l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 75 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASSLDK------MADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDD 75 (254)
T ss_dssp CCCCEEEECCTTCCTTTTHH------HHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHH
T ss_pred CCCCEEEECCCCCCcchHHH------HHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHH
Confidence 46789999999999876532 2233333332 33443333332 121100000 12468999
Q ss_pred HHHHH----HHHHHHcCCCceeEEEeChhHHHHHHHHHhCCC-----CcceEEEecCCCCCCChHHHHHHHHHHHHHHhh
Q 018947 105 LADQI----AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (348)
Q Consensus 105 ~~~dl----~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (348)
+++++ ..+.+.++.++++++||||||.+++.++.++|+ +|+++|+++++......... ..
T Consensus 76 ~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~-----------~~ 144 (254)
T 3ds8_A 76 WSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDN-----------GM 144 (254)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHH-----------CS
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccc-----------cc
Confidence 99998 455567788999999999999999999999998 89999999987765432100 00
Q ss_pred ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecC----
Q 018947 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE---- 251 (348)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~---- 251 (348)
. +....... .......+ . .....+.. ++|++.|+|.
T Consensus 145 ~-------------~~~~~~p~----~~~~~~~~---------------~-------~~~~~~~~-~~~vl~I~G~~~~~ 184 (254)
T 3ds8_A 145 D-------------LSFKKLPN----STPQMDYF---------------I-------KNQTEVSP-DLEVLAIAGELSED 184 (254)
T ss_dssp C-------------TTCSSCSS----CCHHHHHH---------------H-------HTGGGSCT-TCEEEEEEEESBTT
T ss_pred c-------------cccccCCc----chHHHHHH---------------H-------HHHhhCCC-CcEEEEEEecCCCC
Confidence 0 00000000 00011100 0 01111222 7899999999
Q ss_pred --CCCCCch--HHHHHHhhccCC--cEEEEecC--CCCCccccChhhhHHHHHHHHhhc
Q 018947 252 --SSPFHSE--AVHMTSKIDRRY--SALVEVQA--CGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 252 --~D~~~~~--~~~~~~~~~~~~--~~~~~~~~--~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.|.+++. +..+...+++.. .+.+++.+ ++|..+.++|+ +.+.|..||++.
T Consensus 185 ~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~~ 242 (254)
T 3ds8_A 185 NPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEKF 242 (254)
T ss_dssp BCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHTC
T ss_pred CCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHHh
Confidence 9999843 334555555421 33445555 78999999885 999999999987
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.7e-19 Score=145.67 Aligned_cols=198 Identities=11% Similarity=0.033 Sum_probs=124.2
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-C
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-L 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~ 118 (348)
..+++|||+||++++...|.. ....+..+|+|+++|+||++ ++++++.++++.+. .
T Consensus 20 ~~~~~l~~~hg~~~~~~~~~~-------~~~~l~~~~~v~~~d~~g~~----------------~~~~~~~~~i~~~~~~ 76 (244)
T 2cb9_A 20 QGGKNLFCFPPISGFGIYFKD-------LALQLNHKAAVYGFHFIEED----------------SRIEQYVSRITEIQPE 76 (244)
T ss_dssp CCSSEEEEECCTTCCGGGGHH-------HHHHTTTTSEEEEECCCCST----------------THHHHHHHHHHHHCSS
T ss_pred CCCCCEEEECCCCCCHHHHHH-------HHHHhCCCceEEEEcCCCHH----------------HHHHHHHHHHHHhCCC
Confidence 356899999999988765431 13556679999999999973 23566667777765 5
Q ss_pred CceeEEEeChhHHHHHHHHHhC---CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccccc
Q 018947 119 GAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
++++++||||||.+++.+|.+. ++++.+++++++......+.. ... ...+..++
T Consensus 77 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~---------------~~~---~~~~~~~~----- 133 (244)
T 2cb9_A 77 GPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITA---------------DTE---NDDSAAYL----- 133 (244)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCC---------------C----------CCS-----
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccc---------------ccc---HHHHHHHh-----
Confidence 7899999999999999999876 578999999997654211100 000 00000000
Q ss_pred CCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecC--CCCCCchH-HHHHHhhccCCcE
Q 018947 196 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE--SSPFHSEA-VHMTSKIDRRYSA 272 (348)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~--~D~~~~~~-~~~~~~~~~~~~~ 272 (348)
.+...+.+...+. .+..+... ......+++|+++++|+ +|...+.. ..+.+... ...+
T Consensus 134 ------~~~~~~~~~~~~~-----~~~~~~~~-------~~~~~~i~~Pvl~i~g~~~~D~~~~~~~~~w~~~~~-~~~~ 194 (244)
T 2cb9_A 134 ------PEAVRETVMQKKR-----CYQEYWAQ-------LINEGRIKSNIHFIEAGIQTETSGAMVLQKWQDAAE-EGYA 194 (244)
T ss_dssp ------CHHHHHHHTHHHH-----HHHHHHHH-------CCCCSCBSSEEEEEECSBCSCCCHHHHTTSSGGGBS-SCEE
T ss_pred ------HHHHHHHHHHHHH-----HHHHHHHh-------hccCCCcCCCEEEEEccCccccccccchhHHHHhcC-CCCE
Confidence 1111111110000 01111000 01346789999999999 88743221 12333332 2478
Q ss_pred EEEecCCCC--CccccChhhhHHHHHHHHhhcc
Q 018947 273 LVEVQACGS--MVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 273 ~~~~~~~gH--~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
+++++ +|| ++..++++++++.|.+||.+..
T Consensus 195 ~~~i~-ggH~~~~~~~~~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 195 EYTGY-GAHKDMLEGEFAEKNANIILNILDKIN 226 (244)
T ss_dssp EEECS-SBGGGTTSHHHHHHHHHHHHHHHHTC-
T ss_pred EEEec-CChHHHcChHHHHHHHHHHHHHHhcCc
Confidence 99998 599 7777899999999999998764
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-18 Score=162.20 Aligned_cols=233 Identities=11% Similarity=0.036 Sum_probs=141.3
Q ss_pred ccceeec-CCceeEEEEccC------CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
++..+.. +|.++.+..+.+ ...|+||++||........ .|......++++||.|+++|+||+|.+....
T Consensus 418 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~----~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~ 493 (695)
T 2bkl_A 418 EQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEA----NFRSSILPWLDAGGVYAVANLRGGGEYGKAW 493 (695)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCC----CCCGGGHHHHHTTCEEEEECCTTSSTTCHHH
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCC----CcCHHHHHHHhCCCEEEEEecCCCCCcCHHH
Confidence 3444554 455777765421 3568999999976654422 1112224567889999999999988754211
Q ss_pred CCCC----CCCCHHHHHHHHHHHHHHc--CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH
Q 018947 94 SDDE----PVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (348)
Q Consensus 94 ~~~~----~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (348)
.... ....++|+.+.+..+++.- +.+++.++|||+||++++.++.++|++++++|+..+.........
T Consensus 494 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~------ 567 (695)
T 2bkl_A 494 HDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHL------ 567 (695)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG------
T ss_pred HHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccc------
Confidence 0000 1122344444444444332 346899999999999999999999999999999998776432100
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCC--ccE
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ--CRS 245 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pv 245 (348)
..... .....+..+. .++..+.+ ..+ .....+..++ .|+
T Consensus 568 -------~~~~~----~~~~~~g~~~--------~~~~~~~~----------------~~~----sp~~~~~~~~~~~P~ 608 (695)
T 2bkl_A 568 -------FGSGR----TWIPEYGTAE--------KPEDFKTL----------------HAY----SPYHHVRPDVRYPAL 608 (695)
T ss_dssp -------STTGG----GGHHHHCCTT--------SHHHHHHH----------------HHH----CGGGCCCSSCCCCEE
T ss_pred -------cCCCc----chHHHhCCCC--------CHHHHHHH----------------Hhc----ChHhhhhhcCCCCCE
Confidence 00000 0011111100 11111111 111 1122344444 699
Q ss_pred EEEecCCCCCCc--hHHHHHHhhcc-----CCcEEEEecCCCCCcc--ccChhhhHHHHHHHHhhc
Q 018947 246 LIFVGESSPFHS--EAVHMTSKIDR-----RYSALVEVQACGSMVT--EEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 246 l~i~g~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~~gH~~~--~e~p~~~~~~i~~fl~~~ 302 (348)
|+++|++|..++ ...++.+.+.. ..+++++++++||... .+++.++.+.+.+||.+.
T Consensus 609 Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 674 (695)
T 2bkl_A 609 LMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQV 674 (695)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999883 55567777754 3478999999999874 345677888899999876
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-18 Score=163.63 Aligned_cols=233 Identities=7% Similarity=-0.005 Sum_probs=143.5
Q ss_pred ccceeec-CCceeEEEEccC------CCCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAA 92 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~ 92 (348)
++..+.. +|.++++..+.+ ...|+||++||.+.....+. |......+++ +||.|+++|+||+|.+...
T Consensus 438 ~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~----~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~ 513 (710)
T 2xdw_A 438 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPN----YSVSRLIFVRHMGGVLAVANIRGGGEYGET 513 (710)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCC----CCHHHHHHHHHHCCEEEEECCTTSSTTHHH
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCc----ccHHHHHHHHhCCcEEEEEccCCCCCCChH
Confidence 3344444 455777765421 35689999999876654321 1122345667 8999999999999876321
Q ss_pred CCC----CCCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH
Q 018947 93 ISD----DEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 93 ~~~----~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (348)
... ......++|+.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..+..........
T Consensus 514 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~---- 589 (710)
T 2xdw_A 514 WHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY---- 589 (710)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS----
T ss_pred HHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcccc----
Confidence 100 01112345555555555544 24468999999999999999999999999999999987654321100
Q ss_pred HHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhc-----cC
Q 018947 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR-----KL 241 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~i 241 (348)
... ......+..+. ..+..+.+. .+ .....+. ++
T Consensus 590 ---------~~~----~~~~~~~g~~~--------~~~~~~~~~----------------~~----sp~~~~~~~~~~~~ 628 (710)
T 2xdw_A 590 ---------TIG----HAWTTDYGCSD--------SKQHFEWLI----------------KY----SPLHNVKLPEADDI 628 (710)
T ss_dssp ---------TTG----GGGHHHHCCTT--------SHHHHHHHH----------------HH----CGGGCCCCCSSTTC
T ss_pred ---------CCC----hhHHHhCCCCC--------CHHHHHHHH----------------Hh----CcHhhhcccccccC
Confidence 000 00001110000 111111111 10 1122334 67
Q ss_pred Cc-cEEEEecCCCCCC--chHHHHHHhhcc---------CCcEEEEecCCCCCcccc--ChhhhHHHHHHHHhhc
Q 018947 242 QC-RSLIFVGESSPFH--SEAVHMTSKIDR---------RYSALVEVQACGSMVTEE--QPHAMLIPMEYFLMGY 302 (348)
Q Consensus 242 ~~-Pvl~i~g~~D~~~--~~~~~~~~~~~~---------~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~~ 302 (348)
++ |+|+++|++|..+ ....++.+.++. ...++++++++||..... ++.++.+.+.+||.+.
T Consensus 629 ~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 703 (710)
T 2xdw_A 629 QYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARC 703 (710)
T ss_dssp CCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 77 9999999999988 345556666653 235899999999987763 4567888899999765
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=141.56 Aligned_cols=217 Identities=15% Similarity=0.119 Sum_probs=132.1
Q ss_pred CCceeEEEEccC------CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC------
Q 018947 28 SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD------ 95 (348)
Q Consensus 28 ~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~------ 95 (348)
.+..+.+..+-+ ...|+||++||++++...|...... ...+...|+.|+++|.+++|.+......
T Consensus 27 ~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~---~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g 103 (280)
T 3i6y_A 27 LNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGA---QRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQG 103 (280)
T ss_dssp TTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCC---HHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTT
T ss_pred cCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccH---HHHHhhCCeEEEEeCCcccccccCcccccccccC
Confidence 455666666532 3457999999999887776432111 1223345999999999988764322100
Q ss_pred -----CC------CCCC-HHHHHHHHHHHHH-HcCC-CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH
Q 018947 96 -----DE------PVLS-VDDLADQIAEVLN-HFGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (348)
Q Consensus 96 -----~~------~~~~-~~~~~~dl~~~l~-~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (348)
.. .... .+.+.+++..+++ .++. ++++++|||+||.+++.+|.++|+++++++++++........
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~- 182 (280)
T 3i6y_A 104 AGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNCP- 182 (280)
T ss_dssp CCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGSH-
T ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccCc-
Confidence 00 0012 3445577777774 4455 789999999999999999999999999999999876632211
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccC
Q 018947 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL 241 (348)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 241 (348)
+. ...+..+++... .. +.. .+....+..+
T Consensus 183 ~~-------------------~~~~~~~~~~~~--------~~--------~~~----------------~~~~~~~~~~ 211 (280)
T 3i6y_A 183 WG-------------------QKAFTAYLGKDT--------DT--------WRE----------------YDASLLMRAA 211 (280)
T ss_dssp HH-------------------HHHHHHHHCSCG--------GG--------TGG----------------GCHHHHHHHC
T ss_pred hH-------------------HHHHHHhcCCch--------HH--------HHh----------------cCHHHHHHhc
Confidence 00 011111222110 00 000 0111112222
Q ss_pred --CccEEEEecCCCCCCch---HHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 242 --QCRSLIFVGESSPFHSE---AVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 242 --~~Pvl~i~g~~D~~~~~---~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.+|+++++|++|.+++. .+.+.+.+... .++++++++++|.... ...+.+.+.+|+.+
T Consensus 212 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~ 276 (280)
T 3i6y_A 212 KQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYYF--IASFIEDHLRFHSN 276 (280)
T ss_dssp SSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred CCCccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHHH--HHHhHHHHHHHHHh
Confidence 48999999999999854 56666666543 3689999999996532 23344445555544
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.4e-19 Score=144.41 Aligned_cols=207 Identities=13% Similarity=0.034 Sum_probs=127.3
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCe--EEEEeCCCCCCCCCCC--CC------------CCCCCCCHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF--CIYHINPPGHEFGAAA--IS------------DDEPVLSVDD 104 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~--~vi~~D~~G~G~S~~~--~~------------~~~~~~~~~~ 104 (348)
..++|||+||++++...|. ..+..+...|| +|+++|.+++|.+... .+ ......++.+
T Consensus 5 ~~~pvvliHG~~~~~~~~~------~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~ 78 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSET------FMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKE 78 (249)
T ss_dssp CCEEEEEECCTTCCGGGTH------HHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHH
T ss_pred CCCcEEEECCCCCChhHHH------HHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHH
Confidence 4678999999999987754 23345556675 7999999998865211 00 0011235566
Q ss_pred HHHHHHHHH----HHcCCCceeEEEeChhHHHHHHHHHhCCC-----CcceEEEecCCCCCCChHHHHHHHHHHHHHHhh
Q 018947 105 LADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (348)
Q Consensus 105 ~~~dl~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (348)
+++++.+++ ++++.++++++||||||.+++.++.++|+ +|+++|+++++........
T Consensus 79 ~~~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~-------------- 144 (249)
T 3fle_A 79 NAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMN-------------- 144 (249)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTS--------------
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCccccc--------------
Confidence 666666655 44588999999999999999999999874 7999999998765421100
Q ss_pred ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecC----
Q 018947 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE---- 251 (348)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~---- 251 (348)
..... . ++ ..... .......+ ..+ ......++..++|+|.|+|+
T Consensus 145 -~~~~~-~----~~-~~~g~------p~~~~~~~----------------~~l---~~~~~~~p~~~~~vl~I~G~~~~~ 192 (249)
T 3fle_A 145 -ENVNE-I----IV-DKQGK------PSRMNAAY----------------RQL---LSLYKIYCGKEIEVLNIYGDLEDG 192 (249)
T ss_dssp -SCTTT-S----CB-CTTCC------BSSCCHHH----------------HHT---GGGHHHHTTTTCEEEEEEEECCSS
T ss_pred -CCcch-h----hh-cccCC------CcccCHHH----------------HHH---HHHHhhCCccCCeEEEEeccCCCC
Confidence 00000 0 00 00000 00000111 111 12234455578999999998
Q ss_pred --CCCCCch--HHHHHHhhccCC--cEEEEecC--CCCCccccChhhhHHHHHHHHh
Q 018947 252 --SSPFHSE--AVHMTSKIDRRY--SALVEVQA--CGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 252 --~D~~~~~--~~~~~~~~~~~~--~~~~~~~~--~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
.|..|+. +..+...+.+.. .+.+++.+ +.|..+.+++ ++.+.|.+||-
T Consensus 193 ~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~FLw 248 (249)
T 3fle_A 193 SHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQFLW 248 (249)
T ss_dssp SCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHHHHT
T ss_pred CCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHHHhc
Confidence 6888843 333444455422 24455654 9999998877 79999999983
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.78 E-value=4e-18 Score=163.78 Aligned_cols=233 Identities=9% Similarity=0.014 Sum_probs=138.0
Q ss_pred ccceeec-CCceeEEEEcc----CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g----~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
++..+.. +|.++.+..+. +...|+||++||.+.....+. |......++++||.|+++|+||+|.+......
T Consensus 462 ~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~----~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~ 537 (741)
T 1yr2_A 462 EQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPW----FSAGFMTWIDSGGAFALANLRGGGEYGDAWHD 537 (741)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCC----CCHHHHHHHTTTCEEEEECCTTSSTTHHHHHH
T ss_pred EEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCC----cCHHHHHHHHCCcEEEEEecCCCCCCCHHHHH
Confidence 3444554 55578777653 235789999999876654321 22233456788999999999999876321110
Q ss_pred C----CCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHH
Q 018947 96 D----EPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (348)
Q Consensus 96 ~----~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (348)
. .....++|+.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..+.........
T Consensus 538 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~-------- 609 (741)
T 1yr2_A 538 AGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQ-------- 609 (741)
T ss_dssp TTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGG--------
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccC--------
Confidence 0 0112356666666666554 2457899999999999999999999999999999988765432100
Q ss_pred HHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhcc-CCc-cEEE
Q 018947 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-LQC-RSLI 247 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~-Pvl~ 247 (348)
...... ....+..+. .++..+.+ . . ......+.. +++ |+|+
T Consensus 610 -----~~~~~~----~~~~~g~~~--------~~~~~~~~----~---------------~-~sp~~~~~~~~~~~P~Li 652 (741)
T 1yr2_A 610 -----FTAGRY----WVDDYGYPE--------KEADWRVL----R---------------R-YSPYHNVRSGVDYPAILV 652 (741)
T ss_dssp -----STTGGG----GHHHHCCTT--------SHHHHHHH----H---------------T-TCGGGCCCTTSCCCEEEE
T ss_pred -----CCCCch----hHHHcCCCC--------CHHHHHHH----H---------------H-cCchhhhhccCCCCCEEE
Confidence 000000 001110000 11111111 0 1 112233454 775 9999
Q ss_pred EecCCCCCC--chHHHHHHhhcc-----CCcEEEEecCCCCCcccc--ChhhhHHHHHHHHhhc
Q 018947 248 FVGESSPFH--SEAVHMTSKIDR-----RYSALVEVQACGSMVTEE--QPHAMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~--~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~~ 302 (348)
++|++|..+ ....++.+.++. ..+++++++++||..... ++.++.+.+.+||.+.
T Consensus 653 ~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 716 (741)
T 1yr2_A 653 TTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHF 716 (741)
T ss_dssp EECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999988 345566666654 237889999999987664 3457888999999776
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-18 Score=141.53 Aligned_cols=208 Identities=12% Similarity=0.062 Sum_probs=123.4
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL- 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~- 118 (348)
..+++|+|+||++++...|.. . ...+.. ++|+++|+||+|. .++++.++++.+..
T Consensus 15 ~~~~~l~~~hg~~~~~~~~~~------~-~~~l~~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~~~ 70 (230)
T 1jmk_C 15 DQEQIIFAFPPVLGYGLMYQN------L-SSRLPS-YKLCAFDFIEEED----------------RLDRYADLIQKLQPE 70 (230)
T ss_dssp TCSEEEEEECCTTCCGGGGHH------H-HHHCTT-EEEEEECCCCSTT----------------HHHHHHHHHHHHCCS
T ss_pred CCCCCEEEECCCCCchHHHHH------H-HHhcCC-CeEEEecCCCHHH----------------HHHHHHHHHHHhCCC
Confidence 356789999999988765431 1 345556 9999999999863 23456666666664
Q ss_pred CceeEEEeChhHHHHHHHHHhCC---CCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccccc
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
++++++|||+||.+++.+|.+.+ +++++++++++....... .+.. .. ..... ...+.. .+...
T Consensus 71 ~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~-~~~~-~~---------~~~~~-~~~~~~--~~~~~ 136 (230)
T 1jmk_C 71 GPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVS-DLDG-RT---------VESDV-EALMNV--NRDNE 136 (230)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC-------------------CCH-HHHHHH--TTTCS
T ss_pred CCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCccc-cccc-cc---------HHHHH-HHHHhc--Chhhh
Confidence 57999999999999999998764 679999999976532110 0000 00 00000 001100 00000
Q ss_pred CCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCch-HHHHHHhhccCCcEEE
Q 018947 196 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSE-AVHMTSKIDRRYSALV 274 (348)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~-~~~~~~~~~~~~~~~~ 274 (348)
.. ..+...+.+.... .....+... ......+++|+++++|++|..++. ...+.+... ...+++
T Consensus 137 ~~---~~~~~~~~~~~~~-----~~~~~~~~~-------~~~~~~~~~P~l~i~g~~D~~~~~~~~~w~~~~~-~~~~~~ 200 (230)
T 1jmk_C 137 AL---NSEAVKHGLKQKT-----HAFYSYYVN-------LISTGQVKADIDLLTSGADFDIPEWLASWEEATT-GAYRMK 200 (230)
T ss_dssp GG---GSHHHHHHHHHHH-----HHHHHHHHH-------CCCCSCBSSEEEEEECSSCCCCCTTEECSGGGBS-SCEEEE
T ss_pred hh---hhHHHHHHHHHHH-----HHHHHHhhh-------ccccccccccEEEEEeCCCCCCccccchHHHhcC-CCeEEE
Confidence 00 0111111111100 000001000 013467899999999999988742 222333332 247889
Q ss_pred EecCCCC--CccccChhhhHHHHHHHHhhc
Q 018947 275 EVQACGS--MVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 275 ~~~~~gH--~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+++ || ++..++++.+++.|.+||.+.
T Consensus 201 ~i~g-~H~~~~~~~~~~~~~~~i~~~l~~~ 229 (230)
T 1jmk_C 201 RGFG-THAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp ECSS-CGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred EecC-ChHHHcCcHhHHHHHHHHHHHHhhc
Confidence 9985 99 888789999999999999763
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-18 Score=141.17 Aligned_cols=197 Identities=13% Similarity=0.076 Sum_probs=124.5
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCC---------------------CCCCCCCCCC--CC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPP---------------------GHEFGAAAIS--DD 96 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~---------------------G~G~S~~~~~--~~ 96 (348)
.+|+|||+||++++...|.... ..+...+ ..||+|+++|+| |+|.+..-.. ..
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~---~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~ 80 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKS---SGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEI 80 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHT---HHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSS
T ss_pred cCceEEEeCCCCccHHHHHHHH---HHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCC
Confidence 5689999999999987753222 0112333 349999999999 4454321100 00
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCC------CCcceEEEecCCCCCCChHHHHHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR------HRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (348)
....++.+.++.+.+.++..+ ++++|+||||||.+|+.+|.+++ ..++.++++++........
T Consensus 81 ~~~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~---------- 149 (243)
T 1ycd_A 81 SHELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP---------- 149 (243)
T ss_dssp GGGCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT----------
T ss_pred cchhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc----------
Confidence 123567788888888776654 67899999999999999998753 2466777766543211000
Q ss_pred HHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEec
Q 018947 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 250 (348)
...+. ... ... + . +....+.++++|+++++|
T Consensus 150 --~~~~~---------------~~~------~~~----------------~-------~---~~~~~~~~~~~P~l~i~G 180 (243)
T 1ycd_A 150 --EHPGE---------------LRI------TEK----------------F-------R---DSFAVKPDMKTKMIFIYG 180 (243)
T ss_dssp --TSTTC---------------EEE------CGG----------------G-------T---TTTCCCTTCCCEEEEEEE
T ss_pred --ccccc---------------ccc------chh----------------H-------H---HhccCcccCCCCEEEEEe
Confidence 00000 000 000 0 0 000124568899999999
Q ss_pred CCCCCCc--hHHHHHHhhccC-----CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 251 ESSPFHS--EAVHMTSKIDRR-----YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 251 ~~D~~~~--~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++|.+++ ....+.+.+++. ....++++++||+...+ +.+.+.|.+||++.
T Consensus 181 ~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~~~ 237 (243)
T 1ycd_A 181 ASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK--KDIIRPIVEQITSS 237 (243)
T ss_dssp TTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC--HHHHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch--HHHHHHHHHHHHHh
Confidence 9999984 455677777652 12566777899987755 35999999999876
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-17 Score=137.85 Aligned_cols=205 Identities=13% Similarity=0.049 Sum_probs=131.7
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc---
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF--- 116 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l--- 116 (348)
..|+||++||++++...|.... .+..++. .|+.|+.+|.++++.+..+ ......+.+++++..+++..
T Consensus 40 ~~p~vv~~HG~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~ 111 (263)
T 2uz0_A 40 DIPVLYLLHGMSGNHNSWLKRT----NVERLLRGTNLIVVMPNTSNGWYTDTQ----YGFDYYTALAEELPQVLKRFFPN 111 (263)
T ss_dssp CBCEEEEECCTTCCTTHHHHHS----CHHHHTTTCCCEEEECCCTTSTTSBCT----TSCBHHHHHHTHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCHHHHHhcc----CHHHHHhcCCeEEEEECCCCCccccCC----CcccHHHHHHHHHHHHHHHHhcc
Confidence 4589999999998887664311 1134443 6899999999998876533 12233677788888888774
Q ss_pred -C--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccc
Q 018947 117 -G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE 193 (348)
Q Consensus 117 -~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (348)
. .++++++|||+||.+++.+|. +|+++++++++++........... ... .. ......++...
T Consensus 112 ~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~~-----------~~~-~~--~~~~~~~~~~~ 176 (263)
T 2uz0_A 112 MTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPES-----------QNL-GS--PAYWRGVFGEI 176 (263)
T ss_dssp BCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGGG-----------TTC-SC--HHHHHHHHCCC
T ss_pred ccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccccc-----------ccc-cc--chhHHHHcCCh
Confidence 2 368999999999999999999 999999999999887653311000 000 00 01111222211
Q ss_pred ccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCC--ccEEEEecCCCCCCchHHHHHHhhccCC-
Q 018947 194 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ--CRSLIFVGESSPFHSEAVHMTSKIDRRY- 270 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvl~i~g~~D~~~~~~~~~~~~~~~~~- 270 (348)
.... ....+....+.++. +|+++++|++|.+++....+.+.+...+
T Consensus 177 ~~~~-------------------------------~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~l~~~g~ 225 (263)
T 2uz0_A 177 RDWT-------------------------------TSPYSLESLAKKSDKKTKLWAWCGEQDFLYEANNLAVKNLKKLGF 225 (263)
T ss_dssp SCTT-------------------------------TSTTSHHHHGGGCCSCSEEEEEEETTSTTHHHHHHHHHHHHHTTC
T ss_pred hhhc-------------------------------cccCCHHHHHHhccCCCeEEEEeCCCchhhHHHHHHHHHHHHCCC
Confidence 1000 00112222333443 7999999999998866667777766533
Q ss_pred -cEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 271 -SALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 271 -~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+++++++ ||.... .++..+.+.+||.+.
T Consensus 226 ~~~~~~~~g-~H~~~~--~~~~~~~~~~~l~~~ 255 (263)
T 2uz0_A 226 DVTYSHSAG-THEWYY--WEKQLEVFLTTLPID 255 (263)
T ss_dssp EEEEEEESC-CSSHHH--HHHHHHHHHHHSSSC
T ss_pred CeEEEECCC-CcCHHH--HHHHHHHHHHHHHhh
Confidence 68889998 997542 235567777888664
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.4e-18 Score=146.74 Aligned_cols=231 Identities=14% Similarity=0.132 Sum_probs=135.5
Q ss_pred ccceeecCCc-eeEEEEccC--CCCCeEEEeCCCCC---Chhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHG-SLSVTIYGD--QDKPALVTYPDLAL---NYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 21 ~~~~v~~~~~-~l~~~~~g~--~~~p~vvllHG~~~---~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~ 93 (348)
+...+...+| .+.+..+.+ ...|+||++||.|. +...+. .....+. ..||.|+++|+|+.++...
T Consensus 61 ~~~~i~~~~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~~~~------~~~~~la~~~g~~vv~~dyr~~p~~~~-- 132 (317)
T 3qh4_A 61 ADDVVTGEAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDH------RQCLELARRARCAVVSVDYRLAPEHPY-- 132 (317)
T ss_dssp EEEEEECTTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTTTH------HHHHHHHHHHTSEEEEECCCCTTTSCT--
T ss_pred EEEEecCCCCCeEEEEEEecCCCCCcEEEEECCCcCccCChHHHH------HHHHHHHHHcCCEEEEecCCCCCCCCC--
Confidence 4445666555 777766643 45689999998773 322221 2224454 3499999999998765421
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH---cCC--CceeEEEeChhHHHHHHHHHhCCC----CcceEEEecCCCCCCChHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNH---FGL--GAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWLY 164 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~---l~~--~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~ 164 (348)
...++|..+.+..+.+. +++ ++++++|||+||.+++.+|.++++ .++++++++|...........
T Consensus 133 -----p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~- 206 (317)
T 3qh4_A 133 -----PAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRS- 206 (317)
T ss_dssp -----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHHH-
T ss_pred -----chHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCCcCHH-
Confidence 23345554444444432 454 589999999999999999987665 499999999987754111100
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCcc
Q 018947 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (348)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 244 (348)
. ....... .......+............ . ........+.. -.|
T Consensus 207 -~--------~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~------~-~~p~~~~~l~~-lpP 249 (317)
T 3qh4_A 207 -E--------FRATPAF--------------------DGEAASLMWRHYLAGQTPSP------E-SVPGRRGQLAG-LPA 249 (317)
T ss_dssp -H--------TTTCSSS--------------------CHHHHHHHHHHHHTTCCCCT------T-TCGGGCSCCTT-CCC
T ss_pred -H--------hcCCCCc--------------------CHHHHHHHHHHhcCCCCCCc------c-cCCCcccccCC-CCc
Confidence 0 0000000 11111111111110000000 0 00000011111 149
Q ss_pred EEEEecCCCCCCchHHHHHHhhccC--CcEEEEecCCCCC-----ccccChhhhHHHHHHHHhhc
Q 018947 245 SLIFVGESSPFHSEAVHMTSKIDRR--YSALVEVQACGSM-----VTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 245 vl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~-----~~~e~p~~~~~~i~~fl~~~ 302 (348)
+++++|+.|.+++....+++++... .++++++++++|. ...+.++++.+.+.+||++.
T Consensus 250 ~li~~G~~D~~~~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~ 314 (317)
T 3qh4_A 250 TLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADA 314 (317)
T ss_dssp EEEEEEEESTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHH
T ss_pred eeEEecCcCCCchhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHH
Confidence 9999999999986556665555432 3799999999997 34466788999999999875
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.77 E-value=7.7e-19 Score=148.14 Aligned_cols=105 Identities=15% Similarity=0.190 Sum_probs=77.0
Q ss_pred CCCeEEEeCCCCCCh---hhhccccccchhhhhhccC---CeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNY---MSCFQGLFFCPEACSLLLH---NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN 114 (348)
Q Consensus 41 ~~p~vvllHG~~~~~---~~~~~~~~~~~~~~~~~~~---g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~ 114 (348)
..++|||+||++++. ..|.. . ...+++ |++|+++|+ |||.|..... ....++.+.++++.+.++
T Consensus 4 ~~~pvVllHG~~~~~~~~~~~~~------~-~~~L~~~~~g~~v~~~d~-G~g~s~~~~~--~~~~~~~~~~~~~~~~l~ 73 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPLSMGA------I-KKMVEKKIPGIHVLSLEI-GKTLREDVEN--SFFLNVNSQVTTVCQILA 73 (279)
T ss_dssp SSCCEEEECCTTCCSCCTTTTHH------H-HHHHHHHSTTCCEEECCC-SSSHHHHHHH--HHHSCHHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCCcccHHH------H-HHHHHHHCCCcEEEEEEe-CCCCcccccc--ccccCHHHHHHHHHHHHH
Confidence 456799999999886 44422 1 233332 779999998 9997742100 012467788888887776
Q ss_pred HcC-C-CceeEEEeChhHHHHHHHHHhCCCC-cceEEEecCCCC
Q 018947 115 HFG-L-GAVMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCK 155 (348)
Q Consensus 115 ~l~-~-~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 155 (348)
.+. . ++++++||||||.++..++.++|++ |+++|+++++..
T Consensus 74 ~~~~l~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~ 117 (279)
T 1ei9_A 74 KDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp SCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred hhhhccCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCccC
Confidence 532 1 7899999999999999999999985 999999986543
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-17 Score=144.93 Aligned_cols=223 Identities=13% Similarity=0.016 Sum_probs=127.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccC-CeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH---- 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---- 115 (348)
..|+||++||.+........ ..|......+..+ ||.|+++|+|+.+... ....++|..+.+..+.+.
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~-~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~-------~~~~~~D~~~a~~~l~~~~~~~ 182 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASS-TIYDSLCRRFVKLSKGVVVSVNYRRAPEHR-------YPCAYDDGWTALKWVMSQPFMR 182 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTB-HHHHHHHHHHHHHHTSEEEEECCCCTTTSC-------TTHHHHHHHHHHHHHHHCTTTE
T ss_pred cceEEEEEcCCccccCCCch-hhHHHHHHHHHHHCCCEEEEeeCCCCCCCC-------CcHHHHHHHHHHHHHHhCchhh
Confidence 45899999997643211110 0011223455554 9999999999875432 112344554444444422
Q ss_pred --cCCC-ceeEEEeChhHHHHHHHHHhCCC---CcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhh
Q 018947 116 --FGLG-AVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRY 189 (348)
Q Consensus 116 --l~~~-~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (348)
.+.+ +++|+|||+||.+++.+|.+.++ +++++|+++|.............. ......
T Consensus 183 ~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~------~~~~~~----------- 245 (365)
T 3ebl_A 183 SGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRL------DGKYFV----------- 245 (365)
T ss_dssp ETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHH------TTTSSC-----------
T ss_pred hCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhc------CCCccc-----------
Confidence 2345 89999999999999999998766 799999999987654322111000 000000
Q ss_pred hcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCC-ccEEEEecCCCCCCchHHHHHHhhcc
Q 018947 190 FSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ-CRSLIFVGESSPFHSEAVHMTSKIDR 268 (348)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~ 268 (348)
.......+............... ..........+..+. .|+|+++|++|.+++....+.+.+..
T Consensus 246 ------------~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~ 310 (365)
T 3ebl_A 246 ------------TLQDRDWYWKAYLPEDADRDHPA---CNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALRE 310 (365)
T ss_dssp ------------CHHHHHHHHHHHSCTTCCTTSTT---TCTTSTTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHhCCCCCCCCCcc---cCCCCCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHHH
Confidence 01111111111000000000000 000000111222222 48999999999887666666666654
Q ss_pred C--CcEEEEecCCCCCcc----ccChhhhHHHHHHHHhhcc
Q 018947 269 R--YSALVEVQACGSMVT----EEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 269 ~--~~~~~~~~~~gH~~~----~e~p~~~~~~i~~fl~~~~ 303 (348)
. .++++++++++|..+ .++.+++.+.|.+||++..
T Consensus 311 ~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~ 351 (365)
T 3ebl_A 311 DGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANL 351 (365)
T ss_dssp TTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhh
Confidence 3 378999999999765 4567789999999998874
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=6.2e-18 Score=143.19 Aligned_cols=126 Identities=14% Similarity=0.181 Sum_probs=84.1
Q ss_pred CCceeEEEEccC-----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCC--CCCCCCCCCCC------
Q 018947 28 SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP--PGHEFGAAAIS------ 94 (348)
Q Consensus 28 ~~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~--~G~G~S~~~~~------ 94 (348)
.+..+.+..+-+ ...|+||++||.+++...|.... .....+...||.|+++|. ||+|.+.....
T Consensus 26 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~---~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~ 102 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKS---GYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTG 102 (282)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHHHHHHS---CCHHHHHHHTCEEEEECSCSSCCCC--------CCCC
T ss_pred cCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccchhhcc---hHHHHhhcCCeEEEEeccccCccccccccccccccCC
Confidence 455666665532 34579999999999887764322 111344467999999999 77664321100
Q ss_pred ----CCCCC-------CCHHHHHHHHHHHHH-HcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 95 ----DDEPV-------LSVDDLADQIAEVLN-HFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 95 ----~~~~~-------~~~~~~~~dl~~~l~-~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
..... ......++++..+++ .+++ ++++++|||+||.+++.+|.++|+++++++++++....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~ 178 (282)
T 3fcx_A 103 AGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNP 178 (282)
T ss_dssp CCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCG
T ss_pred cccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCc
Confidence 00000 112345557777776 5554 68999999999999999999999999999999987753
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=135.53 Aligned_cols=217 Identities=11% Similarity=0.086 Sum_probs=130.1
Q ss_pred CCceeEEEEccC------CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC------
Q 018947 28 SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD------ 95 (348)
Q Consensus 28 ~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~------ 95 (348)
.+..+.+..+-+ ...|+||++||++++...|...... ...+...|+.|+++|.+++|.+......
T Consensus 25 ~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~---~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g 101 (280)
T 3ls2_A 25 THCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGA---FKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQG 101 (280)
T ss_dssp TTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCC---HHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTT
T ss_pred cCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhH---HHHHhhCCeEEEEeCCcccccccccccccccccC
Confidence 455676666533 2347999999999988776332211 1223345999999999877765322100
Q ss_pred -----------CCCCCC-HHHHHHHHHHHHHHc-CC-CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH
Q 018947 96 -----------DEPVLS-VDDLADQIAEVLNHF-GL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (348)
Q Consensus 96 -----------~~~~~~-~~~~~~dl~~~l~~l-~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (348)
...... .+.+.+++..+++.. .. ++++++|||+||.+++.+|.++|+++++++++++........
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~- 180 (280)
T 3ls2_A 102 AGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCP- 180 (280)
T ss_dssp CCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSH-
T ss_pred CccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCc-
Confidence 000112 344556777776543 33 689999999999999999999999999999999876632210
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhcc-
Q 018947 162 WLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK- 240 (348)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 240 (348)
+. ...+..+++... .. +.. .+....+.+
T Consensus 181 ~~-------------------~~~~~~~~g~~~--------~~--------~~~----------------~~~~~~~~~~ 209 (280)
T 3ls2_A 181 WG-------------------VKAFTGYLGADK--------TT--------WAQ----------------YDSCKLMAKA 209 (280)
T ss_dssp HH-------------------HHHHHHHHCSCG--------GG--------TGG----------------GCHHHHHHTC
T ss_pred ch-------------------hhHHHhhcCchH--------HH--------HHh----------------cCHHHHHHhc
Confidence 00 001111222110 00 000 011111112
Q ss_pred ---CCccEEEEecCCCCCCch---HHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 241 ---LQCRSLIFVGESSPFHSE---AVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 241 ---i~~Pvl~i~g~~D~~~~~---~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
..+|+++++|++|.+++. ...+.+.+... .++++++++++|.... .....+...+|+.+
T Consensus 210 ~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~~~~ 276 (280)
T 3ls2_A 210 EQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYFF--ISSFIDQHLVFHHQ 276 (280)
T ss_dssp CGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred cccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchhh--HHHHHHHHHHHHHH
Confidence 357999999999999854 55666555532 3799999999997543 22334444456654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6.6e-17 Score=154.04 Aligned_cols=232 Identities=7% Similarity=-0.013 Sum_probs=137.3
Q ss_pred cceeec-CCceeEEEEcc------CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 22 DNLIKT-SHGSLSVTIYG------DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 22 ~~~v~~-~~~~l~~~~~g------~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
+..+.. +|.++.+..+. +...|+||++||.......+. |......++.+||.|+++|+||+|.......
T Consensus 427 ~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~----~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 502 (693)
T 3iuj_A 427 QRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPS----FSVSVANWLDLGGVYAVANLRGGGEYGQAWH 502 (693)
T ss_dssp EEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCC----CCHHHHHHHHTTCEEEEECCTTSSTTCHHHH
T ss_pred EEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCc----cCHHHHHHHHCCCEEEEEeCCCCCccCHHHH
Confidence 334444 45567666542 135689999999866543321 2223356778999999999999886532110
Q ss_pred C----CCCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHH
Q 018947 95 D----DEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (348)
Q Consensus 95 ~----~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (348)
. ......++|+.+.+..+++. .+.+++.++|||+||++++.++.++|++++++|+..+.........
T Consensus 503 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~------- 575 (693)
T 3iuj_A 503 LAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHT------- 575 (693)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGG-------
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhcc-------
Confidence 0 01112345666555555554 2336899999999999999999999999999999988776432110
Q ss_pred HHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHH-HHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhcc-CCcc-E
Q 018947 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDI-VQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-LQCR-S 245 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P-v 245 (348)
.... ......+ +... ..+. .+.+ .. ......+.. +++| +
T Consensus 576 ------~~~~----~~~~~~~-g~p~-------~~~~~~~~~----------------~~----~sp~~~~~~~~~~Pp~ 617 (693)
T 3iuj_A 576 ------FTAG----TGWAYDY-GTSA-------DSEAMFDYL----------------KG----YSPLHNVRPGVSYPST 617 (693)
T ss_dssp ------SGGG----GGCHHHH-CCTT-------SCHHHHHHH----------------HH----HCHHHHCCTTCCCCEE
T ss_pred ------CCCc----hhHHHHc-CCcc-------CHHHHHHHH----------------Hh----cCHHHhhcccCCCCce
Confidence 0000 0000111 1110 1111 1111 11 122234555 7887 9
Q ss_pred EEEecCCCCCC--chHHHHHHhhccC-----CcEEEEecCCCCCccc--cChhhhHHHHHHHHhhc
Q 018947 246 LIFVGESSPFH--SEAVHMTSKIDRR-----YSALVEVQACGSMVTE--EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 246 l~i~g~~D~~~--~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~--e~p~~~~~~i~~fl~~~ 302 (348)
|+++|++|..+ ....++.+.+... ..++++++++||.... ++..+..+.+.+||.+.
T Consensus 618 Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 683 (693)
T 3iuj_A 618 MVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYE 683 (693)
T ss_dssp EEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 99999999988 3455566666542 3689999999998765 45667788889999875
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-16 Score=140.81 Aligned_cols=114 Identities=15% Similarity=-0.002 Sum_probs=77.4
Q ss_pred CCCeEEEeCCCCCChhhhc-----cccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC-----CCCHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCF-----QGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP-----VLSVDDLADQIA 110 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~-----~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~-----~~~~~~~~~dl~ 110 (348)
..|+||++||++++...+. ....+...+..++++||.|+++|+||||.|...... .. ...+.+.++++.
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~-~~~~~~~~~~~~d~~~~~~ 156 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHP-YLHSASEASATIDAMRAAR 156 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCC-TTCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccc-hhhhhhHHHHHHHHHHHHH
Confidence 4578999999998765411 011133455677789999999999999998633111 11 024556667777
Q ss_pred HHHHHcCC---CceeEEEeChhHHHHHHHHHh-CCC-----CcceEEEecCCCC
Q 018947 111 EVLNHFGL---GAVMCMGVTAGAYILTLFAMK-YRH-----RVLGLILVSPLCK 155 (348)
Q Consensus 111 ~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~-~p~-----~v~~lvl~~~~~~ 155 (348)
.+++++++ ++++++||||||.+++.+|.. .++ .+.+++..++...
T Consensus 157 ~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 157 SVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYA 210 (397)
T ss_dssp HHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSS
T ss_pred HHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccccc
Confidence 78888877 689999999999999987732 221 4666666555443
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.72 E-value=5.9e-17 Score=120.78 Aligned_cols=100 Identities=14% Similarity=0.097 Sum_probs=82.1
Q ss_pred cceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
..++..++.+++|...| .+|+|||+| .+...|. . . +.++|+|+++|+||||.|..+.. .
T Consensus 4 ~~~~~~~g~~~~~~~~g--~~~~vv~~H---~~~~~~~------~---~-l~~~~~v~~~d~~G~G~s~~~~~-----~- 62 (131)
T 2dst_A 4 AGYLHLYGLNLVFDRVG--KGPPVLLVA---EEASRWP------E---A-LPEGYAFYLLDLPGYGRTEGPRM-----A- 62 (131)
T ss_dssp EEEEEETTEEEEEEEEC--CSSEEEEES---SSGGGCC------S---C-CCTTSEEEEECCTTSTTCCCCCC-----C-
T ss_pred eEEEEECCEEEEEEEcC--CCCeEEEEc---CCHHHHH------H---H-HhCCcEEEEECCCCCCCCCCCCC-----C-
Confidence 45667788999999888 478999999 3333322 1 1 56679999999999999875421 2
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCC
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (348)
++++++++.++++.++.++++++||||||.+++.+|.++|.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 63 PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999884
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3.1e-16 Score=138.72 Aligned_cols=194 Identities=9% Similarity=0.064 Sum_probs=128.3
Q ss_pred CCceeEEEEccCC------CCCeEEEeCCCCCChhhhcccccc------chhhhhhccCCeEEEEeCCCCCCCCCCCCC-
Q 018947 28 SHGSLSVTIYGDQ------DKPALVTYPDLALNYMSCFQGLFF------CPEACSLLLHNFCIYHINPPGHEFGAAAIS- 94 (348)
Q Consensus 28 ~~~~l~~~~~g~~------~~p~vvllHG~~~~~~~~~~~~~~------~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~- 94 (348)
+|..+.|..+.+. ..|+||++||.+.+...+....+. +.........++.|+++|.||.+.......
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~~~~ 233 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTD 233 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTTTTC
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcccccccc
Confidence 4568888776432 237899999998765432111100 000011235678999999998764322111
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHcCCC--ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHH
Q 018947 95 ---DDEPVLSVDDLADQIAEVLNHFGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (348)
Q Consensus 95 ---~~~~~~~~~~~~~dl~~~l~~l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (348)
........+++.+.+..+++.++++ +++++|||+||.+++.++.++|+++++++++++...
T Consensus 234 ~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~-------------- 299 (380)
T 3doh_A 234 RENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD-------------- 299 (380)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC--------------
T ss_pred cccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCC--------------
Confidence 1111345677777888888887764 799999999999999999999999999999988740
Q ss_pred HHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccC-CccEEEE
Q 018947 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLIF 248 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i 248 (348)
. ..+..+ .+|+|++
T Consensus 300 --------------------------------------------------------------~---~~~~~~~~~P~lii 314 (380)
T 3doh_A 300 --------------------------------------------------------------V---SKVERIKDIPIWVF 314 (380)
T ss_dssp --------------------------------------------------------------G---GGGGGGTTSCEEEE
T ss_pred --------------------------------------------------------------h---hhhhhccCCCEEEE
Confidence 0 011223 3899999
Q ss_pred ecCCCCCC--chHHHHHHhhccC--CcEEEEecCC--------CCCccccChhhhHHHHHHHHhhc
Q 018947 249 VGESSPFH--SEAVHMTSKIDRR--YSALVEVQAC--------GSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 249 ~g~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~--------gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+|++|..+ .....+.+.+... ..++++++++ +|....+ ..-.+.+.+||.+.
T Consensus 315 ~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~--~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 315 HAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIP--TYENQEAIEWLFEQ 378 (380)
T ss_dssp EETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHH--HHTCHHHHHHHHTC
T ss_pred ecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHH--hcCCHHHHHHHHhh
Confidence 99999998 3455677766642 3789999999 7753221 11123788888764
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.72 E-value=9.3e-17 Score=154.04 Aligned_cols=236 Identities=11% Similarity=0.039 Sum_probs=140.7
Q ss_pred ccceeec-CCceeEEEEc---c---CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIY---G---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~---g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
+...+.. +|.++++..+ + +...|+||++||........ .|......++.+||.|+++|+||+|.+....
T Consensus 481 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~----~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~ 556 (751)
T 2xe4_A 481 ERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDP----QFSIQHLPYCDRGMIFAIAHIRGGSELGRAW 556 (751)
T ss_dssp EEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCC----CCCGGGHHHHTTTCEEEEECCTTSCTTCTHH
T ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCC----cchHHHHHHHhCCcEEEEEeeCCCCCcCcch
Confidence 3344454 4556765443 2 13568999999976654321 1222334667789999999999998753211
Q ss_pred C-----CCCCCCCHHHHHHHHHHHHHH--cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH
Q 018947 94 S-----DDEPVLSVDDLADQIAEVLNH--FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 94 ~-----~~~~~~~~~~~~~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (348)
. .......++|+++.+..+++. .+.+++.++|+|+||++++.++.++|++++++|+..+..... ...
T Consensus 557 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~---~~~--- 630 (751)
T 2xe4_A 557 YEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVM---TTM--- 630 (751)
T ss_dssp HHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHH---HHH---
T ss_pred hhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHH---hhh---
Confidence 0 001124567777777766665 344789999999999999999999999999999998865421 000
Q ss_pred HHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCcc-E
Q 018947 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR-S 245 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-v 245 (348)
. ....... ...+ ... ... ...+..+. +..+ .....+.++++| +
T Consensus 631 ------~-~~~~~~~----~~~~--~~~-g~p--~~~~~~~~----------------~~~~----sp~~~~~~~~~Pp~ 674 (751)
T 2xe4_A 631 ------C-DPSIPLT----TGEW--EEW-GNP--NEYKYYDY----------------MLSY----SPMDNVRAQEYPNI 674 (751)
T ss_dssp ------T-CTTSTTH----HHHT--TTT-CCT--TSHHHHHH----------------HHHH----CTGGGCCSSCCCEE
T ss_pred ------c-ccCcccc----hhhH--HHc-CCC--CCHHHHHH----------------HHhc----ChhhhhccCCCCce
Confidence 0 0000000 0011 000 000 01111111 1111 122345568897 9
Q ss_pred EEEecCCCCCC--chHHHHHHhhccCC-----cEEEEecCCCCCccccChh--hhHHHHHHHHhhc
Q 018947 246 LIFVGESSPFH--SEAVHMTSKIDRRY-----SALVEVQACGSMVTEEQPH--AMLIPMEYFLMGY 302 (348)
Q Consensus 246 l~i~g~~D~~~--~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~e~p~--~~~~~i~~fl~~~ 302 (348)
|+++|++|..+ ....++.+.+...+ ..+.+++++||....+.++ +..+.+.+||.+.
T Consensus 675 Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~ 740 (751)
T 2xe4_A 675 MVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKH 740 (751)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred eEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHH
Confidence 99999999988 34556666665421 2455559999998765544 3445788898776
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-17 Score=147.10 Aligned_cols=178 Identities=12% Similarity=0.057 Sum_probs=116.9
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC-------------------CCC---
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-------------------DEP--- 98 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~-------------------~~~--- 98 (348)
..|+|||+||++++...+. ..+..+.++||.|+++|+||+|.|...... ...
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~------~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 170 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYS------AIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETH 170 (383)
T ss_dssp CEEEEEEECCTTCCTTTTH------HHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHH------HHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchh
Confidence 4578999999998875532 233566778999999999999876421000 000
Q ss_pred --CCCHHHHHHHHHHHHHHc--------------------------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEe
Q 018947 99 --VLSVDDLADQIAEVLNHF--------------------------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILV 150 (348)
Q Consensus 99 --~~~~~~~~~dl~~~l~~l--------------------------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 150 (348)
...++..++|+..+++.+ +.+++.++|||+||.+++.++.+.+ +|+++|++
T Consensus 171 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~ 249 (383)
T 3d59_A 171 IRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIAL 249 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEe
Confidence 011222345655555432 2357999999999999999887765 69999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcC
Q 018947 151 SPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAING 230 (348)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (348)
++..... ..
T Consensus 250 ~~~~~p~--------------------------------------------~~--------------------------- 258 (383)
T 3d59_A 250 DAWMFPL--------------------------------------------GD--------------------------- 258 (383)
T ss_dssp SCCCTTC--------------------------------------------CG---------------------------
T ss_pred CCccCCC--------------------------------------------ch---------------------------
Confidence 8643210 00
Q ss_pred CccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhcc--CCcEEEEecCCCCCcccc-------------------Ch-
Q 018947 231 RPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDR--RYSALVEVQACGSMVTEE-------------------QP- 288 (348)
Q Consensus 231 ~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-------------------~p- 288 (348)
+.+.++++|+|+++|++|...+....+ +.+.. ...+++++++++|..+.+ +|
T Consensus 259 -----~~~~~i~~P~Lii~g~~D~~~~~~~~~-~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~ 332 (383)
T 3d59_A 259 -----EVYSRIPQPLFFINSEYFQYPANIIKM-KKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSN 332 (383)
T ss_dssp -----GGGGSCCSCEEEEEETTTCCHHHHHHH-HTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHH
T ss_pred -----hhhccCCCCEEEEecccccchhhHHHH-HHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHH
Confidence 012467899999999999865433333 33321 237899999999987432 34
Q ss_pred ---hhhHHHHHHHHhhc
Q 018947 289 ---HAMLIPMEYFLMGY 302 (348)
Q Consensus 289 ---~~~~~~i~~fl~~~ 302 (348)
+.+.+.+.+||++.
T Consensus 333 ~~~~~~~~~~~~Fl~~~ 349 (383)
T 3d59_A 333 VAIDLSNKASLAFLQKH 349 (383)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33445788899876
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-16 Score=132.73 Aligned_cols=204 Identities=12% Similarity=0.039 Sum_probs=128.5
Q ss_pred CCceeEEEEccC------CCCCeEEEeCCCCCChhhhccc-cccchhhhhhccC----CeEEEEeCCCCCCCCCCCCCCC
Q 018947 28 SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQG-LFFCPEACSLLLH----NFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 28 ~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~-~~~~~~~~~~~~~----g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
.+..+.+..+-+ ...|+||++||.+++...|... ..+...+..+.+. +|.|+++|.+++|.+...
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~---- 117 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD---- 117 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSC----
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccc----
Confidence 344566655532 2458999999999887666432 1011112344443 699999999998754210
Q ss_pred CCCCCHHHHHHHHHHHHH-HcCC----CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLN-HFGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~-~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
......+++++++..+++ .++. ++++++|||+||.+++.++.++|+++++++++++........
T Consensus 118 ~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~----------- 186 (268)
T 1jjf_A 118 GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNE----------- 186 (268)
T ss_dssp HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHH-----------
T ss_pred cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCchh-----------
Confidence 000011233555555554 4443 689999999999999999999999999999999865432110
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCc-cEEEEec
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC-RSLIFVG 250 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvl~i~g 250 (348)
..+.. ... ...... |+++++|
T Consensus 187 ----------------~~~~~---------~~~---------------------------------~~~~~~pp~li~~G 208 (268)
T 1jjf_A 187 ----------------RLFPD---------GGK---------------------------------AAREKLKLLFIACG 208 (268)
T ss_dssp ----------------HHCTT---------TTH---------------------------------HHHHHCSEEEEEEE
T ss_pred ----------------hhcCc---------chh---------------------------------hhhhcCceEEEEec
Confidence 00000 000 001123 4999999
Q ss_pred CCCCCCchHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhhccccC
Q 018947 251 ESSPFHSEAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYR 306 (348)
Q Consensus 251 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 306 (348)
++|.+++....+.+.+... ..+++++++++|.... .......+.+||.+.++..
T Consensus 209 ~~D~~v~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~l~~~~~~~ 264 (268)
T 1jjf_A 209 TNDSLIGFGQRVHEYCVANNINHVYWLIQGGGHDFNV--WKPGLWNFLQMADEAGLTR 264 (268)
T ss_dssp TTCTTHHHHHHHHHHHHHTTCCCEEEEETTCCSSHHH--HHHHHHHHHHHHHHHTTTC
T ss_pred CCCCCccHHHHHHHHHHHCCCceEEEEcCCCCcCHhH--HHHHHHHHHHHHHhcCccc
Confidence 9999887666666665542 3789999999997643 2234466778888877533
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.9e-16 Score=147.06 Aligned_cols=217 Identities=10% Similarity=0.037 Sum_probs=123.3
Q ss_pred hhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC--------------------CceeEEEeCh
Q 018947 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL--------------------GAVMCMGVTA 128 (348)
Q Consensus 69 ~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~--------------------~~v~lvGhS~ 128 (348)
..++++||.|+++|.||+|.|+... ..+.. +.++|+.++++.+.. .+|.++||||
T Consensus 275 ~~la~~GYaVv~~D~RG~G~S~G~~----~~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~Sy 349 (763)
T 1lns_A 275 DYFLTRGFASIYVAGVGTRSSDGFQ----TSGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 349 (763)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCC----CTTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred HHHHHCCCEEEEECCCcCCCCCCcC----CCCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECH
Confidence 4577899999999999999997441 22333 567888888887762 4799999999
Q ss_pred hHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHH
Q 018947 129 GAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQA 208 (348)
Q Consensus 129 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (348)
||.+++.+|+.+|++++++|..++... +.... .... ......+........+....+........ .....+.
T Consensus 350 GG~ial~~Aa~~p~~lkaiV~~~~~~d---~~~~~-~~~g-~~~~~~g~~~~~~~~l~~~~~~~~~~~g~---~~~~~~~ 421 (763)
T 1lns_A 350 LGTMAYGAATTGVEGLELILAEAGISS---WYNYY-RENG-LVRSPGGFPGEDLDVLAALTYSRNLDGAD---FLKGNAE 421 (763)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCSB---HHHHH-BSSS-SBCCCTTCTTCCHHHHHHHHCGGGGSHHH---HHHHHHH
T ss_pred HHHHHHHHHHhCCcccEEEEEeccccc---HHHHh-hhcc-hhhhcccCCchhhhHHhHHHHhhhcCcch---hhhHHHH
Confidence 999999999999999999999987652 11100 0000 00000000000000000001110000000 0000000
Q ss_pred HH---HHHhh-h--chhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCC
Q 018947 209 CR---RLLDE-R--QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACG 280 (348)
Q Consensus 209 ~~---~~~~~-~--~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~g 280 (348)
+. ..+.. . .......++. ..+....+.+|++|+|+++|..|..++ ....+.+.++.......++.++|
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~w~----~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i~~~g 497 (763)
T 1lns_A 422 YEKRLAEMTAALDRKSGDYNQFWH----DRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGA 497 (763)
T ss_dssp HHHHHHHHHHHHCTTTCCCCHHHH----TTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEESCS
T ss_pred HHHHHHHHHhhhhhccCchhHHhh----ccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEEeCCc
Confidence 10 00000 0 0000001111 124456788999999999999999883 55667888874113345567899
Q ss_pred CCcccc-ChhhhHHHHHHHHhhc
Q 018947 281 SMVTEE-QPHAMLIPMEYFLMGY 302 (348)
Q Consensus 281 H~~~~e-~p~~~~~~i~~fl~~~ 302 (348)
|..+.+ .+..+.+.+.+||++.
T Consensus 498 H~~~~~~~~~~~~~~i~~Ffd~~ 520 (763)
T 1lns_A 498 HIYMNSWQSIDFSETINAYFVAK 520 (763)
T ss_dssp SCCCTTBSSCCHHHHHHHHHHHH
T ss_pred ccCccccchHHHHHHHHHHHHHH
Confidence 987655 5666777888887654
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.71 E-value=3e-16 Score=134.50 Aligned_cols=121 Identities=13% Similarity=0.084 Sum_probs=83.7
Q ss_pred cCCceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCC------------CC--CC
Q 018947 27 TSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP------------GH--EF 88 (348)
Q Consensus 27 ~~~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~------------G~--G~ 88 (348)
.++.++.+..+-+ +..|+||++||++.+...|...+ ...+...||.|+++|+| |+ |.
T Consensus 35 ~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~ 109 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFW-----IPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTA 109 (304)
T ss_dssp CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHHHT-----HHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCT
T ss_pred CCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHHHH-----HHHHHHCCcEEEEeCCccccCCCccccccCccccc
Confidence 4566777665422 35689999999999886653222 23444679999999999 55 66
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHc--CCCceeEEEeChhHHHHHHHHHhCCC-CcceEEEecCCC
Q 018947 89 GAAAISDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLC 154 (348)
Q Consensus 89 S~~~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 154 (348)
|..+.+ .....++++.+.+..+.+.. +.++++|+|||+||.+++.++.++|+ +++++|++++..
T Consensus 110 s~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 110 AGNPRH--VDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp TSCBCC--GGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred cCCCCc--ccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 643211 12344455544444444433 35789999999999999999999995 899999887544
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-16 Score=134.42 Aligned_cols=220 Identities=9% Similarity=0.040 Sum_probs=129.0
Q ss_pred CCceeEEEEccC-----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC----------
Q 018947 28 SHGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA---------- 92 (348)
Q Consensus 28 ~~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~---------- 92 (348)
.+..+.+..+-+ ...|+||++||.+++...|..... ....+...|+.|+++|.+++|.+...
T Consensus 32 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~---~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~ 108 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNFITKSG---FQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSA 108 (283)
T ss_dssp TTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHHHHHHSC---THHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTB
T ss_pred hCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccchhhccc---HHHHHhhCCeEEEEeccccccccccccccccccCCC
Confidence 455666665532 245799999999998877632111 11233356999999998744422110
Q ss_pred ----CCCC---CCCCC-HHHHHHHHHHHHHHc--CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHH
Q 018947 93 ----ISDD---EPVLS-VDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEW 162 (348)
Q Consensus 93 ----~~~~---~~~~~-~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 162 (348)
.... ..... .+.+++++..+++.. ..++++++||||||.+|+.+|.++|+++++++++++........ +
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~-~ 187 (283)
T 4b6g_A 109 GFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVP-W 187 (283)
T ss_dssp CTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGSH-H
T ss_pred cccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccCc-c
Confidence 0000 01112 444466788877665 23689999999999999999999999999999999876632210 0
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCC
Q 018947 163 LYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQ 242 (348)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 242 (348)
. ...+..+++... .. +.... ....... + ...
T Consensus 188 ~-------------------~~~~~~~~g~~~--------~~--------~~~~~---~~~~~~~----------~-~~~ 218 (283)
T 4b6g_A 188 G-------------------EKAFTAYLGKDR--------EK--------WQQYD---ANSLIQQ----------G-YKV 218 (283)
T ss_dssp H-------------------HHHHHHHHCSCG--------GG--------GGGGC---HHHHHHH----------T-CCC
T ss_pred h-------------------hhhHHhhcCCch--------HH--------HHhcC---HHHHHHh----------c-ccC
Confidence 0 001111222110 00 00000 0011110 1 134
Q ss_pred ccEEEEecCCCCCCch---HHHHHHhhcc--CCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 243 CRSLIFVGESSPFHSE---AVHMTSKIDR--RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 243 ~Pvl~i~g~~D~~~~~---~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.|+++++|+.|.+++. ...+.+.+.. ..++++++++++|.... .....+...+|+.+.
T Consensus 219 ~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~l~~~l~~~~~~ 281 (283)
T 4b6g_A 219 QGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYF--IASFIGEHIAYHAAF 281 (283)
T ss_dssp SCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSSHHH--HHHHHHHHHHHHHTT
T ss_pred CCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcCHhH--HHHHHHHHHHHHHHh
Confidence 6999999999999854 5556555543 23799999999996532 233445556666553
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-15 Score=128.00 Aligned_cols=187 Identities=16% Similarity=0.164 Sum_probs=116.9
Q ss_pred eeEEEEccC---CCCCeEEEeCCCCCChhhhccccccchhhhhhc--cCCeEEEEeCCC------CCCCCCCCCC---CC
Q 018947 31 SLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL--LHNFCIYHINPP------GHEFGAAAIS---DD 96 (348)
Q Consensus 31 ~l~~~~~g~---~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~--~~g~~vi~~D~~------G~G~S~~~~~---~~ 96 (348)
.+.|...+. +..|.|||+||+|++...|.... ..+. ..++.+++++-| |.|.+..+.. ..
T Consensus 52 ~l~y~~~p~~~~~~~plVI~LHG~G~~~~~~~~~~------~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~ 125 (285)
T 4fhz_A 52 KLTFGRRGAAPGEATSLVVFLHGYGADGADLLGLA------EPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGS 125 (285)
T ss_dssp CCCEEEEESCTTCCSEEEEEECCTTBCHHHHHTTH------HHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCC
T ss_pred cceeecCCCCCCCCCcEEEEEcCCCCCHHHHHHHH------HHHHHhCCCeEEEecCCCcccccCCCcccccccccccCc
Confidence 345555543 34568999999999987764222 2222 248899998754 3443211000 00
Q ss_pred CC---CCCHHHHHHHHHHHH----HHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH
Q 018947 97 EP---VLSVDDLADQIAEVL----NHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (348)
Q Consensus 97 ~~---~~~~~~~~~dl~~~l----~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (348)
.. ...+.+.++++.+++ +..++ ++++++|+|+||++++.++.++|+++.++|.+++....+
T Consensus 126 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~---------- 195 (285)
T 4fhz_A 126 SETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAP---------- 195 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCH----------
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCc----------
Confidence 00 011222334444444 34444 689999999999999999999999999999887532210
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEE
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 247 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 247 (348)
+... .....+.|+++
T Consensus 196 ------------------------------------~~~~-----------------------------~~~~~~~Pvl~ 210 (285)
T 4fhz_A 196 ------------------------------------ERLA-----------------------------EEARSKPPVLL 210 (285)
T ss_dssp ------------------------------------HHHH-----------------------------HHCCCCCCEEE
T ss_pred ------------------------------------hhhh-----------------------------hhhhhcCcccc
Confidence 0000 00123579999
Q ss_pred EecCCCCCCc--hHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 248 FVGESSPFHS--EAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++|++|++++ ..+.+.+.+... ..+++++++.||.+. +++ .+.+.+||++.
T Consensus 211 ~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~-l~~~~~fL~~~ 265 (285)
T 4fhz_A 211 VHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA---PDG-LSVALAFLKER 265 (285)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHH-HHHHHHHHHHH
T ss_pred eeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHH-HHHHHHHHHHH
Confidence 9999999983 445556655543 378899999999764 444 45688999886
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-16 Score=146.66 Aligned_cols=232 Identities=10% Similarity=0.019 Sum_probs=139.8
Q ss_pred cceeec-CCceeEEEEcc------CCCCCeEEEeCCCCCChhhhccccccchhh-hhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 22 DNLIKT-SHGSLSVTIYG------DQDKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 22 ~~~v~~-~~~~l~~~~~g------~~~~p~vvllHG~~~~~~~~~~~~~~~~~~-~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
+..+.+ +|.++++..+- +...|+||++||.+....... +.... ..++++||.|+.+|+||+|.+....
T Consensus 451 ~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~----~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~ 526 (711)
T 4hvt_A 451 QKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPY----FSRIKNEVWVKNAGVSVLANIRGGGEFGPEW 526 (711)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCC----CCHHHHHHTGGGTCEEEEECCTTSSTTCHHH
T ss_pred EEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCc----ccHHHHHHHHHCCCEEEEEeCCCCCCcchhH
Confidence 334444 55577665542 135689999999866554321 11122 2567889999999999998653210
Q ss_pred ----CCCCCCCCHHHHHHHHHHHHHHc--CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH
Q 018947 94 ----SDDEPVLSVDDLADQIAEVLNHF--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (348)
Q Consensus 94 ----~~~~~~~~~~~~~~dl~~~l~~l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (348)
........++|+.+.+..+++.- +.+++.++|+|+||.+++.++.++|++++++|...+.........
T Consensus 527 ~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~------ 600 (711)
T 4hvt_A 527 HKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKE------ 600 (711)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG------
T ss_pred HHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhc------
Confidence 00111223445555555554432 236899999999999999999999999999999988776432110
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCc--cE
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQC--RS 245 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~--Pv 245 (348)
.... ......+ +... .++..+.+ .. ......+.++++ |+
T Consensus 601 -------~~~~----~~~~~~~-G~p~-------~~~~~~~l----------------~~----~SP~~~v~~i~~~pPv 641 (711)
T 4hvt_A 601 -------FGAG----HSWVTEY-GDPE-------IPNDLLHI----------------KK----YAPLENLSLTQKYPTV 641 (711)
T ss_dssp -------STTG----GGGHHHH-CCTT-------SHHHHHHH----------------HH----HCGGGSCCTTSCCCEE
T ss_pred -------cccc----hHHHHHh-CCCc-------CHHHHHHH----------------HH----cCHHHHHhhcCCCCCE
Confidence 0000 0000111 1100 11111111 11 122334556676 99
Q ss_pred EEEecCCCCCCc--hHHHHHHhh-ccC--CcEEEEecCCCCCcccc--ChhhhHHHHHHHHhhc
Q 018947 246 LIFVGESSPFHS--EAVHMTSKI-DRR--YSALVEVQACGSMVTEE--QPHAMLIPMEYFLMGY 302 (348)
Q Consensus 246 l~i~g~~D~~~~--~~~~~~~~~-~~~--~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~~ 302 (348)
|+++|++|..++ ....+.+.+ ... ..++++++++||..... +.....+.+.+||.+.
T Consensus 642 Lii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~ 705 (711)
T 4hvt_A 642 LITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANA 705 (711)
T ss_dssp EEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHH
Confidence 999999999983 455677777 432 37899999999986542 3345566778888765
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.3e-18 Score=149.94 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=85.4
Q ss_pred EccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCe---EEEEeCCCCCCCC-----CCCCCC------------
Q 018947 36 IYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF---CIYHINPPGHEFG-----AAAISD------------ 95 (348)
Q Consensus 36 ~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~---~vi~~D~~G~G~S-----~~~~~~------------ 95 (348)
..+++++++|||+||++++...|. ..+..+..+|| +|+++|+||||.| +.....
T Consensus 16 ~~g~~~~ppVVLlHG~g~s~~~w~------~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~ 89 (484)
T 2zyr_A 16 VAAAEDFRPVVFVHGLAGSAGQFE------SQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQI 89 (484)
T ss_dssp -----CCCCEEEECCTTCCGGGGH------HHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGG
T ss_pred ccCCCCCCEEEEECCCCCCHHHHH------HHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccc
Confidence 345567789999999999887653 23355667799 7999999999976 110000
Q ss_pred ---------------CCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCC---CCcceEEEecCCCC
Q 018947 96 ---------------DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCK 155 (348)
Q Consensus 96 ---------------~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 155 (348)
.....+.+++++++.+++++++.++++++||||||.+++.++.++| ++|+++|++++...
T Consensus 90 id~~~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 90 IDPETLDKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp SCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccccccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0112456677788888889999999999999999999999999998 48999999998764
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=136.41 Aligned_cols=115 Identities=12% Similarity=0.065 Sum_probs=92.9
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~ 119 (348)
+.+++|||+||++++...+.....|......+..+||+|+++|+||+|.|..+ ..+.+++++++.++++.++.+
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~------~~~~~~l~~~i~~~l~~~~~~ 79 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP------NGRGEQLLAYVKTVLAATGAT 79 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST------TSHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC------CCCHHHHHHHHHHHHHHhCCC
Confidence 46788999999998874221101233444566678999999999999988532 367899999999999999999
Q ss_pred ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (348)
+++++||||||.++..++.++|++|+++|+++++.......
T Consensus 80 ~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~~G~~~a 120 (320)
T 1ys1_X 80 KVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGSEFA 120 (320)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHH
T ss_pred CEEEEEECHhHHHHHHHHHhChhhceEEEEECCCCCCccHH
Confidence 99999999999999999999999999999999876554433
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.5e-17 Score=136.10 Aligned_cols=106 Identities=12% Similarity=0.121 Sum_probs=83.2
Q ss_pred CCCCeEEEeCCCCCCh-hhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q 018947 40 QDKPALVTYPDLALNY-MSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~-~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~ 118 (348)
.++++|||+||++.+. ..|...+ ...+.++||+|+++|+||||.++. ..+.+++++.+.++++..+.
T Consensus 63 ~~~~pVVLvHG~~~~~~~~w~~~l-----~~~L~~~Gy~V~a~DlpG~G~~~~-------~~~~~~la~~I~~l~~~~g~ 130 (316)
T 3icv_A 63 SVSKPILLVPGTGTTGPQSFDSNW-----IPLSAQLGYTPCWISPPPFMLNDT-------QVNTEYMVNAITTLYAGSGN 130 (316)
T ss_dssp BCSSEEEEECCTTCCHHHHHTTTH-----HHHHHHTTCEEEEECCTTTTCSCH-------HHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEEECCCCCCcHHHHHHHH-----HHHHHHCCCeEEEecCCCCCCCcH-------HHHHHHHHHHHHHHHHHhCC
Confidence 4678999999999987 3442122 244556799999999999997531 23566777888888888898
Q ss_pred CceeEEEeChhHHHHHHHHHhC---CCCcceEEEecCCCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAP 157 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~ 157 (348)
++++||||||||.++..++..+ +++|+++|++++.....
T Consensus 131 ~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt 172 (316)
T 3icv_A 131 NKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 172 (316)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCB
T ss_pred CceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCCc
Confidence 9999999999999998777765 58999999999887643
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.5e-15 Score=129.43 Aligned_cols=114 Identities=8% Similarity=-0.084 Sum_probs=73.8
Q ss_pred CCCeEEEeCCCCCChhhhccc-cc--cchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCCCCC-----CCCHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQG-LF--FCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEP-----VLSVDDLADQIAE 111 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~-~~--~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~~~~-----~~~~~~~~~dl~~ 111 (348)
..|+|++.||.... ..+... .. .......++ ++||.|+++|+||+|.|..... ... .+.+.|.++++..
T Consensus 73 ~~PvV~~~HG~~~~-~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~-~~~~~~~~~~~~~D~~~a~~~ 150 (377)
T 4ezi_A 73 QVGIISYQHGTRFE-RNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLH-PYVQAETLASSSIDMLFAAKE 150 (377)
T ss_dssp CEEEEEEECCCCCS-TTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSC-CTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCC-cccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCc-ccccchhHHHHHHHHHHHHHH
Confidence 45789999999853 222100 00 011223455 8999999999999999874211 010 0122233344444
Q ss_pred HHHHcCC---CceeEEEeChhHHHHHHHHHhCCC-----CcceEEEecCCCCC
Q 018947 112 VLNHFGL---GAVMCMGVTAGAYILTLFAMKYRH-----RVLGLILVSPLCKA 156 (348)
Q Consensus 112 ~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~ 156 (348)
+++.+++ .+++++|||+||.+++.+|..+|+ .+.+.+..+++...
T Consensus 151 ~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl 203 (377)
T 4ezi_A 151 LANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGW 203 (377)
T ss_dssp HHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCH
T ss_pred HhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCH
Confidence 5555554 689999999999999999887654 58888888887764
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-16 Score=133.98 Aligned_cols=108 Identities=14% Similarity=0.048 Sum_probs=88.5
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~ 119 (348)
+.+|+|||+||++++...+. ...|......+..+||+|+++|+||+|.+. .+.+++++++.++++.++.+
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~-~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~---------~~~~~~~~~i~~~~~~~~~~ 74 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILG-VDYWFGIPSALRRDGAQVYVTEVSQLDTSE---------VRGEQLLQQVEEIVALSGQP 74 (285)
T ss_dssp CCSSCEEEECCTTCCSEETT-EESSTTHHHHHHHTTCCEEEECCCSSSCHH---------HHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCeEEEeCCCCCCccccc-cccHHHHHHHHHhCCCEEEEEeCCCCCCch---------hhHHHHHHHHHHHHHHhCCC
Confidence 46789999999988754111 112333445666779999999999999763 57899999999999999989
Q ss_pred ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
+++++||||||.++..++.++|++|+++|+++++....
T Consensus 75 ~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~g~ 112 (285)
T 1ex9_A 75 KVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGS 112 (285)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCC
T ss_pred CEEEEEECHhHHHHHHHHHhChhheeEEEEECCCCCCc
Confidence 99999999999999999999999999999999865543
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=137.27 Aligned_cols=117 Identities=12% Similarity=-0.002 Sum_probs=89.7
Q ss_pred CCCCeEEEeCCCCCChhhhc----ccccc----chhhhhhccCCeE---EEEeCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018947 40 QDKPALVTYPDLALNYMSCF----QGLFF----CPEACSLLLHNFC---IYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~----~~~~~----~~~~~~~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d 108 (348)
..+++|||+||++++...|. ....| ...+..+..+||. |+++|+||+|.|..+.......+..++++++
T Consensus 38 ~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~ 117 (342)
T 2x5x_A 38 ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTF 117 (342)
T ss_dssp CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHH
T ss_pred CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHH
Confidence 35678999999999654211 01123 3444566677998 9999999999875431111233567888888
Q ss_pred HHHHHHHcCCCceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCCC
Q 018947 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKA 156 (348)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~ 156 (348)
+.+++++++.++++|+||||||.+++.++.++ |++|+++|+++++...
T Consensus 118 I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 118 IDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRG 167 (342)
T ss_dssp HHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTC
T ss_pred HHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCccc
Confidence 99999999999999999999999999999998 8999999999987754
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=7.3e-15 Score=124.29 Aligned_cols=125 Identities=10% Similarity=0.057 Sum_probs=85.1
Q ss_pred CceeEEEEccCCCCCeEEEeCCCCC--ChhhhccccccchhhhhhccCCeEEEEeCCCCC-CCCCCCCCCCC----CCCC
Q 018947 29 HGSLSVTIYGDQDKPALVTYPDLAL--NYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAISDDE----PVLS 101 (348)
Q Consensus 29 ~~~l~~~~~g~~~~p~vvllHG~~~--~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~~~~~~----~~~~ 101 (348)
+..+.++..... .++|+|+||+++ +...|.... .....+...++.|+++|.+|. +.++...+... ....
T Consensus 17 ~~~~~v~~~p~~-~~~v~llHG~~~~~~~~~w~~~~---~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~ 92 (280)
T 1dqz_A 17 GRDIKVQFQGGG-PHAVYLLDGLRAQDDYNGWDINT---PAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYK 92 (280)
T ss_dssp TEEEEEEEECCS-SSEEEECCCTTCCSSSCHHHHHS---CHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCB
T ss_pred CceeEEEEcCCC-CCEEEEECCCCCCCCcccccccC---cHHHHHhcCCeEEEEECCCCCccccCCCCCCcccccccccc
Confidence 345655554322 468999999953 665553211 111224456899999998764 22221111100 2356
Q ss_pred HHHH-HHHHHHHHHH-cCCC--ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 102 VDDL-ADQIAEVLNH-FGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 102 ~~~~-~~dl~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
++++ ++++..++++ +++. +++|+||||||.+|+.+|.++|+++++++++++.....
T Consensus 93 ~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 93 WETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp HHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccccc
Confidence 6664 5889888877 7764 89999999999999999999999999999999887653
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.7e-17 Score=144.89 Aligned_cols=107 Identities=9% Similarity=0.045 Sum_probs=85.3
Q ss_pred CCCCeEEEeCCCCCCh-hhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-
Q 018947 40 QDKPALVTYPDLALNY-MSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~-~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l- 116 (348)
+++|+|||+||++++. ..|...+ ...++. .+|+|+++|+||+|.|..+ ....+++++++|+.++++.+
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~l-----~~~l~~~~~~~Vi~~D~~G~G~S~~~----~~~~~~~~~~~dl~~li~~L~ 138 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDGWLLDM-----CKKMFQVEKVNCICVDWRRGSRTEYT----QASYNTRVVGAEIAFLVQVLS 138 (452)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHH-----HHHHHTTCCEEEEEEECHHHHSSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCchHHHHH-----HHHHHhhCCCEEEEEechhcccCchh----HhHhhHHHHHHHHHHHHHHHH
Confidence 5678999999999887 4443211 134444 3999999999999988632 12356678888999998887
Q ss_pred ---CC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 117 ---GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 117 ---~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
++ ++++|+||||||.+|+.+|.++|++|+++++++|...
T Consensus 139 ~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 139 TEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 54 7999999999999999999999999999999998653
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.64 E-value=6.8e-17 Score=144.86 Aligned_cols=107 Identities=10% Similarity=0.007 Sum_probs=85.0
Q ss_pred CCCCeEEEeCCCCCCh-hhhccccccchhhhhhccC-CeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-
Q 018947 40 QDKPALVTYPDLALNY-MSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~-~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l- 116 (348)
+.+|+||++||++++. ..|... ....++.. +|+|+++|+||||.|..+ ....+++++++++.++++.+
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~-----~~~~l~~~~~~~Vi~~D~~g~G~S~~~----~~~~~~~~~~~dl~~~i~~L~ 138 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSD-----MCKKILQVETTNCISVDWSSGAKAEYT----QAVQNIRIVGAETAYLIQQLL 138 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHH-----HHHHHHTTSCCEEEEEECHHHHTSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCCCchHHHH-----HHHHHHhhCCCEEEEEecccccccccH----HHHHhHHHHHHHHHHHHHHHH
Confidence 5678999999999887 444321 12344443 999999999999988532 12346678888999888877
Q ss_pred ---C--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 117 ---G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 117 ---~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+ .++++|+||||||.+|+.+|.++|++|+++|+++|...
T Consensus 139 ~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 139 TELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 5 67999999999999999999999999999999998653
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-16 Score=142.42 Aligned_cols=107 Identities=8% Similarity=0.022 Sum_probs=82.7
Q ss_pred CCCCeEEEeCCCCCChh-hhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-
Q 018947 40 QDKPALVTYPDLALNYM-SCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l- 116 (348)
+.+|+|||+||++++.. .|...+ ...++ ..+|+||++|+||||.|..+ ...++++.+++++.++++.+
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l-----~~~ll~~~~~~VI~vD~~g~g~s~y~----~~~~~~~~v~~~la~ll~~L~ 137 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTM-----CQNMFKVESVNCICVDWKSGSRTAYS----QASQNVRIVGAEVAYLVGVLQ 137 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHH-----HHHHHHHCCEEEEEEECHHHHSSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCCCCCccHHHHH-----HHHHHhcCCeEEEEEeCCcccCCccH----HHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999998853 343211 12333 46899999999999987522 12345677788888888765
Q ss_pred -----CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 117 -----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 117 -----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+.++++|+||||||.+|..+|.++|++|.++++++|...
T Consensus 138 ~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 138 SSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 468999999999999999999999999999999998654
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-14 Score=121.14 Aligned_cols=124 Identities=10% Similarity=0.000 Sum_probs=83.4
Q ss_pred CCceeEEEEccCCCCCeEEEeCCCC--CChhhhccccccchhhhhhccCCeEEEEeCCCCCC-CCCCCCCCCCCCCCH-H
Q 018947 28 SHGSLSVTIYGDQDKPALVTYPDLA--LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-FGAAAISDDEPVLSV-D 103 (348)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vvllHG~~--~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G-~S~~~~~~~~~~~~~-~ 103 (348)
.+..+.+. +-+++.|+|||+||++ .+...|.... .....+...|+.|+++|.++.+ .++.... ....+ +
T Consensus 21 ~~~~~~~~-~~P~~~p~vvllHG~~~~~~~~~w~~~~---~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~---~~~~~~~ 93 (280)
T 1r88_A 21 MGRDIPVA-FLAGGPHAVYLLDAFNAGPDVSNWVTAG---NAMNTLAGKGISVVAPAGGAYSMYTNWEQD---GSKQWDT 93 (280)
T ss_dssp TTEEEEEE-EECCSSSEEEEECCSSCCSSSCHHHHTS---CHHHHHTTSSSEEEEECCCTTSTTSBCSSC---TTCBHHH
T ss_pred cCCcceEE-EeCCCCCEEEEECCCCCCCChhhhhhcc---cHHHHHhcCCeEEEEECCCCCCccCCCCCC---CCCcHHH
Confidence 34455555 3223358999999995 4555553211 0112234568999999997642 2221101 11234 4
Q ss_pred HHHHHHHHHHHH-cCCC--ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC
Q 018947 104 DLADQIAEVLNH-FGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS 158 (348)
Q Consensus 104 ~~~~dl~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 158 (348)
.+++++..++++ ++++ +++|+||||||.+++.+|.++|+++++++++++......
T Consensus 94 ~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~ 151 (280)
T 1r88_A 94 FLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSN 151 (280)
T ss_dssp HHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTS
T ss_pred HHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCC
Confidence 456788888877 7764 899999999999999999999999999999998876543
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=124.73 Aligned_cols=126 Identities=10% Similarity=0.024 Sum_probs=84.3
Q ss_pred CceeEEEEccC-CCCCeEEEeCCC--CCChhhhccccccchhhhhhccCCeEEEEeCCCCC-CCCCCCCCC-CC---CCC
Q 018947 29 HGSLSVTIYGD-QDKPALVTYPDL--ALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAISD-DE---PVL 100 (348)
Q Consensus 29 ~~~l~~~~~g~-~~~p~vvllHG~--~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~~~~-~~---~~~ 100 (348)
+.++.++.... +..|+|||+||. +.+...|.... .....+...++.|+++|.++. +.++...+. .. ...
T Consensus 20 ~~~i~v~~~p~~~~~p~vvllHG~~~~~~~~~w~~~~---~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~ 96 (304)
T 1sfr_A 20 GRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINT---PAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTY 96 (304)
T ss_dssp TEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHC---CHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECC
T ss_pred CCceEEEECCCCCCCCEEEEeCCCCCCCCcchhhcCC---CHHHHHhcCCeEEEEECCCCCccccccCCccccccccccc
Confidence 34565553222 467899999999 55665553221 011223456899999999764 222211010 00 134
Q ss_pred CHHHH-HHHHHHHHHH-cCCC--ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 101 SVDDL-ADQIAEVLNH-FGLG--AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 101 ~~~~~-~~dl~~~l~~-l~~~--~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
.++++ ++++..++++ +++. +++|+||||||.+++.++.++|+++++++++++.....
T Consensus 97 ~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 157 (304)
T 1sfr_A 97 KWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (304)
T ss_dssp BHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcc
Confidence 56665 4788888876 6654 89999999999999999999999999999999877643
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-14 Score=133.63 Aligned_cols=122 Identities=11% Similarity=0.019 Sum_probs=87.0
Q ss_pred ceeec-CCceeEEEEccC---CCCCeEEEeCCCCCChhhhccccccchhh-hhhccCCeEEEEeCCCCCCCCCCCCCCCC
Q 018947 23 NLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEA-CSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (348)
Q Consensus 23 ~~v~~-~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~~~~~~~~~~~-~~~~~~g~~vi~~D~~G~G~S~~~~~~~~ 97 (348)
..+.+ +|.+|++..+.+ ...|+||++||++.....+.. + .... ..+.++||.|+++|+||+|.|......
T Consensus 12 v~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~-y--~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~-- 86 (587)
T 3i2k_A 12 VMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWS-T--QSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP-- 86 (587)
T ss_dssp EEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHHHH-T--TTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT--
T ss_pred EEEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCcccccc-c--hhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc--
Confidence 44555 566788776532 245789999998877532210 0 0112 467789999999999999999754221
Q ss_pred CCCCHHHHHHHHHHHHHHcC-----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCC
Q 018947 98 PVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (348)
Q Consensus 98 ~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (348)
+.+.++|+.++++.+. ..++.++||||||.+++.+|..+|+.++++|++++.
T Consensus 87 ----~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 87 ----HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp ----TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred ----ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 2234566666665542 258999999999999999999999999999999887
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.60 E-value=3.3e-16 Score=139.71 Aligned_cols=106 Identities=10% Similarity=0.060 Sum_probs=82.9
Q ss_pred CCCCeEEEeCCCCCChh-hhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-
Q 018947 40 QDKPALVTYPDLALNYM-SCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l- 116 (348)
+.+|+|||+||++++.. .|...+ ...++. .+|+||++|+||+|.|..+ ...++++.+++++.++++.+
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l-----~~~ll~~~~~~VI~vD~~g~g~s~y~----~~~~~~~~~a~~l~~ll~~L~ 138 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDM-----CKNMFKVEEVNCICVDWKKGSQTSYT----QAANNVRVVGAQVAQMLSMLS 138 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHH-----HHHHTTTCCEEEEEEECHHHHSSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEccCCCCCCcchHHHH-----HHHHHhcCCeEEEEEeCccccCCcch----HHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999998864 443211 134454 4899999999999876422 12356777888898888776
Q ss_pred -----CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 117 -----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 117 -----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+.++++|+||||||.+|..+|.++|+ |.++++++|...
T Consensus 139 ~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 139 ANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred HhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 46899999999999999999999999 999999998764
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.9e-15 Score=130.79 Aligned_cols=112 Identities=15% Similarity=0.161 Sum_probs=82.7
Q ss_pred CCCeEEEeCCCCCChhhhcc-ccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCC------CCCCCCCHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQ-GLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAIS------DDEPVLSVDDLADQIAEV 112 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~-~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~~dl~~~ 112 (348)
.+.+|||+||..++...... .-++ ..++. -|+.|+++|+||||+|.+... ......+.+++++|+..+
T Consensus 37 ~g~Pi~l~~Ggeg~~~~~~~~~g~~----~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~ 112 (446)
T 3n2z_B 37 NGGSILFYTGNEGDIIWFCNNTGFM----WDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAEL 112 (446)
T ss_dssp TTCEEEEEECCSSCHHHHHHHCHHH----HHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcchhhhhcccHH----HHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHH
Confidence 34568888988877543221 1111 12222 278999999999999964211 122345799999999999
Q ss_pred HHHcCC-------CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 113 LNHFGL-------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 113 l~~l~~-------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
+++++. .+++++||||||++|+.++.++|++|.++|+.+++...
T Consensus 113 ~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 113 IKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQ 163 (446)
T ss_dssp HHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTTC
T ss_pred HHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchhc
Confidence 987754 38999999999999999999999999999998866553
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.1e-14 Score=116.28 Aligned_cols=192 Identities=9% Similarity=0.103 Sum_probs=116.4
Q ss_pred eeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC--------------CCCCCCCC
Q 018947 31 SLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH--------------EFGAAAIS 94 (348)
Q Consensus 31 ~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~--------------G~S~~~~~ 94 (348)
.+.|....+ +.+++|||+||+|++..++.... .. ......++.+++++-|-. ........
T Consensus 24 ~l~y~ii~P~~~~~~~VI~LHG~G~~~~dl~~l~---~~-l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~ 99 (246)
T 4f21_A 24 AMNYELMEPAKQARFCVIWLHGLGADGHDFVDIV---NY-FDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDAN 99 (246)
T ss_dssp CCCEEEECCSSCCCEEEEEEEC--CCCCCGGGGG---GG-CCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---
T ss_pred CcCceEeCCCCcCCeEEEEEcCCCCCHHHHHHHH---HH-hhhcCCCeEEEeCCCCccccccCCCCCccccccccccccc
Confidence 455555543 45669999999999987764222 00 011124788999875421 11000000
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHH-----cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH
Q 018947 95 ---DDEPVLSVDDLADQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 95 ---~~~~~~~~~~~~~dl~~~l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (348)
.......+.+.++.+..+++. ++.++++++|+|+||++++.++.++|+++.+++.+++...... .
T Consensus 100 ~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~--~----- 172 (246)
T 4f21_A 100 SLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWD--N----- 172 (246)
T ss_dssp CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHH--H-----
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccc--c-----
Confidence 000122345555555555532 2346899999999999999999999999999999876432100 0
Q ss_pred HHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEE
Q 018947 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 246 (348)
+ .... . -...++|++
T Consensus 173 ----------------------~-~~~~-------------------------------------~-----~~~~~~Pvl 187 (246)
T 4f21_A 173 ----------------------F-KGKI-------------------------------------T-----SINKGLPIL 187 (246)
T ss_dssp ----------------------H-STTC-------------------------------------C-----GGGTTCCEE
T ss_pred ----------------------c-cccc-------------------------------------c-----ccccCCchh
Confidence 0 0000 0 011257999
Q ss_pred EEecCCCCCCc--hHHHHHHhhccC--CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 247 IFVGESSPFHS--EAVHMTSKIDRR--YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 247 ~i~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+++|++|++++ ..+++.+.+... ..++..+++.||.+. +++ .+.+.+||++.
T Consensus 188 ~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~---~~~-l~~~~~fL~k~ 243 (246)
T 4f21_A 188 VCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC---MEE-IKDISNFIAKT 243 (246)
T ss_dssp EEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC---HHH-HHHHHHHHHHH
T ss_pred hcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC---HHH-HHHHHHHHHHH
Confidence 99999999994 445566666553 368889999999764 444 45688899775
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.58 E-value=7.4e-16 Score=137.75 Aligned_cols=107 Identities=8% Similarity=0.041 Sum_probs=84.0
Q ss_pred CCCCeEEEeCCCCCCh-hhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-
Q 018947 40 QDKPALVTYPDLALNY-MSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF- 116 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~-~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l- 116 (348)
+++|+||++||++++. ..|...+ ...+.. .+|+|+++|+||+|.|..+ ....+++++++|+.++++.+
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~-----~~~l~~~~~~~Vi~~D~~g~g~s~~~----~~~~~~~~~~~dl~~~i~~l~ 138 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDM-----CKNMFQVEKVNCICVDWKGGSKAQYS----QASQNIRVVGAEVAYLVQVLS 138 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHH-----HHHHHHHCCEEEEEEECHHHHTSCHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCchHHHHH-----HHHHHhcCCcEEEEEECccccCccch----hhHhhHHHHHHHHHHHHHHHH
Confidence 5678999999999987 4553211 134444 6999999999999987522 12345677788888888766
Q ss_pred ---C--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 117 ---G--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 117 ---~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+ .++++++||||||.+|+.+|.++|++|++++++++...
T Consensus 139 ~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 139 TSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp HHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred HhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 4 57999999999999999999999999999999987654
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.8e-13 Score=126.78 Aligned_cols=135 Identities=11% Similarity=0.085 Sum_probs=85.1
Q ss_pred ccceeec-CCceeEEEEccCC---CCCeEEEeCCCCCChh--hhcccc---ccchhhhhhccCCeEEEEeCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGDQ---DKPALVTYPDLALNYM--SCFQGL---FFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~~---~~p~vvllHG~~~~~~--~~~~~~---~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 91 (348)
+...+.. +|.+|++..+.+. ..|+||++||++.+.. .+.... .+......+.++||.|+++|+||+|.|..
T Consensus 26 ~~v~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 26 REVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 3445555 5668887766432 3478888999887530 000000 00000035668899999999999999875
Q ss_pred CCCCCCC---CCCH--HHHHHHHHHHHHHc----CC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 92 AISDDEP---VLSV--DDLADQIAEVLNHF----GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 92 ~~~~~~~---~~~~--~~~~~dl~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
....... .+.. ...++|+.++++.+ .. .++.++||||||.+++.+|..++++++++|.+++...
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 106 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 4221100 0010 02344444444332 21 3899999999999999999889999999999998776
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-12 Score=112.91 Aligned_cols=96 Identities=15% Similarity=0.108 Sum_probs=74.6
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL- 118 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~- 118 (348)
..+++|+|+||++++...|.. . ...+. +.|+++|+|+ . . ...+++++++++.+.++.+..
T Consensus 44 ~~~~~l~~~hg~~g~~~~~~~------~-~~~l~--~~v~~~~~~~--~-----~---~~~~~~~~a~~~~~~i~~~~~~ 104 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTTVFHS------L-ASRLS--IPTYGLQCTR--A-----A---PLDSIHSLAAYYIDCIRQVQPE 104 (316)
T ss_dssp CSSCCEEEECCTTCCSGGGHH------H-HHHCS--SCEEEECCCT--T-----S---CTTCHHHHHHHHHHHHTTTCSS
T ss_pred CCCCeEEEECCCCCCHHHHHH------H-HHhcC--CCEEEEECCC--C-----C---CcCCHHHHHHHHHHHHHHhCCC
Confidence 467889999999988765421 1 23343 9999999993 1 1 246899999999999988864
Q ss_pred CceeEEEeChhHHHHHHHHHhCC---CC---cceEEEecCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYR---HR---VLGLILVSPLC 154 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p---~~---v~~lvl~~~~~ 154 (348)
++++++||||||.+++++|.+.+ ++ +++++++++.+
T Consensus 105 ~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 105 GPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp CCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 78999999999999999998763 45 89999998764
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-15 Score=133.49 Aligned_cols=118 Identities=9% Similarity=0.068 Sum_probs=78.5
Q ss_pred CCCCeEEEeCCCCCChhh--hccccccc----hhhhhhccCCeEEEEeCCCCCCCCCCCCCC---------------CCC
Q 018947 40 QDKPALVTYPDLALNYMS--CFQGLFFC----PEACSLLLHNFCIYHINPPGHEFGAAAISD---------------DEP 98 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~--~~~~~~~~----~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~---------------~~~ 98 (348)
..+++|||+||++++... +....+|. .....+..+||+|+++|+||||.|...... ...
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 366789999999875321 00011221 233455578999999999999987421000 000
Q ss_pred CCCHHHHHHHHHHHHHHcCC-CceeEEEeChhHHHHHHHHHh--------------------------CCCCcceEEEec
Q 018947 99 VLSVDDLADQIAEVLNHFGL-GAVMCMGVTAGAYILTLFAMK--------------------------YRHRVLGLILVS 151 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~--------------------------~p~~v~~lvl~~ 151 (348)
.++++++++++.+++++++. ++++||||||||.+++.+|.. +|++|.++|+++
T Consensus 130 ~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~ 209 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIA 209 (431)
T ss_dssp HHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEES
T ss_pred cCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEEC
Confidence 12233334455556666653 799999999999999998876 689999999999
Q ss_pred CCCCCC
Q 018947 152 PLCKAP 157 (348)
Q Consensus 152 ~~~~~~ 157 (348)
++....
T Consensus 210 tP~~Gs 215 (431)
T 2hih_A 210 TPHNGT 215 (431)
T ss_dssp CCTTCC
T ss_pred CCCCCc
Confidence 876543
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.6e-13 Score=118.28 Aligned_cols=110 Identities=10% Similarity=0.036 Sum_probs=73.5
Q ss_pred CCCCeEEEeCCCCCChhh-hccccccchh----hhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH----
Q 018947 40 QDKPALVTYPDLALNYMS-CFQGLFFCPE----ACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA---- 110 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~-~~~~~~~~~~----~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~---- 110 (348)
+.+++|||+||++++... +....+|... ...+.++||+|+++|+||||.|.. ...++.+.+.
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~---------~a~~l~~~i~~~~v 74 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD---------RACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH---------HHHHHHHHHHCEEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc---------cHHHHHHHHHhhhh
Confidence 466789999999887532 1111123221 144556799999999999997631 1122222222
Q ss_pred --------------------HHHHH-cCCCceeEEEeChhHHHHHHHHHh-------------------CC------CCc
Q 018947 111 --------------------EVLNH-FGLGAVMCMGVTAGAYILTLFAMK-------------------YR------HRV 144 (348)
Q Consensus 111 --------------------~~l~~-l~~~~v~lvGhS~Gg~ia~~~a~~-------------------~p------~~v 144 (348)
+++++ .+.++++||||||||.++..++.+ +| ++|
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V 154 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFV 154 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccce
Confidence 11222 467899999999999999999973 35 799
Q ss_pred ceEEEecCCCCCCC
Q 018947 145 LGLILVSPLCKAPS 158 (348)
Q Consensus 145 ~~lvl~~~~~~~~~ 158 (348)
+++|+++++.....
T Consensus 155 ~sLV~i~tP~~Gs~ 168 (387)
T 2dsn_A 155 LSVTTIATPHDGTT 168 (387)
T ss_dssp EEEEEESCCTTCCG
T ss_pred eEEEEECCCCCCcH
Confidence 99999998776443
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2.3e-12 Score=121.13 Aligned_cols=136 Identities=12% Similarity=0.098 Sum_probs=84.7
Q ss_pred ccceeec-CCceeEEEEccC---CCCCeEEEeCCCCCChhhh--cccccc---chhh-hhhccCCeEEEEeCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALNYMSC--FQGLFF---CPEA-CSLLLHNFCIYHINPPGHEFGA 90 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~--~~~~~~---~~~~-~~~~~~g~~vi~~D~~G~G~S~ 90 (348)
+...+.+ +|.+|+...+-+ ...|+||++||++...... +....| .... ..+.++||.|+.+|+||+|.|.
T Consensus 38 ~~v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 38 REVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEEEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 4445655 555787766532 2347888899887652100 000000 0011 3566889999999999999987
Q ss_pred CCCCCCCC---CCCH--HHHHHHHHHHHHHc----CC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 91 AAISDDEP---VLSV--DDLADQIAEVLNHF----GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 91 ~~~~~~~~---~~~~--~~~~~dl~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
........ .+.- ...++|+.++++.+ .. .++.++|+||||.+++.+|.+++++++++|.+++....
T Consensus 118 g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 118 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred CcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 54221100 0110 02334444444332 21 48999999999999999999899999999999887663
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-11 Score=104.15 Aligned_cols=122 Identities=8% Similarity=0.004 Sum_probs=80.9
Q ss_pred ecCCceeEEEEccC------CCCCeEEEeCCCCCChhhhccc-cccchhhhhhccC----CeEEEEeCCCCCCCCCCCCC
Q 018947 26 KTSHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQG-LFFCPEACSLLLH----NFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 26 ~~~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~-~~~~~~~~~~~~~----g~~vi~~D~~G~G~S~~~~~ 94 (348)
...++.+.+.++-+ ...|+|+++||.+++...|+.. ......+..+.++ ++.|+++|.+|- +..
T Consensus 47 ~s~~~~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~--~~~--- 121 (297)
T 1gkl_A 47 TGINGTKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG--NCT--- 121 (297)
T ss_dssp EETTEEEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST--TCC---
T ss_pred EcCCCEEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC--ccc---
Confidence 33445666665532 2347889999998877655421 1011222344444 599999998762 211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHc-CC--------------CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 95 DDEPVLSVDDLADQIAEVLNHF-GL--------------GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l-~~--------------~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
...+ .+.+++++..+++.. .. .++.++|+||||.+++.++.++|+++++++++++...
T Consensus 122 --~~~~-~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~ 194 (297)
T 1gkl_A 122 --AQNF-YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 194 (297)
T ss_dssp --TTTH-HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred --hHHH-HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccccc
Confidence 1111 345567777777653 32 4589999999999999999999999999999998654
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=3.1e-12 Score=117.49 Aligned_cols=129 Identities=14% Similarity=0.133 Sum_probs=88.6
Q ss_pred cceeec-CCceeEEEEccC---CCCCeEEEeCCCCCChhhhcc---------------cc--ccchhhhhhccCCeEEEE
Q 018947 22 DNLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQ---------------GL--FFCPEACSLLLHNFCIYH 80 (348)
Q Consensus 22 ~~~v~~-~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~~~---------------~~--~~~~~~~~~~~~g~~vi~ 80 (348)
...+.. +|.+|+...+-+ ...|+||+.||++.+...-+. .+ |..+....+.++||.|++
T Consensus 43 ~v~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~ 122 (560)
T 3iii_A 43 DGTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVK 122 (560)
T ss_dssp EEEEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEE
T ss_pred EEEEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEE
Confidence 344555 556787766532 345799999999887321000 00 000123467788999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-----CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 81 INPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 81 ~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
+|.||+|.|..... .+. ....+|+.++++.+.. .++.++|||+||.+++.+|+..|++++++|..++...
T Consensus 123 ~D~RG~G~S~G~~~----~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d 197 (560)
T 3iii_A 123 VALRGSDKSKGVLS----PWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLND 197 (560)
T ss_dssp EECTTSTTCCSCBC----TTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCB
T ss_pred EcCCCCCCCCCccc----cCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCccc
Confidence 99999999874421 121 3556666666655422 4799999999999999999999999999999988665
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=3e-12 Score=113.88 Aligned_cols=110 Identities=14% Similarity=0.068 Sum_probs=69.3
Q ss_pred CCeEEEeCCCCCChhhhccc---------------cccchhhhhh-ccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHH
Q 018947 42 KPALVTYPDLALNYMSCFQG---------------LFFCPEACSL-LLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~---------------~~~~~~~~~~-~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (348)
.|+|.+-||..+....+.-. .+....+..+ +.+||.|+++|++|+|.+-.. ....-...
T Consensus 106 ~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~~-----~~~~~~~v 180 (462)
T 3guu_A 106 PKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIA-----GYEEGMAI 180 (462)
T ss_dssp CEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTTC-----HHHHHHHH
T ss_pred CcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCcccC-----CcchhHHH
Confidence 57899999987654332100 0001223456 889999999999999963210 11111223
Q ss_pred HHHHHHHHHHcCC---CceeEEEeChhHHHHHHHHHhCC----C-CcceEEEecCCCCC
Q 018947 106 ADQIAEVLNHFGL---GAVMCMGVTAGAYILTLFAMKYR----H-RVLGLILVSPLCKA 156 (348)
Q Consensus 106 ~~dl~~~l~~l~~---~~v~lvGhS~Gg~ia~~~a~~~p----~-~v~~lvl~~~~~~~ 156 (348)
.+.+.+..+..++ .++.++|||+||..++..|...| + .+.+.+..+++...
T Consensus 181 lD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~dl 239 (462)
T 3guu_A 181 LDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVSA 239 (462)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCBH
T ss_pred HHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCCH
Confidence 3444444333233 68999999999999987776543 3 48888888887754
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-11 Score=108.32 Aligned_cols=127 Identities=9% Similarity=0.113 Sum_probs=81.5
Q ss_pred CCceeEEEEcc----CCCCCeEEEeCCCCCChhhhcccc--------ccc----hhhhhhccCCeEEEEeCCCCCCCCCC
Q 018947 28 SHGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGL--------FFC----PEACSLLLHNFCIYHINPPGHEFGAA 91 (348)
Q Consensus 28 ~~~~l~~~~~g----~~~~p~vvllHG~~~~~~~~~~~~--------~~~----~~~~~~~~~g~~vi~~D~~G~G~S~~ 91 (348)
++..+....+- .+..|+||++||.+++........ .+. ..+..+.++||.|+++|+||+|.|..
T Consensus 96 ~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~~ 175 (391)
T 3g8y_A 96 PKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASD 175 (391)
T ss_dssp TTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGCS
T ss_pred CCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccCC
Confidence 45566655542 234579999999998765321000 000 23356678899999999999998864
Q ss_pred CCCCC-CCCCCHHHHH---------------HHHHHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEE
Q 018947 92 AISDD-EPVLSVDDLA---------------DQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLIL 149 (348)
Q Consensus 92 ~~~~~-~~~~~~~~~~---------------~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 149 (348)
..... ...+....++ .|+..+++.+ +.+++.++||||||.+++.+|+. +++|+++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~-~~~i~a~v~ 254 (391)
T 3g8y_A 176 LECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL-DKDIYAFVY 254 (391)
T ss_dssp SGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH-CTTCCEEEE
T ss_pred cccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc-CCceeEEEE
Confidence 31100 0113443333 5555555544 23578999999999999988775 468999998
Q ss_pred ecCCCC
Q 018947 150 VSPLCK 155 (348)
Q Consensus 150 ~~~~~~ 155 (348)
+++...
T Consensus 255 ~~~~~~ 260 (391)
T 3g8y_A 255 NDFLCQ 260 (391)
T ss_dssp ESCBCC
T ss_pred ccCCCC
Confidence 876543
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.22 E-value=9.3e-11 Score=104.04 Aligned_cols=125 Identities=10% Similarity=0.085 Sum_probs=78.4
Q ss_pred CCceeEEEEcc----CCCCCeEEEeCCCCCChhhhcc---------cccc---chhhhhhccCCeEEEEeCCCCCCCCCC
Q 018947 28 SHGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQ---------GLFF---CPEACSLLLHNFCIYHINPPGHEFGAA 91 (348)
Q Consensus 28 ~~~~l~~~~~g----~~~~p~vvllHG~~~~~~~~~~---------~~~~---~~~~~~~~~~g~~vi~~D~~G~G~S~~ 91 (348)
++.++....+- ....|+||++||.+++...... ..+. ......+.+.||.|+++|+||+|.|..
T Consensus 101 ~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~ 180 (398)
T 3nuz_A 101 PKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASD 180 (398)
T ss_dssp TTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSGGGCS
T ss_pred CCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCCcccc
Confidence 45566655542 2345799999999887553210 0000 023356778899999999999998864
Q ss_pred CCCCCC-CCC--------------C-HHHHHHHHHHHHHHcC------CCceeEEEeChhHHHHHHHHHhCCCCcceEEE
Q 018947 92 AISDDE-PVL--------------S-VDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHRVLGLIL 149 (348)
Q Consensus 92 ~~~~~~-~~~--------------~-~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 149 (348)
...... ..+ + ....+.|+...++.+. .+++.++||||||.+++.+++.. ++|+++|.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~~i~a~v~ 259 (398)
T 3nuz_A 181 LERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-TSIYAFVY 259 (398)
T ss_dssp SGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEEE
T ss_pred ccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-CcEEEEEE
Confidence 311000 001 1 1123355656665543 25789999999999999877765 57999888
Q ss_pred ecCC
Q 018947 150 VSPL 153 (348)
Q Consensus 150 ~~~~ 153 (348)
++..
T Consensus 260 ~~~~ 263 (398)
T 3nuz_A 260 NDFL 263 (398)
T ss_dssp ESCB
T ss_pred eccc
Confidence 7553
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=3.7e-10 Score=100.10 Aligned_cols=106 Identities=10% Similarity=0.029 Sum_probs=68.6
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCe----EEEEeCCCCCC-CCCCCCCCCCCCCCH-HHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNF----CIYHINPPGHE-FGAAAISDDEPVLSV-DDLADQIAEVLN 114 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~----~vi~~D~~G~G-~S~~~~~~~~~~~~~-~~~~~dl~~~l~ 114 (348)
..|+|+++||.+ |.........+..+.++|+ .|+++|.+|++ ++... . ....+ +.+++++..+++
T Consensus 196 ~~PvlvllHG~~-----~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~-~---~~~~~~~~l~~el~~~i~ 266 (403)
T 3c8d_A 196 ERPLAVLLDGEF-----WAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHEL-P---CNADFWLAVQQELLPLVK 266 (403)
T ss_dssp CCCEEEESSHHH-----HHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHS-S---SCHHHHHHHHHTHHHHHH
T ss_pred CCCEEEEeCCHH-----HhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccC-C---ChHHHHHHHHHHHHHHHH
Confidence 568999999942 2111101122345555665 49999998742 22100 0 01122 333456666665
Q ss_pred H-cCC----CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 115 H-FGL----GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 115 ~-l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
. +.. ++++++||||||.+++.++.++|+++++++++++...
T Consensus 267 ~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~ 312 (403)
T 3c8d_A 267 VIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYW 312 (403)
T ss_dssp HHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTT
T ss_pred HHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccc
Confidence 4 332 5799999999999999999999999999999988764
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.8e-09 Score=90.79 Aligned_cols=48 Identities=13% Similarity=0.228 Sum_probs=39.2
Q ss_pred HHHHHHHHH-cCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCC
Q 018947 107 DQIAEVLNH-FGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLC 154 (348)
Q Consensus 107 ~dl~~~l~~-l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 154 (348)
+++..+++. +++ +++.++||||||.+++.++.++|+.+++++++++..
T Consensus 137 ~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 137 EELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp HTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred HHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 455555543 443 579999999999999999999999999999998764
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.90 E-value=9.7e-07 Score=78.69 Aligned_cols=134 Identities=10% Similarity=-0.014 Sum_probs=82.5
Q ss_pred ccceeecC-CceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhh-----------hhhccCCeEEEEeCC-
Q 018947 21 KDNLIKTS-HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEA-----------CSLLLHNFCIYHINP- 83 (348)
Q Consensus 21 ~~~~v~~~-~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~-----------~~~~~~g~~vi~~D~- 83 (348)
..-++.++ +..++|..+.. .++|+||++||.++.+..+....-..+.. .....+..+|+.+|+
T Consensus 22 ~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP 101 (452)
T 1ivy_A 22 YSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESP 101 (452)
T ss_dssp EEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCS
T ss_pred eEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecC
Confidence 33456664 45777776542 35789999999887654431100000000 011234578999996
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHH---cCCCceeEEEeChhHHHHHHHHHh----CCCCcceEEEecC
Q 018947 84 PGHEFGAAAISDDEPVLSVDDLADQI----AEVLNH---FGLGAVMCMGVTAGAYILTLFAMK----YRHRVLGLILVSP 152 (348)
Q Consensus 84 ~G~G~S~~~~~~~~~~~~~~~~~~dl----~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~ 152 (348)
+|.|.|... .. ....+-++.++|+ ..+++. +...+++|+|+|+||..+..+|.. .+-.++++++.++
T Consensus 102 ~GtGfS~~~-~~-~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~ 179 (452)
T 1ivy_A 102 AGVGFSYSD-DK-FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp TTSTTCEES-SC-CCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred CCCCcCCcC-CC-CCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCC
Confidence 799998633 11 1222334455544 444443 345789999999999976666653 3567999999998
Q ss_pred CCCC
Q 018947 153 LCKA 156 (348)
Q Consensus 153 ~~~~ 156 (348)
....
T Consensus 180 ~~d~ 183 (452)
T 1ivy_A 180 LSSY 183 (452)
T ss_dssp CSBH
T ss_pred ccCh
Confidence 8753
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.65 E-value=5.5e-07 Score=77.32 Aligned_cols=130 Identities=6% Similarity=-0.028 Sum_probs=83.8
Q ss_pred HHHHHHHHHH-cCC-CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHH
Q 018947 106 ADQIAEVLNH-FGL-GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKE 183 (348)
Q Consensus 106 ~~dl~~~l~~-l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (348)
.+++...++. +.. ....++||||||..++.++.++|+.+.+++.+++......
T Consensus 122 ~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~~------------------------- 176 (331)
T 3gff_A 122 EKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDS------------------------- 176 (331)
T ss_dssp HHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTTT-------------------------
T ss_pred HHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCCh-------------------------
Confidence 3444445543 332 2347999999999999999999999999999988653211
Q ss_pred HHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCC-------C
Q 018947 184 LLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF-------H 256 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~-------~ 256 (348)
..+.+....... .......|+++.+|+.|.. +
T Consensus 177 -------------------~~~~~~~~~~~~----------------------~~~~~~~~l~l~~G~~d~~~~~~~~~~ 215 (331)
T 3gff_A 177 -------------------PHYLTLLEERVV----------------------KGDFKQKQLFMAIANNPLSPGFGVSSY 215 (331)
T ss_dssp -------------------THHHHHHHHHHH----------------------HCCCSSEEEEEEECCCSEETTTEECCH
T ss_pred -------------------HHHHHHHHHHhh----------------------cccCCCCeEEEEeCCCCCCCccchHHH
Confidence 001110000000 0012357999999999982 2
Q ss_pred --chHHHHHHhhccC-----CcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 257 --SEAVHMTSKIDRR-----YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 257 --~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
....++.+.+... ..++.++++.+|.... +..+.+.+..++....
T Consensus 216 ~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 216 HKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS--HIGLYDGIRHLFKDFA 267 (331)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH--HHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCCCCccccH--HHHHHHHHHHHHhhcC
Confidence 3345555555431 3778999999997665 6778888888888874
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.8e-07 Score=85.10 Aligned_cols=112 Identities=17% Similarity=0.143 Sum_probs=72.0
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCC-eEEEEeCCC----CCCCCCCCCC---CCCCCCCHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN-FCIYHINPP----GHEFGAAAIS---DDEPVLSVDDLADQIAEV 112 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g-~~vi~~D~~----G~G~S~~~~~---~~~~~~~~~~~~~dl~~~ 112 (348)
..|+||++||.+....+.....+ ....+..+| +.|+++|+| |++.+..... .......+.|....+..+
T Consensus 98 ~~Pviv~iHGGg~~~g~~~~~~~---~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv 174 (498)
T 2ogt_A 98 KRPVLFWIHGGAFLFGSGSSPWY---DGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWV 174 (498)
T ss_dssp CEEEEEEECCSTTTSCCTTCGGG---CCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCccCCCCCCCCcC---CHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHH
Confidence 45899999998732211111010 113455555 999999999 8876643211 011234466666666555
Q ss_pred HHH---cC--CCceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCC
Q 018947 113 LNH---FG--LGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (348)
Q Consensus 113 l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (348)
.+. ++ .++|.|+|+|.||.+++.++... ...++++|+.++...
T Consensus 175 ~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 175 KENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 544 33 35799999999999998887753 457999999998665
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.8e-07 Score=84.83 Aligned_cols=111 Identities=17% Similarity=0.137 Sum_probs=68.3
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccC-CeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
..|+||++||.+..........+ ....+..+ ++.|+++|+| |++.+............+.|....+..+.+.
T Consensus 96 ~~PviV~iHGGg~~~g~~~~~~~---~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~ 172 (489)
T 1qe3_A 96 NLPVMVWIHGGAFYLGAGSEPLY---DGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVREN 172 (489)
T ss_dssp SEEEEEEECCSTTTSCCTTSGGG---CCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCccccCCCCCccc---CHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHH
Confidence 35899999996632111111010 11345555 4999999999 5654432101112234455665555444433
Q ss_pred ---cC--CCceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCC
Q 018947 116 ---FG--LGAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLC 154 (348)
Q Consensus 116 ---l~--~~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 154 (348)
++ .++|.|+|||+||.++..++... ++.++++|+.++..
T Consensus 173 i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 173 ISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 33 35799999999999998777643 56899999999876
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=4.7e-07 Score=77.02 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=32.2
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcc-eEEEecCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVL-GLILVSPLC 154 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~-~lvl~~~~~ 154 (348)
++|+|.|+|+||++++.++..+|+.++ ++++++..+
T Consensus 11 ~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p 47 (318)
T 2d81_A 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGP 47 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCC
T ss_pred ceEEEEEECHHHHHHHHHHHHCchhhhccceEEeccc
Confidence 689999999999999999999999999 888777643
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=7.3e-06 Score=69.17 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=67.6
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCC-------CCCCC------------CCCCCH
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-------AISDD------------EPVLSV 102 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~-------~~~~~------------~~~~~~ 102 (348)
-|+|.++||++++...|..... ........+..++.+|..-.+.-.. ..... ...+.+
T Consensus 49 ~PVLYlLhG~~~~~~~w~~~~~---~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~ 125 (299)
T 4fol_A 49 IPTVFYLSGLTCTPDNASEKAF---WQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQM 125 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHSC---HHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBH
T ss_pred cCEEEEECCCCCChHHHHHhch---HhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccH
Confidence 4899999999999988843221 1112233478888887432111000 00000 011233
Q ss_pred H-HHHHHHHHHHHH-cCC---------CceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCC
Q 018947 103 D-DLADQIAEVLNH-FGL---------GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (348)
Q Consensus 103 ~-~~~~dl~~~l~~-l~~---------~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (348)
+ .+++++..+++. +.. ++..|.||||||.-|+.+|.++ |++..++...++...
T Consensus 126 ~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 126 YDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccC
Confidence 3 356677777743 322 4578999999999999999985 567777777666554
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.52 E-value=6.2e-07 Score=91.20 Aligned_cols=206 Identities=12% Similarity=0.056 Sum_probs=110.8
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-C
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-G 119 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~ 119 (348)
..++++|+|+.++....+ ..+ ...+. .+.|++++.++. +++++...+.+..+.. .
T Consensus 1057 ~~~~L~~l~~~~g~~~~y-~~l------a~~L~-~~~v~~l~~~~~----------------~~~~~~~~~~i~~~~~~g 1112 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGLMY-QNL------SSRLP-SYKLCAFDFIEE----------------EDRLDRYADLIQKLQPEG 1112 (1304)
T ss_dssp SCCEEECCCCTTCBGGGG-HHH------HTTCC-SCEEEECBCCCS----------------TTHHHHHHHHHHHHCCSS
T ss_pred cCCcceeecccccchHHH-HHH------Hhccc-ccceEeecccCH----------------HHHHHHHHHHHHHhCCCC
Confidence 567899999988776443 112 34445 788998877433 2233444455555543 5
Q ss_pred ceeEEEeChhHHHHHHHHHhC---CCCcceEEEecCCCCCCCh--HHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccc
Q 018947 120 AVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAPSW--TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEV 194 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (348)
++.++|||+||.+|.++|.+. ...+..++++++....... ......... ..+.. ......
T Consensus 1113 p~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~~~~~~~~--------------~~l~~-~~~~~~ 1177 (1304)
T 2vsq_A 1113 PLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSDLDGRTVESDV--------------EALMN-VNRDNE 1177 (1304)
T ss_dssp CEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC-----CHHHHH--------------HHHHT-TCC---
T ss_pred CeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCcccccccccccccchhhH--------------HHHHH-hhhhhh
Confidence 899999999999999998754 4568999999875432211 000000000 00111 000000
Q ss_pred cCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc-hHHHHHHhhccCCcEE
Q 018947 195 RGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS-EAVHMTSKIDRRYSAL 273 (348)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~-~~~~~~~~~~~~~~~~ 273 (348)
..............+.. .+..... ... -..+++|++++.|+.|.... ....+.+... ...++
T Consensus 1178 ~~~~~~l~~~~l~~~~~------------~~~~~~~---~~~-~~~~~~pv~l~~~~~~~~~~~~~~~W~~~~~-~~~~~ 1240 (1304)
T 2vsq_A 1178 ALNSEAVKHGLKQKTHA------------FYSYYVN---LIS-TGQVKADIDLLTSGADFDIPEWLASWEEATT-GVYRM 1240 (1304)
T ss_dssp ----CTTTGGGHHHHHH------------HHHHHHC---------CBSSEEEEEECSSCCCCCSSEECSSTTBS-SCCCE
T ss_pred hhcchhcchHHHHHHHH------------HHHHHHH---Hhc-cCCcCCCEEEEEecCccccccchhhHHHHhC-CCeEE
Confidence 00000001111111111 1111111 000 15678999999999886331 1112222222 23678
Q ss_pred EEecCCCCCccccCh--hhhHHHHHHHHhhcc
Q 018947 274 VEVQACGSMVTEEQP--HAMLIPMEYFLMGYG 303 (348)
Q Consensus 274 ~~~~~~gH~~~~e~p--~~~~~~i~~fl~~~~ 303 (348)
+.++ ++|+.+++.| +++++.|.+||.+..
T Consensus 1241 ~~v~-G~H~~ml~~~~~~~~a~~l~~~L~~~~ 1271 (1304)
T 2vsq_A 1241 KRGF-GTHAEMLQGETLDRNAEILLEFLNTQT 1271 (1304)
T ss_dssp EECS-SCTTGGGSHHHHHHHHHHHHHHHHCCC
T ss_pred EEeC-CCHHHHCCCHHHHHHHHHHHHHHhccc
Confidence 8887 8999888755 489999999998764
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=2.8e-06 Score=69.12 Aligned_cols=128 Identities=10% Similarity=-0.004 Sum_probs=83.3
Q ss_pred CceeEEEEcc----CCCCCeEEEeCCCCCChhhhcccc-ccchhh-----------hhhccCCeEEEEeCC-CCCCCCCC
Q 018947 29 HGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGL-FFCPEA-----------CSLLLHNFCIYHINP-PGHEFGAA 91 (348)
Q Consensus 29 ~~~l~~~~~g----~~~~p~vvllHG~~~~~~~~~~~~-~~~~~~-----------~~~~~~g~~vi~~D~-~G~G~S~~ 91 (348)
+..+.|..+. +.++|++++++|.++.+..++-.+ -..|.. .....+...|+.+|. .|.|.|-.
T Consensus 31 ~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~ 110 (255)
T 1whs_A 31 GRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYT 110 (255)
T ss_dssp TEEEEEEEECCCGGGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCEE
T ss_pred CcEEEEEEEEecCCCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCCC
Confidence 4577776553 246799999999887765431000 000000 112234578999996 59999864
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH-------cCCCceeEEEeChhHHHHHHHHHhC------CCCcceEEEecCCCCC
Q 018947 92 AISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKY------RHRVLGLILVSPLCKA 156 (348)
Q Consensus 92 ~~~~~~~~~~~~~~~~dl~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~ 156 (348)
.........+.++.++|+.++++. +...+++|.|+|+||..+..+|..- .-.++++++.++....
T Consensus 111 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~ 188 (255)
T 1whs_A 111 NTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDD 188 (255)
T ss_dssp SSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBH
T ss_pred cCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCH
Confidence 422111135778888888877753 3457899999999999988887632 2358999999987764
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=3.8e-07 Score=76.57 Aligned_cols=34 Identities=12% Similarity=-0.032 Sum_probs=31.3
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (348)
+++.++||||||.+++.++.+ |+.+++++++++.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 458999999999999999999 9999999998875
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.5e-06 Score=80.00 Aligned_cols=108 Identities=19% Similarity=0.113 Sum_probs=69.3
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG----HEFGAAAISDDEPVLSVDDLADQIAEVLNH-- 115 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G----~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-- 115 (348)
.|+||++||.+....+.....+ ....++..|+.|+++|+|. +..+.. ........+.|....+..+.+.
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~---~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~--~~~~~n~gl~D~~~al~wv~~~i~ 189 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLH---GPEYLVSKDVIVITFNYRLNVYGFLSLNS--TSVPGNAGLRDMVTLLKWVQRNAH 189 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTC---BCTTGGGGSCEEEEECCCCHHHHHCCCSS--SSCCSCHHHHHHHHHHHHHHHHTG
T ss_pred CCEEEEEcCCccccCCCccccc---CHHHHHhCCeEEEEeCCcCCccccccCcc--cCCCCchhHHHHHHHHHHHHHHHH
Confidence 5799999996543221111111 1134556899999999994 222211 1112335566766666555443
Q ss_pred -cCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCC
Q 018947 116 -FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLC 154 (348)
Q Consensus 116 -l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 154 (348)
++. ++|.|+|+|.||.++..++.. .+..++++|+.++..
T Consensus 190 ~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 190 FFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred HhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 443 579999999999999988765 456799999998764
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2.3e-05 Score=67.81 Aligned_cols=40 Identities=8% Similarity=-0.095 Sum_probs=33.1
Q ss_pred CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 117 GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 117 ~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
+.++|.++|||+||..++.+++.. +||+.+|..++.....
T Consensus 217 D~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~G~ 256 (433)
T 4g4g_A 217 DTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAGGA 256 (433)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTTTT
T ss_pred ChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCCch
Confidence 346899999999999999888876 4899999988765543
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=0.00059 Score=60.12 Aligned_cols=129 Identities=9% Similarity=0.053 Sum_probs=78.8
Q ss_pred eeecC--CceeEEEEcc----CCCCCeEEEeCCCCCChhhhccccccchhh----------hhhccCCeEEEEeC-CCCC
Q 018947 24 LIKTS--HGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGLFFCPEA----------CSLLLHNFCIYHIN-PPGH 86 (348)
Q Consensus 24 ~v~~~--~~~l~~~~~g----~~~~p~vvllHG~~~~~~~~~~~~~~~~~~----------~~~~~~g~~vi~~D-~~G~ 86 (348)
++.++ +..+.|..+. +.++|++|+++|.++.+..+....-..+.. .....+-..++-+| ..|.
T Consensus 20 Yv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvGt 99 (421)
T 1cpy_A 20 YLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNV 99 (421)
T ss_dssp EEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTTS
T ss_pred EEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecCCCcc
Confidence 44443 4567776543 246789999999877655431100000100 01112345799999 4699
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------cCC--CceeEEEeChhHHHHHHHHHhCC------CCcceEEEec
Q 018947 87 EFGAAAISDDEPVLSVDDLADQIAEVLNH-------FGL--GAVMCMGVTAGAYILTLFAMKYR------HRVLGLILVS 151 (348)
Q Consensus 87 G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-------l~~--~~v~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~ 151 (348)
|.|-.... ...+.++.++|+.++++. +.. .+++|.|.|+||..+-.+|..-- -.++++.+-+
T Consensus 100 GfSy~~~~---~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGN 176 (421)
T 1cpy_A 100 GFSYSGSS---GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGN 176 (421)
T ss_dssp TTCEESSC---CCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEES
T ss_pred cccCCCCC---CCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecC
Confidence 98864322 134556667777666643 233 68999999999999888876431 2478988877
Q ss_pred CCCC
Q 018947 152 PLCK 155 (348)
Q Consensus 152 ~~~~ 155 (348)
+...
T Consensus 177 g~~d 180 (421)
T 1cpy_A 177 GLTD 180 (421)
T ss_dssp CCCC
T ss_pred cccC
Confidence 6654
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.20 E-value=2.5e-06 Score=78.39 Aligned_cols=109 Identities=16% Similarity=0.097 Sum_probs=67.9
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~- 115 (348)
.|+||++||.+..........+ ....+.. .|+.|+++|+| |++.+... +.......+.|....+..+.+.
T Consensus 112 ~Pviv~iHGGg~~~g~~~~~~~---~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~-~~~~~n~gl~D~~~al~wv~~~i 187 (543)
T 2ha2_A 112 TPVLIWIYGGGFYSGAASLDVY---DGRFLAQVEGAVLVSMNYRVGTFGFLALPGS-REAPGNVGLLDQRLALQWVQENI 187 (543)
T ss_dssp EEEEEEECCSTTTCCCTTSGGG---CTHHHHHHHCCEEEEECCCCHHHHHCCCTTC-SSCCSCHHHHHHHHHHHHHHHHG
T ss_pred CeEEEEECCCccccCCCCCCcC---ChHHHHhcCCEEEEEecccccccccccCCCC-CCCCCcccHHHHHHHHHHHHHHH
Confidence 4899999997643222111111 1123443 69999999999 34433100 1112334566666655555443
Q ss_pred --cCC--CceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCC
Q 018947 116 --FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLC 154 (348)
Q Consensus 116 --l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 154 (348)
++. ++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 188 ~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 188 AAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 343 5899999999999998776643 56799999998754
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=3.5e-06 Score=77.43 Aligned_cols=108 Identities=17% Similarity=0.127 Sum_probs=69.2
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
..|+||++||.+........ +.. ..++. .|+.|+++|+| |++.+... .......+.|....+..+.+.
T Consensus 114 ~~Pv~v~iHGG~~~~g~~~~---~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~--~~~~n~gl~D~~~al~wv~~n 186 (542)
T 2h7c_A 114 RLPVMVWIHGGGLMVGAAST---YDG--LALAAHENVVVVTIQYRLGIWGFFSTGDE--HSRGNWGHLDQVAALRWVQDN 186 (542)
T ss_dssp CEEEEEEECCSTTTSCCSTT---SCC--HHHHHHHTCEEEEECCCCHHHHHCCCSST--TCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCccc---cCH--HHHHhcCCEEEEecCCCCccccCCCCCcc--cCccchhHHHHHHHHHHHHHH
Confidence 45799999997643222111 101 13333 69999999999 55433211 112234566666555544433
Q ss_pred ---cCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCC
Q 018947 116 ---FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (348)
Q Consensus 116 ---l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (348)
++. ++|.|+|+|.||.++..++.. .++.++++|+.++...
T Consensus 187 i~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 187 IASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 443 579999999999999988875 3678999999987654
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.16 E-value=6.4e-06 Score=75.58 Aligned_cols=111 Identities=14% Similarity=0.064 Sum_probs=70.2
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
..|+||++||.+....+.....+. ...+. ..|+.|+++++| |++.+... ........+.|....+..+.+.
T Consensus 108 ~~Pv~v~iHGG~~~~g~~~~~~~~---~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~-~~~~~n~gl~D~~~al~wv~~n 183 (537)
T 1ea5_A 108 STTVMVWIYGGGFYSGSSTLDVYN---GKYLAYTEEVVLVSLSYRVGAFGFLALHGS-QEAPGNVGLLDQRMALQWVHDN 183 (537)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGC---THHHHHHHTCEEEECCCCCHHHHHCCCTTC-SSSCSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCCCccC---hHHHHhcCCEEEEEeccCccccccccCCCC-CCCcCccccHHHHHHHHHHHHH
Confidence 458999999966433221111111 12344 569999999999 44333100 1112334567776666555444
Q ss_pred ---cCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCC
Q 018947 116 ---FGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (348)
Q Consensus 116 ---l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (348)
++. ++|.|+|+|.||..+..++.. ....++++|+.++...
T Consensus 184 i~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 184 IQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred HHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 443 689999999999999877764 3457999999998654
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.15 E-value=4e-06 Score=76.83 Aligned_cols=111 Identities=15% Similarity=0.067 Sum_probs=69.6
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
..|+||++||.+....+.....+. ...+.. .|+.|+++++| |++.+... +.......+.|....+..+.+.
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~~~~~~---~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~-~~~~~n~gl~D~~~al~wv~~~ 181 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSSLHVYD---GKFLARVERVIVVSMNYRVGALGFLALPGN-PEAPGNMGLFDQQLALQWVQKN 181 (529)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGC---THHHHHHHCCEEEEECCCCHHHHHCCCTTC-TTSCSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCccccCCCCccccC---hHHHhccCCeEEEEecccccccccccCCCC-CCCcCcccHHHHHHHHHHHHHH
Confidence 458999999976432221111111 123444 59999999999 44433100 1112334566766665555443
Q ss_pred ---cCC--CceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCC
Q 018947 116 ---FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (348)
Q Consensus 116 ---l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (348)
++. ++|.|+|+|.||..+..++... ...++++|+.++...
T Consensus 182 i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 182 IAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 444 5799999999999998887654 457999999988653
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.15 E-value=2.7e-06 Score=77.76 Aligned_cols=113 Identities=15% Similarity=0.084 Sum_probs=67.9
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~- 115 (348)
..|+||++||.+....+.. .+....+......|+.|+++|+| |++.+............+.|....+..+.+.
T Consensus 101 ~~Pviv~iHGGg~~~g~~~--~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni 178 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSNA--NYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYI 178 (522)
T ss_dssp CEEEEEEECCSTTTSCCSC--SCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCccccCCcc--ccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHH
Confidence 3589999999865432211 11111111223569999999999 4443321100011234566666655554443
Q ss_pred --cCC--CceeEEEeChhHHHHHHHHHhC----CCCcceEEEecCCCC
Q 018947 116 --FGL--GAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCK 155 (348)
Q Consensus 116 --l~~--~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~ 155 (348)
++. ++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 179 ~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 179 EQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 343 5799999999998777666543 567999999887653
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.1e-05 Score=66.20 Aligned_cols=38 Identities=5% Similarity=-0.060 Sum_probs=32.1
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
++|.++|||+||..++.+|+..+ ||+.+|..++.....
T Consensus 185 ~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~G~ 222 (375)
T 3pic_A 185 TKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAGGS 222 (375)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTT
T ss_pred hhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCCch
Confidence 68999999999999998888764 899999988765543
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=3.8e-05 Score=69.12 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=66.1
Q ss_pred CeEEEEeCCCCCCCCCCCC-----CCCCCCCCHHHHHHHHHHHHHHcC------CCceeEEEeChhHHHHHHHHHhCCCC
Q 018947 75 NFCIYHINPPGHEFGAAAI-----SDDEPVLSVDDLADQIAEVLNHFG------LGAVMCMGVTAGAYILTLFAMKYRHR 143 (348)
Q Consensus 75 g~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~~~~~dl~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~ 143 (348)
|--+|..++|-+|+|.+.. ...-...+.++..+|+..+++.+. ..|++++|-|+||++|..+-.+||+.
T Consensus 73 ~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~l 152 (472)
T 4ebb_A 73 GALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHL 152 (472)
T ss_dssp TCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTT
T ss_pred CCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCe
Confidence 7789999999999997521 112345789999999999886542 24899999999999999999999999
Q ss_pred cceEEEecCCCC
Q 018947 144 VLGLILVSPLCK 155 (348)
Q Consensus 144 v~~lvl~~~~~~ 155 (348)
|.+.+..+++..
T Consensus 153 v~ga~ASSApv~ 164 (472)
T 4ebb_A 153 VAGALAASAPVL 164 (472)
T ss_dssp CSEEEEETCCTT
T ss_pred EEEEEecccceE
Confidence 999998887664
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.87 E-value=8.6e-06 Score=74.80 Aligned_cols=113 Identities=20% Similarity=0.114 Sum_probs=66.3
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhc--cCCeEEEEeCCCCC--C--CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLL--LHNFCIYHINPPGH--E--FGAAAISDDEPVLSVDDLADQIAEVLN 114 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~--~~g~~vi~~D~~G~--G--~S~~~~~~~~~~~~~~~~~~dl~~~l~ 114 (348)
..|+||++||.+....... ..-....+...+ ..|+.|+++|+|.- | .+............+.|....+..+.+
T Consensus 121 ~~Pviv~iHGGg~~~g~~~-~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ 199 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSA-AYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CEEEEEEECCCTTCCSGGG-GCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCccccCCcc-ccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHH
Confidence 3579999999765433221 010001111111 24799999999952 1 110000001123456666666655544
Q ss_pred H---cCC--CceeEEEeChhHHHHHHHHHhC--------CCCcceEEEecCCC
Q 018947 115 H---FGL--GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (348)
Q Consensus 115 ~---l~~--~~v~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~ 154 (348)
. ++. ++|.|+|+|.||.++..++... ...++++|+.++..
T Consensus 200 ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 200 NIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 3 343 5799999999999988777653 45799999998743
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=2.6e-05 Score=72.27 Aligned_cols=112 Identities=17% Similarity=0.048 Sum_probs=67.3
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCC----CCCCCCCC-----CCCCCCCCCHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPP----GHEFGAAA-----ISDDEPVLSVDDLADQIA 110 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~----G~G~S~~~-----~~~~~~~~~~~~~~~dl~ 110 (348)
..|+||++||.+....+.....+. ...+.. .|+.|+++|+| |+...... .........+.|....+.
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~---~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~ 216 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYN---ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 216 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGC---CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCC---chhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHH
Confidence 458999999976432221111111 123333 58999999999 44322100 011122345666665555
Q ss_pred HHHHH---cCC--CceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCC
Q 018947 111 EVLNH---FGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (348)
Q Consensus 111 ~~l~~---l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (348)
.+.+. ++. ++|.|+|+|.||..+..++... ...++++|+.++...
T Consensus 217 wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~~ 268 (585)
T 1dx4_A 217 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 268 (585)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhccccC
Confidence 55443 343 5799999999999888776643 357899999887654
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1.4e-05 Score=73.26 Aligned_cols=113 Identities=14% Similarity=0.046 Sum_probs=65.9
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhh--hccCCeEEEEeCCCCC--CC--CCCCCCCCCCCCCHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACS--LLLHNFCIYHINPPGH--EF--GAAAISDDEPVLSVDDLADQIAEVLN 114 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~--~~~~g~~vi~~D~~G~--G~--S~~~~~~~~~~~~~~~~~~dl~~~l~ 114 (348)
..|+||++||.+....+... .-....+.. ....|+.|+++|+|.- |. +............+.|....+..+.+
T Consensus 113 ~~Pv~v~iHGGg~~~g~~~~-~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ 191 (534)
T 1llf_A 113 NLPVMLWIFGGGFEIGSPTI-FPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVAD 191 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGG-SCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcccCCCcc-cCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHH
Confidence 34899999997754322111 100001111 1235899999999942 21 10000001123456666666655554
Q ss_pred H---cCC--CceeEEEeChhHHHHHHHHHhC--------CCCcceEEEecCCC
Q 018947 115 H---FGL--GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (348)
Q Consensus 115 ~---l~~--~~v~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~ 154 (348)
. ++. ++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 192 ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 192 NIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 3 443 5799999999998777666553 55799999998754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=3e-06 Score=90.43 Aligned_cols=94 Identities=18% Similarity=0.209 Sum_probs=0.0
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LG 119 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~~ 119 (348)
.+++++|+|+.++....+ ..+ ...+. ..|+.+..+|. ....+++++++++.+.+..+. ..
T Consensus 2241 ~~~~Lfc~~~agG~~~~y-~~l------~~~l~--~~v~~lq~pg~----------~~~~~i~~la~~~~~~i~~~~p~g 2301 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVF-HGL------AAKLS--IPTYGLQCTGA----------APLDSIQSLASYYIECIRQVQPEG 2301 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHHH-HHH------HHhhC--CcEEEEecCCC----------CCCCCHHHHHHHHHHHHHHhCCCC
Confidence 456899999988776432 222 22232 78888888872 123577888888777776654 36
Q ss_pred ceeEEEeChhHHHHHHHHHhCCC---Ccc---eEEEecCC
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRH---RVL---GLILVSPL 153 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~---~v~---~lvl~~~~ 153 (348)
++.++|||+||.+|.++|.+-.. .+. .++++++.
T Consensus 2302 py~L~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2302 PYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp ----------------------------------------
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 89999999999999999975432 344 67777753
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=7.3e-05 Score=62.06 Aligned_cols=100 Identities=14% Similarity=0.074 Sum_probs=57.4
Q ss_pred cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEE-eCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 018947 38 GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYH-INPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (348)
Q Consensus 38 g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~-~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~- 115 (348)
....+..||.+||... ...| +...++.+.. .|.++.+.- .. .....+..+.+++..+++.
T Consensus 70 ~~~~~~iVva~RGT~~-~~d~------------l~d~~~~~~~~~~~~~~~~v----h~-Gf~~~~~~~~~~~~~~~~~~ 131 (269)
T 1tib_A 70 DNTNKLIVLSFRGSRS-IENW------------IGNLNFDLKEINDICSGCRG----HD-GFTSSWRSVADTLRQKVEDA 131 (269)
T ss_dssp ETTTTEEEEEECCCSC-THHH------------HTCCCCCEEECTTTSTTCEE----EH-HHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEEEeCCCC-HHHH------------HHhcCeeeeecCCCCCCCEe----cH-HHHHHHHHHHHHHHHHHHHH
Confidence 3345678899999853 2222 2233555555 465542110 00 0112344555566555543
Q ss_pred ---cCCCceeEEEeChhHHHHHHHHHhCCC---CcceEEEecCCCC
Q 018947 116 ---FGLGAVMCMGVTAGAYILTLFAMKYRH---RVLGLILVSPLCK 155 (348)
Q Consensus 116 ---l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 155 (348)
....+++++||||||.+|..++..... .+..+++-+|...
T Consensus 132 ~~~~~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~vg 177 (269)
T 1tib_A 132 VREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVG 177 (269)
T ss_dssp HHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCCCB
T ss_pred HHHCCCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCCCC
Confidence 344589999999999999999987643 3665555555443
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.75 E-value=4.3e-05 Score=70.53 Aligned_cols=110 Identities=16% Similarity=0.098 Sum_probs=66.1
Q ss_pred CCCeEEEeCCCCCChhhhccc-----cccchhhhhhcc-CCeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQG-----LFFCPEACSLLL-HNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIA 110 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~-----~~~~~~~~~~~~-~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~ 110 (348)
..|+||++||.+....+.... ..+ . ...+.. .++.|+++++| |++.+... .....+.+.|....+.
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~-~-~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~--~~pgn~gl~D~~~Al~ 172 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLY-D-GEEIATRGNVIVVTFNYRVGPLGFLSTGDS--NLPGNYGLWDQHMAIA 172 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGG-C-CHHHHHHHTCEEEEECCCCHHHHHCCCSST--TCCCCHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCcccccccccc-C-hHHHhcCCCEEEEEeCCccccccCCcCCCC--CCCCccchHHHHHHHH
Confidence 358999999976432221100 000 0 122333 47999999999 44433211 1112334667766665
Q ss_pred HHHH---HcCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCC
Q 018947 111 EVLN---HFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLC 154 (348)
Q Consensus 111 ~~l~---~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 154 (348)
.+.+ .++. ++|.|+|+|.||..+..++.. ....+++.|+.++..
T Consensus 173 wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 173 WVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 5544 3443 579999999999999877764 356789999887643
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00034 Score=62.99 Aligned_cols=127 Identities=10% Similarity=0.037 Sum_probs=79.7
Q ss_pred CceeEEEEcc------CCCCCeEEEeCCCCCChhhhccccccchhh----------hhhccCCeEEEEeCC-CCCCCCCC
Q 018947 29 HGSLSVTIYG------DQDKPALVTYPDLALNYMSCFQGLFFCPEA----------CSLLLHNFCIYHINP-PGHEFGAA 91 (348)
Q Consensus 29 ~~~l~~~~~g------~~~~p~vvllHG~~~~~~~~~~~~~~~~~~----------~~~~~~g~~vi~~D~-~G~G~S~~ 91 (348)
+..+.|..+. +...|++|+++|.++.+..+....-..+.. .....+...|+.+|. .|.|.|-.
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~ 127 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVE 127 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCC
Confidence 4567766542 235799999999887665431100000000 011234568999996 69999865
Q ss_pred CCCCC------CCCCCHHHHHHHHHHHHHH-------cCCCceeEEEeChhHHHHHHHHHhC------------CCCcce
Q 018947 92 AISDD------EPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKY------------RHRVLG 146 (348)
Q Consensus 92 ~~~~~------~~~~~~~~~~~dl~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~------------p~~v~~ 146 (348)
..... ....+.++.++++..+++. +...+++|.|+|+||..+..+|... .-.+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkG 207 (483)
T 1ac5_A 128 QNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKA 207 (483)
T ss_dssp CCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEE
T ss_pred cCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceee
Confidence 32211 1224677888888777754 3447899999999999988877521 124789
Q ss_pred EEEecCCCC
Q 018947 147 LILVSPLCK 155 (348)
Q Consensus 147 lvl~~~~~~ 155 (348)
+.+.++...
T Consensus 208 i~IGNg~~d 216 (483)
T 1ac5_A 208 LLIGNGWID 216 (483)
T ss_dssp EEEEEECCC
T ss_pred eEecCCccc
Confidence 888777664
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00012 Score=67.69 Aligned_cols=106 Identities=17% Similarity=0.089 Sum_probs=66.8
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccC-CeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
..|+||++||.+....+.. .+. . ..+... ++.|+++|+| |+..+... .......+.|....+..+.+.
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~--~~~-~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~--~~~~n~gl~D~~~al~wv~~n 202 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGN--LYD-G--SVLASYGNVIVITVNYRLGVLGFLSTGDQ--AAKGNYGLLDLIQALRWTSEN 202 (574)
T ss_dssp CEEEEEECCCSSSSSCCGG--GSC-C--HHHHHHHTCEEEEECCCCHHHHHCCCSSS--SCCCCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCC--ccC-c--hhhhccCCEEEEEeCCcCcccccCcCCCC--CCCCcccHHHHHHHHHHHHHH
Confidence 3589999999765432221 111 1 233333 6999999999 33322111 112335677777666655543
Q ss_pred ---cCC--CceeEEEeChhHHHHHHHHHhCC---CCcceEEEecCC
Q 018947 116 ---FGL--GAVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPL 153 (348)
Q Consensus 116 ---l~~--~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~ 153 (348)
++. ++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 203 i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 203 IGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred HHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 443 57999999999999998876543 458888888754
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0051 Score=51.21 Aligned_cols=132 Identities=11% Similarity=0.011 Sum_probs=83.0
Q ss_pred cceeec-CCceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhh-----------hhccCCeEEEEeCCC-
Q 018947 22 DNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEAC-----------SLLLHNFCIYHINPP- 84 (348)
Q Consensus 22 ~~~v~~-~~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~-----------~~~~~g~~vi~~D~~- 84 (348)
.-++.. .+..++|+.+.. .+.|.||.+.|.++.+..+....-..+... ....+-.+++.+|.|
T Consensus 25 sGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~Pv 104 (300)
T 4az3_A 25 SGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPA 104 (300)
T ss_dssp EEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCST
T ss_pred eeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcCCC
Confidence 335555 345677776532 467899999988776543311000000000 001123579999976
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------cCCCceeEEEeChhHHHHHHHHHhCC----CCcceEEEecCC
Q 018947 85 GHEFGAAAISDDEPVLSVDDLADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKYR----HRVLGLILVSPL 153 (348)
Q Consensus 85 G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~ 153 (348)
|.|.|-... .....+..+.++|+..+++. +...+++|.|-|+||..+-.+|...- -.++++++.++.
T Consensus 105 GtGfSy~~~--~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 105 GVGFSYSDD--KFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp TSTTCEETT--CCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred cccccccCC--CcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 888886442 12345677888888777742 34578999999999999888887432 248898888876
Q ss_pred CC
Q 018947 154 CK 155 (348)
Q Consensus 154 ~~ 155 (348)
..
T Consensus 183 ~d 184 (300)
T 4az3_A 183 SS 184 (300)
T ss_dssp SB
T ss_pred cC
Confidence 65
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00055 Score=57.03 Aligned_cols=90 Identities=13% Similarity=0.019 Sum_probs=48.2
Q ss_pred EEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 018947 34 VTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL 113 (348)
Q Consensus 34 ~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l 113 (348)
|.......+..||.+||... ...|.. .-++.+...|....|.. .. .....+..+.+++.+.+
T Consensus 66 ~v~~~~~~~~iVvafRGT~~-~~d~~~------------d~~~~~~~~~~~~~~~v----h~-Gf~~~~~~~~~~~~~~l 127 (279)
T 1tia_A 66 YIAVDHTNSAVVLAFRGSYS-VRNWVA------------DATFVHTNPGLCDGCLA----EL-GFWSSWKLVRDDIIKEL 127 (279)
T ss_pred EEEEECCCCEEEEEEeCcCC-HHHHHH------------hCCcEeecCCCCCCCcc----Ch-hHHHHHHHHHHHHHHHH
Confidence 33334446678999999864 233321 11333333343221111 00 01112333444444444
Q ss_pred ----HHcCCCceeEEEeChhHHHHHHHHHhCC
Q 018947 114 ----NHFGLGAVMCMGVTAGAYILTLFAMKYR 141 (348)
Q Consensus 114 ----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p 141 (348)
+.....++++.|||+||.+|..+|....
T Consensus 128 ~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 128 KEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 3344468999999999999998888653
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0022 Score=52.53 Aligned_cols=125 Identities=14% Similarity=0.077 Sum_probs=73.1
Q ss_pred CceeEEEEccC-----CCCCeEEEeCCCCCChhhh-ccccccchhh-----------hhhccCCeEEEEeCC-CCCCCCC
Q 018947 29 HGSLSVTIYGD-----QDKPALVTYPDLALNYMSC-FQGLFFCPEA-----------CSLLLHNFCIYHINP-PGHEFGA 90 (348)
Q Consensus 29 ~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~-~~~~~~~~~~-----------~~~~~~g~~vi~~D~-~G~G~S~ 90 (348)
+..+.|..+.. .++|++++++|.++.+..+ ....-..+.. .....+-..|+-+|. .|.|.|-
T Consensus 36 ~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy 115 (270)
T 1gxs_A 36 GRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSY 115 (270)
T ss_dssp TEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCE
T ss_pred CcEEEEEEEEecCCCCCCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEeccccccccC
Confidence 45777765533 3578999999987766543 1000000000 011123467999995 6999886
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHH-------HcCCCceeEEEeChhHHHHHHHHH---hCC-----CCcceEEEecCCCC
Q 018947 91 AAISDDEPVLSVDDLADQIAEVLN-------HFGLGAVMCMGVTAGAYILTLFAM---KYR-----HRVLGLILVSPLCK 155 (348)
Q Consensus 91 ~~~~~~~~~~~~~~~~~dl~~~l~-------~l~~~~v~lvGhS~Gg~ia~~~a~---~~p-----~~v~~lvl~~~~~~ 155 (348)
..... ....+-++.++|+..+++ ++...+++|.|.| |-++.. +|. +.. -.++++++.++...
T Consensus 116 ~~~~~-~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~-la~~i~~~n~~~~~inLkGi~ign~~~d 192 (270)
T 1gxs_A 116 SNTSS-DLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQ-LSQVVYRNRNNSPFINFQGLLVSSGLTN 192 (270)
T ss_dssp ESSGG-GGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHH-HHHHHHHTTTTCTTCEEEEEEEESCCCB
T ss_pred CCCCc-cccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHH-HHHHHHhccccccceeeeeEEEeCCccC
Confidence 43221 113355666777666664 3445689999999 655433 443 111 24889999988776
Q ss_pred C
Q 018947 156 A 156 (348)
Q Consensus 156 ~ 156 (348)
.
T Consensus 193 ~ 193 (270)
T 1gxs_A 193 D 193 (270)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0015 Score=54.10 Aligned_cols=63 Identities=11% Similarity=0.071 Sum_probs=36.9
Q ss_pred CeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCceeEEEeChhHHHHHHHHHhC
Q 018947 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF----GLGAVMCMGVTAGAYILTLFAMKY 140 (348)
Q Consensus 75 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (348)
+..+...++||...... . ......+..+.+++...++.+ ...+++++||||||.+|..+|...
T Consensus 91 d~~~~~~~~p~~~~~~v--h-~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKV--H-KGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEE--c-HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 45566667777421110 0 011223445555555544332 334699999999999999888766
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00091 Score=50.11 Aligned_cols=63 Identities=22% Similarity=0.354 Sum_probs=50.5
Q ss_pred CCccEEEEecCCCCCCc--hHHHHHHhhcc----------------------CCcEEEEecCCCCCccccChhhhHHHHH
Q 018947 241 LQCRSLIFVGESSPFHS--EAVHMTSKIDR----------------------RYSALVEVQACGSMVTEEQPHAMLIPME 296 (348)
Q Consensus 241 i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~----------------------~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 296 (348)
-.+++|+..|+.|.+++ ..+...+.+.- .+.+++.+.++||++..++|++..+.+.
T Consensus 63 ~girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~ 142 (153)
T 1whs_B 63 AGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQ 142 (153)
T ss_dssp TTCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHH
T ss_pred cCceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHH
Confidence 36899999999999983 34445555531 1267889999999999999999999999
Q ss_pred HHHhhcc
Q 018947 297 YFLMGYG 303 (348)
Q Consensus 297 ~fl~~~~ 303 (348)
.||.+..
T Consensus 143 ~fl~~~~ 149 (153)
T 1whs_B 143 YFLQGKP 149 (153)
T ss_dssp HHHHTCC
T ss_pred HHHCCCC
Confidence 9998764
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0024 Score=52.82 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=26.8
Q ss_pred HHHHHHHHHHH----HHcCCCceeEEEeChhHHHHHHHHHhC
Q 018947 103 DDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKY 140 (348)
Q Consensus 103 ~~~~~dl~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~ 140 (348)
..+.+++...+ +.....++++.|||+||.+|..++...
T Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 117 EQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 33444444444 444456899999999999999888765
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0042 Score=51.12 Aligned_cols=45 Identities=18% Similarity=0.146 Sum_probs=29.7
Q ss_pred HHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC---CCCcceEEEecCC
Q 018947 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPL 153 (348)
Q Consensus 108 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~ 153 (348)
.+..+++.....++++.|||+||.+|..++... ..+|. ++..+++
T Consensus 114 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 114 LVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 344444444556899999999999999887753 23566 4444443
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0066 Score=45.51 Aligned_cols=64 Identities=16% Similarity=0.298 Sum_probs=48.1
Q ss_pred cCCccEEEEecCCCCCCc--hHHHHHHhhccC---------------------------CcEEEEecCCCCCccccChhh
Q 018947 240 KLQCRSLIFVGESSPFHS--EAVHMTSKIDRR---------------------------YSALVEVQACGSMVTEEQPHA 290 (348)
Q Consensus 240 ~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~---------------------------~~~~~~~~~~gH~~~~e~p~~ 290 (348)
.-.+++|+..|..|.+++ ..+...+.+.-. +.+++.+.++||++..++|++
T Consensus 61 ~~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~ 140 (155)
T 4az3_B 61 SQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLA 140 (155)
T ss_dssp TCCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHH
T ss_pred HcCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHH
Confidence 346799999999999983 333333333210 135788889999999999999
Q ss_pred hHHHHHHHHhhcc
Q 018947 291 MLIPMEYFLMGYG 303 (348)
Q Consensus 291 ~~~~i~~fl~~~~ 303 (348)
..+.+..||.+..
T Consensus 141 al~m~~~fl~g~p 153 (155)
T 4az3_B 141 AFTMFSRFLNKQP 153 (155)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999998753
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.01 Score=49.28 Aligned_cols=50 Identities=16% Similarity=0.086 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh----CCCCcceEEEecCCC
Q 018947 105 LADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK----YRHRVLGLILVSPLC 154 (348)
Q Consensus 105 ~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~~ 154 (348)
+.+.+..+++.....++++.|||+||.+|..+|.. .+.....++..+++.
T Consensus 124 ~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~Pr 177 (279)
T 3uue_A 124 IFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPR 177 (279)
T ss_dssp HHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCCC
T ss_pred HHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence 33444555555566789999999999999987753 344444555555433
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0075 Score=49.41 Aligned_cols=34 Identities=6% Similarity=0.200 Sum_probs=25.3
Q ss_pred HHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh
Q 018947 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 106 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
.+.+..+++.....++++.|||+||.+|..++..
T Consensus 111 ~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 111 ITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 3444555555556789999999999999977763
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.019 Score=46.53 Aligned_cols=105 Identities=18% Similarity=0.147 Sum_probs=60.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEe-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHI-NPPGHEFGAAAISDDEPVLSVDDLADQIAEVL----NH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~-D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l----~~ 115 (348)
++|+|++.||.+.....-. .. . ..+...+...+.+=.+ ++|-...+ ...+..+=++++...+ .+
T Consensus 2 ~~p~ii~ARGT~e~~~~Gp-G~-~-~~la~~l~~~~~~q~Vg~YpA~~~~--------y~~S~~~G~~~~~~~i~~~~~~ 70 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGP-GL-P-ADTARDVLDIYRWQPIGNYPAAAFP--------MWPSVEKGVAELILQIELKLDA 70 (254)
T ss_dssp CCCEEEEECCTTCCCTTSS-SH-H-HHHHTTSTTTSEEEECCSCCCCSSS--------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCC-Cc-H-HHHHHHHHHhcCCCccccccCcccC--------ccchHHHHHHHHHHHHHHHHhh
Confidence 5799999999877521100 00 0 1113444444544444 34433110 1113333344444444 44
Q ss_pred cCCCceeEEEeChhHHHHHHHHHh-----------CCCCcceEEEecCCCCC
Q 018947 116 FGLGAVMCMGVTAGAYILTLFAMK-----------YRHRVLGLILVSPLCKA 156 (348)
Q Consensus 116 l~~~~v~lvGhS~Gg~ia~~~a~~-----------~p~~v~~lvl~~~~~~~ 156 (348)
-...+++|.|+|.|+.++-.++.. ..++|.++++++-+...
T Consensus 71 CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r~ 122 (254)
T 3hc7_A 71 DPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMRQ 122 (254)
T ss_dssp CTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTCC
T ss_pred CCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCCC
Confidence 455799999999999999887765 23579999998865544
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.97 E-value=0.011 Score=49.68 Aligned_cols=35 Identities=14% Similarity=0.320 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh
Q 018947 105 LADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 105 ~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
+.+.+..+++.....++++.|||+||.+|..+|..
T Consensus 140 i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 140 IGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHH
Confidence 34455555665566789999999999999987764
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0092 Score=50.38 Aligned_cols=31 Identities=19% Similarity=0.168 Sum_probs=22.8
Q ss_pred HHHHHHHcCCCceeEEEeChhHHHHHHHHHh
Q 018947 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
+..+++.....++++.|||+||.+|..+|..
T Consensus 126 l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 126 VAKARKANPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHSSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCceEEeecCHHHHHHHHHHHH
Confidence 3334444445689999999999999987764
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=95.50 E-value=0.052 Score=42.08 Aligned_cols=81 Identities=9% Similarity=0.044 Sum_probs=53.4
Q ss_pred CCeEEEEe--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCC----CCcceE
Q 018947 74 HNFCIYHI--NPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR----HRVLGL 147 (348)
Q Consensus 74 ~g~~vi~~--D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~l 147 (348)
+...|+.+ ++|-.-..... ..........++...+......-...+++|+|+|.|+.++-..+...| ++|.++
T Consensus 51 ~~v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~av 129 (197)
T 3qpa_A 51 DGVWIQGVGGAYRATLGDNAL-PRGTSSAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGT 129 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEE
T ss_pred CceEEEeeCCCCcCCCCcccC-ccccHHHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEE
Confidence 45778888 78864211000 000011234555556666666666789999999999999988877665 689999
Q ss_pred EEecCCCC
Q 018947 148 ILVSPLCK 155 (348)
Q Consensus 148 vl~~~~~~ 155 (348)
++++-+..
T Consensus 130 vlfGdP~~ 137 (197)
T 3qpa_A 130 VLFGYTKN 137 (197)
T ss_dssp EEESCTTT
T ss_pred EEeeCCcc
Confidence 99886554
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=94.67 E-value=0.088 Score=39.43 Aligned_cols=62 Identities=16% Similarity=0.302 Sum_probs=47.2
Q ss_pred CccEEEEecCCCCCCc--hHHHHHHhhcc-----------C--------------CcEEEEecCCCCCccccChhhhHHH
Q 018947 242 QCRSLIFVGESSPFHS--EAVHMTSKIDR-----------R--------------YSALVEVQACGSMVTEEQPHAMLIP 294 (348)
Q Consensus 242 ~~Pvl~i~g~~D~~~~--~~~~~~~~~~~-----------~--------------~~~~~~~~~~gH~~~~e~p~~~~~~ 294 (348)
.+++|+..|+.|.+++ ..+...+.+.- . +.+++.+.++||++..++|++..+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 6899999999999883 33333333311 0 1457788999999999999999999
Q ss_pred HHHHHhhcc
Q 018947 295 MEYFLMGYG 303 (348)
Q Consensus 295 i~~fl~~~~ 303 (348)
+..|+.+..
T Consensus 146 ~~~fl~g~~ 154 (158)
T 1gxs_B 146 FKQFLKGEP 154 (158)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHcCCC
Confidence 999998864
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.18 Score=38.72 Aligned_cols=85 Identities=6% Similarity=0.067 Sum_probs=51.6
Q ss_pred hhccCCeEEEEeC--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCC----CC
Q 018947 70 SLLLHNFCIYHIN--PPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR----HR 143 (348)
Q Consensus 70 ~~~~~g~~vi~~D--~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~ 143 (348)
..+.....|+.++ +|-.-..... ......-..++....+....++-...+++|+|+|.|+.++-..+...| ++
T Consensus 43 ~~~~~~v~v~~V~~~YpA~~~~~~~-~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~ 121 (187)
T 3qpd_A 43 LARSGDVACQGVGPRYTADLPSNAL-PEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDK 121 (187)
T ss_dssp HHSTTCEEEEECCSSCCCCGGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHH
T ss_pred HHcCCCceEEeeCCcccCcCccccc-cccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhh
Confidence 3334457899998 8753210000 000000123334444444555666689999999999999988776554 46
Q ss_pred cceEEEecCCCC
Q 018947 144 VLGLILVSPLCK 155 (348)
Q Consensus 144 v~~lvl~~~~~~ 155 (348)
|.++++++-+..
T Consensus 122 V~avvlfGdP~~ 133 (187)
T 3qpd_A 122 IKGVVLFGYTRN 133 (187)
T ss_dssp EEEEEEESCTTT
T ss_pred EEEEEEeeCCcc
Confidence 899999875544
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=94.28 E-value=0.1 Score=40.56 Aligned_cols=81 Identities=7% Similarity=0.073 Sum_probs=52.1
Q ss_pred CCeEEEEe--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCC----CCcceE
Q 018947 74 HNFCIYHI--NPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYR----HRVLGL 147 (348)
Q Consensus 74 ~g~~vi~~--D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~l 147 (348)
+...|+.+ ++|-.-..... ..........++...+.....+-...+++|+|+|.|+.++-..+...| ++|.++
T Consensus 59 ~~v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~av 137 (201)
T 3dcn_A 59 NDVWVQGVGGPYLADLASNFL-PDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGV 137 (201)
T ss_dssp GGEEEEECCTTCCCCSGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEE
T ss_pred CceEEEEeCCCccccCCcccc-cCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEE
Confidence 45778888 67754211000 000011234555566666666666789999999999999988776555 578899
Q ss_pred EEecCCCC
Q 018947 148 ILVSPLCK 155 (348)
Q Consensus 148 vl~~~~~~ 155 (348)
++++-+..
T Consensus 138 vlfGdP~~ 145 (201)
T 3dcn_A 138 VLFGYTKN 145 (201)
T ss_dssp EEETCTTT
T ss_pred EEeeCccc
Confidence 99876554
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=94.12 E-value=0.12 Score=40.58 Aligned_cols=79 Identities=14% Similarity=0.073 Sum_probs=45.6
Q ss_pred CeEEEEeCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHH----HHHcCCCceeEEEeChhHHHHHHHHHh----------
Q 018947 75 NFCIYHINPPGHE-FGAAAISDDEPVLSVDDLADQIAEV----LNHFGLGAVMCMGVTAGAYILTLFAMK---------- 139 (348)
Q Consensus 75 g~~vi~~D~~G~G-~S~~~~~~~~~~~~~~~~~~dl~~~----l~~l~~~~v~lvGhS~Gg~ia~~~a~~---------- 139 (348)
+-.+..+++|-.. .+... .. ....+..+=++++... .++-...+++|+|+|.|+.++-..+..
T Consensus 35 g~~~~~V~YpA~~~~~~~~-~~-~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~ 112 (207)
T 1g66_A 35 GSTAEAINYPACGGQSSCG-GA-SYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTN 112 (207)
T ss_dssp TCEEEECCCCCCSSCGGGT-SC-CHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCC
T ss_pred CCceEEeeccccccccccC-Cc-chhhhHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhccccccccccc
Confidence 4468888888642 21100 00 0011222333344433 344456789999999999999877641
Q ss_pred ----CC----CCcceEEEecCCCC
Q 018947 140 ----YR----HRVLGLILVSPLCK 155 (348)
Q Consensus 140 ----~p----~~v~~lvl~~~~~~ 155 (348)
.| ++|.++++++-+..
T Consensus 113 ~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1g66_A 113 TAVQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp CSCCSCHHHHHHEEEEEEESCTTC
T ss_pred CCCCCChhhhccEEEEEEEcCCCc
Confidence 12 46888888876554
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=93.75 E-value=0.16 Score=39.91 Aligned_cols=77 Identities=16% Similarity=0.065 Sum_probs=45.9
Q ss_pred CeEEEEeCCCCCC-CCCCCCCCCCCCC--C----HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh--------
Q 018947 75 NFCIYHINPPGHE-FGAAAISDDEPVL--S----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-------- 139 (348)
Q Consensus 75 g~~vi~~D~~G~G-~S~~~~~~~~~~~--~----~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-------- 139 (348)
+-.+..+++|-.. .+. . . ...| + ..++.+.+....++-...+++|+|+|.|+.++-..+..
T Consensus 35 g~~~~~V~YpA~~~~~~-~-~--~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i 110 (207)
T 1qoz_A 35 GTTSEAIVYPACGGQAS-C-G--GISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGI 110 (207)
T ss_dssp TEEEEECCSCCCSSCGG-G-T--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTB
T ss_pred CCceEEeeccccccccc-c-C--CccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccc
Confidence 4578888888742 211 0 0 0112 2 22333334444444456799999999999999877641
Q ss_pred ------CC----CCcceEEEecCCCC
Q 018947 140 ------YR----HRVLGLILVSPLCK 155 (348)
Q Consensus 140 ------~p----~~v~~lvl~~~~~~ 155 (348)
.| ++|.++++++-+..
T Consensus 111 ~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1qoz_A 111 TNTAVPLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp CCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred cCCCCCCChHHhccEEEEEEEcCCcc
Confidence 11 35888888876544
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=92.93 E-value=0.21 Score=39.14 Aligned_cols=71 Identities=15% Similarity=0.071 Sum_probs=45.8
Q ss_pred CeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHcCCCceeEEEeChhHHHHHHHHHhC--C----CCc
Q 018947 75 NFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKY--R----HRV 144 (348)
Q Consensus 75 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~--p----~~v 144 (348)
|-....+++|-.- . .. + .+=++++...+ ++-...+++|+|+|.|+.++-..+... + ++|
T Consensus 40 g~~~~~V~YpA~~------~--y~--S-~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V 108 (205)
T 2czq_A 40 GGTIYNTVYTADF------S--QN--S-AAGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAV 108 (205)
T ss_dssp SEEEEECCSCCCT------T--CC--C-HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHE
T ss_pred CCCceeecccccC------C--Cc--C-HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhE
Confidence 3345777777531 0 11 3 44444444444 444567999999999999988877654 3 469
Q ss_pred ceEEEecCCCCC
Q 018947 145 LGLILVSPLCKA 156 (348)
Q Consensus 145 ~~lvl~~~~~~~ 156 (348)
.++++++-+...
T Consensus 109 ~avvlfGdP~~~ 120 (205)
T 2czq_A 109 KGVFLIGNPDHK 120 (205)
T ss_dssp EEEEEESCTTCC
T ss_pred EEEEEEeCCCcC
Confidence 999999855443
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=92.78 E-value=0.14 Score=46.06 Aligned_cols=64 Identities=11% Similarity=0.142 Sum_probs=48.5
Q ss_pred CccEEEEecCCCCCCc--hHHHHHHhhc---------------------------c--------CCcEEEEecCCCCCcc
Q 018947 242 QCRSLIFVGESSPFHS--EAVHMTSKID---------------------------R--------RYSALVEVQACGSMVT 284 (348)
Q Consensus 242 ~~Pvl~i~g~~D~~~~--~~~~~~~~~~---------------------------~--------~~~~~~~~~~~gH~~~ 284 (348)
.++|||.+|+.|.+++ ..+...+.+. . .+.+++.+.++||++.
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 6899999999999983 2333322222 0 0146778899999999
Q ss_pred ccChhhhHHHHHHHHhhcccc
Q 018947 285 EEQPHAMLIPMEYFLMGYGLY 305 (348)
Q Consensus 285 ~e~p~~~~~~i~~fl~~~~~~ 305 (348)
.++|++..+.|..||.+..+.
T Consensus 452 ~dqP~~al~m~~~fl~~~~l~ 472 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSNDVMII 472 (483)
T ss_dssp HHCHHHHHHHHHHHTTCCEEE
T ss_pred chhHHHHHHHHHHHHCCcccc
Confidence 999999999999999987543
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=92.35 E-value=0.34 Score=40.36 Aligned_cols=82 Identities=17% Similarity=0.191 Sum_probs=48.6
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCCCC--CHH----HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh--------
Q 018947 74 HNFCIYHINPPGHEFGAAAISDDEPVL--SVD----DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-------- 139 (348)
Q Consensus 74 ~g~~vi~~D~~G~G~S~~~~~~~~~~~--~~~----~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-------- 139 (348)
....++.++++-.-..... ......| +.. ++.+.|.+..++-...+++|+|+|.|+.++-..+..
T Consensus 83 ~~v~v~~V~YPA~~~~~~~-~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~ 161 (302)
T 3aja_A 83 DRLQVYTTPYTAQFHNPFA-ADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPV 161 (302)
T ss_dssp TTEEEEECCCCCCCCCTTT-TCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSS
T ss_pred CcceEEecccccccccccc-ccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCC
Confidence 4677888888865211000 0000111 222 233333334444456799999999999998887743
Q ss_pred CCCCcceEEEecCCCCC
Q 018947 140 YRHRVLGLILVSPLCKA 156 (348)
Q Consensus 140 ~p~~v~~lvl~~~~~~~ 156 (348)
.+++|.+++|++-....
T Consensus 162 ~~~~V~aVvLfGdP~r~ 178 (302)
T 3aja_A 162 DEDLVLGVTLIADGRRQ 178 (302)
T ss_dssp CGGGEEEEEEESCTTCB
T ss_pred ChHHEEEEEEEeCCCCc
Confidence 24689999998865543
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=92.26 E-value=0.12 Score=44.18 Aligned_cols=22 Identities=14% Similarity=0.226 Sum_probs=18.9
Q ss_pred CCceeEEEeChhHHHHHHHHHh
Q 018947 118 LGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
..++++.|||+||.+|..+|..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 3679999999999999987764
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=90.70 E-value=0.037 Score=48.27 Aligned_cols=38 Identities=21% Similarity=0.315 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcCC--CceeEEEeChhHHHHHHHHHhC
Q 018947 103 DDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKY 140 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~ 140 (348)
+++.+.|..+++.... .++++.|||+||.+|..+|...
T Consensus 210 ~~Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 210 DQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 3444555556655433 4689999999999999777643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 348 | ||||
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 5e-04 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 0.003 |
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 38.5 bits (88), Expect = 5e-04
Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 8/143 (5%)
Query: 38 GDQDKPALVT---YPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94
G + + L + + P A + E
Sbjct: 19 GKESRECLFLLHGSGVDETTLVPLAR--RIAPTATLVAARGRIPQEDGFRWFERIDPTRF 76
Query: 95 DDEPVL-SVDDLADQIAEVLNHFGLGA--VMCMGVTAGAYILTLFAMKYRHRVLGLILVS 151
+ + +L A E GL +G + GA +++ + + V L+
Sbjct: 77 EQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLR 136
Query: 152 PLCKAPSWTEWLYNKVMSNLLYY 174
P+ + + ++
Sbjct: 137 PMPVLDHVPATDLAGIRTLIIAG 159
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 36.8 bits (83), Expect = 0.003
Identities = 20/198 (10%), Positives = 55/198 (27%), Gaps = 11/198 (5%)
Query: 113 LNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172
+ L + + G ++ M R LI+++ T+ ++ ++
Sbjct: 110 IERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPA 169
Query: 173 YYYGMC--------GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHF 224
+ + + +KR+ A + + + V
Sbjct: 170 DGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQR 229
Query: 225 LEAI--NGRPDISEGLRKLQCRSLIFVGESSP-FHSEAVHMTSKIDRRYSALVEVQACGS 281
+A IS ++ + +G + ++ + +E+ G
Sbjct: 230 DQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGH 289
Query: 282 MVTEEQPHAMLIPMEYFL 299
V E +++F
Sbjct: 290 FVQEFGEQVAREALKHFA 307
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 348 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.98 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.97 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.97 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.96 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.96 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.96 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.94 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.93 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.93 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.91 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.91 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.9 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.9 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.89 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.88 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.88 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.87 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.86 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.86 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.85 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.84 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.83 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.81 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.79 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.77 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.75 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.73 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.72 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.72 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.72 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.71 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.71 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.7 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.69 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.69 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.68 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.66 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.59 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.57 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.52 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.49 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.45 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.45 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.39 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.37 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.35 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.34 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.27 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.27 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.18 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.16 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.15 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.07 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.02 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.93 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.91 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.9 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.85 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.85 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.76 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.75 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.66 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.31 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.29 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.28 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.13 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.04 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.55 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.3 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.23 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.14 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 97.07 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 97.06 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.05 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.97 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.89 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.3 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.27 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 96.2 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.15 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.02 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 95.98 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 94.19 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 90.94 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 90.06 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=2.5e-37 Score=262.83 Aligned_cols=268 Identities=15% Similarity=0.147 Sum_probs=181.0
Q ss_pred cceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
+..+.+++.+++|..+|++++|+|||+||++.+...|...+ +..++.+||+|+++|+||||.|..+. .....++
T Consensus 2 e~~~~~g~~~i~y~~~G~~~~p~vvl~HG~~~~~~~~~~~~-----~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~ 75 (297)
T d1q0ra_ 2 ERIVPSGDVELWSDDFGDPADPALLLVMGGNLSALGWPDEF-----ARRLADGGLHVIRYDHRDTGRSTTRD-FAAHPYG 75 (297)
T ss_dssp EEEEEETTEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHH-----HHHHHTTTCEEEEECCTTSTTSCCCC-TTTSCCC
T ss_pred CeEEEECCEEEEEEEecCCCCCEEEEECCCCcChhHHHHHH-----HHHHHhCCCEEEEEeCCCCccccccc-ccccccc
Confidence 56788999999999999999999999999999887654322 24667789999999999999997542 2234589
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHH-----------
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN----------- 170 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~----------- 170 (348)
++++++|+..++++++.++++++||||||.+++.+|..+|++|+++|++++..................
T Consensus 76 ~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (297)
T d1q0ra_ 76 FGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQ 155 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCH
T ss_pred cchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhhH
Confidence 999999999999999999999999999999999999999999999999998776554433221111000
Q ss_pred -----HHH-hhccchh---HHHH-HHHhhhcccccCCCCCCChHHHHHHH-HHHhhhc--hhhHHHHHHHHcCCccHHhh
Q 018947 171 -----LLY-YYGMCGV---VKEL-LLKRYFSKEVRGNAQVPESDIVQACR-RLLDERQ--SSNVWHFLEAINGRPDISEG 237 (348)
Q Consensus 171 -----~~~-~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (348)
... ....... .... .....+....... ......... ....... ...............+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (297)
T d1q0ra_ 156 PFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPF----DDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAE 231 (297)
T ss_dssp HHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCC----CHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGG
T ss_pred HHHHHHHHhccccchhhHHHHHHHHHHhhhccccccc----hHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhh
Confidence 000 0000000 0000 0000000000000 111111111 1000000 00000000001112345567
Q ss_pred hccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 238 LRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 238 l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+.++++|+++|+|++|.++ ...+.+.+.+++ +++++++++||+++.|+|+++++.|.+||+.
T Consensus 232 l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 232 LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT--ARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp GGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTT--EEEEEETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred hhccCCceEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 8899999999999999988 456678888887 9999999999999999999999999999986
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=4.8e-37 Score=259.43 Aligned_cols=267 Identities=15% Similarity=0.171 Sum_probs=178.5
Q ss_pred CccceeecCCceeEEEEccCC-CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 20 GKDNLIKTSHGSLSVTIYGDQ-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~g~~-~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
..+.+++++|.+++|..+|++ ++|+|||+||++++...|+... ..++++||+|+++|+||||.|+.+ ...
T Consensus 2 ~~~~~~~~~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~~~~~~------~~~~~~~~~vi~~D~~G~G~S~~~---~~~ 72 (290)
T d1mtza_ 2 CIENYAKVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSL------RDMTKEGITVLFYDQFGCGRSEEP---DQS 72 (290)
T ss_dssp CEEEEEEETTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGG------GGGGGGTEEEEEECCTTSTTSCCC---CGG
T ss_pred CccCeEEECCEEEEEEEcCCCCCCCeEEEECCCCCchHHHHHHH------HHHHHCCCEEEEEeCCCCcccccc---ccc
Confidence 356789999999999999974 4578999999987776654433 567788999999999999999854 235
Q ss_pred CCCHHHHHHHHHHHHHHc-CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH----------H
Q 018947 99 VLSVDDLADQIAEVLNHF-GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK----------V 167 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----------~ 167 (348)
.++++++++|+.++++++ +.++++++||||||.+++.+|.++|++|++++++++....+......... .
T Consensus 73 ~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (290)
T d1mtza_ 73 KFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDA 152 (290)
T ss_dssp GCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHH
T ss_pred cccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHHHHH
Confidence 689999999999999987 68999999999999999999999999999999999876543222111000 0
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHH--------HcCCccHHhhhc
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEA--------INGRPDISEGLR 239 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~ 239 (348)
.....................++....... ....+........... ......... .....+....+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (290)
T d1mtza_ 153 IKKYGSSGSYENPEYQEAVNYFYHQHLLRS-EDWPPEVLKSLEYAER----RNVYRIMNGPNEFTITGTIKDWDITDKIS 227 (290)
T ss_dssp HHHHHHHTCTTCHHHHHHHHHHHHHHTSCS-SCCCHHHHHHHHHHHH----SSHHHHHTCSBTTBCCSTTTTCBCTTTGG
T ss_pred HHHhhhhccccchhHHHHHHHHhhhhhccc-ccchHHHHHHHHHHhh----hhhhhhhcchhHHhHhhhhhcccHHHHhh
Confidence 000000000000000111111111111000 0002222222111100 011111100 011134455678
Q ss_pred cCCccEEEEecCCCCCC-chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 240 KLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 240 ~i~~Pvl~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++++|+++++|++|.++ .....+.+.+++ +++++++++||++++|+|+++++.|.+||++.
T Consensus 228 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 228 AIKIPTLITVGEYDEVTPNVARVIHEKIAG--SELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp GCCSCEEEEEETTCSSCHHHHHHHHHHSTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred cccceEEEEEeCCCCCCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHHHh
Confidence 89999999999999987 445567888887 89999999999999999999999999999874
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=9.2e-37 Score=258.33 Aligned_cols=263 Identities=13% Similarity=0.142 Sum_probs=181.2
Q ss_pred CCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 19 ~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
+.+.++++++|.+++|..+|++++|+|||+||++++...|... ...+.++|+|+++|+||||.|+.+ ..
T Consensus 6 p~~~~~i~~~g~~i~y~~~G~~~~p~lvllHG~~~~~~~~~~~-------~~~L~~~~~vi~~d~~G~G~S~~~----~~ 74 (291)
T d1bn7a_ 6 PFDPHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNI-------IPHVAPSHRCIAPDLIGMGKSDKP----DL 74 (291)
T ss_dssp CCCCEEEEETTEEEEEEEESCSSSSCEEEECCTTCCGGGGTTT-------HHHHTTTSCEEEECCTTSTTSCCC----SC
T ss_pred CCCCeEEEECCEEEEEEEeCCCCCCeEEEECCCCCCHHHHHHH-------HHHHhcCCEEEEEeCCCCcccccc----cc
Confidence 3455789999999999999988899999999999998765422 355678999999999999999754 34
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHH-HHHHHHHHh---
Q 018947 99 VLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYN-KVMSNLLYY--- 174 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~--- 174 (348)
.++++++++|+.+++++++.++++++||||||.+++.+|.++|+++++++++++............. ......+..
T Consensus 75 ~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (291)
T d1bn7a_ 75 DYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADV 154 (291)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTH
T ss_pred ccchhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhh
Confidence 6899999999999999999999999999999999999999999999999999877654332211100 000000000
Q ss_pred -----hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHHcCC----------ccHHhhh
Q 018947 175 -----YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGR----------PDISEGL 238 (348)
Q Consensus 175 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~l 238 (348)
....... ............ .......+........ .............. .+....+
T Consensus 155 ~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T d1bn7a_ 155 GRELIIDQNAFI-EGVLPKCVVRPL-------TEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWL 226 (291)
T ss_dssp HHHHHTTSCHHH-HTHHHHTCSSCC-------CHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhhhH-Hhhhhhhccccc-------hHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhh
Confidence 0000000 111111111110 2222222222221111 11111211111110 1223446
Q ss_pred ccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 239 RKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 239 ~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.++++|+++++|++|.++ ...+.+++.+++ +++++++++||++++|+|+++++.|.+||+++
T Consensus 227 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 227 HQSPVPKLLFWGTPGVLIPPAEAARLAESLPN--CKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp HHCCSCEEEEEEEECSSSCHHHHHHHHHHSTT--EEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred hcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 789999999999999998 355568888887 99999999999999999999999999999986
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=1.2e-36 Score=256.77 Aligned_cols=269 Identities=15% Similarity=0.160 Sum_probs=177.4
Q ss_pred CCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC-CC
Q 018947 19 SGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD-DE 97 (348)
Q Consensus 19 ~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~-~~ 97 (348)
+..+..+.+++.++||...|++++|+|||+||++++...+. .|.. +...++++|+|+++|+||||.|+..... ..
T Consensus 3 ~~~~~~~~~~~~~~h~~~~G~~~~p~ivllHG~~~~~~~~~---~~~~-~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~ 78 (281)
T d1c4xa_ 3 EIIEKRFPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAAS---NWRP-IIPDLAENFFVVAPDLIGFGQSEYPETYPGH 78 (281)
T ss_dssp CCEEEEECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHHH---HHGG-GHHHHHTTSEEEEECCTTSTTSCCCSSCCSS
T ss_pred EEEEEEEccCCEEEEEEEEecCCCCEEEEECCCCCCCcHHH---HHHH-HHHHHhCCCEEEEEeCCCCcccccccccccc
Confidence 34566778888999999999999999999999987654431 0111 2455678999999999999999765221 11
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 98 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
...+++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++................ . ....
T Consensus 79 ~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~-~---~~~~ 154 (281)
T d1c4xa_ 79 IMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLL-A---FYAD 154 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHH-T---GGGS
T ss_pred chhhHHHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHH-H---hhhh
Confidence 23456788999999999999999999999999999999999999999999999987654322111111111 1 1111
Q ss_pred chh-HHHHHHHhhhc-ccccCCCCCCChHHHHHHHHHHhhhchhhH-HHHHHHHcC----CccHHhhhccCCccEEEEec
Q 018947 178 CGV-VKELLLKRYFS-KEVRGNAQVPESDIVQACRRLLDERQSSNV-WHFLEAING----RPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 178 ~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~l~~i~~Pvl~i~g 250 (348)
... .....+..+.. +..... .................... ......+.. .......+.++++|+|+|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 230 (281)
T d1c4xa_ 155 PRLTPYRELIHSFVYDPENFPG----MEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHG 230 (281)
T ss_dssp CCHHHHHHHHHTTSSCSTTCTT----HHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEE
T ss_pred cccchhhhhhhhhcccccccch----hhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEe
Confidence 111 01122222211 111100 11111111111111111111 111111111 12233557889999999999
Q ss_pred CCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 251 ESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++|.++ ...+.+.+.+++ +++++++++||++++|+|+++++.|.+||+.
T Consensus 231 ~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 231 RQDRIVPLDTSLYLTKHLKH--AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp TTCSSSCTHHHHHHHHHCSS--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred CCCCCcCHHHHHHHHHHCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 999988 356678888887 8999999999999999999999999999973
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=1.8e-36 Score=253.62 Aligned_cols=258 Identities=14% Similarity=0.118 Sum_probs=176.5
Q ss_pred ccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
.+++++++|.+++|...| ++|+|||+||++++...+.. | ......++++|+|+++|+||||.|+.+ ....
T Consensus 3 ~~~~~~~dg~~l~y~~~G--~g~~vvllHG~~~~~~~~~~---~-~~~~~~l~~~~~v~~~D~~G~G~S~~~----~~~~ 72 (268)
T d1j1ia_ 3 VERFVNAGGVETRYLEAG--KGQPVILIHGGGAGAESEGN---W-RNVIPILARHYRVIAMDMLGFGKTAKP----DIEY 72 (268)
T ss_dssp EEEEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHHHH---H-TTTHHHHTTTSEEEEECCTTSTTSCCC----SSCC
T ss_pred cCeEEEECCEEEEEEEEc--CCCeEEEECCCCCCccHHHH---H-HHHHHHHhcCCEEEEEcccccccccCC----cccc
Confidence 456789999999999999 56899999999876544311 1 112456688999999999999999754 3457
Q ss_pred CHHHHHHHHHHHHHHcCCC-ceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccch
Q 018947 101 SVDDLADQIAEVLNHFGLG-AVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (348)
+.+++++++.+++++++.+ +++++||||||.+++.+|.++|++|+++|++++............. .. ......
T Consensus 73 ~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~-----~~-~~~~~~ 146 (268)
T d1j1ia_ 73 TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRP-----II-NYDFTR 146 (268)
T ss_dssp CHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------------CCSCH
T ss_pred ccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhh-----hh-hhhhhh
Confidence 8999999999999999884 6899999999999999999999999999999987665433222110 00 011111
Q ss_pred hHHHHHHHhhhcccccCCCCCCChHHHH-HHHHHHhhhchhhHH---HHHHHHcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 180 VVKELLLKRYFSKEVRGNAQVPESDIVQ-ACRRLLDERQSSNVW---HFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
................. ...... .+............. .............+.+.++++|+++|+|++|.+
T Consensus 147 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~ 221 (268)
T d1j1ia_ 147 EGMVHLVKALTNDGFKI-----DDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKV 221 (268)
T ss_dssp HHHHHHHHHHSCTTCCC-----CHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSS
T ss_pred hhhHHHHHHHhhhhhhh-----hhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCC
Confidence 11111222222211111 222222 221111111111111 112222233444567889999999999999999
Q ss_pred C--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 256 H--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 256 ~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+ .....+.+.+++ +++++++++||++++|+|+++++.|.+||.+
T Consensus 222 ~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 222 VPVETAYKFLDLIDD--SWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp SCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 8 355568888887 9999999999999999999999999999975
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=1.5e-36 Score=256.21 Aligned_cols=254 Identities=14% Similarity=0.144 Sum_probs=175.3
Q ss_pred ceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 018947 30 GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQI 109 (348)
Q Consensus 30 ~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl 109 (348)
.+++|...| ++|+|||+||++.+...|.... ..+..++.+||+|+++|+||||.|..+. ...++...+++|+
T Consensus 20 ~~i~y~~~G--~G~~ivllHG~~~~~~~~~~~~---~~l~~~~~~g~~v~~~D~~G~G~S~~~~---~~~~~~~~~~~~i 91 (283)
T d2rhwa1 20 FNIHYNEAG--NGETVIMLHGGGPGAGGWSNYY---RNVGPFVDAGYRVILKDSPGFNKSDAVV---MDEQRGLVNARAV 91 (283)
T ss_dssp EEEEEEEEC--CSSEEEEECCCSTTCCHHHHHT---TTHHHHHHTTCEEEEECCTTSTTSCCCC---CSSCHHHHHHHHH
T ss_pred EEEEEEEEc--CCCeEEEECCCCCChhHHHHHH---HHHHHHHHCCCEEEEEeCCCCccccccc---ccccccchhhhhc
Confidence 479999999 5789999999999887763222 2235677899999999999999997542 2446777889999
Q ss_pred HHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH---HHHHHHHHHHHHhhccchhHHHHHH
Q 018947 110 AEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE---WLYNKVMSNLLYYYGMCGVVKELLL 186 (348)
Q Consensus 110 ~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (348)
.+++++++.++++++||||||.+++.+|.++|++|+++|++++....+.... ............. .........+
T Consensus 92 ~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 169 (283)
T d2rhwa1 92 KGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAE--PSYETLKQML 169 (283)
T ss_dssp HHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHS--CCHHHHHHHH
T ss_pred ccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhh--hhhhhHHHHH
Confidence 9999999999999999999999999999999999999999998764332110 0001111111111 1111112223
Q ss_pred HhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHH----HHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHH
Q 018947 187 KRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHF----LEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAV 260 (348)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~ 260 (348)
..++...... .++............ ....... ........+....+.++++|+++++|++|.++ ....
T Consensus 170 ~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 243 (283)
T d2rhwa1 170 QVFLYDQSLI-----TEELLQGRWEAIQRQ-PEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGL 243 (283)
T ss_dssp HHHCSCGGGC-----CHHHHHHHHHHHHHC-HHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHH
T ss_pred HHhhcccccC-----cHHHHHHHHHHhhhh-hhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHH
Confidence 3332222111 333333333222221 1111111 11112224556778899999999999999988 3555
Q ss_pred HHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 261 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 244 ~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 244 KLLWNIDD--ARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp HHHHHSSS--EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 68888877 9999999999999999999999999999985
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=6.1e-36 Score=250.73 Aligned_cols=254 Identities=15% Similarity=0.133 Sum_probs=174.5
Q ss_pred ceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
+++.++|.+++|+..| ++|+|||+||++.+...+.. | ......++++|+|+++|+||||.|..+. ...+++
T Consensus 6 ~~i~~~G~~~~Y~~~G--~G~pvvllHG~~~~~~~~~~---~-~~~~~~l~~~~~vi~~Dl~G~G~S~~~~---~~~~~~ 76 (271)
T d1uk8a_ 6 KSILAAGVLTNYHDVG--EGQPVILIHGSGPGVSAYAN---W-RLTIPALSKFYRVIAPDMVGFGFTDRPE---NYNYSK 76 (271)
T ss_dssp EEEEETTEEEEEEEEC--CSSEEEEECCCSTTCCHHHH---H-TTTHHHHTTTSEEEEECCTTSTTSCCCT---TCCCCH
T ss_pred CEEEECCEEEEEEEEe--eCCeEEEECCCCCCccHHHH---H-HHHHHHHhCCCEEEEEeCCCCCCccccc---cccccc
Confidence 3688899999999999 57899999999877655421 1 1113556789999999999999997542 345789
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHH
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (348)
+++++++..++++++.++++++||||||.+++.+|.++|++++++|++++............... .........
T Consensus 77 ~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~-----~~~~~~~~~- 150 (271)
T d1uk8a_ 77 DSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVW-----GYTPSIENM- 150 (271)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHH-----TCCSCHHHH-
T ss_pred cccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhh-----hccchhHHH-
Confidence 99999999999999999999999999999999999999999999999998776433222111000 000000000
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHh---------hhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCC
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLD---------ERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 253 (348)
......+....... ............. ..........+... ....+.+.++++|+++|+|++|
T Consensus 151 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~P~lii~G~~D 222 (271)
T d1uk8a_ 151 RNLLDIFAYDRSLV-----TDELARLRYEASIQPGFQESFSSMFPEPRQRWIDAL---ASSDEDIKTLPNETLIIHGRED 222 (271)
T ss_dssp HHHHHHHCSCGGGC-----CHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHH---CCCHHHHTTCCSCEEEEEETTC
T ss_pred HHHHHHHhhhcccc-----hhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhc---cccHHHHHhhccceeEEecCCC
Confidence 11111111111100 1222211111110 00001111111221 2334567889999999999999
Q ss_pred CCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 254 PFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 254 ~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.++ .....+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 223 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 223 QVVPLSSSLRLGELIDR--AQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp SSSCHHHHHHHHHHCTT--EEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHhCCC--CEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 998 345568888887 8999999999999999999999999999986
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=7.3e-36 Score=252.89 Aligned_cols=271 Identities=12% Similarity=0.118 Sum_probs=176.4
Q ss_pred CCCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~ 97 (348)
.+.+.+.++++|.+++|...| ++|+|||+||+++++..|... ...+.++|+|+++|+||||.|+.......
T Consensus 6 ~~~~~~~~~~~~~~l~y~~~G--~gp~vv~lHG~~~~~~~~~~~-------~~~l~~~~~vi~~D~~G~G~s~~~~~~~~ 76 (293)
T d1ehya_ 6 EDFKHYEVQLPDVKIHYVREG--AGPTLLLLHGWPGFWWEWSKV-------IGPLAEHYDVIVPDLRGFGDSEKPDLNDL 76 (293)
T ss_dssp GGSCEEEEECSSCEEEEEEEE--CSSEEEEECCSSCCGGGGHHH-------HHHHHTTSEEEEECCTTSTTSCCCCTTCG
T ss_pred CCCcceEEEECCEEEEEEEEC--CCCeEEEECCCCCCHHHHHHH-------HHHHhcCCEEEEecCCcccCCcccccccc
Confidence 345667899999999999999 689999999999988765322 35567799999999999999986544444
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH----------H
Q 018947 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK----------V 167 (348)
Q Consensus 98 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----------~ 167 (348)
..++++++++|+.+++++++.++++++||||||.+++.+|.++|+++.++|++++.............. .
T Consensus 77 ~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (293)
T d1ehya_ 77 SKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQ 156 (293)
T ss_dssp GGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTT
T ss_pred ccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhc
Confidence 568899999999999999999999999999999999999999999999999999865432111000000 0
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhh-chhhHHHHHHHHcC-Ccc--HHhhhccCCc
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDER-QSSNVWHFLEAING-RPD--ISEGLRKLQC 243 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~--~~~~l~~i~~ 243 (348)
........+.........+..++........ ....+....+....... ........+..... ... .......+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T d1ehya_ 157 LDMAVEVVGSSREVCKKYFKHFFDHWSYRDE-LLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDL 235 (293)
T ss_dssp CHHHHHHHTSCHHHHHHHHHHHHHHTSSSSC-CSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCS
T ss_pred cchhhhhhccchhHHHHHHHHhhhhcccccc-cccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCC
Confidence 0000000111111112222222221111110 00233333333222211 11122222222211 111 1112346789
Q ss_pred cEEEEecCCCCCCc--hHHH-HHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 244 RSLIFVGESSPFHS--EAVH-MTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 244 Pvl~i~g~~D~~~~--~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
|+++|+|++|.+++ ...+ +.+..++ .++++++++||++++|+|+++++.|.+||+
T Consensus 236 Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 236 PVTMIWGLGDTCVPYAPLIEFVPKYYSN--YTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp CEEEEEECCSSCCTTHHHHHHHHHHBSS--EEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred ceEEEEeCCCCCcCHHHHHHHHHHhCCC--CEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 99999999999883 2333 4555565 999999999999999999999999999984
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=2e-35 Score=247.91 Aligned_cols=261 Identities=12% Similarity=0.136 Sum_probs=175.4
Q ss_pred eeec-CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 24 LIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 24 ~v~~-~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
++++ +|.+++|..+|++++|+|||+||++++...|.. .+..++++||+|+++|+||||.|..+ ...+++
T Consensus 2 ~i~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~~~~~------~~~~l~~~g~~vi~~D~~G~G~s~~~----~~~~~~ 71 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDN------QMLFFLSHGYRVIAHDRRGHGRSDQP----STGHDM 71 (275)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHH------HHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSH
T ss_pred EEEecCCCEEEEEEecCCCCCeEEEECCCCCCHHHHHH------HHHHHHhCCCEEEEEecccccccccc----cccccc
Confidence 3555 667999999999899999999999999876532 33567789999999999999998754 245899
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeCh-hHHHHHHHHHhCCCCcceEEEecCCCCCCCh--------HHHHHHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTA-GAYILTLFAMKYRHRVLGLILVSPLCKAPSW--------TEWLYNKVMSNLLY 173 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~-Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--------~~~~~~~~~~~~~~ 173 (348)
+++++|+.+++++++.++++++|||+ ||.+++.+|.++|++|+++|++++....... ........ .....
T Consensus 72 ~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 150 (275)
T d1a88a_ 72 DTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEF-RAALA 150 (275)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHH-HHHHH
T ss_pred cccccccccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhh-hhhhh
Confidence 99999999999999999999999997 6667777888999999999999976532211 01110000 00000
Q ss_pred hhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCC
Q 018947 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (348)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 253 (348)
..............++... ...........+....................+. ..+..+.+.++++|+++++|++|
T Consensus 151 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~l~i~G~~D 226 (275)
T d1a88a_ 151 -ANRAQFYIDVPSGPFYGFN--REGATVSQGLIDHWWLQGMMGAANAHYECIAAFS-ETDFTDDLKRIDVPVLVAHGTDD 226 (275)
T ss_dssp -HCHHHHHHHHHHTTTTTTT--STTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHH-HCCCHHHHHHCCSCEEEEEETTC
T ss_pred -hhhHHHHHhhhhhhhhhcc--cchhhHHHHHHHHHHHhhcccchHHHHHHHHHhh-hhhhhHHHHhhccccceeecCCC
Confidence 0000111011111111111 1111112333333322222222223333333322 24566778899999999999999
Q ss_pred CCCc---hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 254 PFHS---EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 254 ~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.+++ ....+.+.+++ +++++++++||++++|+|+++++.|.+||+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 227 QVVPYADAAPKSAELLAN--ATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp SSSCSTTTHHHHHHHSTT--EEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 9883 23456667776 8999999999999999999999999999973
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=7.6e-35 Score=244.29 Aligned_cols=258 Identities=14% Similarity=0.121 Sum_probs=174.1
Q ss_pred eeec-CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 24 LIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 24 ~v~~-~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
++++ +|.+++|...| ++|+|||+||+++++..|. ..+..+.++||+|+++|+||||.|+.+ ...++.
T Consensus 2 ~~~t~dG~~l~y~~~G--~g~~ivlvHG~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~ 69 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWG--QGRPVVFIHGWPLNGDAWQ------DQLKAVVDAGYRGIAHDRRGHGHSTPV----WDGYDF 69 (274)
T ss_dssp EEECTTSCEEEEEEEC--SSSEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSH
T ss_pred eEECcCCCEEEEEEEC--CCCeEEEECCCCCCHHHHH------HHHHHHHHCCCEEEEEeCCCCcccccc----cccccc
Confidence 5677 45699999999 5789999999999987653 233566778999999999999999754 345899
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh-CCCCcceEEEecCCCCCCC--------hHHHHHHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLY 173 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~ 173 (348)
.++++|+.+++++++.++++++||||||.+++.++++ .|++|++++++++...... ...... ........
T Consensus 70 ~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 148 (274)
T d1a8qa_ 70 DTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVF-DALKNGVL 148 (274)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH-HHHHHHHH
T ss_pred hhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHH-HHHHhhhh
Confidence 9999999999999999999999999999999987665 5899999999997653211 111110 00000000
Q ss_pred hhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCC
Q 018947 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (348)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 253 (348)
. ............++........ ........+..................+. ..+..+.+.++++|+++|+|++|
T Consensus 149 ~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~Pvlii~G~~D 223 (274)
T d1a8qa_ 149 T--ERSQFWKDTAEGFFSANRPGNK--VTQGNKDAFWYMAMAQTIEGGVRCVDAFG-YTDFTEDLKKFDIPTLVVHGDDD 223 (274)
T ss_dssp H--HHHHHHHHHHHHHTTTTSTTCC--CCHHHHHHHHHHHTTSCHHHHHHHHHHHH-HCCCHHHHTTCCSCEEEEEETTC
T ss_pred h--hhHHHhhhhhhhhhhccccchh--hhhhHHHHHHHhhhccchhhhhhHHHHhh-ccchHHHHHhccceeeeeccCCC
Confidence 0 0000112222333332221111 02222233322222222223333333332 24566778899999999999999
Q ss_pred CCCc--h-HHHHHHhhccCCcEEEEecCCCCCccc--cChhhhHHHHHHHHhh
Q 018947 254 PFHS--E-AVHMTSKIDRRYSALVEVQACGSMVTE--EQPHAMLIPMEYFLMG 301 (348)
Q Consensus 254 ~~~~--~-~~~~~~~~~~~~~~~~~~~~~gH~~~~--e~p~~~~~~i~~fl~~ 301 (348)
.+++ . .+.+.+.+++ +++++++++||++++ ++|++|++.|.+||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 224 QVVPIDATGRKSAQIIPN--AELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp SSSCGGGTHHHHHHHSTT--CEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHhCCC--CEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 9883 2 3456677777 899999999999887 6799999999999975
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=9.3e-35 Score=244.39 Aligned_cols=253 Identities=14% Similarity=0.110 Sum_probs=165.6
Q ss_pred eeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018947 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (348)
Q Consensus 31 ~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~ 110 (348)
+|+|...| ++|+|||+||++.++..|.. .+..++++||+|+++|+||||.|+.+ ...++++++++|+.
T Consensus 14 ~i~y~~~G--~g~~illlHG~~~~~~~~~~------~~~~l~~~~~~vi~~D~~G~G~S~~~----~~~~~~~~~~~di~ 81 (279)
T d1hkha_ 14 ELYYEDQG--SGQPVVLIHGYPLDGHSWER------QTRELLAQGYRVITYDRRGFGGSSKV----NTGYDYDTFAADLH 81 (279)
T ss_dssp EEEEEEES--SSEEEEEECCTTCCGGGGHH------HHHHHHHTTEEEEEECCTTSTTSCCC----SSCCSHHHHHHHHH
T ss_pred EEEEEEEc--cCCeEEEECCCCCCHHHHHH------HHHHHHHCCCEEEEEechhhCCcccc----ccccchhhhhhhhh
Confidence 88999999 57899999999999876542 33567789999999999999999754 24589999999999
Q ss_pred HHHHHcCCCceeEEEeChhH-HHHHHHHHhCCCCcceEEEecCCCCCCC--------hHHHHHHHHHHHHHHhhccchhH
Q 018947 111 EVLNHFGLGAVMCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLYYYGMCGVV 181 (348)
Q Consensus 111 ~~l~~l~~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 181 (348)
+++++++.++++++|||||| .++..+|..+|++|.+++++++...... ........ ...... .......
T Consensus 82 ~~i~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~ 159 (279)
T d1hkha_ 82 TVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDG-IEAAAK-GDRFAWF 159 (279)
T ss_dssp HHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHH-HHHHHH-HCHHHHH
T ss_pred hhhhhcCcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHH-HHHhhh-hhhhhhh
Confidence 99999999999999999996 5666677788999999999987653211 01111000 000000 0000011
Q ss_pred HHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchh-hHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc---
Q 018947 182 KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSS-NVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--- 257 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--- 257 (348)
......+........ ..................... .+...........+..+.+..+++|+++++|++|.+++
T Consensus 160 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~ 237 (279)
T d1hkha_ 160 -TDFYKNFYNLDENLG-SRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDA 237 (279)
T ss_dssp -HHHHHHHHTHHHHBT-TTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTT
T ss_pred -hhhhhhhcccchhhh-hhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHH
Confidence 111111111100000 000222222222222222211 12211222222223345567789999999999999873
Q ss_pred hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 258 EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
..+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 238 ~~~~~~~~~p~--~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 238 TARRFHQAVPE--ADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp THHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 34567777777 8999999999999999999999999999975
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-35 Score=254.15 Aligned_cols=273 Identities=13% Similarity=0.156 Sum_probs=176.5
Q ss_pred CCCccceeec-CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKT-SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 18 ~~~~~~~v~~-~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
.+.+..++++ +|.+++|...| ++|+|||+||+++++..|.. .+..+..+||+||++|+||||.|..+ ..
T Consensus 9 ~~~~~~~v~~~~g~~i~y~~~G--~gp~vlllHG~~~~~~~~~~------~~~~L~~~g~~vi~~D~~G~G~S~~~--~~ 78 (322)
T d1zd3a2 9 SDMSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYSWRY------QIPALAQAGYRVLAMDMKGYGESSAP--PE 78 (322)
T ss_dssp GGSEEEEEEEETTEEEEEEEEC--CSSEEEEECCTTCCGGGGTT------HHHHHHHTTCEEEEEECTTSTTSCCC--SC
T ss_pred CCCceeEEEECCCCEEEEEEEc--CCCeEEEECCCCCCHHHHHH------HHHHHHHCCCEEEEeccccccccccc--cc
Confidence 3556778888 56689999999 67999999999999876543 23566678999999999999999865 22
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH----HHHHHHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT----EWLYNKVMSNLL 172 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~ 172 (348)
...++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++........ ............
T Consensus 79 ~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (322)
T d1zd3a2 79 IEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQ 158 (322)
T ss_dssp GGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHH
T ss_pred cccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhH
Confidence 4568999999999999999999999999999999999999999999999999998765432111 000000000000
Q ss_pred HhhccchhH---H----HHHHHhhhcccc----------------------cCCCCCCChHHHHHHHHHHhhhchhhHHH
Q 018947 173 YYYGMCGVV---K----ELLLKRYFSKEV----------------------RGNAQVPESDIVQACRRLLDERQSSNVWH 223 (348)
Q Consensus 173 ~~~~~~~~~---~----~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (348)
......... . ...+..++.... ..............+...+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (322)
T d1zd3a2 159 LYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLN 238 (322)
T ss_dssp HHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHH
T ss_pred HhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccccccc
Confidence 000000000 0 001111110000 00000001222222222222111111111
Q ss_pred HHHHHc--CCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHH
Q 018947 224 FLEAIN--GRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFL 299 (348)
Q Consensus 224 ~~~~~~--~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 299 (348)
.+..+. ...+......++++|+++|+|++|.++ ...+.+.+.+++ .++++++++||++++|+|++|++.|.+||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~v~~~i~~FL 316 (322)
T d1zd3a2 239 WYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH--LKRGHIEDCGHWTQMDKPTEVNQILIKWL 316 (322)
T ss_dssp TTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred cccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 000000 001222345788999999999999988 344457777776 99999999999999999999999999999
Q ss_pred hhc
Q 018947 300 MGY 302 (348)
Q Consensus 300 ~~~ 302 (348)
++.
T Consensus 317 ~~~ 319 (322)
T d1zd3a2 317 DSD 319 (322)
T ss_dssp HHH
T ss_pred hhc
Confidence 876
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=6.6e-34 Score=238.24 Aligned_cols=258 Identities=14% Similarity=0.165 Sum_probs=170.6
Q ss_pred eeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHH
Q 018947 24 LIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVD 103 (348)
Q Consensus 24 ~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 103 (348)
+...+|.+++|...| ++|+|||+||++++...|.. .+..+.++||+|+++|+||||.|+.+ ...++++
T Consensus 3 f~~~dG~~i~y~~~G--~g~pvvllHG~~~~~~~~~~------~~~~l~~~~~~vi~~D~~G~G~S~~~----~~~~~~~ 70 (273)
T d1a8sa_ 3 FTTRDGTQIYYKDWG--SGQPIVFSHGWPLNADSWES------QMIFLAAQGYRVIAHDRRGHGRSSQP----WSGNDMD 70 (273)
T ss_dssp EECTTSCEEEEEEES--CSSEEEEECCTTCCGGGGHH------HHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHH
T ss_pred EEeeCCcEEEEEEEC--CCCeEEEECCCCCCHHHHHH------HHHHHHhCCCEEEEEechhcCccccc----ccccccc
Confidence 445577799999999 57899999999999876542 23556678999999999999999754 2458999
Q ss_pred HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHH-HHhCCCCcceEEEecCCCCCCC--------hHHHHHHHHHHHHHHh
Q 018947 104 DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLF-AMKYRHRVLGLILVSPLCKAPS--------WTEWLYNKVMSNLLYY 174 (348)
Q Consensus 104 ~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~-a~~~p~~v~~lvl~~~~~~~~~--------~~~~~~~~~~~~~~~~ 174 (348)
++++|+.+++++++.++.+++|||+||.+++.+ |..+|++|.+++++++...... ...............
T Consensus 71 ~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 149 (273)
T d1a8sa_ 71 TYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLA- 149 (273)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHH-
T ss_pred chHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHH-
Confidence 999999999999999999999999988665555 5567999999999987654211 001100000000000
Q ss_pred hccchhHHHHHHHh-hhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCC
Q 018947 175 YGMCGVVKELLLKR-YFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (348)
Q Consensus 175 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 253 (348)
...... ..+... ++..... .........+.+..................+.. .+..+.+.++++|+++|+|++|
T Consensus 150 -~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvlii~g~~D 224 (273)
T d1a8sa_ 150 -DRSQLY-KDLASGPFFGFNQP--GAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSE-TDFTEDLKKIDVPTLVVHGDAD 224 (273)
T ss_dssp -HHHHHH-HHHHHTTSSSTTST--TCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHTCCSCEEEEEETTC
T ss_pred -HHHHHH-HHHhhhhhhhcccc--hhhhhHHHHHHHHHhhcccchhhhhhhHHHhhh-hhhhHHHHhhccceEEEecCCC
Confidence 000111 111111 1111110 001123333333332222233333333333322 4566778899999999999999
Q ss_pred CCCc--hHHHHHHh-hccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 254 PFHS--EAVHMTSK-IDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 254 ~~~~--~~~~~~~~-~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.+++ ....+.+. .++ +++++++++||++++|+|+++++.|.+||++
T Consensus 225 ~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~G 273 (273)
T d1a8sa_ 225 QVVPIEASGIASAALVKG--STLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp SSSCSTTTHHHHHHHSTT--CEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHcCC
Confidence 9883 33444444 455 8999999999999999999999999999974
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=2.1e-34 Score=246.42 Aligned_cols=258 Identities=11% Similarity=0.057 Sum_probs=167.5
Q ss_pred cCCceeEEEEccCCC-CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHH
Q 018947 27 TSHGSLSVTIYGDQD-KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (348)
Q Consensus 27 ~~~~~l~~~~~g~~~-~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (348)
.+|.+++|...|+++ .|+|||+||+++++..|.... ..+...||+|+++|+||||.|..+ .....++++++
T Consensus 31 ~~g~~~~y~~~G~~~~~p~llllHG~~~~~~~~~~~~------~~l~~~~~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~ 102 (310)
T d1b6ga_ 31 YPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMI------PVFAESGARVIAPDFFGFGKSDKP--VDEEDYTFEFH 102 (310)
T ss_dssp CTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTH------HHHHHTTCEEEEECCTTSTTSCEE--SCGGGCCHHHH
T ss_pred CCCEEEEEEEecCCCCCCEEEEECCCCCchHHHHHHH------HHhhccCceEEEeeecCccccccc--ccccccccccc
Confidence 477899999999764 578899999999987764333 566778999999999999999865 22456899999
Q ss_pred HHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH--HHHH--H----HHHHHHHhhcc
Q 018947 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE--WLYN--K----VMSNLLYYYGM 177 (348)
Q Consensus 106 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~--~----~~~~~~~~~~~ 177 (348)
++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++......... .... . ...........
T Consensus 103 ~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (310)
T d1b6ga_ 103 RNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTP 182 (310)
T ss_dssp HHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSC
T ss_pred ccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhhhhhhhccc
Confidence 99999999999999999999999999999999999999999999998765332111 0000 0 00000000000
Q ss_pred chhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhc-hhhHHHHHHHHcCC---------ccHHhhhccCCccEEE
Q 018947 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQ-SSNVWHFLEAINGR---------PDISEGLRKLQCRSLI 247 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~l~~i~~Pvl~ 247 (348)
.......+...+. +.. .......+...+.... ......+....... .........+++|+++
T Consensus 183 ~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 254 (310)
T d1b6ga_ 183 SDLRLDQFMKRWA-PTL-------TEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFM 254 (310)
T ss_dssp SSCCHHHHHHHHS-TTC-------CHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred hhhhhhhhhhccC-ccc-------cHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEE
Confidence 0000011111111 000 1111111111111000 00011110100000 1112234678999999
Q ss_pred EecCCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 248 FVGESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 248 i~g~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++|++|.++ .....+.+.+++ ..++++++++||+++.++|+.+++.|.+||++
T Consensus 255 i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 255 AIGMKDKLLGPDVMYPMKALING-CPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp EEETTCSSSSHHHHHHHHHHSTT-CCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCHHHHHHHHHhcCC-CccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 999999988 344557777765 23678899999999999999999999999985
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=3.9e-34 Score=240.16 Aligned_cols=252 Identities=12% Similarity=0.114 Sum_probs=165.1
Q ss_pred CceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018947 29 HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (348)
Q Consensus 29 ~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d 108 (348)
+.+|+|...| ++|+|||+||++++...|. ..+..+.++||+|+++|+||||.|+.. ...++++++++|
T Consensus 12 ~v~i~y~~~G--~G~~ivllHG~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~~~~~~d 79 (277)
T d1brta_ 12 SIDLYYEDHG--TGQPVVLIHGFPLSGHSWE------RQSAALLDAGYRVITYDRRGFGQSSQP----TTGYDYDTFAAD 79 (277)
T ss_dssp EEEEEEEEEC--SSSEEEEECCTTCCGGGGH------HHHHHHHHTTCEEEEECCTTSTTSCCC----SSCCSHHHHHHH
T ss_pred cEEEEEEEEc--cCCeEEEECCCCCCHHHHH------HHHHHHHhCCCEEEEEeCCCCCccccc----ccccchhhhhhh
Confidence 3478899999 6889999999999987653 233566778999999999999999743 345899999999
Q ss_pred HHHHHHHcCCCceeEEEeChhH-HHHHHHHHhCCCCcceEEEecCCCCCCCh---------HHHHHHHHHHHHHHhhccc
Q 018947 109 IAEVLNHFGLGAVMCMGVTAGA-YILTLFAMKYRHRVLGLILVSPLCKAPSW---------TEWLYNKVMSNLLYYYGMC 178 (348)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 178 (348)
+.+++++++.++++++|||||| .++..+|..+|++|+++|++++....... ..... ......... ...
T Consensus 80 l~~~l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~ 157 (277)
T d1brta_ 80 LNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFF-DGIVAAVKA-DRY 157 (277)
T ss_dssp HHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHH-HHHHHHHHH-CHH
T ss_pred hhhhhhccCcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHH-HHHHHhhhc-cch
Confidence 9999999999999999999996 55666777889999999999876532110 01110 011000000 000
Q ss_pred hhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHH-HHHcCCccHHhhhccCCccEEEEecCCCCCCc
Q 018947 179 GVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFL-EAINGRPDISEGLRKLQCRSLIFVGESSPFHS 257 (348)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~ 257 (348)
... ......++........ .............. ......... .......+....+.++++|+++++|++|.+++
T Consensus 158 ~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~ 232 (277)
T d1brta_ 158 AFY-TGFFNDFYNLDENLGT-RISEEAVRNSWNTA---ASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLP 232 (277)
T ss_dssp HHH-HHHHHHHTTHHHHBTT-TBCHHHHHHHHHHH---HHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSC
T ss_pred hhh-hhccccccccchhhhh-hhhHHHhhhhhccc---chhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcC
Confidence 111 1111212111110000 00111111111111 111111111 11122245566788999999999999999883
Q ss_pred --h-HHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 258 --E-AVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 258 --~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
. .+.+.+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 233 ~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 233 IENTARVFHKALPS--AEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp GGGTHHHHHHHCTT--SEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 2 3446677776 9999999999999999999999999999975
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.3e-33 Score=235.85 Aligned_cols=258 Identities=12% Similarity=0.117 Sum_probs=172.6
Q ss_pred ceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
++++.+|.+++|..+| ++|+|||+||++++...|.. .+..+.++||+|+++|+||||.|+.+ ...+++
T Consensus 2 ~f~~~dG~~l~y~~~G--~g~~vv~lHG~~~~~~~~~~------~~~~l~~~g~~vi~~D~~G~G~S~~~----~~~~~~ 69 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDWG--SGKPVLFSHGWLLDADMWEY------QMEYLSSRGYRTIAFDRRGFGRSDQP----WTGNDY 69 (271)
T ss_dssp EEECTTSCEEEEEEES--SSSEEEEECCTTCCGGGGHH------HHHHHHTTTCEEEEECCTTSTTSCCC----SSCCSH
T ss_pred EEEeECCeEEEEEEEc--CCCeEEEECCCCCCHHHHHH------HHHHHHhCCCEEEEEecccccccccc----cccccc
Confidence 4778899999999999 56889999999998876532 23456677999999999999999754 345799
Q ss_pred HHHHHHHHHHHHHcCCCceeEEEeChhHHHHH-HHHHhCCCCcceEEEecCCCCCCCh--------HHHHHHHHHHHHHH
Q 018947 103 DDLADQIAEVLNHFGLGAVMCMGVTAGAYILT-LFAMKYRHRVLGLILVSPLCKAPSW--------TEWLYNKVMSNLLY 173 (348)
Q Consensus 103 ~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~-~~a~~~p~~v~~lvl~~~~~~~~~~--------~~~~~~~~~~~~~~ 173 (348)
+++++++.+++++++.++++++|||+||.+++ .+|..+|++|.+++++++....... ..............
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T d1va4a_ 70 DTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLK 149 (271)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred ccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhh
Confidence 99999999999999999999999999987655 4566789999999999876543210 00000000000000
Q ss_pred hhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCC
Q 018947 174 YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESS 253 (348)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 253 (348)
. ..... ......++....... ........................+..+.. .+....+.++++|+++++|++|
T Consensus 150 ~--~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvl~i~g~~D 222 (271)
T d1va4a_ 150 D--RAQFI-SDFNAPFYGINKGQV---VSQGVQTQTLQIALLASLKATVDCVTAFAE-TDFRPDMAKIDVPTLVIHGDGD 222 (271)
T ss_dssp H--HHHHH-HHHHHHHHTGGGTCC---CCHHHHHHHHHHHHHSCHHHHHHHHHHHHH-CCCHHHHHHCCSCEEEEEETTC
T ss_pred h--hhhhh-hhhcchhhcccchhh---hhhhHHHHHHhhhhhhhhhhhhhcccccch-hhhhhhhhhcccceeecccCCC
Confidence 0 00011 111111211111110 022222222222222233333333333222 4556678899999999999999
Q ss_pred CCCc--hHHHH-HHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 254 PFHS--EAVHM-TSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 254 ~~~~--~~~~~-~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
.+++ ...++ .+.+++ +++++++++||++++|+|+++++.|.+||++
T Consensus 223 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 223 QIVPFETTGKVAAELIKG--AELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp SSSCGGGTHHHHHHHSTT--CEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHhCCC--CEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 9883 33444 445565 8999999999999999999999999999975
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=2.1e-33 Score=240.74 Aligned_cols=130 Identities=14% Similarity=0.068 Sum_probs=112.0
Q ss_pred CCccceeecCC-ceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC
Q 018947 19 SGKDNLIKTSH-GSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE 97 (348)
Q Consensus 19 ~~~~~~v~~~~-~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~ 97 (348)
+.+++++++++ .+++|..+|++++|+|||+||+++++..|... ...+.++|+||++|+||||.|+.+ ...
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~~~~~~~~-------~~~l~~~~~Vi~~D~rG~G~S~~~--~~~ 80 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMR-------RFHDPAKYRIVLFDQRGSGRSTPH--ADL 80 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCCGGGG-------GGSCTTTEEEEEECCTTSTTSBST--TCC
T ss_pred CCCCCEEEeCCCcEEEEEEecCCCCCEEEEECCCCCCccchHHH-------hHHhhcCCEEEEEeccccCCCCcc--ccc
Confidence 34777888855 48999999999999999999998877655422 355678999999999999999865 234
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 98 PVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 98 ~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
..++++++++|+.++++++++++++|+||||||.+++.+|.++|++|++++++++.....
T Consensus 81 ~~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~ 140 (313)
T d1azwa_ 81 VDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRR 140 (313)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCH
T ss_pred cchhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccc
Confidence 568999999999999999999999999999999999999999999999999999877653
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-35 Score=236.13 Aligned_cols=202 Identities=13% Similarity=0.180 Sum_probs=162.5
Q ss_pred CCCccceeecCCceeEEEEccC---CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 18 PSGKDNLIKTSHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 18 ~~~~~~~v~~~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
++.++.+++.+|.+++|...++ +.+++|||+||++++...|... ..+..+.++||+|+++|+||||.|+.+..
T Consensus 4 ~~~~e~~i~v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~----~~~~~la~~gy~via~D~~G~G~S~~~~~ 79 (208)
T d1imja_ 4 VEQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNL----GTLHRLAQAGYRAVAIDLPGLGHSKEAAA 79 (208)
T ss_dssp EEECCCCEEETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHH----THHHHHHHTTCEEEEECCTTSGGGTTSCC
T ss_pred CCceEEEEEECCEEEEEEEecCCCCCCCCeEEEECCCCCChhHHhhh----HHHHHHHHcCCeEEEeecccccCCCCCCc
Confidence 3456778999999999988764 4567999999999998776421 12246778899999999999999976522
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 95 DDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
...++..+.++++.++++.++.++++++||||||.+++.+|.++|++++++|+++|.....
T Consensus 80 --~~~~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~----------------- 140 (208)
T d1imja_ 80 --PAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK----------------- 140 (208)
T ss_dssp --SSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG-----------------
T ss_pred --ccccchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccccc-----------------
Confidence 2334556667788899999999999999999999999999999999999999998742100
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
...+.+.++++|+|+|+|++|.
T Consensus 141 ----------------------------------------------------------~~~~~~~~i~~P~Lii~G~~D~ 162 (208)
T d1imja_ 141 ----------------------------------------------------------INAANYASVKTPALIVYGDQDP 162 (208)
T ss_dssp ----------------------------------------------------------SCHHHHHTCCSCEEEEEETTCH
T ss_pred ----------------------------------------------------------cccccccccccccccccCCcCc
Confidence 0011235678999999999999
Q ss_pred CCchHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 255 FHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+++...+..+.+++ .++++++++||..++++|+++.+.+.+||+++
T Consensus 163 ~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~L 208 (208)
T d1imja_ 163 MGQTSFEHLKQLPN--HRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 208 (208)
T ss_dssp HHHHHHHHHTTSSS--EEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHhCCC--CeEEEECCCCCchhhhCHHHHHHHHHHHHhcC
Confidence 87655566667776 89999999999999999999999999999874
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-34 Score=240.69 Aligned_cols=243 Identities=14% Similarity=0.088 Sum_probs=158.0
Q ss_pred eEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 018947 32 LSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAE 111 (348)
Q Consensus 32 l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~ 111 (348)
|+|...|+ ++++|||+||++++...|... ...+.++|+|+++|+||||.|+.. ...++.+++ +
T Consensus 2 i~y~~~G~-g~~~lvllHG~~~~~~~~~~~-------~~~L~~~~~vi~~D~~G~G~S~~~-----~~~~~~d~~----~ 64 (256)
T d1m33a_ 2 IWWQTKGQ-GNVHLVLLHGWGLNAEVWRCI-------DEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMA----E 64 (256)
T ss_dssp CCEEEECC-CSSEEEEECCTTCCGGGGGGT-------HHHHHTTSEEEEECCTTSTTCCSC-----CCCCHHHHH----H
T ss_pred eEEEEECC-CCCeEEEECCCCCCHHHHHHH-------HHHHhCCCEEEEEeCCCCCCcccc-----ccccccccc----c
Confidence 67888893 457899999999988665322 355678999999999999999743 235555544 3
Q ss_pred HHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh------HHHHHHHHHHHHHHhhccchhHHHHH
Q 018947 112 VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW------TEWLYNKVMSNLLYYYGMCGVVKELL 185 (348)
Q Consensus 112 ~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (348)
.+..+..++++++||||||.+++.+|.++|+++++++++++....... ..... ......+. ... ...
T Consensus 65 ~~~~~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~-~~~ 137 (256)
T d1m33a_ 65 AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVL-AGFQQQLS-----DDQ-QRT 137 (256)
T ss_dssp HHHTTSCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHH-HHHHHHHH-----HHH-HHH
T ss_pred ccccccccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHH-HHHHhhhh-----hhh-HHH
Confidence 444556789999999999999999999999999999999876543211 11110 11101000 000 111
Q ss_pred HHhhhcccccCCCCCCChHHHHHHHHHHhhhc---hhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHH
Q 018947 186 LKRYFSKEVRGNAQVPESDIVQACRRLLDERQ---SSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAV 260 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~ 260 (348)
..+++........ ................. ...+...+..+.. .+..+.++++++|+++|+|++|.+++ ...
T Consensus 138 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~ 214 (256)
T d1m33a_ 138 VERFLALQTMGTE--TARQDARALKKTVLALPMPEVDVLNGGLEILKT-VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP 214 (256)
T ss_dssp HHHHHHTTSTTST--THHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH-CCCTTGGGGCCSCEEEEEETTCSSSCGGGCC
T ss_pred HHHHhhhhhcccc--chhhHHHHHHHhhhhcchhhHHHHHhhhhhhcc-cchHHHHHhccCCccccccccCCCCCHHHHH
Confidence 2222211111100 01122222222222211 1222222333222 45567788999999999999999883 445
Q ss_pred HHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 261 HMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
.+.+.+++ +++++++++||++++|+|++|++.|.+||+++|
T Consensus 215 ~l~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ig 255 (256)
T d1m33a_ 215 MLDKLWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQRVG 255 (256)
T ss_dssp -CTTTCTT--CEEEEETTCCSCHHHHSHHHHHHHHHHHHTTSC
T ss_pred HHHHHCCC--CEEEEECCCCCchHHHCHHHHHHHHHHHHHHcC
Confidence 67777776 899999999999999999999999999999986
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=2.1e-33 Score=237.51 Aligned_cols=268 Identities=10% Similarity=0.031 Sum_probs=170.9
Q ss_pred cCCCCCCCccceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC
Q 018947 13 METPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (348)
Q Consensus 13 ~~~~~~~~~~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 92 (348)
|+..++. +.++++++|.+++|...| ++|+|||+||++++...|... ...++++|+||++|+||||.|+.+
T Consensus 2 ~~~~p~~-~~~fi~~~g~~i~y~~~G--~g~~vvllHG~~~~~~~~~~~-------~~~L~~~~~vi~~Dl~G~G~S~~~ 71 (298)
T d1mj5a_ 2 LGAKPFG-EKKFIEIKGRRMAYIDEG--TGDPILFQHGNPTSSYLWRNI-------MPHCAGLGRLIACDLIGMGDSDKL 71 (298)
T ss_dssp CCSSCSS-CCEEEEETTEEEEEEEES--CSSEEEEECCTTCCGGGGTTT-------GGGGTTSSEEEEECCTTSTTSCCC
T ss_pred CCCcCCC-CCEEEEECCEEEEEEEEc--CCCcEEEECCCCCCHHHHHHH-------HHHHhcCCEEEEEeCCCCCCCCCC
Confidence 3455553 456899999999999999 578999999999998776433 356778999999999999999876
Q ss_pred CCCCCCCCCHHHHHHHHHHHH-HHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 93 ISDDEPVLSVDDLADQIAEVL-NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 93 ~~~~~~~~~~~~~~~dl~~~l-~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
...........+..+++..++ +..+.++++++||||||.+++.+|.++|++|.+++++++...................
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~ 151 (298)
T d1mj5a_ 72 DPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQ 151 (298)
T ss_dssp SSCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHH
T ss_pred ccccccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhh
Confidence 444444566777777766665 4456689999999999999999999999999999999877654322111000000000
Q ss_pred HH-------hhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchh---------------hHHHHHHHHc
Q 018947 172 LY-------YYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSS---------------NVWHFLEAIN 229 (348)
Q Consensus 172 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 229 (348)
.. ..................... .................. .......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 221 (298)
T d1mj5a_ 152 AFRSQAGEELVLQDNVFVEQVLPGLILRPL-------SEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVA--- 221 (298)
T ss_dssp HHHSTTHHHHHTTTCHHHHTHHHHTSSSCC-------CHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHH---
T ss_pred hhhhhhhhhhhhhhhhhhhhhccccccccc-------hhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhh---
Confidence 00 000000000001111110000 111111111111000000 0000000
Q ss_pred CCccHHhhhccCCccEEEEecCCCCCC-chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 230 GRPDISEGLRKLQCRSLIFVGESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 230 ~~~~~~~~l~~i~~Pvl~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
...+....+..+++|+++++|++|.+. .....+.+.+++ .+++++ ++||++++|+|+++++.|.+||+++.
T Consensus 222 ~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~p~--~~~~~~-~~GH~~~~e~P~~v~~~i~~fl~~~~ 293 (298)
T d1mj5a_ 222 IARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPN--QTEITV-AGAHFIQEDSPDEIGAAIAAFVRRLR 293 (298)
T ss_dssp HHHHHHHHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCSS--EEEEEE-EESSCGGGTCHHHHHHHHHHHHHHHS
T ss_pred hhhhhhhhhhhcceeEEEEecCCCCcChHHHHHHHHHCCC--CEEEEe-CCCCchHHhCHHHHHHHHHHHHhhhc
Confidence 002334557788999999999999887 445567777776 666665 58999999999999999999999974
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.98 E-value=1.8e-30 Score=220.62 Aligned_cols=127 Identities=11% Similarity=0.059 Sum_probs=111.6
Q ss_pred ccceeecC-CceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTS-HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 21 ~~~~v~~~-~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
+.+++++. |.+|+|..+|++++|+|||+||+++++..|... ...++++|+||++|+||||.|+.+ .....
T Consensus 12 ~~~~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~w~~~-------~~~l~~~~~vi~~D~rG~G~S~~~--~~~~~ 82 (313)
T d1wm1a_ 12 DSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHR-------QLFDPERYKVLLFDQRGCGRSRPH--ASLDN 82 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCCGGGG-------GGSCTTTEEEEEECCTTSTTCBST--TCCTT
T ss_pred cCCEEEeCCCcEEEEEEecCCCCCeEEEECCCCCcccchHHH-------HHHhhcCCEEEEEeCCCccccccc--ccccc
Confidence 56788884 669999999998899999999999998776432 356788999999999999999865 33456
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 100 LSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
++..++++|+..++++++..+++++|||+||.+++.+|..+|++|++++++++....
T Consensus 83 ~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~ 139 (313)
T d1wm1a_ 83 NTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLR 139 (313)
T ss_dssp CSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred cchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeeccccccc
Confidence 889999999999999999999999999999999999999999999999999887654
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.97 E-value=6e-31 Score=217.22 Aligned_cols=243 Identities=11% Similarity=0.068 Sum_probs=153.3
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-Cc
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL-GA 120 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~ 120 (348)
+++|||+||+++++..|.. .+..+.++||+|+++|+||||.|+.+. ...++++++++++..+++.... .+
T Consensus 2 G~~vvllHG~~~~~~~w~~------~~~~L~~~g~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYK------LKPLLEAAGHKVTALDLAASGTDLRKI---EELRTLYDYTLPLMELMESLSADEK 72 (258)
T ss_dssp CCEEEEECCTTCCGGGGTT------HHHHHHHTTCEEEECCCTTSTTCCCCG---GGCCSHHHHHHHHHHHHHTSCSSSC
T ss_pred CCcEEEECCCCCCHHHHHH------HHHHHHhCCCEEEEecCCCCCCCCCCC---CCCcchHHHHHHHhhhhhccccccc
Confidence 6789999999999876543 234555679999999999999997542 3457899999999999988765 58
Q ss_pred eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCC
Q 018947 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQV 200 (348)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
++++||||||.+++.++.++|++++++|++++................... ............. ............
T Consensus 73 ~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~ 148 (258)
T d1xkla_ 73 VILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNER---TPAENWLDTQFLP-YGSPEEPLTSMF 148 (258)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHT---SCTTTTTTCEEEE-CSCTTSCCEEEE
T ss_pred ccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhh---hhhhhhhhhhhhh-hhhhhhhccccc
Confidence 999999999999999999999999999999987654322111100110000 0000000000000 000000000000
Q ss_pred CChHHHHHHHHHHhhhchhhHHHHHHHHc----------CCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhcc
Q 018947 201 PESDIVQACRRLLDERQSSNVWHFLEAIN----------GRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDR 268 (348)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~ 268 (348)
........ .................. ...+....+..+++|+++|+|++|.++ ...+.+.+.+++
T Consensus 149 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 225 (258)
T d1xkla_ 149 FGPKFLAH---KLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV 225 (258)
T ss_dssp CCHHHHHH---HTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC
T ss_pred ccHHHHHH---HhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHCCC
Confidence 01111100 000000000000000000 001223345678899999999999998 345568888887
Q ss_pred CCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 269 RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 269 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+++++++++||++++|+|+++++.|.+|++++
T Consensus 226 --~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 226 --TEAIEIKGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp --SEEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred --CEEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999875
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.97 E-value=5.2e-30 Score=212.25 Aligned_cols=255 Identities=14% Similarity=0.034 Sum_probs=153.4
Q ss_pred CCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 018947 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLAD 107 (348)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 107 (348)
.++++||...+ +++|+|||+||+++++..|.. .+..+.+.||+|+++|+||||.|..... ........+.
T Consensus 3 ~~~~lh~~~~~-~~~P~ivllHG~~~~~~~~~~------~~~~L~~~g~~vi~~Dl~G~G~s~~~~~---~~~~~~~~~~ 72 (264)
T d1r3da_ 3 LSNQLHFAKPT-ARTPLVVLVHGLLGSGADWQP------VLSHLARTQCAALTLDLPGHGTNPERHC---DNFAEAVEMI 72 (264)
T ss_dssp CCEEEESSCCB-TTBCEEEEECCTTCCGGGGHH------HHHHHTTSSCEEEEECCTTCSSCC----------CHHHHHH
T ss_pred cCCeEEEcCCC-CCCCeEEEeCCCCCCHHHHHH------HHHHHHhCCCEEEEEecccccccccccc---cccchhhhhh
Confidence 35677775554 567899999999999876542 3245556799999999999999875422 2233444444
Q ss_pred HHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC---ChHHHHHHHHHHHHHHhhccchhHHHH
Q 018947 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP---SWTEWLYNKVMSNLLYYYGMCGVVKEL 184 (348)
Q Consensus 108 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (348)
+...+....+.++++++||||||.+++.+|.++|+++.+++++.+..... ........................ ..
T Consensus 73 ~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 151 (264)
T d1r3da_ 73 EQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPI-EH 151 (264)
T ss_dssp HHHHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCH-HH
T ss_pred hhcccccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhh-hh
Confidence 44444555566899999999999999999999999999988876544332 111111111111111000000111 11
Q ss_pred HHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHH--cCCccHHhhhccCCccEEEEecCCCCCCchHHHH
Q 018947 185 LLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAI--NGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHM 262 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~ 262 (348)
....++........ ........................... ....+..+.+..+++|+++++|++|..+ ..+
T Consensus 152 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~---~~~ 225 (264)
T d1r3da_ 152 VLSDWYQQAVFSSL---NHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF---QQL 225 (264)
T ss_dssp HHHHHTTSGGGTTC---CHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH---HHH
T ss_pred hhhhhhhhhhhccc---chHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH---HHH
Confidence 22222222221111 233333333322222222222222221 1223445667889999999999999653 223
Q ss_pred HHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 263 TSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 263 ~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++ .++ +++++++++||++++|+|+++++.|.+||+.+
T Consensus 226 ~~-~~~--~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l 262 (264)
T d1r3da_ 226 AE-SSG--LSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HH-HHC--SEEEEETTCCSCHHHHCHHHHHHHHHHHHHHH
T ss_pred Hh-cCC--CeEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 33 244 89999999999999999999999999999986
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.97 E-value=9.4e-32 Score=222.32 Aligned_cols=238 Identities=8% Similarity=0.026 Sum_probs=149.5
Q ss_pred EEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CCceeE
Q 018947 45 LVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFG-LGAVMC 123 (348)
Q Consensus 45 vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~~~v~l 123 (348)
.||+||+++++..|.. .+..+.++||+|+++|+||||.|+.+. ...++++++++++.+++++++ .+++++
T Consensus 5 ~vliHG~~~~~~~w~~------~~~~L~~~g~~Via~Dl~G~G~S~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~l 75 (256)
T d3c70a1 5 FVLIHTICHGAWIWHK------LKPLLEALGHKVTALDLAASGVDPRQI---EEIGSFDEYSEPLLTFLEALPPGEKVIL 75 (256)
T ss_dssp EEEECCTTCCGGGGTT------HHHHHHHTTCEEEEECCTTSTTCSCCG---GGCCSHHHHTHHHHHHHHHSCTTCCEEE
T ss_pred EEEeCCCCCCHHHHHH------HHHHHHhCCCEEEEEcCCCCCCCCCCC---CCCCCHHHHHHHhhhhhhhhccccceee
Confidence 5899999998876543 224555679999999999999997542 246899999999999988865 678999
Q ss_pred EEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCCh
Q 018947 124 MGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPES 203 (348)
Q Consensus 124 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (348)
+||||||.+++.++.++|++|+++|++++............................. ............. ...
T Consensus 76 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~ 149 (256)
T d3c70a1 76 VGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYF---TYTKDGKEITGLK---LGF 149 (256)
T ss_dssp EEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEE---EEEETTEEEEEEE---CCH
T ss_pred cccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHH---hhhccccccchhh---hhh
Confidence 9999999999999999999999999999765443221111001100000000000000 0000000000000 000
Q ss_pred HHHHHHHHHHhhhchhhHHHHHHH----------HcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCc
Q 018947 204 DIVQACRRLLDERQSSNVWHFLEA----------INGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYS 271 (348)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~ 271 (348)
... .................. .............+++|+++|+|++|..++ ..+.+.+.+++ .
T Consensus 150 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~--~ 224 (256)
T d3c70a1 150 TLL---RENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP--D 224 (256)
T ss_dssp HHH---HHHTSTTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC--S
T ss_pred hhh---hhhhhhhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCCC--C
Confidence 100 000000000000000000 001112223345578999999999999983 45568888887 8
Q ss_pred EEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 272 ALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 272 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
++++++++||++++|+|+++++.|.+|++++
T Consensus 225 ~~~~i~~agH~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 225 KVYKVEGGDHKLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp EEEECCSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999875
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.96 E-value=8.6e-29 Score=218.31 Aligned_cols=267 Identities=9% Similarity=0.007 Sum_probs=168.0
Q ss_pred ceeecCCceeEEEEc--cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCC------eEEEEeCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN------FCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~--g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g------~~vi~~D~~G~G~S~~~~~ 94 (348)
..++++|.+|||... +.+++++|||+||++++...|...+ ..+..+| |+||++|+||||.|+.|.
T Consensus 85 f~~~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi------~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~- 157 (394)
T d1qo7a_ 85 FTTEIEGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPIL------QLFREEYTPETLPFHLVVPSLPGYTFSSGPP- 157 (394)
T ss_dssp EEEEETTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHH------HHHHHHCCTTTCCEEEEEECCTTSTTSCCCC-
T ss_pred eEEEECCEEEEEEEEeccCCCCCEEEEeccccccHHHHHHHH------HhhccccCCcccceeeecccccccCCCCCCC-
Confidence 346679999999754 3467889999999999998875444 4444445 999999999999998763
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh---------HHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW---------TEWLYN 165 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---------~~~~~~ 165 (348)
....+++.++++++..+++.++..+++++|||+||.++..+++.+|+++.++++++........ ......
T Consensus 158 -~~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T d1qo7a_ 158 -LDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGI 236 (394)
T ss_dssp -SSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHH
T ss_pred -CCCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccccccccccccchhhhHHHH
Confidence 2456899999999999999999999999999999999999999999999999998766543210 000000
Q ss_pred HHHHHHHHhhc-------------------cchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHH-HHH
Q 018947 166 KVMSNLLYYYG-------------------MCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVW-HFL 225 (348)
Q Consensus 166 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 225 (348)
........... ............+.... .......++.+............... .+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~ 313 (394)
T d1qo7a_ 237 ARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWV---DKPLPSETILEMVSLYWLTESFPRAIHTYR 313 (394)
T ss_dssp HHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSC---SSCCCHHHHHHHHHHHHHTTCHHHHGGGHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcc---cccCCHHHHHHHHHHHhhccccchhHHHHH
Confidence 00000000000 00000000000000000 00000222333332222211111111 111
Q ss_pred HHHcC-----CccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 226 EAING-----RPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 226 ~~~~~-----~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
..+.. .........+|++|+++++|++|..... +.+.+.+.+ ..++.++++|||++++|+|+++++.|.+||+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p-~~~~~~~~~-~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~ 391 (394)
T d1qo7a_ 314 ETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVP-RSWIATTGN-LVFFRDHAEGGHFAALERPRELKTDLTAFVE 391 (394)
T ss_dssp HHCC---------CTTTTTCEEEEEEEEECTBSSSCCC-HHHHGGGEE-EEEEEECSSCBSCHHHHCHHHHHHHHHHHHH
T ss_pred HHhhcccccchhhhhccCCcccCCeEEEEeCCCccccH-HHHHHhccC-ceEEEEcCCcCCchHHhCHHHHHHHHHHHHH
Confidence 11111 0111223456889999999999976532 345666665 2567789999999999999999999999999
Q ss_pred hc
Q 018947 301 GY 302 (348)
Q Consensus 301 ~~ 302 (348)
++
T Consensus 392 ~v 393 (394)
T d1qo7a_ 392 QV 393 (394)
T ss_dssp HH
T ss_pred Hh
Confidence 75
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.96 E-value=1.2e-28 Score=215.78 Aligned_cols=284 Identities=11% Similarity=0.050 Sum_probs=165.0
Q ss_pred cCCCCCCCccceeecCCc-eeEEE--Ec------cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCC
Q 018947 13 METPPPSGKDNLIKTSHG-SLSVT--IY------GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINP 83 (348)
Q Consensus 13 ~~~~~~~~~~~~v~~~~~-~l~~~--~~------g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 83 (348)
+..+.++.+++.+.|.+| .|..+ .+ +++.+|+|||+||+++++..|.........+..+..+||+|+++|+
T Consensus 20 ~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~ 99 (377)
T d1k8qa_ 20 ITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNS 99 (377)
T ss_dssp HHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCC
T ss_pred HHHcCCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcC
Confidence 344567788899998665 34332 22 2246789999999999998885543222344566789999999999
Q ss_pred CCCCCCCCCCCC-----CCCCCCHH-----HHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCC
Q 018947 84 PGHEFGAAAISD-----DEPVLSVD-----DLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (348)
Q Consensus 84 ~G~G~S~~~~~~-----~~~~~~~~-----~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (348)
||||.|..+... ....++++ |+++++..+++.++.++++++||||||++++.+|.++|+++++++++...
T Consensus 100 rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~ 179 (377)
T d1k8qa_ 100 RGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYAL 179 (377)
T ss_dssp TTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEE
T ss_pred CCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeec
Confidence 999999764221 11234444 45667777888889999999999999999999999999998888876533
Q ss_pred CCCC---C---hHHHH-------HHH-----------HHHHHHH-hhccchhH---HHHHHHhhhcccccCCCCCCChHH
Q 018947 154 CKAP---S---WTEWL-------YNK-----------VMSNLLY-YYGMCGVV---KELLLKRYFSKEVRGNAQVPESDI 205 (348)
Q Consensus 154 ~~~~---~---~~~~~-------~~~-----------~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 205 (348)
.... . ..... ... ....... ........ ................ +...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 255 (377)
T d1k8qa_ 180 APVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNL----NMSR 255 (377)
T ss_dssp SCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGS----CGGG
T ss_pred cccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccc----cHHH
Confidence 2211 0 00000 000 0000000 00000000 0000000000000000 1111
Q ss_pred HHH----------------HHHHHhhh-----chhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHH
Q 018947 206 VQA----------------CRRLLDER-----QSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHM 262 (348)
Q Consensus 206 ~~~----------------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~ 262 (348)
... +.+..... .....................+.++++|+|+|+|++|.++ ...+.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l 335 (377)
T d1k8qa_ 256 LDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLL 335 (377)
T ss_dssp HHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred hhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHH
Confidence 111 11110000 0000111111111112223357889999999999999998 345678
Q ss_pred HHhhccCCcEEEEecCCCCCcc---ccChhhhHHHHHHHHhh
Q 018947 263 TSKIDRRYSALVEVQACGSMVT---EEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 263 ~~~~~~~~~~~~~~~~~gH~~~---~e~p~~~~~~i~~fl~~ 301 (348)
.+.+++ ..+.++++++||+.+ .+.+++|.+.|.+||++
T Consensus 336 ~~~lp~-~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 336 LSKLPN-LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp HTTCTT-EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHHCCC-CeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 888876 247788999999843 36689999999999975
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.96 E-value=6.5e-28 Score=196.81 Aligned_cols=224 Identities=11% Similarity=0.098 Sum_probs=145.2
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHcC
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA---EVLNHFG 117 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~---~~l~~l~ 117 (348)
++++|||+||++++...|. ..+..+.++||+|+++|+||||.|..+. ......+..+++. ..++..+
T Consensus 10 ~~~~vvliHG~~~~~~~~~------~l~~~L~~~G~~v~~~D~~G~G~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 79 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSADVR------MLGRFLESKGYTCHAPIYKGHGVPPEEL----VHTGPDDWWQDVMNGYEFLKNKG 79 (242)
T ss_dssp SSCEEEEECCTTCCTHHHH------HHHHHHHHTTCEEEECCCTTSSSCHHHH----TTCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCCHHHHH------HHHHHHHHCCCEEEEEeCCCCccccccc----cccchhHHHHHHHHHHhhhhhcc
Confidence 5678999999999887653 2335666789999999999999886432 2345555554444 4446677
Q ss_pred CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH--HHHHHHhhccchhHHHHHHHhhhccccc
Q 018947 118 LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV--MSNLLYYYGMCGVVKELLLKRYFSKEVR 195 (348)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
.++++++|||+||.+++.++.++|.+ .++++++............... ..........
T Consensus 80 ~~~~~l~G~S~Gg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 139 (242)
T d1tqha_ 80 YEKIAVAGLSLGGVFSLKLGYTVPIE--GIVTMCAPMYIKSEETMYEGVLEYAREYKKREGK------------------ 139 (242)
T ss_dssp CCCEEEEEETHHHHHHHHHHTTSCCS--CEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTC------------------
T ss_pred cCceEEEEcchHHHHhhhhcccCccc--ccccccccccccchhHHHHHHHHHHHHHhhhccc------------------
Confidence 89999999999999999999998865 4566666665544332221100 0000000000
Q ss_pred CCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHhhccCCcEE
Q 018947 196 GNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSKIDRRYSAL 273 (348)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~~~~~~~~~ 273 (348)
........................... ......+..+++|+|+++|++|..+ ...+.+.+.+.+++.++
T Consensus 140 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~ 210 (242)
T d1tqha_ 140 ------SEEQIEQEMEKFKQTPMKTLKALQELI---ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQI 210 (242)
T ss_dssp ------CHHHHHHHHHHHTTSCCTTHHHHHHHH---HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEE
T ss_pred ------hhhhHHHHHhhhhhhccchhhcccccc---cccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEE
Confidence 011111111111111111111111110 1234457788999999999999988 45667888887767899
Q ss_pred EEecCCCCCcccc-ChhhhHHHHHHHHhhcc
Q 018947 274 VEVQACGSMVTEE-QPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 274 ~~~~~~gH~~~~e-~p~~~~~~i~~fl~~~~ 303 (348)
++++++||+++.+ +++++++.|.+||+++.
T Consensus 211 ~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l~ 241 (242)
T d1tqha_ 211 KWYEQSGHVITLDQEKDQLHEDIYAFLESLD 241 (242)
T ss_dssp EEETTCCSSGGGSTTHHHHHHHHHHHHHHSC
T ss_pred EEECCCCCcCccccCHHHHHHHHHHHHHhCC
Confidence 9999999999986 68999999999999874
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.6e-28 Score=201.92 Aligned_cols=102 Identities=9% Similarity=-0.027 Sum_probs=86.7
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhcc--CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLL--HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~ 119 (348)
++||||+||++++...|.... ..+.+ .+|+|+++|+||||.|..+ ..++++++++++.+++++++ +
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~------~~l~~~~~~~~v~~~d~~G~g~S~~~-----~~~~~~~~~~~l~~~l~~l~-~ 69 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLL------EYINETHPGTVVTVLDLFDGRESLRP-----LWEQVQGFREAVVPIMAKAP-Q 69 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHH------HHHHHHSTTCCEEECCSSCSGGGGSC-----HHHHHHHHHHHHHHHHHHCT-T
T ss_pred CCCEEEECCCCCCHHHHHHHH------HHHHhhCCCeEEEEeCCCCCCCCCCc-----cccCHHHHHHHHHHHHhccC-C
Confidence 567999999999987764222 33332 4899999999999999754 34789999999999999998 9
Q ss_pred ceeEEEeChhHHHHHHHHHhCCC-CcceEEEecCCCC
Q 018947 120 AVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCK 155 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 155 (348)
+++|+||||||.+|+.+|.++|+ +|+++|+++++..
T Consensus 70 ~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 70 GVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred eEEEEccccHHHHHHHHHHHCCccccceEEEECCCCc
Confidence 99999999999999999999998 6999999997654
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.93 E-value=5.8e-25 Score=190.71 Aligned_cols=234 Identities=13% Similarity=0.085 Sum_probs=157.2
Q ss_pred CCCCCccceeecCCceeEEEEcc---CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC
Q 018947 16 PPPSGKDNLIKTSHGSLSVTIYG---DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA 92 (348)
Q Consensus 16 ~~~~~~~~~v~~~~~~l~~~~~g---~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~ 92 (348)
.....++..|..+|.++..+.+- +...|+||++||+.++...+. .....+.++||.|+++|+||||.|...
T Consensus 102 ~~~~~e~v~ip~dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~------~~~~~l~~~G~~vl~~D~~G~G~s~~~ 175 (360)
T d2jbwa1 102 LSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESF------QMENLVLDRGMATATFDGPGQGEMFEY 175 (360)
T ss_dssp SSSCEEEEEEEETTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTH------HHHHHHHHTTCEEEEECCTTSGGGTTT
T ss_pred CCCCeEEeecCcCCcccceEEEecCCCCCceEEEEeCCCCccHHHHH------HHHHHHHhcCCEEEEEccccccccCcc
Confidence 44556777788899999877663 334579999999987765432 233567788999999999999998643
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHc---CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHH
Q 018947 93 ISDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMS 169 (348)
Q Consensus 93 ~~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 169 (348)
.. .....+..+..+.+++... +.++|.++||||||.+++.+|...| +|+++|.+++......+....
T Consensus 176 ~~---~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~~~------ 245 (360)
T d2jbwa1 176 KR---IAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDLET------ 245 (360)
T ss_dssp CC---SCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGGSC------
T ss_pred cc---ccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhhhh------
Confidence 21 2345666777777776554 3468999999999999999999887 699999998876543221100
Q ss_pred HHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEe
Q 018947 170 NLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFV 249 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~ 249 (348)
... ........... ..+ +.. ...... .+....+.+++||+|+++
T Consensus 246 ---------~~~-~~~~~~~~~~~--------~~~--~~~------------~~~~~~----~~~~~~~~~i~~P~Lii~ 289 (360)
T d2jbwa1 246 ---------PLT-KESWKYVSKVD--------TLE--EAR------------LHVHAA----LETRDVLSQIACPTYILH 289 (360)
T ss_dssp ---------HHH-HHHHHHHTTCS--------SHH--HHH------------HHHHHH----TCCTTTGGGCCSCEEEEE
T ss_pred ---------hhh-hHHHHHhccCC--------chH--HHH------------HHHHhh----cchhhhHhhCCCCEEEEE
Confidence 000 00000000000 000 000 000011 123345778999999999
Q ss_pred cCCCCCC-chHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 250 GESSPFH-SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 250 g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
|++|.+. .....+.+.+++.+.+++++++++|.. ...+.+..+.|.+||.+.
T Consensus 290 G~~D~vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~~ 342 (360)
T d2jbwa1 290 GVHDEVPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDV 342 (360)
T ss_dssp ETTSSSCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHH
T ss_pred eCCCCcCHHHHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHHHHHHHHHHHHH
Confidence 9999854 566678888887667888899999954 467778888899999776
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.93 E-value=9.2e-25 Score=185.01 Aligned_cols=230 Identities=10% Similarity=0.056 Sum_probs=139.8
Q ss_pred ccceeecC-CceeEEEEccC-----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC-CCCCCCC
Q 018947 21 KDNLIKTS-HGSLSVTIYGD-----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH-EFGAAAI 93 (348)
Q Consensus 21 ~~~~v~~~-~~~l~~~~~g~-----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~~ 93 (348)
..|.+.++ |..++++.+-+ ..+++||++||++.+...| ...+..+.++||+|+++|+||| |.|+..
T Consensus 5 ~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~------~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~- 77 (302)
T d1thta_ 5 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHF------AGLAEYLSTNGFHVFRYDSLHHVGLSSGS- 77 (302)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGG------HHHHHHHHTTTCCEEEECCCBCC-------
T ss_pred eeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHH------HHHHHHHHHCCCEEEEecCCCCCCCCCCc-
Confidence 45677774 55688776532 3457899999999886543 2344677788999999999998 787633
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHc---CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAEVLNHF---GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (348)
...+++.+..+|+.++++.+ +.++++++||||||.+++.+|.. .+++++|+.++..........
T Consensus 78 ---~~~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~~~-------- 144 (302)
T d1thta_ 78 ---IDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDTLEK-------- 144 (302)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHHHH--------
T ss_pred ---ccCCCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHHHHH--------
Confidence 34578888888888777655 57899999999999999988764 468999998876653211110
Q ss_pred HHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEec
Q 018947 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 250 (348)
.+.. ...... .. .......... .......+............ ....+.+.++++|+|+++|
T Consensus 145 ~~~~-~~~~~~----~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~PvLii~G 205 (302)
T d1thta_ 145 ALGF-DYLSLP----ID-ELPNDLDFEG---HKLGSEVFVRDCFEHHWDTL----------DSTLDKVANTSVPLIAFTA 205 (302)
T ss_dssp HHSS-CGGGSC----GG-GCCSEEEETT---EEEEHHHHHHHHHHTTCSSH----------HHHHHHHTTCCSCEEEEEE
T ss_pred HHhh-ccchhh----hh-hccccccccc---cchhhHHHHHHHHHhHHHHH----------HHHHHHHhhcCCCEEEEEe
Confidence 0000 000000 00 0000000000 00011111111110000000 1233457789999999999
Q ss_pred CCCCCC--chHHHHHHhhccCCcEEEEecCCCCCccccChhh
Q 018947 251 ESSPFH--SEAVHMTSKIDRRYSALVEVQACGSMVTEEQPHA 290 (348)
Q Consensus 251 ~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~ 290 (348)
++|.++ ..+..+.+.++..++++++++++||.+. |+++.
T Consensus 206 ~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~ 246 (302)
T d1thta_ 206 NNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVV 246 (302)
T ss_dssp TTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHH
T ss_pred CCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc-cChHH
Confidence 999999 4566788888877799999999999865 55543
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.91 E-value=1.1e-22 Score=174.29 Aligned_cols=267 Identities=16% Similarity=0.188 Sum_probs=172.3
Q ss_pred ceeEEEEccC---CCCCeEEEeCCCCCChhh--hccccccchhhhhhccCCeEEEEeCCCCCCCCCCC-CC---------
Q 018947 30 GSLSVTIYGD---QDKPALVTYPDLALNYMS--CFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA-IS--------- 94 (348)
Q Consensus 30 ~~l~~~~~g~---~~~p~vvllHG~~~~~~~--~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~-~~--------- 94 (348)
.+|.|.++|. .+.++||++|++.+++.. |+..+.- .-..+-...|.||++|..|.|.+..+ ..
T Consensus 29 ~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG--~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~ 106 (376)
T d2vata1 29 VPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFG--QGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQR 106 (376)
T ss_dssp EEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBS--TTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--C
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCC--CCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCC
Confidence 3789999996 345789999999887753 3322211 11233456899999999998754321 11
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHcCCCce-eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHH
Q 018947 95 ---DDEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (348)
Q Consensus 95 ---~~~~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (348)
...+.+++.|+++.-..++++||++++ .++|.||||+.|+++|..+|++|+++|.+++......+...... ....
T Consensus 107 ~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~-~~~~ 185 (376)
T d2vata1 107 PYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFE-TQRQ 185 (376)
T ss_dssp BCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHH-HHHH
T ss_pred cccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHHH-HHHH
Confidence 123467999999999999999999998 58899999999999999999999999999998877654332211 1111
Q ss_pred HHHh------------------------hccchhHHHHHHHhhhcccccCCCC-----------------------CCCh
Q 018947 171 LLYY------------------------YGMCGVVKELLLKRYFSKEVRGNAQ-----------------------VPES 203 (348)
Q Consensus 171 ~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~ 203 (348)
.+.. ..+..+.....+...|......... ....
T Consensus 186 ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
T d2vata1 186 CIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPI 265 (376)
T ss_dssp HHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CG
T ss_pred HhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccccccccch
Confidence 1100 0000000011112222111000000 0000
Q ss_pred HHHHHHH-----HHHhhhchhhHHHHHHHHcCC-------ccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccC
Q 018947 204 DIVQACR-----RLLDERQSSNVWHFLEAINGR-------PDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRR 269 (348)
Q Consensus 204 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~ 269 (348)
...+.+. +...+.+...+....+.+... .++.+.+++|++|+|+|..+.|.+++ ..+++++.+++
T Consensus 266 ~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~~- 344 (376)
T d2vata1 266 EAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPN- 344 (376)
T ss_dssp GGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTT-
T ss_pred hHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcCC-
Confidence 1112221 122223455555555554321 24566799999999999999999883 55568888887
Q ss_pred CcEEEEec-CCCCCccccChhhhHHHHHHHHhh
Q 018947 270 YSALVEVQ-ACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 270 ~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+++++++ ..||..++.+++.+.+.|++||++
T Consensus 345 -a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 345 -SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp -EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred -CeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 9999998 589988888899999999999975
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.91 E-value=2.7e-22 Score=170.74 Aligned_cols=273 Identities=15% Similarity=0.184 Sum_probs=175.3
Q ss_pred CCceeEEEEccCC---CCCeEEEeCCCCCChhhhcc--ccccchhh----hhhccCCeEEEEeCCCCCCCCCCC-CC---
Q 018947 28 SHGSLSVTIYGDQ---DKPALVTYPDLALNYMSCFQ--GLFFCPEA----CSLLLHNFCIYHINPPGHEFGAAA-IS--- 94 (348)
Q Consensus 28 ~~~~l~~~~~g~~---~~p~vvllHG~~~~~~~~~~--~~~~~~~~----~~~~~~g~~vi~~D~~G~G~S~~~-~~--- 94 (348)
++.++.|.++|.. ..++||++|++.+++..+.. .--||..+ ..+-.+.|.||++|..|.|.+..+ ..
T Consensus 22 ~~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p 101 (357)
T d2b61a1 22 SYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINP 101 (357)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCT
T ss_pred CCceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCC
Confidence 3458999999952 34799999999998765310 00122221 233346799999999998754322 11
Q ss_pred -------CCCCCCCHHHHHHHHHHHHHHcCCCce-eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHH
Q 018947 95 -------DDEPVLSVDDLADQIAEVLNHFGLGAV-MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 95 -------~~~~~~~~~~~~~dl~~~l~~l~~~~v-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (348)
......++.|+++....++++||++++ .++|.||||+.|+++|.+||++|+++|.+++......+.......
T Consensus 102 ~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~~ 181 (357)
T d2b61a1 102 QTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHV 181 (357)
T ss_dssp TTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHH
T ss_pred CCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHHH
Confidence 124568999999999999999999999 577999999999999999999999999999887765543322111
Q ss_pred HHHHHHHh------------------------hccchhHHHHHHHhhhcccccCCCCC-CChHHHHHHHH-----HHhhh
Q 018947 167 VMSNLLYY------------------------YGMCGVVKELLLKRYFSKEVRGNAQV-PESDIVQACRR-----LLDER 216 (348)
Q Consensus 167 ~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~ 216 (348)
....+.. .++..+.....+...|.......... ......+.+.+ ...+.
T Consensus 182 -~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rf 260 (357)
T d2b61a1 182 -MRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERF 260 (357)
T ss_dssp -HHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhC
Confidence 1111110 00000001112222222221111000 01111222222 12223
Q ss_pred chhhHHHHHHHHc------CCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCC--cEEEEecC-CCCCccc
Q 018947 217 QSSNVWHFLEAIN------GRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRY--SALVEVQA-CGSMVTE 285 (348)
Q Consensus 217 ~~~~~~~~~~~~~------~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~-~gH~~~~ 285 (348)
++..+....+.+. .+.++.+.+++|++|+|+|..+.|.+++ ..+++++.+++.+ +++++++. .||..++
T Consensus 261 Dan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL 340 (357)
T d2b61a1 261 DANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFL 340 (357)
T ss_dssp CHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHH
T ss_pred CHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccC
Confidence 5555655555442 2346777899999999999999999984 4456777777533 67888886 5999988
Q ss_pred cChhhhHHHHHHHHhh
Q 018947 286 EQPHAMLIPMEYFLMG 301 (348)
Q Consensus 286 e~p~~~~~~i~~fl~~ 301 (348)
.+.+++.+.|++||..
T Consensus 341 ~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 341 VDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHcc
Confidence 8899999999999975
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.90 E-value=4.7e-23 Score=172.74 Aligned_cols=216 Identities=15% Similarity=0.138 Sum_probs=138.0
Q ss_pred CCCCeEEEeCCCCCChhhh-ccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHcC
Q 018947 40 QDKPALVTYPDLALNYMSC-FQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAE-VLNHFG 117 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~-~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~-~l~~l~ 117 (348)
...|+|||+||+...+..+ |..+ ...+..+++|+++|+||||.|+... ......+++++++++.+ +++..+
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~l------a~~L~~~~~V~al~~pG~~~~~~~~-~~~~~~s~~~~a~~~~~~i~~~~~ 130 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRL------STSFQEERDFLAVPLPGYGTGTGTG-TALLPADLDTALDAQARAILRAAG 130 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHH------HHTTTTTCCEEEECCTTCCBC---C-BCCEESSHHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEeCCCCCCCCHHHHHHH------HHhcCCCceEEEEeCCCCCCCCCCc-cccccCCHHHHHHHHHHHHHHhcC
Confidence 4568999999964333222 3222 5677889999999999999887542 22234689999998765 667788
Q ss_pred CCceeEEEeChhHHHHHHHHHhC----CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccc
Q 018947 118 LGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE 193 (348)
Q Consensus 118 ~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (348)
..+++|+||||||.+|+++|.+. +.+|.++|++++.................. .... ..
T Consensus 131 ~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~-------------~~~~----~~ 193 (283)
T d2h7xa1 131 DAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGE-------------GLFA----GE 193 (283)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHH-------------HHHH----TC
T ss_pred CCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHH-------------Hhhc----cc
Confidence 88999999999999999999864 568999999998776544322211111111 0111 01
Q ss_pred ccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCc
Q 018947 194 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYS 271 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~ 271 (348)
.... ........ ..+.+.+.. .....+++|+++|+|++|..++ ....+.+.++. ..
T Consensus 194 ~~~~----~~~~l~a~------------~~~~~~~~~-----~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~-~~ 251 (283)
T d2h7xa1 194 LEPM----SDARLLAM------------GRYARFLAG-----PRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDL-PH 251 (283)
T ss_dssp SSCC----CHHHHHHH------------HHHHHHHHS-----CCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSS-CS
T ss_pred cccc----ccHHHHHH------------HHHHHHHhh-----ccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCC-Cc
Confidence 0000 11111111 111111111 1135689999999999998872 22334444443 36
Q ss_pred EEEEecCCCCCccc-cChhhhHHHHHHHHhhc
Q 018947 272 ALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 272 ~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 302 (348)
+++.++ ++|+.++ ++++.+++.|.+||+++
T Consensus 252 ~~~~v~-G~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 252 TVADVP-GDHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp EEEEES-SCTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred EEEEEc-CCCcccccCCHHHHHHHHHHHHHhc
Confidence 888887 5898665 78999999999999875
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.90 E-value=5.7e-22 Score=169.00 Aligned_cols=270 Identities=13% Similarity=0.152 Sum_probs=168.4
Q ss_pred CceeEEEEccC---CCCCeEEEeCCCCCChhh------------hccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 29 HGSLSVTIYGD---QDKPALVTYPDLALNYMS------------CFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 29 ~~~l~~~~~g~---~~~p~vvllHG~~~~~~~------------~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
..++.|.++|. .+.++||++|++.+++.. |+..++- .-..+-.+.|.||++|..|.|.|..+.
T Consensus 26 ~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG--~g~~lDt~~yfVI~~n~lG~~~~ss~~ 103 (362)
T d2pl5a1 26 PVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIG--PGKSFDTNQYFIICSNVIGGCKGSSGP 103 (362)
T ss_dssp SEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEE--TTSSEETTTCEEEEECCTTCSSSSSST
T ss_pred CceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcC--CCCccCccccEEEeeccccCcccccCc
Confidence 45789999995 244799999999988532 3222210 112334567999999999988765431
Q ss_pred C-----------CCCCCCCHHHHHHHHHHHHHHcCCCcee-EEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHH
Q 018947 94 S-----------DDEPVLSVDDLADQIAEVLNHFGLGAVM-CMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTE 161 (348)
Q Consensus 94 ~-----------~~~~~~~~~~~~~dl~~~l~~l~~~~v~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 161 (348)
. ......++.|++..-..+++++|++++. ++|.||||+.|+++|..||+.|+++|.+++......+..
T Consensus 104 ~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~ 183 (362)
T d2pl5a1 104 LSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQI 183 (362)
T ss_dssp TSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHH
T ss_pred cccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHH
Confidence 1 1134578999999999999999999987 889999999999999999999999999998887765433
Q ss_pred HHHHHHHHHHHHh------h-----------------ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHH-----HH
Q 018947 162 WLYNKVMSNLLYY------Y-----------------GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRR-----LL 213 (348)
Q Consensus 162 ~~~~~~~~~~~~~------~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 213 (348)
... ......+.. . ++..+.....+...|................+.+.. ..
T Consensus 184 ~~~-~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~ 262 (362)
T d2pl5a1 184 AFN-EVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFV 262 (362)
T ss_dssp HHH-HHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSS
T ss_pred HHH-HHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHH
Confidence 221 111111111 0 000000011112222211110000000000001100 01
Q ss_pred hhhchhhHHHHHHHHcC-----CccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCC--cEEEEecC-CCCCc
Q 018947 214 DERQSSNVWHFLEAING-----RPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRY--SALVEVQA-CGSMV 283 (348)
Q Consensus 214 ~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~--~~~~~~~~-~gH~~ 283 (348)
.+.+...+....+.+.. ..++.+.+++|++|+|+|..+.|.+++ ..+++++.+++.+ +++++++. .||..
T Consensus 263 ~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHda 342 (362)
T d2pl5a1 263 DRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDS 342 (362)
T ss_dssp SCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGG
T ss_pred hcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcch
Confidence 11223333333333221 123456789999999999999999993 4556888887643 46777764 79999
Q ss_pred cccChhhhHHHHHHHHhh
Q 018947 284 TEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 284 ~~e~p~~~~~~i~~fl~~ 301 (348)
++.+.+++.+.|++||+.
T Consensus 343 FL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 343 FLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp GGSCCHHHHHHHHHHHHC
T ss_pred hccCHHHHHHHHHHHHcC
Confidence 999999999999999974
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.89 E-value=6e-22 Score=157.84 Aligned_cols=200 Identities=13% Similarity=0.058 Sum_probs=131.2
Q ss_pred CccceeecCCceeEEEEccC----C-CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC
Q 018947 20 GKDNLIKTSHGSLSVTIYGD----Q-DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS 94 (348)
Q Consensus 20 ~~~~~v~~~~~~l~~~~~g~----~-~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 94 (348)
.+..++....|++.....-+ + ..+++|++|+.+..+.++.+.. ....+..+.+.||.|+.+|+||+|.|.....
T Consensus 8 ~~~l~i~gp~G~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~-~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~ 86 (218)
T d2fuka1 8 SAALTLDGPVGPLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKV-VTMAARALRELGITVVRFNFRSVGTSAGSFD 86 (218)
T ss_dssp CEEEEEEETTEEEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHH-HHHHHHHHHTTTCEEEEECCTTSTTCCSCCC
T ss_pred ceEEEEeCCCccEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChH-HHHHHHHHHHcCCeEEEeecCCCccCCCccC
Confidence 34445666778876654321 1 2235688896543322222111 1123345677899999999999999975422
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 95 DDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
. .....+|....+..+.++.+.++++++||||||.+++.+|.+. .++++|+++++....
T Consensus 87 ~--~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~----------------- 145 (218)
T d2fuka1 87 H--GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW----------------- 145 (218)
T ss_dssp T--TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB-----------------
T ss_pred c--CcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccch-----------------
Confidence 1 1112233333333344555678999999999999999988875 488999998753200
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
.+ ....+.+|+|+|+|++|.
T Consensus 146 ------------------~~------------------------------------------~~~~~~~P~Lvi~G~~D~ 165 (218)
T d2fuka1 146 ------------------DF------------------------------------------SDVQPPAQWLVIQGDADE 165 (218)
T ss_dssp ------------------CC------------------------------------------TTCCCCSSEEEEEETTCS
T ss_pred ------------------hh------------------------------------------hccccccceeeEecCCCc
Confidence 00 001345799999999999
Q ss_pred CCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 255 FHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 255 ~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
+++ ...++.+.+.. ..+++++++++|+.. .+-+++.+.+.+|+++.-
T Consensus 166 ~vp~~~~~~l~~~~~~-~~~l~~i~ga~H~f~-~~~~~l~~~~~~~v~~~l 214 (218)
T d2fuka1 166 IVDPQAVYDWLETLEQ-QPTLVRMPDTSHFFH-RKLIDLRGALQHGVRRWL 214 (218)
T ss_dssp SSCHHHHHHHHTTCSS-CCEEEEETTCCTTCT-TCHHHHHHHHHHHHGGGC
T ss_pred CcCHHHHHHHHHHccC-CceEEEeCCCCCCCC-CCHHHHHHHHHHHHHHhc
Confidence 994 44556666654 478999999999755 455679999999999874
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=7.9e-23 Score=170.74 Aligned_cols=111 Identities=12% Similarity=0.003 Sum_probs=83.0
Q ss_pred cceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
...+..+|.++.+...+++++++|||+||++++...|.. . ...+ +++|+++|+||+|.|. +
T Consensus 5 ~~~~~~~~~~l~~l~~~~~~~~Pl~l~Hg~~gs~~~~~~------l-~~~L--~~~v~~~d~~g~~~~~----------~ 65 (286)
T d1xkta_ 5 SLLVNPEGPTLMRLNSVQSSERPLFLVHPIEGSTTVFHS------L-ASRL--SIPTYGLQCTRAAPLD----------S 65 (286)
T ss_dssp GSCCCTTSCSEEECCCCCCCSCCEEEECCTTCCCGGGHH------H-HHTC--SSCEEEECCCTTSCCS----------C
T ss_pred HHhcCCCCCEEEEecCCCCCCCeEEEECCCCccHHHHHH------H-HHHc--CCeEEEEeCCCCCCCC----------C
Confidence 345566777777777777778889999999999876532 1 2334 6899999999998763 6
Q ss_pred HHHHHHHHHH-HHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEec
Q 018947 102 VDDLADQIAE-VLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVS 151 (348)
Q Consensus 102 ~~~~~~dl~~-~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 151 (348)
++++++++.+ +++..+.++++|+||||||.+|+.+|.++|+++.++++++
T Consensus 66 ~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 66 IHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp HHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred HHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 7888887664 4566677899999999999999999999999988877665
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.88 E-value=1.2e-22 Score=145.26 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=86.9
Q ss_pred cceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLS 101 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 101 (348)
.-+++.+|.+++|...| ++|+|||+||.+ ..| .+.+.++|+||++|+||||.|+.+ .++
T Consensus 3 ~~~~~~~G~~l~y~~~G--~G~pvlllHG~~---~~w----------~~~L~~~yrvi~~DlpG~G~S~~p------~~s 61 (122)
T d2dsta1 3 AGYLHLYGLNLVFDRVG--KGPPVLLVAEEA---SRW----------PEALPEGYAFYLLDLPGYGRTEGP------RMA 61 (122)
T ss_dssp EEEEEETTEEEEEEEEC--CSSEEEEESSSG---GGC----------CSCCCTTSEEEEECCTTSTTCCCC------CCC
T ss_pred ceEEEECCEEEEEEEEc--CCCcEEEEeccc---ccc----------cccccCCeEEEEEeccccCCCCCc------ccc
Confidence 45789999999999999 789999999842 222 255678999999999999999743 479
Q ss_pred HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCC
Q 018947 102 VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRH 142 (348)
Q Consensus 102 ~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~ 142 (348)
.+++++++.++++++++++++++||||||.+++++++..+.
T Consensus 62 ~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 62 PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999997543
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=1.5e-21 Score=153.36 Aligned_cols=179 Identities=12% Similarity=0.069 Sum_probs=120.0
Q ss_pred CeEEEeCCCCCChhhh-ccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCce
Q 018947 43 PALVTYPDLALNYMSC-FQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (348)
Q Consensus 43 p~vvllHG~~~~~~~~-~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v 121 (348)
..|||+||++++.... +.. ....+.++||.|+++|+||+|.+ .++++++.+...++..+ .++
T Consensus 2 k~V~~vHG~~~~~~~~~~~~-----l~~~L~~~G~~v~~~d~p~~~~~-----------~~~~~~~~l~~~~~~~~-~~~ 64 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPW-----LKKRLLADGVQADILNMPNPLQP-----------RLEDWLDTLSLYQHTLH-ENT 64 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHH-----HHHHHHHTTCEEEEECCSCTTSC-----------CHHHHHHHHHTTGGGCC-TTE
T ss_pred CEEEEECCCCCCcchhHHHH-----HHHHHHhCCCEEEEeccCCCCcc-----------hHHHHHHHHHHHHhccC-CCc
Confidence 4699999999886542 221 23456678999999999999863 46778877777666544 789
Q ss_pred eEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCC
Q 018947 122 MCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVP 201 (348)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (348)
+++||||||.+++.++.+++......+++............ .. ...+.. .
T Consensus 65 ~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~----------------~~-----~~~~~~-~-------- 114 (186)
T d1uxoa_ 65 YLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTL----------------QM-----LDEFTQ-G-------- 114 (186)
T ss_dssp EEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC----------------GG-----GGGGTC-S--------
T ss_pred EEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhh----------------hh-----hhhhhc-c--------
Confidence 99999999999999999998764444443333222111000 00 000000 0
Q ss_pred ChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCC
Q 018947 202 ESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQAC 279 (348)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~ 279 (348)
........++.+|+++|+|++|++++ ..+.+++.++ +++++++++
T Consensus 115 ------------------------------~~~~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~~---~~~~~~~~~ 161 (186)
T d1uxoa_ 115 ------------------------------SFDHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQID---AALYEVQHG 161 (186)
T ss_dssp ------------------------------CCCHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHTT---CEEEEETTC
T ss_pred ------------------------------cccccccccCCCCEEEEecCCCCCCCHHHHHHHHHHcC---CEEEEeCCC
Confidence 00111122346799999999999994 4556777774 799999999
Q ss_pred CCCcccc---ChhhhHHHHHHHHhh
Q 018947 280 GSMVTEE---QPHAMLIPMEYFLMG 301 (348)
Q Consensus 280 gH~~~~e---~p~~~~~~i~~fl~~ 301 (348)
||+...+ .-.++.+.|.+||.+
T Consensus 162 gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 162 GHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp TTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred CCcCccccCcccHHHHHHHHHHHcC
Confidence 9987654 335788999999864
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.86 E-value=7.5e-22 Score=160.32 Aligned_cols=212 Identities=11% Similarity=-0.024 Sum_probs=122.3
Q ss_pred ccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Q 018947 37 YGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF 116 (348)
Q Consensus 37 ~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l 116 (348)
.+...+++|||+||++++...|. +. ...+ .+|.|+++|++|+|. ..+++++++. +..
T Consensus 12 ~~~~~~~~l~~lhg~~g~~~~~~------~l-a~~L-~~~~v~~~~~~g~~~------------~a~~~~~~i~---~~~ 68 (230)
T d1jmkc_ 12 MNQDQEQIIFAFPPVLGYGLMYQ------NL-SSRL-PSYKLCAFDFIEEED------------RLDRYADLIQ---KLQ 68 (230)
T ss_dssp ESTTCSEEEEEECCTTCCGGGGH------HH-HHHC-TTEEEEEECCCCSTT------------HHHHHHHHHH---HHC
T ss_pred ecCCCCCeEEEEcCCCCCHHHHH------HH-HHHC-CCCEEeccCcCCHHH------------HHHHHHHHHH---HhC
Confidence 44457789999999999987643 22 3444 489999999999863 2334444333 233
Q ss_pred CCCceeEEEeChhHHHHHHHHHhCCCCc---ceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccc
Q 018947 117 GLGAVMCMGVTAGAYILTLFAMKYRHRV---LGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE 193 (348)
Q Consensus 117 ~~~~v~lvGhS~Gg~ia~~~a~~~p~~v---~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (348)
+.++++|+||||||.+|+.+|.++|+++ ..++.+++............... .. ............
T Consensus 69 ~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~ 136 (230)
T d1jmkc_ 69 PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVE-----------SD-VEALMNVNRDNE 136 (230)
T ss_dssp CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC-------------------CC-HHHHHHHTTTCS
T ss_pred CCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhh-----------hh-hhhhhhcccccc
Confidence 5578999999999999999999877654 44455444332211111000000 00 011111111111
Q ss_pred ccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchH-HHHHHhhccCCcE
Q 018947 194 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEA-VHMTSKIDRRYSA 272 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~-~~~~~~~~~~~~~ 272 (348)
... .......+.... ....... ........+++|+++|+|++|..++.. ....+.... ..+
T Consensus 137 ~~~-----~~~~~~~~~~~~--------~~~~~~~----~~~~~~~~i~~p~l~i~g~~D~~~~~~~~~w~~~~~~-~~~ 198 (230)
T d1jmkc_ 137 ALN-----SEAVKHGLKQKT--------HAFYSYY----VNLISTGQVKADIDLLTSGADFDIPEWLASWEEATTG-AYR 198 (230)
T ss_dssp GGG-----SHHHHHHHHHHH--------HHHHHHH----HHCCCCSCBSSEEEEEECSSCCCCCTTEECSGGGBSS-CEE
T ss_pred ccc-----cHHHHHHHHHHH--------HHHHHhh----hcccccccccCcceeeeecCCcccchhHHHHHHhccC-CcE
Confidence 110 222222221111 0111111 111234678999999999999987422 223333332 478
Q ss_pred EEEecCCCCCccccCh--hhhHHHHHHHHhhc
Q 018947 273 LVEVQACGSMVTEEQP--HAMLIPMEYFLMGY 302 (348)
Q Consensus 273 ~~~~~~~gH~~~~e~p--~~~~~~i~~fl~~~ 302 (348)
+++++ +||+.++++| +++++.|.+||++.
T Consensus 199 ~~~i~-g~H~~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 199 MKRGF-GTHAEMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp EEECS-SCGGGTTSHHHHHHHHHHHHHHHTCB
T ss_pred EEEEc-CCChhhcCCccHHHHHHHHHHHHhhc
Confidence 88887 7999998766 89999999999864
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.86 E-value=3.4e-20 Score=151.27 Aligned_cols=215 Identities=12% Similarity=0.031 Sum_probs=126.0
Q ss_pred ceeecCCceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCH
Q 018947 23 NLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSV 102 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 102 (348)
..++..|..+.+..-+ ..+|+||++||++++...+.... ..+.+.||.|+++|+||||.|.............
T Consensus 6 ~~~~l~g~~~~~~~p~-~~~~~vl~lHG~~~~~~~~~~~~------~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~ 78 (238)
T d1ufoa_ 6 ERLTLAGLSVLARIPE-APKALLLALHGLQGSKEHILALL------PGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYV 78 (238)
T ss_dssp EEEEETTEEEEEEEES-SCCEEEEEECCTTCCHHHHHHTS------TTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHH
T ss_pred EEEEECCEEEEecCCC-CCCeEEEEeCCCCCCHHHHHHHH------HHHHHCCCEEEEecCCCCCCCcccccccccchhh
Confidence 3455566665554443 45789999999999987654322 4667789999999999999987653332222222
Q ss_pred HHHHHHH-------HHHH---HHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHH
Q 018947 103 DDLADQI-------AEVL---NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLL 172 (348)
Q Consensus 103 ~~~~~dl-------~~~l---~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 172 (348)
++...++ ..++ ......++.++|||+||.+++.++..+|+....+.+++.........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~~~------------ 146 (238)
T d1ufoa_ 79 EEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQ------------ 146 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCT------------
T ss_pred hhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcchhheeeeeeecccccccc------------
Confidence 3322222 2222 22344789999999999999999999886444444433322211100
Q ss_pred HhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCC
Q 018947 173 YYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGES 252 (348)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~ 252 (348)
... .. ........ . . ..........++|+|+++|++
T Consensus 147 --~~~---------------~~-------~~~~~~~~----~---------------~-~~~~~~~~~~~~P~li~~G~~ 182 (238)
T d1ufoa_ 147 --GQV---------------VE-------DPGVLALY----Q---------------A-PPATRGEAYGGVPLLHLHGSR 182 (238)
T ss_dssp --TCC---------------CC-------CHHHHHHH----H---------------S-CGGGCGGGGTTCCEEEEEETT
T ss_pred --ccc---------------cc-------cccccchh----h---------------h-hhhhhhhhhcCCCeEEEEcCC
Confidence 000 00 11111000 0 0 111112234568999999999
Q ss_pred CCCCc--hHHHHHHhhccC----CcEEEEecCCCCCccccChhhhHHHHHHHHh
Q 018947 253 SPFHS--EAVHMTSKIDRR----YSALVEVQACGSMVTEEQPHAMLIPMEYFLM 300 (348)
Q Consensus 253 D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 300 (348)
|.+++ ....+.+.+... +.+++.++|+||...-+.-+...+.+.+||+
T Consensus 183 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 183 DHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp CTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 99983 445566666432 3578889999998764433344444444443
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=1.4e-21 Score=152.31 Aligned_cols=173 Identities=9% Similarity=0.013 Sum_probs=131.5
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCce
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAV 121 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~v 121 (348)
++||||+||++++...|. .....+.++||.|+.+|.+|+|.+... ...+.+++++++.+++++++.+++
T Consensus 2 ~~PVv~vHG~~~~~~~~~------~l~~~l~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~i~~~~~~~~~~~v 70 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFA------GIKSYLVSQGWSRDKLYAVDFWDKTGT-----NYNNGPVLSRFVQKVLDETGAKKV 70 (179)
T ss_dssp CCCEEEECCTTCCGGGGH------HHHHHHHHTTCCGGGEEECCCSCTTCC-----HHHHHHHHHHHHHHHHHHHCCSCE
T ss_pred CCCEEEECCCCCCHHHHH------HHHHHHHHcCCeEEEEecCCccccccc-----cchhhhhHHHHHHHHHHhcCCceE
Confidence 467999999999876653 333567788999999999999887532 235677888889999999999999
Q ss_pred eEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCC
Q 018947 122 MCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQ 199 (348)
Q Consensus 122 ~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (348)
+++||||||.++..++.++ +++|+++|+++++...... . ...
T Consensus 71 ~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~------------------~--------------~l~---- 114 (179)
T d1ispa_ 71 DIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG------------------K--------------ALP---- 114 (179)
T ss_dssp EEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------------------B--------------CCC----
T ss_pred EEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchh------------------h--------------hcC----
Confidence 9999999999999999887 6789999999875321100 0 000
Q ss_pred CCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEEEEecCC
Q 018947 200 VPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSALVEVQAC 279 (348)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (348)
. ......+|++.|+|+.|.+++... ..++. ++.+.+++.
T Consensus 115 --~----------------------------------~~~~~~~~~~~i~~~~D~~v~~~~---~~l~~--~~~~~~~~~ 153 (179)
T d1ispa_ 115 --G----------------------------------TDPNQKILYTSIYSSADMIVMNYL---SRLDG--ARNVQIHGV 153 (179)
T ss_dssp --C----------------------------------SCTTCCCEEEEEEETTCSSSCHHH---HCCBT--SEEEEESSC
T ss_pred --C----------------------------------cccccCceEEEEEecCCcccCchh---hcCCC--ceEEEECCC
Confidence 0 011235789999999999985432 24555 888999999
Q ss_pred CCCccccChhhhHHHHHHHHhhcc
Q 018947 280 GSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 280 gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
+|.....+| ++.+.|.+||+.-+
T Consensus 154 ~H~~l~~~~-~v~~~i~~~L~~~~ 176 (179)
T d1ispa_ 154 GHIGLLYSS-QVNSLIKEGLNGGG 176 (179)
T ss_dssp CTGGGGGCH-HHHHHHHHHHTTTC
T ss_pred CchhhccCH-HHHHHHHHHHhccC
Confidence 999888887 68999999998764
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=2.2e-20 Score=158.98 Aligned_cols=229 Identities=11% Similarity=0.074 Sum_probs=131.5
Q ss_pred eeec-CCceeEEEEc---cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC--
Q 018947 24 LIKT-SHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE-- 97 (348)
Q Consensus 24 ~v~~-~~~~l~~~~~---g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~-- 97 (348)
.+.+ +|.+++...+ +.+..|+||++||++++...+.. .+..+.++||.|+++|+||||.|..+.....
T Consensus 60 ~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~~~~------~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~ 133 (318)
T d1l7aa_ 60 TYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIH------EMVNWALHGYATFGMLVRGQQRSEDTSISPHGH 133 (318)
T ss_dssp EEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHH------HHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCC
T ss_pred EEECCCCcEEEEEEEecCCCCCceEEEEecCCCCCccchHH------HHHHHHHCCCEEEEEeeCCCCCCCCCcccchhh
Confidence 3444 4556654443 44456899999999888766532 3356778999999999999999875422110
Q ss_pred ------------CCCCHHHHHHHHHHHHH---HcC---CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCCh
Q 018947 98 ------------PVLSVDDLADQIAEVLN---HFG---LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSW 159 (348)
Q Consensus 98 ------------~~~~~~~~~~dl~~~l~---~l~---~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 159 (348)
..........|....++ ... ..++.++|+|+||..++..+...+. +.+++...+.... .
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~--~ 210 (318)
T d1l7aa_ 134 ALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN--F 210 (318)
T ss_dssp SSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC--H
T ss_pred hhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEecccccc--H
Confidence 01112233334333332 222 2468999999999999998888765 6666655554332 1
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhc
Q 018947 160 TEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLR 239 (348)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 239 (348)
.... ........ .......... .........+... ...+....+.
T Consensus 211 ~~~~---------~~~~~~~~----------------------~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~ 255 (318)
T d1l7aa_ 211 ERAI---------DVALEQPY----------------------LEINSFFRRN---GSPETEVQAMKTL-SYFDIMNLAD 255 (318)
T ss_dssp HHHH---------HHCCSTTT----------------------THHHHHHHHS---CCHHHHHHHHHHH-HTTCHHHHGG
T ss_pred HHHh---------hccccccc----------------------chhhhhhhcc---ccccccccccccc-cccccccccc
Confidence 1000 00000000 0000000000 0000000111111 1134455677
Q ss_pred cCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 240 KLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 240 ~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
++++|+|+++|++|.+++ .+..+.+.++. ..++++++++||....+ +.+.+.+||++
T Consensus 256 ~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~-~~~l~~~~~~gH~~~~~----~~~~~~~fl~~ 314 (318)
T d1l7aa_ 256 RVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVYRYFGHEYIPA----FQTEKLAFFKQ 314 (318)
T ss_dssp GCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCSSCCHH----HHHHHHHHHHH
T ss_pred cCCCCEEEEEECCCCCcCHHHHHHHHHHcCC-CcEEEEECCCCCCCcHH----HHHHHHHHHHH
Confidence 899999999999999993 45567777764 47899999999965544 44455555554
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.83 E-value=2.9e-19 Score=147.74 Aligned_cols=231 Identities=10% Similarity=0.034 Sum_probs=140.1
Q ss_pred ccceeec-CCceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
+..++.+ +|.++....+-+ .+.|+||++||.+...... .|......++++||.|+++|+||+|.+......
T Consensus 13 ~~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~----~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~ 88 (260)
T d2hu7a2 13 RLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSD----SWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRL 88 (260)
T ss_dssp EEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCS----SCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHH
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCc----cccHHHHHHHhhccccccceeeecccccccccc
Confidence 3445666 445776654422 2346899999854332211 122334566788999999999998765322110
Q ss_pred ----CCCCCCHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 96 ----DEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 96 ----~~~~~~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
......++|+.+.+..+.+.....++.++|+|+||.+++.++..+|+.+++++..++...... ..
T Consensus 89 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~---~~-------- 157 (260)
T d2hu7a2 89 KIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEE---MY-------- 157 (260)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHH---HH--------
T ss_pred ccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhh---hh--------
Confidence 001112344444444444444457889999999999999999999999999998887654211 00
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecC
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 251 (348)
. ...... .......... ..+ .+.. .+....+.++++|+|+++|+
T Consensus 158 --~-~~~~~~-~~~~~~~~~~---------~~~-------------------~~~~----~~~~~~~~~~~~P~liihG~ 201 (260)
T d2hu7a2 158 --E-LSDAAF-RNFIEQLTGG---------SRE-------------------IMRS----RSPINHVDRIKEPLALIHPQ 201 (260)
T ss_dssp --H-TCCHHH-HHHHHHHHCS---------CHH-------------------HHHH----TCGGGCGGGCCSCEEEEEET
T ss_pred --c-cccccc-cccccccccc---------ccc-------------------cccc----cchhhcccccCCCceeeecc
Confidence 0 000000 0001000000 000 0000 12334467889999999999
Q ss_pred CCCCC--chHHHHHHhhccC--CcEEEEecCCCCCccc-cChhhhHHHHHHHHhhc
Q 018947 252 SSPFH--SEAVHMTSKIDRR--YSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 252 ~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 302 (348)
+|..+ ..+..+.+.+.+. .+++++++++||.... ++...+.+.+.+||++.
T Consensus 202 ~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~h 257 (260)
T d2hu7a2 202 NDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 257 (260)
T ss_dssp TCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred cCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHHH
Confidence 99988 3556677766543 3689999999997644 66777888888999875
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.81 E-value=1.6e-19 Score=148.56 Aligned_cols=209 Identities=16% Similarity=0.096 Sum_probs=129.6
Q ss_pred CCCCeEEEeCCCC--CChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHc
Q 018947 40 QDKPALVTYPDLA--LNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL-NHF 116 (348)
Q Consensus 40 ~~~p~vvllHG~~--~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l-~~l 116 (348)
+.+|+|+|+||+. ++.. +|..+ ...+...+.|+++|+||+|.++.. ..+++++++++.+.| +..
T Consensus 40 ~~~~~l~c~~~~~~gg~~~-~y~~L------a~~L~~~~~V~al~~pG~~~~e~~------~~s~~~~a~~~~~~i~~~~ 106 (255)
T d1mo2a_ 40 PGEVTVICCAGTAAISGPH-EFTRL------AGALRGIAPVRAVPQPGYEEGEPL------PSSMAAVAAVQADAVIRTQ 106 (255)
T ss_dssp SCSSEEEEECCCSSSCSGG-GGHHH------HHHHTTTCCEEEECCTTSSTTCCE------ESSHHHHHHHHHHHHHHTT
T ss_pred CCCCeEEEECCCCCCCCHH-HHHHH------HHhcCCCceEEEEeCCCcCCCCCC------CCCHHHHHHHHHHHHHHhC
Confidence 5678999999852 3332 23333 566777899999999999987532 468999999987666 556
Q ss_pred CCCceeEEEeChhHHHHHHHHHhC---CCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhccc
Q 018947 117 GLGAVMCMGVTAGAYILTLFAMKY---RHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKE 193 (348)
Q Consensus 117 ~~~~v~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (348)
+..+++|+||||||.+|+++|.+. ..+|.+++++++.......... ... .......+...
T Consensus 107 ~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~----~~~-------------~~~~~~~~~~~ 169 (255)
T d1mo2a_ 107 GDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMN----AWL-------------EELTATLFDRE 169 (255)
T ss_dssp SSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHH----HHH-------------HHHHTTCC---
T ss_pred CCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchh----hHH-------------HHHHHHhhccc
Confidence 678999999999999999999865 4569999999986543211110 000 00111111111
Q ss_pred ccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCchHHHHHHhhccCCcEE
Q 018947 194 VRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHSEAVHMTSKIDRRYSAL 273 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~ 273 (348)
.... .......+. .+++.+..+ ....+++|++++.+++|............... ..++
T Consensus 170 ~~~~----~~~~l~a~~------------~~~~~~~~~-----~~~~~~~p~l~v~a~~~~~~~~~~~w~~~~~~-~~~~ 227 (255)
T d1mo2a_ 170 TVRM----DDTRLTALG------------AYDRLTGQW-----RPRETGLPTLLVSAGEPMGPWPDDSWKPTWPF-EHDT 227 (255)
T ss_dssp -CCC----CHHHHHHHH------------HHHHHHHHC-----CCCCCCCCEEEEECCSSSSCCTTCCCCCCCCS-SCEE
T ss_pred cccC----CHHHHHHHH------------HHHHHHhcC-----CCccccceEEEeecCCCCCcchhhHHHHhCCC-CcEE
Confidence 1000 121111111 111111110 12467899999999888654322222233322 3788
Q ss_pred EEecCCCCCccc-cChhhhHHHHHHHHhh
Q 018947 274 VEVQACGSMVTE-EQPHAMLIPMEYFLMG 301 (348)
Q Consensus 274 ~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 301 (348)
+.++ ++|+.++ ++++++++.|.+||.+
T Consensus 228 ~~v~-G~H~~ml~~~~~~~A~~i~~~L~G 255 (255)
T d1mo2a_ 228 VAVP-GDHFTMVQEHADAIARHIDAWLGG 255 (255)
T ss_dssp EECC-SCCSSCSSCCHHHHHHHHHHHHTC
T ss_pred EEEC-CCCcccccccHHHHHHHHHHHhCc
Confidence 8887 6998655 6899999999999964
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.79 E-value=3.6e-22 Score=170.11 Aligned_cols=251 Identities=8% Similarity=-0.036 Sum_probs=133.7
Q ss_pred CCceeEEEEccCCCCCeEEEeCCCCCChhhhcccc-ccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHH
Q 018947 28 SHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGL-FFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLA 106 (348)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~-~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 106 (348)
+...+.|..-.++++++|||+||++.++..|.... .+...+..++++||+|+++|+||||.|..+ ...++..+++
T Consensus 44 ~~~~v~~~~p~~~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~----~~~~~~~~~~ 119 (318)
T d1qlwa_ 44 DQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATD----ISAINAVKLG 119 (318)
T ss_dssp SCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCC----CHHHHHHHTT
T ss_pred ceEEEEEECCCCCCCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCc----cccCCHHHHH
Confidence 33345555555567778999999999988874321 111234568889999999999999999643 2234555556
Q ss_pred HHHHHHHHHcCC--CceeEEEeChhHHHHHHHHHhCCCC-cceEEEecCCCCCCChH--HHHHHHHHHHHHHhhccchhH
Q 018947 107 DQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHR-VLGLILVSPLCKAPSWT--EWLYNKVMSNLLYYYGMCGVV 181 (348)
Q Consensus 107 ~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 181 (348)
+++.+.++.+.. .+..++|||+||.++..++...... ...+++.+......... ........
T Consensus 120 ~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 186 (318)
T d1qlwa_ 120 KAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANL------------- 186 (318)
T ss_dssp SSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHH-------------
T ss_pred HHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHH-------------
Confidence 666666655433 4567889999999988777655332 22222222221110000 00000000
Q ss_pred HHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHH-HHcCCccHHhhhccCCccEEEEecCCCCCCch--
Q 018947 182 KELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLE-AINGRPDISEGLRKLQCRSLIFVGESSPFHSE-- 258 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~-- 258 (348)
................ ........... .....+..... ..............+++|+|+++|++|..++.
T Consensus 187 -~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~ 259 (318)
T d1qlwa_ 187 -SKLAIKLDGTVLLSHS---QSGIYPFQTAA---MNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWA 259 (318)
T ss_dssp -HHHHHHHTSEEEEEEG---GGTTHHHHHHH---HCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTH
T ss_pred -HHHHhhhccccchhhh---cccchhhhhhh---hhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhh
Confidence 0000000000000000 00000000000 00000000000 00011233445677899999999999998841
Q ss_pred -----HHHHHHhhcc--CCcEEEEec-----CCCCCccccCh-hhhHHHHHHHHhhc
Q 018947 259 -----AVHMTSKIDR--RYSALVEVQ-----ACGSMVTEEQP-HAMLIPMEYFLMGY 302 (348)
Q Consensus 259 -----~~~~~~~~~~--~~~~~~~~~-----~~gH~~~~e~p-~~~~~~i~~fl~~~ 302 (348)
...+.+.+.. .+++++.+| |+||+++.|.+ +++++.|.+||++.
T Consensus 260 ~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 260 PRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN 316 (318)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhc
Confidence 1123333332 237788865 57899999865 89999999999986
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.77 E-value=2.1e-17 Score=140.73 Aligned_cols=224 Identities=7% Similarity=-0.023 Sum_probs=127.0
Q ss_pred CCceeEEEEcc----CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC------
Q 018947 28 SHGSLSVTIYG----DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE------ 97 (348)
Q Consensus 28 ~~~~l~~~~~g----~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~------ 97 (348)
+|.+++...+- ++..|+||++||++.+...+. ....++++||.|+++|+||||.|........
T Consensus 64 dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~-------~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~ 136 (322)
T d1vlqa_ 64 RGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPH-------DWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPV 136 (322)
T ss_dssp GGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGG-------GGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSB
T ss_pred CCcEEEEEEEeccCCCCCccEEEEecCCCCCcCcHH-------HHHHHHhCCCEEEEeeccccCCCCCCccccccccccc
Confidence 56677765542 234478999999887654332 1246778999999999999998865321100
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHc------CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 98 ---------------PVLSVDDLADQIAEVLNHF------GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 98 ---------------~~~~~~~~~~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
..........|+...++.+ +..++.++|+|+||.+++..+...+ ++++++...+....
T Consensus 137 ~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~ 215 (322)
T d1vlqa_ 137 DPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH 215 (322)
T ss_dssp CCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC
T ss_pred cccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCcccc
Confidence 0111223334444444332 2246899999999999998777665 68888876655442
Q ss_pred CChHHHHHHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHh
Q 018947 157 PSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISE 236 (348)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (348)
.. ... . ....... . ....+.... ..........+ ...+...
T Consensus 216 ~~--~~~--~-------~~~~~~~--~-~~~~~~~~~------------------------~~~~~~~~~~~-~~~d~~~ 256 (322)
T d1vlqa_ 216 FR--RAV--Q-------LVDTHPY--A-EITNFLKTH------------------------RDKEEIVFRTL-SYFDGVN 256 (322)
T ss_dssp HH--HHH--H-------HCCCTTH--H-HHHHHHHHC------------------------TTCHHHHHHHH-HTTCHHH
T ss_pred HH--HHH--h-------hccccch--h-hHHhhhhcC------------------------cchhhhHHHHh-hhhhHHH
Confidence 11 000 0 0000000 0 000000000 00000111111 1135556
Q ss_pred hhccCCccEEEEecCCCCCCc--hHHHHHHhhccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 237 GLRKLQCRSLIFVGESSPFHS--EAVHMTSKIDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 237 ~l~~i~~Pvl~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+.++++|+|+++|++|.+++ ....+.+.++. .++++++|+++|.... +.-.+...+||+++
T Consensus 257 ~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~-~~~l~~~p~~~H~~~~---~~~~~~~~~~l~~~ 320 (322)
T d1vlqa_ 257 FAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIYPYNNHEGGG---SFQAVEQVKFLKKL 320 (322)
T ss_dssp HHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEETTCCTTTTH---HHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCC-CeEEEEECCCCCCCcc---ccCHHHHHHHHHHH
Confidence 677899999999999999984 34456666664 3789999999994421 11223345677664
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.75 E-value=4.2e-18 Score=144.59 Aligned_cols=114 Identities=14% Similarity=0.098 Sum_probs=93.1
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~ 120 (348)
.+.+|||+||++++...+...-+|......+.++||+|+++|+||+|.|+.+ ....+++++++.++++.++.++
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~------~~~~~~l~~~i~~~~~~~~~~~ 80 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGP------NGRGEQLLAYVKQVLAATGATK 80 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTST------TSHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCC------cccHHHHHHHHHHHHHHhCCCC
Confidence 3446899999988876543222354555667778999999999999988643 2467899999999999999999
Q ss_pred eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChH
Q 018947 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWT 160 (348)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 160 (348)
+++|||||||.++..++.++|++|+++|+++++.......
T Consensus 81 v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~gs~~a 120 (319)
T d1cvla_ 81 VNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFA 120 (319)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHH
T ss_pred EEEEeccccHHHHHHHHHHCccccceEEEECCCCCCChHH
Confidence 9999999999999999999999999999999876644433
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.73 E-value=8.1e-17 Score=132.59 Aligned_cols=179 Identities=11% Similarity=0.054 Sum_probs=121.8
Q ss_pred ceeEEEEc-cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 018947 30 GSLSVTIY-GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQ 108 (348)
Q Consensus 30 ~~l~~~~~-g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d 108 (348)
+.++|-.. ++..-|.||++||++++...+. .....+.++||.|+++|++|++... .....++.+.
T Consensus 39 ~~ly~P~~~~~g~~P~Vv~~HG~~g~~~~~~------~~a~~lA~~Gy~V~~~d~~~~~~~~--------~~~~~d~~~~ 104 (260)
T d1jfra_ 39 GTIYYPTSTADGTFGAVVISPGFTAYQSSIA------WLGPRLASQGFVVFTIDTNTTLDQP--------DSRGRQLLSA 104 (260)
T ss_dssp EEEEEESCCTTCCEEEEEEECCTTCCGGGTT------THHHHHHTTTCEEEEECCSSTTCCH--------HHHHHHHHHH
T ss_pred EEEEEcCCCCCCCccEEEEECCCCCCHHHHH------HHHHHHHhCCCEEEEEeeCCCcCCc--------hhhHHHHHHH
Confidence 35655432 3233479999999998876532 2346778899999999999886431 1112233333
Q ss_pred HHHHHHH------cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHH
Q 018947 109 IAEVLNH------FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVK 182 (348)
Q Consensus 109 l~~~l~~------l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (348)
+..+.+. ++.+++.++|||+||.+++.++...+ ++.++|.+.+.....
T Consensus 105 ~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~~------------------------- 158 (260)
T d1jfra_ 105 LDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTDK------------------------- 158 (260)
T ss_dssp HHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSCC-------------------------
T ss_pred HHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhc-cchhheeeecccccc-------------------------
Confidence 3333332 33468999999999999998888776 677777766532110
Q ss_pred HHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc---hH
Q 018947 183 ELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS---EA 259 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~---~~ 259 (348)
.+.++++|+|+++|++|.+++ ..
T Consensus 159 ------------------------------------------------------~~~~~~~P~l~i~G~~D~~vp~~~~~ 184 (260)
T d1jfra_ 159 ------------------------------------------------------TWPELRTPTLVVGADGDTVAPVATHS 184 (260)
T ss_dssp ------------------------------------------------------CCTTCCSCEEEEEETTCSSSCTTTTH
T ss_pred ------------------------------------------------------cccccccceeEEecCCCCCCCHHHHH
Confidence 012467899999999999884 23
Q ss_pred HHHHHhhcc-CCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 260 VHMTSKIDR-RYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 260 ~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
..+.+.++. ...+++++++++|.........+.+.+..||+..
T Consensus 185 ~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~ 228 (260)
T d1jfra_ 185 KPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRF 228 (260)
T ss_dssp HHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHH
Confidence 445555543 2367899999999887766678888889999876
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.72 E-value=9.6e-17 Score=132.21 Aligned_cols=230 Identities=11% Similarity=0.075 Sum_probs=131.5
Q ss_pred cceeecCCceeEEEEccC----CCC--CeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC-C
Q 018947 22 DNLIKTSHGSLSVTIYGD----QDK--PALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI-S 94 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~----~~~--p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~-~ 94 (348)
..++..++.++.|..+=+ +++ |+||++||.+.......... .......+..+||.|+.+|+||+|.+.... .
T Consensus 6 ~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~-~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~ 84 (258)
T d2bgra2 6 LDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFR-LNWATYLASTENIIVASFDGRGSGYQGDKIMH 84 (258)
T ss_dssp EEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCC-CSHHHHHHHTTCCEEEEECCTTCSSSCHHHHG
T ss_pred EEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccC-cCHHHHHHhcCCcEEEeecccccCCcchHHHH
Confidence 345666899999987632 223 79999999522221111111 001112345689999999999987543110 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHc----CC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHH
Q 018947 95 DDEPVLSVDDLADQIAEVLNHF----GL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVM 168 (348)
Q Consensus 95 ~~~~~~~~~~~~~dl~~~l~~l----~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 168 (348)
.....+...+ .+++.++++.+ .+ +++.++|+|+||.+++.++..+|+.+...+...............
T Consensus 85 ~~~~~~~~~~-~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 158 (258)
T d2bgra2 85 AINRRLGTFE-VEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVY----- 158 (258)
T ss_dssp GGTTCTTSHH-HHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHH-----
T ss_pred hhhhhhhhHH-HHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccccccc-----
Confidence 0011111122 22233333332 22 469999999999999999999999888877766655432111100
Q ss_pred HHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccC-CccEEE
Q 018947 169 SNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKL-QCRSLI 247 (348)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~ 247 (348)
......... .....+.... .+....+.++ ++|+++
T Consensus 159 -----------------~~~~~~~~~-------~~~~~~~~~~--------------------~~~~~~~~~~~~~P~li 194 (258)
T d2bgra2 159 -----------------TERYMGLPT-------PEDNLDHYRN--------------------STVMSRAENFKQVEYLL 194 (258)
T ss_dssp -----------------HHHHHCCCS-------TTTTHHHHHH--------------------SCSGGGGGGGGGSEEEE
T ss_pred -----------------cchhccccc-------chhhHHHhhc--------------------ccccccccccccCChhe
Confidence 000001000 0000111100 0111122233 379999
Q ss_pred EecCCCCCCc--hHHHHHHhhccC--CcEEEEecCCCCCccc-cChhhhHHHHHHHHhhc
Q 018947 248 FVGESSPFHS--EAVHMTSKIDRR--YSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 302 (348)
++|++|..++ .+.++.+.+... .++++++++++|.... +..+.+.+.+.+||++.
T Consensus 195 ~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~ 254 (258)
T d2bgra2 195 IHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQC 254 (258)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999883 555666665432 3789999999996543 56778899999999886
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.72 E-value=5.8e-16 Score=123.86 Aligned_cols=195 Identities=11% Similarity=0.115 Sum_probs=128.6
Q ss_pred ceeecCCceeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKTSHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVL 100 (348)
Q Consensus 23 ~~v~~~~~~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 100 (348)
.+++...|+|.....-+ +..+++|++||.+..+.++.+.. ....+..+...||.|+.+|+||.|.|..... .
T Consensus 3 v~i~g~~G~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~-~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~-----~ 76 (218)
T d2i3da1 3 VIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQI-VYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD-----H 76 (218)
T ss_dssp EEEEETTEEEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHH-HHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-----S
T ss_pred EEEeCCCccEEEEEeCCCCCCCCEEEEECCCcCcCCcCCcHH-HHHHHHHHHhcCeeEEEEecCccCCCccccc-----c
Confidence 45666667887654432 35679999998543332222111 1123345677899999999999999974422 2
Q ss_pred CHHHHHHHHHHHH----HHc-CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhh
Q 018947 101 SVDDLADQIAEVL----NHF-GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYY 175 (348)
Q Consensus 101 ~~~~~~~dl~~~l----~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (348)
...+. +|..+++ ... ...+++++|+|+||.+++.++.+.+ .+.+++++.+.......
T Consensus 77 ~~~e~-~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~~---------------- 138 (218)
T d2i3da1 77 GAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYDF---------------- 138 (218)
T ss_dssp SHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSCC----------------
T ss_pred chhHH-HHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccch----------------
Confidence 22222 3333323 222 2367899999999999999888765 46777777654432100
Q ss_pred ccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCC
Q 018947 176 GMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPF 255 (348)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~ 255 (348)
..+....+|+++++|++|.+
T Consensus 139 ------------------------------------------------------------~~~~~~~~p~l~i~g~~D~~ 158 (218)
T d2i3da1 139 ------------------------------------------------------------SFLAPCPSSGLIINGDADKV 158 (218)
T ss_dssp ------------------------------------------------------------TTCTTCCSCEEEEEETTCSS
T ss_pred ------------------------------------------------------------hhccccCCCceeeeccccee
Confidence 01223467999999999999
Q ss_pred C--chHHHHHHhhccC---CcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 256 H--SEAVHMTSKIDRR---YSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 256 ~--~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+ .....+.+.+..+ ..+++++++++|+.. .+-+++.+.+.+||++.
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~l~~~ 209 (218)
T d2i3da1 159 APEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRR 209 (218)
T ss_dssp SCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHHHHHHHh
Confidence 8 3444555555432 368999999999876 67789999999999876
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.72 E-value=9e-17 Score=132.70 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=74.4
Q ss_pred CceeEEEEccCCCCCeEEEeCCCCCCh---hhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHH
Q 018947 29 HGSLSVTIYGDQDKPALVTYPDLALNY---MSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDL 105 (348)
Q Consensus 29 ~~~l~~~~~g~~~~p~vvllHG~~~~~---~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 105 (348)
...+.+...++..+|+||++||.|... .......+.......+.+.||.|+++|+|..+... ....++|.
T Consensus 18 ~~~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~-------~~~~~~d~ 90 (263)
T d1vkha_ 18 NKTLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-------NPRNLYDA 90 (263)
T ss_dssp GGCEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-------TTHHHHHH
T ss_pred cceEEeccCCCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchh-------hhHHHHhh
Confidence 345666666667889999999964211 01000010111123445789999999999875432 23467788
Q ss_pred HHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhCCCC
Q 018947 106 ADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHR 143 (348)
Q Consensus 106 ~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~ 143 (348)
.+.+..+++..+..+++++|||+||.+++.++...++.
T Consensus 91 ~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~~~~~~ 128 (263)
T d1vkha_ 91 VSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDP 128 (263)
T ss_dssp HHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSC
T ss_pred hhhhhcccccccccceeeeccCcHHHHHHHHHHhccCc
Confidence 88888888888889999999999999999998876653
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.71 E-value=2.7e-16 Score=124.58 Aligned_cols=187 Identities=21% Similarity=0.235 Sum_probs=125.6
Q ss_pred CceeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCC--CCCCCCCCCHHHH-
Q 018947 29 HGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAA--ISDDEPVLSVDDL- 105 (348)
Q Consensus 29 ~~~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~--~~~~~~~~~~~~~- 105 (348)
++-++....|.+++|+||++||.+++...|... ...+..++.|++++.+..+.+... ..........++.
T Consensus 4 ~~y~~~~~~~~~~~P~vi~lHG~G~~~~~~~~~-------~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (203)
T d2r8ba1 4 DSYFHKSRAGVAGAPLFVLLHGTGGDENQFFDF-------GARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLE 76 (203)
T ss_dssp TSSCEEEECCCTTSCEEEEECCTTCCHHHHHHH-------HHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHH
T ss_pred ceeEeecCCCCCCCCEEEEECCCCCCHHHHHHH-------HHHhccCCeEEEeccccccccccccccccCccccchhHHH
Confidence 344666667778899999999999988765422 245567899999987754433211 1111122333333
Q ss_pred --HHHHHHHH----HHcCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccch
Q 018947 106 --ADQIAEVL----NHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCG 179 (348)
Q Consensus 106 --~~dl~~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (348)
++.+..++ ...+.++++++|+|+||.+++.++.++|+.+.+++++++.......
T Consensus 77 ~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~-------------------- 136 (203)
T d2r8ba1 77 RATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK-------------------- 136 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC--------------------
T ss_pred HHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc--------------------
Confidence 33444333 3467789999999999999999999999999999998875432100
Q ss_pred hHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--c
Q 018947 180 VVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--S 257 (348)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~ 257 (348)
. . ......|+++++|++|+++ .
T Consensus 137 --------------~-----------------------------------~-------~~~~~~~~~i~hG~~D~~vp~~ 160 (203)
T d2r8ba1 137 --------------I-----------------------------------S-------PAKPTRRVLITAGERDPICPVQ 160 (203)
T ss_dssp --------------C-----------------------------------C-------CCCTTCEEEEEEETTCTTSCHH
T ss_pred --------------c-----------------------------------c-------cccccchhhccccCCCCcccHH
Confidence 0 0 0122468999999999999 4
Q ss_pred hHHHHHHhhccCC--cEEEEecCCCCCccccChhhhHHHHHHHHhhcc
Q 018947 258 EAVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMGYG 303 (348)
Q Consensus 258 ~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 303 (348)
..+++.+.+...+ .++++++ +||.+. ++ ..+.+.+||.++|
T Consensus 161 ~~~~~~~~L~~~g~~v~~~~~~-ggH~~~---~~-~~~~~~~wl~~~g 203 (203)
T d2r8ba1 161 LTKALEESLKAQGGTVETVWHP-GGHEIR---SG-EIDAVRGFLAAYG 203 (203)
T ss_dssp HHHHHHHHHHHHSSEEEEEEES-SCSSCC---HH-HHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHCCCCEEEEEEC-CCCcCC---HH-HHHHHHHHHHhcC
Confidence 5556676665433 6788887 589754 33 4566889998875
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.9e-16 Score=127.80 Aligned_cols=182 Identities=10% Similarity=0.101 Sum_probs=114.5
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCC---------CCCCC--CCCCCCCC---HHHH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF---------GAAAI--SDDEPVLS---VDDL 105 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~---------S~~~~--~~~~~~~~---~~~~ 105 (348)
+..++|||+||+|++...+... ...+...++.+++++-|.+.. +.... ........ +++.
T Consensus 19 ~~~~~VI~lHG~G~~~~~~~~~------~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~ 92 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGHGWAEA------FAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQA 92 (229)
T ss_dssp CCSEEEEEECCSSSCHHHHHHH------HHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHHHHHHH------HHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHH
Confidence 3456899999999998775322 245567799999988653211 10000 00011112 4444
Q ss_pred HHHHHHHHHH-----cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchh
Q 018947 106 ADQIAEVLNH-----FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (348)
Q Consensus 106 ~~dl~~~l~~-----l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (348)
++.+..+++. ++.++++++|+|+||.+++.++.++|+++++++.+++......
T Consensus 93 ~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~---------------------- 150 (229)
T d1fj2a_ 93 AENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA---------------------- 150 (229)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG----------------------
T ss_pred HHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccc----------------------
Confidence 5555555543 3446899999999999999999999999999998876432100
Q ss_pred HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc--h
Q 018947 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS--E 258 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~--~ 258 (348)
.+..... ...+.++|+++++|++|.+++ .
T Consensus 151 --------~~~~~~~-----------------------------------------~~~~~~~Pvli~hG~~D~~vp~~~ 181 (229)
T d1fj2a_ 151 --------SFPQGPI-----------------------------------------GGANRDISILQCHGDCDPLVPLMF 181 (229)
T ss_dssp --------GSCSSCC-----------------------------------------CSTTTTCCEEEEEETTCSSSCHHH
T ss_pred --------ccccccc-----------------------------------------ccccccCceeEEEcCCCCeeCHHH
Confidence 0000000 001235799999999999984 3
Q ss_pred HHHHHHhh----ccCCcEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 259 AVHMTSKI----DRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 259 ~~~~~~~~----~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
.+...+.+ ...+.++++++++||.+. ++ ..+.+.+||++.
T Consensus 182 ~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~---~~-~~~~~~~wL~~~ 225 (229)
T d1fj2a_ 182 GSLTVEKLKTLVNPANVTFKTYEGMMHSSC---QQ-EMMDVKQFIDKL 225 (229)
T ss_dssp HHHHHHHHHHHSCGGGEEEEEETTCCSSCC---HH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEEEeCCCCCccC---HH-HHHHHHHHHHhH
Confidence 44444433 223478899999999654 33 356688999886
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.70 E-value=1.1e-16 Score=127.43 Aligned_cols=183 Identities=11% Similarity=0.074 Sum_probs=116.0
Q ss_pred eeEEEEc--cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC--CCCCCCCCCCCCCCCHHHH-
Q 018947 31 SLSVTIY--GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH--EFGAAAISDDEPVLSVDDL- 105 (348)
Q Consensus 31 ~l~~~~~--g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~~- 105 (348)
.+.|... |.++.|+||++||.+++...|.. +...+..++.+++++.+.. |...............++.
T Consensus 10 ~~~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~-------l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (209)
T d3b5ea1 10 AFPYRLLGAGKESRECLFLLHGSGVDETTLVP-------LARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSIL 82 (209)
T ss_dssp SSCEEEESTTSSCCCEEEEECCTTBCTTTTHH-------HHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHH
T ss_pred cceeEecCCCCCCCCEEEEEcCCCCCHHHHHH-------HHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHH
Confidence 3444444 45678999999999998765431 1345667899999876421 1000000000112233333
Q ss_pred ------HHHHHHHHHHcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 106 ------ADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 106 ------~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
.+.|..+.++.+ .++++++|||+||.+++.++.++|+++++++++++......
T Consensus 83 ~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~------------------- 143 (209)
T d3b5ea1 83 AETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH------------------- 143 (209)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-------------------
T ss_pred HHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccc-------------------
Confidence 223334444444 46899999999999999999999999999999887432100
Q ss_pred chhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC-
Q 018947 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH- 256 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~- 256 (348)
. ......++|+++++|++|+++
T Consensus 144 ------------------------~---------------------------------~~~~~~~~p~~~~~G~~D~~~~ 166 (209)
T d3b5ea1 144 ------------------------V---------------------------------PATDLAGIRTLIIAGAADETYG 166 (209)
T ss_dssp ------------------------C---------------------------------CCCCCTTCEEEEEEETTCTTTG
T ss_pred ------------------------c---------------------------------cccccccchheeeeccCCCccC
Confidence 0 001123579999999999998
Q ss_pred chHHHHHHhhccCC--cEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 257 SEAVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 257 ~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
+...++.+.+...+ .+++++++ ||.+. ++ ..+.+.+||.+
T Consensus 167 ~~~~~~~~~l~~~G~~v~~~~~~g-gH~i~---~~-~~~~~~~wl~~ 208 (209)
T d3b5ea1 167 PFVPALVTLLSRHGAEVDARIIPS-GHDIG---DP-DAAIVRQWLAG 208 (209)
T ss_dssp GGHHHHHHHHHHTTCEEEEEEESC-CSCCC---HH-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCeEEEEECC-CCCCC---HH-HHHHHHHHhCC
Confidence 45566666665533 67888875 89664 33 44567899853
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.69 E-value=3.6e-16 Score=130.41 Aligned_cols=107 Identities=11% Similarity=0.101 Sum_probs=85.7
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLG 119 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~ 119 (348)
..+++|||+||++.+...++ |......+.+.||+|+.+|+||+|.++. ..+.+++++.+..+++..+.+
T Consensus 29 ~~~~PVvlvHG~~~~~~~~~----~~~~~~~L~~~Gy~v~~~d~~g~g~~d~-------~~sae~la~~i~~v~~~~g~~ 97 (317)
T d1tcaa_ 29 SVSKPILLVPGTGTTGPQSF----DSNWIPLSTQLGYTPCWISPPPFMLNDT-------QVNTEYMVNAITALYAGSGNN 97 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHH----TTTHHHHHHTTTCEEEEECCTTTTCSCH-------HHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCcEEEECCCCCCCcchh----HHHHHHHHHhCCCeEEEecCCCCCCCch-------HhHHHHHHHHHHHHHHhccCC
Confidence 34568999999998876532 2233456677899999999999987642 245677788888888888889
Q ss_pred ceeEEEeChhHHHHHHHHHhCC---CCcceEEEecCCCCCC
Q 018947 120 AVMCMGVTAGAYILTLFAMKYR---HRVLGLILVSPLCKAP 157 (348)
Q Consensus 120 ~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~ 157 (348)
++.||||||||.++..++.++| ++|+.+|.+++.....
T Consensus 98 kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt 138 (317)
T d1tcaa_ 98 KLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 138 (317)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCB
T ss_pred ceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCCc
Confidence 9999999999999999999888 4699999999877643
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=3.7e-16 Score=128.61 Aligned_cols=227 Identities=12% Similarity=0.102 Sum_probs=127.3
Q ss_pred cceeecCCceeEEEEccC-----C-CCCeEEEeCCCCCChh--hhccccccchhhhhhccCCeEEEEeCCCCCCCCCC--
Q 018947 22 DNLIKTSHGSLSVTIYGD-----Q-DKPALVTYPDLALNYM--SCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA-- 91 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~-----~-~~p~vvllHG~~~~~~--~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~-- 91 (348)
...++++|..|+...+-+ . +.|+||++||.+.... ..+... .....+.++||.|+++|.||.+....
T Consensus 5 ~~~i~~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~---~~~~~la~~G~~vv~~d~rGs~~~g~~~ 81 (258)
T d1xfda2 5 YRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVS---WETVMVSSHGAVVVKCDGRGSGFQGTKL 81 (258)
T ss_dssp BCCEEETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCS---HHHHHHHTTCCEEECCCCTTCSSSHHHH
T ss_pred EEEEeeCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcc---hHHHHHhcCCcEEEEeccccccccchhH
Confidence 345677888887655422 1 2379999999643322 112111 12234567799999999998653211
Q ss_pred --CCCCCCCCCCHHHHHHHHHHHHHHcC--CCceeEEEeChhHHHHHHHHHhCCC----CcceEEEecCCCCCCChHHHH
Q 018947 92 --AISDDEPVLSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRH----RVLGLILVSPLCKAPSWTEWL 163 (348)
Q Consensus 92 --~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~ 163 (348)
...........++..+.+..+++... .+++.++|||+||.+++.++...++ .+...+.+++...........
T Consensus 82 ~~~~~~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (258)
T d1xfda2 82 LHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAF 161 (258)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHH
T ss_pred hhhhhccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccccc
Confidence 00111111224444444444444433 3679999999999999988776654 366666666544432211111
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhcc-CC
Q 018947 164 YNKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRK-LQ 242 (348)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~ 242 (348)
...++..... .... .. .......+.+ .+
T Consensus 162 ----------------------~~~~~~~~~~------~~~~----------~~-------------~~s~~~~~~~~~~ 190 (258)
T d1xfda2 162 ----------------------SERYLGLHGL------DNRA----------YE-------------MTKVAHRVSALEE 190 (258)
T ss_dssp ----------------------HHHHHCCCSS------CCSS----------TT-------------TTCTHHHHTSCCS
T ss_pred ----------------------cccccccccc------chHH----------hh-------------ccchhhhhhhhhc
Confidence 0001110000 0000 00 0011111222 36
Q ss_pred ccEEEEecCCCCCCc--hHHHHHHhhccC--CcEEEEecCCCCCccc-cChhhhHHHHHHHHhhc
Q 018947 243 CRSLIFVGESSPFHS--EAVHMTSKIDRR--YSALVEVQACGSMVTE-EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 243 ~Pvl~i~g~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 302 (348)
+|+|+++|+.|..++ ....+.+.+... ..+++++|+++|.... +....+.+.+.+||++.
T Consensus 191 ~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~ 255 (258)
T d1xfda2 191 QQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 255 (258)
T ss_dssp CEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 899999999999883 444565555442 3789999999997654 45566778999999875
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.68 E-value=4.7e-17 Score=135.19 Aligned_cols=107 Identities=13% Similarity=0.045 Sum_probs=88.3
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCc
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGA 120 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~ 120 (348)
.+.+|||+||++++...+.. ..|......+.+.||+|+++|++|+|.+. ...+++++++.++++.++.++
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~-~yw~~i~~~L~~~G~~v~~~~~~~~~~~~---------~~a~~l~~~i~~~~~~~g~~~ 75 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGV-DYWFGIPSALRRDGAQVYVTEVSQLDTSE---------VRGEQLLQQVEEIVALSGQPK 75 (285)
T ss_dssp CSSCEEEECCTTCCSEETTE-ESSTTHHHHHHHTTCCEEEECCCSSSCHH---------HHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCEEEECCCCCCccccch-hhHHHHHHHHHhCCCEEEEeCCCCCCCcH---------HHHHHHHHHHHHHHHHcCCCe
Confidence 44459999999887655422 22445556667789999999999998643 467888999999999999999
Q ss_pred eeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 121 VMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 121 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
+++|||||||.++..++..+|++|+++|.++++....
T Consensus 76 v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~Gs 112 (285)
T d1ex9a_ 76 VNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGS 112 (285)
T ss_dssp EEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTTCC
T ss_pred EEEEEECccHHHHHHHHHHCCccceeEEEECCCCCCC
Confidence 9999999999999999999999999999999876543
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.66 E-value=1.2e-15 Score=120.71 Aligned_cols=176 Identities=14% Similarity=0.179 Sum_probs=115.3
Q ss_pred CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCC--CCCCCCCHHHHHH-------HH
Q 018947 39 DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAIS--DDEPVLSVDDLAD-------QI 109 (348)
Q Consensus 39 ~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~~~-------dl 109 (348)
++++|+||++||++++...+.. ....+.+++.|++++.+..+....... ........++..+ .+
T Consensus 11 ~~~~P~vi~lHG~g~~~~~~~~-------~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 83 (202)
T d2h1ia1 11 DTSKPVLLLLHGTGGNELDLLP-------LAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFL 83 (202)
T ss_dssp CTTSCEEEEECCTTCCTTTTHH-------HHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHH-------HHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHH
Confidence 4578999999999988765431 135566899999998654432211100 0111233333332 23
Q ss_pred HHHHHHcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 018947 110 AEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLK 187 (348)
Q Consensus 110 ~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (348)
..+.+..+ ..++.++|+|+||.+++.++.++|+++.+++++++......
T Consensus 84 ~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~----------------------------- 134 (202)
T d2h1ia1 84 DEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG----------------------------- 134 (202)
T ss_dssp HHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-----------------------------
T ss_pred HHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccc-----------------------------
Confidence 33334444 45899999999999999999999999999998876433100
Q ss_pred hhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--chHHHHHHh
Q 018947 188 RYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SEAVHMTSK 265 (348)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~~~~~~~~ 265 (348)
. ........|+++++|++|+++ ...+++.+.
T Consensus 135 -----~------------------------------------------~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~ 167 (202)
T d2h1ia1 135 -----M------------------------------------------QLANLAGKSVFIAAGTNDPICSSAESEELKVL 167 (202)
T ss_dssp -----C------------------------------------------CCCCCTTCEEEEEEESSCSSSCHHHHHHHHHH
T ss_pred -----c------------------------------------------cccccccchhhcccccCCCccCHHHHHHHHHH
Confidence 0 000123568999999999998 345567777
Q ss_pred hccCC--cEEEEecCCCCCccccChhhhHHHHHHHHhhc
Q 018947 266 IDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 266 ~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 302 (348)
+...+ .+++.++ +||.+. .+..+.+.+||++.
T Consensus 168 l~~~g~~~~~~~~~-ggH~~~----~~~~~~~~~wl~k~ 201 (202)
T d2h1ia1 168 LENANANVTMHWEN-RGHQLT----MGEVEKAKEWYDKA 201 (202)
T ss_dssp HHTTTCEEEEEEES-STTSCC----HHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEEEC-CCCcCC----HHHHHHHHHHHHHh
Confidence 77644 6778887 589653 44566788998763
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.59 E-value=9e-14 Score=112.20 Aligned_cols=195 Identities=10% Similarity=0.046 Sum_probs=117.2
Q ss_pred eeec-CCceeEEEEccC--CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCC---
Q 018947 24 LIKT-SHGSLSVTIYGD--QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDE--- 97 (348)
Q Consensus 24 ~v~~-~~~~l~~~~~g~--~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~--- 97 (348)
.+.+ +|..++.+..-+ ...|.||++|+..+...... ..+..+.+.||.|+++|+.|.+..........
T Consensus 7 ~~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~~~------~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~ 80 (233)
T d1dina_ 7 SIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMR------ETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQ 80 (233)
T ss_dssp CEECTTSCEECEEEECCSSSSEEEEEEECCTTBSCHHHH------HHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHH
T ss_pred EEEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCHHHH------HHHHHHHhcCCcceeeeeccCCCcCcccChHHHHH
Confidence 3444 566776665532 35679999996554332211 22356678899999999977654432211100
Q ss_pred --------CCCCHHHHHHHHHHHHHHcC-----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHH
Q 018947 98 --------PVLSVDDLADQIAEVLNHFG-----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLY 164 (348)
Q Consensus 98 --------~~~~~~~~~~dl~~~l~~l~-----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 164 (348)
...+.+....|+...++.+. ..++.++|+|+||.+++.++... .+.+.+.+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~~--------- 149 (233)
T d1dina_ 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVGL--------- 149 (233)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSCG---------
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceecccccccc---------
Confidence 12344455566666665442 14799999999999999887653 3444443211000
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCcc
Q 018947 165 NKVMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCR 244 (348)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 244 (348)
....+.+.++++|
T Consensus 150 -------------------------------------------------------------------~~~~~~~~~i~~P 162 (233)
T d1dina_ 150 -------------------------------------------------------------------EKQLNKVPEVKHP 162 (233)
T ss_dssp -------------------------------------------------------------------GGGGGGGGGCCSC
T ss_pred -------------------------------------------------------------------ccchhhhhccCCc
Confidence 0011223467899
Q ss_pred EEEEecCCCCCCc--hHHHHHHhhcc-CCcEEEEecCCCCCccccChh--------hhHHHHHHHHhhc
Q 018947 245 SLIFVGESSPFHS--EAVHMTSKIDR-RYSALVEVQACGSMVTEEQPH--------AMLIPMEYFLMGY 302 (348)
Q Consensus 245 vl~i~g~~D~~~~--~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~--------~~~~~i~~fl~~~ 302 (348)
+|+++|++|+.++ ..+.+.+.+.. ...+++++++++|..+.+..+ ...+.+.+||..+
T Consensus 163 vl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~ 231 (233)
T d1dina_ 163 ALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPL 231 (233)
T ss_dssp EEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred ceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 9999999999983 33334444433 237899999999976543332 2245667888776
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.57 E-value=3.7e-14 Score=116.14 Aligned_cols=184 Identities=12% Similarity=0.113 Sum_probs=110.8
Q ss_pred eeEEEEccCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 018947 31 SLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIA 110 (348)
Q Consensus 31 ~l~~~~~g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~ 110 (348)
++-++.-.+...|+|||+||.+....+... +......+.++||.|+.+|+|..+. .++.+..+|+.
T Consensus 51 ~lDiy~P~~~~~P~vv~iHGG~w~~g~~~~---~~~~a~~l~~~G~~Vv~~~YRl~p~-----------~~~p~~~~d~~ 116 (261)
T d2pbla1 51 KFDLFLPEGTPVGLFVFVHGGYWMAFDKSS---WSHLAVGALSKGWAVAMPSYELCPE-----------VRISEITQQIS 116 (261)
T ss_dssp EEEEECCSSSCSEEEEEECCSTTTSCCGGG---CGGGGHHHHHTTEEEEEECCCCTTT-----------SCHHHHHHHHH
T ss_pred EEEEeccCCCCCCeEEEECCCCCccCChhH---hhhHHHHHhcCCceeeccccccccc-----------ccCchhHHHHH
Confidence 343333333467899999996533222111 1223456778899999999997643 23444455544
Q ss_pred HHH----HHcCCCceeEEEeChhHHHHHHHHHhCC------CCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhccchh
Q 018947 111 EVL----NHFGLGAVMCMGVTAGAYILTLFAMKYR------HRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGV 180 (348)
Q Consensus 111 ~~l----~~l~~~~v~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (348)
+.+ +.. ..++.++|||.||.++..++.... ..+++++.+++..........
T Consensus 117 ~a~~~~~~~~-~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 177 (261)
T d2pbla1 117 QAVTAAAKEI-DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT------------------ 177 (261)
T ss_dssp HHHHHHHHHS-CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS------------------
T ss_pred HHHHHHHhcc-cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhh------------------
Confidence 444 443 378999999999999987665432 357888888876664321100
Q ss_pred HHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCC--ch
Q 018947 181 VKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFH--SE 258 (348)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~--~~ 258 (348)
....++.. ..+... . ........+...|+++++|++|..+ ..
T Consensus 178 ----~~~~~~~~---------~~~~~~-------~----------------~SP~~~~~~~~~P~li~~G~~D~~~~~~q 221 (261)
T d2pbla1 178 ----SMNEKFKM---------DADAAI-------A----------------ESPVEMQNRYDAKVTVWVGGAERPAFLDQ 221 (261)
T ss_dssp ----TTHHHHCC---------CHHHHH-------H----------------TCGGGCCCCCSCEEEEEEETTSCHHHHHH
T ss_pred ----hhcccccC---------CHHHHH-------H----------------hCchhhcccCCCeEEEEEecCCCchHHHH
Confidence 00000000 111000 0 0111223466799999999999765 45
Q ss_pred HHHHHHhhccCCcEEEEecCCCCCcccc
Q 018947 259 AVHMTSKIDRRYSALVEVQACGSMVTEE 286 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e 286 (348)
++.+.+.+. ++.+++++.+||-.++
T Consensus 222 s~~~~~~l~---~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 222 AIWLVEAWD---ADHVIAFEKHHFNVIE 246 (261)
T ss_dssp HHHHHHHHT---CEEEEETTCCTTTTTG
T ss_pred HHHHHHHhC---CCceEeCCCCchhHHH
Confidence 667888776 6788999999976553
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.52 E-value=1.8e-13 Score=117.35 Aligned_cols=128 Identities=10% Similarity=0.033 Sum_probs=89.6
Q ss_pred ceeec-CCceeEEEEccC---CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCC
Q 018947 23 NLIKT-SHGSLSVTIYGD---QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEP 98 (348)
Q Consensus 23 ~~v~~-~~~~l~~~~~g~---~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 98 (348)
..|.. +|.+|....+-+ ..-|+||+.||++......... .......++++||.|+++|.||+|.|.... ..
T Consensus 8 v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~--~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~---~~ 82 (347)
T d1ju3a2 8 VMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWST--QSTNWLEFVRDGYAVVIQDTRGLFASEGEF---VP 82 (347)
T ss_dssp EEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHT--TSCCTHHHHHTTCEEEEEECTTSTTCCSCC---CT
T ss_pred eEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCc--ccHHHHHHHHCCCEEEEEeeCCccccCCcc---cc
Confidence 45665 566787766532 3447899999986532211110 111225677899999999999999998542 22
Q ss_pred CCCHHHHHHHHHHHHHHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 99 VLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 99 ~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
....++-..|+.+++..... .+|.++|+|+||.+++.+|+..|..+++++...+...
T Consensus 83 ~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 83 HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred ccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 33444455666666665543 5899999999999999999999999999999887664
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.49 E-value=7.1e-14 Score=120.19 Aligned_cols=252 Identities=12% Similarity=0.043 Sum_probs=130.7
Q ss_pred ccceeec-CCceeEEEEc---c-CCCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIY---G-DQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~---g-~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 95 (348)
++..+.+ +|..+....+ + ++..|+||++||.|....+..... +......+...|+.|+.+|+|..+.... .
T Consensus 80 ~~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~-~~~~~~~la~~g~~VvsvdYRla~~~~p---e 155 (358)
T d1jkma_ 80 STETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRV-HRRWCTDLAAAGSVVVMVDFRNAWTAEG---H 155 (358)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHH-HHHHHHHHHHTTCEEEEEECCCSEETTE---E
T ss_pred EEEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccc-cchHHHHHHhhhheeeeeeecccccccc---c
Confidence 3344444 5656766554 2 123468999999765321111000 1122345667899999999998643221 1
Q ss_pred CCCCCCHHHHHHHHHHHH---HHcCCCceeEEEeChhHHHHHHHHHh-----CCCCcceEEEecCCCCCCChH-HHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVL---NHFGLGAVMCMGVTAGAYILTLFAMK-----YRHRVLGLILVSPLCKAPSWT-EWLYNK 166 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l---~~l~~~~v~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~~~~~~~-~~~~~~ 166 (348)
......++|..+.+..+. ..++.+++.++|+|.||.+++.++.. ....+.++++..+........ ......
T Consensus 156 ~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 235 (358)
T d1jkma_ 156 HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLT 235 (358)
T ss_dssp CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccCccchhhcc
Confidence 112234555554444444 34667899999999999999877653 234578888888876643211 111000
Q ss_pred HHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEE
Q 018947 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 246 (348)
.........+.. . .......+................... ......+. --.|++
T Consensus 236 ~~~~~~~~~~~~--~--------------------~~~~~~~~~~~~~~~~~~~~~p~~~~~---~a~~~~~~-~lPp~l 289 (358)
T d1jkma_ 236 ELPSLVENDGYF--I--------------------ENGGMALLVRAYDPTGEHAEDPIAWPY---FASEDELR-GLPPFV 289 (358)
T ss_dssp HCTHHHHTTTSS--S--------------------CHHHHHHHHHHHSSSSTTTTCTTTCGG---GCCHHHHT-TCCCEE
T ss_pred cccchhcccccc--c--------------------chhhhhhHHhhcCCccCCccCcccccc---ccchhhcc-CCCCEE
Confidence 000000000000 0 111111111111000000000000000 00001111 124899
Q ss_pred EEecCCCCCCchHHHHHHhhccCC--cEEEEecCCCCCccc-------cChhhhHHHHHHHHhhc
Q 018947 247 IFVGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTE-------EQPHAMLIPMEYFLMGY 302 (348)
Q Consensus 247 ~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-------e~p~~~~~~i~~fl~~~ 302 (348)
+++|+.|.+.+....+++++...+ ++++++++.+|.... +..+++.+.|..|+...
T Consensus 290 i~~g~~D~l~~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~ 354 (358)
T d1jkma_ 290 VAVNELDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 354 (358)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHH
Confidence 999999988777777777776644 789999999995321 12345677888898764
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.45 E-value=1.7e-13 Score=115.56 Aligned_cols=233 Identities=15% Similarity=0.127 Sum_probs=125.6
Q ss_pred cceeecCCceeEEEEccC-CCCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 22 DNLIKTSHGSLSVTIYGD-QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 22 ~~~v~~~~~~l~~~~~g~-~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
...+...++.+.+..+.+ ++.|+||++||.|....+... .......+++ .|+.|+.+|+|...+.. ..
T Consensus 58 ~~~i~~~~g~i~~~iy~P~~~~P~il~iHGGg~~~g~~~~---~~~~~~~l~~~~g~~Vv~v~Yrlap~~~-------~p 127 (311)
T d1jjia_ 58 DRTIKGRNGDIRVRVYQQKPDSPVLVYYHGGGFVICSIES---HDALCRRIARLSNSTVVSVDYRLAPEHK-------FP 127 (311)
T ss_dssp EEEEEETTEEEEEEEEESSSSEEEEEEECCSTTTSCCTGG---GHHHHHHHHHHHTSEEEEEECCCTTTSC-------TT
T ss_pred EEEEeCCCCcEEEEEEcCCCCceEEEEEcCCCCccCChhh---hhhhhhhhhhcCCcEEEEeccccccccc-------cc
Confidence 355666777777776643 456899999997643221111 1112234444 49999999999753321 22
Q ss_pred CCHHHHHHHHHHHH---HHcCC--CceeEEEeChhHHHHHHHHHhC----CCCcceEEEecCCCCCCChHHHHHHHHHHH
Q 018947 100 LSVDDLADQIAEVL---NHFGL--GAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCKAPSWTEWLYNKVMSN 170 (348)
Q Consensus 100 ~~~~~~~~dl~~~l---~~l~~--~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 170 (348)
..+++..+.+..+. +.+++ +++.++|+|.||.+++.++... .....+.+++.+.............
T Consensus 128 ~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~----- 202 (311)
T d1jjia_ 128 AAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLE----- 202 (311)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHH-----
T ss_pred hhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCcccccc-----
Confidence 33444444443333 33443 5799999999999888776532 3357888888887764332111100
Q ss_pred HHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEec
Q 018947 171 LLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVG 250 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 250 (348)
........ .................. .. ...........+...|+++++|
T Consensus 203 ---~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~-~~------~~~~sp~~~~~~~~pP~li~~g 252 (311)
T d1jjia_ 203 ---FGEGLWIL--------------------DQKIMSWFSEQYFSREED-KF------NPLASVIFADLENLPPALIITA 252 (311)
T ss_dssp ---TSSSCSSC--------------------CHHHHHHHHHHHCSSGGG-GG------CTTTSGGGSCCTTCCCEEEEEE
T ss_pred ---cccccccc--------------------cHHHhhhhhhhccccccc-cc------ccccchhhcccccCCCEEEEEc
Confidence 00000000 111111111111000000 00 0000000001122368999999
Q ss_pred CCCCCCchHHHHHHhhccCC--cEEEEecCCCCCccc-----cChhhhHHHHHHHH
Q 018947 251 ESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTE-----EQPHAMLIPMEYFL 299 (348)
Q Consensus 251 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl 299 (348)
+.|.+++....+++++...+ ++++++++++|.... +...+..+.|.+||
T Consensus 253 ~~D~l~d~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 253 EYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp EECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 99988777777777776543 789999999995432 22345666777776
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.45 E-value=8.4e-13 Score=105.27 Aligned_cols=178 Identities=12% Similarity=0.122 Sum_probs=103.0
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhc--cCCeEEEEeCCCCC------C---CCCCC--CCCCCCCCCHHHH-
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL--LHNFCIYHINPPGH------E---FGAAA--ISDDEPVLSVDDL- 105 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~--~~g~~vi~~D~~G~------G---~S~~~--~~~~~~~~~~~~~- 105 (348)
+.+++||++||+|++...+.... ..+. -.++.+++++-|.. | .+... ..........++.
T Consensus 12 ~~~~~Vi~lHG~G~~~~~~~~~~------~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 85 (218)
T d1auoa_ 12 PADACVIWLHGLGADRYDFMPVA------EALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELE 85 (218)
T ss_dssp CCSEEEEEECCTTCCTTTTHHHH------HHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHH
T ss_pred CCCeEEEEEcCCCCChhhHHHHH------HHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHH
Confidence 35668999999999887643211 1221 23567777664411 0 00000 0000112233322
Q ss_pred --HHHHHHHHH---Hc--CCCceeEEEeChhHHHHHHHHHh-CCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHhhcc
Q 018947 106 --ADQIAEVLN---HF--GLGAVMCMGVTAGAYILTLFAMK-YRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGM 177 (348)
Q Consensus 106 --~~dl~~~l~---~l--~~~~v~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
...+.++++ .. +.++++++|+|+||++++.++.. .+..+.+++.++.......
T Consensus 86 ~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~------------------- 146 (218)
T d1auoa_ 86 VSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFG------------------- 146 (218)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCC-------------------
T ss_pred HHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccc-------------------
Confidence 233344433 33 34789999999999999988764 5667899998875322100
Q ss_pred chhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCCCCc
Q 018947 178 CGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSPFHS 257 (348)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~ 257 (348)
.... .. ....+.|+++++|++|.+++
T Consensus 147 --------------~~~~------~~----------------------------------~~~~~~pvl~~hG~~D~vvp 172 (218)
T d1auoa_ 147 --------------DELE------LS----------------------------------ASQQRIPALCLHGQYDDVVQ 172 (218)
T ss_dssp --------------TTCC------CC----------------------------------HHHHTCCEEEEEETTCSSSC
T ss_pred --------------cccc------cc----------------------------------hhccCCCEEEEecCCCCccC
Confidence 0000 00 00124699999999999993
Q ss_pred --hHHHHHHhhccCC--cEEEEecCCCCCccccChhhhHHHHHHHHhh
Q 018947 258 --EAVHMTSKIDRRY--SALVEVQACGSMVTEEQPHAMLIPMEYFLMG 301 (348)
Q Consensus 258 --~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 301 (348)
..+++.+.+...+ .++++++ +||... ++..+.+.+||++
T Consensus 173 ~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~----~~~~~~i~~wl~~ 215 (218)
T d1auoa_ 173 NAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL----PQEIHDIGAWLAA 215 (218)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEES-CSSSCC----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEC-CCCccC----HHHHHHHHHHHHH
Confidence 4556667666533 6888886 899654 3345678888865
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.39 E-value=8.9e-11 Score=102.17 Aligned_cols=82 Identities=10% Similarity=0.008 Sum_probs=65.4
Q ss_pred hhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC--------------------CceeEEEeCh
Q 018947 69 CSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGL--------------------GAVMCMGVTA 128 (348)
Q Consensus 69 ~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~--------------------~~v~lvGhS~ 128 (348)
..++.+||.|+.+|.||.|.|+.. ....+.++ ++|..++++.+.. .+|.++|+|+
T Consensus 130 ~~~~~~GYavv~~D~RG~g~S~G~----~~~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY 204 (405)
T d1lnsa3 130 DYFLTRGFASIYVAGVGTRSSDGF----QTSGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSY 204 (405)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSC----CCTTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETH
T ss_pred HHHHhCCCEEEEECCCCCCCCCCc----cccCChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCH
Confidence 457789999999999999999754 22344444 5677777776642 3799999999
Q ss_pred hHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 129 GAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 129 Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
||.+.+.+|...|..++++|..++...
T Consensus 205 ~G~~q~~aA~~~pp~LkAivp~~~~~d 231 (405)
T d1lnsa3 205 LGTMAYGAATTGVEGLELILAEAGISS 231 (405)
T ss_dssp HHHHHHHHHTTTCTTEEEEEEESCCSB
T ss_pred HHHHHHHHHhcCCccceEEEecCcccc
Confidence 999999999999999999999887664
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.37 E-value=3e-12 Score=104.61 Aligned_cols=185 Identities=10% Similarity=0.004 Sum_probs=107.5
Q ss_pred CCceeEEEEccC------CCCCeEEEeCCCCCChhhhccccccchhhh-hhcc----CCeEEEEeCCCCCCCCCCCCCCC
Q 018947 28 SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEAC-SLLL----HNFCIYHINPPGHEFGAAAISDD 96 (348)
Q Consensus 28 ~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~-~~~~----~g~~vi~~D~~G~G~S~~~~~~~ 96 (348)
.+....|.++-+ ..-|+|+++||.+++...+........... .... ..+.+...+.... ... ...
T Consensus 32 ~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~ 107 (255)
T d1jjfa_ 32 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAA---GPG-IAD 107 (255)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCC---CTT-CSC
T ss_pred CCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccc---ccc-ccc
Confidence 455666666521 234799999999988776633221111111 1111 1233333332221 110 100
Q ss_pred CCCCCHHHHHHHHHHHHHHc-----CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHH
Q 018947 97 EPVLSVDDLADQIAEVLNHF-----GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNL 171 (348)
Q Consensus 97 ~~~~~~~~~~~dl~~~l~~l-----~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 171 (348)
......+.+++++...++.. +.+++.++|+|+||..++.++.++|+++++++.+++.........
T Consensus 108 ~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~~---------- 177 (255)
T d1jjfa_ 108 GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNER---------- 177 (255)
T ss_dssp HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHHH----------
T ss_pred cccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCccccc----------
Confidence 11112334445555555432 235699999999999999999999999999999887654321100
Q ss_pred HHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecC
Q 018947 172 LYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGE 251 (348)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 251 (348)
. .. +..........|+++.+|+
T Consensus 178 -----------------~-~~----------------------------------------~~~~~~~~~~~~~~i~~G~ 199 (255)
T d1jjfa_ 178 -----------------L-FP----------------------------------------DGGKAAREKLKLLFIACGT 199 (255)
T ss_dssp -----------------H-CT----------------------------------------TTTHHHHHHCSEEEEEEET
T ss_pred -----------------c-cc----------------------------------------cHHHHhhccCCcceEEeCC
Confidence 0 00 0000111234689999999
Q ss_pred CCCCCchHHHHHHhhccCC--cEEEEecCCCCCcc
Q 018947 252 SSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVT 284 (348)
Q Consensus 252 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~ 284 (348)
+|..++..+.+++.+...+ .++.+++++||...
T Consensus 200 ~D~~~~~~~~~~~~L~~~g~~~~~~~~~~ggH~~~ 234 (255)
T d1jjfa_ 200 NDSLIGFGQRVHEYCVANNINHVYWLIQGGGHDFN 234 (255)
T ss_dssp TCTTHHHHHHHHHHHHHTTCCCEEEEETTCCSSHH
T ss_pred CCCCchHHHHHHHHHHHCCCCEEEEEECCCCcCHH
Confidence 9998877777777776543 78889999999644
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.35 E-value=9.5e-11 Score=101.13 Aligned_cols=135 Identities=12% Similarity=0.091 Sum_probs=86.2
Q ss_pred ccceeec-CCceeEEEEc---cCCCCCeEEEeCCCCCChhhhcccc-----ccchhhhhhccCCeEEEEeCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIY---GDQDKPALVTYPDLALNYMSCFQGL-----FFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~---g~~~~p~vvllHG~~~~~~~~~~~~-----~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 91 (348)
++..|.. +|.+|...++ +...-|+||+.|+++.+........ ........++.+||.|+.+|.||+|.|+.
T Consensus 25 ~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 104 (381)
T d1mpxa2 25 REVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 104 (381)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCC
Confidence 4556666 4557776654 3345578999998865432211100 01122345778999999999999999875
Q ss_pred CCCCCC---------CCCCHHHHHHHHHHHHHHcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 92 AISDDE---------PVLSVDDLADQIAEVLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 92 ~~~~~~---------~~~~~~~~~~dl~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
...... .....+|..+.+..+.++.. ..+|.++|+|+||.+++.+|...|..++++|...+...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 105 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred ceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 421110 01123333333332333322 35899999999999999999999999999999887765
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.34 E-value=3.6e-12 Score=107.60 Aligned_cols=90 Identities=12% Similarity=0.050 Sum_probs=54.3
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHc
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEV---LNHF 116 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~---l~~l 116 (348)
..|+||++||.|....+... .......++. .||.|+.+|+|...+.. ....+++..+.+..+ .+.+
T Consensus 77 ~~Pvvv~iHGGG~~~g~~~~---~~~~~~~la~~~G~~V~~vdYrl~pe~~-------~~~~~~d~~~~~~~~~~~~~~~ 146 (317)
T d1lzla_ 77 PVPVLLWIHGGGFAIGTAES---SDPFCVEVARELGFAVANVEYRLAPETT-------FPGPVNDCYAALLYIHAHAEEL 146 (317)
T ss_dssp CEEEEEEECCSTTTSCCGGG---GHHHHHHHHHHHCCEEEEECCCCTTTSC-------TTHHHHHHHHHHHHHHHTHHHH
T ss_pred CCcEEEEecCcccccccccc---cchHHHhHHhhcCCcccccccccccccc-------ccccccccccchhHHHHHHHHh
Confidence 34689999996532111110 1122234444 49999999999875432 112334443333333 3444
Q ss_pred CC--CceeEEEeChhHHHHHHHHHhC
Q 018947 117 GL--GAVMCMGVTAGAYILTLFAMKY 140 (348)
Q Consensus 117 ~~--~~v~lvGhS~Gg~ia~~~a~~~ 140 (348)
++ ++|+++|+|.||.+++.++.+.
T Consensus 147 g~D~~rI~l~G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 147 GIDPSRIAVGGQSAGGGLAAGTVLKA 172 (317)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHHH
T ss_pred CCCHHHEEEEEeccccHHHHHHHhhh
Confidence 44 5799999999999999887653
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.27 E-value=2.1e-11 Score=102.42 Aligned_cols=239 Identities=10% Similarity=-0.002 Sum_probs=122.9
Q ss_pred ccceeecCCceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhhhhccC-CeEEEEeCCCCCCCCCCCCCC
Q 018947 21 KDNLIKTSHGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLH-NFCIYHINPPGHEFGAAAISD 95 (348)
Q Consensus 21 ~~~~v~~~~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~ 95 (348)
++..++.+|..+....+-+ +..|+||++||.+....+... +......++.+ ++.|+.+|+|......
T Consensus 47 ~~~~~~~~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~~---~~~~~~~~a~~~~~~v~~v~Yrl~p~~~----- 118 (308)
T d1u4na_ 47 REFDMDLPGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLET---HDPVCRVLAKDGRAVVFSVDYRLAPEHK----- 118 (308)
T ss_dssp EEEEEEETTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTT---THHHHHHHHHHHTSEEEEECCCCTTTSC-----
T ss_pred EEEEEecCCceEEEEEEeccccCCCCCEEEEEecCeeeeecccc---ccchhhhhhhcccccccccccccccccc-----
Confidence 3455566777776655422 234699999997532211111 11222344444 5678899998764321
Q ss_pred CCCCCCHHHHHHHHHHHHHH---cC--CCceeEEEeChhHHHHHHHHHhCC----CCcceEEEecCCCCCCChHHHHHHH
Q 018947 96 DEPVLSVDDLADQIAEVLNH---FG--LGAVMCMGVTAGAYILTLFAMKYR----HRVLGLILVSPLCKAPSWTEWLYNK 166 (348)
Q Consensus 96 ~~~~~~~~~~~~dl~~~l~~---l~--~~~v~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~ 166 (348)
.....+|..+.+..+.+. ++ .++++++|+|.||.+++.++.... ..+.+..++.+..............
T Consensus 119 --~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (308)
T d1u4na_ 119 --FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIE 196 (308)
T ss_dssp --TTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHHH
T ss_pred --cccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccchhh
Confidence 223444544444444432 22 357999999999999988776443 3467777777765532211100000
Q ss_pred HHHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEE
Q 018947 167 VMSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSL 246 (348)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 246 (348)
. ....... ...................... . ......... .-..|++
T Consensus 197 ~------~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~----~-~s~~~~~d~-~~~Pp~l 243 (308)
T d1u4na_ 197 E------NAEGYLL---------------------TGGMSLWFLDQYLNSLEELTHP----W-FSPVLYPDL-SGLPPAY 243 (308)
T ss_dssp H------TSSSSSS---------------------CHHHHHHHHHHHCSSGGGGGCT----T-TCGGGCSCC-TTCCCEE
T ss_pred h------ccccccc---------------------cchhhhhhhhcccCccccccch----h-hhhhhchhh-cCCCCee
Confidence 0 0000000 0111100000000000000000 0 000000000 1124899
Q ss_pred EEecCCCCCCchHHHHHHhhccCC--cEEEEecCCCCCccc-c----ChhhhHHHHHHHHhhc
Q 018947 247 IFVGESSPFHSEAVHMTSKIDRRY--SALVEVQACGSMVTE-E----QPHAMLIPMEYFLMGY 302 (348)
Q Consensus 247 ~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-e----~p~~~~~~i~~fl~~~ 302 (348)
+++|+.|.+++....+.+++...+ ++++++++++|.... . ..++..+.+.+||++.
T Consensus 244 i~~g~~D~l~~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~ 306 (308)
T d1u4na_ 244 IATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 306 (308)
T ss_dssp EEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHH
T ss_pred EEecCcCCchHHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 999999988777777777776543 789999999995432 1 2246677788888763
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.27 E-value=6.8e-10 Score=90.87 Aligned_cols=124 Identities=11% Similarity=0.049 Sum_probs=83.0
Q ss_pred CCceeEEEEccCCCCCeEEEeCCCCC--ChhhhccccccchhhhhhccCCeEEEEeCCCCCC-CCCCCCCCCCCCCCHHH
Q 018947 28 SHGSLSVTIYGDQDKPALVTYPDLAL--NYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHE-FGAAAISDDEPVLSVDD 104 (348)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vvllHG~~~--~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G-~S~~~~~~~~~~~~~~~ 104 (348)
.+..+.+...+ +..|+|+|+||.++ +...|.... .........++.|+.+|--..+ .++.+ ......+++
T Consensus 14 ~~r~~~~~v~~-~~~pvlylLhG~~g~~~~~~w~~~~---~~~~~~~~~~~iVV~p~g~~~~~y~~~~---~~~~~~~~t 86 (267)
T d1r88a_ 14 MGRDIPVAFLA-GGPHAVYLLDAFNAGPDVSNWVTAG---NAMNTLAGKGISVVAPAGGAYSMYTNWE---QDGSKQWDT 86 (267)
T ss_dssp TTEEEEEEEEC-CSSSEEEEECCSSCCSSSCHHHHTS---CHHHHHTTSSSEEEEECCCTTSTTSBCS---SCTTCBHHH
T ss_pred CCceeeEEEEC-CCCCEEEEcCCCCCCCCcchhhhcc---HHHHHHhhCCeEEEEECCCCCcCCcccc---ccccccHHH
Confidence 34457666655 45599999999755 344553322 2224455678999999852221 12211 112234544
Q ss_pred -HHHHHHHHHH-HcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCC
Q 018947 105 -LADQIAEVLN-HFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPS 158 (348)
Q Consensus 105 -~~~dl~~~l~-~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 158 (348)
+.++|..+++ .++ .+++.+.|+||||..|+.+|.++|+++++++.+++......
T Consensus 87 fl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~~ 144 (267)
T d1r88a_ 87 FLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSN 144 (267)
T ss_dssp HHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTS
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCCC
Confidence 4557777774 333 36789999999999999999999999999999998877544
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.18 E-value=7.5e-10 Score=91.71 Aligned_cols=127 Identities=12% Similarity=0.008 Sum_probs=82.7
Q ss_pred CCceeEEEEc-cCCCCCeEEEeCCCCCCh--hhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCCCCC-----CCC
Q 018947 28 SHGSLSVTIY-GDQDKPALVTYPDLALNY--MSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDD-----EPV 99 (348)
Q Consensus 28 ~~~~l~~~~~-g~~~~p~vvllHG~~~~~--~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~-----~~~ 99 (348)
.+..+.+.+. +....|+|+++||.+++. ..|.... .....+...++.|++++..+.+......... ...
T Consensus 19 ~~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (288)
T d1sfra_ 19 MGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINT---PAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQT 95 (288)
T ss_dssp TTEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHC---CHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEEC
T ss_pred CCcEEEEEEeCCCCCceEEEEcCCCCCCCcchhhhhhc---cHHHHHHhCCCEEEEeccCCCCCCccccCcccccccccc
Confidence 4556666554 556779999999987642 3332111 1113344568999999987765433211100 011
Q ss_pred CCHH-HHHHHHHHHHH-HcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 100 LSVD-DLADQIAEVLN-HFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 100 ~~~~-~~~~dl~~~l~-~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
...+ .+++++...++ +++ .+++.++|+|+||..|+.++.++|+++.+++.+++.....
T Consensus 96 ~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~~ 157 (288)
T d1sfra_ 96 YKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (288)
T ss_dssp CBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred hhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccccc
Confidence 2233 34566666653 344 3579999999999999999999999999999999877643
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.16 E-value=1.1e-09 Score=94.60 Aligned_cols=134 Identities=10% Similarity=0.031 Sum_probs=84.0
Q ss_pred cceeec-CCceeEEEEc---cCCCCCeEEEeCCCCCChhhh------ccccccchhhhhhccCCeEEEEeCCCCCCCCCC
Q 018947 22 DNLIKT-SHGSLSVTIY---GDQDKPALVTYPDLALNYMSC------FQGLFFCPEACSLLLHNFCIYHINPPGHEFGAA 91 (348)
Q Consensus 22 ~~~v~~-~~~~l~~~~~---g~~~~p~vvllHG~~~~~~~~------~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 91 (348)
...|.. +|.+|+..++ +...-|+||+.|+++..+... ............++.+||.|+.+|.||+|.|..
T Consensus 30 ~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 109 (385)
T d2b9va2 30 EVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQG 109 (385)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCC
Confidence 445666 5667877665 334557888888765322110 000001123346778999999999999999875
Q ss_pred CCCCCC---------CCCCHHHHHHHHHHHHHHcCC--CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCC
Q 018947 92 AISDDE---------PVLSVDDLADQIAEVLNHFGL--GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCK 155 (348)
Q Consensus 92 ~~~~~~---------~~~~~~~~~~dl~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 155 (348)
...... .....+|..+.+..+.++... .+|.++|+|+||.+++.+|...|..+++++...+...
T Consensus 110 ~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 110 DYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred ceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 422110 011234444433333333222 5799999999999999999999999999998876654
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.15 E-value=9.9e-10 Score=90.57 Aligned_cols=126 Identities=10% Similarity=0.052 Sum_probs=82.1
Q ss_pred CCceeEEEEccCCCCCeEEEeCCCCC--ChhhhccccccchhhhhhccCCeEEEEeCCCCCCC-CCC--C--CCCCCCCC
Q 018947 28 SHGSLSVTIYGDQDKPALVTYPDLAL--NYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEF-GAA--A--ISDDEPVL 100 (348)
Q Consensus 28 ~~~~l~~~~~g~~~~p~vvllHG~~~--~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~-S~~--~--~~~~~~~~ 100 (348)
.+..+.+...+ .+.|+|+|+||.++ +...|.... .....+...++.|+.+|-...+. +.. + ........
T Consensus 16 ~~r~i~~~~~~-~~~p~lyllhG~~g~~d~~~W~~~~---~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~ 91 (280)
T d1dqza_ 16 MGRDIKVQFQG-GGPHAVYLLDGLRAQDDYNGWDINT---PAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTY 91 (280)
T ss_dssp TTEEEEEEEEC-CSSSEEEECCCTTCCSSSCHHHHHS---CHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCC
T ss_pred CCCcceEEeeC-CCCCEEEECCCCCCCCccchhhhcc---hHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcch
Confidence 34556665554 46699999999865 344553211 12234556799999999533221 110 0 00111223
Q ss_pred CHHH-HHHHHHHHHHH-c--CCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCC
Q 018947 101 SVDD-LADQIAEVLNH-F--GLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 101 ~~~~-~~~dl~~~l~~-l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 157 (348)
.+++ ++++|...+++ + +.+++.+.|+||||..|+.+|.++|+++++++.+++.....
T Consensus 92 ~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~ 152 (280)
T d1dqza_ 92 KWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp BHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCcc
Confidence 4444 46777777754 2 44578999999999999999999999999999999877643
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.07 E-value=1.2e-09 Score=89.71 Aligned_cols=240 Identities=7% Similarity=-0.035 Sum_probs=119.0
Q ss_pred ccceeec-CCceeEEEEccC------CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCCCCCCCCC
Q 018947 21 KDNLIKT-SHGSLSVTIYGD------QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAI 93 (348)
Q Consensus 21 ~~~~v~~-~~~~l~~~~~g~------~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 93 (348)
++....+ +|.+|+...+-+ +..|+||++||.+.......... .........++.+...+.++........
T Consensus 8 e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (280)
T d1qfma2 8 VQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSV---SRLIFVRHMGGVLAVANIRGGGEYGETW 84 (280)
T ss_dssp EEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCH---HHHHHHHHHCCEEEEECCTTSSTTHHHH
T ss_pred EEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcch---hhhhhhcccceeeeccccccccccchhh
Confidence 3344454 566776665422 24589999999654433221111 1112333456777777777654311100
Q ss_pred CCCCCCCCHHHHHHHHHH----HHHHcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHH
Q 018947 94 SDDEPVLSVDDLADQIAE----VLNHFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 167 (348)
Q Consensus 94 ~~~~~~~~~~~~~~dl~~----~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 167 (348)
.............++... ...... .....++|+|.||..+...+...++.+.+++...+...........
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 160 (280)
T d1qfma2 85 HKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT---- 160 (280)
T ss_dssp HHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST----
T ss_pred hhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhcccc----
Confidence 000111111222222222 222222 2467899999999999999999999888888877766542211100
Q ss_pred HHHHHHhhccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEE
Q 018947 168 MSNLLYYYGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLI 247 (348)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 247 (348)
..... .... .... .......... .... ..............|+|+
T Consensus 161 ---------~~~~~----~~~~-~~~~-------~~~~~~~~~~-------------~~~~-~~~s~~~~~~~~~pP~Li 205 (280)
T d1qfma2 161 ---------IGHAW----TTDY-GCSD-------SKQHFEWLIK-------------YSPL-HNVKLPEADDIQYPSMLL 205 (280)
T ss_dssp ---------TGGGG----HHHH-CCTT-------SHHHHHHHHH-------------HCGG-GCCCCCSSTTCCCCEEEE
T ss_pred ---------ccccc----eecc-cCCC-------cccccccccc-------------cccc-cccchhhhcccCCCceEE
Confidence 00000 0000 0000 0000000000 0000 001111112223348999
Q ss_pred EecCCCCCCc--hHHHHHHhhc---------cCCcEEEEecCCCCCccccChh--hhHHHHHHHHhhc
Q 018947 248 FVGESSPFHS--EAVHMTSKID---------RRYSALVEVQACGSMVTEEQPH--AMLIPMEYFLMGY 302 (348)
Q Consensus 248 i~g~~D~~~~--~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~e~p~--~~~~~i~~fl~~~ 302 (348)
++|++|..++ .+.++.+.+. +..+++++++++||...-...+ +....+.+||++.
T Consensus 206 ihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~ 273 (280)
T d1qfma2 206 LTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARC 273 (280)
T ss_dssp EEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence 9999999994 5556666663 2236899999999965432222 2234567888775
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.02 E-value=8.8e-11 Score=95.16 Aligned_cols=105 Identities=12% Similarity=0.150 Sum_probs=72.4
Q ss_pred eEEEeCCCCCChhhhccccccchhhhhhc---cCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc--CC
Q 018947 44 ALVTYPDLALNYMSCFQGLFFCPEACSLL---LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHF--GL 118 (348)
Q Consensus 44 ~vvllHG~~~~~~~~~~~~~~~~~~~~~~---~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l--~~ 118 (348)
||||+||++++...+.. + ..+...+ ..|+.|++++......++.. ......+.+.++.+.+.++.. +.
T Consensus 7 PVVLvHGlg~s~~~~~~---m-~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~---~~~~~~~~~~~e~v~~~I~~~~~~~ 79 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLS---M-GAIKKMVEKKIPGIHVLSLEIGKTLREDVE---NSFFLNVNSQVTTVCQILAKDPKLQ 79 (279)
T ss_dssp CEEEECCTTCCSCCTTT---T-HHHHHHHHHHSTTCCEEECCCSSSHHHHHH---HHHHSCHHHHHHHHHHHHHSCGGGT
T ss_pred cEEEECCCCCCCCChHH---H-HHHHHHHHHHCCCeEEEEEEcCCCcccccc---cchhhhHHHHHHHHHHHHHhccccc
Confidence 89999999987543211 1 1112232 34899999998654332110 001235778888888777643 33
Q ss_pred CceeEEEeChhHHHHHHHHHhCCC-CcceEEEecCCCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRH-RVLGLILVSPLCK 155 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 155 (348)
+++++|||||||.++..++.++++ .|..+|.++++..
T Consensus 80 ~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~ 117 (279)
T d1ei9a_ 80 QGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred cceeEEEEccccHHHHHHHHHcCCCCcceEEEECCCCC
Confidence 689999999999999999999876 5999999997764
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.93 E-value=2.3e-09 Score=86.53 Aligned_cols=186 Identities=11% Similarity=0.042 Sum_probs=102.9
Q ss_pred CceeEEEEc-----cCCCCCeEEEeCCCCCChhhhccccccchhhhhhccCC----eEEEEeCCCCCCCCCCCCCCCCCC
Q 018947 29 HGSLSVTIY-----GDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHN----FCIYHINPPGHEFGAAAISDDEPV 99 (348)
Q Consensus 29 ~~~l~~~~~-----g~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g----~~vi~~D~~G~G~S~~~~~~~~~~ 99 (348)
++...+.++ .+...|+||++||.+.... ......+..+...+ +.++.++....+.-... .....
T Consensus 26 g~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~-----~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~--~~~~~ 98 (246)
T d3c8da2 26 KNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQS-----MPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHE--LPCNA 98 (246)
T ss_dssp TEEEEEEEEEC-----CCCCEEEESSHHHHHHT-----SCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHH--SSSCH
T ss_pred CCEEEEEEEECCCCCCCCCCEEEEeCCcchhcc-----CcHHHHHHHHHHhCCCCceEEeecccccccccccc--cCccH
Confidence 555555554 2245589999998432211 11112234444444 33455543322110000 00011
Q ss_pred CCHHHHHHHHHHHHHHc-C----CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCCCChHHHHHHHHHHHHHHh
Q 018947 100 LSVDDLADQIAEVLNHF-G----LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYY 174 (348)
Q Consensus 100 ~~~~~~~~dl~~~l~~l-~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (348)
.-.+.+.+++..+++.. . .+++.++|+|+||..++.++.++|+++++++.+++........
T Consensus 99 ~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~-------------- 164 (246)
T d3c8da2 99 DFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG-------------- 164 (246)
T ss_dssp HHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT--------------
T ss_pred HHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCC--------------
Confidence 11233445555555442 2 2568999999999999999999999999999999865421100
Q ss_pred hccchhHHHHHHHhhhcccccCCCCCCChHHHHHHHHHHhhhchhhHHHHHHHHcCCccHHhhhccCCccEEEEecCCCC
Q 018947 175 YGMCGVVKELLLKRYFSKEVRGNAQVPESDIVQACRRLLDERQSSNVWHFLEAINGRPDISEGLRKLQCRSLIFVGESSP 254 (348)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 254 (348)
... .....+.. ..........|+++.+|+.|.
T Consensus 165 -----------------~~~-------~~~~~~~~------------------------~~~~~~~~~~~~~l~~G~~D~ 196 (246)
T d3c8da2 165 -----------------GQQ-------EGVLLEKL------------------------KAGEVSAEGLRIVLEAGIREP 196 (246)
T ss_dssp -----------------SSS-------CCHHHHHH------------------------HTTSSCCCSCEEEEEEESSCH
T ss_pred -----------------ccc-------hHHHHHHh------------------------hhhhhhccCCCeEEEecCCCc
Confidence 000 00000000 011123456789999999998
Q ss_pred CC-chHHHHHHhhccCC--cEEEEecCCCCCcc
Q 018947 255 FH-SEAVHMTSKIDRRY--SALVEVQACGSMVT 284 (348)
Q Consensus 255 ~~-~~~~~~~~~~~~~~--~~~~~~~~~gH~~~ 284 (348)
.+ ...+.+++.+...+ .+++++++ ||...
T Consensus 197 ~~~~~~~~l~~~L~~~g~~~~~~~~~G-gH~~~ 228 (246)
T d3c8da2 197 MIMRANQALYAQLHPIKESIFWRQVDG-GHDAL 228 (246)
T ss_dssp HHHHHHHHHHHHTGGGTTSEEEEEESC-CSCHH
T ss_pred chhHHHHHHHHHHHHCCCCEEEEEeCC-CCChH
Confidence 65 56667888877644 67788875 89443
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.90 E-value=2.6e-10 Score=94.60 Aligned_cols=108 Identities=11% Similarity=0.050 Sum_probs=70.3
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----H
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVL----N 114 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l----~ 114 (348)
+.+|++|++||+..+....+.. .....++. .+++||++|+... +... -...........+.+..++ +
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~----~~~~a~l~~~d~NVI~VDW~~~--a~~~--Y~~a~~n~~~Vg~~ia~~i~~l~~ 139 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLL----DMCKNMFKVEEVNCICVDWKKG--SQTS--YTQAANNVRVVGAQVAQMLSMLSA 139 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHH----HHHHHHTTTCCEEEEEEECHHH--HSSC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcCCCCcchHH----HHHHHHHhcCCceEEEEeeccc--cCcc--hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999998877553211 12234444 4699999999753 2100 0001112333444444444 3
Q ss_pred HcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 115 HFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 115 ~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
..+ .++++|||||+||.+|- +|.++..++.+++.++|+...
T Consensus 140 ~~g~~~~~vhlIGhSLGAhvAG-~aG~~~~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 140 NYSYSPSQVQLIGHSLGAHVAG-EAGSRTPGLGRITGLDPVEAS 182 (337)
T ss_dssp HHCCCGGGEEEEEETHHHHHHH-HHHHTSTTCCEEEEESCCCTT
T ss_pred hcCCChhheEEEeecHHHhhhH-HHHHhhccccceeccCCCccc
Confidence 434 47899999999999997 666666789999999988764
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.85 E-value=1.1e-09 Score=90.68 Aligned_cols=109 Identities=9% Similarity=0.040 Sum_probs=73.5
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhc-cCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLL-LHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLN---- 114 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~-~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~---- 114 (348)
+.+|+++++||+..+....+.. .....++ ..+++||++|+... +... -...........+.+..+++
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~----~~~~a~l~~~d~NVi~VDW~~~--a~~~--Y~~a~~n~~~Vg~~ia~~i~~l~~ 139 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLL----DMCKKMFQVEKVNCICVDWRRG--SRTE--YTQASYNTRVVGAEIAFLVQVLST 139 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHH----HHHHHHHTTCCEEEEEEECHHH--HSSC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCcccCCCCcccHH----HHHHHHHhcCCceEEEEechhh--cccc--hHHHHHhHHHHHHHHHHHHHHHHH
Confidence 5689999999998876553211 1223444 45799999999764 2210 00011233444444555543
Q ss_pred HcC--CCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 115 HFG--LGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 115 ~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
..+ .++++|||||+||.+|-....+.+.+|.+++.++|+...
T Consensus 140 ~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 140 EMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp HHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred hcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 323 478999999999999998888888899999999988754
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.85 E-value=3.4e-07 Score=74.46 Aligned_cols=107 Identities=8% Similarity=-0.109 Sum_probs=67.5
Q ss_pred CCeEEEeCCCCCChhhhcccccc-----chhhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 018947 42 KPALVTYPDLALNYMSCFQGLFF-----CPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH- 115 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~-----~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~- 115 (348)
-|+|+++||.+++...++...-. ...........+.|+.++..+.+... ........+++....+.
T Consensus 55 yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 126 (273)
T d1wb4a1 55 YNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTA--------QNFYQEFRQNVIPFVESK 126 (273)
T ss_dssp CEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCT--------TTHHHHHHHTHHHHHHHH
T ss_pred ceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCcc--------ccchhcccccccchhhhh
Confidence 47899999998876655322100 00111222357888888887653221 11122223332222211
Q ss_pred --------------cCCCceeEEEeChhHHHHHHHHHhCCCCcceEEEecCCCCC
Q 018947 116 --------------FGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKA 156 (348)
Q Consensus 116 --------------l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 156 (348)
.+.+++.+.|+|+||..++.+|.++|+++.+++.+++....
T Consensus 127 ~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~~ 181 (273)
T d1wb4a1 127 YSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWY 181 (273)
T ss_dssp SCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCB
T ss_pred hhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccccc
Confidence 23357999999999999999999999999999999887654
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.76 E-value=4e-07 Score=74.84 Aligned_cols=113 Identities=14% Similarity=0.119 Sum_probs=70.1
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCCC----------------CCCCCCCCC---CCCCCCH
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGH----------------EFGAAAISD---DEPVLSV 102 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~----------------G~S~~~~~~---~~~~~~~ 102 (348)
-|+|.++||.+++...|..... ........+..|+.++.... +.+...... ......+
T Consensus 49 yPVLYlLhG~~~~~~~w~~~~~---~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~ 125 (299)
T d1pv1a_ 49 IPTVFYLSGLTCTPDNASEKAF---WQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQM 125 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHSC---HHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBH
T ss_pred CCEEEEcCCCCCCHHHHHHhhh---HHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccch
Confidence 4899999999999888743321 11223345788888874321 111100000 0011233
Q ss_pred HH-HHHHHHHHHHH-cCC---------CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCCCC
Q 018947 103 DD-LADQIAEVLNH-FGL---------GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 103 ~~-~~~dl~~~l~~-l~~---------~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~ 157 (348)
++ +.+++..+++. +.. ++..|.||||||.-|+.+|.+ +|++..++..+++.....
T Consensus 126 ~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~~~ 193 (299)
T d1pv1a_ 126 YDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPS 193 (299)
T ss_dssp HHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCCST
T ss_pred HHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCCcc
Confidence 33 45666666643 332 468899999999999999986 489999999888776543
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=3.4e-06 Score=73.80 Aligned_cols=131 Identities=13% Similarity=0.042 Sum_probs=83.2
Q ss_pred ceeecC-CceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhhh-----hh------ccCCeEEEEeCCC-C
Q 018947 23 NLIKTS-HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEAC-----SL------LLHNFCIYHINPP-G 85 (348)
Q Consensus 23 ~~v~~~-~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~~-----~~------~~~g~~vi~~D~~-G 85 (348)
-++.++ +..++|..+.. .+.|+++.+-|.++.+..+....-..|... .+ ..+-.+++-+|+| |
T Consensus 24 Gyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvG 103 (452)
T d1ivya_ 24 GYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAG 103 (452)
T ss_dssp EEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTT
T ss_pred eeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCC
Confidence 345553 44787776643 357899999999887765521110111100 01 1123469999975 9
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHH----HH---cCCCceeEEEeChhHHHHHHHHHhC----CCCcceEEEecCCC
Q 018947 86 HEFGAAAISDDEPVLSVDDLADQIAEVL----NH---FGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLC 154 (348)
Q Consensus 86 ~G~S~~~~~~~~~~~~~~~~~~dl~~~l----~~---l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~ 154 (348)
.|.|.... .....+..+.+.|+.+++ +. +...+++|.|-|+||..+-.+|... .-.++++++.++..
T Consensus 104 tGfS~~~~--~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~ 181 (452)
T d1ivya_ 104 VGFSYSDD--KFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 181 (452)
T ss_dssp STTCEESS--CCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred cccccCCC--CCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCcc
Confidence 99986432 123456667777765555 32 3446899999999999888887642 23589999998876
Q ss_pred C
Q 018947 155 K 155 (348)
Q Consensus 155 ~ 155 (348)
.
T Consensus 182 d 182 (452)
T d1ivya_ 182 S 182 (452)
T ss_dssp B
T ss_pred C
Confidence 5
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.66 E-value=4.2e-08 Score=83.04 Aligned_cols=107 Identities=12% Similarity=0.006 Sum_probs=74.3
Q ss_pred CCCeEEEeCCCCCChhh-hccccccch----hhhhhccCCeEEEEeCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMS-CFQGLFFCP----EACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNH 115 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~-~~~~~~~~~----~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 115 (348)
++-||||+||+.+-... ....-+|.. ....+...|++|++...... .+.++-+++|...|+.
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~-------------~S~~~RA~eL~~~I~~ 72 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL-------------SSNWDRACEAYAQLVG 72 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS-------------BCHHHHHHHHHHHHHC
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc-------------cCHHHHHHHHHHHHhh
Confidence 44579999998654321 111122332 22345578999999988655 3677888888887763
Q ss_pred c----C-------------------------CCceeEEEeChhHHHHHHHHHhCC-------------------------
Q 018947 116 F----G-------------------------LGAVMCMGVTAGAYILTLFAMKYR------------------------- 141 (348)
Q Consensus 116 l----~-------------------------~~~v~lvGhS~Gg~ia~~~a~~~p------------------------- 141 (348)
. | .+||+||||||||..+-.++...+
T Consensus 73 ~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (388)
T d1ku0a_ 73 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGH 152 (388)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCC
Confidence 2 1 148999999999999988876433
Q ss_pred CCcceEEEecCCCCCCChH
Q 018947 142 HRVLGLILVSPLCKAPSWT 160 (348)
Q Consensus 142 ~~v~~lvl~~~~~~~~~~~ 160 (348)
+.|++|+-++++.......
T Consensus 153 ~~V~SvTTIsTPH~GS~~A 171 (388)
T d1ku0a_ 153 RFVLSVTTIATPHDGTTLV 171 (388)
T ss_dssp CCEEEEEEESCCTTCCGGG
T ss_pred cceEEEEeccCCCCCcchh
Confidence 3699999999988765443
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.31 E-value=0.00013 Score=62.78 Aligned_cols=129 Identities=9% Similarity=0.056 Sum_probs=81.4
Q ss_pred eeecC--CceeEEEEccC----CCCCeEEEeCCCCCChhhhccccccchhh----------hhhccCCeEEEEeC-CCCC
Q 018947 24 LIKTS--HGSLSVTIYGD----QDKPALVTYPDLALNYMSCFQGLFFCPEA----------CSLLLHNFCIYHIN-PPGH 86 (348)
Q Consensus 24 ~v~~~--~~~l~~~~~g~----~~~p~vvllHG~~~~~~~~~~~~~~~~~~----------~~~~~~g~~vi~~D-~~G~ 86 (348)
++.++ +..++|..+.. .+.|.|+.+-|.++.+..+....-..|.. ...-.+-.+++-+| .-|.
T Consensus 20 yl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGt 99 (421)
T d1wpxa1 20 YLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNV 99 (421)
T ss_dssp EEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTS
T ss_pred eeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCC
Confidence 45543 45788876542 45789999999888765542111000000 00112235799999 5599
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------c--CCCceeEEEeChhHHHHHHHHHhC---C---CCcceEEEec
Q 018947 87 EFGAAAISDDEPVLSVDDLADQIAEVLNH-------F--GLGAVMCMGVTAGAYILTLFAMKY---R---HRVLGLILVS 151 (348)
Q Consensus 87 G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-------l--~~~~v~lvGhS~Gg~ia~~~a~~~---p---~~v~~lvl~~ 151 (348)
|.|-... ....+-.+.++|+.++++. + ...+++|.|-|+||..+-.+|.+- . -.++++++.+
T Consensus 100 GfSy~~~---~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGn 176 (421)
T d1wpxa1 100 GFSYSGS---SGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGN 176 (421)
T ss_dssp TTCBCSS---CCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEES
T ss_pred CceecCC---ccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecC
Confidence 9996432 2345667777777776632 1 335899999999999888877532 2 2478999998
Q ss_pred CCCC
Q 018947 152 PLCK 155 (348)
Q Consensus 152 ~~~~ 155 (348)
+...
T Consensus 177 g~~d 180 (421)
T d1wpxa1 177 GLTD 180 (421)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 8765
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.28 E-value=6.8e-07 Score=73.77 Aligned_cols=35 Identities=14% Similarity=0.244 Sum_probs=29.2
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcce-EEEecCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLG-LILVSPL 153 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~-lvl~~~~ 153 (348)
+++.++|+|+||.+++.++..+|+.++. +.++++.
T Consensus 11 ~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~ 46 (318)
T d2d81a1 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGG 46 (318)
T ss_dssp EEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCC
T ss_pred cceEEEEECHHHHHHHHHHHhcccceeeeEEEeccC
Confidence 5799999999999999999999999974 4445443
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.13 E-value=9.9e-05 Score=64.69 Aligned_cols=114 Identities=11% Similarity=0.083 Sum_probs=70.7
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhh----hh------ccCCeEEEEeCCC-CCCCCCCCCC------CCCCCCCHHH
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEAC----SL------LLHNFCIYHINPP-GHEFGAAAIS------DDEPVLSVDD 104 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~----~~------~~~g~~vi~~D~~-G~G~S~~~~~------~~~~~~~~~~ 104 (348)
.|.||.+-|.++.+..+....-..|... .+ -.+-.+++.+|.| |.|.|-.... ......+.++
T Consensus 67 ~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~~ 146 (483)
T d1ac5a_ 67 RPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLED 146 (483)
T ss_dssp CCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCHHH
Confidence 5899999998887654411000001100 01 1123579999975 9998854311 1122456677
Q ss_pred HHHHHHHHHHH-------cCCCceeEEEeChhHHHHHHHHHhC------------CCCcceEEEecCCCC
Q 018947 105 LADQIAEVLNH-------FGLGAVMCMGVTAGAYILTLFAMKY------------RHRVLGLILVSPLCK 155 (348)
Q Consensus 105 ~~~dl~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~------------p~~v~~lvl~~~~~~ 155 (348)
.++++..+++. +...+++|.|-|+||..+-.+|..- .-.++++.+.++...
T Consensus 147 ~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T d1ac5a_ 147 VTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccC
Confidence 77777776643 2346899999999999888777642 114889888887654
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.04 E-value=7.8e-06 Score=65.84 Aligned_cols=34 Identities=12% Similarity=-0.032 Sum_probs=26.5
Q ss_pred CceeEEEeChhHHHHHHHHHhCCCCcceEEEecCC
Q 018947 119 GAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPL 153 (348)
Q Consensus 119 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 153 (348)
.++.++|||+||..++.++.+ ++.+.+++.+++.
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEeccHHHHHHHHHHHc-CcccCEEEEECCc
Confidence 457899999999999976554 5677787776653
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.55 E-value=0.00038 Score=60.89 Aligned_cols=116 Identities=16% Similarity=0.083 Sum_probs=70.5
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC--CCCC--CCCCCCCCCCCCHHHHHHHHH---HH
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFG--AAAISDDEPVLSVDDLADQIA---EV 112 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~S--~~~~~~~~~~~~~~~~~~dl~---~~ 112 (348)
.+.|++|++||.+....+..... +.........+.-||++++|= +|.= ..........+.+.|+...|. +-
T Consensus 94 ~~lPV~v~ihGG~~~~g~~~~~~--~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~n 171 (483)
T d1qe3a_ 94 QNLPVMVWIHGGAFYLGAGSEPL--YDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVREN 171 (483)
T ss_dssp CSEEEEEEECCSTTTSCCTTSGG--GCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEeecccccCCccccc--cccccccccCceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHH
Confidence 35589999999865432211111 111122334479999999983 2321 110011224566777765554 44
Q ss_pred HHHcCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCCCC
Q 018947 113 LNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCKAP 157 (348)
Q Consensus 113 l~~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~~~ 157 (348)
|+.+|. ++|.|+|||.||..+..++.. ....+.++|+.++.....
T Consensus 172 I~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~~~ 220 (483)
T d1qe3a_ 172 ISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTM 220 (483)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCB
T ss_pred HHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcccc
Confidence 555664 579999999999988876653 235799999998776543
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.30 E-value=0.00028 Score=62.81 Aligned_cols=112 Identities=13% Similarity=0.057 Sum_probs=68.0
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHH---HH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAE---VL 113 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~---~l 113 (348)
+.|++|++||.+....+-.... + .........+.-|+++++| |+=.+.. .......+.+.|+...|.. -|
T Consensus 111 ~lPV~v~ihGG~~~~gs~~~~~-~-~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~-~~~~~gN~Gl~Dq~~AL~WV~~nI 187 (542)
T d2ha2a1 111 PTPVLIWIYGGGFYSGAASLDV-Y-DGRFLAQVEGAVLVSMNYRVGTFGFLALPG-SREAPGNVGLLDQRLALQWVQENI 187 (542)
T ss_dssp CEEEEEEECCSTTTCCCTTSGG-G-CTHHHHHHHCCEEEEECCCCHHHHHCCCTT-CSSCCSCHHHHHHHHHHHHHHHHG
T ss_pred CCcEEEEEEECccccccCcccc-c-CchhhhhhccceeEeeeeeccceeeecccc-cccCCCcCCcccHHHHHHHHHHHH
Confidence 4589999999765321111111 1 1111223468999999999 3321111 1122345667777655544 44
Q ss_pred HHcCC--CceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCC
Q 018947 114 NHFGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCK 155 (348)
Q Consensus 114 ~~l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 155 (348)
..+|. ++|.|+|+|.||..+..++... ...+.++|+.+....
T Consensus 188 ~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 188 AAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred HHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 55664 5799999999999888766533 357899999886554
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.00039 Score=61.67 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=69.2
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHc
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAAISDDEPVLSVDDLADQIAEV---LNHF 116 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~S~~~~~~~~~~~~~~~~~~dl~~~---l~~l 116 (348)
.|++|++||.+....+.. . + ........++.-||++++|= +|.=..........+.+.|+...|..+ |..+
T Consensus 113 lPV~v~ihGG~~~~gs~~--~-~-~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 188 (532)
T d2h7ca1 113 LPVMVWIHGGGLMVGAAS--T-Y-DGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASF 188 (532)
T ss_dssp EEEEEEECCSTTTSCCST--T-S-CCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGG
T ss_pred cEEEEEEeCCcccccccc--c-C-CchhhhhcCceEEEEEeeccCCCccccccccccccccccHHHHHHHHHHHHHHHHh
Confidence 489999999876533221 1 1 11123456789999999983 332111111223456777776555444 4556
Q ss_pred CC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCC
Q 018947 117 GL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (348)
Q Consensus 117 ~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (348)
|. ++|.|+|+|.||..+..++.. ....+.++|+.+....
T Consensus 189 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 189 GGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 64 579999999999988776653 3456899999886553
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.14 E-value=0.00048 Score=61.08 Aligned_cols=113 Identities=12% Similarity=0.037 Sum_probs=68.2
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC--CC--CCCCCCCCCCCCCCHHHHHHHHHHH---
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HE--FGAAAISDDEPVLSVDDLADQIAEV--- 112 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G--~S~~~~~~~~~~~~~~~~~~dl~~~--- 112 (348)
.+.|++|++||.+....+..... + .........+.-||++++|= +| .+.. .......+.+.|+...|..+
T Consensus 104 ~~lPV~v~ihGG~~~~g~~~~~~-~-~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~-~~~~~gN~Gl~Dq~~AL~WV~~n 180 (532)
T d1ea5a_ 104 KSTTVMVWIYGGGFYSGSSTLDV-Y-NGKYLAYTEEVVLVSLSYRVGAFGFLALHG-SQEAPGNVGLLDQRMALQWVHDN 180 (532)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGG-G-CTHHHHHHHTCEEEECCCCCHHHHHCCCTT-CSSSCSCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEcCCcccccCCccc-c-CcchhhcccCccEEEEeecccccccccccc-ccCCCCcccchhHHHHHHHHHHH
Confidence 35589999999764321111111 1 11122345689999999983 22 1110 11223456677776555544
Q ss_pred HHHcCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCC
Q 018947 113 LNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (348)
Q Consensus 113 l~~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (348)
|+.+|. ++|.|+|+|.||..+..++.. ....+.++|+.+....
T Consensus 181 I~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 181 IQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred HHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 455654 579999999999987766653 2357899999886654
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=97.07 E-value=0.00054 Score=60.47 Aligned_cols=112 Identities=14% Similarity=0.076 Sum_probs=65.8
Q ss_pred CCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC--CCC--CCCCCCCCCCCCCHHHHHHHHHHH---HH
Q 018947 42 KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEF--GAAAISDDEPVLSVDDLADQIAEV---LN 114 (348)
Q Consensus 42 ~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~--S~~~~~~~~~~~~~~~~~~dl~~~---l~ 114 (348)
.|++|++||.+....+-. .+...........+.-|+++++|= +|. +..........+.+.|+...|..+ |+
T Consensus 97 ~PV~v~ihGG~~~~G~~~--~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~ 174 (517)
T d1ukca_ 97 LPVWLFIQGGGYAENSNA--NYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIE 174 (517)
T ss_dssp EEEEEEECCSTTTSCCSC--SCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGG
T ss_pred ceEEEEEcCCccccCCCc--cccchhhhhhhccccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHHH
Confidence 489999999765433211 111111122234567889999984 221 100000112356677776555544 45
Q ss_pred HcCC--CceeEEEeChhHHHHHHHHHh----CCCCcceEEEecCCCC
Q 018947 115 HFGL--GAVMCMGVTAGAYILTLFAMK----YRHRVLGLILVSPLCK 155 (348)
Q Consensus 115 ~l~~--~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 155 (348)
.+|. ++|.|+|||.||..+..++.. ....+.++|+.++...
T Consensus 175 ~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 175 QFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred hhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 5654 579999999999977655432 2247999999887554
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=97.06 E-value=0.00056 Score=60.64 Aligned_cols=114 Identities=15% Similarity=0.068 Sum_probs=64.3
Q ss_pred CCCCeEEEeCCCCCChhh--hccccccchhhhhhccCCeEEEEeCCCC--CCCCCCC--CCCCCCCCCHHHHHHHH---H
Q 018947 40 QDKPALVTYPDLALNYMS--CFQGLFFCPEACSLLLHNFCIYHINPPG--HEFGAAA--ISDDEPVLSVDDLADQI---A 110 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~--~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~S~~~--~~~~~~~~~~~~~~~dl---~ 110 (348)
.+.|++|++||.+....+ .+..... .....+..++.-||++++|- +|.=..+ .......+.+.|+...| .
T Consensus 112 ~~~PVlv~ihGG~f~~g~~~~~~~~~~-~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~ 190 (534)
T d1llfa_ 112 ANLPVMLWIFGGGFEIGSPTIFPPAQM-VTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVA 190 (534)
T ss_dssp CCEEEEEEECCSTTTSCCGGGSCCHHH-HHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCCCCchhc-cchhhhccCCeEEEEeecCCCcccccCCcccccccccccchhHHHHHHHHHH
Confidence 356899999998753221 1111100 00012336789999999993 2211000 00112345666666544 4
Q ss_pred HHHHHcCC--CceeEEEeChhHHHHHHHHH-hC----C---CCcceEEEecCCC
Q 018947 111 EVLNHFGL--GAVMCMGVTAGAYILTLFAM-KY----R---HRVLGLILVSPLC 154 (348)
Q Consensus 111 ~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~-~~----p---~~v~~lvl~~~~~ 154 (348)
+-|..+|. ++|.|+|||.||..+..+.. .. | ..+.++|+.++..
T Consensus 191 ~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 191 DNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred hhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 44455664 57999999999996654433 22 1 2489999988654
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.0011 Score=58.55 Aligned_cols=114 Identities=14% Similarity=0.083 Sum_probs=68.2
Q ss_pred CCCCeEEEeCCCCCChhhhccccccchhhhhhccCCeEEEEeCCCC--CCC-CCCCCCCCCCCCCHHHHHHHHHHH---H
Q 018947 40 QDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPG--HEF-GAAAISDDEPVLSVDDLADQIAEV---L 113 (348)
Q Consensus 40 ~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G--~G~-S~~~~~~~~~~~~~~~~~~dl~~~---l 113 (348)
.+.|++|++||.+....+-.... + .........+.-|+++++|= +|. +..........+.+.|+...|..+ |
T Consensus 102 ~~~PV~v~ihGG~~~~gs~~~~~-~-~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI 179 (526)
T d1p0ia_ 102 KNATVLIWIYGGGFQTGTSSLHV-Y-DGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNI 179 (526)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGG-G-CTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred CCCceEEEEECCCcccccCcccc-c-CccccccccceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHHH
Confidence 35589999999876532221111 1 11112234589999999983 221 110011223456777776555444 4
Q ss_pred HHcCC--CceeEEEeChhHHHHHHHHH--hCCCCcceEEEecCCCC
Q 018947 114 NHFGL--GAVMCMGVTAGAYILTLFAM--KYRHRVLGLILVSPLCK 155 (348)
Q Consensus 114 ~~l~~--~~v~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~ 155 (348)
+.+|. ++|.|+|+|.||..+..++. .....+.++|+.+....
T Consensus 180 ~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 180 AAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 55664 57999999999998865554 23346888888876654
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.97 E-value=0.00069 Score=60.70 Aligned_cols=114 Identities=18% Similarity=0.103 Sum_probs=67.0
Q ss_pred CCCeEEEeCCCCCChhhh----ccccccchhhhhhc-cCCeEEEEeCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHH-
Q 018947 41 DKPALVTYPDLALNYMSC----FQGLFFCPEACSLL-LHNFCIYHINPPG--HEFGAAAISDDEPVLSVDDLADQIAEV- 112 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~----~~~~~~~~~~~~~~-~~g~~vi~~D~~G--~G~S~~~~~~~~~~~~~~~~~~dl~~~- 112 (348)
+.|++|++||.+....+. +...+.+.. ..+. ..+.-||++++|= +|.-..........+.+.|+...|..+
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg-~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~ 175 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDG-EEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVK 175 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCC-HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccch-hhhhccCCEEEEeecccccccccccccccCCCccchhhHHHHHHHHHh
Confidence 358999999976532211 101100000 1222 3468899999983 221111111223456777776655544
Q ss_pred --HHHcCC--CceeEEEeChhHHHHHHHHHh--CCCCcceEEEecCCCC
Q 018947 113 --LNHFGL--GAVMCMGVTAGAYILTLFAMK--YRHRVLGLILVSPLCK 155 (348)
Q Consensus 113 --l~~l~~--~~v~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 155 (348)
|..+|. ++|.|+|||.||..+..++.. ....+.++|+.+....
T Consensus 176 ~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 224 (579)
T d2bcea_ 176 RNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVGL 224 (579)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCTT
T ss_pred hhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCcc
Confidence 455554 579999999999988766552 3457999999886543
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.89 E-value=0.00045 Score=61.40 Aligned_cols=113 Identities=21% Similarity=0.177 Sum_probs=65.3
Q ss_pred CCCeEEEeCCCCCChhhhcc--ccccchhhhhhccCCeEEEEeCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHH---
Q 018947 41 DKPALVTYPDLALNYMSCFQ--GLFFCPEACSLLLHNFCIYHINPP----GHEFGAAAISDDEPVLSVDDLADQIAE--- 111 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~--~~~~~~~~~~~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~~dl~~--- 111 (348)
+.|++|++||.+....+... ...+ .........+.-||++++| |+-.+..........+.+.|+...|..
T Consensus 121 ~lPV~V~ihGG~f~~G~~~~~~~~~~-~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~ 199 (544)
T d1thga_ 121 KLPVMVWIYGGAFVYGSSAAYPGNSY-VKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCCSHHH-HHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCCccCCCccCCcchh-hhhhhhccCCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhh
Confidence 45899999998754322110 0000 0001224568899999999 221111000001234667776655544
Q ss_pred HHHHcCC--CceeEEEeChhHHHHHHHHHhC--------CCCcceEEEecCCC
Q 018947 112 VLNHFGL--GAVMCMGVTAGAYILTLFAMKY--------RHRVLGLILVSPLC 154 (348)
Q Consensus 112 ~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~ 154 (348)
-|..+|. ++|.|+|||.||..+..++... ...+.++|+.++..
T Consensus 200 nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 200 NIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 4455654 5799999999998766555422 24789999988654
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.30 E-value=0.0049 Score=48.61 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=24.2
Q ss_pred HHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh
Q 018947 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 107 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
+.+..+++.....++++.|||+||.+|..++..
T Consensus 113 ~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 113 SLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 334444455555689999999999999977753
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.27 E-value=0.0044 Score=49.02 Aligned_cols=30 Identities=23% Similarity=0.207 Sum_probs=22.9
Q ss_pred HHHHHHHcCCCceeEEEeChhHHHHHHHHH
Q 018947 109 IAEVLNHFGLGAVMCMGVTAGAYILTLFAM 138 (348)
Q Consensus 109 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~ 138 (348)
+..+++.....++++.|||+||.+|..+|.
T Consensus 123 v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~ 152 (265)
T d1lgya_ 123 VQEQLTAHPTYKVIVTGHSLGGAQALLAGM 152 (265)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHhhCCCceEEEEecccchHHHHHHHH
Confidence 344444555578999999999999987775
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.20 E-value=0.0048 Score=54.92 Aligned_cols=113 Identities=16% Similarity=0.026 Sum_probs=66.6
Q ss_pred CCCeEEEeCCCCCChhhhccccccchhhhhhcc-CCeEEEEeCCCC--CCCCC-------CCCCCCCCCCCHHHHHHHHH
Q 018947 41 DKPALVTYPDLALNYMSCFQGLFFCPEACSLLL-HNFCIYHINPPG--HEFGA-------AAISDDEPVLSVDDLADQIA 110 (348)
Q Consensus 41 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~~~~-~g~~vi~~D~~G--~G~S~-------~~~~~~~~~~~~~~~~~dl~ 110 (348)
+.|++|++||.+....+..... + .. ..+.+ .+.-|+++++|= +|.=. .........+.+.|....|.
T Consensus 138 ~lPV~V~ihGG~f~~Gs~~~~~-~-~~-~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 138 GLPILIWIYGGGFMTGSATLDI-Y-NA-DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214 (571)
T ss_dssp SEEEEEEECCSTTTCCCTTCGG-G-CC-HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCccCCCCcccc-c-ch-hhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHH
Confidence 4589999999765322111111 1 01 23333 368889999883 22110 00011224567777776665
Q ss_pred HHH---HHcCC--CceeEEEeChhHHHHHHHHHhC--CCCcceEEEecCCCCC
Q 018947 111 EVL---NHFGL--GAVMCMGVTAGAYILTLFAMKY--RHRVLGLILVSPLCKA 156 (348)
Q Consensus 111 ~~l---~~l~~--~~v~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~ 156 (348)
.+- ..+|. ++|.|+|||.||..+..++... ...+.++|+.+.....
T Consensus 215 WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~~ 267 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMNA 267 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTTS
T ss_pred HHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccccC
Confidence 544 45554 5799999999999887665532 3468888888765543
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.15 E-value=0.0038 Score=49.45 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=24.7
Q ss_pred HHHHHHHHHcCCCceeEEEeChhHHHHHHHHHh
Q 018947 107 DQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 107 ~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
+.+.++++.....++++.|||+||.+|..+|..
T Consensus 120 ~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 120 ATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 334445555566789999999999999987753
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.02 E-value=0.0036 Score=49.74 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=23.5
Q ss_pred HHHHHHHHcCCCceeEEEeChhHHHHHHHHHh
Q 018947 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 108 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
.+..+++.....++++.|||+||.+|..+|..
T Consensus 126 ~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 126 ELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 33444444455689999999999999987764
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=95.98 E-value=0.0051 Score=48.78 Aligned_cols=32 Identities=13% Similarity=0.178 Sum_probs=24.1
Q ss_pred HHHHHHHHcCCCceeEEEeChhHHHHHHHHHh
Q 018947 108 QIAEVLNHFGLGAVMCMGVTAGAYILTLFAMK 139 (348)
Q Consensus 108 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~ 139 (348)
.+..+++.....++++.|||+||.+|..++..
T Consensus 127 ~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 127 KVEDAVREHPDYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcceeeeccchHHHHHHHHHHH
Confidence 34444445555689999999999999988864
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=94.19 E-value=0.094 Score=38.93 Aligned_cols=55 Identities=11% Similarity=0.178 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC----CCCcceEEEecCCCC
Q 018947 101 SVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY----RHRVLGLILVSPLCK 155 (348)
Q Consensus 101 ~~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~ 155 (348)
...++...+.+..++-...+++|+|+|.|+.++-..+... .++|.++++++-+..
T Consensus 78 G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP~~ 136 (197)
T d1cexa_ 78 AIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYTKN 136 (197)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTTT
T ss_pred HHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCCCC
Confidence 3456666777777777778999999999999999888754 368999999986544
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=90.94 E-value=0.2 Score=37.45 Aligned_cols=81 Identities=16% Similarity=0.005 Sum_probs=48.1
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCCCCC----HHHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC---------
Q 018947 74 HNFCIYHINPPGHEFGAAAISDDEPVLS----VDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY--------- 140 (348)
Q Consensus 74 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~----~~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--------- 140 (348)
.+-.+..+++|..-..... .......| ..++...+.+..++-...+++|+|+|.|+.++-..+...
T Consensus 34 ~~~~~~~v~YPA~~~~~~~-~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~ 112 (207)
T d1qoza_ 34 PGTTSEAIVYPACGGQASC-GGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITN 112 (207)
T ss_dssp TTEEEEECCSCCCSSCGGG-TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCC
T ss_pred CCCeEEEeeeccccccccc-ccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCcccccccc
Confidence 3677888898875322110 00000111 333444445555555567999999999999998776421
Q ss_pred ---------CCCcceEEEecCCCC
Q 018947 141 ---------RHRVLGLILVSPLCK 155 (348)
Q Consensus 141 ---------p~~v~~lvl~~~~~~ 155 (348)
.++|.++++++-+..
T Consensus 113 ~~~~l~~~~~~~V~avvl~GdP~~ 136 (207)
T d1qoza_ 113 TAVPLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp CSCCSCHHHHHHEEEEEEESCTTC
T ss_pred CCCCCChhhhhcEEEEEEEeCCCC
Confidence 125788888864443
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=90.06 E-value=0.26 Score=36.81 Aligned_cols=81 Identities=14% Similarity=0.055 Sum_probs=46.6
Q ss_pred CCeEEEEeCCCCCCCCCCCCCCCCCCCCH----HHHHHHHHHHHHHcCCCceeEEEeChhHHHHHHHHHhC---------
Q 018947 74 HNFCIYHINPPGHEFGAAAISDDEPVLSV----DDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKY--------- 140 (348)
Q Consensus 74 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~----~~~~~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~--------- 140 (348)
.+-.+..+++|........ .......+. .+..+.|.+..++-...+++|+|+|.|+.++-.++...
T Consensus 34 ~~~~~~~v~YpA~~~~~~~-~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~ 112 (207)
T d1g66a_ 34 PGSTAEAINYPACGGQSSC-GGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTN 112 (207)
T ss_dssp TTCEEEECCCCCCSSCGGG-TSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCC
T ss_pred CCCeeEEeccccccccccc-ccccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHhccCCccccccc
Confidence 3567888899874321110 000011122 23334444444555567999999999999998776421
Q ss_pred ---------CCCcceEEEecCCCC
Q 018947 141 ---------RHRVLGLILVSPLCK 155 (348)
Q Consensus 141 ---------p~~v~~lvl~~~~~~ 155 (348)
.++|.++++++-+..
T Consensus 113 ~~~~l~~~~~~~v~avvl~GdP~~ 136 (207)
T d1g66a_ 113 TAVQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp CSCCSCHHHHHHEEEEEEESCTTC
T ss_pred cccCCCchhhhceeeEEEecCCCc
Confidence 135777777775443
|