BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018949
(348 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B3ETC6|ERA_AMOA5 GTPase Era OS=Amoebophilus asiaticus (strain 5a2) GN=era PE=3 SV=1
Length = 296
Score = 184 bits (467), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 153/234 (65%), Gaps = 10/234 (4%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H++G+V ++GKPNVGKSTL N+++G++LSI+T K QTTRH I GI S ++Q+I DTPG
Sbjct: 6 HQAGFVTIIGKPNVGKSTLMNRLVGERLSIITPKAQTTRHSICGIVSDTDFQIIFTDTPG 65
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDA--CKAPERIDEILEEGVGDHKDKLPIL 230
I+ K + L MM ++ A ++ D ++ LVD + P ++++L +G ++P+L
Sbjct: 66 IL-KPAYELQESMMHMLQHALVDTDVLLWLVDIKEKEVPPIVEKVLAQG------RIPVL 118
Query: 231 LVLNKKDLIKPGEIAKKL-EWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
L++NK DLI E + L E++++ +V ++IP++A G +E + IL LP P +Y
Sbjct: 119 LLINKIDLIAGQEALESLVEYWKQKVNVAQIIPIAALQGFQIEQLLKHILVYLPAHPPFY 178
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVCNLTFQHWLIFVEFNAFL 343
PKD++++ PERFFV EIIRE+I +Y+ E+PYA +V F+ + +A +
Sbjct: 179 PKDMLTDRPERFFVAEIIREQILYKYQQEIPYAVEVVIEEFKEEASLIRISAMI 232
>sp|P64086|ERA_STAAW GTPase Era OS=Staphylococcus aureus (strain MW2) GN=era PE=3 SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|A8Z4A6|ERA_STAAT GTPase Era OS=Staphylococcus aureus (strain USA300 / TCH1516)
GN=era PE=3 SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|Q6G900|ERA_STAAS GTPase Era OS=Staphylococcus aureus (strain MSSA476) GN=era PE=3
SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|Q6GGD3|ERA_STAAR GTPase Era OS=Staphylococcus aureus (strain MRSA252) GN=era PE=3
SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|P64085|ERA_STAAN GTPase Era OS=Staphylococcus aureus (strain N315) GN=era PE=1 SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|P64084|ERA_STAAM GTPase Era OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=era PE=1 SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|A6QHB0|ERA_STAAE GTPase Era OS=Staphylococcus aureus (strain Newman) GN=era PE=3
SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|Q5HFJ3|ERA_STAAC GTPase Era OS=Staphylococcus aureus (strain COL) GN=era PE=3 SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|A5IT95|ERA_STAA9 GTPase Era OS=Staphylococcus aureus (strain JH9) GN=era PE=3 SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|Q2FGF6|ERA_STAA3 GTPase Era OS=Staphylococcus aureus (strain USA300) GN=era PE=3
SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|A6U239|ERA_STAA2 GTPase Era OS=Staphylococcus aureus (strain JH1) GN=era PE=3 SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|A7X2W5|ERA_STAA1 GTPase Era OS=Staphylococcus aureus (strain Mu3 / ATCC 700698)
GN=era PE=3 SV=1
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|Q2FY06|ERA_STAA8 GTPase Era OS=Staphylococcus aureus (strain NCTC 8325) GN=era PE=3
SV=2
Length = 299
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|Q2YT12|ERA_STAAB GTPase Era OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=era PE=3 SV=1
Length = 299
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D I+ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ K+E Y+ + D E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPKIEEYQSYMDFTEIVPISALDGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGEIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGEIIREKILHLTSEEIPHAIGV 213
>sp|Q8Y750|ERA_LISMO GTPase Era OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=era PE=3 SV=1
Length = 301
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
+++HPERF + E+IRE++ R EVP++ V
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVV 215
>sp|Q71ZK8|ERA_LISMF GTPase Era OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=era PE=3 SV=1
Length = 301
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
+++HPERF + E+IRE++ R EVP++ V
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVV 215
>sp|C1KVA9|ERA_LISMC GTPase Era OS=Listeria monocytogenes serotype 4b (strain CLIP80459)
GN=era PE=3 SV=1
Length = 301
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y D DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
+++HPERF + E+IRE++ R EVP++ V
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVV 215
>sp|Q92BP8|ERA_LISIN GTPase Era OS=Listeria innocua serovar 6a (strain CLIP 11262)
GN=era PE=3 SV=1
Length = 301
Score = 174 bits (441), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 137/213 (64%), Gaps = 3/213 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLISPEDLIKLIEQYRELMDFEEIIPISALEGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
+++HPERF + E+IRE++ R EVP++ V
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVV 215
>sp|A0AIR3|ERA_LISW6 GTPase Era OS=Listeria welshimeri serovar 6b (strain ATCC 35897 /
DSM 20650 / SLCC5334) GN=era PE=3 SV=1
Length = 301
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 137/213 (64%), Gaps = 3/213 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + D +E+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLISPEDLFKLIEQYRELLDFEEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
+++HPERF + E+IRE++ R EVP++ V
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVV 215
>sp|C6E2H7|ERA_GEOSM GTPase Era OS=Geobacter sp. (strain M21) GN=era PE=3 SV=1
Length = 297
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 139/228 (60%), Gaps = 11/228 (4%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
S +SG+V+++G+PNVGKSTL N+++G+KL I ++KPQTTR+RI GI + P Q++
Sbjct: 2 SEKKFRSGFVSIVGRPNVGKSTLLNRILGEKLMITSDKPQTTRNRIKGIHNVPGGQIVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPER----IDEILEEGVGDHK 224
DTPGI K L+ M+ S+ D I+ LVD PE+ I E+L GV
Sbjct: 62 DTPGIHRAK-SRLNKFMVDEALSSVQGVDLILFLVDGAVDPEKEAGMIKEVLS-GV---- 115
Query: 225 DKLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPL 284
P++LV+NK DL+ GE+ +++ Y E+IPVSA G GVE + + LP
Sbjct: 116 -DAPVILVMNKIDLVPKGELLERMSCYGDTYPFKEIIPVSAGTGDGVEQLVQLVHGLLPE 174
Query: 285 GPAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVCNLTFQH 332
GP Y+P DI+++ PERF V EI+REKIF +EVPY+ V +F+
Sbjct: 175 GPCYFPDDILTDVPERFIVAEIVREKIFRLTHDEVPYSTAVVVDSFKE 222
>sp|B8DE49|ERA_LISMH GTPase Era OS=Listeria monocytogenes serotype 4a (strain HCC23)
GN=era PE=3 SV=1
Length = 301
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N +IGQK++I+++K QTTR+++ G+ + E Q+I DTPGI
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGI 65
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+K + D I ++DA R DE + E + + + P+ L++
Sbjct: 66 HKPK-HKLGDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT--PVFLLI 122
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK DLI P ++ K +E Y + DE+IP+SA G+ V ++ + L +GP YYPKD
Sbjct: 123 NKIDLIAPEDLFKLIEQYRDLMEFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQ 182
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
+++HPERF + E+IRE++ R EVP++ V
Sbjct: 183 ITDHPERFIISELIREQVLQLTREEVPHSVAVV 215
>sp|Q831T9|ERA_ENTFA GTPase Era OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=era PE=3 SV=1
Length = 300
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 141/214 (65%), Gaps = 3/214 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKSTL N+++GQK++I+++K QTTR++I GI + PE Q++ DTPG
Sbjct: 5 HKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTPG 64
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L M+++ +A D + +V A + + D+ + E + ++ P+ L+
Sbjct: 65 IHKPK-HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNS--PVYLI 121
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK D + P ++ +E Y K D E+IP+SA G+ E + D ++ ++P GP Y+P D
Sbjct: 122 INKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPDD 181
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
+++HPE F V E+IREK+ + R+E+P++ V
Sbjct: 182 QITDHPEYFIVSELIREKVLLLTRDEIPHSVAVV 215
>sp|B1HTJ0|ERA_LYSSC GTPase Era OS=Lysinibacillus sphaericus (strain C3-41) GN=era PE=3
SV=1
Length = 305
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 141/219 (64%), Gaps = 5/219 (2%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +KSG+++++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + + QMI
Sbjct: 4 TRSGYKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTTDSQMIFI 63
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDE-ILEEGVGDHKDKL 227
DTPGI + K H L M+K ++ D I+ +V+A + + DE ILE G+
Sbjct: 64 DTPGIHKPK-HKLGDFMLKVAKNTLREVDVIMFMVNAEQKLGKGDEFILEMLAGN---ST 119
Query: 228 PILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPA 287
P+ LV+NK D I P E+ +E Y++ + E+IP+SA G+ VE + D + LP GP
Sbjct: 120 PVFLVINKIDQIHPDELLGIIESYKERYEFAEIIPISALQGNNVESLLDTLPKYLPEGPQ 179
Query: 288 YYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
YYP D V++HPERF + E+IREK+ R E+P++ V
Sbjct: 180 YYPADQVTDHPERFIIYELIREKVLHLTREEIPHSIAVV 218
>sp|B2TMB9|ERA_CLOBB GTPase Era OS=Clostridium botulinum (strain Eklund 17B / Type B)
GN=era PE=3 SV=1
Length = 295
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 136/212 (64%), Gaps = 3/212 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGEDYQIVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK--CPVYLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P +AK LE Y + E++P++A G V+ + D + T+LP GP YYP+D+
Sbjct: 120 NKIDESTPERVAKSLEMYSSEFNFKEIVPIAAIKGKNVDTLVDLMKTELPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+++ PERF V EI+REK R+EVP+ V
Sbjct: 180 ITDVPERFVVSEIVREKALRCLRDEVPHGIAV 211
>sp|B2V2K0|ERA_CLOBA GTPase Era OS=Clostridium botulinum (strain Alaska E43 / Type E3)
GN=era PE=3 SV=1
Length = 295
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 136/212 (64%), Gaps = 3/212 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQ++ DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQIVFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK--CPVYLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P +AK LE Y + E++P++A G V+ + D + T+LP GP YYP+D+
Sbjct: 120 NKIDESTPERVAKSLEMYSSEFNFKEIVPIAAIKGKNVDTLVDLMKTELPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+++ PERF V EI+REK R+EVP+ V
Sbjct: 180 ITDVPERFVVSEIVREKALRCLRDEVPHGIAV 211
>sp|Q4L6R7|ERA_STAHJ GTPase Era OS=Staphylococcus haemolyticus (strain JCSC1435) GN=era
PE=3 SV=2
Length = 299
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 137/213 (64%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRNDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEEIGRGDEYIMEMLKNVK--TPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + ++E Y+K+ + E++P+SA G V+ D + T LP GP YYP D
Sbjct: 121 LNKIDLVHPDALMPRIEQYQKYMNFTEIVPISALEGLNVDHFIDVLKTYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F V EIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGV 213
>sp|Q49Y10|ERA_STAS1 GTPase Era OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=era PE=3 SV=1
Length = 299
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 137/213 (64%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+++++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ + D I+ +V+ + R DE + E + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMRVATNTLSEIDAIMFMVNVNEDIGRGDEYIMEML--KTIKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P E+ ++E Y+K+ D E++P+SA G V+ + I + LP GP YYP D
Sbjct: 121 LNKIDLVHPDELMPRIEKYKKYMDFTEIVPISALEGLNVDHFINVIKSYLPEGPKYYPDD 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F VGE+IREKI E+P+A V
Sbjct: 181 QISDHPEQFVVGELIREKILHLTSEEIPHAIGV 213
>sp|Q39T84|ERA_GEOMG GTPase Era OS=Geobacter metallireducens (strain GS-15 / ATCC 53774
/ DSM 7210) GN=era PE=3 SV=1
Length = 298
Score = 171 bits (432), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 141/220 (64%), Gaps = 5/220 (2%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+V+++G+PNVGKSTL N+++G+K+ I ++KPQTTR+RI GI + P Q++ DTPGI
Sbjct: 7 RSGFVSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNVPGAQIVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAP-ERIDEILEEGVGDHKDKLPILLV 232
+ + L+ M++ SA D ++ LV+A + P E+ EI++ G P+ LV
Sbjct: 67 HQAR-SRLNKYMVEVALSAIREVDLVLFLVEANQKPGEQEQEIIDVLAGATA---PVFLV 122
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL + G + +++ Y+ E++P+SA G GV+ + + + LP GP Y+P D
Sbjct: 123 INKVDLTEKGAVLERIAAYKDRYPFREIVPISAGTGDGVDHLVELVRKALPQGPVYFPDD 182
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQVCNLTFQH 332
I+++ PERF EIIREK+F R+EVPYA V +F+
Sbjct: 183 ILTDVPERFIAAEIIREKVFRMTRDEVPYATAVEVDSFKE 222
>sp|B0TAF1|ERA_HELMI GTPase Era OS=Heliobacterium modesticaldum (strain ATCC 51547 /
Ice1) GN=era PE=3 SV=1
Length = 299
Score = 171 bits (432), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
+SG+++++G+PNVGKSTL NQ+IG+K++I+++KPQTTR+RI+G+ + P+ Q I DTPGI
Sbjct: 5 RSGFISIIGRPNVGKSTLMNQLIGKKVAIMSDKPQTTRNRIVGVLNAPKGQAIFLDTPGI 64
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L +M+ R D I+ +VDA + P ++ + + + D K P+ LV+
Sbjct: 65 HKPK-HKLGEIMVTTARKTLGEVDLILYVVDASEEPGGGEQFISQMLKDIKT--PVFLVV 121
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D + E KK+ Y + E+IPVSAK ++ ++D I KLP GP YYP
Sbjct: 122 NKMDTVSREEGLKKISQYSQMVAWQELIPVSAKEKTNLDRLKDLIFAKLPEGPLYYPAGS 181
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
++ PER + E+IREK+ R E+P++ V
Sbjct: 182 FTDQPERQLMAEMIREKVLHATREEIPHSVAVI 214
>sp|Q5HNY0|ERA_STAEQ GTPase Era OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=era PE=3 SV=1
Length = 299
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F V EIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGV 213
>sp|Q8CP21|ERA_STAES GTPase Era OS=Staphylococcus epidermidis (strain ATCC 12228) GN=era
PE=3 SV=1
Length = 299
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+V+++G+PNVGKST N++IG K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MM+ ++ D I+ +V+ + R DE + E + + K PI LV
Sbjct: 64 IHKPK-HKLGDYMMRVAKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVK--TPIFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
LNK DL+ P + K+E Y+ + D ++IP+SA G V+ D + + LP GP YYP +
Sbjct: 121 LNKIDLVHPDTLMPKIEQYQSYMDFTDIIPISALEGLNVDHFIDVLKSFLPEGPKYYPDN 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F V EIIREKI E+P+A V
Sbjct: 181 QISDHPEQFVVSEIIREKILHLTSEEIPHAIGV 213
>sp|Q8XIU8|ERA_CLOPE GTPase Era OS=Clostridium perfringens (strain 13 / Type A) GN=era
PE=3 SV=1
Length = 296
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIVEQLKNQ--KAPVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+++ ERF V EI+REK EVP+ V
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAV 211
>sp|Q0TNU5|ERA_CLOP1 GTPase Era OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=era PE=3 SV=1
Length = 296
Score = 168 bits (425), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGEDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQ--KAPVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+++ ERF V EI+REK EVP+ V
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAV 211
>sp|Q0SRG1|ERA_CLOPS GTPase Era OS=Clostridium perfringens (strain SM101 / Type A)
GN=era PE=3 SV=1
Length = 296
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG++ ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFITIVGRPNVGKSTLTNLLMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + D ++ L + C+ R D+ + E + + K P++ VL
Sbjct: 63 HKPK-HKLGEYMVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQ--KAPVIFVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D P ++AK LE + K D E+IP+SA + + + ++ LP GP YYP D+
Sbjct: 120 NKVDESSPEKVAKTLELFSKEYDFAEMIPISAMKAKNTDKLLELMVKYLPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+++ ERF V EI+REK EVP+ V
Sbjct: 180 ITDVQERFVVAEIVREKALKNLSQEVPHGIAV 211
>sp|Q8EPY0|ERA_OCEIH GTPase Era OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM
11309 / KCTC 3954 / HTE831) GN=era PE=3 SV=1
Length = 300
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 138/215 (64%), Gaps = 3/215 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N KSG+++++G+PNVGKST N++IGQK++I+++K QTTR++I G+ + + QMI DTP
Sbjct: 4 NFKSGFLSIIGRPNVGKSTFMNKVIGQKIAIMSDKAQTTRNKIQGVFTTNDAQMIFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI + K H L M++ D I+ +++A + R D+ + + + K P+ L
Sbjct: 64 GIHKPK-HRLGDFMVQIAEDTLNEVDSILFMINADEGYGRGDQYIIDLL--QKVNSPVFL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
++NK DLI P ++ +E Y+ D +E+IP+SA G+ V+ + D + LP GP YYP+
Sbjct: 121 IINKIDLIHPDQLLPLIEKYKSLYDFEEIIPISALEGNNVDHLVDVLKEHLPEGPQYYPE 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
D V++HPERF + E+IREK+ + EVP++ V
Sbjct: 181 DQVTDHPERFVISELIREKVLHLTKEEVPHSIAVV 215
>sp|Q9KD52|ERA_BACHD GTPase Era OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=era PE=3 SV=1
Length = 304
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 135/217 (62%), Gaps = 11/217 (5%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V+++G+PNVGKSTL N +IGQK++I+++KPQTTR++I G+ + + Q++ DTPGI
Sbjct: 9 KSGFVSIIGRPNVGKSTLLNHVIGQKIAIMSDKPQTTRNKIQGVYTSEDSQIVFIDTPGI 68
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKA----PERIDEILEEGVGDHKDKLPI 229
+ K H L MMK ++ D I+ +VD +A E I E L+E K P+
Sbjct: 69 HKPK-HKLGDFMMKVAQNTLKEVDLILYVVDGAEAFGPGEEFIIERLKEA------KTPV 121
Query: 230 LLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYY 289
+LV+NK D + P ++ +E Y + +EV+PVSA G+ V + I L GP YY
Sbjct: 122 ILVINKIDKVHPDDLLSLIETYRHKHEFEEVVPVSALQGNNVPTLLLEITKHLSEGPQYY 181
Query: 290 PKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
P D V++HPERF + E+IREK+ R E+P++ V
Sbjct: 182 PSDQVTDHPERFVIAELIREKVLHLTREEIPHSIAVV 218
>sp|A6LRP9|ERA_CLOB8 GTPase Era OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=era PE=3 SV=1
Length = 298
Score = 164 bits (416), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+V ++G+PNVGKSTL N ++G+KLSIV+NKPQTTR+ I I +G +YQMI DTPGI
Sbjct: 3 KSGFVTIVGRPNVGKSTLLNYIMGEKLSIVSNKPQTTRNNIQTILTGDDYQMIFVDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
+ K H L M+ + + + + D ++ L + + + D+ + E + D K P+ LVL
Sbjct: 63 HKPK-HKLGEYMVNSAKESTKDVDLVLFLTNPDEEIGKGDKFILETLRDK--KCPVFLVL 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK LE Y K E++P+SA G V+ + + + +P GP YYP D+
Sbjct: 120 NKVDESTQDRVAKSLEMYSKEFKFAEIVPISAIKGKNVDVLVELMKKAMPEGPKYYPDDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+++ E+F V EIIREK R+EVP+ V
Sbjct: 180 ITDVQEKFVVSEIIREKALRTLRDEVPHGIAV 211
>sp|B3WEL1|ERA_LACCB GTPase Era OS=Lactobacillus casei (strain BL23) GN=era PE=3 SV=1
Length = 300
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 140/220 (63%), Gaps = 17/220 (7%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ +V P+SA G+ V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
P YYP+D +++HPE F VGE+IREKI R+EVP+A V
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAV 213
>sp|A5G693|ERA_GEOUR GTPase Era OS=Geobacter uraniireducens (strain Rf4) GN=era PE=3
SV=1
Length = 297
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 136/224 (60%), Gaps = 3/224 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
+ +SG+V+++G+PNVGKSTL N+++G K+ I ++KPQTTR+RI GI + P QM+
Sbjct: 2 TEKQFRSGFVSIIGRPNVGKSTLLNRILGDKIVITSDKPQTTRNRIQGIHNLPGCQMVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K L+ M+ S+ D I+ LV+A P + ++ E + + P
Sbjct: 62 DTPGIHRAK-SKLNKYMVDVALSSIKEVDVILFLVEADAKPANQEGMILELLANADA--P 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+LLV+NK DL+ + +++ Y E++PVSA G GVE + + + +P GP Y
Sbjct: 119 VLLVINKIDLVAKEALLERIAAYAALYPFREIVPVSALSGDGVERLVEVVHGFIPAGPPY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVCNLTFQH 332
+P DI+++ PERF V E+IREKIF +EVPY+ V +F+
Sbjct: 179 FPDDILTDLPERFIVAEMIREKIFRLTHDEVPYSVAVVVESFKE 222
>sp|Q5FJT7|ERA_LACAC GTPase Era OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56
/ N2 / NCFM) GN=era PE=3 SV=1
Length = 301
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 131/216 (60%), Gaps = 10/216 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA++G+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + Q+I DTPGI
Sbjct: 7 KSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDRMQVIFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLV---DACKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V D K + I ++L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEDMGKGDQYIADLLKEV------KVPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G++D+ + I LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLPIMDSYHKLDGFKEILPISATQGIGIDDLLNTIYKYLPAGPQYYD 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
D +++ PE F V E+IRE+I EVP+A V
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVV 215
>sp|B9DNL3|ERA_STACT GTPase Era OS=Staphylococcus carnosus (strain TM300) GN=era PE=3
SV=1
Length = 299
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
HKSG+VA++G+PNVGKST N+++G K++I+++K QTTR++I G+ + + Q+I DTPG
Sbjct: 4 HKSGFVAIIGRPNVGKSTFMNRVLGHKIAIMSDKAQTTRNKIHGVMTEDDAQIIFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLV 232
I + K H L MMK ++ D ++ +V+A + R DE + E + + K P+ LV
Sbjct: 64 IHKPK-HKLGDYMMKVAKNTLTEVDAVIFMVNANEEIGRGDEYIMEMLKN--IKTPVFLV 120
Query: 233 LNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKD 292
+NK DL+ P +I +E YEK E +P+SA G V+ + + + +P GP YYP
Sbjct: 121 INKIDLVHPDQIMPIIESYEKHMHFTEAVPMSALEGLNVDHFINVLKSYMPEGPQYYPDG 180
Query: 293 IVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+S+HPE+F V E+IREK+ E+P++ V
Sbjct: 181 QISDHPEQFVVSELIREKVLHLTSEEIPHSIGV 213
>sp|P42182|ERA_BACSU GTPase Era OS=Bacillus subtilis (strain 168) GN=era PE=1 SV=1
Length = 301
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 135/218 (61%), Gaps = 3/218 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ + KSG+V+++G+PNVGKST N++IGQK++I+++KPQTTR+++ G+ + Q I
Sbjct: 2 TNESFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTGTSQTIFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI + K H L MMK ++ D I+ +++A + + DE + E + P
Sbjct: 62 DTPGIHKPK-HKLGDFMMKVAQNTLKEVDLILFMINAEEGYGKGDEFIIEKL--QTMSTP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
+ L++NK D I P ++ ++ Y K E++P+SA G+ +E + I LP GP +
Sbjct: 119 VFLIVNKIDKIHPDQLLLLIDEYRKRYPFKEIVPISALEGNNIETLLAQIEAYLPEGPQF 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
YP D V++HPERF + E+IREK+ R E+P++ V
Sbjct: 179 YPSDQVTDHPERFIISELIREKVLHLTREEIPHSIAVA 216
>sp|Q1WTU6|ERA_LACS1 GTPase Era OS=Lactobacillus salivarius (strain UCC118) GN=era PE=3
SV=1
Length = 300
Score = 161 bits (408), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
Query: 112 NHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTP 171
N SG+VA+LG+PNVGKST N+++GQK++I+++K QTTR++I GI + + Q++ DTP
Sbjct: 4 NFHSGFVAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTP 63
Query: 172 GIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILL 231
GI K L M+++ S D ++ +V+A + R D+ + E + + K PI L
Sbjct: 64 GI-HKPHSRLGDFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNVKK--PIYL 120
Query: 232 VLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPK 291
V+NK D I P ++ + ++ Y D EV P+SA G+ ++ + ++ LP GP YYP
Sbjct: 121 VINKIDQIHPDKLLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLVNTLPEGPQYYPA 180
Query: 292 DIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
D +++HPERF GE+IREK+ R EVP++ V
Sbjct: 181 DQITDHPERFIAGELIREKVLELTREEVPHSVAVV 215
>sp|A8YVM7|ERA_LACH4 GTPase Era OS=Lactobacillus helveticus (strain DPC 4571) GN=era
PE=3 SV=1
Length = 301
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 131/216 (60%), Gaps = 10/216 (4%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKSTL N ++GQK++I +NKPQTTR+RI GI + + Q++ DTPGI
Sbjct: 7 KSGFVALLGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDKMQVVFVDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDA---CKAPERIDEILEEGVGDHKDKLPIL 230
K LD M K S+ + D ++ +V+ K + I +L+E K+P+
Sbjct: 67 F-KPHSKLDDYMDKASLSSLNDVDLVLFMVEPEEIGKGDQYIANLLKEV------KVPVF 119
Query: 231 LVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYP 290
LV+NK D I P ++ ++ Y K E++P+SA G G+ED+ + I LP GP YY
Sbjct: 120 LVINKVDQIHPNKLLLIMDSYHKLEGFKEILPISATQGIGIEDLLNTINKYLPEGPQYYG 179
Query: 291 KDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVC 326
D +++ PE F V E+IRE+I EVP+A V
Sbjct: 180 ADQITDRPEYFVVAELIREQILRLTSQEVPHATAVA 215
>sp|Q038T2|ERA_LACC3 GTPase Era OS=Lactobacillus casei (strain ATCC 334) GN=era PE=3
SV=1
Length = 300
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 139/220 (63%), Gaps = 17/220 (7%)
Query: 113 HKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPG 172
H SG+VA++G+PNVGKST N+++G+K++I++ K QTTR++I GI + P+ Q++ DTPG
Sbjct: 4 HHSGFVAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPG 63
Query: 173 IIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGD-------HKD 225
I + K + LD+ M K S D I+ +V+A DE E+G GD +
Sbjct: 64 IHKPK-NELDTYMDKAALSTLNQVDAILFMVEA-------DE--EKGPGDGYIMRQLAEV 113
Query: 226 KLPILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLG 285
K P+ L++NK DL+KP ++ +E Y+ +V P+SA + V+++ + LP+G
Sbjct: 114 KKPVYLIINKIDLVKPDDLLPLIESYQHDYAFAQVFPISATMENNVDELLTALTDALPVG 173
Query: 286 PAYYPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
P YYP+D +++HPE F VGE+IREKI R+EVP+A V
Sbjct: 174 PQYYPEDQLTDHPEYFVVGELIREKILELTRDEVPHAVAV 213
>sp|Q031W8|ERA_LACLS GTPase Era OS=Lactococcus lactis subsp. cremoris (strain SK11)
GN=era PE=3 SV=1
Length = 303
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 137/219 (62%), Gaps = 3/219 (1%)
Query: 109 SHPNHKSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILY 168
++ KSG+VA+LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + Q++
Sbjct: 2 TNKKFKSGFVAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFI 61
Query: 169 DTPGIIEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLP 228
DTPGI K + L M+++ S D ++ +V A + + ++ E + K ++P
Sbjct: 62 DTPGI-HKPHNALGDFMVQSAYSTLRECDVVLFMVAADEPRSTGENMIIERL--KKAEVP 118
Query: 229 ILLVLNKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAY 288
++LV+NK D I P + + + Y + EV+P+SAK G+ E + D + KL GP Y
Sbjct: 119 VILVVNKIDKIHPDRLFEIVADYTSQMEFSEVVPISAKQGNNTERLIDTLSEKLDEGPQY 178
Query: 289 YPKDIVSEHPERFFVGEIIREKIFMQYRNEVPYACQVCN 327
+P+D +++HPERF V E+IREKI + R EVP++ V
Sbjct: 179 FPEDQITDHPERFLVSEMIREKILLLTREEVPHSIAVTT 217
>sp|P0A3C2|ERA_LACLM GTPase Era OS=Lactococcus lactis subsp. cremoris (strain MG1363)
GN=era PE=3 SV=1
Length = 303
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 135/214 (63%), Gaps = 3/214 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + Q++ DTPGI
Sbjct: 7 KSGFVAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+++ S D ++ +V A + + ++ E + K ++P++LV+
Sbjct: 67 -HKPHNALGDFMVQSAYSTLRECDVVLFMVAADEPRSTGENMIIERL--KKAEVPVILVV 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P + + + Y + EV+P+SAK G+ E + D + KL GP Y+P+D
Sbjct: 124 NKIDKIHPDRLFEIVADYTSQMEFSEVVPISAKQGNNTERLIDTLSEKLDEGPQYFPEDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVCN 327
+++HPERF V E+IREKI + R EVP++ V
Sbjct: 184 ITDHPERFLVSEMIREKILLLTREEVPHSIAVTT 217
>sp|P0A3C1|ERA_LACLA GTPase Era OS=Lactococcus lactis subsp. lactis (strain IL1403)
GN=era PE=3 SV=1
Length = 303
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 135/214 (63%), Gaps = 3/214 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+VA+LG+PNVGKST N ++GQK++I+++KPQTTR++I GI + Q++ DTPGI
Sbjct: 7 KSGFVAILGRPNVGKSTFMNHVMGQKIAIMSDKPQTTRNKIQGIYTTENEQIVFIDTPGI 66
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K + L M+++ S D ++ +V A + + ++ E + K ++P++LV+
Sbjct: 67 -HKPHNALGDFMVQSAYSTLRECDVVLFMVAADEPRSTGENMIIERL--KKAEVPVILVV 123
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D I P + + + Y + EV+P+SAK G+ E + D + KL GP Y+P+D
Sbjct: 124 NKIDKIHPDRLFEIVADYTSQMEFSEVVPISAKQGNNTERLIDTLSEKLDEGPQYFPEDQ 183
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQVCN 327
+++HPERF V E+IREKI + R EVP++ V
Sbjct: 184 ITDHPERFLVSEMIREKILLLTREEVPHSIAVTT 217
>sp|A0Q1Q0|ERA_CLONN GTPase Era OS=Clostridium novyi (strain NT) GN=era PE=3 SV=1
Length = 294
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 114 KSGYVAVLGKPNVGKSTLANQMIGQKLSIVTNKPQTTRHRILGICSGPEYQMILYDTPGI 173
KSG+++++G+PNVGKSTL N+++G+KLSIV+ +PQTTR+ I + + +YQ++ DTPGI
Sbjct: 3 KSGFISIIGRPNVGKSTLTNEILGEKLSIVSCRPQTTRNNIRAVLTRDDYQLVFLDTPGI 62
Query: 174 IEKKIHMLDSMMMKNVRSAGINADCIVVLVDACKAPERIDEILEEGVGDHKDKLPILLVL 233
K H L M+K ++ D IV + + DE++ EG+ + K P+ LV+
Sbjct: 63 -HKPRHKLGEYMVKAAETSTDEVDLIVFITTPEGEISKGDELILEGLKNSKK--PVFLVI 119
Query: 234 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGVEDIRDWILTKLPLGPAYYPKDI 293
NK D +AK L+ Y ++ D E+IP+SA+ V+ + + ++ +P GP YYP+D+
Sbjct: 120 NKIDENPQELVAKTLKQYSEYMDFAEIIPISARKSKNVDTLLELMIKYMPEGPKYYPEDM 179
Query: 294 VSEHPERFFVGEIIREKIFMQYRNEVPYACQV 325
+++ ERF V EIIREK EVP+ V
Sbjct: 180 ITDVQERFVVSEIIREKALKLLSEEVPHGIAV 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,512,903
Number of Sequences: 539616
Number of extensions: 6064235
Number of successful extensions: 26838
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1708
Number of HSP's successfully gapped in prelim test: 1814
Number of HSP's that attempted gapping in prelim test: 22807
Number of HSP's gapped (non-prelim): 4271
length of query: 348
length of database: 191,569,459
effective HSP length: 118
effective length of query: 230
effective length of database: 127,894,771
effective search space: 29415797330
effective search space used: 29415797330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)