Query 018952
Match_columns 348
No_of_seqs 329 out of 1453
Neff 11.7
Searched_HMMs 46136
Date Fri Mar 29 05:27:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018952.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018952hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 5.5E-36 1.2E-40 233.4 22.0 285 35-344 20-321 (322)
2 PLN02824 hydrolase, alpha/beta 100.0 1.2E-36 2.5E-41 250.6 18.3 271 38-342 9-293 (294)
3 PRK03592 haloalkane dehalogena 100.0 1.5E-35 3.3E-40 244.1 18.6 277 38-346 8-292 (295)
4 TIGR02240 PHA_depoly_arom poly 100.0 4.7E-35 1E-39 238.7 19.5 262 40-345 5-268 (276)
5 PRK00870 haloalkane dehalogena 100.0 8.3E-35 1.8E-39 240.2 20.6 271 33-342 15-300 (302)
6 PLN02385 hydrolase; alpha/beta 100.0 2.1E-34 4.4E-39 242.0 20.9 273 35-344 59-346 (349)
7 PLN02578 hydrolase 100.0 8.2E-34 1.8E-38 238.3 23.2 275 45-342 73-354 (354)
8 PLN02679 hydrolase, alpha/beta 100.0 2.6E-34 5.7E-39 241.4 20.2 270 41-344 65-358 (360)
9 PRK06489 hypothetical protein; 100.0 2E-33 4.3E-38 236.8 24.8 280 45-345 47-359 (360)
10 PLN02965 Probable pheophorbida 100.0 8.3E-34 1.8E-38 228.5 21.0 248 64-344 4-254 (255)
11 PRK10673 acyl-CoA esterase; Pr 100.0 9.9E-34 2.1E-38 228.9 19.5 250 49-342 2-254 (255)
12 PRK03204 haloalkane dehalogena 100.0 3.4E-33 7.4E-38 227.9 21.9 267 36-341 13-286 (286)
13 PRK10349 carboxylesterase BioH 100.0 1.3E-33 2.7E-38 228.0 17.8 251 49-341 3-254 (256)
14 TIGR03056 bchO_mg_che_rel puta 100.0 6.4E-33 1.4E-37 227.3 21.9 264 43-341 11-278 (278)
15 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.1E-32 2.4E-37 226.1 22.1 257 47-342 19-282 (282)
16 PLN03087 BODYGUARD 1 domain co 100.0 4.4E-32 9.5E-37 230.5 24.7 281 43-343 181-479 (481)
17 PLN03084 alpha/beta hydrolase 100.0 2.1E-32 4.5E-37 228.4 21.8 276 35-342 102-383 (383)
18 PRK10749 lysophospholipase L2; 100.0 3.9E-32 8.4E-37 226.2 22.7 276 38-343 31-329 (330)
19 PLN02298 hydrolase, alpha/beta 100.0 3.7E-32 8E-37 227.2 20.5 274 32-343 27-317 (330)
20 PHA02857 monoglyceride lipase; 100.0 6.2E-32 1.4E-36 220.6 20.2 260 41-343 4-273 (276)
21 TIGR03611 RutD pyrimidine util 100.0 3E-32 6.5E-37 220.7 18.0 254 50-342 1-257 (257)
22 PRK08775 homoserine O-acetyltr 100.0 6.7E-32 1.4E-36 226.1 17.8 269 46-346 44-342 (343)
23 PRK07581 hypothetical protein; 100.0 1.3E-31 2.7E-36 224.7 19.1 282 46-343 24-336 (339)
24 KOG4409 Predicted hydrolase/ac 100.0 1.5E-30 3.3E-35 203.6 19.8 129 35-170 63-196 (365)
25 TIGR01392 homoserO_Ac_trn homo 100.0 5E-31 1.1E-35 221.6 18.4 288 45-341 13-351 (351)
26 KOG1454 Predicted hydrolase/ac 100.0 4.6E-31 1E-35 215.5 17.4 284 37-343 25-324 (326)
27 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.4E-30 3E-35 210.1 19.4 248 50-341 2-251 (251)
28 PRK00175 metX homoserine O-ace 100.0 1.7E-30 3.6E-35 219.8 19.2 292 46-345 31-376 (379)
29 COG2267 PldB Lysophospholipase 100.0 1E-29 2.2E-34 205.8 21.8 272 36-345 8-296 (298)
30 PRK11126 2-succinyl-6-hydroxy- 100.0 3.8E-30 8.3E-35 206.2 19.2 237 63-342 2-241 (242)
31 TIGR01250 pro_imino_pep_2 prol 100.0 7.3E-30 1.6E-34 210.2 20.4 263 45-341 9-288 (288)
32 TIGR01738 bioH putative pimelo 100.0 1.8E-30 3.9E-35 208.7 16.2 240 63-340 4-245 (245)
33 PLN02211 methyl indole-3-aceta 100.0 2.6E-29 5.7E-34 203.0 21.9 261 45-342 4-269 (273)
34 PLN02652 hydrolase; alpha/beta 100.0 2.4E-29 5.2E-34 211.5 20.5 263 40-343 113-387 (395)
35 TIGR01249 pro_imino_pep_1 prol 100.0 8.3E-29 1.8E-33 204.4 21.9 123 38-169 5-130 (306)
36 KOG1455 Lysophospholipase [Lip 100.0 6.2E-29 1.3E-33 190.9 18.5 269 36-342 26-311 (313)
37 KOG2984 Predicted hydrolase [G 100.0 1.2E-29 2.6E-34 181.7 13.1 250 37-344 21-277 (277)
38 PLN02894 hydrolase, alpha/beta 100.0 1.4E-28 3E-33 208.8 21.2 121 41-169 83-211 (402)
39 PF12697 Abhydrolase_6: Alpha/ 100.0 6E-29 1.3E-33 197.5 16.4 222 66-335 1-228 (228)
40 TIGR03695 menH_SHCHC 2-succiny 100.0 4E-28 8.7E-33 195.6 19.0 245 63-341 1-251 (251)
41 PRK14875 acetoin dehydrogenase 100.0 3.6E-28 7.8E-33 207.2 18.6 252 46-342 117-370 (371)
42 PLN02511 hydrolase 100.0 3.7E-28 8.1E-33 205.4 18.3 275 36-343 70-365 (388)
43 PLN02980 2-oxoglutarate decarb 100.0 1.9E-27 4.2E-32 230.8 20.4 259 50-345 1360-1641(1655)
44 PRK05855 short chain dehydroge 100.0 3.2E-27 6.9E-32 213.4 19.3 276 40-344 5-293 (582)
45 TIGR01607 PST-A Plasmodium sub 100.0 6.2E-27 1.3E-31 194.2 19.2 265 42-341 2-331 (332)
46 PRK06765 homoserine O-acetyltr 99.9 4.9E-26 1.1E-30 190.7 20.9 285 46-342 39-387 (389)
47 KOG2382 Predicted alpha/beta h 99.9 3.8E-26 8.3E-31 178.8 18.0 260 48-344 36-314 (315)
48 COG1647 Esterase/lipase [Gener 99.9 2.8E-26 6.1E-31 167.6 15.9 221 63-342 15-243 (243)
49 PRK05077 frsA fermentation/res 99.9 8.3E-25 1.8E-29 185.7 23.1 240 36-343 167-412 (414)
50 PRK10985 putative hydrolase; P 99.9 9E-25 1.9E-29 181.4 21.2 273 38-343 32-320 (324)
51 PRK13604 luxD acyl transferase 99.9 4.4E-24 9.4E-29 169.4 20.7 126 38-170 10-142 (307)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 5.1E-23 1.1E-27 166.7 22.0 116 46-169 10-134 (274)
53 PLN02872 triacylglycerol lipas 99.9 3.4E-23 7.3E-28 173.6 18.7 135 33-170 40-198 (395)
54 PF00561 Abhydrolase_1: alpha/ 99.9 2.2E-24 4.8E-29 171.6 9.2 218 95-337 1-229 (230)
55 KOG4391 Predicted alpha/beta h 99.9 1.4E-22 3.1E-27 147.4 16.7 227 33-344 50-283 (300)
56 PRK11071 esterase YqiA; Provis 99.9 1.5E-22 3.3E-27 153.8 17.3 185 64-341 2-189 (190)
57 TIGR01838 PHA_synth_I poly(R)- 99.9 2.3E-22 5E-27 173.0 17.8 260 62-328 187-459 (532)
58 KOG1552 Predicted alpha/beta h 99.9 3.5E-22 7.5E-27 151.0 16.3 216 36-345 34-254 (258)
59 TIGR01836 PHA_synth_III_C poly 99.9 3.7E-22 8E-27 167.8 17.4 266 62-342 61-349 (350)
60 PRK10566 esterase; Provisional 99.9 3E-21 6.4E-26 155.2 17.6 101 62-166 26-139 (249)
61 PF12695 Abhydrolase_5: Alpha/ 99.9 4E-21 8.7E-26 141.2 12.8 144 65-324 1-145 (145)
62 COG0596 MhpC Predicted hydrola 99.9 9.7E-20 2.1E-24 148.3 22.3 267 46-341 8-280 (282)
63 KOG2564 Predicted acetyltransf 99.9 2.5E-21 5.5E-26 146.5 11.7 114 50-168 62-181 (343)
64 PRK07868 acyl-CoA synthetase; 99.9 7E-20 1.5E-24 173.0 22.5 260 62-343 66-361 (994)
65 PRK11460 putative hydrolase; P 99.8 1.8E-19 4E-24 141.8 16.8 172 60-340 13-209 (232)
66 COG0429 Predicted hydrolase of 99.8 3.3E-19 7.2E-24 139.6 17.6 277 37-343 49-340 (345)
67 KOG4667 Predicted esterase [Li 99.8 2.6E-19 5.7E-24 130.4 15.8 222 62-341 32-256 (269)
68 COG2021 MET2 Homoserine acetyl 99.8 1.8E-18 3.8E-23 138.0 21.8 287 46-342 34-367 (368)
69 TIGR02821 fghA_ester_D S-formy 99.8 1.2E-18 2.6E-23 141.3 19.2 122 46-169 23-173 (275)
70 TIGR03101 hydr2_PEP hydrolase, 99.8 2.9E-19 6.2E-24 141.6 14.1 123 41-169 4-134 (266)
71 PF03096 Ndr: Ndr family; Int 99.8 4E-18 8.6E-23 132.7 18.1 264 40-343 2-279 (283)
72 COG3208 GrsT Predicted thioest 99.8 3.8E-18 8.2E-23 128.4 17.3 220 61-342 5-235 (244)
73 KOG1838 Alpha/beta hydrolase [ 99.8 6.2E-17 1.3E-21 131.8 23.5 262 35-328 91-367 (409)
74 PLN02442 S-formylglutathione h 99.8 8.2E-18 1.8E-22 136.6 18.6 120 46-169 28-178 (283)
75 KOG2931 Differentiation-relate 99.8 1.2E-16 2.7E-21 122.4 22.3 274 37-343 22-306 (326)
76 COG1506 DAP2 Dipeptidyl aminop 99.8 8.3E-18 1.8E-22 150.7 18.6 232 36-342 364-615 (620)
77 PF06342 DUF1057: Alpha/beta h 99.8 1.2E-16 2.7E-21 122.7 19.1 113 51-170 24-138 (297)
78 PF00326 Peptidase_S9: Prolyl 99.7 1.1E-16 2.4E-21 125.3 14.1 185 87-343 7-209 (213)
79 TIGR01840 esterase_phb esteras 99.7 3.1E-16 6.7E-21 122.3 16.5 107 62-169 12-130 (212)
80 PLN00021 chlorophyllase 99.7 2.2E-16 4.7E-21 128.8 16.1 116 49-169 38-166 (313)
81 PF06500 DUF1100: Alpha/beta h 99.7 9.6E-16 2.1E-20 126.0 19.1 131 36-170 164-297 (411)
82 TIGR01839 PHA_synth_II poly(R) 99.7 1.3E-15 2.7E-20 130.2 17.6 109 61-173 213-332 (560)
83 PF01738 DLH: Dienelactone hyd 99.7 5.4E-16 1.2E-20 121.7 13.6 175 61-342 12-216 (218)
84 PF02230 Abhydrolase_2: Phosph 99.7 8.7E-16 1.9E-20 120.1 14.3 179 58-342 9-214 (216)
85 COG2945 Predicted hydrolase of 99.7 5.7E-15 1.2E-19 106.3 15.8 172 60-341 25-205 (210)
86 TIGR03230 lipo_lipase lipoprot 99.7 4.5E-16 9.8E-21 130.6 11.7 106 62-171 40-156 (442)
87 TIGR00976 /NonD putative hydro 99.7 6.2E-15 1.4E-19 131.1 19.2 125 43-170 2-133 (550)
88 PRK10162 acetyl esterase; Prov 99.6 5.3E-14 1.1E-18 116.4 20.5 128 38-170 58-196 (318)
89 PF06821 Ser_hydrolase: Serine 99.6 2.1E-15 4.6E-20 111.7 10.8 155 66-328 1-157 (171)
90 cd00707 Pancreat_lipase_like P 99.6 7.4E-16 1.6E-20 124.1 9.0 119 46-171 23-149 (275)
91 TIGR01849 PHB_depoly_PhaZ poly 99.6 6.4E-14 1.4E-18 116.5 19.6 268 63-342 102-405 (406)
92 COG0412 Dienelactone hydrolase 99.6 1.3E-13 2.8E-18 108.1 18.3 194 41-343 6-233 (236)
93 COG3458 Acetyl esterase (deace 99.6 3.9E-14 8.5E-19 107.6 14.4 230 39-342 58-316 (321)
94 KOG2624 Triglyceride lipase-ch 99.6 5.4E-14 1.2E-18 116.6 16.2 135 33-169 44-199 (403)
95 COG0400 Predicted esterase [Ge 99.6 2.7E-14 5.8E-19 108.1 12.8 105 60-169 15-134 (207)
96 PF05448 AXE1: Acetyl xylan es 99.6 6E-14 1.3E-18 114.7 15.6 234 37-341 56-318 (320)
97 PF00975 Thioesterase: Thioest 99.6 1.1E-13 2.4E-18 109.8 16.4 101 64-169 1-104 (229)
98 KOG2565 Predicted hydrolases o 99.6 4E-14 8.7E-19 112.2 13.0 119 46-168 132-263 (469)
99 PF12146 Hydrolase_4: Putative 99.6 6.7E-15 1.4E-19 93.6 7.0 77 47-128 1-79 (79)
100 PRK10115 protease 2; Provision 99.6 2.3E-13 5E-18 123.1 18.5 131 35-170 414-560 (686)
101 PF05728 UPF0227: Uncharacteri 99.6 3.1E-13 6.7E-18 101.2 14.9 89 66-170 2-92 (187)
102 PF10230 DUF2305: Uncharacteri 99.5 1.7E-12 3.8E-17 103.9 19.6 106 63-171 2-124 (266)
103 PF08538 DUF1749: Protein of u 99.5 6.7E-14 1.4E-18 110.5 10.6 102 62-170 32-149 (303)
104 TIGR03502 lipase_Pla1_cef extr 99.5 1.1E-13 2.3E-18 123.7 11.6 110 41-154 421-575 (792)
105 PF02129 Peptidase_S15: X-Pro 99.5 1.5E-13 3.3E-18 111.4 10.7 124 46-171 1-138 (272)
106 COG4757 Predicted alpha/beta h 99.5 7.5E-13 1.6E-17 98.3 11.6 122 40-168 8-137 (281)
107 PF02273 Acyl_transf_2: Acyl t 99.4 4.9E-11 1.1E-15 89.6 18.6 124 40-170 5-135 (294)
108 COG3243 PhaC Poly(3-hydroxyalk 99.4 6.2E-12 1.3E-16 102.3 14.6 108 62-173 106-221 (445)
109 PF10503 Esterase_phd: Esteras 99.4 3.7E-11 8E-16 92.2 16.1 117 51-168 2-131 (220)
110 PF07859 Abhydrolase_3: alpha/ 99.4 1.4E-11 3E-16 96.4 14.2 96 66-170 1-111 (211)
111 COG3545 Predicted esterase of 99.4 7E-11 1.5E-15 84.5 15.7 171 64-342 3-178 (181)
112 PTZ00472 serine carboxypeptida 99.4 1.9E-10 4.2E-15 99.3 21.3 130 38-170 48-217 (462)
113 COG3571 Predicted hydrolase of 99.4 1.1E-10 2.4E-15 81.6 15.7 103 63-168 14-123 (213)
114 PF09752 DUF2048: Uncharacteri 99.4 1.2E-10 2.6E-15 93.7 17.7 240 61-341 90-347 (348)
115 PRK10252 entF enterobactin syn 99.4 3.5E-11 7.5E-16 119.0 17.7 100 63-168 1068-1170(1296)
116 COG0657 Aes Esterase/lipase [L 99.4 2.7E-10 5.9E-15 94.6 20.2 120 46-170 60-192 (312)
117 PRK05371 x-prolyl-dipeptidyl a 99.3 7E-11 1.5E-15 107.9 17.2 82 88-169 273-373 (767)
118 KOG2100 Dipeptidyl aminopeptid 99.3 1.3E-10 2.8E-15 105.9 16.4 225 38-341 499-745 (755)
119 PF12740 Chlorophyllase2: Chlo 99.3 2.4E-10 5.3E-15 88.9 14.5 108 57-169 11-131 (259)
120 PF03959 FSH1: Serine hydrolas 99.3 6.6E-11 1.4E-15 91.9 11.3 162 62-328 3-205 (212)
121 KOG3043 Predicted hydrolase re 99.3 9E-11 1.9E-15 87.1 11.3 162 53-326 31-211 (242)
122 PF06028 DUF915: Alpha/beta hy 99.3 2.2E-10 4.8E-15 90.1 14.1 104 62-170 10-144 (255)
123 COG4099 Predicted peptidase [G 99.3 1.4E-10 3.1E-15 89.6 12.4 116 45-168 169-303 (387)
124 KOG2281 Dipeptidyl aminopeptid 99.2 1.2E-09 2.7E-14 93.1 16.6 228 38-342 614-866 (867)
125 KOG4627 Kynurenine formamidase 99.2 3E-10 6.4E-15 83.0 11.2 203 49-340 55-268 (270)
126 KOG1515 Arylacetamide deacetyl 99.2 2.5E-08 5.4E-13 81.6 23.5 126 39-170 63-208 (336)
127 PF07819 PGAP1: PGAP1-like pro 99.2 2.3E-10 4.9E-15 89.2 10.6 103 62-169 3-123 (225)
128 PF11339 DUF3141: Protein of u 99.2 3.7E-09 8E-14 88.6 16.8 77 93-173 99-179 (581)
129 PF08840 BAAT_C: BAAT / Acyl-C 99.2 3.5E-10 7.6E-15 87.7 10.1 48 121-169 7-56 (213)
130 PF03403 PAF-AH_p_II: Platelet 99.2 5.1E-10 1.1E-14 94.1 11.8 101 62-168 99-261 (379)
131 KOG2551 Phospholipase/carboxyh 99.1 2E-09 4.4E-14 80.1 12.8 58 283-341 162-222 (230)
132 PF07224 Chlorophyllase: Chlor 99.1 2.8E-09 6E-14 81.3 12.5 103 57-170 40-158 (307)
133 COG3319 Thioesterase domains o 99.1 1.2E-08 2.5E-13 80.2 16.4 100 64-169 1-103 (257)
134 KOG3975 Uncharacterized conser 99.1 2.8E-08 6.2E-13 75.2 16.8 106 61-169 27-147 (301)
135 PF06057 VirJ: Bacterial virul 99.1 3.3E-09 7.2E-14 77.9 11.2 97 64-169 3-107 (192)
136 PRK04940 hypothetical protein; 99.1 9.8E-09 2.1E-13 75.4 13.4 87 66-170 2-93 (180)
137 KOG2112 Lysophospholipase [Lip 99.0 2.9E-09 6.3E-14 78.8 10.1 102 63-168 3-127 (206)
138 COG3509 LpqC Poly(3-hydroxybut 99.0 1.8E-08 3.8E-13 78.7 13.5 127 39-169 37-179 (312)
139 PF03583 LIP: Secretory lipase 99.0 2E-08 4.4E-13 81.7 14.4 62 283-344 218-286 (290)
140 COG4814 Uncharacterized protei 99.0 1.6E-07 3.5E-12 71.4 17.9 102 64-169 46-176 (288)
141 PF00151 Lipase: Lipase; Inte 99.0 1.1E-09 2.4E-14 90.1 5.9 105 61-171 69-189 (331)
142 PF05677 DUF818: Chlamydia CHL 98.9 1.5E-08 3.3E-13 80.8 11.4 114 39-155 114-236 (365)
143 PF12715 Abhydrolase_7: Abhydr 98.9 1.5E-08 3.3E-13 82.7 11.2 130 37-168 88-259 (390)
144 PF00450 Peptidase_S10: Serine 98.9 2.7E-08 6E-13 86.4 13.8 133 38-170 12-182 (415)
145 COG2936 Predicted acyl esteras 98.9 4.3E-08 9.3E-13 84.4 12.5 131 39-170 21-160 (563)
146 PF05990 DUF900: Alpha/beta hy 98.9 2.3E-08 5E-13 78.5 10.0 104 62-169 17-137 (233)
147 PLN02733 phosphatidylcholine-s 98.9 1.9E-08 4.1E-13 85.8 10.0 90 74-169 105-201 (440)
148 COG4188 Predicted dienelactone 98.8 8.8E-09 1.9E-13 83.4 7.1 91 62-157 70-182 (365)
149 PLN03016 sinapoylglucose-malat 98.8 1E-06 2.2E-11 75.6 19.3 134 37-170 37-211 (433)
150 smart00824 PKS_TE Thioesterase 98.8 1.6E-07 3.4E-12 73.5 13.5 95 68-168 2-101 (212)
151 PF01674 Lipase_2: Lipase (cla 98.8 7.8E-09 1.7E-13 79.4 5.7 85 64-154 2-95 (219)
152 KOG4840 Predicted hydrolases o 98.8 3.7E-08 8.1E-13 73.2 8.8 101 63-170 36-145 (299)
153 KOG1553 Predicted alpha/beta h 98.8 9.5E-08 2.1E-12 75.9 10.8 124 38-168 215-344 (517)
154 PLN02606 palmitoyl-protein thi 98.7 2.3E-06 5E-11 68.1 17.7 101 64-169 27-132 (306)
155 PF12048 DUF3530: Protein of u 98.7 1.7E-05 3.7E-10 65.2 22.6 106 61-168 85-228 (310)
156 PLN02209 serine carboxypeptida 98.7 2.3E-05 5E-10 67.4 23.2 133 38-170 40-213 (437)
157 KOG3847 Phospholipase A2 (plat 98.6 4.6E-07 9.9E-12 71.2 10.8 102 62-168 117-274 (399)
158 PRK10439 enterobactin/ferric e 98.6 6.1E-06 1.3E-10 70.6 16.4 118 47-168 191-322 (411)
159 COG1075 LipA Predicted acetylt 98.5 3.3E-07 7.1E-12 76.3 7.8 100 63-168 59-163 (336)
160 COG3150 Predicted esterase [Ge 98.5 4.6E-07 9.9E-12 64.4 6.7 90 66-169 2-91 (191)
161 PF05577 Peptidase_S28: Serine 98.5 1.8E-06 4E-11 75.2 11.9 107 63-170 29-149 (434)
162 KOG1282 Serine carboxypeptidas 98.5 8.7E-05 1.9E-09 63.5 21.2 135 37-171 44-215 (454)
163 PF08386 Abhydrolase_4: TAP-li 98.5 7.1E-07 1.5E-11 60.3 7.2 61 284-344 34-95 (103)
164 PF10340 DUF2424: Protein of u 98.4 4.1E-05 9E-10 63.4 17.4 105 61-171 120-237 (374)
165 KOG3253 Predicted alpha/beta h 98.4 3.5E-06 7.5E-11 72.3 11.0 43 284-326 304-347 (784)
166 PF05057 DUF676: Putative seri 98.4 1.1E-06 2.5E-11 68.5 7.5 89 62-153 3-97 (217)
167 PLN02633 palmitoyl protein thi 98.4 6E-05 1.3E-09 60.3 16.7 100 63-169 25-131 (314)
168 PF00756 Esterase: Putative es 98.4 1.2E-06 2.6E-11 70.5 7.5 122 47-169 5-150 (251)
169 KOG3101 Esterase D [General fu 98.4 3.3E-06 7.2E-11 62.5 8.7 122 47-170 25-177 (283)
170 PF05705 DUF829: Eukaryotic pr 98.4 2.1E-05 4.6E-10 62.7 13.9 57 284-340 178-240 (240)
171 KOG1551 Uncharacterized conser 98.3 3E-05 6.6E-10 59.7 13.6 57 287-344 309-367 (371)
172 PF04301 DUF452: Protein of un 98.3 1.1E-05 2.4E-10 61.4 11.4 79 63-169 11-90 (213)
173 PF02089 Palm_thioest: Palmito 98.3 5.2E-06 1.1E-10 65.7 9.0 103 62-168 4-115 (279)
174 COG1505 Serine proteases of th 98.3 3.8E-06 8.2E-11 72.2 8.4 134 33-170 390-536 (648)
175 COG4782 Uncharacterized protei 98.2 7.1E-06 1.5E-10 66.4 8.5 105 62-170 115-235 (377)
176 KOG2183 Prolylcarboxypeptidase 98.2 9.2E-05 2E-09 61.0 13.9 108 64-171 81-204 (492)
177 KOG3724 Negative regulator of 98.2 4E-05 8.8E-10 68.1 12.5 121 43-168 63-219 (973)
178 cd00312 Esterase_lipase Estera 98.1 1.5E-05 3.2E-10 71.0 9.3 108 61-170 93-214 (493)
179 KOG2237 Predicted serine prote 98.0 0.0001 2.2E-09 64.2 11.9 130 37-170 441-585 (712)
180 PF11144 DUF2920: Protein of u 98.0 0.00074 1.6E-08 56.4 16.2 36 134-169 184-219 (403)
181 COG1073 Hydrolases of the alph 97.9 5.8E-06 1.2E-10 68.4 2.9 59 285-343 233-297 (299)
182 COG2272 PnbA Carboxylesterase 97.9 6.3E-05 1.4E-09 63.8 8.6 118 50-170 80-218 (491)
183 KOG2541 Palmitoyl protein thio 97.9 0.00024 5.2E-09 55.1 10.5 98 64-168 24-127 (296)
184 PF00135 COesterase: Carboxyle 97.8 0.00014 3.1E-09 65.6 10.2 105 62-169 124-245 (535)
185 PF02450 LCAT: Lecithin:choles 97.8 8.5E-05 1.8E-09 63.5 7.3 111 42-169 34-160 (389)
186 PF04083 Abhydro_lipase: Parti 97.7 9E-05 1.9E-09 44.5 4.9 47 34-80 9-60 (63)
187 COG0627 Predicted esterase [Ge 97.7 0.00022 4.8E-09 58.4 8.5 109 62-171 53-189 (316)
188 KOG2182 Hydrolytic enzymes of 97.7 0.00028 6E-09 59.8 9.1 109 62-170 85-208 (514)
189 COG1770 PtrB Protease II [Amin 97.7 0.0027 5.8E-08 56.1 15.1 125 42-170 424-563 (682)
190 PLN02213 sinapoylglucose-malat 97.7 0.003 6.6E-08 52.6 14.5 59 285-343 234-317 (319)
191 COG2382 Fes Enterochelin ester 97.6 0.0019 4.2E-08 51.5 12.4 105 61-169 96-212 (299)
192 PF10142 PhoPQ_related: PhoPQ- 97.6 0.00077 1.7E-08 56.3 10.8 57 284-342 262-319 (367)
193 COG4553 DepA Poly-beta-hydroxy 97.5 0.0023 4.9E-08 50.5 10.7 109 57-171 97-211 (415)
194 PF06259 Abhydrolase_8: Alpha/ 97.4 0.0046 1E-07 46.1 11.5 117 51-168 8-143 (177)
195 KOG3967 Uncharacterized conser 97.4 0.0017 3.6E-08 48.7 8.8 106 62-169 100-227 (297)
196 cd00741 Lipase Lipase. Lipase 97.3 0.00078 1.7E-08 49.5 6.5 51 117-168 8-66 (153)
197 COG2819 Predicted hydrolase of 97.3 0.0034 7.5E-08 49.4 10.1 36 134-169 137-172 (264)
198 COG2939 Carboxypeptidase C (ca 97.2 0.0019 4.2E-08 55.2 8.4 114 51-169 89-236 (498)
199 PF01764 Lipase_3: Lipase (cla 97.1 0.0017 3.7E-08 46.9 6.4 38 118-156 49-86 (140)
200 PF07082 DUF1350: Protein of u 96.9 0.0043 9.4E-08 48.3 6.8 98 62-167 16-123 (250)
201 PF01083 Cutinase: Cutinase; 96.8 0.0096 2.1E-07 44.9 8.3 103 65-168 7-121 (179)
202 PF11288 DUF3089: Protein of u 96.8 0.0032 6.9E-08 47.9 5.4 41 115-155 76-116 (207)
203 PF11187 DUF2974: Protein of u 96.6 0.0067 1.5E-07 47.4 6.4 47 120-168 72-122 (224)
204 KOG2521 Uncharacterized conser 96.6 0.11 2.5E-06 43.2 13.5 58 287-344 228-291 (350)
205 PF05576 Peptidase_S37: PS-10 96.6 0.0024 5.3E-08 53.2 3.7 102 62-169 62-169 (448)
206 COG3946 VirJ Type IV secretory 96.6 0.013 2.9E-07 48.7 7.8 85 63-156 260-348 (456)
207 PF06441 EHN: Epoxide hydrolas 96.5 0.0037 8E-08 42.6 3.6 36 44-80 74-109 (112)
208 cd00519 Lipase_3 Lipase (class 96.5 0.0069 1.5E-07 48.0 5.6 22 134-155 128-149 (229)
209 KOG1516 Carboxylesterase and r 96.5 0.017 3.8E-07 52.3 8.8 106 63-170 112-233 (545)
210 PLN02517 phosphatidylcholine-s 96.4 0.0063 1.4E-07 53.6 5.4 84 78-169 157-263 (642)
211 KOG2369 Lecithin:cholesterol a 96.3 0.0071 1.5E-07 51.4 4.7 86 78-168 125-224 (473)
212 PLN02162 triacylglycerol lipas 95.9 0.022 4.9E-07 48.8 6.1 35 118-153 263-297 (475)
213 PLN00413 triacylglycerol lipas 95.9 0.026 5.6E-07 48.5 6.4 35 118-153 269-303 (479)
214 KOG1202 Animal-type fatty acid 95.8 0.32 6.9E-06 46.9 13.2 96 61-170 2121-2220(2376)
215 PLN02454 triacylglycerol lipas 95.8 0.024 5.2E-07 48.1 5.6 20 135-154 229-248 (414)
216 PLN02571 triacylglycerol lipas 95.7 0.017 3.8E-07 48.9 4.6 38 117-154 208-246 (413)
217 KOG4372 Predicted alpha/beta h 95.5 0.024 5.1E-07 47.4 4.8 84 62-152 79-168 (405)
218 PLN02408 phospholipase A1 95.2 0.035 7.7E-07 46.4 4.7 38 119-156 184-222 (365)
219 PLN02310 triacylglycerol lipas 95.1 0.038 8.1E-07 46.9 4.8 38 117-154 189-229 (405)
220 PLN02934 triacylglycerol lipas 95.1 0.04 8.7E-07 47.8 4.9 36 117-153 305-340 (515)
221 KOG1283 Serine carboxypeptidas 94.9 0.31 6.8E-06 39.5 9.0 128 41-170 7-167 (414)
222 PLN03037 lipase class 3 family 94.6 0.057 1.2E-06 47.0 4.7 37 118-154 299-338 (525)
223 COG2830 Uncharacterized protei 94.5 0.4 8.7E-06 34.6 7.9 78 64-169 12-90 (214)
224 COG4287 PqaA PhoPQ-activated p 94.5 0.34 7.3E-06 40.2 8.4 57 283-341 328-385 (507)
225 PLN02324 triacylglycerol lipas 94.5 0.063 1.4E-06 45.6 4.5 36 119-154 199-235 (415)
226 PF05277 DUF726: Protein of un 94.4 0.15 3.3E-06 42.5 6.5 36 134-169 220-260 (345)
227 PLN02753 triacylglycerol lipas 94.3 0.077 1.7E-06 46.3 4.8 37 118-154 292-332 (531)
228 PLN02802 triacylglycerol lipas 94.2 0.08 1.7E-06 46.0 4.7 37 119-155 314-351 (509)
229 KOG4388 Hormone-sensitive lipa 94.0 0.14 3.1E-06 45.0 5.8 112 52-168 385-507 (880)
230 PF07519 Tannase: Tannase and 94.0 0.85 1.8E-05 40.4 10.7 61 284-344 353-428 (474)
231 PLN02761 lipase class 3 family 93.9 0.1 2.2E-06 45.6 4.8 37 118-154 273-314 (527)
232 PF06850 PHB_depo_C: PHB de-po 93.7 0.14 3E-06 38.4 4.4 57 286-342 136-201 (202)
233 PLN02719 triacylglycerol lipas 93.7 0.12 2.6E-06 45.1 4.7 36 119-154 279-318 (518)
234 COG4947 Uncharacterized protei 93.1 0.14 3E-06 37.4 3.5 115 47-170 14-137 (227)
235 PLN02847 triacylglycerol lipas 92.6 0.22 4.8E-06 44.3 4.8 21 134-154 251-271 (633)
236 PF08237 PE-PPE: PE-PPE domain 92.5 0.75 1.6E-05 36.1 7.3 62 94-155 2-69 (225)
237 TIGR03712 acc_sec_asp2 accesso 92.5 7 0.00015 34.3 16.4 119 41-169 269-390 (511)
238 KOG4569 Predicted lipase [Lipi 92.3 0.25 5.3E-06 41.6 4.6 37 117-154 155-191 (336)
239 COG5153 CVT17 Putative lipase 88.3 1.3 2.7E-05 35.6 5.0 45 122-168 264-308 (425)
240 KOG4540 Putative lipase essent 88.3 1.3 2.7E-05 35.6 5.0 45 122-168 264-308 (425)
241 TIGR01626 ytfJ_HI0045 conserve 88.1 9.5 0.00021 28.9 9.5 98 39-151 37-141 (184)
242 PF09949 DUF2183: Uncharacteri 88.0 5 0.00011 26.9 7.1 80 84-164 14-97 (100)
243 PF07519 Tannase: Tannase and 87.7 1.2 2.6E-05 39.5 5.3 116 49-171 16-152 (474)
244 KOG2029 Uncharacterized conser 86.3 1.6 3.4E-05 39.0 5.0 54 115-168 505-571 (697)
245 COG4822 CbiK Cobalamin biosynt 84.0 6.3 0.00014 30.2 6.6 63 61-139 136-199 (265)
246 PRK13728 conjugal transfer pro 80.4 16 0.00035 27.6 7.8 58 38-106 54-111 (181)
247 PF09994 DUF2235: Uncharacteri 79.7 14 0.00031 30.3 8.0 30 125-154 83-112 (277)
248 KOG4389 Acetylcholinesterase/B 77.2 8.8 0.00019 33.8 6.1 123 50-177 121-263 (601)
249 KOG2385 Uncharacterized conser 72.6 9.5 0.00021 33.7 5.2 39 131-170 445-488 (633)
250 PRK12467 peptide synthase; Pro 71.2 14 0.00031 42.6 7.7 98 63-166 3692-3792(3956)
251 PRK02399 hypothetical protein; 70.8 56 0.0012 28.3 9.3 97 64-165 4-128 (406)
252 PF05576 Peptidase_S37: PS-10 69.6 5.3 0.00011 34.2 3.1 52 287-340 354-411 (448)
253 PF08139 LPAM_1: Prokaryotic m 69.5 4.1 8.9E-05 19.2 1.4 15 1-15 6-20 (25)
254 PF00698 Acyl_transf_1: Acyl t 68.1 3.9 8.4E-05 34.3 2.1 30 123-153 74-103 (318)
255 smart00827 PKS_AT Acyl transfe 68.0 6.3 0.00014 32.6 3.4 30 123-153 72-101 (298)
256 PRK14582 pgaB outer membrane N 67.7 44 0.00094 31.4 8.7 62 75-140 70-141 (671)
257 PLN02748 tRNA dimethylallyltra 67.2 20 0.00044 31.8 6.3 77 61-142 19-120 (468)
258 PF06792 UPF0261: Uncharacteri 66.9 79 0.0017 27.5 9.4 97 65-166 3-127 (403)
259 cd01714 ETF_beta The electron 65.2 26 0.00056 27.1 6.0 65 93-165 75-145 (202)
260 TIGR03131 malonate_mdcH malona 64.8 7.9 0.00017 32.0 3.3 30 123-153 66-95 (295)
261 PRK03147 thiol-disulfide oxido 62.2 34 0.00073 25.4 6.1 57 39-103 43-103 (173)
262 cd07225 Pat_PNPLA6_PNPLA7 Pata 61.0 10 0.00022 31.5 3.3 32 123-155 33-64 (306)
263 PRK10279 hypothetical protein; 60.5 11 0.00025 31.2 3.5 33 123-156 23-55 (300)
264 cd07198 Patatin Patatin-like p 60.1 11 0.00025 28.1 3.2 32 123-155 16-47 (172)
265 PRK14581 hmsF outer membrane N 59.6 84 0.0018 29.6 8.9 63 75-141 70-142 (672)
266 TIGR00128 fabD malonyl CoA-acy 58.8 11 0.00023 31.1 3.1 28 125-153 74-102 (290)
267 cd07210 Pat_hypo_W_succinogene 58.1 14 0.00031 29.0 3.5 30 125-155 20-49 (221)
268 COG2069 CdhD CO dehydrogenase/ 58.1 1.1E+02 0.0023 25.3 8.5 52 87-143 157-208 (403)
269 cd07207 Pat_ExoU_VipD_like Exo 57.0 14 0.0003 28.3 3.2 30 125-155 19-48 (194)
270 COG0482 TrmU Predicted tRNA(5- 56.8 35 0.00075 29.0 5.6 52 85-139 18-69 (356)
271 COG3933 Transcriptional antite 56.4 63 0.0014 28.3 7.0 75 64-153 110-184 (470)
272 PF10605 3HBOH: 3HB-oligomer h 55.4 9.7 0.00021 34.4 2.3 37 135-171 286-323 (690)
273 COG1752 RssA Predicted esteras 55.3 14 0.0003 30.8 3.2 32 123-155 29-60 (306)
274 cd07227 Pat_Fungal_NTE1 Fungal 55.2 17 0.00036 29.7 3.5 31 123-154 28-58 (269)
275 PF11713 Peptidase_C80: Peptid 55.2 8.9 0.00019 28.2 1.8 49 98-146 57-116 (157)
276 COG3673 Uncharacterized conser 55.1 33 0.00072 28.5 5.0 93 62-154 30-142 (423)
277 PF06309 Torsin: Torsin; Inte 54.4 12 0.00027 26.2 2.3 20 61-80 50-69 (127)
278 PF00326 Peptidase_S9: Prolyl 53.3 19 0.00042 27.9 3.6 64 62-129 143-208 (213)
279 PF10081 Abhydrolase_9: Alpha/ 52.6 30 0.00066 28.2 4.4 52 118-169 91-147 (289)
280 PRK09810 entericidin A; Provis 51.9 19 0.0004 19.5 2.2 13 1-13 1-13 (41)
281 COG0529 CysC Adenylylsulfate k 50.7 48 0.001 25.1 4.9 62 62-126 21-84 (197)
282 cd07228 Pat_NTE_like_bacteria 50.4 22 0.00048 26.7 3.4 29 126-155 21-49 (175)
283 PF00448 SRP54: SRP54-type pro 49.9 1.2E+02 0.0026 23.4 7.4 65 94-166 83-149 (196)
284 PF10686 DUF2493: Protein of u 49.4 38 0.00082 21.0 3.7 32 63-100 31-63 (71)
285 PRK11627 hypothetical protein; 48.9 74 0.0016 24.4 5.9 19 1-19 1-19 (192)
286 cd07209 Pat_hypo_Ecoli_Z1214_l 48.3 23 0.00049 27.8 3.2 33 123-156 16-48 (215)
287 KOG2872 Uroporphyrinogen decar 48.2 59 0.0013 26.6 5.3 69 63-142 252-336 (359)
288 PRK06731 flhF flagellar biosyn 48.0 1.4E+02 0.003 24.5 7.6 64 94-165 154-219 (270)
289 PRK00091 miaA tRNA delta(2)-is 47.1 57 0.0012 27.3 5.5 72 63-139 3-99 (307)
290 cd07230 Pat_TGL4-5_like Triacy 46.9 11 0.00025 32.9 1.5 35 124-159 92-126 (421)
291 COG1073 Hydrolases of the alph 46.6 98 0.0021 25.1 7.0 88 62-156 48-154 (299)
292 PRK11901 hypothetical protein; 46.6 32 0.0007 28.6 3.8 30 1-30 38-67 (327)
293 COG2939 Carboxypeptidase C (ca 46.1 24 0.00051 31.3 3.2 57 286-342 427-490 (498)
294 PRK14974 cell division protein 45.9 1.7E+02 0.0038 24.9 8.2 67 92-166 220-288 (336)
295 TIGR02816 pfaB_fam PfaB family 45.8 22 0.00048 32.3 3.1 31 124-155 255-286 (538)
296 PF12242 Eno-Rase_NADH_b: NAD( 45.7 57 0.0012 20.6 3.9 22 134-155 40-61 (78)
297 cd07205 Pat_PNPLA6_PNPLA7_NTE1 45.6 38 0.00082 25.4 4.0 29 125-154 20-48 (175)
298 PF00004 AAA: ATPase family as 45.2 46 0.00099 23.1 4.2 53 67-130 1-53 (132)
299 COG1448 TyrB Aspartate/tyrosin 44.8 1.3E+02 0.0028 26.0 7.0 87 63-168 171-264 (396)
300 PF03283 PAE: Pectinacetyleste 44.6 94 0.002 26.7 6.5 36 133-168 155-194 (361)
301 cd07229 Pat_TGL3_like Triacylg 44.5 15 0.00032 31.7 1.8 40 123-163 101-140 (391)
302 cd07232 Pat_PLPL Patain-like p 43.9 14 0.00031 32.2 1.6 37 125-162 87-123 (407)
303 PF03054 tRNA_Me_trans: tRNA m 43.0 26 0.00056 29.9 2.9 54 84-139 14-68 (356)
304 cd07231 Pat_SDP1-like Sugar-De 42.3 16 0.00034 30.5 1.5 32 125-157 88-119 (323)
305 KOG0781 Signal recognition par 42.0 73 0.0016 28.4 5.3 89 67-166 442-539 (587)
306 PRK05282 (alpha)-aspartyl dipe 41.9 1.2E+02 0.0026 24.2 6.3 38 63-103 31-70 (233)
307 TIGR00521 coaBC_dfp phosphopan 41.7 1.6E+02 0.0034 25.8 7.5 73 64-141 113-193 (390)
308 PLN02840 tRNA dimethylallyltra 41.6 1.1E+02 0.0023 27.0 6.4 75 63-142 20-119 (421)
309 COG3340 PepE Peptidase E [Amin 41.3 89 0.0019 24.4 5.2 37 63-102 32-70 (224)
310 PF14253 AbiH: Bacteriophage a 41.2 33 0.00071 27.9 3.3 22 125-146 226-247 (270)
311 cd03146 GAT1_Peptidase_E Type 40.9 1.5E+02 0.0032 23.2 6.7 83 62-150 30-129 (212)
312 PRK10081 entericidin B membran 40.1 39 0.00084 19.0 2.3 13 1-13 1-13 (48)
313 COG0324 MiaA tRNA delta(2)-iso 39.5 98 0.0021 25.9 5.6 74 64-142 3-101 (308)
314 PRK14729 miaA tRNA delta(2)-is 39.0 96 0.0021 25.9 5.6 72 65-142 5-101 (300)
315 PF13207 AAA_17: AAA domain; P 38.9 39 0.00084 23.2 3.0 32 66-102 1-32 (121)
316 COG5441 Uncharacterized conser 38.6 2.3E+02 0.005 23.5 7.4 96 65-164 3-123 (401)
317 COG3056 Uncharacterized lipopr 38.4 58 0.0013 24.5 3.7 32 63-97 77-108 (204)
318 COG0218 Predicted GTPase [Gene 37.5 41 0.00089 25.9 3.0 17 287-303 138-154 (200)
319 cd07208 Pat_hypo_Ecoli_yjju_li 37.3 43 0.00094 27.2 3.4 31 126-157 19-50 (266)
320 COG3887 Predicted signaling pr 36.9 94 0.002 28.5 5.4 49 116-168 323-377 (655)
321 PF02230 Abhydrolase_2: Phosph 36.9 62 0.0014 25.2 4.2 60 63-129 155-214 (216)
322 cd07211 Pat_PNPLA8 Patatin-lik 36.6 90 0.0019 26.1 5.2 17 137-153 44-60 (308)
323 PRK14194 bifunctional 5,10-met 36.3 68 0.0015 26.7 4.3 35 120-154 143-182 (301)
324 PLN03059 beta-galactosidase; P 36.2 1.8E+02 0.004 28.2 7.4 76 69-151 51-136 (840)
325 COG1576 Uncharacterized conser 36.1 1.1E+02 0.0025 22.4 4.8 48 94-150 67-114 (155)
326 KOG3551 Syntrophins (type beta 35.9 42 0.00091 28.6 3.0 43 33-75 447-497 (506)
327 PF08484 Methyltransf_14: C-me 35.8 62 0.0013 24.0 3.7 51 117-167 51-102 (160)
328 cd07224 Pat_like Patatin-like 34.0 52 0.0011 26.2 3.3 31 125-155 19-50 (233)
329 cd07212 Pat_PNPLA9 Patatin-lik 33.3 67 0.0014 27.0 3.9 19 137-155 35-53 (312)
330 cd05312 NAD_bind_1_malic_enz N 32.9 1.5E+02 0.0033 24.3 5.7 81 67-153 28-125 (279)
331 PF13728 TraF: F plasmid trans 32.6 1.3E+02 0.0029 23.6 5.2 45 64-111 123-167 (215)
332 PRK05579 bifunctional phosphop 32.3 3.5E+02 0.0076 23.8 9.3 75 63-141 116-196 (399)
333 PF05577 Peptidase_S28: Serine 32.3 43 0.00092 29.6 2.8 38 287-327 379-416 (434)
334 COG1506 DAP2 Dipeptidyl aminop 31.9 1.4E+02 0.003 28.1 6.1 47 62-109 550-598 (620)
335 COG1598 Predicted nuclease of 31.3 1E+02 0.0022 19.2 3.6 33 92-128 13-45 (73)
336 PRK11613 folP dihydropteroate 30.9 2.4E+02 0.0052 23.3 6.6 50 92-148 174-225 (282)
337 PF10855 DUF2648: Protein of u 30.7 22 0.00048 17.7 0.4 19 2-20 1-19 (33)
338 cd07204 Pat_PNPLA_like Patatin 30.6 70 0.0015 25.6 3.5 19 137-155 34-52 (243)
339 COG0541 Ffh Signal recognition 30.4 3.9E+02 0.0085 23.8 7.8 49 117-166 198-248 (451)
340 PF07380 Pneumo_M2: Pneumoviru 30.1 1.1E+02 0.0024 19.2 3.4 24 114-137 60-83 (89)
341 cd07206 Pat_TGL3-4-5_SDP1 Tria 29.7 56 0.0012 27.1 2.8 26 129-155 93-118 (298)
342 TIGR01663 PNK-3'Pase polynucle 29.2 1.2E+02 0.0027 27.6 5.1 37 62-103 367-403 (526)
343 TIGR01425 SRP54_euk signal rec 28.6 3.4E+02 0.0073 24.2 7.4 64 94-165 182-247 (429)
344 PF10717 ODV-E18: Occlusion-de 28.0 1.3E+02 0.0028 19.3 3.5 18 4-21 30-47 (85)
345 PF02882 THF_DHG_CYH_C: Tetrah 27.9 1.4E+02 0.0029 22.2 4.3 36 119-154 19-59 (160)
346 COG1092 Predicted SAM-dependen 27.8 1.4E+02 0.0031 26.0 5.0 50 94-144 290-339 (393)
347 COG3946 VirJ Type IV secretory 27.8 3.2E+02 0.007 24.0 6.8 80 85-166 67-154 (456)
348 cd00382 beta_CA Carbonic anhyd 27.6 1E+02 0.0022 21.4 3.5 31 118-149 44-74 (119)
349 COG0426 FpaA Uncharacterized f 27.5 1.1E+02 0.0023 26.6 4.1 87 52-159 237-332 (388)
350 PF02590 SPOUT_MTase: Predicte 27.5 1.4E+02 0.003 22.0 4.3 61 94-168 67-127 (155)
351 PF12566 DUF3748: Protein of u 27.5 64 0.0014 22.1 2.3 17 64-80 14-30 (122)
352 PF03610 EIIA-man: PTS system 27.4 2.1E+02 0.0045 19.6 7.6 76 65-153 2-77 (116)
353 PF03490 Varsurf_PPLC: Variant 27.2 76 0.0016 17.9 2.1 30 114-144 6-36 (51)
354 TIGR01361 DAHP_synth_Bsub phos 27.1 3.5E+02 0.0075 22.1 7.9 74 62-144 131-206 (260)
355 PF03681 UPF0150: Uncharacteri 26.8 61 0.0013 17.9 1.9 33 92-128 11-43 (48)
356 COG5353 Uncharacterized protei 26.6 89 0.0019 22.6 2.9 29 41-70 56-84 (161)
357 COG3657 Uncharacterized protei 26.3 1.5E+02 0.0031 19.6 3.6 38 32-75 45-82 (100)
358 PRK10867 signal recognition pa 26.2 4.7E+02 0.01 23.3 9.3 67 91-165 180-248 (433)
359 cd08769 DAP_dppA_2 Peptidase M 26.1 2E+02 0.0042 23.6 5.2 47 286-338 149-198 (270)
360 PRK14665 mnmA tRNA-specific 2- 26.1 2.4E+02 0.0051 24.4 6.0 56 63-132 6-61 (360)
361 PRK00131 aroK shikimate kinase 25.9 66 0.0014 23.8 2.5 35 63-102 3-37 (175)
362 PF01583 APS_kinase: Adenylyls 25.9 1E+02 0.0022 22.8 3.3 38 63-102 1-38 (156)
363 PRK14179 bifunctional 5,10-met 25.2 1.5E+02 0.0032 24.5 4.4 35 120-154 142-181 (284)
364 COG0331 FabD (acyl-carrier-pro 25.0 74 0.0016 26.7 2.8 20 134-153 85-104 (310)
365 cd07218 Pat_iPLA2 Calcium-inde 24.9 93 0.002 25.0 3.3 20 137-156 33-52 (245)
366 TIGR02873 spore_ylxY probable 24.9 58 0.0013 26.6 2.2 34 64-101 231-264 (268)
367 TIGR00421 ubiX_pad polyprenyl 24.7 2.9E+02 0.0063 21.0 5.7 42 85-132 131-173 (181)
368 PLN03006 carbonate dehydratase 24.6 1.7E+02 0.0038 24.3 4.7 30 119-149 158-187 (301)
369 TIGR02764 spore_ybaN_pdaB poly 24.5 43 0.00092 25.5 1.3 34 64-101 152-188 (191)
370 cd03379 beta_CA_cladeD Carboni 24.4 1.2E+02 0.0027 21.8 3.6 28 118-146 41-68 (142)
371 COG0279 GmhA Phosphoheptose is 24.0 95 0.0021 23.1 2.8 71 67-146 44-121 (176)
372 PRK10626 hypothetical protein; 23.8 3.4E+02 0.0073 21.8 5.9 13 1-13 1-13 (239)
373 TIGR00174 miaA tRNA isopenteny 23.8 1.3E+02 0.0029 24.9 4.0 71 67-142 2-97 (287)
374 PRK07313 phosphopantothenoylcy 23.0 2.1E+02 0.0045 21.8 4.7 61 63-127 113-178 (182)
375 PF09419 PGP_phosphatase: Mito 22.8 3.4E+02 0.0073 20.4 6.2 55 90-146 36-90 (168)
376 cd07220 Pat_PNPLA2 Patatin-lik 22.6 1.1E+02 0.0023 24.8 3.2 22 135-156 37-58 (249)
377 PF12641 Flavodoxin_3: Flavodo 22.5 3.2E+02 0.007 20.2 5.5 57 287-343 42-99 (160)
378 cd01014 nicotinamidase_related 22.4 3.1E+02 0.0068 19.9 6.3 48 122-170 89-136 (155)
379 cd07221 Pat_PNPLA3 Patatin-lik 22.4 1.1E+02 0.0024 24.7 3.3 22 135-156 33-54 (252)
380 PRK14188 bifunctional 5,10-met 22.1 1.7E+02 0.0038 24.3 4.4 35 120-154 142-181 (296)
381 PRK13938 phosphoheptose isomer 22.0 2.4E+02 0.0053 21.7 4.9 29 128-156 40-68 (196)
382 PF01171 ATP_bind_3: PP-loop f 22.0 3.5E+02 0.0076 20.3 6.5 80 65-153 32-116 (182)
383 TIGR03707 PPK2_P_aer polyphosp 21.9 3.1E+02 0.0067 21.9 5.5 71 63-146 30-101 (230)
384 PF13580 SIS_2: SIS domain; PD 21.9 2.1E+02 0.0045 20.4 4.3 30 128-157 30-59 (138)
385 PRK00103 rRNA large subunit me 21.7 2.6E+02 0.0057 20.7 4.8 42 95-144 68-109 (157)
386 TIGR02884 spore_pdaA delta-lac 21.5 80 0.0017 24.9 2.3 34 64-101 187-221 (224)
387 cd05007 SIS_Etherase N-acetylm 21.4 2.1E+02 0.0045 23.3 4.6 39 118-156 34-72 (257)
388 KOG4231 Intracellular membrane 21.4 1.2E+02 0.0026 27.2 3.4 51 93-154 415-470 (763)
389 PLN02200 adenylate kinase fami 21.3 1.6E+02 0.0034 23.5 3.9 33 63-100 42-74 (234)
390 PF01972 SDH_sah: Serine dehyd 21.3 4.7E+02 0.01 21.6 7.0 26 123-148 80-105 (285)
391 PF05724 TPMT: Thiopurine S-me 21.2 1.4E+02 0.003 23.5 3.6 30 65-103 39-68 (218)
392 PF07279 DUF1442: Protein of u 21.2 2E+02 0.0042 22.7 4.1 43 123-167 29-77 (218)
393 PRK11889 flhF flagellar biosyn 21.2 5.9E+02 0.013 22.6 7.5 72 86-165 312-385 (436)
394 TIGR03709 PPK2_rel_1 polyphosp 21.1 2.9E+02 0.0063 22.6 5.3 71 63-146 55-126 (264)
395 PF06626 DUF1152: Protein of u 21.0 4.9E+02 0.011 21.8 6.6 45 84-139 80-124 (297)
396 PRK05441 murQ N-acetylmuramic 20.8 2.1E+02 0.0046 23.9 4.7 39 118-156 47-85 (299)
397 TIGR02738 TrbB type-F conjugat 20.7 2.6E+02 0.0056 20.5 4.6 36 66-104 54-90 (153)
398 TIGR02683 upstrm_HI1419 probab 20.5 2.1E+02 0.0047 18.8 3.9 31 38-74 48-78 (95)
399 PF02630 SCO1-SenC: SCO1/SenC; 20.3 1.7E+02 0.0036 22.0 3.7 35 39-79 34-68 (174)
400 cd01520 RHOD_YbbB Member of th 20.1 1.5E+02 0.0032 20.8 3.2 32 62-101 86-118 (128)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=5.5e-36 Score=233.45 Aligned_cols=285 Identities=21% Similarity=0.269 Sum_probs=180.6
Q ss_pred CCcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc-
Q 018952 35 PAITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK- 113 (348)
Q Consensus 35 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~- 113 (348)
...+..+++. +|.+++|.+.|+++ +|.|+++||++.++.+|+ .++..|+.+ ||+|+++|+||+|.|+.|+.
T Consensus 20 ~~~~hk~~~~-~gI~~h~~e~g~~~---gP~illlHGfPe~wyswr---~q~~~la~~-~~rviA~DlrGyG~Sd~P~~~ 91 (322)
T KOG4178|consen 20 SAISHKFVTY-KGIRLHYVEGGPGD---GPIVLLLHGFPESWYSWR---HQIPGLASR-GYRVIAPDLRGYGFSDAPPHI 91 (322)
T ss_pred hhcceeeEEE-ccEEEEEEeecCCC---CCEEEEEccCCccchhhh---hhhhhhhhc-ceEEEecCCCCCCCCCCCCCc
Confidence 3445555555 88999999998754 899999999999999999 999999987 79999999999999998764
Q ss_pred --cchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccc--------cCCCCCccchhh
Q 018952 114 --RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY--------WWPGFPANLTKE 183 (348)
Q Consensus 114 --~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~--------~~~~~~~~~~~~ 183 (348)
|++..++.|+..++++|+. ++++++||+||+++|+.+|..+|++|+++|+++..... ....+......-
T Consensus 92 ~~Yt~~~l~~di~~lld~Lg~-~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~ 170 (322)
T KOG4178|consen 92 SEYTIDELVGDIVALLDHLGL-KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYIC 170 (322)
T ss_pred ceeeHHHHHHHHHHHHHHhcc-ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeE
Confidence 7999999999999999998 99999999999999999999999999999999976541 000000000000
Q ss_pred hhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCccc---ccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHH
Q 018952 184 AYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVV---ARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFR 260 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (348)
.+....... ........+.+......+......... ...+.++..++.+.+..-.... . .....++.+
T Consensus 171 ~fQ~~~~~E--~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~---g----~~gplNyyr 241 (322)
T KOG4178|consen 171 LFQEPGKPE--TELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQID---G----FTGPLNYYR 241 (322)
T ss_pred eccccCcch--hhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccc---c----ccccchhhH
Confidence 000000000 000000000001111111111000000 0011222222222221111100 0 111112222
Q ss_pred HhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChH-HHHHHHhhCCCc-eEEEeCCCCcceeeC-cchHHHHHH
Q 018952 261 DMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVI-LQRYISKKLPWI-RYHEIPGSGHLIADA-DGMTEAIIK 337 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~gH~~~~e-p~~~~~~i~ 337 (348)
++. ..|. ...-.+..+++|+++|+|+.|.+.+.. ..+.+.+..++. +.++++|+||+++.| |+++++.+.
T Consensus 242 n~~---r~w~----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~ 314 (322)
T KOG4178|consen 242 NFR---RNWE----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAIL 314 (322)
T ss_pred HHh---hCch----hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHH
Confidence 221 1221 112234456667999999999998877 455566666776 788999999999998 999999999
Q ss_pred HHhcccc
Q 018952 338 ALLLGEK 344 (348)
Q Consensus 338 ~fl~~~~ 344 (348)
+|+++..
T Consensus 315 ~f~~~~~ 321 (322)
T KOG4178|consen 315 GFINSFS 321 (322)
T ss_pred HHHHhhc
Confidence 9998753
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.2e-36 Score=250.60 Aligned_cols=271 Identities=18% Similarity=0.214 Sum_probs=173.6
Q ss_pred ccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-----
Q 018952 38 TAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP----- 112 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~----- 112 (348)
...++.. +|.+++|...|++ +++|||+||+++++..|. .+++.|.++ |+|+++|+||||.|+.+.
T Consensus 9 ~~~~~~~-~~~~i~y~~~G~~----~~~vlllHG~~~~~~~w~---~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~ 78 (294)
T PLN02824 9 ETRTWRW-KGYNIRYQRAGTS----GPALVLVHGFGGNADHWR---KNTPVLAKS--HRVYAIDLLGYGYSDKPNPRSAP 78 (294)
T ss_pred CCceEEE-cCeEEEEEEcCCC----CCeEEEECCCCCChhHHH---HHHHHHHhC--CeEEEEcCCCCCCCCCCcccccc
Confidence 3455665 8999999998852 479999999999999999 999999876 799999999999998642
Q ss_pred ---ccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccccc-CCCCCccch--hhhhh
Q 018952 113 ---KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYW-WPGFPANLT--KEAYY 186 (348)
Q Consensus 113 ---~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~-~~~~~~~~~--~~~~~ 186 (348)
.++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++..... ....+.... ...+.
T Consensus 79 ~~~~~~~~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PLN02824 79 PNSFYTFETWGEQLNDFCSDVVG-DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQ 157 (294)
T ss_pred ccccCCHHHHHHHHHHHHHHhcC-CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHH
Confidence 36899999999999999999 899999999999999999999999999999999754211 000000000 00000
Q ss_pred cccchhHHHHHH-hh-hchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhh
Q 018952 187 LQLPQDQWALRV-AH-YAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMI 264 (348)
Q Consensus 187 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (348)
............ .. ............ .+. ..... ..+..+.+.. .. ........+. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~---~~~~~~~~~~-~~-----~~~~~~~~~~-~~~~ 219 (294)
T PLN02824 158 NLLRETAVGKAFFKSVATPETVKNILCQ-CYH-------DDSAV---TDELVEAILR-PG-----LEPGAVDVFL-DFIS 219 (294)
T ss_pred HHHhchhHHHHHHHhhcCHHHHHHHHHH-hcc-------Chhhc---cHHHHHHHHh-cc-----CCchHHHHHH-HHhc
Confidence 000000000000 00 000000000000 000 00000 0001111100 00 0000000000 0100
Q ss_pred cCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 265 GFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 265 ~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
.. ........++++++|+++|+|++|..+|.+.++.+.+..+++++++++++||+++.| |+++++.|.+|+++
T Consensus 220 -~~----~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 220 -YS----GGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred -cc----cccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 00 000112236678888999999999999999999998888889999999999999998 99999999999975
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.5e-35 Score=244.09 Aligned_cols=277 Identities=18% Similarity=0.175 Sum_probs=170.2
Q ss_pred ccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-ccch
Q 018952 38 TAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-KRTR 116 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~ 116 (348)
+..++.. +|.+++|...|+ +++|||+||++++...|. .+++.|.++ |+|+++|+||||.|+.+. .++.
T Consensus 8 ~~~~~~~-~g~~i~y~~~G~-----g~~vvllHG~~~~~~~w~---~~~~~L~~~--~~via~D~~G~G~S~~~~~~~~~ 76 (295)
T PRK03592 8 EMRRVEV-LGSRMAYIETGE-----GDPIVFLHGNPTSSYLWR---NIIPHLAGL--GRCLAPDLIGMGASDKPDIDYTF 76 (295)
T ss_pred cceEEEE-CCEEEEEEEeCC-----CCEEEEECCCCCCHHHHH---HHHHHHhhC--CEEEEEcCCCCCCCCCCCCCCCH
Confidence 4445554 899999999885 579999999999999999 898988876 699999999999998654 4799
Q ss_pred hhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccccc-CCCCCccchhhhhhcccchhHHH
Q 018952 117 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYW-WPGFPANLTKEAYYLQLPQDQWA 195 (348)
Q Consensus 117 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
+++++|+..++++++. ++++++||||||.+|+.+|.++|++|+++|++++..... +...... ....+.. ..
T Consensus 77 ~~~a~dl~~ll~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~-~~~~~~~-~~----- 148 (295)
T PRK03592 77 ADHARYLDAWFDALGL-DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPA-VRELFQA-LR----- 148 (295)
T ss_pred HHHHHHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchh-HHHHHHH-Hh-----
Confidence 9999999999999999 899999999999999999999999999999999843210 0000000 0000000 00
Q ss_pred HHHhhhchhhh--hhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCC--cccc
Q 018952 196 LRVAHYAPWLA--YWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFG--TWEF 271 (348)
Q Consensus 196 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 271 (348)
......... ........+.... ...+...+ ...+.. ..... ..... ...+......... ....
T Consensus 149 --~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---~~~~~~-~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 215 (295)
T PRK03592 149 --SPGEGEEMVLEENVFIERVLPGSI-----LRPLSDEE---MAVYRR-PFPTP-ESRRP-TLSWPRELPIDGEPADVVA 215 (295)
T ss_pred --CcccccccccchhhHHhhcccCcc-----cccCCHHH---HHHHHh-hcCCc-hhhhh-hhhhhhhcCCCCcchhhHh
Confidence 000000000 0000000000000 00001000 000000 00000 00000 0000000000000 0000
Q ss_pred CCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHH-HHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcccccc
Q 018952 272 DPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRY-ISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEKVT 346 (348)
Q Consensus 272 ~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~~~ 346 (348)
........+.++++|+|+|+|++|.++++....+ +.+..+++++++++++||+++.| |+++++.|.+|+++....
T Consensus 216 ~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~~ 292 (295)
T PRK03592 216 LVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRLA 292 (295)
T ss_pred hhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhccc
Confidence 0001122356678889999999999995554544 45567889999999999999998 999999999999876543
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=4.7e-35 Score=238.68 Aligned_cols=262 Identities=19% Similarity=0.265 Sum_probs=170.7
Q ss_pred ceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-ccchhh
Q 018952 40 PRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-KRTRKS 118 (348)
Q Consensus 40 ~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~ 118 (348)
+++.+ +|.+++|...+.+ ..+++|||+||++++...|. ++++.|.+. |+|+++|+||||.|+.+. .+++++
T Consensus 5 ~~~~~-~~~~~~~~~~~~~--~~~~plvllHG~~~~~~~w~---~~~~~L~~~--~~vi~~Dl~G~G~S~~~~~~~~~~~ 76 (276)
T TIGR02240 5 RTIDL-DGQSIRTAVRPGK--EGLTPLLIFNGIGANLELVF---PFIEALDPD--LEVIAFDVPGVGGSSTPRHPYRFPG 76 (276)
T ss_pred EEecc-CCcEEEEEEecCC--CCCCcEEEEeCCCcchHHHH---HHHHHhccC--ceEEEECCCCCCCCCCCCCcCcHHH
Confidence 34444 8889999875322 23479999999999999999 898888764 999999999999998643 468999
Q ss_pred hHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHH
Q 018952 119 LALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRV 198 (348)
Q Consensus 119 ~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (348)
+++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++....... +.. ..............
T Consensus 77 ~~~~~~~~i~~l~~-~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~--~~~~~~~~~~~~~~--- 148 (276)
T TIGR02240 77 LAKLAARMLDYLDY-GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMV--PGK--PKVLMMMASPRRYI--- 148 (276)
T ss_pred HHHHHHHHHHHhCc-CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccC--CCc--hhHHHHhcCchhhh---
Confidence 99999999999998 89999999999999999999999999999999987532100 000 00000000000000
Q ss_pred hhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCC
Q 018952 199 AHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLEN 278 (348)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (348)
. ... .......++.. ... .+.+........ ... ........... ... .+ ....
T Consensus 149 ~---~~~-~~~~~~~~~~~---------~~~-~~~~~~~~~~~~-~~~--~~~~~~~~~~~----~~~-~~-----~~~~ 201 (276)
T TIGR02240 149 Q---PSH-GIHIAPDIYGG---------AFR-RDPELAMAHASK-VRS--GGKLGYYWQLF----AGL-GW-----TSIH 201 (276)
T ss_pred c---ccc-ccchhhhhccc---------eee-ccchhhhhhhhh-ccc--CCCchHHHHHH----HHc-CC-----chhh
Confidence 0 000 00000000000 000 000000000000 000 00000000000 000 00 1112
Q ss_pred CCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhccccc
Q 018952 279 PFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEKV 345 (348)
Q Consensus 279 p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~~ 345 (348)
.++++++|+++|+|++|.++|++..+++.+.+++++++++++ ||+++.| |+++++.|.+|+++...
T Consensus 202 ~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 202 WLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred HhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhh
Confidence 366788889999999999999999999999999999999985 9999998 99999999999987654
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=8.3e-35 Score=240.24 Aligned_cols=271 Identities=13% Similarity=0.068 Sum_probs=171.3
Q ss_pred CCCCcccceeecCCC-----eEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCC
Q 018952 33 GGPAITAPRIKLRDG-----RHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGE 107 (348)
Q Consensus 33 ~~~~~~~~~~~~~~g-----~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~ 107 (348)
.+.+....++.. +| .+++|...|+++ +++|||+||++++...|. .+++.|.++ ||+|+++|+||||.
T Consensus 15 ~~~~~~~~~~~~-~~~~~~~~~i~y~~~G~~~---~~~lvliHG~~~~~~~w~---~~~~~L~~~-gy~vi~~Dl~G~G~ 86 (302)
T PRK00870 15 PDYPFAPHYVDV-DDGDGGPLRMHYVDEGPAD---GPPVLLLHGEPSWSYLYR---KMIPILAAA-GHRVIAPDLIGFGR 86 (302)
T ss_pred cCCCCCceeEee-cCCCCceEEEEEEecCCCC---CCEEEEECCCCCchhhHH---HHHHHHHhC-CCEEEEECCCCCCC
Confidence 344556667776 45 789999988643 679999999999999999 999888765 89999999999999
Q ss_pred CCCCC---ccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhh
Q 018952 108 SDPDP---KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEA 184 (348)
Q Consensus 108 S~~~~---~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~ 184 (348)
|+.+. .++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++.......... .....
T Consensus 87 S~~~~~~~~~~~~~~a~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~ 163 (302)
T PRK00870 87 SDKPTRREDYTYARHVEWMRSWFEQLDL-TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMP--DAFWA 163 (302)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHcCC-CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccch--HHHhh
Confidence 98643 36899999999999999999 79999999999999999999999999999999975321100000 00000
Q ss_pred hhcccchhHHHHHHhhhchhh-hhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhh
Q 018952 185 YYLQLPQDQWALRVAHYAPWL-AYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMM 263 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (348)
+...... .+.. ........... ..... ....+.. ........ . ..... ....
T Consensus 164 ~~~~~~~----------~~~~~~~~~~~~~~~~----------~~~~~---~~~~~~~-~~~~~~~~-~-~~~~~-~~~~ 216 (302)
T PRK00870 164 WRAFSQY----------SPVLPVGRLVNGGTVR----------DLSDA---VRAAYDA-PFPDESYK-A-GARAF-PLLV 216 (302)
T ss_pred hhccccc----------CchhhHHHHhhccccc----------cCCHH---HHHHhhc-ccCChhhh-c-chhhh-hhcC
Confidence 0000000 0000 00000000000 00000 0000000 00000000 0 00000 0000
Q ss_pred h-cCCcccc-CCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCce---EEEeCCCCcceeeC-cchHHHHHH
Q 018952 264 I-GFGTWEF-DPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIR---YHEIPGSGHLIADA-DGMTEAIIK 337 (348)
Q Consensus 264 ~-~~~~~~~-~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~e-p~~~~~~i~ 337 (348)
. ....... ........+.++++|+++|+|++|.++|... +.+.+.+++++ +.+++++||+++.| |+++++.|.
T Consensus 217 ~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~ 295 (302)
T PRK00870 217 PTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVL 295 (302)
T ss_pred CCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHH
Confidence 0 0000000 0000012246677889999999999999876 88999998776 88999999999998 999999999
Q ss_pred HHhcc
Q 018952 338 ALLLG 342 (348)
Q Consensus 338 ~fl~~ 342 (348)
+|+++
T Consensus 296 ~fl~~ 300 (302)
T PRK00870 296 EFIRA 300 (302)
T ss_pred HHHhc
Confidence 99975
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.1e-34 Score=242.04 Aligned_cols=273 Identities=18% Similarity=0.206 Sum_probs=173.1
Q ss_pred CCcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchh-hhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc
Q 018952 35 PAITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHD-AAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK 113 (348)
Q Consensus 35 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~-~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~ 113 (348)
...++.++..++|.+++|..+++++..++++|||+||++++... |. .+...|.+. ||+|+++|+||||.|+.+..
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~---~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~ 134 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFE---GIARKIASS-GYGVFAMDYPGFGLSEGLHG 134 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHH---HHHHHHHhC-CCEEEEecCCCCCCCCCCCC
Confidence 44556667778999999999987654567899999999988654 57 677777765 89999999999999986544
Q ss_pred --cchhhhHHHHHHHHHHhCC-----CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhh
Q 018952 114 --RTRKSLALDIEELADQLGL-----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYY 186 (348)
Q Consensus 114 --~~~~~~~~di~~~l~~l~~-----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 186 (348)
.+++++++|+.++++.++. +.+++|+||||||.+++.++.++|++++++|+++|.........+.....
T Consensus 135 ~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~---- 210 (349)
T PLN02385 135 YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVL---- 210 (349)
T ss_pred CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHH----
Confidence 3889999999999988754 13799999999999999999999999999999998653211100100000
Q ss_pred cccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcC
Q 018952 187 LQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGF 266 (348)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (348)
..........+. ...++..... ...+................ ............+ ...
T Consensus 211 ------~~~~~~~~~~p~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l-~~~---- 268 (349)
T PLN02385 211 ------QILILLANLLPK-------AKLVPQKDLA---ELAFRDLKKRKMAEYNVIAY-KDKPRLRTAVELL-RTT---- 268 (349)
T ss_pred ------HHHHHHHHHCCC-------ceecCCCccc---cccccCHHHHHHhhcCccee-CCCcchHHHHHHH-HHH----
Confidence 000000000000 0000000000 00000000000000000000 0000000000000 000
Q ss_pred CccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC--CCceEEEeCCCCcceeeC-cch----HHHHHHHH
Q 018952 267 GTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL--PWIRYHEIPGSGHLIADA-DGM----TEAIIKAL 339 (348)
Q Consensus 267 ~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-p~~----~~~~i~~f 339 (348)
.++...+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||+++.| |++ +.+.|.+|
T Consensus 269 -------~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~w 341 (349)
T PLN02385 269 -------QEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISW 341 (349)
T ss_pred -------HHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHH
Confidence 0122335567778999999999999999999999987 568999999999999986 876 77888899
Q ss_pred hcccc
Q 018952 340 LLGEK 344 (348)
Q Consensus 340 l~~~~ 344 (348)
|++..
T Consensus 342 L~~~~ 346 (349)
T PLN02385 342 LDSHS 346 (349)
T ss_pred HHHhc
Confidence 87643
No 7
>PLN02578 hydrolase
Probab=100.00 E-value=8.2e-34 Score=238.32 Aligned_cols=275 Identities=17% Similarity=0.169 Sum_probs=168.0
Q ss_pred CCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-ccchhhhHHHH
Q 018952 45 RDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDI 123 (348)
Q Consensus 45 ~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di 123 (348)
.+|.+++|...|+ +++|||+||++++...|. .+++.|.++ |+|+++|+||||.|+.+. .++.+++++|+
T Consensus 73 ~~~~~i~Y~~~g~-----g~~vvliHG~~~~~~~w~---~~~~~l~~~--~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l 142 (354)
T PLN02578 73 WRGHKIHYVVQGE-----GLPIVLIHGFGASAFHWR---YNIPELAKK--YKVYALDLLGFGWSDKALIEYDAMVWRDQV 142 (354)
T ss_pred ECCEEEEEEEcCC-----CCeEEEECCCCCCHHHHH---HHHHHHhcC--CEEEEECCCCCCCCCCcccccCHHHHHHHH
Confidence 3688999998874 578999999999999999 888888764 999999999999998754 47889999999
Q ss_pred HHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccch---hhhhhcccchhHHHHHHhh
Q 018952 124 EELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLT---KEAYYLQLPQDQWALRVAH 200 (348)
Q Consensus 124 ~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 200 (348)
.++++.+.. ++++++|||+||.+++.+|.++|++|+++|++++...+.......... ...................
T Consensus 143 ~~~i~~~~~-~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (354)
T PLN02578 143 ADFVKEVVK-EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQR 221 (354)
T ss_pred HHHHHHhcc-CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHH
Confidence 999999988 899999999999999999999999999999999764322111000000 0000000000000000000
Q ss_pred hchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhh--hhhhHHHHHHhhhcCCccccCCCCcCC
Q 018952 201 YAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQ--QGVHESLFRDMMIGFGTWEFDPMDLEN 278 (348)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (348)
...... .... .............+. +................... ...+........... .......
T Consensus 222 ~~~~~~---~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 290 (354)
T PLN02578 222 VVLGFL---FWQA-KQPSRIESVLKSVYK--DKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQ-----SRYTLDS 290 (354)
T ss_pred HHHHHH---HHHh-cCHHHHHHHHHHhcC--CcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCC-----CCCCHHH
Confidence 000000 0000 000000000000000 00000000000000000000 000000000000000 0012223
Q ss_pred CCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 279 PFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 279 p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
.++++++|+++|+|++|.++|.+.++++.+.+|+.+++++ ++||+++.| |+++++.|.+|++.
T Consensus 291 ~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~~ 354 (354)
T PLN02578 291 LLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLSS 354 (354)
T ss_pred HhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHhC
Confidence 4667888899999999999999999999999999999999 589999998 99999999999863
No 8
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.6e-34 Score=241.43 Aligned_cols=270 Identities=16% Similarity=0.156 Sum_probs=167.9
Q ss_pred eeecCCCe-EEEEeeccCCc-cCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC--ccch
Q 018952 41 RIKLRDGR-HLAYKEHGVSK-ELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP--KRTR 116 (348)
Q Consensus 41 ~~~~~~g~-~l~y~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~ 116 (348)
++.. +|. +++|...|+++ ...+|+|||+||++++...|. ++++.|.+ +|+|+++|+||||.|+.+. .++.
T Consensus 65 ~~~~-~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~---~~~~~L~~--~~~via~Dl~G~G~S~~~~~~~~~~ 138 (360)
T PLN02679 65 KWKW-KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWR---RNIGVLAK--NYTVYAIDLLGFGASDKPPGFSYTM 138 (360)
T ss_pred eEEE-CCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHH---HHHHHHhc--CCEEEEECCCCCCCCCCCCCccccH
Confidence 3444 455 99999998741 113589999999999999999 89888865 5999999999999998753 4689
Q ss_pred hhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHH-HhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHH
Q 018952 117 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLK-YISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWA 195 (348)
Q Consensus 117 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~-~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
+++++++.+++++++. ++++++||||||.+++.++. .+|++|+++|++++............ ... .......+.
T Consensus 139 ~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~---~~~-~~~~~~~~~ 213 (360)
T PLN02679 139 ETWAELILDFLEEVVQ-KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDD---WRI-KLLLPLLWL 213 (360)
T ss_pred HHHHHHHHHHHHHhcC-CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccch---HHH-hhhcchHHH
Confidence 9999999999999999 89999999999999999887 47999999999998642110000000 000 000000000
Q ss_pred HHH----hhhc---------hhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHh
Q 018952 196 LRV----AHYA---------PWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDM 262 (348)
Q Consensus 196 ~~~----~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (348)
... .... ......... ..+. .+.... .+....+ .... ........+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~---~~~~~~~-~~~~-----~~~~~~~~~~~~~ 276 (360)
T PLN02679 214 IDFLLKQRGIASALFNRVKQRDNLKNILL-SVYG-------NKEAVD---DELVEII-RGPA-----DDEGALDAFVSIV 276 (360)
T ss_pred HHHHhhchhhHHHHHHHhcCHHHHHHHHH-Hhcc-------CcccCC---HHHHHHH-Hhhc-----cCCChHHHHHHHH
Confidence 000 0000 000000000 0000 000000 0011110 0000 0000011111100
Q ss_pred hhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHH-----HHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHH
Q 018952 263 MIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVIL-----QRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAII 336 (348)
Q Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i 336 (348)
..... .+....++++++|+|+|+|++|.++|++. .+.+.+.+|++++++++++||+++.| |+++++.|
T Consensus 277 -~~~~~-----~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I 350 (360)
T PLN02679 277 -TGPPG-----PNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKL 350 (360)
T ss_pred -hcCCC-----CCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHH
Confidence 00000 01112356678889999999999998863 34566778999999999999999998 99999999
Q ss_pred HHHhcccc
Q 018952 337 KALLLGEK 344 (348)
Q Consensus 337 ~~fl~~~~ 344 (348)
.+||++..
T Consensus 351 ~~FL~~~~ 358 (360)
T PLN02679 351 LPWLAQLP 358 (360)
T ss_pred HHHHHhcC
Confidence 99998653
No 9
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=2e-33 Score=236.76 Aligned_cols=280 Identities=16% Similarity=0.158 Sum_probs=161.2
Q ss_pred CCCeEEEEeeccCCcc----CCCceEEEEcCCCCCchhhhhhhcccHHHH------hhcCcEEEEEcCCCCCCCCCCC--
Q 018952 45 RDGRHLAYKEHGVSKE----LAKYKIIFVHGFGSSRHDAAIAANLSPEVV------DELGIYIVSFDRPGYGESDPDP-- 112 (348)
Q Consensus 45 ~~g~~l~y~~~g~~~~----~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~------~~~g~~vi~~D~~G~G~S~~~~-- 112 (348)
.+|.+++|...|+++. +.+|+|||+||++++...|.. ..+.+.+. ...+|+||++|+||||.|+.+.
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~-~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLS-PTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhcc-chhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 4789999999986421 116899999999999877740 02223331 0126999999999999998643
Q ss_pred ------ccchhhhHHHHHHH-HHHhCCCCeEE-EEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhh
Q 018952 113 ------KRTRKSLALDIEEL-ADQLGLGSKFY-VVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEA 184 (348)
Q Consensus 113 ------~~~~~~~~~di~~~-l~~l~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~ 184 (348)
.++++++++++..+ ++++++ ++++ ++||||||++|+.+|.++|++|+++|++++.... ..... ..
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi-~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~----~~~~~--~~ 198 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGV-KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTE----MSGRN--WM 198 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCC-CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCccc----ccHHH--HH
Confidence 36889999998885 488999 7875 8999999999999999999999999999875310 00000 00
Q ss_pred hhcccchhHHHHHHh----hh--ch-hhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHH
Q 018952 185 YYLQLPQDQWALRVA----HY--AP-WLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHES 257 (348)
Q Consensus 185 ~~~~~~~~~~~~~~~----~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (348)
...... ........ .. .+ .....+....++........... ................. .. ......
T Consensus 199 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~-~~~~~~ 271 (360)
T PRK06489 199 WRRMLI-ESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQ---APTRAAADKLVDERLAA--PV-TADAND 271 (360)
T ss_pred HHHHHH-HHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHh---cCChHHHHHHHHHHHHh--hh-hcCHHH
Confidence 000000 00000000 00 00 00000000000000000000000 00000000000000000 00 000001
Q ss_pred HHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHH--HHHHhhCCCceEEEeCCC----CcceeeCcch
Q 018952 258 LFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQ--RYISKKLPWIRYHEIPGS----GHLIADADGM 331 (348)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~----gH~~~~ep~~ 331 (348)
+...... . ...+....+.+|++|+|+|+|++|.++|++.+ +.+++.+|+++++++|++ ||.++.+|++
T Consensus 272 ~~~~~~~-~-----~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~e~P~~ 345 (360)
T PRK06489 272 FLYQWDS-S-----RDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTTGSAKF 345 (360)
T ss_pred HHHHHHH-h-----hccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccccCHHH
Confidence 1000000 0 00122334667888899999999999999876 789999999999999996 9999833999
Q ss_pred HHHHHHHHhccccc
Q 018952 332 TEAIIKALLLGEKV 345 (348)
Q Consensus 332 ~~~~i~~fl~~~~~ 345 (348)
+++.|.+||++..+
T Consensus 346 ~~~~i~~FL~~~~~ 359 (360)
T PRK06489 346 WKAYLAEFLAQVPK 359 (360)
T ss_pred HHHHHHHHHHhccc
Confidence 99999999987644
No 10
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=8.3e-34 Score=228.47 Aligned_cols=248 Identities=13% Similarity=0.027 Sum_probs=158.0
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC--ccchhhhHHHHHHHHHHhCCCCeEEEEEe
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLALDIEELADQLGLGSKFYVVGF 141 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~di~~~l~~l~~~~~~~lvG~ 141 (348)
-+|||+||++.+...|. .+++.|.+. ||+|+++|+||||.|+.+. .++.+++++|+.++++.++..++++++||
T Consensus 4 ~~vvllHG~~~~~~~w~---~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGh 79 (255)
T PLN02965 4 IHFVFVHGASHGAWCWY---KLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGH 79 (255)
T ss_pred eEEEEECCCCCCcCcHH---HHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEec
Confidence 35999999999999999 898988654 7999999999999997543 46899999999999999986349999999
Q ss_pred ccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCccc
Q 018952 142 SMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVV 221 (348)
Q Consensus 142 S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (348)
||||.+++.+|.++|++|+++|++++..... .......+.. + ... ..... ...+......
T Consensus 80 SmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~-----~~~~~~~~~~------~---~~~-~~~~~-----~~~~~~~~~~ 139 (255)
T PLN02965 80 SIGGGSVTEALCKFTDKISMAIYVAAAMVKP-----GSIISPRLKN------V---MEG-TEKIW-----DYTFGEGPDK 139 (255)
T ss_pred CcchHHHHHHHHhCchheeEEEEEccccCCC-----CCCccHHHHh------h---hhc-cccce-----eeeeccCCCC
Confidence 9999999999999999999999999853210 0000000000 0 000 00000 0000000000
Q ss_pred ccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChH
Q 018952 222 ARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVI 301 (348)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~ 301 (348)
........ .+........... .......................++...++.+++|+++|+|++|..+|++
T Consensus 140 ~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~ 210 (255)
T PLN02965 140 PPTGIMMK---PEFVRHYYYNQSP------LEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPV 210 (255)
T ss_pred CcchhhcC---HHHHHHHHhcCCC------HHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHH
Confidence 00000000 0000000000000 00000000000000000000011222345568888999999999999999
Q ss_pred HHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcccc
Q 018952 302 LQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEK 344 (348)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~ 344 (348)
..+.+++.++++++++++++||+++.| |+++++.|.+|+++.+
T Consensus 211 ~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 211 RQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred HHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998 9999999999998754
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=9.9e-34 Score=228.89 Aligned_cols=250 Identities=17% Similarity=0.165 Sum_probs=165.8
Q ss_pred EEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHH
Q 018952 49 HLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELAD 128 (348)
Q Consensus 49 ~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~ 128 (348)
++.|+..++..+.++|+|||+||++++...|. .+...|.+ +|+|+++|+||||.|..+..++++++++|+.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLG---VLARDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLD 76 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHH---HHHHHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 45677765544456899999999999999999 88888876 49999999999999998777899999999999999
Q ss_pred HhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHh-hhchh-hh
Q 018952 129 QLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVA-HYAPW-LA 206 (348)
Q Consensus 129 ~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~ 206 (348)
+++. ++++++||||||.+++.+|.++|++|+++|++++...... .......+. .+..... ..... ..
T Consensus 77 ~l~~-~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~----~~~~~~~~~------~~~~~~~~~~~~~~~~ 145 (255)
T PRK10673 77 ALQI-EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH----VRRHDEIFA------AINAVSEAGATTRQQA 145 (255)
T ss_pred HcCC-CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc----chhhHHHHH------HHHHhhhcccccHHHH
Confidence 9998 7899999999999999999999999999999986432100 000000000 0000000 00000 00
Q ss_pred hhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCc
Q 018952 207 YWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGS 286 (348)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~P 286 (348)
.... ..... .+....+...... .... ............. . .....++++++|
T Consensus 146 ~~~~-~~~~~----------------~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~-~--------~~~~~~~~~~~P 197 (255)
T PRK10673 146 AAIM-RQHLN----------------EEGVIQFLLKSFV-DGEW-RFNVPVLWDQYPH-I--------VGWEKIPAWPHP 197 (255)
T ss_pred HHHH-HHhcC----------------CHHHHHHHHhcCC-ccee-EeeHHHHHHhHHH-H--------hCCcccCCCCCC
Confidence 0000 00000 0000000000000 0000 0000000000000 0 011235667888
Q ss_pred EEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 287 VHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 287 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
+|+|+|++|..++.+..+.+.+.++++++.+++++||+++.| |+++++.|.+||++
T Consensus 198 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 198 ALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred eEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999998 99999999999975
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.4e-33 Score=227.93 Aligned_cols=267 Identities=16% Similarity=0.174 Sum_probs=165.5
Q ss_pred CcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC--c
Q 018952 36 AITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP--K 113 (348)
Q Consensus 36 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~ 113 (348)
+++..++.+ +|.+++|...|+ +++|||+||++.+...|. .+.+.|.+ +|+|+++|+||||.|+.+. .
T Consensus 13 ~~~~~~~~~-~~~~i~y~~~G~-----~~~iv~lHG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~ 81 (286)
T PRK03204 13 PFESRWFDS-SRGRIHYIDEGT-----GPPILLCHGNPTWSFLYR---DIIVALRD--RFRCVAPDYLGFGLSERPSGFG 81 (286)
T ss_pred cccceEEEc-CCcEEEEEECCC-----CCEEEEECCCCccHHHHH---HHHHHHhC--CcEEEEECCCCCCCCCCCCccc
Confidence 455666666 788899999874 579999999999999999 88888765 4999999999999998654 3
Q ss_pred cchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhH
Q 018952 114 RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQ 193 (348)
Q Consensus 114 ~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (348)
++.+++++++.+++++++. ++++++||||||.+++.++..+|++|+++|++++... + +.......+........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~---~--~~~~~~~~~~~~~~~~~ 155 (286)
T PRK03204 82 YQIDEHARVIGEFVDHLGL-DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFW---P--ADTLAMKAFSRVMSSPP 155 (286)
T ss_pred cCHHHHHHHHHHHHHHhCC-CCEEEEEECccHHHHHHHHHhChhheeEEEEECcccc---C--CCchhHHHHHHHhcccc
Confidence 6889999999999999999 8999999999999999999999999999999886431 0 00000000000000000
Q ss_pred HHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhh-hhhhhhHHHHHHhhhcCCccccC
Q 018952 194 WALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQV-IQQGVHESLFRDMMIGFGTWEFD 272 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 272 (348)
..... . ........++.... ...........+............. .......... ....
T Consensus 156 ~~~~~---~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------- 215 (286)
T PRK03204 156 VQYAI---L---RRNFFVERLIPAGT-----EHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAAR-PLLA-------- 215 (286)
T ss_pred chhhh---h---hhhHHHHHhccccc-----cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhh-HHHH--------
Confidence 00000 0 00000011110000 0000000000000000000000000 0000000000 0000
Q ss_pred CCCcCCCCCC--CCCcEEEEEeCCCCCCChH-HHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhc
Q 018952 273 PMDLENPFPN--SEGSVHLWQGDEDRLVPVI-LQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 341 (348)
Q Consensus 273 ~~~~~~p~~~--~~~Pvl~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 341 (348)
++...+.+ +++|+++|+|++|.++++. ..+.+.+.+|++++++++++||+++.| |+++++.|.+||.
T Consensus 216 --~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 216 --RLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred --HhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 01000111 2677999999999988654 578899999999999999999999998 9999999999973
No 13
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.3e-33 Score=228.02 Aligned_cols=251 Identities=15% Similarity=0.126 Sum_probs=156.3
Q ss_pred EEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHH
Q 018952 49 HLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELAD 128 (348)
Q Consensus 49 ~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~ 128 (348)
.++|..+|.+ .|+|||+||+++++..|. .+.+.|.++ |+|+++|+||||.|+....++.+++++++.
T Consensus 3 ~~~y~~~G~g----~~~ivllHG~~~~~~~w~---~~~~~L~~~--~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~---- 69 (256)
T PRK10349 3 NIWWQTKGQG----NVHLVLLHGWGLNAEVWR---CIDEELSSH--FTLHLVDLPGFGRSRGFGALSLADMAEAVL---- 69 (256)
T ss_pred ccchhhcCCC----CCeEEEECCCCCChhHHH---HHHHHHhcC--CEEEEecCCCCCCCCCCCCCCHHHHHHHHH----
Confidence 3678777752 257999999999999999 998988765 999999999999998665567777776655
Q ss_pred HhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhh
Q 018952 129 QLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYW 208 (348)
Q Consensus 129 ~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (348)
+++. ++++++||||||.+++.+|.++|++|+++|++++................... .+..............
T Consensus 70 ~~~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 142 (256)
T PRK10349 70 QQAP-DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLA------GFQQQLSDDFQRTVER 142 (256)
T ss_pred hcCC-CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHH------HHHHHHHhchHHHHHH
Confidence 3566 79999999999999999999999999999999975332100000000000000 0000000000000000
Q ss_pred hhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEE
Q 018952 209 WNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVH 288 (348)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl 288 (348)
+.....+. ................... ........... ... ...++...++++++|++
T Consensus 143 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~~-----~~~~~~~~l~~i~~P~l 200 (256)
T PRK10349 143 FLALQTMG--------TETARQDARALKKTVLALP--------MPEVDVLNGGL-EIL-----KTVDLRQPLQNVSMPFL 200 (256)
T ss_pred HHHHHHcc--------CchHHHHHHHHHHHhhccC--------CCcHHHHHHHH-HHH-----HhCccHHHHhhcCCCeE
Confidence 00000000 0000000000000000000 00000000000 000 00123345677888899
Q ss_pred EEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhc
Q 018952 289 LWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 341 (348)
Q Consensus 289 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 341 (348)
+|+|++|.++|.+..+.+.+.++++++++++++||+++.| |+.|++.+.+|-.
T Consensus 201 ii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 201 RLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred EEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999998 9999999999854
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=6.4e-33 Score=227.28 Aligned_cols=264 Identities=19% Similarity=0.224 Sum_probs=170.6
Q ss_pred ecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC--ccchhhhH
Q 018952 43 KLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLA 120 (348)
Q Consensus 43 ~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~ 120 (348)
...+|.+++|...|+.+ +++|||+||++++...|. .+.+.|.+ +|+|+++|+||||.|+.+. .+++++++
T Consensus 11 ~~~~~~~~~~~~~g~~~---~~~vv~~hG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (278)
T TIGR03056 11 VTVGPFHWHVQDMGPTA---GPLLLLLHGTGASTHSWR---DLMPPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLPSMA 82 (278)
T ss_pred eeECCEEEEEEecCCCC---CCeEEEEcCCCCCHHHHH---HHHHHHhh--CcEEEeecCCCCCCCCCccccCCCHHHHH
Confidence 34499999999987643 689999999999999999 88888876 4999999999999998654 46999999
Q ss_pred HHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhh
Q 018952 121 LDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAH 200 (348)
Q Consensus 121 ~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (348)
+|+.+++++++. ++++++||||||.+++.+|.++|++++++|++++....... ..... ...... ... ...
T Consensus 83 ~~l~~~i~~~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~-~~~~~-~~~~~~------~~~-~~~ 152 (278)
T TIGR03056 83 EDLSALCAAEGL-SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEG-MAGTL-FPYMAR------VLA-CNP 152 (278)
T ss_pred HHHHHHHHHcCC-CCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccc-ccccc-cchhhH------hhh-hcc
Confidence 999999999998 79999999999999999999999999999999875431100 00000 000000 000 000
Q ss_pred hchhhhhhhh-hccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCC
Q 018952 201 YAPWLAYWWN-TQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENP 279 (348)
Q Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 279 (348)
.......... ...... .................+..... ......... .....|. .......
T Consensus 153 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~~~~~--~~~~~~~ 215 (278)
T TIGR03056 153 FTPPMMSRGAADQQRVE--RLIRDTGSLLDKAGMTYYGRLIR---------SPAHVDGAL----SMMAQWD--LAPLNRD 215 (278)
T ss_pred cchHHHHhhcccCcchh--HHhhccccccccchhhHHHHhhc---------CchhhhHHH----HHhhccc--ccchhhh
Confidence 0000000000 000000 00000000000000000000000 000000000 0011111 1122334
Q ss_pred CCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhc
Q 018952 280 FPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 341 (348)
Q Consensus 280 ~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 341 (348)
++++++|+++|+|++|..+|++..+.+.+.+++++++.++++||+++.| |+++++.|.+|++
T Consensus 216 ~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 216 LPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 6778889999999999999999999999999999999999999999998 9999999999985
No 15
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=1.1e-32 Score=226.11 Aligned_cols=257 Identities=18% Similarity=0.154 Sum_probs=159.5
Q ss_pred CeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcc---cHHHHhhcCcEEEEEcCCCCCCCCCCCc--cchhhhHH
Q 018952 47 GRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANL---SPEVVDELGIYIVSFDRPGYGESDPDPK--RTRKSLAL 121 (348)
Q Consensus 47 g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~---~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~ 121 (348)
|.+++|...|. +++|||+||++++...|. .+ +..+.++ ||+|+++|+||||.|+.+.. .....+++
T Consensus 19 ~~~~~y~~~g~-----~~~ivllHG~~~~~~~~~---~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 89 (282)
T TIGR03343 19 NFRIHYNEAGN-----GEAVIMLHGGGPGAGGWS---NYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNAR 89 (282)
T ss_pred ceeEEEEecCC-----CCeEEEECCCCCchhhHH---HHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHH
Confidence 56788988764 478999999999888886 43 3445544 79999999999999986532 12225789
Q ss_pred HHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCcc-chhhhhhcccchhHHHHHHhh
Q 018952 122 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPAN-LTKEAYYLQLPQDQWALRVAH 200 (348)
Q Consensus 122 di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (348)
|+.+++++++. ++++++||||||.+++.+|.++|++++++|++++.........+.. .....+.... ..
T Consensus 90 ~l~~~l~~l~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 159 (282)
T TIGR03343 90 AVKGLMDALDI-EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLY---------AE 159 (282)
T ss_pred HHHHHHHHcCC-CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHh---------cC
Confidence 99999999999 8999999999999999999999999999999997532100000000 0000000000 00
Q ss_pred hchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCC
Q 018952 201 YAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPF 280 (348)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 280 (348)
..............+. ...... +..+......... ......+.. ..........+....+
T Consensus 160 ~~~~~~~~~~~~~~~~--------~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~l 219 (282)
T TIGR03343 160 PSYETLKQMLNVFLFD--------QSLITE---ELLQGRWENIQRQ-----PEHLKNFLI----SSQKAPLSTWDVTARL 219 (282)
T ss_pred CCHHHHHHHHhhCccC--------cccCcH---HHHHhHHHHhhcC-----HHHHHHHHH----hccccccccchHHHHH
Confidence 0000000000000000 000000 0000000000000 000000000 0000000011223346
Q ss_pred CCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 281 PNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 281 ~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
+++++|+++++|++|.++|++.++++++.+|++++++++++||+++.| |+.+++.|.+|++.
T Consensus 220 ~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 220 GEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred hhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 678888999999999999999999999999999999999999999998 99999999999863
No 16
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=4.4e-32 Score=230.52 Aligned_cols=281 Identities=18% Similarity=0.265 Sum_probs=167.1
Q ss_pred ecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcc-cHHHHh--hcCcEEEEEcCCCCCCCCCCC--ccchh
Q 018952 43 KLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANL-SPEVVD--ELGIYIVSFDRPGYGESDPDP--KRTRK 117 (348)
Q Consensus 43 ~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~-~~~l~~--~~g~~vi~~D~~G~G~S~~~~--~~~~~ 117 (348)
...+|.+++|...|+++.+.+++|||+||++++...|. .. ++.+.+ +.+|+|+++|+||||.|+.+. .++++
T Consensus 181 ~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~---~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~ 257 (481)
T PLN03087 181 LSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWT---ETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLR 257 (481)
T ss_pred EeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHH---HHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHH
Confidence 33467899999998876455789999999999999997 53 355542 237999999999999998653 36899
Q ss_pred hhHHHHH-HHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhh-hh-hcccchhHH
Q 018952 118 SLALDIE-ELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKE-AY-YLQLPQDQW 194 (348)
Q Consensus 118 ~~~~di~-~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 194 (348)
++++++. .++++++. ++++++||||||.+++.+|.++|++|+++|++++..... +...... .. ........+
T Consensus 258 ~~a~~l~~~ll~~lg~-~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 332 (481)
T PLN03087 258 EHLEMIERSVLERYKV-KSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPV----PKGVQATQYVMRKVAPRRVW 332 (481)
T ss_pred HHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcccc----ccchhHHHHHHHHhcccccC
Confidence 9999994 89999999 899999999999999999999999999999999753211 1100000 00 000000000
Q ss_pred HHHHhhhchhhhhhhhh-ccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhh-------hhhhhHHHHHHhhhcC
Q 018952 195 ALRVAHYAPWLAYWWNT-QKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVI-------QQGVHESLFRDMMIGF 266 (348)
Q Consensus 195 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 266 (348)
.. .........++.. ...... ....... ..+................ .......+. ......
T Consensus 333 ~~--~~~~~~~~~w~~~~~~~~~~--~~~~~~~-----~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~i~~~ 402 (481)
T PLN03087 333 PP--IAFGASVACWYEHISRTICL--VICKNHR-----LWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLH-NIICGS 402 (481)
T ss_pred Cc--cccchhHHHHHHHHHhhhhc--ccccchH-----HHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHH-HHHhch
Confidence 00 0000000000000 000000 0000000 0000000000000000000 000000000 000000
Q ss_pred CccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceee-C-cchHHHHHHHHhccc
Q 018952 267 GTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIAD-A-DGMTEAIIKALLLGE 343 (348)
Q Consensus 267 ~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl~~~ 343 (348)
.. ..+ ..+..-..++++|+|+|+|++|.++|++..+.+++.+|++++++++++||+++. | |+.+++.|.+|.+..
T Consensus 403 ~~-~l~-~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 403 GS-KLD-GYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred hh-hhh-hHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 00 000 001111224667799999999999999999999999999999999999999885 7 999999999998653
No 17
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=2.1e-32 Score=228.39 Aligned_cols=276 Identities=16% Similarity=0.154 Sum_probs=172.4
Q ss_pred CCcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC--
Q 018952 35 PAITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-- 112 (348)
Q Consensus 35 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-- 112 (348)
..+........+|.+++|...|+++ +++|||+||++++...|. .+++.|.+ +|+|+++|+||||.|+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~y~~~G~~~---~~~ivllHG~~~~~~~w~---~~~~~L~~--~~~Via~DlpG~G~S~~p~~~ 173 (383)
T PLN03084 102 LKMGAQSQASSDLFRWFCVESGSNN---NPPVLLIHGFPSQAYSYR---KVLPVLSK--NYHAIAFDWLGFGFSDKPQPG 173 (383)
T ss_pred ccccceeEEcCCceEEEEEecCCCC---CCeEEEECCCCCCHHHHH---HHHHHHhc--CCEEEEECCCCCCCCCCCccc
Confidence 3444455556799999999998643 689999999999999999 89888875 5999999999999998654
Q ss_pred ---ccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhccc
Q 018952 113 ---KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQL 189 (348)
Q Consensus 113 ---~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (348)
.++++++++++.+++++++. ++++++|||+||.+++.+|.++|++|+++|++++.........+.. ...+....
T Consensus 174 ~~~~ys~~~~a~~l~~~i~~l~~-~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~--l~~~~~~l 250 (383)
T PLN03084 174 YGFNYTLDEYVSSLESLIDELKS-DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPST--LSEFSNFL 250 (383)
T ss_pred ccccCCHHHHHHHHHHHHHHhCC-CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHH--HHHHHHHH
Confidence 36999999999999999999 8999999999999999999999999999999998642110000100 00000000
Q ss_pred chhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCcc
Q 018952 190 PQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTW 269 (348)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (348)
...... ..+ .. .....+. ..........+...+.. ....... .......+.+........+
T Consensus 251 ----~~~~~~-~~~--~~--~~~~~~~-----~~~~~~~~~e~~~~~~~----~~~~~~~-~~~~l~~~~r~~~~~l~~~ 311 (383)
T PLN03084 251 ----LGEIFS-QDP--LR--ASDKALT-----SCGPYAMKEDDAMVYRR----PYLTSGS-SGFALNAISRSMKKELKKY 311 (383)
T ss_pred ----hhhhhh-cch--HH--HHhhhhc-----ccCccCCCHHHHHHHhc----cccCCcc-hHHHHHHHHHHhhcccchh
Confidence 000000 000 00 0000000 00000000001000000 0000000 0000000001100000000
Q ss_pred ccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 270 EFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 270 ~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
........ ...++++|+++|+|+.|.+++.+..+++++. ++.++++++++||+++.| |+++++.|.+|++.
T Consensus 312 ~~~l~~~l-~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 312 IEEMRSIL-TDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred hHHHHhhh-ccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 00000000 0134677899999999999999999988887 488999999999999999 99999999999863
No 18
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=3.9e-32 Score=226.18 Aligned_cols=276 Identities=14% Similarity=0.099 Sum_probs=167.4
Q ss_pred ccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-----
Q 018952 38 TAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP----- 112 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~----- 112 (348)
++.++...||.+++|..++++ .++++||++||++++...|. .++..+.+. ||+|+++|+||||.|+.+.
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y~---~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~ 104 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYVKYA---ELAYDLFHL-GYDVLIIDHRGQGRSGRLLDDPHR 104 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHHHHH---HHHHHHHHC-CCeEEEEcCCCCCCCCCCCCCCCc
Confidence 455666679999999999764 34679999999999988888 787777765 8999999999999997532
Q ss_pred --ccchhhhHHHHHHHHHHh----CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhh
Q 018952 113 --KRTRKSLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYY 186 (348)
Q Consensus 113 --~~~~~~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 186 (348)
..+++++++|+..+++++ +. .+++++||||||.+++.++.++|++++++|+++|........ +... ...+.
T Consensus 105 ~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~~-~~~~~ 181 (330)
T PRK10749 105 GHVERFNDYVDDLAAFWQQEIQPGPY-RKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSWM-ARRIL 181 (330)
T ss_pred CccccHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcHH-HHHHH
Confidence 147899999999999887 55 799999999999999999999999999999999864311000 0000 00000
Q ss_pred cccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhh-hhhhHHHHHHhhhc
Q 018952 187 LQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQ-QGVHESLFRDMMIG 265 (348)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 265 (348)
.+........... ......+.... ....... ...+................. .............
T Consensus 182 ------~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 247 (330)
T PRK10749 182 ------NWAEGHPRIRDGY--AIGTGRWRPLP----FAINVLT-HSRERYRRNLRFYADDPELRVGGPTYHWVRESILA- 247 (330)
T ss_pred ------HHHHHhcCCCCcC--CCCCCCCCCCC----cCCCCCC-CCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHH-
Confidence 0000000000000 00000000000 0000000 001111111100000000000 0000000000000
Q ss_pred CCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC-------CCceEEEeCCCCcceeeC-c---chHHH
Q 018952 266 FGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL-------PWIRYHEIPGSGHLIADA-D---GMTEA 334 (348)
Q Consensus 266 ~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~e-p---~~~~~ 334 (348)
.. .+...++++++|+|+|+|++|.+++++.++.+++.+ ++++++++||+||.++.| + +.+.+
T Consensus 248 ~~-------~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~ 320 (330)
T PRK10749 248 GE-------QVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALN 320 (330)
T ss_pred HH-------HHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHH
Confidence 00 111234566777999999999999999999888866 346899999999999987 4 55777
Q ss_pred HHHHHhccc
Q 018952 335 IIKALLLGE 343 (348)
Q Consensus 335 ~i~~fl~~~ 343 (348)
.|.+||++.
T Consensus 321 ~i~~fl~~~ 329 (330)
T PRK10749 321 AIVDFFNRH 329 (330)
T ss_pred HHHHHHhhc
Confidence 788888764
No 19
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.7e-32 Score=227.23 Aligned_cols=274 Identities=17% Similarity=0.127 Sum_probs=166.9
Q ss_pred CCCCCcccceeecCCCeEEEEeeccCCcc-CCCceEEEEcCCCCCch-hhhhhhcccHHHHhhcCcEEEEEcCCCCCCCC
Q 018952 32 PGGPAITAPRIKLRDGRHLAYKEHGVSKE-LAKYKIIFVHGFGSSRH-DAAIAANLSPEVVDELGIYIVSFDRPGYGESD 109 (348)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~l~y~~~g~~~~-~~~~~vl~~hG~~~~~~-~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~ 109 (348)
+.+...+..++...||.+++|+.++++.. ..+++|||+||++.+.. .|. .+...|.++ ||+|+++|+||||.|+
T Consensus 27 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~---~~~~~L~~~-Gy~V~~~D~rGhG~S~ 102 (330)
T PLN02298 27 LKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQ---STAIFLAQM-GFACFALDLEGHGRSE 102 (330)
T ss_pred ccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehh---HHHHHHHhC-CCEEEEecCCCCCCCC
Confidence 34445567788888999999998876432 35678999999986642 344 445556654 9999999999999997
Q ss_pred CCCc--cchhhhHHHHHHHHHHhCC-----CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchh
Q 018952 110 PDPK--RTRKSLALDIEELADQLGL-----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTK 182 (348)
Q Consensus 110 ~~~~--~~~~~~~~di~~~l~~l~~-----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~ 182 (348)
.... .+.+++++|+..+++.++. +.+++|+||||||.+++.++.++|++|+++|+++|.........+ ...
T Consensus 103 ~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~- 180 (330)
T PLN02298 103 GLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRP-PWP- 180 (330)
T ss_pred CccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCC-chH-
Confidence 5433 3788999999999998853 247999999999999999999999999999999986432110000 000
Q ss_pred hhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHH-HhhhhhhhhhhhhHHHHHH
Q 018952 183 EAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVR-QINRAQVIQQGVHESLFRD 261 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 261 (348)
............+.. .......... ..... .....+... +..................
T Consensus 181 --------~~~~~~~~~~~~~~~-------~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (330)
T PLN02298 181 --------IPQILTFVARFLPTL-------AIVPTADLLE---KSVKV---PAKKIIAKRNPMRYNGKPRLGTVVELLRV 239 (330)
T ss_pred --------HHHHHHHHHHHCCCC-------ccccCCCccc---ccccC---HHHHHHHHhCccccCCCccHHHHHHHHHH
Confidence 000000000011000 0000000000 00000 000000000 0000000000000000000
Q ss_pred hhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCC--CceEEEeCCCCcceeeC-cc----hHHH
Q 018952 262 MMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIADA-DG----MTEA 334 (348)
Q Consensus 262 ~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e-p~----~~~~ 334 (348)
.. .+...+.++++|+|+++|++|.++|++.++.+++.++ ++++++++++||.++.+ |+ .+.+
T Consensus 240 ~~-----------~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~ 308 (330)
T PLN02298 240 TD-----------YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRR 308 (330)
T ss_pred HH-----------HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHH
Confidence 00 1122355667779999999999999999999988874 78999999999999875 64 4666
Q ss_pred HHHHHhccc
Q 018952 335 IIKALLLGE 343 (348)
Q Consensus 335 ~i~~fl~~~ 343 (348)
.+.+||++.
T Consensus 309 ~i~~fl~~~ 317 (330)
T PLN02298 309 DILSWLNER 317 (330)
T ss_pred HHHHHHHHh
Confidence 777887653
No 20
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=6.2e-32 Score=220.62 Aligned_cols=260 Identities=16% Similarity=0.175 Sum_probs=162.3
Q ss_pred eeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc--cchhh
Q 018952 41 RIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK--RTRKS 118 (348)
Q Consensus 41 ~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~ 118 (348)
.+...||.++.|+.+-++ +..++.|+++||+++++..|. .+++.|.++ ||+|+++|+||||.|+.... .++.+
T Consensus 4 ~~~~~~g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~~~---~~~~~l~~~-g~~via~D~~G~G~S~~~~~~~~~~~~ 78 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI-TYPKALVFISHGAGEHSGRYE---ELAENISSL-GILVFSHDHIGHGRSNGEKMMIDDFGV 78 (276)
T ss_pred eeecCCCCEEEEEeccCC-CCCCEEEEEeCCCccccchHH---HHHHHHHhC-CCEEEEccCCCCCCCCCccCCcCCHHH
Confidence 455679999999998553 345677777899999999999 888888775 89999999999999975331 25566
Q ss_pred hHHHHHHHHHHhC---CCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHH
Q 018952 119 LALDIEELADQLG---LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWA 195 (348)
Q Consensus 119 ~~~di~~~l~~l~---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (348)
+++|+.+.++.+. .+++++++||||||.+++.+|.++|++++++|+++|..... ... . .
T Consensus 79 ~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~------~~~---~---------~ 140 (276)
T PHA02857 79 YVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAE------AVP---R---------L 140 (276)
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccc------ccc---H---------H
Confidence 6777777766542 12589999999999999999999999999999999864310 000 0 0
Q ss_pred HHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCC
Q 018952 196 LRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMD 275 (348)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (348)
....... ........... ...+........+ .......+................... ..
T Consensus 141 ~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~ 200 (276)
T PHA02857 141 NLLAAKL---MGIFYPNKIVG-----KLCPESVSRDMDE-VYKYQYDPLVNHEKIKAGFASQVLKAT-----------NK 200 (276)
T ss_pred HHHHHHH---HHHhCCCCccC-----CCCHhhccCCHHH-HHHHhcCCCccCCCccHHHHHHHHHHH-----------HH
Confidence 0000000 00000000000 0000000000000 000000000000000000000000000 01
Q ss_pred cCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC-CCceEEEeCCCCcceeeC-c---chHHHHHHHHhccc
Q 018952 276 LENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL-PWIRYHEIPGSGHLIADA-D---GMTEAIIKALLLGE 343 (348)
Q Consensus 276 ~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e-p---~~~~~~i~~fl~~~ 343 (348)
+...++++++|+|+++|++|.++|++.++++.+.+ +++++.+++++||.++.| + +++.+.+.+||++.
T Consensus 201 ~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 201 VRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 22346677788999999999999999999999887 468999999999999987 4 56888888998774
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=3e-32 Score=220.70 Aligned_cols=254 Identities=18% Similarity=0.217 Sum_probs=162.9
Q ss_pred EEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCC--CccchhhhHHHHHHHH
Q 018952 50 LAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPD--PKRTRKSLALDIEELA 127 (348)
Q Consensus 50 l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~--~~~~~~~~~~di~~~l 127 (348)
++|..+|++. ..+|+||++||+++++..|. .++..+.+ +|+|+++|+||||.|..+ ..++.+++++++.+++
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~~~~---~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i 74 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGSYWA---PQLDVLTQ--RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLL 74 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchhHHH---HHHHHHHh--ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence 4677887643 34689999999999999998 77777664 599999999999999754 3468999999999999
Q ss_pred HHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhh
Q 018952 128 DQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAY 207 (348)
Q Consensus 128 ~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (348)
++++. ++++++||||||.+++.++.++|++|+++|++++..... .. ....+... ..+... ........
T Consensus 75 ~~~~~-~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~-----~~-~~~~~~~~---~~~~~~--~~~~~~~~ 142 (257)
T TIGR03611 75 DALNI-ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD-----PH-TRRCFDVR---IALLQH--AGPEAYVH 142 (257)
T ss_pred HHhCC-CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC-----hh-HHHHHHHH---HHHHhc--cCcchhhh
Confidence 99998 799999999999999999999999999999999754310 00 00000000 000000 00000000
Q ss_pred hhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcE
Q 018952 208 WWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSV 287 (348)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pv 287 (348)
... ....+ .......... ......... ............. ... . ..+....+.++++|+
T Consensus 143 ~~~-~~~~~--------~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~-~~~-~--------~~~~~~~~~~i~~P~ 201 (257)
T TIGR03611 143 AQA-LFLYP--------ADWISENAAR-LAADEAHAL-AHFPGKANVLRRI-NAL-E--------AFDVSARLDRIQHPV 201 (257)
T ss_pred hhh-hhhcc--------ccHhhccchh-hhhhhhhcc-cccCccHHHHHHH-HHH-H--------cCCcHHHhcccCccE
Confidence 000 00000 0000000000 000000000 0000000000000 000 0 012233456678889
Q ss_pred EEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 288 HLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 288 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
++++|++|..+|++.++++.+.+++++++.++++||+++.+ |+++++.|.+||+.
T Consensus 202 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 202 LLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999987 99999999999863
No 22
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=6.7e-32 Score=226.15 Aligned_cols=269 Identities=16% Similarity=0.063 Sum_probs=160.2
Q ss_pred CCeEEEEeeccCCccCCCceEEEEcCCCCCch------------hhhhhhcccH---HHHhhcCcEEEEEcCCCCCCCCC
Q 018952 46 DGRHLAYKEHGVSKELAKYKIIFVHGFGSSRH------------DAAIAANLSP---EVVDELGIYIVSFDRPGYGESDP 110 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~------------~~~~~~~~~~---~l~~~~g~~vi~~D~~G~G~S~~ 110 (348)
+|.+++|...|++ ++++||+||+.++.. .|. +++. .|..+ +|+||++|+||||.|..
T Consensus 44 ~~~~l~y~~~G~~----~~p~vll~g~~~~~~~~~~~~~~~~~~~w~---~~v~~~~~L~~~-~~~Vi~~Dl~G~g~s~~ 115 (343)
T PRK08775 44 EDLRLRYELIGPA----GAPVVFVAGGISAHRHVAATATFPEKGWWE---GLVGSGRALDPA-RFRLLAFDFIGADGSLD 115 (343)
T ss_pred CCceEEEEEeccC----CCCEEEEecCCCcccccccccCCCCCCcch---hccCCCCccCcc-ccEEEEEeCCCCCCCCC
Confidence 7899999999863 345777776666555 687 7775 45333 59999999999998853
Q ss_pred CCccchhhhHHHHHHHHHHhCCCCe-EEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhc--
Q 018952 111 DPKRTRKSLALDIEELADQLGLGSK-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYL-- 187 (348)
Q Consensus 111 ~~~~~~~~~~~di~~~l~~l~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~-- 187 (348)
..++.+++++|+.++++++++ ++ ++++||||||++++.+|.++|++|+++|++++..... +..........
T Consensus 116 -~~~~~~~~a~dl~~ll~~l~l-~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~----~~~~~~~~~~~~~ 189 (343)
T PRK08775 116 -VPIDTADQADAIALLLDALGI-ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAH----PYAAAWRALQRRA 189 (343)
T ss_pred -CCCCHHHHHHHHHHHHHHcCC-CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCC----HHHHHHHHHHHHH
Confidence 356889999999999999999 55 5899999999999999999999999999999864210 00000000000
Q ss_pred --ccc----hhHHHHHHhhh-chhh-hhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHh-hhhhhhhhhhhHHH
Q 018952 188 --QLP----QDQWALRVAHY-APWL-AYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQI-NRAQVIQQGVHESL 258 (348)
Q Consensus 188 --~~~----~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 258 (348)
... ........... .... ........ +.. ...............+..... ..............
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 262 (343)
T PRK08775 190 VALGQLQCAEKHGLALARQLAMLSYRTPEEFEER-FDA------PPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRL 262 (343)
T ss_pred HHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHH-hCC------CccccCCCccchHHHHHHHHHHHHHHhcChhHHHHH
Confidence 000 00000000000 0000 00000000 000 000000000000010100000 00000000000011
Q ss_pred HHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC-CCceEEEeCC-CCcceeeC-cchHHHH
Q 018952 259 FRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL-PWIRYHEIPG-SGHLIADA-DGMTEAI 335 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~e-p~~~~~~ 335 (348)
..... .-...++++++|+|+|+|++|.++|++..+++.+.+ |+++++++++ +||+++.| |++|++.
T Consensus 263 ~~~~~-----------~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~ 331 (343)
T PRK08775 263 SESID-----------LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAI 331 (343)
T ss_pred HHHHh-----------hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHH
Confidence 11000 001225678888999999999999999999999888 7999999985 99999998 9999999
Q ss_pred HHHHhcccccc
Q 018952 336 IKALLLGEKVT 346 (348)
Q Consensus 336 i~~fl~~~~~~ 346 (348)
|.+||++...+
T Consensus 332 l~~FL~~~~~~ 342 (343)
T PRK08775 332 LTTALRSTGET 342 (343)
T ss_pred HHHHHHhcccc
Confidence 99999876543
No 23
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=1.3e-31 Score=224.73 Aligned_cols=282 Identities=17% Similarity=0.140 Sum_probs=159.4
Q ss_pred CCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhccc---HHHHhhcCcEEEEEcCCCCCCCCCCC----ccchhh
Q 018952 46 DGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLS---PEVVDELGIYIVSFDRPGYGESDPDP----KRTRKS 118 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~---~~l~~~~g~~vi~~D~~G~G~S~~~~----~~~~~~ 118 (348)
+|.+++|...|++.....|+||++||++++...|. .++ +.+..+ +|+||++|+||||.|+.+. .++.++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~---~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 99 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNE---WLIGPGRALDPE-KYFIIIPNMFGNGLSSSPSNTPAPFNAAR 99 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccch---hhccCCCccCcC-ceEEEEecCCCCCCCCCCCCCCCCCCCCC
Confidence 68889999999753233467778888887777776 433 345433 6999999999999997543 234433
Q ss_pred -----hHHHHHH----HHHHhCCCCe-EEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccc-hhhhhhc
Q 018952 119 -----LALDIEE----LADQLGLGSK-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANL-TKEAYYL 187 (348)
Q Consensus 119 -----~~~di~~----~l~~l~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~-~~~~~~~ 187 (348)
+++|+.. +++++++ ++ ++||||||||++|+.+|.++|++|+++|++++..... +... .......
T Consensus 100 ~~~~~~~~~~~~~~~~l~~~lgi-~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~----~~~~~~~~~~~~ 174 (339)
T PRK07581 100 FPHVTIYDNVRAQHRLLTEKFGI-ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTT----PHNFVFLEGLKA 174 (339)
T ss_pred CCceeHHHHHHHHHHHHHHHhCC-CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCC----HHHHHHHHHHHH
Confidence 5666665 7788999 78 5899999999999999999999999999998753210 0000 0000000
Q ss_pred cc-chhHH---------HHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHH
Q 018952 188 QL-PQDQW---------ALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHES 257 (348)
Q Consensus 188 ~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (348)
.. ....+ ...................++..... ...... ...+........... .........
T Consensus 175 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~ 247 (339)
T PRK07581 175 ALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELW---RAMGYA-SLEDFLVGFWEGNFL---PRDPNNLLA 247 (339)
T ss_pred HHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhc---cccChh-hHHHHHHHHHHHhhc---ccCcccHHH
Confidence 00 00000 00000000000000000000000000 000000 000000000000000 000000001
Q ss_pred HHHHhhh-cCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCC-CCcceeeC-cchHHH
Q 018952 258 LFRDMMI-GFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPG-SGHLIADA-DGMTEA 334 (348)
Q Consensus 258 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e-p~~~~~ 334 (348)
....... ..........+....++++++|+|+|+|++|..+|++..+.+++.+|+++++++++ +||+++.| ++++++
T Consensus 248 ~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~ 327 (339)
T PRK07581 248 MLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIA 327 (339)
T ss_pred HHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHH
Confidence 0000000 00000000012334566788899999999999999999999999999999999998 99999998 999999
Q ss_pred HHHHHhccc
Q 018952 335 IIKALLLGE 343 (348)
Q Consensus 335 ~i~~fl~~~ 343 (348)
.|.+||++.
T Consensus 328 ~~~~~~~~~ 336 (339)
T PRK07581 328 FIDAALKEL 336 (339)
T ss_pred HHHHHHHHH
Confidence 999999864
No 24
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.98 E-value=1.5e-30 Score=203.57 Aligned_cols=129 Identities=18% Similarity=0.261 Sum_probs=109.3
Q ss_pred CCcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc-
Q 018952 35 PAITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK- 113 (348)
Q Consensus 35 ~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~- 113 (348)
.+.+...+.+.++..+....... ....++++|++||+|++...|. .-++.|++. +.|+++|++|+|+|+.|.-
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~~-~~~~~~plVliHGyGAg~g~f~---~Nf~~La~~--~~vyaiDllG~G~SSRP~F~ 136 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVSN-ESANKTPLVLIHGYGAGLGLFF---RNFDDLAKI--RNVYAIDLLGFGRSSRPKFS 136 (365)
T ss_pred CCcceeeeecCCCceeEEEeecc-cccCCCcEEEEeccchhHHHHH---Hhhhhhhhc--CceEEecccCCCCCCCCCCC
Confidence 34556667777777776655533 3366899999999999999999 889999985 8899999999999997641
Q ss_pred ----cchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 114 ----RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 114 ----~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
.....+++-|+++.+..++ ++.+|+|||+||++|..||.+||++|+.+||++|.+.
T Consensus 137 ~d~~~~e~~fvesiE~WR~~~~L-~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf 196 (365)
T KOG4409|consen 137 IDPTTAEKEFVESIEQWRKKMGL-EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGF 196 (365)
T ss_pred CCcccchHHHHHHHHHHHHHcCC-cceeEeeccchHHHHHHHHHhChHhhceEEEeccccc
Confidence 2456889999999999999 8999999999999999999999999999999999764
No 25
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=5e-31 Score=221.60 Aligned_cols=288 Identities=17% Similarity=0.138 Sum_probs=162.9
Q ss_pred CCCeEEEEeeccCCccCCCceEEEEcCCCCCch-----------hhhhhhcccH---HHHhhcCcEEEEEcCCC--CCCC
Q 018952 45 RDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRH-----------DAAIAANLSP---EVVDELGIYIVSFDRPG--YGES 108 (348)
Q Consensus 45 ~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~-----------~~~~~~~~~~---~l~~~~g~~vi~~D~~G--~G~S 108 (348)
.+|.+++|..+|+++...+++||++||++++.. .|. .++. .+..+ +|+|+++|+|| ||.|
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~---~~~~~~~~l~~~-~~~vi~~D~~G~~~g~s 88 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWD---DLIGPGRAIDTD-RYFVVCSNVLGGCYGST 88 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchh---hccCCCCCcCCC-ceEEEEecCCCCCCCCC
Confidence 378999999999754344679999999999763 366 5542 44343 69999999999 5666
Q ss_pred CCC-------------CccchhhhHHHHHHHHHHhCCCCe-EEEEEeccchHHHHHHHHHhhcccceeEEecccccccCC
Q 018952 109 DPD-------------PKRTRKSLALDIEELADQLGLGSK-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWP 174 (348)
Q Consensus 109 ~~~-------------~~~~~~~~~~di~~~l~~l~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~ 174 (348)
.+. ..++++++++|+.++++++++ ++ ++++||||||.+++.+|.++|++|+++|++++.......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (351)
T TIGR01392 89 GPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI-EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAW 167 (351)
T ss_pred CCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHH
Confidence 431 136889999999999999999 77 999999999999999999999999999999986431100
Q ss_pred CCCccch-hhhhhcccc------h----hHHHHHHhhhchhh--hhhhhhccCCCCCcccccCccc--chhhhhcchHHH
Q 018952 175 GFPANLT-KEAYYLQLP------Q----DQWALRVAHYAPWL--AYWWNTQKLFPPSAVVARRPEI--FSAQDVQLMPKL 239 (348)
Q Consensus 175 ~~~~~~~-~~~~~~~~~------~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 239 (348)
....... ......... . .............. ........++.........+.. ......+.+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
T TIGR01392 168 CIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRY 247 (351)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHH
Confidence 0000000 000000000 0 00000000000000 0000000000000000000000 000000000000
Q ss_pred HHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEE---
Q 018952 240 AVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYH--- 316 (348)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~--- 316 (348)
....... ......+......... . +......++...+++|++|+|+|+|++|.++|++.++.+++.++++++.
T Consensus 248 ~~~~~~~--~~d~~~~~~~~~~l~~-~-d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~ 323 (351)
T TIGR01392 248 QGDKFVD--RFDANSYLYLTRALDT-H-DLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTY 323 (351)
T ss_pred HHHHHHh--hcCcchHHHHHHHHHh-c-CCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEE
Confidence 0000000 0000001011111100 0 0000001223456778888999999999999999999999999988765
Q ss_pred --EeCCCCcceeeC-cchHHHHHHHHhc
Q 018952 317 --EIPGSGHLIADA-DGMTEAIIKALLL 341 (348)
Q Consensus 317 --~~~~~gH~~~~e-p~~~~~~i~~fl~ 341 (348)
+++++||+++.| |+++++.|.+||+
T Consensus 324 ~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 324 VEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred EEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 567899999998 9999999999985
No 26
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=4.6e-31 Score=215.53 Aligned_cols=284 Identities=21% Similarity=0.257 Sum_probs=171.1
Q ss_pred cccceeecCCCe-EEEEeeccCC------ccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCC
Q 018952 37 ITAPRIKLRDGR-HLAYKEHGVS------KELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESD 109 (348)
Q Consensus 37 ~~~~~~~~~~g~-~l~y~~~g~~------~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~ 109 (348)
.+...+....|. .+...++|.. ....+++||++|||+++...|+ .++..+.+..|++|+++|++|+|.++
T Consensus 25 ~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~---~~~~~L~~~~~~~v~aiDl~G~g~~s 101 (326)
T KOG1454|consen 25 LRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWR---RVVPLLSKAKGLRVLAIDLPGHGYSS 101 (326)
T ss_pred ccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHh---hhccccccccceEEEEEecCCCCcCC
Confidence 345556666663 5666666554 1136899999999999999999 99999998878999999999999554
Q ss_pred C-CC--ccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeE---EecccccccCCCCCccchhh
Q 018952 110 P-DP--KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAA---LIAPVINYWWPGFPANLTKE 183 (348)
Q Consensus 110 ~-~~--~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~i---l~~~~~~~~~~~~~~~~~~~ 183 (348)
. +. .|+..++++.+..+....+. ++++++|||+||.+|+.+|+.+|+.|++++ ++++....... .......
T Consensus 102 ~~~~~~~y~~~~~v~~i~~~~~~~~~-~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~--~~~~~~~ 178 (326)
T KOG1454|consen 102 PLPRGPLYTLRELVELIRRFVKEVFV-EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPK--GIKGLRR 178 (326)
T ss_pred CCCCCCceehhHHHHHHHHHHHhhcC-cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCc--chhHHHH
Confidence 3 32 37899999999999999988 789999999999999999999999999999 55443221000 0000000
Q ss_pred hhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhh
Q 018952 184 AYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMM 263 (348)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (348)
...................+. ................... ...+........ .......++..
T Consensus 179 ~~~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----------~~~~~~~~~~~ 241 (326)
T KOG1454|consen 179 LLDKFLSALELLIPLSLTEPV---RLVSEGLLRCLKVVYTDPS----RLLEKLLHLLSR----------PVKEHFHRDAR 241 (326)
T ss_pred hhhhhccHhhhcCccccccch---hheeHhhhcceeeeccccc----cchhhhhhheec----------ccccchhhhhe
Confidence 000000000000000000000 0000000000000000000 000000000000 00000000000
Q ss_pred hcCC-ccccCCCCcCCCCCCCC-CcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHh
Q 018952 264 IGFG-TWEFDPMDLENPFPNSE-GSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALL 340 (348)
Q Consensus 264 ~~~~-~~~~~~~~~~~p~~~~~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl 340 (348)
..+. ............++++. ||+++++|++|+++|.+.++.+.+.+|++++++++++||.++.| |+++++.|..|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi 321 (326)
T KOG1454|consen 242 LSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFI 321 (326)
T ss_pred eeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHH
Confidence 0000 00000011222345555 88999999999999999999999999999999999999999999 999999999999
Q ss_pred ccc
Q 018952 341 LGE 343 (348)
Q Consensus 341 ~~~ 343 (348)
...
T Consensus 322 ~~~ 324 (326)
T KOG1454|consen 322 ARL 324 (326)
T ss_pred HHh
Confidence 764
No 27
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=1.4e-30 Score=210.12 Aligned_cols=248 Identities=19% Similarity=0.261 Sum_probs=162.5
Q ss_pred EEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-ccchhhhHHHHHHHHH
Q 018952 50 LAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDIEELAD 128 (348)
Q Consensus 50 l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di~~~l~ 128 (348)
++|...|++ +.+|+|||+||++++...|. .+++.+.. ||+|+++|+||||.|+.+. .++++++++|+.++++
T Consensus 2 ~~~~~~g~~--~~~~~li~~hg~~~~~~~~~---~~~~~l~~--~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~ 74 (251)
T TIGR02427 2 LHYRLDGAA--DGAPVLVFINSLGTDLRMWD---PVLPALTP--DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLD 74 (251)
T ss_pred ceEEeecCC--CCCCeEEEEcCcccchhhHH---HHHHHhhc--ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 677777754 24689999999999999999 88777754 6999999999999997543 4689999999999999
Q ss_pred HhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhh
Q 018952 129 QLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYW 208 (348)
Q Consensus 129 ~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (348)
.++. ++++++|||+||.+++.+|.++|++++++|++++...... ... ....... ...... .........
T Consensus 75 ~~~~-~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~---~~~-~~~~~~~-~~~~~~----~~~~~~~~~- 143 (251)
T TIGR02427 75 HLGI-ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGT---PES-WNARIAA-VRAEGL----AALADAVLE- 143 (251)
T ss_pred HhCC-CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCc---hhh-HHHHHhh-hhhccH----HHHHHHHHH-
Confidence 9998 7999999999999999999999999999999987532110 000 0000000 000000 000000000
Q ss_pred hhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEE
Q 018952 209 WNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVH 288 (348)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl 288 (348)
.++... +..........+....... . ...+....... ...+....+.++++|++
T Consensus 144 ----~~~~~~---------~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~---------~~~~~~~~~~~~~~Pvl 197 (251)
T TIGR02427 144 ----RWFTPG---------FREAHPARLDLYRNMLVRQ---P-PDGYAGCCAAI---------RDADFRDRLGAIAVPTL 197 (251)
T ss_pred ----HHcccc---------cccCChHHHHHHHHHHHhc---C-HHHHHHHHHHH---------hcccHHHHhhhcCCCeE
Confidence 001000 0000000000000000000 0 00000000000 00122334566778899
Q ss_pred EEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhc
Q 018952 289 LWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 341 (348)
Q Consensus 289 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 341 (348)
+++|++|.++|.+..+.+.+.+++.++++++++||+++.+ |+++.+.+.+|++
T Consensus 198 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 198 CIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999998 9999999999974
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.7e-30 Score=219.81 Aligned_cols=292 Identities=18% Similarity=0.105 Sum_probs=163.8
Q ss_pred CCeEEEEeeccCCccCCCceEEEEcCCCCCchh-------------hhhhhcccH---HHHhhcCcEEEEEcCCCC-CCC
Q 018952 46 DGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHD-------------AAIAANLSP---EVVDELGIYIVSFDRPGY-GES 108 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~-------------~~~~~~~~~---~l~~~~g~~vi~~D~~G~-G~S 108 (348)
+|.+++|..+|.++...+|+|||+||++++... |. .++. .+..+ +|+||++|++|+ |.|
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~---~~~~~~~~l~~~-~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWD---NMVGPGKPIDTD-RYFVICSNVLGGCKGS 106 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchh---hccCCCCccCcc-ceEEEeccCCCCCCCC
Confidence 567789999997543446899999999999885 55 4442 33233 699999999983 444
Q ss_pred CCC---------------CccchhhhHHHHHHHHHHhCCCCe-EEEEEeccchHHHHHHHHHhhcccceeEEeccccccc
Q 018952 109 DPD---------------PKRTRKSLALDIEELADQLGLGSK-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYW 172 (348)
Q Consensus 109 ~~~---------------~~~~~~~~~~di~~~l~~l~~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~ 172 (348)
+.+ +.++++++++++.++++++++ ++ ++++||||||.+++.+|.++|++|+++|++++.....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 185 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI-TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLS 185 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC-CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccC
Confidence 321 146899999999999999999 67 5999999999999999999999999999999764321
Q ss_pred CCCCCccc-hhhhhhcc-c----------chhHHHHHHhhhch--hhhhhhhhccCCCCCcccccCcccchhhhhcchHH
Q 018952 173 WPGFPANL-TKEAYYLQ-L----------PQDQWALRVAHYAP--WLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPK 238 (348)
Q Consensus 173 ~~~~~~~~-~~~~~~~~-~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (348)
........ ........ . .............. ...........+.............. .......
T Consensus 186 ~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~--~~~~~~~ 263 (379)
T PRK00175 186 AQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFD--VEFQVES 263 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCC--ccchHHH
Confidence 00000000 00000000 0 00000000000000 00000000001110000000000000 0000000
Q ss_pred HHHHHh-hhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCc----
Q 018952 239 LAVRQI-NRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWI---- 313 (348)
Q Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~---- 313 (348)
+..... ..........+......... ...-.....++...+++|++|+|+|+|++|.++|++..+.+++.++++
T Consensus 264 ~l~~~~~~~~~~~d~~~~~~~~~~~~~-~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~ 342 (379)
T PRK00175 264 YLRYQGDKFVERFDANSYLYLTRALDY-FDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADV 342 (379)
T ss_pred HHHHHHHHHhhccCchHHHHHHHHHHh-ccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCe
Confidence 000000 00000000000111111000 000000001233446778888999999999999999999999999887
Q ss_pred eEEEeC-CCCcceeeC-cchHHHHHHHHhccccc
Q 018952 314 RYHEIP-GSGHLIADA-DGMTEAIIKALLLGEKV 345 (348)
Q Consensus 314 ~~~~~~-~~gH~~~~e-p~~~~~~i~~fl~~~~~ 345 (348)
++++++ ++||+++.| |+++++.|.+||++...
T Consensus 343 ~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 343 SYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred EEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 778775 899999998 99999999999987643
No 29
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=1e-29 Score=205.77 Aligned_cols=272 Identities=18% Similarity=0.181 Sum_probs=180.9
Q ss_pred CcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCC-CCCc-
Q 018952 36 AITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESD-PDPK- 113 (348)
Q Consensus 36 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~-~~~~- 113 (348)
...+..+...||..++|..+-... ..+.+||++||.+.+..-|. .++..|... ||.|+++|+||||.|. ....
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~-~~~g~Vvl~HG~~Eh~~ry~---~la~~l~~~-G~~V~~~D~RGhG~S~r~~rg~ 82 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE-PPKGVVVLVHGLGEHSGRYE---ELADDLAAR-GFDVYALDLRGHGRSPRGQRGH 82 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC-CCCcEEEEecCchHHHHHHH---HHHHHHHhC-CCEEEEecCCCCCCCCCCCcCC
Confidence 345667778899999999985543 33479999999999999999 888888886 9999999999999997 3332
Q ss_pred -cchhhhHHHHHHHHHHhC---CCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhccc
Q 018952 114 -RTRKSLALDIEELADQLG---LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQL 189 (348)
Q Consensus 114 -~~~~~~~~di~~~l~~l~---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (348)
.++.++.+|+..+++... .+.+++++||||||.+++.++.+++.+++++|+.+|...... .....
T Consensus 83 ~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~-----~~~~~------ 151 (298)
T COG2267 83 VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG-----AILRL------ 151 (298)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh-----hHHHH------
Confidence 368999999999999885 247999999999999999999999999999999999864210 00000
Q ss_pred chhHHHHHHhhhchhhhhhhhhccCCCCCcccc----cCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhc
Q 018952 190 PQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVA----RRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIG 265 (348)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (348)
.......... ..+.+...... .........+.+..+.+...+....................
T Consensus 152 ---~~~~~~~~~~---------~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~-- 217 (298)
T COG2267 152 ---ILARLALKLL---------GRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR-- 217 (298)
T ss_pred ---HHHHHhcccc---------cccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc--
Confidence 0000000000 00111100110 11112222333444444444332111111111111111110
Q ss_pred CCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCC-hHHHHHHHhhC--CCceEEEeCCCCcceeeC--c--chHHHHHHH
Q 018952 266 FGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVP-VILQRYISKKL--PWIRYHEIPGSGHLIADA--D--GMTEAIIKA 338 (348)
Q Consensus 266 ~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e--p--~~~~~~i~~ 338 (348)
.....+...+++|+|+++|++|.+++ .+...++.+.. +++++++++|+.|.++.| . +++.+.+.+
T Consensus 218 --------~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~ 289 (298)
T COG2267 218 --------VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILA 289 (298)
T ss_pred --------ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHH
Confidence 01223355677889999999999999 68777777766 667899999999999997 4 778888889
Q ss_pred Hhccccc
Q 018952 339 LLLGEKV 345 (348)
Q Consensus 339 fl~~~~~ 345 (348)
|+.+...
T Consensus 290 ~l~~~~~ 296 (298)
T COG2267 290 WLAEALP 296 (298)
T ss_pred HHHhhcc
Confidence 9877654
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=3.8e-30 Score=206.20 Aligned_cols=237 Identities=16% Similarity=0.185 Sum_probs=146.6
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEec
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFS 142 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 142 (348)
+|+|||+||++++...|. .+++.+ + +|+|+++|+||||.|+.+...+++++++|+.+++++++. ++++++|||
T Consensus 2 ~p~vvllHG~~~~~~~w~---~~~~~l-~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvG~S 74 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQ---PVGEAL-P--DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNI-LPYWLVGYS 74 (242)
T ss_pred CCEEEEECCCCCChHHHH---HHHHHc-C--CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCC-CCeEEEEEC
Confidence 478999999999999999 888876 3 599999999999999877667999999999999999998 899999999
Q ss_pred cchHHHHHHHHHhhcc-cceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhh-hchhhhhhhhhccCCCCCcc
Q 018952 143 MGGQVVWSCLKYISHR-LTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAH-YAPWLAYWWNTQKLFPPSAV 220 (348)
Q Consensus 143 ~Gg~ia~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 220 (348)
|||.+++.+|.++|+. |++++++++... ....... .........+...... ........+.....+.
T Consensus 75 ~Gg~va~~~a~~~~~~~v~~lvl~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 143 (242)
T PRK11126 75 LGGRIAMYYACQGLAGGLCGLIVEGGNPG-----LQNAEER--QARWQNDRQWAQRFRQEPLEQVLADWYQQPVFA---- 143 (242)
T ss_pred HHHHHHHHHHHhCCcccccEEEEeCCCCC-----CCCHHHH--HHHHhhhHHHHHHhccCcHHHHHHHHHhcchhh----
Confidence 9999999999999764 999999986532 1111000 0000000011110000 0000000000000000
Q ss_pred cccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCCh
Q 018952 221 VARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPV 300 (348)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~ 300 (348)
... .+....+...... ... .....+..... .. ...+....+.+++||+++|+|++|..+.
T Consensus 144 ------~~~---~~~~~~~~~~~~~---~~~-~~~~~~~~~~~--~~----~~~~~~~~l~~i~~P~lii~G~~D~~~~- 203 (242)
T PRK11126 144 ------SLN---AEQRQQLVAKRSN---NNG-AAVAAMLEATS--LA----KQPDLRPALQALTFPFYYLCGERDSKFQ- 203 (242)
T ss_pred ------ccC---ccHHHHHHHhccc---CCH-HHHHHHHHhcC--cc----cCCcHHHHhhccCCCeEEEEeCCcchHH-
Confidence 000 0000000000000 000 00000110000 00 0012333466788889999999998652
Q ss_pred HHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 301 ILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
.+.+. .++++++++++||+++.| |+++++.|.+|++.
T Consensus 204 ----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 204 ----ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred ----HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 23333 378999999999999998 99999999999975
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=7.3e-30 Score=210.23 Aligned_cols=263 Identities=17% Similarity=0.276 Sum_probs=160.1
Q ss_pred CCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC--c--cchhhhH
Q 018952 45 RDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP--K--RTRKSLA 120 (348)
Q Consensus 45 ~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~--~~~~~~~ 120 (348)
.+|.++.|...+.+ +.+++|||+||++++...|. ..+..++.+.||+|+++|+||||.|..+. . ++.++++
T Consensus 9 ~~~~~~~~~~~~~~--~~~~~vl~~hG~~g~~~~~~---~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 9 VDGGYHLFTKTGGE--GEKIKLLLLHGGPGMSHEYL---ENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred CCCCeEEEEeccCC--CCCCeEEEEcCCCCccHHHH---HHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 46777888877643 23689999999877665554 45555655558999999999999998642 2 6899999
Q ss_pred HHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccch-hhhhhcccchhHHHHHHh
Q 018952 121 LDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLT-KEAYYLQLPQDQWALRVA 199 (348)
Q Consensus 121 ~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 199 (348)
+|+.+++++++. ++++++||||||.+++.+|.++|++++++|++++.... +.... .......... .......
T Consensus 84 ~~~~~~~~~~~~-~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~ 156 (288)
T TIGR01250 84 DELEEVREKLGL-DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSA-----PEYVKELNRLRKELPP-EVRAAIK 156 (288)
T ss_pred HHHHHHHHHcCC-CcEEEEEeehHHHHHHHHHHhCccccceeeEecccccc-----hHHHHHHHHHHhhcCh-hHHHHHH
Confidence 999999999998 78999999999999999999999999999999875321 10000 0000000000 0000000
Q ss_pred hhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhh----hh---hhhhhhHHHHHHhhhcCCcc---
Q 018952 200 HYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRA----QV---IQQGVHESLFRDMMIGFGTW--- 269 (348)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~--- 269 (348)
. ......+. ..........+........ .. .............. ....+
T Consensus 157 ~--------~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 215 (288)
T TIGR01250 157 R--------CEASGDYD------------NPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQ-GPNEFTIT 215 (288)
T ss_pred H--------HHhccCcc------------hHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhccc-CCcccccc
Confidence 0 00000000 0000000000000000000 00 00000000000000 00000
Q ss_pred -ccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhc
Q 018952 270 -EFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 341 (348)
Q Consensus 270 -~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 341 (348)
.....++...++++++|+++++|++|.+ +++..+.+.+.++++++++++++||+++.| |+++++.|.+|++
T Consensus 216 ~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 216 GNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred ccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 0011123344677889999999999985 668888899999999999999999999998 9999999999985
No 32
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=1.8e-30 Score=208.70 Aligned_cols=240 Identities=16% Similarity=0.163 Sum_probs=148.8
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEec
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFS 142 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 142 (348)
+|+|||+||++++...|. .+++.|.+ +|+|+++|+||+|.|.....++++++++++.+.+ . ++++++|||
T Consensus 4 ~~~iv~~HG~~~~~~~~~---~~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~----~-~~~~lvG~S 73 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFR---CLDEELSA--HFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA----P-DPAIWLGWS 73 (245)
T ss_pred CceEEEEcCCCCchhhHH---HHHHhhcc--CeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC----C-CCeEEEEEc
Confidence 378999999999999999 88888865 5999999999999998766667777777766543 2 689999999
Q ss_pred cchHHHHHHHHHhhcccceeEEecccccccCCC-CCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCccc
Q 018952 143 MGGQVVWSCLKYISHRLTGAALIAPVINYWWPG-FPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVV 221 (348)
Q Consensus 143 ~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (348)
|||.+++.+|.++|++++++|++++...+.... .+......... .+..............+.....+.
T Consensus 74 ~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~----- 142 (245)
T TIGR01738 74 LGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLT------GFQQQLSDDYQRTIERFLALQTLG----- 142 (245)
T ss_pred HHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHH------HHHHHhhhhHHHHHHHHHHHHHhc-----
Confidence 999999999999999999999998764321100 00000000000 000000000000000000000000
Q ss_pred ccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChH
Q 018952 222 ARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVI 301 (348)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~ 301 (348)
.. ................ . ......+..... .. ...+....+.++++|+++++|++|.++|++
T Consensus 143 ---~~-~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~-~~-----~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~ 205 (245)
T TIGR01738 143 ---TP-TARQDARALKQTLLAR-----P--TPNVQVLQAGLE-IL-----ATVDLRQPLQNISVPFLRLYGYLDGLVPAK 205 (245)
T ss_pred ---CC-ccchHHHHHHHHhhcc-----C--CCCHHHHHHHHH-Hh-----hcccHHHHHhcCCCCEEEEeecCCcccCHH
Confidence 00 0000000000000000 0 000000000000 00 001222345677888999999999999999
Q ss_pred HHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHh
Q 018952 302 LQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALL 340 (348)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl 340 (348)
..+.+.+.++++++++++++||+++.| |+++++.|.+|+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 206 VVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred HHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 999999999999999999999999998 999999999985
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=2.6e-29 Score=203.00 Aligned_cols=261 Identities=14% Similarity=0.124 Sum_probs=160.1
Q ss_pred CCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC--ccchhhhHHH
Q 018952 45 RDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLALD 122 (348)
Q Consensus 45 ~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~d 122 (348)
.+|.++.|..- .+++|+|||+||++++...|. ++...|.+. ||+|+++|+||||.|...+ .+++++++++
T Consensus 4 ~~~~~~~~~~~----~~~~p~vvliHG~~~~~~~w~---~~~~~L~~~-g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~ 75 (273)
T PLN02211 4 ENGEEVTDMKP----NRQPPHFVLIHGISGGSWCWY---KIRCLMENS-GYKVTCIDLKSAGIDQSDADSVTTFDEYNKP 75 (273)
T ss_pred ccccccccccc----cCCCCeEEEECCCCCCcCcHH---HHHHHHHhC-CCEEEEecccCCCCCCCCcccCCCHHHHHHH
Confidence 46888887762 124789999999999999999 888877765 8999999999999886433 2699999999
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhc
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYA 202 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (348)
+.+++++++..++++++||||||.+++.++.++|++|+++|++++.... .+.. ....+... .
T Consensus 76 l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~--~g~~---~~~~~~~~-------------~ 137 (273)
T PLN02211 76 LIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK--LGFQ---TDEDMKDG-------------V 137 (273)
T ss_pred HHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC--CCCC---HHHHHhcc-------------c
Confidence 9999999853379999999999999999999999999999999875320 0000 00000000 0
Q ss_pred hhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCcc-ccCCCCcCCCCC
Q 018952 203 PWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTW-EFDPMDLENPFP 281 (348)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~ 281 (348)
+.+... ............... .........+........ . .... ........ ..... .+..........
T Consensus 138 ~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 207 (273)
T PLN02211 138 PDLSEF---GDVYELGFGLGPDQP---PTSAIIKKEFRRKILYQM-S-PQED-STLAAMLL-RPGPILALRSARFEEETG 207 (273)
T ss_pred cchhhh---ccceeeeeccCCCCC---CceeeeCHHHHHHHHhcC-C-CHHH-HHHHHHhc-CCcCcccccccccccccc
Confidence 000000 000000000000000 000000000000000000 0 0000 00000000 00000 000001111223
Q ss_pred CC-CCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 282 NS-EGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 282 ~~-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
++ ++|+++|.|++|..+|++.++.+.+.+++.+++.++ +||.++.+ |+++.+.|.++...
T Consensus 208 ~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 208 DIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred ccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 44 678999999999999999999999999999999996 89999998 99999999988654
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=2.4e-29 Score=211.48 Aligned_cols=263 Identities=16% Similarity=0.133 Sum_probs=164.9
Q ss_pred ceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc--cchh
Q 018952 40 PRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK--RTRK 117 (348)
Q Consensus 40 ~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~ 117 (348)
..+...+|..++|..+.+...+.+++||++||++++...|. .++..|.+. ||+|+++|+||||.|+.... .+.+
T Consensus 113 ~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~---~~a~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~ 188 (395)
T PLN02652 113 SLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYL---HFAKQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSLD 188 (395)
T ss_pred EEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHH---HHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCHH
Confidence 34555567788888887654456789999999999988898 888888765 99999999999999987543 3778
Q ss_pred hhHHHHHHHHHHhCC---CCeEEEEEeccchHHHHHHHHHhhc---ccceeEEecccccccCCCCCccchhhhhhcccch
Q 018952 118 SLALDIEELADQLGL---GSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQ 191 (348)
Q Consensus 118 ~~~~di~~~l~~l~~---~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (348)
++++|+..+++.++. +.+++++||||||.+++.++. +|+ +++++|+.+|..... +..
T Consensus 189 ~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~----~~~------------ 251 (395)
T PLN02652 189 YVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVK----PAH------------ 251 (395)
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccc----cch------------
Confidence 889999999998853 247999999999999997764 564 899999999864311 000
Q ss_pred hHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCcccc
Q 018952 192 DQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEF 271 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (348)
.......... ........+..... ...... .+..........+................+...
T Consensus 252 -~~~~~~~~l~----~~~~p~~~~~~~~~---~~~~~s-~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~-------- 314 (395)
T PLN02652 252 -PIVGAVAPIF----SLVAPRFQFKGANK---RGIPVS-RDPAALLAKYSDPLVYTGPIRVRTGHEILRISS-------- 314 (395)
T ss_pred -HHHHHHHHHH----HHhCCCCcccCccc---ccCCcC-CCHHHHHHHhcCCCcccCCchHHHHHHHHHHHH--------
Confidence 0000000000 00000000000000 000000 000000000000000000000000000000000
Q ss_pred CCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCC--CceEEEeCCCCcceeeC--cchHHHHHHHHhccc
Q 018952 272 DPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP--WIRYHEIPGSGHLIADA--DGMTEAIIKALLLGE 343 (348)
Q Consensus 272 ~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~~~ 343 (348)
.+...++++++|+|+++|++|.++|++.++++++..+ +++++++++++|.++.| ++++.+.+.+||+..
T Consensus 315 ---~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 315 ---YLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred ---HHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 1223456677889999999999999999999988864 47899999999999775 899999999999764
No 35
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=8.3e-29 Score=204.44 Aligned_cols=123 Identities=26% Similarity=0.385 Sum_probs=102.1
Q ss_pred ccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC---cc
Q 018952 38 TAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP---KR 114 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~ 114 (348)
.+.++...||.+++|...|+++ +++|||+||++++...+. +...+.. .+|+|+++|+||||.|+.+. .+
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~---~~~lvllHG~~~~~~~~~----~~~~~~~-~~~~vi~~D~~G~G~S~~~~~~~~~ 76 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPD---GKPVVFLHGGPGSGTDPG----CRRFFDP-ETYRIVLFDQRGCGKSTPHACLEEN 76 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCC---CCEEEEECCCCCCCCCHH----HHhccCc-cCCEEEEECCCCCCCCCCCCCcccC
Confidence 4578888899999999988643 578999999887765443 2222322 37999999999999998653 24
Q ss_pred chhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 115 TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 115 ~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
+.+++++|+..++++++. ++++++||||||.+++.++.++|++|+++|++++..
T Consensus 77 ~~~~~~~dl~~l~~~l~~-~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 77 TTWDLVADIEKLREKLGI-KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred CHHHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 678999999999999998 799999999999999999999999999999999764
No 36
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=6.2e-29 Score=190.93 Aligned_cols=269 Identities=16% Similarity=0.136 Sum_probs=177.9
Q ss_pred CcccceeecCCCeEEEEeeccCCc-cCCCceEEEEcCCCCCc-hhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc
Q 018952 36 AITAPRIKLRDGRHLAYKEHGVSK-ELAKYKIIFVHGFGSSR-HDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK 113 (348)
Q Consensus 36 ~~~~~~~~~~~g~~l~y~~~g~~~-~~~~~~vl~~hG~~~~~-~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~ 113 (348)
.....++...+|..+.+..|-+.. .+++..|+++||++... ..+. ..+..|+.. ||.|+++|++|||.|++...
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~---~~a~~l~~~-g~~v~a~D~~GhG~SdGl~~ 101 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQ---STAKRLAKS-GFAVYAIDYEGHGRSDGLHA 101 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHH---HHHHHHHhC-CCeEEEeeccCCCcCCCCcc
Confidence 356778888899999999986633 35677899999999875 5555 667777775 99999999999999997665
Q ss_pred c--chhhhHHHHHHHHHHhC-----CCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhh
Q 018952 114 R--TRKSLALDIEELADQLG-----LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYY 186 (348)
Q Consensus 114 ~--~~~~~~~di~~~l~~l~-----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 186 (348)
| +++..++|+....+... .+.+..++||||||.+++.++.++|+..+|+|+++|.........|......
T Consensus 102 yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~--- 178 (313)
T KOG1455|consen 102 YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVIS--- 178 (313)
T ss_pred cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHH---
Confidence 5 88999999999888652 2368999999999999999999999999999999998653222111111110
Q ss_pred cccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhh-hhhhhhHHHHHHhhhc
Q 018952 187 LQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQV-IQQGVHESLFRDMMIG 265 (348)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 265 (348)
.........|.+. ..+. .........+++.......++...... ......+.+....
T Consensus 179 -------~l~~l~~liP~wk-------~vp~-----~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~--- 236 (313)
T KOG1455|consen 179 -------ILTLLSKLIPTWK-------IVPT-----KDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTA--- 236 (313)
T ss_pred -------HHHHHHHhCCcee-------ecCC-----ccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHH---
Confidence 1111111111110 0010 000111112222222222222221111 1111111111111
Q ss_pred CCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC--CCceEEEeCCCCcceee-C-c---chHHHHHHH
Q 018952 266 FGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL--PWIRYHEIPGSGHLIAD-A-D---GMTEAIIKA 338 (348)
Q Consensus 266 ~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~-e-p---~~~~~~i~~ 338 (348)
++...++++++|.+++||++|.++.++.++.+++.. .+.+++.|||+-|..+. | + +.+...|.+
T Consensus 237 ---------~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~ 307 (313)
T KOG1455|consen 237 ---------DLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIIS 307 (313)
T ss_pred ---------HHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHH
Confidence 355567788888999999999999999999999988 46799999999999986 5 3 445555677
Q ss_pred Hhcc
Q 018952 339 LLLG 342 (348)
Q Consensus 339 fl~~ 342 (348)
||++
T Consensus 308 Wl~~ 311 (313)
T KOG1455|consen 308 WLDE 311 (313)
T ss_pred HHHh
Confidence 7764
No 37
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.97 E-value=1.2e-29 Score=181.74 Aligned_cols=250 Identities=18% Similarity=0.210 Sum_probs=173.3
Q ss_pred cccceeecCCCeEEEEeeccCCccCCCceEEEEcCC-CCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCcc-
Q 018952 37 ITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGF-GSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKR- 114 (348)
Q Consensus 37 ~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~-~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~- 114 (348)
..+..+.+ +|.+++|..+|.++ ..||+++|. |+...+|. +++..+.+...+.|+++|.||+|.|.+|...
T Consensus 21 ~te~kv~v-ng~ql~y~~~G~G~----~~iLlipGalGs~~tDf~---pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf 92 (277)
T KOG2984|consen 21 YTESKVHV-NGTQLGYCKYGHGP----NYILLIPGALGSYKTDFP---PQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF 92 (277)
T ss_pred hhhheeee-cCceeeeeecCCCC----ceeEecccccccccccCC---HHHHhcCCCCceEEEEECCCCCCCCCCCcccc
Confidence 34555665 89999999999864 578888885 55677788 8888887765689999999999999887642
Q ss_pred ---chhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccch
Q 018952 115 ---TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQ 191 (348)
Q Consensus 115 ---~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (348)
-+..-+++..++++.|+. +++.++|||-||..++..|+++++.|.++|+.++..- -.......+..+...
T Consensus 93 ~~~ff~~Da~~avdLM~aLk~-~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ay------vn~~~~ma~kgiRdv 165 (277)
T KOG2984|consen 93 EVQFFMKDAEYAVDLMEALKL-EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAY------VNHLGAMAFKGIRDV 165 (277)
T ss_pred hHHHHHHhHHHHHHHHHHhCC-CCeeEeeecCCCeEEEEeeccChhhhhhheeecccce------ecchhHHHHhchHHH
Confidence 345667788889999999 8999999999999999999999999999999997532 111111122222222
Q ss_pred hHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCcccc
Q 018952 192 DQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEF 271 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (348)
..|..+...- .......+.+.+.+.. +. +....+.. +
T Consensus 166 ~kWs~r~R~P-------------------------~e~~Yg~e~f~~~wa~---------------wv-D~v~qf~~--~ 202 (277)
T KOG2984|consen 166 NKWSARGRQP-------------------------YEDHYGPETFRTQWAA---------------WV-DVVDQFHS--F 202 (277)
T ss_pred hhhhhhhcch-------------------------HHHhcCHHHHHHHHHH---------------HH-HHHHHHhh--c
Confidence 2221111100 0000001111111110 00 00000000 0
Q ss_pred CCCC-cCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcccc
Q 018952 272 DPMD-LENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEK 344 (348)
Q Consensus 272 ~~~~-~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~ 344 (348)
...+ -+.-+++++||+++++|+.|++++...+.-+....+.+++.++|.++|.++.. +++|+..+.+||++.+
T Consensus 203 ~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~~ 277 (277)
T KOG2984|consen 203 CDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKSTE 277 (277)
T ss_pred CCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhccC
Confidence 0001 22347899999999999999999999988888888999999999999999998 9999999999998753
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.4e-28 Score=208.77 Aligned_cols=121 Identities=18% Similarity=0.236 Sum_probs=96.0
Q ss_pred eeecCCCe--EEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc-c-c-
Q 018952 41 RIKLRDGR--HLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK-R-T- 115 (348)
Q Consensus 41 ~~~~~~g~--~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-~-~- 115 (348)
.+...+|. ++.+..+.. + ..+|+|||+||++++...|. ..+..|.+ +|+|+++|+||||.|+.+.. . +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-~-~~~p~vvllHG~~~~~~~~~---~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~ 155 (402)
T PLN02894 83 WFRSASNEPRFINTVTFDS-K-EDAPTLVMVHGYGASQGFFF---RNFDALAS--RFRVIAIDQLGWGGSSRPDFTCKST 155 (402)
T ss_pred ceecccCcCCeEEEEEecC-C-CCCCEEEEECCCCcchhHHH---HHHHHHHh--CCEEEEECCCCCCCCCCCCcccccH
Confidence 34444443 566655532 2 35789999999999999998 78888776 49999999999999986432 1 1
Q ss_pred ---hhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 116 ---RKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 116 ---~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
.+.+++++.++++.++. ++++++||||||.+++.+|.++|++|+++|+++|..
T Consensus 156 ~~~~~~~~~~i~~~~~~l~~-~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 156 EETEAWFIDSFEEWRKAKNL-SNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHHHHcCC-CCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 12356788888888998 799999999999999999999999999999999864
No 39
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=6e-29 Score=197.47 Aligned_cols=222 Identities=25% Similarity=0.354 Sum_probs=144.6
Q ss_pred EEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC---ccchhhhHHHHHHHHHHhCCCCeEEEEEec
Q 018952 66 IIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP---KRTRKSLALDIEELADQLGLGSKFYVVGFS 142 (348)
Q Consensus 66 vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 142 (348)
|||+||++++...|. .+++.|. + ||+|+++|+||+|.|+.+. .++++++++|+.+++++++. ++++++|||
T Consensus 1 vv~~hG~~~~~~~~~---~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvG~S 74 (228)
T PF12697_consen 1 VVFLHGFGGSSESWD---PLAEALA-R-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI-KKVILVGHS 74 (228)
T ss_dssp EEEE-STTTTGGGGH---HHHHHHH-T-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT-SSEEEEEET
T ss_pred eEEECCCCCCHHHHH---HHHHHHh-C-CCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc-ccccccccc
Confidence 799999999999999 8888884 3 8999999999999998754 46899999999999999999 899999999
Q ss_pred cchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccc
Q 018952 143 MGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVA 222 (348)
Q Consensus 143 ~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (348)
+||.+++.++.++|++|+++|++++......... ......+..... .........+...
T Consensus 75 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~-------------- 133 (228)
T PF12697_consen 75 MGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPS--RSFGPSFIRRLL-----AWRSRSLRRLASR-------------- 133 (228)
T ss_dssp HHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHC--HHHHHHHHHHHH-----HHHHHHHHHHHHH--------------
T ss_pred cccccccccccccccccccceeeccccccccccc--ccccchhhhhhh-----hcccccccccccc--------------
Confidence 9999999999999999999999998753100000 000000000000 0000000000000
Q ss_pred cCcccchhhhhcchHHHHHHHhhhhhhhhhhhhH--HHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCCh
Q 018952 223 RRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHE--SLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPV 300 (348)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~ 300 (348)
........+........... .. ..... .... ++...++++++|+++++|++|.+++.
T Consensus 134 ---~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~--------------~~~~~~~~~~~pvl~i~g~~D~~~~~ 192 (228)
T PF12697_consen 134 ---FFYRWFDGDEPEDLIRSSRR---AL-AEYLRSNLWQA--------------DLSEALPRIKVPVLVIHGEDDPIVPP 192 (228)
T ss_dssp ---HHHHHHTHHHHHHHHHHHHH---HH-HHHHHHHHHHH--------------HHHHHHHGSSSEEEEEEETTSSSSHH
T ss_pred ---cccccccccccccccccccc---cc-ccccccccccc--------------cccccccccCCCeEEeecCCCCCCCH
Confidence 00000000000010000000 00 00000 0000 11122334456699999999999999
Q ss_pred HHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHH
Q 018952 301 ILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAI 335 (348)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~ 335 (348)
+..+.+.+.++++++++++++||+++.| |+++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 193 ESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 9999999999999999999999999998 9988764
No 40
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=4e-28 Score=195.61 Aligned_cols=245 Identities=23% Similarity=0.289 Sum_probs=151.7
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC---ccchhhhHHH-HHHHHHHhCCCCeEEE
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP---KRTRKSLALD-IEELADQLGLGSKFYV 138 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~d-i~~~l~~l~~~~~~~l 138 (348)
+|+||++||++++...|. .+.+.|. + ||+|+++|+||+|.|+.+. ..++++.+++ +..+++.++. +++++
T Consensus 1 ~~~vv~~hG~~~~~~~~~---~~~~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 74 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQ---ALIELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGI-EPFFL 74 (251)
T ss_pred CCEEEEEcCCCCchhhHH---HHHHHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCC-CeEEE
Confidence 378999999999999999 8888887 3 7999999999999998644 3578888998 7888888887 89999
Q ss_pred EEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhh-hchhhhhhhhhccCCCC
Q 018952 139 VGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAH-YAPWLAYWWNTQKLFPP 217 (348)
Q Consensus 139 vG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 217 (348)
+|||+||.+++.+|.++|++|++++++++.... ........ .......+...... ....+...+.....+..
T Consensus 75 ~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (251)
T TIGR03695 75 VGYSMGGRIALYYALQYPERVQGLILESGSPGL-----ATEEERAA--RRQNDEQLAQRFEQEGLEAFLDDWYQQPLFAS 147 (251)
T ss_pred EEeccHHHHHHHHHHhCchheeeeEEecCCCCc-----CchHhhhh--hhhcchhhhhHHHhcCccHHHHHHhcCceeee
Confidence 999999999999999999999999999976431 11100000 00000000000000 00000000000000000
Q ss_pred CcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCC
Q 018952 218 SAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRL 297 (348)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~ 297 (348)
........ ...+...... .........+. ..... ........+.++++|+++++|++|..
T Consensus 148 -------~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~P~l~i~g~~D~~ 207 (251)
T TIGR03695 148 -------QKNLPPEQ---RQALRAKRLA---NNPEGLAKMLR-ATGLG------KQPSLWPKLQALTIPVLYLCGEKDEK 207 (251)
T ss_pred -------cccCChHH---hHHHHHhccc---ccchHHHHHHH-Hhhhh------cccchHHHhhCCCCceEEEeeCcchH
Confidence 00000000 0000000000 00000000000 00000 00012223556788899999999987
Q ss_pred CChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhc
Q 018952 298 VPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLL 341 (348)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 341 (348)
++ +..+.+.+..++++++++|++||+++.| |+++.+.|.+|++
T Consensus 208 ~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 208 FV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 74 5677788888999999999999999998 9999999999984
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=3.6e-28 Score=207.19 Aligned_cols=252 Identities=19% Similarity=0.278 Sum_probs=159.7
Q ss_pred CCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCC-CccchhhhHHHHH
Q 018952 46 DGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPD-PKRTRKSLALDIE 124 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~di~ 124 (348)
++.+++|...|++ ++++|||+||++++...|. .+...|.+. |+|+++|+||||.|... ...+++++++++.
T Consensus 117 ~~~~i~~~~~g~~---~~~~vl~~HG~~~~~~~~~---~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 188 (371)
T PRK14875 117 GGRTVRYLRLGEG---DGTPVVLIHGFGGDLNNWL---FNHAALAAG--RPVIALDLPGHGASSKAVGAGSLDELAAAVL 188 (371)
T ss_pred cCcEEEEecccCC---CCCeEEEECCCCCccchHH---HHHHHHhcC--CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 6778889888763 3689999999999999999 888877664 99999999999999643 3568999999999
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchh
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPW 204 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (348)
.+++.++. ++++++|||+||.+++.+|.++|++++++|++++..... .... .....+......... .+.
T Consensus 189 ~~~~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~-------~~~ 257 (371)
T PRK14875 189 AFLDALGI-ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGP--EING-DYIDGFVAAESRREL-------KPV 257 (371)
T ss_pred HHHHhcCC-ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCc--ccch-hHHHHhhcccchhHH-------HHH
Confidence 99999998 799999999999999999999999999999998753210 0000 000000000000000 000
Q ss_pred hhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCC
Q 018952 205 LAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSE 284 (348)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 284 (348)
....+.. ..... ............. ................. .....+....+.+++
T Consensus 258 -----~~~~~~~--------~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~i~ 314 (371)
T PRK14875 258 -----LELLFAD--------PALVT---RQMVEDLLKYKRL---DGVDDALRALADALFAG----GRQRVDLRDRLASLA 314 (371)
T ss_pred -----HHHHhcC--------hhhCC---HHHHHHHHHHhcc---ccHHHHHHHHHHHhccC----cccchhHHHHHhcCC
Confidence 0000000 00000 0000000000000 00000000000000000 000011222355677
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 285 GSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 285 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
||+++++|++|.++|++..+.+. +++++.+++++||+++.+ |+++++.|.+||++
T Consensus 315 ~Pvlii~g~~D~~vp~~~~~~l~---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 315 IPVLVIWGEQDRIIPAAHAQGLP---DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCEEEEEECCCCccCHHHHhhcc---CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 88999999999999988766543 468999999999999998 99999999999975
No 42
>PLN02511 hydrolase
Probab=99.96 E-value=3.7e-28 Score=205.41 Aligned_cols=275 Identities=15% Similarity=0.168 Sum_probs=161.2
Q ss_pred CcccceeecCCCeEEEEeeccC---CccCCCceEEEEcCCCCCchh-hhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCC
Q 018952 36 AITAPRIKLRDGRHLAYKEHGV---SKELAKYKIIFVHGFGSSRHD-AAIAANLSPEVVDELGIYIVSFDRPGYGESDPD 111 (348)
Q Consensus 36 ~~~~~~~~~~~g~~l~y~~~g~---~~~~~~~~vl~~hG~~~~~~~-~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~ 111 (348)
.+++..+.+.||..+.+.+... .....+|+||++||+++++.. |.. .+...+.++ ||+|+++|+||||.|...
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~--~~~~~~~~~-g~~vv~~d~rG~G~s~~~ 146 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVR--HMLLRARSK-GWRVVVFNSRGCADSPVT 146 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHH--HHHHHHHHC-CCEEEEEecCCCCCCCCC
Confidence 4566788899999888766531 112357899999999876543 430 445555554 999999999999999753
Q ss_pred C-ccchhhhHHHHHHHHHHhCC---CCeEEEEEeccchHHHHHHHHHhhcc--cceeEEecccccccCCCCCccchhhhh
Q 018952 112 P-KRTRKSLALDIEELADQLGL---GSKFYVVGFSMGGQVVWSCLKYISHR--LTGAALIAPVINYWWPGFPANLTKEAY 185 (348)
Q Consensus 112 ~-~~~~~~~~~di~~~l~~l~~---~~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~~il~~~~~~~~~~~~~~~~~~~~~ 185 (348)
. ......+++|+.+++++++. +.+++++||||||.+++.++.++|++ |++++++++..+. ......+
T Consensus 147 ~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l-------~~~~~~~ 219 (388)
T PLN02511 147 TPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL-------VIADEDF 219 (388)
T ss_pred CcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH-------HHHHHHH
Confidence 2 23446778899888888854 25899999999999999999999987 8888888765321 0001111
Q ss_pred hcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchh---hhhcchHHHHHHHhhhhhhhhhhhhHHHHHHh
Q 018952 186 YLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSA---QDVQLMPKLAVRQINRAQVIQQGVHESLFRDM 262 (348)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (348)
..... ................. ....+.. ....+.. .....+..+.. .... ..........+..
T Consensus 220 ~~~~~-~~y~~~~~~~l~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~fd~-~~t~-~~~gf~~~~~yy~-- 286 (388)
T PLN02511 220 HKGFN-NVYDKALAKALRKIFAK--HALLFEG------LGGEYNIPLVANAKTVRDFDD-GLTR-VSFGFKSVDAYYS-- 286 (388)
T ss_pred hccHH-HHHHHHHHHHHHHHHHH--HHHHHhh------CCCccCHHHHHhCCCHHHHHH-hhhh-hcCCCCCHHHHHH--
Confidence 11000 00000000000000000 0000000 0000000 00000111100 0000 0000000001100
Q ss_pred hhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHH-HHHHhhCCCceEEEeCCCCcceeeC-cch------HHH
Q 018952 263 MIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQ-RYISKKLPWIRYHEIPGSGHLIADA-DGM------TEA 334 (348)
Q Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e-p~~------~~~ 334 (348)
..+....+++|++|+|+|+|++|+++|.+.. ....+..+++++++++++||+.+.| |+. +.+
T Consensus 287 ----------~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~ 356 (388)
T PLN02511 287 ----------NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDP 356 (388)
T ss_pred ----------HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHH
Confidence 0123345778889999999999999998765 4567778999999999999999998 765 588
Q ss_pred HHHHHhccc
Q 018952 335 IIKALLLGE 343 (348)
Q Consensus 335 ~i~~fl~~~ 343 (348)
.+.+||+..
T Consensus 357 ~i~~Fl~~~ 365 (388)
T PLN02511 357 VVMEFLEAL 365 (388)
T ss_pred HHHHHHHHH
Confidence 999998654
No 43
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=1.9e-27 Score=230.84 Aligned_cols=259 Identities=17% Similarity=0.215 Sum_probs=159.6
Q ss_pred EEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC---------ccchhhhH
Q 018952 50 LAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP---------KRTRKSLA 120 (348)
Q Consensus 50 l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---------~~~~~~~~ 120 (348)
++|...|.. +.+++|||+||++++...|. +++..|.+. |+|+++|+||||.|.... .+++++++
T Consensus 1360 i~~~~~G~~--~~~~~vVllHG~~~s~~~w~---~~~~~L~~~--~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a 1432 (1655)
T PLN02980 1360 IKVHEVGQN--AEGSVVLFLHGFLGTGEDWI---PIMKAISGS--ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVA 1432 (1655)
T ss_pred EEEEecCCC--CCCCeEEEECCCCCCHHHHH---HHHHHHhCC--CEEEEEcCCCCCCCCCccccccccccccCCHHHHH
Confidence 444555542 24689999999999999999 888888764 999999999999997532 35789999
Q ss_pred HHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHH-h
Q 018952 121 LDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRV-A 199 (348)
Q Consensus 121 ~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 199 (348)
+++.+++++++. ++++++||||||.+++.++.++|++|+++|++++.... ..... ........ ....... .
T Consensus 1433 ~~l~~ll~~l~~-~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~-----~~~~~-~~~~~~~~-~~~~~~l~~ 1504 (1655)
T PLN02980 1433 DLLYKLIEHITP-GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGL-----KDEVA-RKIRSAKD-DSRARMLID 1504 (1655)
T ss_pred HHHHHHHHHhCC-CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCcc-----CchHH-HHHHhhhh-hHHHHHHHh
Confidence 999999999998 89999999999999999999999999999999875321 11100 00000000 0000000 0
Q ss_pred hhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCC
Q 018952 200 HYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENP 279 (348)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 279 (348)
.....+ ...++....... .. ............... ..... ........... ...++...
T Consensus 1505 ~g~~~~-----~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~--~~~~~-~~~~l~~~~~~------~~~dl~~~ 1563 (1655)
T PLN02980 1505 HGLEIF-----LENWYSGELWKS-----LR--NHPHFNKIVASRLLH--KDVPS-LAKLLSDLSIG------RQPSLWED 1563 (1655)
T ss_pred hhHHHH-----HHHhccHHHhhh-----hc--cCHHHHHHHHHHHhc--CCHHH-HHHHHHHhhhc------ccchHHHH
Confidence 000000 011111000000 00 000000000000000 00000 00000000000 00122234
Q ss_pred CCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCC------------ceEEEeCCCCcceeeC-cchHHHHHHHHhccccc
Q 018952 280 FPNSEGSVHLWQGDEDRLVPVILQRYISKKLPW------------IRYHEIPGSGHLIADA-DGMTEAIIKALLLGEKV 345 (348)
Q Consensus 280 ~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~~ 345 (348)
++++++|+|+|+|++|..++ +.++++.+.+++ ++++++|++||+++.| |+.+++.|.+||++.++
T Consensus 1564 L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1564 LKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred HhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccc
Confidence 67778889999999999875 666777777765 4899999999999998 99999999999987653
No 44
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=3.2e-27 Score=213.38 Aligned_cols=276 Identities=14% Similarity=0.134 Sum_probs=161.0
Q ss_pred ceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC---ccch
Q 018952 40 PRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP---KRTR 116 (348)
Q Consensus 40 ~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~ 116 (348)
..+...+|.+++|..+|+++ +|+|||+||++++...|. ++++.|.+ +|+|+++|+||||.|+.+. .++.
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~---~~~ivllHG~~~~~~~w~---~~~~~L~~--~~~Vi~~D~~G~G~S~~~~~~~~~~~ 76 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPD---RPTVVLVHGYPDNHEVWD---GVAPLLAD--RFRVVAYDVRGAGRSSAPKRTAAYTL 76 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCC---CCeEEEEcCCCchHHHHH---HHHHHhhc--ceEEEEecCCCCCCCCCCCcccccCH
Confidence 33445689999999998643 689999999999999999 88888843 6999999999999998543 4689
Q ss_pred hhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHH--hhcccceeEEecccccccCCCCCccchhhhhhccc---ch
Q 018952 117 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQL---PQ 191 (348)
Q Consensus 117 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 191 (348)
+++++|+..++++++.+++++++||||||.+++.++.+ .++++..++.+++... ... ........ ..
T Consensus 77 ~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~ 148 (582)
T PRK05855 77 ARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSL-------DHV-GFWLRSGLRRPTP 148 (582)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCch-------HHH-HHHHhhcccccch
Confidence 99999999999999874459999999999999888876 2445555555443210 000 00000000 00
Q ss_pred hHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchh----hhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCC
Q 018952 192 DQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSA----QDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFG 267 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (348)
....................................... ............... . .. ......+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~---- 221 (582)
T PRK05855 149 RRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTL-S-DG-AHGVKLYRANMI---- 221 (582)
T ss_pred hhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhh-c-cc-cchHHHHHhhhh----
Confidence 000000000000000000000000000000000000000 000000000000000 0 00 000000000000
Q ss_pred ccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcccc
Q 018952 268 TWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEK 344 (348)
Q Consensus 268 ~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~ 344 (348)
.......+..+++|+++|+|++|.++|++..+.+.+.+++.++++++ +||+++.| |+++.+.|.+|+++..
T Consensus 222 -----~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 222 -----RSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred -----hhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 00112234557888999999999999999999999888888888886 69999998 9999999999998643
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=6.2e-27 Score=194.18 Aligned_cols=265 Identities=15% Similarity=0.164 Sum_probs=156.2
Q ss_pred eecCCCeEEEEeeccCCccCCCceEEEEcCCCCCch-hhh----------------------hhhcccHHHHhhcCcEEE
Q 018952 42 IKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRH-DAA----------------------IAANLSPEVVDELGIYIV 98 (348)
Q Consensus 42 ~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~-~~~----------------------~~~~~~~~l~~~~g~~vi 98 (348)
+...||.+|+++.+.+. +++.+|+++||++.+.. .+. +...+++.|.+. ||+|+
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~-G~~V~ 78 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN-GYSVY 78 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC-CCcEE
Confidence 34568999999888553 45789999999998875 110 000245666665 99999
Q ss_pred EEcCCCCCCCCCC---Cc--cchhhhHHHHHHHHHHhCC-----------------------CCeEEEEEeccchHHHHH
Q 018952 99 SFDRPGYGESDPD---PK--RTRKSLALDIEELADQLGL-----------------------GSKFYVVGFSMGGQVVWS 150 (348)
Q Consensus 99 ~~D~~G~G~S~~~---~~--~~~~~~~~di~~~l~~l~~-----------------------~~~~~lvG~S~Gg~ia~~ 150 (348)
++|+||||.|... .. .+++++++|+..+++.+.. +.+++++||||||.+++.
T Consensus 79 ~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 79 GLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred EecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 9999999999853 22 3789999999999886521 358999999999999999
Q ss_pred HHHHhhc--------ccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccc
Q 018952 151 CLKYISH--------RLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVA 222 (348)
Q Consensus 151 ~a~~~p~--------~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (348)
++.++++ .++++|+++|.........+......... ...........+.+. ...
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~-----~~l~~~~~~~~p~~~--------~~~----- 220 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFY-----LPVMNFMSRVFPTFR--------ISK----- 220 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhH-----HHHHHHHHHHCCccc--------ccC-----
Confidence 9876542 58999999986431100000000000000 000000011111000 000
Q ss_pred cCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCC--CCcEEEEEeCCCCCCCh
Q 018952 223 RRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNS--EGSVHLWQGDEDRLVPV 300 (348)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~Pvl~i~G~~D~~~~~ 300 (348)
...+ ..++...+.+..++..............+..... .+...++++ ++|+|+++|++|.++++
T Consensus 221 --~~~~-~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~-----------~~~~~~~~i~~~~P~Lii~G~~D~vv~~ 286 (332)
T TIGR01607 221 --KIRY-EKSPYVNDIIKFDKFRYDGGITFNLASELIKATD-----------TLDCDIDYIPKDIPILFIHSKGDCVCSY 286 (332)
T ss_pred --cccc-ccChhhhhHHhcCccccCCcccHHHHHHHHHHHH-----------HHHhhHhhCCCCCCEEEEEeCCCCccCH
Confidence 0000 0111111111111111110111111111111110 011112222 56799999999999999
Q ss_pred HHHHHHHhhC--CCceEEEeCCCCcceeeC--cchHHHHHHHHhc
Q 018952 301 ILQRYISKKL--PWIRYHEIPGSGHLIADA--DGMTEAIIKALLL 341 (348)
Q Consensus 301 ~~~~~~~~~~--~~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~ 341 (348)
+.++.+.+.. ++++++++++++|.++.| ++++.+.+.+||+
T Consensus 287 ~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 287 EGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 9999988776 568999999999999997 5889999999985
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=4.9e-26 Score=190.66 Aligned_cols=285 Identities=16% Similarity=0.140 Sum_probs=162.9
Q ss_pred CCeEEEEeeccCCccCCCceEEEEcCCCCCchh-------------hhhhhcccHH--HHhhcCcEEEEEcCCCCCCCCC
Q 018952 46 DGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHD-------------AAIAANLSPE--VVDELGIYIVSFDRPGYGESDP 110 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~-------------~~~~~~~~~~--l~~~~g~~vi~~D~~G~G~S~~ 110 (348)
...+++|..+|..+....+.||++|++++++.. |. .++-. ..+...|.||++|..|-|.|..
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~---~~iG~g~~lDt~~yfvi~~n~lG~~~~~~ 115 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWD---GLIGPGKAIDTNKYFVISTDTLCNVQVKD 115 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHH---hccCCCCCcCCCceEEEEecccCCCcCCC
Confidence 357889999998776667899999999986532 44 33221 1222249999999998764211
Q ss_pred ----------------------CCccchhhhHHHHHHHHHHhCCCCeEE-EEEeccchHHHHHHHHHhhcccceeEEecc
Q 018952 111 ----------------------DPKRTRKSLALDIEELADQLGLGSKFY-VVGFSMGGQVVWSCLKYISHRLTGAALIAP 167 (348)
Q Consensus 111 ----------------------~~~~~~~~~~~di~~~l~~l~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~ 167 (348)
.+.++++++++++..+++++++ ++++ ++||||||++++.+|.++|++|+++|++++
T Consensus 116 p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi-~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 116 PNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGI-ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred CCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 1235899999999999999999 7886 999999999999999999999999999987
Q ss_pred cccccCCCCCcc-c-hhhhhhccc-ch-------------hHHHHHHhh---hchhhhhhhhhccCCCCCcccccCcccc
Q 018952 168 VINYWWPGFPAN-L-TKEAYYLQL-PQ-------------DQWALRVAH---YAPWLAYWWNTQKLFPPSAVVARRPEIF 228 (348)
Q Consensus 168 ~~~~~~~~~~~~-~-~~~~~~~~~-~~-------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (348)
..... +.. . ......... .. ......... ..-.....++..++.... .....+. .
T Consensus 195 ~~~~~----~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~-~~~~~~~-~ 268 (389)
T PRK06765 195 NPQND----AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNA-SIEVDPY-E 268 (389)
T ss_pred CCCCC----hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCc-ccccccc-c
Confidence 64311 000 0 000000000 00 000000000 000000001111111000 0000000 0
Q ss_pred hhhhhcchHHHHHHHhh-hhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHH
Q 018952 229 SAQDVQLMPKLAVRQIN-RAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYIS 307 (348)
Q Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~ 307 (348)
........+.+...... .........+..+.+.... +. ......++...+.++++|+|+|+|++|.++|++..+++.
T Consensus 269 ~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~-~d-~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la 346 (389)
T PRK06765 269 KVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQL-FD-AGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMV 346 (389)
T ss_pred cccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHh-cC-CccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHH
Confidence 00000001111110000 0000111111111111110 00 000001234456678888999999999999999999999
Q ss_pred hhCC----CceEEEeCC-CCcceeeC-cchHHHHHHHHhcc
Q 018952 308 KKLP----WIRYHEIPG-SGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 308 ~~~~----~~~~~~~~~-~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
+.++ +++++++++ +||+.+.| |+++++.|.+||++
T Consensus 347 ~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 347 DILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9886 689999985 89999998 99999999999976
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=3.8e-26 Score=178.76 Aligned_cols=260 Identities=18% Similarity=0.146 Sum_probs=167.0
Q ss_pred eEEEEeec-cCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHH
Q 018952 48 RHLAYKEH-GVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEEL 126 (348)
Q Consensus 48 ~~l~y~~~-g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~ 126 (348)
.++.|..+ -..+....|+++++||+.++...|. .+...|.++.+-.|+++|.|.||.|.....++..++++|+..+
T Consensus 36 ~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw~---sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~F 112 (315)
T KOG2382|consen 36 VRLAYDSVYSSENLERAPPAIILHGLLGSKENWR---SVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLF 112 (315)
T ss_pred cccceeeeecccccCCCCceEEecccccCCCCHH---HHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHH
Confidence 33444443 2222245799999999999999999 9999999988889999999999999988888999999999999
Q ss_pred HHHhC---CCCeEEEEEeccch-HHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHH-------H
Q 018952 127 ADQLG---LGSKFYVVGFSMGG-QVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQW-------A 195 (348)
Q Consensus 127 l~~l~---~~~~~~lvG~S~Gg-~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 195 (348)
++..+ ...+++++|||||| .+++..+..+|+.+..+|+++-.+.. .+.........+......+.. .
T Consensus 113 i~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~--~~~~~~e~~e~i~~m~~~d~~~~~~~~rk 190 (315)
T KOG2382|consen 113 IDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGG--VGRSYGEYRELIKAMIQLDLSIGVSRGRK 190 (315)
T ss_pred HHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCcc--CCcccchHHHHHHHHHhccccccccccHH
Confidence 99985 23799999999999 77788888999999999999865421 111111111111111111100 0
Q ss_pred HHHhh----hchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhh--cCCcc
Q 018952 196 LRVAH----YAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMI--GFGTW 269 (348)
Q Consensus 196 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 269 (348)
..... ..+.....+....+-. ... ............+..-+.. ....|
T Consensus 191 e~~~~l~~~~~d~~~~~fi~~nl~~------------~~~--------------~~s~~w~~nl~~i~~~~~~~~~~s~~ 244 (315)
T KOG2382|consen 191 EALKSLIEVGFDNLVRQFILTNLKK------------SPS--------------DGSFLWRVNLDSIASLLDEYEILSYW 244 (315)
T ss_pred HHHHHHHHHhcchHHHHHHHHhcCc------------CCC--------------CCceEEEeCHHHHHHHHHHHHhhccc
Confidence 00000 0000000111100000 000 0000000001111111100 11111
Q ss_pred ccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcccc
Q 018952 270 EFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEK 344 (348)
Q Consensus 270 ~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~ 344 (348)
. ++.. .....||+++.|.++..++.+.-.++.+.+|+++++.++++||++|.| |+++.+.|.+|++..+
T Consensus 245 -~---~l~~--~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 245 -A---DLED--GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred -c---cccc--cccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 0 1111 334456999999999999999999999999999999999999999999 9999999999998654
No 48
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.95 E-value=2.8e-26 Score=167.59 Aligned_cols=221 Identities=19% Similarity=0.235 Sum_probs=150.2
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCC-CCccchhhhHHHHHHHHHHh---CCCCeEEE
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDP-DPKRTRKSLALDIEELADQL---GLGSKFYV 138 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~-~~~~~~~~~~~di~~~l~~l---~~~~~~~l 138 (348)
+..||++||+.|+....+ .+.+.|.++ ||.|.+|.+||||.... --..++++|-+|+.+..++| +. +.+.+
T Consensus 15 ~~AVLllHGFTGt~~Dvr---~Lgr~L~e~-GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy-~eI~v 89 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVR---MLGRYLNEN-GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGY-DEIAV 89 (243)
T ss_pred CEEEEEEeccCCCcHHHH---HHHHHHHHC-CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCC-CeEEE
Confidence 368999999999999998 777777776 99999999999998863 22458888888888887777 45 79999
Q ss_pred EEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCC
Q 018952 139 VGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPS 218 (348)
Q Consensus 139 vG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (348)
+|.||||.+++.+|..+| ++++|.++++......... .......+
T Consensus 90 ~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~i--------------------ie~~l~y~------------- 134 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRII--------------------IEGLLEYF------------- 134 (243)
T ss_pred EeecchhHHHHHHHhhCC--ccceeeecCCcccccchhh--------------------hHHHHHHH-------------
Confidence 999999999999999998 8999999987542110000 00000000
Q ss_pred cccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCC
Q 018952 219 AVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLV 298 (348)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~ 298 (348)
.+...+...+.+..+......... .......+..+.+ .+...+..|..|++++.|.+|+++
T Consensus 135 ----~~~kk~e~k~~e~~~~e~~~~~~~-~~~~~~~~~~~i~--------------~~~~~~~~I~~pt~vvq~~~D~mv 195 (243)
T COG1647 135 ----RNAKKYEGKDQEQIDKEMKSYKDT-PMTTTAQLKKLIK--------------DARRSLDKIYSPTLVVQGRQDEMV 195 (243)
T ss_pred ----HHhhhccCCCHHHHHHHHHHhhcc-hHHHHHHHHHHHH--------------HHHhhhhhcccchhheecccCCCC
Confidence 000011111111111111111000 0000011111111 233345566667999999999999
Q ss_pred ChHHHHHHHhhC--CCceEEEeCCCCcceeeC--cchHHHHHHHHhcc
Q 018952 299 PVILQRYISKKL--PWIRYHEIPGSGHLIADA--DGMTEAIIKALLLG 342 (348)
Q Consensus 299 ~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~~ 342 (348)
|.+.+..+.+.. ...++.+++++||.+-.+ .+++.+.+..||++
T Consensus 196 ~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 196 PAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 999999999887 346899999999999885 89999999999974
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.94 E-value=8.3e-25 Score=185.71 Aligned_cols=240 Identities=13% Similarity=0.071 Sum_probs=150.0
Q ss_pred CcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCc-hhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-c
Q 018952 36 AITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSR-HDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-K 113 (348)
Q Consensus 36 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~-~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~ 113 (348)
++++..+...+|.++..+.+.+...++.|+||++||+++.. ..|. .+...+.++ ||+|+++|+||+|.|.... .
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~---~~~~~La~~-Gy~vl~~D~pG~G~s~~~~~~ 242 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYR---LFRDYLAPR-GIAMLTIDMPSVGFSSKWKLT 242 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHH---HHHHHHHhC-CCEEEEECCCCCCCCCCCCcc
Confidence 45666777778867776665444334567777777777653 5676 666667665 9999999999999997532 2
Q ss_pred cchhhhHHHHHHHHHHh---CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccc
Q 018952 114 RTRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLP 190 (348)
Q Consensus 114 ~~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (348)
.+.....+++.+.+... +. +++.++|||+||.+++.+|..+|++++++|++++....... . ...+..
T Consensus 243 ~d~~~~~~avld~l~~~~~vd~-~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~---~---~~~~~~--- 312 (414)
T PRK05077 243 QDSSLLHQAVLNALPNVPWVDH-TRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT---D---PKRQQQ--- 312 (414)
T ss_pred ccHHHHHHHHHHHHHhCcccCc-ccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhc---c---hhhhhh---
Confidence 23334445555555544 34 78999999999999999999999999999999986431000 0 000000
Q ss_pred hhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccc
Q 018952 191 QDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWE 270 (348)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (348)
.+.......... +. ....+.+.+ .... ..+.
T Consensus 313 -----------~p~~~~~~la~~-lg-----------~~~~~~~~l----------------------~~~l----~~~s 343 (414)
T PRK05077 313 -----------VPEMYLDVLASR-LG-----------MHDASDEAL----------------------RVEL----NRYS 343 (414)
T ss_pred -----------chHHHHHHHHHH-hC-----------CCCCChHHH----------------------HHHh----hhcc
Confidence 000000000000 00 000000000 0000 0000
Q ss_pred cCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhccc
Q 018952 271 FDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 343 (348)
Q Consensus 271 ~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 343 (348)
.....+. ..++++|+|+|+|++|.++|++.++.+++..++.+++++|++ ++.+ ++++.+.+.+||++.
T Consensus 344 l~~~~~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 344 LKVQGLL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred chhhhhh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 0000000 145677799999999999999999999999999999999986 3445 899999999999753
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=9e-25 Score=181.44 Aligned_cols=273 Identities=12% Similarity=0.067 Sum_probs=149.1
Q ss_pred ccceeecCCCeEEEEeeccCC-ccCCCceEEEEcCCCCCchh--hhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCC-Cc
Q 018952 38 TAPRIKLRDGRHLAYKEHGVS-KELAKYKIIFVHGFGSSRHD--AAIAANLSPEVVDELGIYIVSFDRPGYGESDPD-PK 113 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~-~~~~~~~vl~~hG~~~~~~~--~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~ 113 (348)
+...+.++||..+.+.+...+ ....+|+||++||++++... +. .++..+.+ .||+|+++|+||||.+... ..
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~---~~~~~l~~-~G~~v~~~d~rG~g~~~~~~~~ 107 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAH---GLLEAAQK-RGWLGVVMHFRGCSGEPNRLHR 107 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHH---HHHHHHHH-CCCEEEEEeCCCCCCCccCCcc
Confidence 456688889987766544222 22357899999999876443 33 56666665 4999999999999977532 11
Q ss_pred cchhhhHHHHHHHHH----HhCCCCeEEEEEeccchHHHHHHHHHhhcc--cceeEEecccccccCCCCCccchhhhhhc
Q 018952 114 RTRKSLALDIEELAD----QLGLGSKFYVVGFSMGGQVVWSCLKYISHR--LTGAALIAPVINYWWPGFPANLTKEAYYL 187 (348)
Q Consensus 114 ~~~~~~~~di~~~l~----~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~--v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 187 (348)
.......+|+..+++ +++. .+++++||||||.+++.+++++++. ++++|++++..... .....+..
T Consensus 108 ~~~~~~~~D~~~~i~~l~~~~~~-~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~-------~~~~~~~~ 179 (324)
T PRK10985 108 IYHSGETEDARFFLRWLQREFGH-VPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLE-------ACSYRMEQ 179 (324)
T ss_pred eECCCchHHHHHHHHHHHHhCCC-CCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHH-------HHHHHHhh
Confidence 111123445444443 3455 6899999999999998888877654 89999999764310 00000000
Q ss_pred ccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCC
Q 018952 188 QLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFG 267 (348)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (348)
... ................. ....+.... ....... .....+..+.... ... .........+...
T Consensus 180 ~~~-~~~~~~l~~~l~~~~~~-~~~~~~~~~---~~~~~~~--~~~~~~~~fd~~~-~~~-~~g~~~~~~~y~~------ 244 (324)
T PRK10985 180 GFS-RVYQRYLLNLLKANAAR-KLAAYPGTL---PINLAQL--KSVRRLREFDDLI-TAR-IHGFADAIDYYRQ------ 244 (324)
T ss_pred hHH-HHHHHHHHHHHHHHHHH-HHHhccccc---cCCHHHH--hcCCcHHHHhhhh-eec-cCCCCCHHHHHHH------
Confidence 000 00000000000000000 000000000 0000000 0000000000000 000 0000000011100
Q ss_pred ccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-c-----chHHHHHHHHhc
Q 018952 268 TWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-D-----GMTEAIIKALLL 341 (348)
Q Consensus 268 ~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p-----~~~~~~i~~fl~ 341 (348)
.+....++++++|+++|+|++|++++++..+.+.+..+++++.+++++||+.+.| . ....+.+.+|++
T Consensus 245 ------~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~ 318 (324)
T PRK10985 245 ------CSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLT 318 (324)
T ss_pred ------CChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHH
Confidence 0122335677888999999999999998888887788899999999999999986 3 366777888886
Q ss_pred cc
Q 018952 342 GE 343 (348)
Q Consensus 342 ~~ 343 (348)
..
T Consensus 319 ~~ 320 (324)
T PRK10985 319 TY 320 (324)
T ss_pred Hh
Confidence 54
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=99.93 E-value=4.4e-24 Score=169.42 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=97.6
Q ss_pred ccceeecCCCeEEEEeeccCC--ccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCC-CCCCCCC-c
Q 018952 38 TAPRIKLRDGRHLAYKEHGVS--KELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGY-GESDPDP-K 113 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~--~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~-~ 113 (348)
..+-+.+.||.+|..+..-+. ...+.++||++||+++....+. .+++.|.+. ||.|+.+|+||+ |.|+..- .
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~---~~A~~La~~-G~~vLrfD~rg~~GeS~G~~~~ 85 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFA---GLAEYLSSN-GFHVIRYDSLHHVGLSSGTIDE 85 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHH---HHHHHHHHC-CCEEEEecCCCCCCCCCCcccc
Confidence 456688889999998888654 2245689999999999876676 777777765 999999999988 9997533 2
Q ss_pred cchhhhHHHHHHHHHHh---CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 114 RTRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 114 ~~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
.+.....+|+..+++.+ +. +++.|+||||||.+|+..|.. ..++++|+.+|..+
T Consensus 86 ~t~s~g~~Dl~aaid~lk~~~~-~~I~LiG~SmGgava~~~A~~--~~v~~lI~~sp~~~ 142 (307)
T PRK13604 86 FTMSIGKNSLLTVVDWLNTRGI-NNLGLIAASLSARIAYEVINE--IDLSFLITAVGVVN 142 (307)
T ss_pred CcccccHHHHHHHHHHHHhcCC-CceEEEEECHHHHHHHHHhcC--CCCCEEEEcCCccc
Confidence 34445577887777766 34 689999999999999777664 34999999998753
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.92 E-value=5.1e-23 Score=166.69 Aligned_cols=116 Identities=19% Similarity=0.267 Sum_probs=86.2
Q ss_pred CCeEEEEeeccCCccCCCceEEEEcCCCC----CchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHH
Q 018952 46 DGRHLAYKEHGVSKELAKYKIIFVHGFGS----SRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLAL 121 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~~~~~vl~~hG~~~----~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 121 (348)
+|.++.-..+-+.+ ..+++||++||++. +...|. .+.+.|.+. ||+|+++|+||||.|.... .+++++.+
T Consensus 10 ~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~~~~---~la~~l~~~-G~~v~~~Dl~G~G~S~~~~-~~~~~~~~ 83 (274)
T TIGR03100 10 EGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHRQFV---LLARRLAEA-GFPVLRFDYRGMGDSEGEN-LGFEGIDA 83 (274)
T ss_pred CCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchhHHH---HHHHHHHHC-CCEEEEeCCCCCCCCCCCC-CCHHHHHH
Confidence 56666544443332 23567888887663 233344 566677665 9999999999999997542 46778888
Q ss_pred HHHHHHHHh-----CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 122 DIEELADQL-----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 122 di~~~l~~l-----~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
|+.++++.+ +. ++++++|||+||.+++.+|.. +++|+++|+++|..
T Consensus 84 d~~~~~~~l~~~~~g~-~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 84 DIAAAIDAFREAAPHL-RRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred HHHHHHHHHHhhCCCC-CcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 888888877 44 679999999999999999765 56899999999863
No 53
>PLN02872 triacylglycerol lipase
Probab=99.91 E-value=3.4e-23 Score=173.56 Aligned_cols=135 Identities=21% Similarity=0.250 Sum_probs=101.5
Q ss_pred CCCCcccceeecCCCeEEEEeeccCCc----cCCCceEEEEcCCCCCchhhhhh---hcccHHHHhhcCcEEEEEcCCCC
Q 018952 33 GGPAITAPRIKLRDGRHLAYKEHGVSK----ELAKYKIIFVHGFGSSRHDAAIA---ANLSPEVVDELGIYIVSFDRPGY 105 (348)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~y~~~g~~~----~~~~~~vl~~hG~~~~~~~~~~~---~~~~~~l~~~~g~~vi~~D~~G~ 105 (348)
.+-+.|++++.+.||..+......++. ...+|+|+++||+++++..|... +.+...|+ ++||+|+++|+||+
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La-~~GydV~l~n~RG~ 118 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILA-DHGFDVWVGNVRGT 118 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHH-hCCCCccccccccc
Confidence 456789999999999999988874321 12468999999999999888410 01222344 45999999999998
Q ss_pred CCCCC-------CC---ccchhhhH-HHHHHHHHHh---CCCCeEEEEEeccchHHHHHHHHHhhc---ccceeEEeccc
Q 018952 106 GESDP-------DP---KRTRKSLA-LDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPV 168 (348)
Q Consensus 106 G~S~~-------~~---~~~~~~~~-~di~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~~il~~~~ 168 (348)
+.|.. +. ++++++++ .|+.++++++ .. ++++++|||+||.+++.++ .+|+ +|+.+++++|.
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPI 196 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcch
Confidence 76532 11 34778888 7999999987 33 7999999999999998555 5675 68999999987
Q ss_pred cc
Q 018952 169 IN 170 (348)
Q Consensus 169 ~~ 170 (348)
..
T Consensus 197 ~~ 198 (395)
T PLN02872 197 SY 198 (395)
T ss_pred hh
Confidence 54
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=2.2e-24 Score=171.63 Aligned_cols=218 Identities=24% Similarity=0.342 Sum_probs=127.7
Q ss_pred cEEEEEcCCCCCCCCC-----CCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 95 IYIVSFDRPGYGESDP-----DPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 95 ~~vi~~D~~G~G~S~~-----~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
|+|+++|+||+|.|++ ...++.+++++++..++++++. ++++++||||||.+++.+|+.+|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI-KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT-SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC-CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999995 2346899999999999999999 789999999999999999999999999999999851
Q ss_pred cccCCCCCccchhhhhhc-ccch---hHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhh-hhcchHHHHHHHh
Q 018952 170 NYWWPGFPANLTKEAYYL-QLPQ---DQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQ-DVQLMPKLAVRQI 244 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 244 (348)
. .........+.. .... ..................... ....... ..+..........
T Consensus 80 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 142 (230)
T PF00561_consen 80 D-----LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQ------------FFAYDREFVEDFLKQFQSQQY 142 (230)
T ss_dssp H-----HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHTHHHHHHHHHH
T ss_pred c-----chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhh------------eeeccCccccchhhccchhhh
Confidence 0 000000000000 0000 000000000000000000000 0000000 0000000000000
Q ss_pred hhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcc
Q 018952 245 NRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHL 324 (348)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 324 (348)
.. .. .................. .+....+.++++|+++++|++|.++|++....+.+.+|+.++++++++||+
T Consensus 143 ~~-~~-~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~ 215 (230)
T PF00561_consen 143 AR-FA-ETDAFDNMFWNALGYFSV-----WDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHF 215 (230)
T ss_dssp HH-TC-HHHHHHHHHHHHHHHHHH-----HHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCST
T ss_pred hH-HH-HHHHHhhhcccccccccc-----ccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChH
Confidence 00 00 000000000000000000 012233455778899999999999999999999999999999999999999
Q ss_pred eeeC-cchHHHHHH
Q 018952 325 IADA-DGMTEAIIK 337 (348)
Q Consensus 325 ~~~e-p~~~~~~i~ 337 (348)
.+.+ |+++++.|.
T Consensus 216 ~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 216 AFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHSHHHHHHHHH
T ss_pred HHhcCHHhhhhhhc
Confidence 9997 999999875
No 55
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.91 E-value=1.4e-22 Score=147.37 Aligned_cols=227 Identities=19% Similarity=0.219 Sum_probs=159.4
Q ss_pred CCCCcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC
Q 018952 33 GGPAITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP 112 (348)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~ 112 (348)
.+.+.++..+.+.|..++.-++.-+ +.++|+++++||..++....- +.+.-+-...+.+|+.+++||+|.|...+
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~--E~S~pTlLyfh~NAGNmGhr~---~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp 124 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLS--ESSRPTLLYFHANAGNMGHRL---PIARVFYVNLKMNVLIVSYRGYGKSEGSP 124 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeecc--cCCCceEEEEccCCCcccchh---hHHHHHHHHcCceEEEEEeeccccCCCCc
Confidence 3456778888999999997766643 347899999999999887776 67777777778899999999999998755
Q ss_pred ccchhhhHHHHHHHHHHhCC-----CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhc
Q 018952 113 KRTRKSLALDIEELADQLGL-----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYL 187 (348)
Q Consensus 113 ~~~~~~~~~di~~~l~~l~~-----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 187 (348)
+-+.+.-|-+.+++++-. ..+++++|.|+||.+|..+|++..+++.++|+-+..... |...
T Consensus 125 --sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI-----p~~~------- 190 (300)
T KOG4391|consen 125 --SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI-----PHMA------- 190 (300)
T ss_pred --cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccc-----hhhh-------
Confidence 444555566666766621 268999999999999999999999999999999986431 0000
Q ss_pred ccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCC
Q 018952 188 QLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFG 267 (348)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (348)
.. -.++ .....+..+ .+.+.+.
T Consensus 191 ----------i~-------------~v~p--------------~~~k~i~~l--------------c~kn~~~------- 212 (300)
T KOG4391|consen 191 ----------IP-------------LVFP--------------FPMKYIPLL--------------CYKNKWL------- 212 (300)
T ss_pred ----------hh-------------eecc--------------chhhHHHHH--------------HHHhhhc-------
Confidence 00 0000 000000000 0000000
Q ss_pred ccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCC--ceEEEeCCCCcceeeCcchHHHHHHHHhcccc
Q 018952 268 TWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPW--IRYHEIPGSGHLIADADGMTEAIIKALLLGEK 344 (348)
Q Consensus 268 ~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~ep~~~~~~i~~fl~~~~ 344 (348)
-...+..-+.|.|+|.|..|.++||.+.+.+.+.+|. .++..+|++.|.--.--+-..++|.+||.+..
T Consensus 213 --------S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 213 --------SYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVV 283 (300)
T ss_pred --------chhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhc
Confidence 0001112334599999999999999999999999964 68999999999876655667888899987654
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.90 E-value=1.5e-22 Score=153.80 Aligned_cols=185 Identities=18% Similarity=0.170 Sum_probs=122.7
Q ss_pred ceEEEEcCCCCCchhhhhhhcc-cHHHHhh--cCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEE
Q 018952 64 YKIIFVHGFGSSRHDAAIAANL-SPEVVDE--LGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVG 140 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~-~~~l~~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG 140 (348)
|+||++||++++...|. .. ...+..+ .+|+|+++|+||+| ++.++++.+++++++. ++++++|
T Consensus 2 p~illlHGf~ss~~~~~---~~~~~~~l~~~~~~~~v~~~dl~g~~----------~~~~~~l~~l~~~~~~-~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAK---ATLLKNWLAQHHPDIEMIVPQLPPYP----------ADAAELLESLVLEHGG-DPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHH---HHHHHHHHHHhCCCCeEEeCCCCCCH----------HHHHHHHHHHHHHcCC-CCeEEEE
Confidence 58999999999999997 42 3333332 26999999999984 4688899999999998 7999999
Q ss_pred eccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcc
Q 018952 141 FSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAV 220 (348)
Q Consensus 141 ~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (348)
|||||.+++.+|.++|. ++|+++|.... ......+.. ..
T Consensus 68 ~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~-------~~~~~~~~~------------------------~~------- 106 (190)
T PRK11071 68 SSLGGYYATWLSQCFML---PAVVVNPAVRP-------FELLTDYLG------------------------EN------- 106 (190)
T ss_pred ECHHHHHHHHHHHHcCC---CEEEECCCCCH-------HHHHHHhcC------------------------Cc-------
Confidence 99999999999999983 46888885320 000000000 00
Q ss_pred cccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCCh
Q 018952 221 VARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPV 300 (348)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~ 300 (348)
...........-..+. .+... . ++.. +. ..+|+++++|++|.++|+
T Consensus 107 ----~~~~~~~~~~~~~~~~-------------------~d~~~------~---~~~~-i~-~~~~v~iihg~~De~V~~ 152 (190)
T PRK11071 107 ----ENPYTGQQYVLESRHI-------------------YDLKV------M---QIDP-LE-SPDLIWLLQQTGDEVLDY 152 (190)
T ss_pred ----ccccCCCcEEEcHHHH-------------------HHHHh------c---CCcc-CC-ChhhEEEEEeCCCCcCCH
Confidence 0000000000000110 00000 0 1111 22 445599999999999999
Q ss_pred HHHHHHHhhCCCceEEEeCCCCcceeeCcchHHHHHHHHhc
Q 018952 301 ILQRYISKKLPWIRYHEIPGSGHLIADADGMTEAIIKALLL 341 (348)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 341 (348)
+.+.++++. ++.+.++|++|.+.. .+++.+.+.+|++
T Consensus 153 ~~a~~~~~~---~~~~~~~ggdH~f~~-~~~~~~~i~~fl~ 189 (190)
T PRK11071 153 RQAVAYYAA---CRQTVEEGGNHAFVG-FERYFNQIVDFLG 189 (190)
T ss_pred HHHHHHHHh---cceEEECCCCcchhh-HHHhHHHHHHHhc
Confidence 999999884 467788999999832 4778888888875
No 57
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.90 E-value=2.3e-22 Score=173.03 Aligned_cols=260 Identities=12% Similarity=0.085 Sum_probs=143.5
Q ss_pred CCceEEEEcCCCCCchhhhhh--hcccHHHHhhcCcEEEEEcCCCCCCCCCCC---ccchhhhHHHHHHHHHHhCCCCeE
Q 018952 62 AKYKIIFVHGFGSSRHDAAIA--ANLSPEVVDELGIYIVSFDRPGYGESDPDP---KRTRKSLALDIEELADQLGLGSKF 136 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~--~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~di~~~l~~l~~~~~~ 136 (348)
.++|||++||+......|+.. ..++..|.++ ||+|+++|++|+|.|.... +|..+.+.+++..+++.++. +++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~-~kv 264 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQ-GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGE-KQV 264 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHC-CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCC-CCe
Confidence 578999999999888887411 1356666665 9999999999999886532 23445566667788878888 899
Q ss_pred EEEEeccchHHHH----HHHHHh-hcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhh
Q 018952 137 YVVGFSMGGQVVW----SCLKYI-SHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNT 211 (348)
Q Consensus 137 ~lvG~S~Gg~ia~----~~a~~~-p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (348)
+++|||+||.++. .+++.+ +++|++++++++..++..++.-............ ........+++...-....
T Consensus 265 ~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~---e~~~~~~G~lpg~~m~~~F 341 (532)
T TIGR01838 265 NCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGI---ERQNGGGGYLDGRQMAVTF 341 (532)
T ss_pred EEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHH---HHHHHhcCCCCHHHHHHHH
Confidence 9999999999862 345555 7899999999998775432211110000000000 0000000000000000000
Q ss_pred ccCCCCCcccc-cCcccchhhhhcc--hHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEE
Q 018952 212 QKLFPPSAVVA-RRPEIFSAQDVQL--MPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVH 288 (348)
Q Consensus 212 ~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl 288 (348)
....+...... .....+....... +..+..+...............+..+.....+.+ ........+.+|++|++
T Consensus 342 ~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~--~v~g~~~dL~~I~vPvL 419 (532)
T TIGR01838 342 SLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGL--EVCGVRLDLSKVKVPVY 419 (532)
T ss_pred HhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCee--EECCEecchhhCCCCEE
Confidence 00000000000 0000000000000 0000000000111111122222222222111222 22234556788999999
Q ss_pred EEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC
Q 018952 289 LWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA 328 (348)
Q Consensus 289 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 328 (348)
+|+|++|.++|++.+..+.+.+++.+..+++++||..+.+
T Consensus 420 vV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 420 IIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVV 459 (532)
T ss_pred EEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhh
Confidence 9999999999999999999999999999999999999986
No 58
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.90 E-value=3.5e-22 Score=150.95 Aligned_cols=216 Identities=18% Similarity=0.221 Sum_probs=152.4
Q ss_pred CcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccc
Q 018952 36 AITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRT 115 (348)
Q Consensus 36 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~ 115 (348)
..+-..+.+..|..+.-..+-+ +....+++++.||...+..... .++..+....+++++.+|++|+|.|.+.+.
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~-~~~~~~~lly~hGNa~Dlgq~~---~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps-- 107 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRP-PEAAHPTLLYSHGNAADLGQMV---ELFKELSIFLNCNVVSYDYSGYGRSSGKPS-- 107 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcC-ccccceEEEEcCCcccchHHHH---HHHHHHhhcccceEEEEecccccccCCCcc--
Confidence 3444556666676665444433 3234689999999977666555 667777776679999999999999987553
Q ss_pred hhhhHHHHHHHHHHh----CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccch
Q 018952 116 RKSLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQ 191 (348)
Q Consensus 116 ~~~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (348)
-....+|+.++-+.| |..++++|+|+|+|+..++.+|.+.| ++++|+.+|.....+
T Consensus 108 E~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r------------------ 167 (258)
T KOG1552|consen 108 ERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR------------------ 167 (258)
T ss_pred cccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhh------------------
Confidence 224455555555544 32389999999999999999999988 999999999643100
Q ss_pred hHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCcccc
Q 018952 192 DQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEF 271 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (348)
-.++. .... +.+
T Consensus 168 ---------------------v~~~~-------------~~~~----------------------------------~~~ 179 (258)
T KOG1552|consen 168 ---------------------VAFPD-------------TKTT----------------------------------YCF 179 (258)
T ss_pred ---------------------hhccC-------------cceE----------------------------------Eee
Confidence 00000 0000 000
Q ss_pred CCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCc-eEEEeCCCCcceeeCcchHHHHHHHHhccccc
Q 018952 272 DPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWI-RYHEIPGSGHLIADADGMTEAIIKALLLGEKV 345 (348)
Q Consensus 272 ~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ep~~~~~~i~~fl~~~~~ 345 (348)
+....-..++.++||+|++||++|.+++....+++.+..++. +-.++.|+||.-..-..++.+.+..|+....+
T Consensus 180 d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 180 DAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred ccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHhcc
Confidence 000112346778888999999999999999999999999775 77888899999876566788888888876543
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.89 E-value=3.7e-22 Score=167.79 Aligned_cols=266 Identities=12% Similarity=0.062 Sum_probs=141.6
Q ss_pred CCceEEEEcCCCCCchhh-----hhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHH-H----HHHHHHhC
Q 018952 62 AKYKIIFVHGFGSSRHDA-----AIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALD-I----EELADQLG 131 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~-----~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~d-i----~~~l~~l~ 131 (348)
.+++||++||+..+...+ . .+++.|.+. ||+|+++|++|+|.|+.. .++++++.+ + ..+.+..+
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~---~~~~~L~~~-G~~V~~~D~~g~g~s~~~--~~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDR---SLVRGLLER-GQDVYLIDWGYPDRADRY--LTLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCCcEEEeccccccceeccCCCCc---hHHHHHHHC-CCeEEEEeCCCCCHHHhc--CCHHHHHHHHHHHHHHHHHHHhC
Confidence 456899999987655554 4 566777665 999999999999987643 355555433 4 44445556
Q ss_pred CCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhh
Q 018952 132 LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNT 211 (348)
Q Consensus 132 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (348)
. ++++++||||||.+++.+++.+|++|+++|++++...+......... +...... ..........+........
T Consensus 135 ~-~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~p~~~~~~~f 208 (350)
T TIGR01836 135 L-DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSN----WARHVDI-DLAVDTMGNIPGELLNLTF 208 (350)
T ss_pred C-CcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhh----hccccCH-HHHHHhcCCCCHHHHHHHH
Confidence 6 79999999999999999999999999999999987654321110000 0000000 0000000001100000000
Q ss_pred ccCCCCCcccc-cCcccchhhhhcchHHHHHHHh--hhhhhhhhhhhHHHHHHh----hhcCCccccCCCCcCCCCCCCC
Q 018952 212 QKLFPPSAVVA-RRPEIFSAQDVQLMPKLAVRQI--NRAQVIQQGVHESLFRDM----MIGFGTWEFDPMDLENPFPNSE 284 (348)
Q Consensus 212 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~~~ 284 (348)
....+...... .........+.+....+..... ..........+..+.+.. ......+. .......+.+++
T Consensus 209 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~--~~~~~~~l~~i~ 286 (350)
T TIGR01836 209 LMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVE--IGGRKVDLKNIK 286 (350)
T ss_pred HhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeE--ECCEEccHHhCC
Confidence 00000000000 0000000001111111110000 000000000111111111 00001110 011223466788
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHhhCCC--ceEEEeCCCCcceee-C---cchHHHHHHHHhcc
Q 018952 285 GSVHLWQGDEDRLVPVILQRYISKKLPW--IRYHEIPGSGHLIAD-A---DGMTEAIIKALLLG 342 (348)
Q Consensus 285 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-e---p~~~~~~i~~fl~~ 342 (348)
+|+++++|++|.++|++.++.+.+.+++ .++++++ +||.... + ++++.+.|.+|+.+
T Consensus 287 ~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 287 MPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 8899999999999999999999998864 5677777 6887766 3 47888899999865
No 60
>PRK10566 esterase; Provisional
Probab=99.88 E-value=3e-21 Score=155.25 Aligned_cols=101 Identities=22% Similarity=0.271 Sum_probs=72.3
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-ccch-------hhhHHHHHHHHHHh---
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-KRTR-------KSLALDIEELADQL--- 130 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~-------~~~~~di~~~l~~l--- 130 (348)
+.|+||++||++++...|. .+...|.+. ||+|+++|+||||.+.... .... .+..+|+.++++.+
T Consensus 26 ~~p~vv~~HG~~~~~~~~~---~~~~~l~~~-G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYS---YFAVALAQA-GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREE 101 (249)
T ss_pred CCCEEEEeCCCCcccchHH---HHHHHHHhC-CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 4689999999999988888 777777765 9999999999999864221 1111 12234444444443
Q ss_pred C-C-CCeEEEEEeccchHHHHHHHHHhhcccceeEEec
Q 018952 131 G-L-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIA 166 (348)
Q Consensus 131 ~-~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~ 166 (348)
+ + .++++++|||+||.+++.++.++|+....+++++
T Consensus 102 ~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 102 GWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred CCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 1 2 2689999999999999999998886444444444
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.86 E-value=4e-21 Score=141.23 Aligned_cols=144 Identities=28% Similarity=0.490 Sum_probs=109.7
Q ss_pred eEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccc
Q 018952 65 KIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMG 144 (348)
Q Consensus 65 ~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~G 144 (348)
+||++||++++...|. .+.+.+.+. ||.|+.+|+|++|.+.... ..+++.+++. .+..+. ++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~---~~~~~l~~~-G~~v~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~-~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQ---PLAEALAEQ-GYAVVAFDYPGHGDSDGAD--AVERVLADIR--AGYPDP-DRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHH---HHHHHHHHT-TEEEEEESCTTSTTSHHSH--HHHHHHHHHH--HHHCTC-CEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHH---HHHHHHHHC-CCEEEEEecCCCCccchhH--HHHHHHHHHH--hhcCCC-CcEEEEEEccC
Confidence 5899999999999999 888988887 9999999999999883211 2222222222 112355 89999999999
Q ss_pred hHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccC
Q 018952 145 GQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARR 224 (348)
Q Consensus 145 g~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (348)
|.+++.++.+. .+++++|++++... .
T Consensus 72 g~~a~~~~~~~-~~v~~~v~~~~~~~--------~--------------------------------------------- 97 (145)
T PF12695_consen 72 GAIAANLAARN-PRVKAVVLLSPYPD--------S--------------------------------------------- 97 (145)
T ss_dssp HHHHHHHHHHS-TTESEEEEESESSG--------C---------------------------------------------
T ss_pred cHHHHHHhhhc-cceeEEEEecCccc--------h---------------------------------------------
Confidence 99999999987 78999999997210 0
Q ss_pred cccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHH
Q 018952 225 PEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQR 304 (348)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~ 304 (348)
..+...+.|+++++|++|..+|.+..+
T Consensus 98 -----------------------------------------------------~~~~~~~~pv~~i~g~~D~~~~~~~~~ 124 (145)
T PF12695_consen 98 -----------------------------------------------------EDLAKIRIPVLFIHGENDPLVPPEQVR 124 (145)
T ss_dssp -----------------------------------------------------HHHTTTTSEEEEEEETT-SSSHHHHHH
T ss_pred -----------------------------------------------------hhhhccCCcEEEEEECCCCcCCHHHHH
Confidence 001122234999999999999999999
Q ss_pred HHHhhCC-CceEEEeCCCCcc
Q 018952 305 YISKKLP-WIRYHEIPGSGHL 324 (348)
Q Consensus 305 ~~~~~~~-~~~~~~~~~~gH~ 324 (348)
++.+.++ +.++.+++|++|+
T Consensus 125 ~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 125 RLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHcCCCcEEEEeCCCcCc
Confidence 9988886 5899999999996
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=9.7e-20 Score=148.35 Aligned_cols=267 Identities=23% Similarity=0.207 Sum_probs=152.5
Q ss_pred CCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhc-CcEEEEEcCCCCCCCCCCCccchhhhHHHHH
Q 018952 46 DGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDEL-GIYIVSFDRPGYGESDPDPKRTRKSLALDIE 124 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~ 124 (348)
.+..+.|...+.. +++++++||++++...|. .....+.... .|+++++|+||||.|. ...++....++++.
T Consensus 8 ~~~~~~~~~~~~~----~~~i~~~hg~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~~~~~~~~~~~~~ 79 (282)
T COG0596 8 DGVRLAYREAGGG----GPPLVLLHGFPGSSSVWR---PVFKVLPALAARYRVIAPDLRGHGRSD-PAGYSLSAYADDLA 79 (282)
T ss_pred CCeEEEEeecCCC----CCeEEEeCCCCCchhhhH---HHHHHhhccccceEEEEecccCCCCCC-cccccHHHHHHHHH
Confidence 5666777777654 459999999999999998 5333333321 1899999999999997 11234555599999
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhc--
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYA-- 202 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 202 (348)
.++++++. .+++++|||+||.+++.++.++|+++++++++++............. ....... ..........
T Consensus 80 ~~~~~~~~-~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~ 153 (282)
T COG0596 80 ALLDALGL-EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQ--PAGAAPL---AALADLLLGLDA 153 (282)
T ss_pred HHHHHhCC-CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCcccc--Cccccch---hhhhhhhhccch
Confidence 99999998 67999999999999999999999999999999976431000000000 0000000 0000000000
Q ss_pred hhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCC-CcCCCCC
Q 018952 203 PWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPM-DLENPFP 281 (348)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~ 281 (348)
...........+.... ........................ ............ ..... .......
T Consensus 154 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~~~~~~~ 218 (282)
T COG0596 154 AAFAALLAALGLLAAL--AAAARAGLAEALRAPLLGAAAAAF---ARAARADLAAAL----------LALLDRDLRAALA 218 (282)
T ss_pred hhhhhhhhcccccccc--cccchhccccccccccchhHhhhh---hhhcccccchhh----------hcccccccchhhc
Confidence 0000000000000000 000000000000000000000000 000000000000 00000 2334566
Q ss_pred CCCCcEEEEEeCCCCCCChHHHHHHHhhCCC-ceEEEeCCCCcceeeC-cchHHHHHHHHhc
Q 018952 282 NSEGSVHLWQGDEDRLVPVILQRYISKKLPW-IRYHEIPGSGHLIADA-DGMTEAIIKALLL 341 (348)
Q Consensus 282 ~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 341 (348)
++++|+++++|++|.+.|......+.+..++ .++.+++++||+++.+ |+.+.+.+.+|++
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 7788899999999977777667778788885 8999999999999998 9999998888554
No 63
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.86 E-value=2.5e-21 Score=146.51 Aligned_cols=114 Identities=22% Similarity=0.288 Sum_probs=94.1
Q ss_pred EEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC--ccchhhhHHHHHHHH
Q 018952 50 LAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLALDIEELA 127 (348)
Q Consensus 50 l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~di~~~l 127 (348)
+..+..+++ .+.+|.++++||.|.+...|. .+..++..+...+|+++|+||||.+...+ +.+.+.++.|+.+++
T Consensus 62 ~n~Y~t~~~-~t~gpil~l~HG~G~S~LSfA---~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i 137 (343)
T KOG2564|consen 62 FNVYLTLPS-ATEGPILLLLHGGGSSALSFA---IFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVI 137 (343)
T ss_pred EEEEEecCC-CCCccEEEEeecCcccchhHH---HHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHH
Confidence 444444443 356899999999999999999 99999998877889999999999997543 458999999999999
Q ss_pred HHhC--CCCeEEEEEeccchHHHHHHHHH--hhcccceeEEeccc
Q 018952 128 DQLG--LGSKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPV 168 (348)
Q Consensus 128 ~~l~--~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~~il~~~~ 168 (348)
+.+- ...+++||||||||.||.+.|.. -|. +.|+++++-+
T Consensus 138 ~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 138 KELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 9883 23789999999999999888764 355 8999998854
No 64
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.86 E-value=7e-20 Score=172.97 Aligned_cols=260 Identities=15% Similarity=0.119 Sum_probs=145.0
Q ss_pred CCceEEEEcCCCCCchhhhhhhcc-----cHHHHhhcCcEEEEEcCCCCCCCCCCCc---cchhhhHHHHHHHHHH---h
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANL-----SPEVVDELGIYIVSFDRPGYGESDPDPK---RTRKSLALDIEELADQ---L 130 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~-----~~~l~~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~di~~~l~~---l 130 (348)
.++||||+||++.+...|+ .. ++.|.+. ||+|+++|+ |.++.+.. .++.+++..+.+.++. +
T Consensus 66 ~~~plllvhg~~~~~~~~d---~~~~~s~v~~L~~~-g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~ 138 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWD---VTRDDGAVGILHRA-GLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDV 138 (994)
T ss_pred CCCcEEEECCCCCCcccee---cCCcccHHHHHHHC-CCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHh
Confidence 5689999999999999998 55 5666665 899999994 66665432 3556666555555554 3
Q ss_pred CCCCeEEEEEeccchHHHHHHHHHh-hcccceeEEecccccccCC---CCCccchhh-------hhhcccchhHHHHHHh
Q 018952 131 GLGSKFYVVGFSMGGQVVWSCLKYI-SHRLTGAALIAPVINYWWP---GFPANLTKE-------AYYLQLPQDQWALRVA 199 (348)
Q Consensus 131 ~~~~~~~lvG~S~Gg~ia~~~a~~~-p~~v~~~il~~~~~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~~~ 199 (348)
.. ++++++||||||.+++.+++.+ +++|+++|++++..++... ..+...... ..........+.....
T Consensus 139 ~~-~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 217 (994)
T PRK07868 139 TG-RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTG 217 (994)
T ss_pred hC-CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHH
Confidence 34 6899999999999999998755 5689999999987654321 111000000 0000000000000000
Q ss_pred --hhchh--hhhh-hhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhh----cCCccc
Q 018952 200 --HYAPW--LAYW-WNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMI----GFGTWE 270 (348)
Q Consensus 200 --~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 270 (348)
...+. .... ...+.+.. +... .+.+....+....... .........+.+.... ....+
T Consensus 218 ~~~l~p~~~~~~~~~~~~~l~~--------~~~~--~~~e~~~~~~~~~~w~--~~~g~~~~~~~~~~~~~n~~~~g~~- 284 (994)
T PRK07868 218 FQMLDPVKTAKARVDFLRQLHD--------REAL--LPREQQRRFLESEGWI--AWSGPAISELLKQFIAHNRMMTGGF- 284 (994)
T ss_pred HHhcChhHHHHHHHHHHHhcCc--------hhhh--ccchhhHhHHHHhhcc--ccchHHHHHHHHHHHHhCcccCceE-
Confidence 00000 0000 00000000 0000 0000011111100000 0000011111111111 00101
Q ss_pred cCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCceE-EEeCCCCcceee---C-cchHHHHHHHHhccc
Q 018952 271 FDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIRY-HEIPGSGHLIAD---A-DGMTEAIIKALLLGE 343 (348)
Q Consensus 271 ~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---e-p~~~~~~i~~fl~~~ 343 (348)
....-...+.++++|+|+|+|++|.++|++..+.+.+.++++++ .+++++||+.+. . ++++...|.+||++.
T Consensus 285 -~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 285 -AINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred -EECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 00111234778888899999999999999999999999999987 678999999876 3 888999999999754
No 65
>PRK11460 putative hydrolase; Provisional
Probab=99.84 E-value=1.8e-19 Score=141.76 Aligned_cols=172 Identities=15% Similarity=0.161 Sum_probs=115.4
Q ss_pred cCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC------------cc---chhhhHHHHH
Q 018952 60 ELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP------------KR---TRKSLALDIE 124 (348)
Q Consensus 60 ~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~------------~~---~~~~~~~di~ 124 (348)
...++.||++||++++...|. .+.+.+.+. ++.+..++.+|...+.... .. ...+..+.+.
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~---~l~~~l~~~-~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMG---EIGSWFAPA-FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHH---HHHHHHHHH-CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHH
Confidence 345789999999999999999 888888765 4445555556543221110 01 1122222233
Q ss_pred HHH----HHhCC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHh
Q 018952 125 ELA----DQLGL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVA 199 (348)
Q Consensus 125 ~~l----~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (348)
+++ +..++ .++++++|||+||.+++.++.++|+.+.+++.+++....
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~---------------------------- 140 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS---------------------------- 140 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc----------------------------
Confidence 333 33344 258999999999999999999999888888777652100
Q ss_pred hhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCC
Q 018952 200 HYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENP 279 (348)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 279 (348)
.+ .
T Consensus 141 ---------------~~----------------------------------------------------------~---- 143 (232)
T PRK11460 141 ---------------LP----------------------------------------------------------E---- 143 (232)
T ss_pred ---------------cc----------------------------------------------------------c----
Confidence 00 0
Q ss_pred CCCCCCcEEEEEeCCCCCCChHHHHHHHhhCC----CceEEEeCCCCcceeeC-cchHHHHHHHHh
Q 018952 280 FPNSEGSVHLWQGDEDRLVPVILQRYISKKLP----WIRYHEIPGSGHLIADA-DGMTEAIIKALL 340 (348)
Q Consensus 280 ~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl 340 (348)
.+..+.|++++||++|.++|.+.++++.+.+. ++++++++++||.+..+ -+...+.+.+++
T Consensus 144 ~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 144 TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 00112349999999999999999988887763 46888999999998764 555555555555
No 66
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.84 E-value=3.3e-19 Score=139.61 Aligned_cols=277 Identities=16% Similarity=0.113 Sum_probs=149.0
Q ss_pred cccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchh-hhhhhcccHHHHhhcCcEEEEEcCCCCCCCCC-CCcc
Q 018952 37 ITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHD-AAIAANLSPEVVDELGIYIVSFDRPGYGESDP-DPKR 114 (348)
Q Consensus 37 ~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~-~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~-~~~~ 114 (348)
.....+.++||..+-..+..++....+|.||++||+.|++.. +. ..+...+.+ +||.|+++++|||+.+.. .+..
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~--r~L~~~~~~-rg~~~Vv~~~Rgcs~~~n~~p~~ 125 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYA--RGLMRALSR-RGWLVVVFHFRGCSGEANTSPRL 125 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHH--HHHHHHHHh-cCCeEEEEecccccCCcccCcce
Confidence 356688888988777766666665667899999999876544 33 134444444 499999999999998864 2222
Q ss_pred chhhhHHHHHHHHHHh---CCCCeEEEEEeccchHHHHHHHHHhhc--ccceeEEecccccccCCCCCccchhhhhhccc
Q 018952 115 TRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPVINYWWPGFPANLTKEAYYLQL 189 (348)
Q Consensus 115 ~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (348)
.-.-+.+|+..+++++ ..+.++..+|.|+||.+...+..+..+ .+.+.+.++.+.+.. .....+
T Consensus 126 yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~-----------~~~~~l 194 (345)
T COG0429 126 YHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLE-----------ACAYRL 194 (345)
T ss_pred ecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHH-----------HHHHHh
Confidence 2233447777777766 334899999999999555455444332 456666666543210 000000
Q ss_pred chhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhh-hhhhhHHHHHHhhhcCCc
Q 018952 190 PQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVI-QQGVHESLFRDMMIGFGT 268 (348)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 268 (348)
....+........-..+......+.-. .....+... ....+..+.+.+.. ...+ ..-.+......+..
T Consensus 195 ~~~~s~~ly~r~l~~~L~~~~~~kl~~---l~~~~p~~~-~~~ik~~~ti~eFD---~~~Tap~~Gf~da~dYYr~---- 263 (345)
T COG0429 195 DSGFSLRLYSRYLLRNLKRNAARKLKE---LEPSLPGTV-LAAIKRCRTIREFD---DLLTAPLHGFADAEDYYRQ---- 263 (345)
T ss_pred cCchhhhhhHHHHHHHHHHHHHHHHHh---cCcccCcHH-HHHHHhhchHHhcc---ceeeecccCCCcHHHHHHh----
Confidence 000000000000000000000000000 000000000 00000011111100 0000 00001111111111
Q ss_pred cccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHh-hCCCceEEEeCCCCcceeeC-----cc-hHHHHHHHHhc
Q 018952 269 WEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISK-KLPWIRYHEIPGSGHLIADA-----DG-MTEAIIKALLL 341 (348)
Q Consensus 269 ~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~e-----p~-~~~~~i~~fl~ 341 (348)
.+-..-+++|++|+|+|++.+|++++++...+... ..|++.+..-+.+||..+.. |. ...+.+.+|++
T Consensus 264 -----aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~ 338 (345)
T COG0429 264 -----ASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338 (345)
T ss_pred -----ccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHH
Confidence 12223478899999999999999999988877776 66889999999999988874 22 55677788876
Q ss_pred cc
Q 018952 342 GE 343 (348)
Q Consensus 342 ~~ 343 (348)
..
T Consensus 339 ~~ 340 (345)
T COG0429 339 PF 340 (345)
T ss_pred HH
Confidence 54
No 67
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.84 E-value=2.6e-19 Score=130.37 Aligned_cols=222 Identities=16% Similarity=0.163 Sum_probs=139.0
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCcc-chhhhHHHHHHHHHHhCCCC--eEEE
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKR-TRKSLALDIEELADQLGLGS--KFYV 138 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~di~~~l~~l~~~~--~~~l 138 (348)
+...+|++||+-++...-.+ ..++...++.|+.++.+|++|.|.|...-.+ .....++|+..+++++.--. --++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~--~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIM--KNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred CceEEEEeeccccccchHHH--HHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEE
Confidence 36799999999987544221 3334444445999999999999999875544 45566799999999985312 2478
Q ss_pred EEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCC
Q 018952 139 VGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPS 218 (348)
Q Consensus 139 vG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (348)
+|||-||-+++.+|.++++ +.-+|.+++-.+.. ...-.+..+....+...+.++...
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~----------------------~~I~eRlg~~~l~~ike~Gfid~~ 166 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLK----------------------NGINERLGEDYLERIKEQGFIDVG 166 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchh----------------------cchhhhhcccHHHHHHhCCceecC
Confidence 9999999999999999987 67777766543210 000011222222222333333211
Q ss_pred cccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCC
Q 018952 219 AVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLV 298 (348)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~ 298 (348)
......+....+ ......+..+.... .++ =..+||||-+||..|.++
T Consensus 167 ~rkG~y~~rvt~---------------------eSlmdrLntd~h~a---------clk---Id~~C~VLTvhGs~D~IV 213 (269)
T KOG4667|consen 167 PRKGKYGYRVTE---------------------ESLMDRLNTDIHEA---------CLK---IDKQCRVLTVHGSEDEIV 213 (269)
T ss_pred cccCCcCceecH---------------------HHHHHHHhchhhhh---------hcC---cCccCceEEEeccCCcee
Confidence 111111111100 00000111111000 111 114567999999999999
Q ss_pred ChHHHHHHHhhCCCceEEEeCCCCcceeeCcchHHHHHHHHhc
Q 018952 299 PVILQRYISKKLPWIRYHEIPGSGHLIADADGMTEAIIKALLL 341 (348)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 341 (348)
|.+.++++++.+|+-++.++||+.|.......+.......|.+
T Consensus 214 Pve~AkefAk~i~nH~L~iIEgADHnyt~~q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 214 PVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQLVSLGLEFIK 256 (269)
T ss_pred echhHHHHHHhccCCceEEecCCCcCccchhhhHhhhcceeEE
Confidence 9999999999999999999999999987755566666666654
No 68
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.8e-18 Score=137.96 Aligned_cols=287 Identities=19% Similarity=0.164 Sum_probs=162.5
Q ss_pred CCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhc-------ccHHHHh------hcCcEEEEEcCCCCC-CCCCC
Q 018952 46 DGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAAN-------LSPEVVD------ELGIYIVSFDRPGYG-ESDPD 111 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~-------~~~~l~~------~~g~~vi~~D~~G~G-~S~~~ 111 (348)
++.++.|..+|.......+.||++||+.++..... . +.+.+.- ...|-||+.|..|.+ .|..|
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~---~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP 110 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAG---TADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGP 110 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccc---cCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCC
Confidence 46789999999887666789999999998654433 1 2233322 124899999999865 33322
Q ss_pred --------------CccchhhhHHHHHHHHHHhCCCCeEE-EEEeccchHHHHHHHHHhhcccceeEEecccccccCCCC
Q 018952 112 --------------PKRTRKSLALDIEELADQLGLGSKFY-VVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGF 176 (348)
Q Consensus 112 --------------~~~~~~~~~~di~~~l~~l~~~~~~~-lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~ 176 (348)
+..++.|++..-..++++||+ +++. +||.||||+.++.++..||++|.+++.+++.........
T Consensus 111 ~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI-~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~i 189 (368)
T COG2021 111 SSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGI-KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNI 189 (368)
T ss_pred CCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCc-ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHH
Confidence 124778999888999999999 6765 999999999999999999999999999998654210000
Q ss_pred Cccchhh-------h-----hhcccchhHHHHHHhhhchhhhh---hhhhccCCCCCcccccCcccchhhhhcchHHHHH
Q 018952 177 PANLTKE-------A-----YYLQLPQDQWALRVAHYAPWLAY---WWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAV 241 (348)
Q Consensus 177 ~~~~~~~-------~-----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (348)
....... . |... .........++....+.. ..+.+++-.... .......-.....+.+-....
T Consensus 190 a~~~~~r~AI~~DP~~n~G~Y~~~-~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~-~~~~~~~~~~f~vESYL~~qg 267 (368)
T COG2021 190 AFNEVQRQAIEADPDWNGGDYYEG-TQPERGLRLARMLAHLTYRSEEELDERFGRRLQ-ADPLRGGGVRFAVESYLDYQG 267 (368)
T ss_pred HHHHHHHHHHHhCCCccCCCccCC-CCcchhHHHHHHHHHHHccCHHHHHHHhccccc-ccccCCCchhHHHHHHHHHHH
Confidence 0000000 0 0000 000011111111111111 001111111000 000000000011111111111
Q ss_pred HHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCCce-EEEeC-
Q 018952 242 RQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPWIR-YHEIP- 319 (348)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~-~~~~~- 319 (348)
.... .....+.+..+.+.+. ..+......++..-+.++++|++++.-+.|...|++..+++.+.++... +.+++
T Consensus 268 ~kf~--~rfDaNsYL~lt~ald--~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S 343 (368)
T COG2021 268 DKFV--ARFDANSYLYLTRALD--YHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDS 343 (368)
T ss_pred HHHH--hccCcchHHHHHHHHH--hcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecC
Confidence 1111 0111111111211110 0100111123444478888999999999999999999999999998766 76664
Q ss_pred CCCcceee-CcchHHHHHHHHhcc
Q 018952 320 GSGHLIAD-ADGMTEAIIKALLLG 342 (348)
Q Consensus 320 ~~gH~~~~-ep~~~~~~i~~fl~~ 342 (348)
..||.-+. |.+.+...|..||+.
T Consensus 344 ~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 344 PYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CCCchhhhcchhhhhHHHHHHhhc
Confidence 47999888 588899999999975
No 69
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.83 E-value=1.2e-18 Score=141.31 Aligned_cols=122 Identities=16% Similarity=0.221 Sum_probs=89.9
Q ss_pred CCeEEEEeeccCCc--cCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcC--CCCCCCCCC----------
Q 018952 46 DGRHLAYKEHGVSK--ELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDR--PGYGESDPD---------- 111 (348)
Q Consensus 46 ~g~~l~y~~~g~~~--~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~--~G~G~S~~~---------- 111 (348)
.+..+.|..+.|+. ..+.|+|+++||++++...|... ..+..++++.|+.|+++|. +|+|.+...
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~-~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~ 101 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIK-AGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAG 101 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhh-hHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcc
Confidence 46777888887643 23568999999999999888510 2345677767999999998 555533210
Q ss_pred -----------Cccch-hhhHHHHHHHHHH---hCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 112 -----------PKRTR-KSLALDIEELADQ---LGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 112 -----------~~~~~-~~~~~di~~~l~~---l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
..++. ...++++..+++. ++. ++++++||||||.+++.++.++|+.+++++++++..
T Consensus 102 ~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 102 FYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDG-ERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred ccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCC-CceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 01122 2346777777776 344 689999999999999999999999999999999864
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.82 E-value=2.9e-19 Score=141.57 Aligned_cols=123 Identities=15% Similarity=0.183 Sum_probs=92.9
Q ss_pred eeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCc----hhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-ccc
Q 018952 41 RIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSR----HDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-KRT 115 (348)
Q Consensus 41 ~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~----~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~ 115 (348)
++..++|....+ .+.+....++++||++||+++.. ..|. .+.+.|.+. ||+|+++|+||||.|.... ..+
T Consensus 4 ~l~~~~g~~~~~-~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~---~la~~La~~-Gy~Vl~~Dl~G~G~S~g~~~~~~ 78 (266)
T TIGR03101 4 FLDAPHGFRFCL-YHPPVAVGPRGVVIYLPPFAEEMNKSRRMVA---LQARAFAAG-GFGVLQIDLYGCGDSAGDFAAAR 78 (266)
T ss_pred EecCCCCcEEEE-EecCCCCCCceEEEEECCCcccccchhHHHH---HHHHHHHHC-CCEEEEECCCCCCCCCCccccCC
Confidence 344555664443 33333333468899999998653 3455 566777654 9999999999999997543 347
Q ss_pred hhhhHHHHHHHHHHh---CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 116 RKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 116 ~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
++++++|+..+++.+ +. ++++++||||||.+++.+|.++|++++++|+++|..
T Consensus 79 ~~~~~~Dv~~ai~~L~~~~~-~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 79 WDVWKEDVAAAYRWLIEQGH-PPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHHHHHHHHHHHHHhcCC-CCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 778888887765544 55 799999999999999999999999999999999864
No 71
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.81 E-value=4e-18 Score=132.70 Aligned_cols=264 Identities=19% Similarity=0.212 Sum_probs=143.9
Q ss_pred ceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchh-hhhhhcc-----cHHHHhhcCcEEEEEcCCCCCCCC--CC
Q 018952 40 PRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHD-AAIAANL-----SPEVVDELGIYIVSFDRPGYGESD--PD 111 (348)
Q Consensus 40 ~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~-~~~~~~~-----~~~l~~~~g~~vi~~D~~G~G~S~--~~ 111 (348)
+.+.+.-| .+++...|.++ +++|++|-.|..|.+... |. .+ ...+.+ .|-++-+|.||+..-. -+
T Consensus 2 h~v~t~~G-~v~V~v~G~~~-~~kp~ilT~HDvGlNh~scF~---~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~p 74 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPK-GNKPAILTYHDVGLNHKSCFQ---GFFNFEDMQEILQ--NFCIYHIDAPGQEEGAATLP 74 (283)
T ss_dssp EEEEETTE-EEEEEEESS---TTS-EEEEE--TT--HHHHCH---HHHCSHHHHHHHT--TSEEEEEE-TTTSTT-----
T ss_pred ceeccCce-EEEEEEEecCC-CCCceEEEeccccccchHHHH---HHhcchhHHHHhh--ceEEEEEeCCCCCCCccccc
Confidence 45667666 48889999865 368999999999987665 44 33 234444 4999999999995543 34
Q ss_pred Ccc---chhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcc
Q 018952 112 PKR---TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQ 188 (348)
Q Consensus 112 ~~~---~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 188 (348)
.++ |.+++++++.++++++++ +.++.+|--.||.|..++|.++|++|.|+||+++.... .... +.+...
T Consensus 75 ~~y~yPsmd~LAe~l~~Vl~~f~l-k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~------~gw~-Ew~~~K 146 (283)
T PF03096_consen 75 EGYQYPSMDQLAEMLPEVLDHFGL-KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA------AGWM-EWFYQK 146 (283)
T ss_dssp TT-----HHHHHCTHHHHHHHHT----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---------HH-HHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHhCCc-cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC------ccHH-HHHHHH
Confidence 443 899999999999999999 89999999999999999999999999999999986431 1100 000000
Q ss_pred cchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCc
Q 018952 189 LPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGT 268 (348)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (348)
.. .+........+....... ...|.. .......+..+.+...-. ..........+.+.+.
T Consensus 147 ~~--~~~L~~~gmt~~~~d~Ll-~h~Fg~---------~~~~~n~Dlv~~yr~~l~---~~~Np~Nl~~f~~sy~----- 206 (283)
T PF03096_consen 147 LS--SWLLYSYGMTSSVKDYLL-WHYFGK---------EEEENNSDLVQTYRQHLD---ERINPKNLALFLNSYN----- 206 (283)
T ss_dssp HH---------CTTS-HHHHHH-HHHS-H---------HHHHCT-HHHHHHHHHHH---T-TTHHHHHHHHHHHH-----
T ss_pred Hh--cccccccccccchHHhhh-hccccc---------ccccccHHHHHHHHHHHh---cCCCHHHHHHHHHHHh-----
Confidence 00 000000000010000000 011110 000001111211111100 0000011111111111
Q ss_pred cccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC--CCceEEEeCCCCcceeeC-cchHHHHHHHHhccc
Q 018952 269 WEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL--PWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 343 (348)
Q Consensus 269 ~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 343 (348)
...++....+...||+|++.|+..+.. +.+.++..++ .+.++..++++|=.+..| |..+++.++-|+.+.
T Consensus 207 ---~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 207 ---SRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp ---T-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred ---ccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 122455556677799999999888775 5667777777 357899999999999998 999999999999764
No 72
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=3.8e-18 Score=128.41 Aligned_cols=220 Identities=15% Similarity=0.101 Sum_probs=144.4
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCC-CCccchhhhHHHHHHHHHHhCCCCeEEEE
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDP-DPKRTRKSLALDIEELADQLGLGSKFYVV 139 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~-~~~~~~~~~~~di~~~l~~l~~~~~~~lv 139 (348)
..+..++++|-.|+++..|. .+...+... ..++++++||.|..-. +.-.+++++++.+...+...-.++++.++
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr---~W~~~lp~~--iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alf 79 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFR---SWSRRLPAD--IELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALF 79 (244)
T ss_pred CCCceEEEecCCCCCHHHHH---HHHhhCCch--hheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeec
Confidence 35678999999999999998 888877765 8899999999987743 44568999999998888732223799999
Q ss_pred EeccchHHHHHHHHHhhc---ccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCC
Q 018952 140 GFSMGGQVVWSCLKYISH---RLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFP 216 (348)
Q Consensus 140 G~S~Gg~ia~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (348)
||||||++|.++|.+... ...++.+.+...+. .....
T Consensus 80 GHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~-------~~~~~--------------------------------- 119 (244)
T COG3208 80 GHSMGAMLAFEVARRLERAGLPPRALFISGCRAPH-------YDRGK--------------------------------- 119 (244)
T ss_pred ccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCC-------CcccC---------------------------------
Confidence 999999999999986532 35666666654320 00000
Q ss_pred CCcccccCcccchhhhhcchHHHHHHHhh-----hhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEE
Q 018952 217 PSAVVARRPEIFSAQDVQLMPKLAVRQIN-----RAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQ 291 (348)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~ 291 (348)
......+.+.++.+..-... ........+...+..++..... + ... +-..++||+.++.
T Consensus 120 ---------~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~-Y-----~~~-~~~pl~~pi~~~~ 183 (244)
T COG3208 120 ---------QIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALES-Y-----RYP-PPAPLACPIHAFG 183 (244)
T ss_pred ---------CccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcc-c-----ccC-CCCCcCcceEEec
Confidence 00011111112211111111 0011111122222222222111 1 111 2245778899999
Q ss_pred eCCCCCCChHHHHHHHhhCC-CceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 292 GDEDRLVPVILQRYISKKLP-WIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 292 G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
|++|..++.+....+.+..+ ..++.+++| ||+...+ .+++.+.|.+.+..
T Consensus 184 G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 184 GEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred cCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhh
Confidence 99999999999999998886 579999985 9999998 88888888888853
No 73
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.80 E-value=6.2e-17 Score=131.82 Aligned_cols=262 Identities=15% Similarity=0.141 Sum_probs=144.8
Q ss_pred CCcccceeecCCCeEEEEeeccCCcc------CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCC
Q 018952 35 PAITAPRIKLRDGRHLAYKEHGVSKE------LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGES 108 (348)
Q Consensus 35 ~~~~~~~~~~~~g~~l~y~~~g~~~~------~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S 108 (348)
....+..++++||..+.+.+.-++.. ...|.||++||+.+++..-.+ .-+...+.+.||+|++++.||+|.|
T Consensus 91 ~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YV--r~lv~~a~~~G~r~VVfN~RG~~g~ 168 (409)
T KOG1838|consen 91 VEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYV--RHLVHEAQRKGYRVVVFNHRGLGGS 168 (409)
T ss_pred CcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHH--HHHHHHHHhCCcEEEEECCCCCCCC
Confidence 44678889999999999888744432 456999999998876655221 2233334445999999999999998
Q ss_pred CCCCc-cchhhhHHHHHHHHHHhCC---CCeEEEEEeccchHHHHHHHHHhhc---ccceeEEecccccccCCCCCccch
Q 018952 109 DPDPK-RTRKSLALDIEELADQLGL---GSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVINYWWPGFPANLT 181 (348)
Q Consensus 109 ~~~~~-~~~~~~~~di~~~l~~l~~---~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~ 181 (348)
.-... .-...+.+|+.++++++.. ..++..+|.||||.+.+.|..+..+ .+.++++.+|.-.. ..
T Consensus 169 ~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~--------~~ 240 (409)
T KOG1838|consen 169 KLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL--------AA 240 (409)
T ss_pred ccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh--------hh
Confidence 74332 2334556777777776632 3689999999999999999986543 34555555554210 00
Q ss_pred hhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhh-cchHHHHHHHhhhhhhhhhhhhHHHHH
Q 018952 182 KEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDV-QLMPKLAVRQINRAQVIQQGVHESLFR 260 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (348)
...+...................+... .+. ........++.... +.++.+-..-. . ..........+.+
T Consensus 241 ~~~~~~~~~~~~y~~~l~~~l~~~~~~--~r~------~~~~~~vd~d~~~~~~SvreFD~~~t-~-~~~gf~~~deYY~ 310 (409)
T KOG1838|consen 241 SRSIETPLYRRFYNRALTLNLKRIVLR--HRH------TLFEDPVDFDVILKSRSVREFDEALT-R-PMFGFKSVDEYYK 310 (409)
T ss_pred hhHHhcccchHHHHHHHHHhHHHHHhh--hhh------hhhhccchhhhhhhcCcHHHHHhhhh-h-hhcCCCcHHHHHh
Confidence 111111111111111111111100000 000 00000000000000 11111110000 0 0000001111111
Q ss_pred HhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHH-HHHHHhhCCCceEEEeCCCCcceeeC
Q 018952 261 DMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVIL-QRYISKKLPWIRYHEIPGSGHLIADA 328 (348)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e 328 (348)
.......+++|++|+|+|++.+|+++|++. -.......|++-+.+-..+||..+.|
T Consensus 311 ------------~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfle 367 (409)
T KOG1838|consen 311 ------------KASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLE 367 (409)
T ss_pred ------------hcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeec
Confidence 113445588899999999999999999854 35556666888888888899998875
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.80 E-value=8.2e-18 Score=136.59 Aligned_cols=120 Identities=18% Similarity=0.195 Sum_probs=84.7
Q ss_pred CCeEEEEeeccCCc--cCCCceEEEEcCCCCCchhhhhhhcc--cHHHHhhcCcEEEEEcCCCCCC-----CCC------
Q 018952 46 DGRHLAYKEHGVSK--ELAKYKIIFVHGFGSSRHDAAIAANL--SPEVVDELGIYIVSFDRPGYGE-----SDP------ 110 (348)
Q Consensus 46 ~g~~l~y~~~g~~~--~~~~~~vl~~hG~~~~~~~~~~~~~~--~~~l~~~~g~~vi~~D~~G~G~-----S~~------ 110 (348)
-|..+.|..+-|+. ....|+|+++||++++...|. .. +..+....|+.|+.+|..++|. +..
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~---~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~ 104 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFI---QKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVG 104 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHH---HhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCC
Confidence 46778888875542 234689999999999888775 32 2345555699999999887661 110
Q ss_pred C--------C--------ccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 111 D--------P--------KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 111 ~--------~--------~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
. . .+-.+++.+.+....+.++. ++++++||||||..++.++.++|+++++++.+++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~-~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 105 AGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDT-SRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred cceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCC-CceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 0 0 00122333344444445566 789999999999999999999999999999999864
No 75
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.79 E-value=1.2e-16 Score=122.40 Aligned_cols=274 Identities=15% Similarity=0.137 Sum_probs=166.2
Q ss_pred cccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchh-hh--hhhcccHHHHhhcCcEEEEEcCCCCCCC--CCC
Q 018952 37 ITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHD-AA--IAANLSPEVVDELGIYIVSFDRPGYGES--DPD 111 (348)
Q Consensus 37 ~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~-~~--~~~~~~~~l~~~~g~~vi~~D~~G~G~S--~~~ 111 (348)
.+++.+.+..|. +++.++|.+++ ++|.+|-.|..+.+... |. +--+-+..+.++ |-|+-+|.||+-.- .-+
T Consensus 22 ~~e~~V~T~~G~-v~V~V~Gd~~~-~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~--fcv~HV~~PGqe~gAp~~p 97 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYGDPKG-NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH--FCVYHVDAPGQEDGAPSFP 97 (326)
T ss_pred ceeeeecccccc-EEEEEecCCCC-CCceEEEecccccchHhHhHHhhcCHhHHHHHhh--eEEEecCCCccccCCccCC
Confidence 567888887776 89999998875 78889999999987655 43 000234556665 88999999998433 334
Q ss_pred Ccc---chhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcc
Q 018952 112 PKR---TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQ 188 (348)
Q Consensus 112 ~~~---~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 188 (348)
.++ |.++++++|..+++++++ +.++-+|.-.|++|..++|..||++|-|+||+++.... .......+.+.
T Consensus 98 ~~y~yPsmd~LAd~l~~VL~~f~l-k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a------~gwiew~~~K~ 170 (326)
T KOG2931|consen 98 EGYPYPSMDDLADMLPEVLDHFGL-KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA------KGWIEWAYNKV 170 (326)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCc-ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC------chHHHHHHHHH
Confidence 443 899999999999999999 89999999999999999999999999999999986431 11111111100
Q ss_pred cchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCc
Q 018952 189 LPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGT 268 (348)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (348)
....-....+...... +.....|... ......+..+.+...-.. .........+...+. .+
T Consensus 171 ~s~~l~~~Gmt~~~~d----~ll~H~Fg~e---------~~~~~~diVq~Yr~~l~~---~~N~~Nl~~fl~ayn---~R 231 (326)
T KOG2931|consen 171 SSNLLYYYGMTQGVKD----YLLAHHFGKE---------ELGNNSDIVQEYRQHLGE---RLNPKNLALFLNAYN---GR 231 (326)
T ss_pred HHHHHHhhchhhhHHH----HHHHHHhccc---------cccccHHHHHHHHHHHHh---cCChhHHHHHHHHhc---CC
Confidence 0000000001111111 1111111111 000112222222111110 001011111111111 00
Q ss_pred cccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC--CCceEEEeCCCCcceeeC-cchHHHHHHHHhccc
Q 018952 269 WEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL--PWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 343 (348)
Q Consensus 269 ~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 343 (348)
-+.. .....+...++||+|++.|++.+.+ +.+.++..++ .+.++..+.++|-.+..+ |..+.+.+.-|+.+.
T Consensus 232 ~DL~-~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 232 RDLS-IERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred CCcc-ccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 0000 0122222357799999999988775 5556666666 357899999999999997 999999999999864
No 76
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.79 E-value=8.3e-18 Score=150.68 Aligned_cols=232 Identities=15% Similarity=0.084 Sum_probs=143.8
Q ss_pred CcccceeecCCCeEEEEeeccCCccCC---CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCC---
Q 018952 36 AITAPRIKLRDGRHLAYKEHGVSKELA---KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESD--- 109 (348)
Q Consensus 36 ~~~~~~~~~~~g~~l~y~~~g~~~~~~---~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~--- 109 (348)
..+..++...||.+++++...|....+ -|.||++||.+.....|.+ ...++.++.. ||.|+.+++||.+.-.
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~-~~~~q~~~~~-G~~V~~~n~RGS~GyG~~F 441 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSF-NPEIQVLASA-GYAVLAPNYRGSTGYGREF 441 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCcccccccc-chhhHHHhcC-CeEEEEeCCCCCCccHHHH
Confidence 346677888899999999987755332 2899999999866555331 0445556654 9999999999754321
Q ss_pred C--C----CccchhhhHHHHHHHHHHhCC--CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccch
Q 018952 110 P--D----PKRTRKSLALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLT 181 (348)
Q Consensus 110 ~--~----~~~~~~~~~~di~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~ 181 (348)
. . .....+|+.+.+. +++..+. .+++.++|||+||.+++..+.+.| .+++.+...+.....
T Consensus 442 ~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~--------- 510 (620)
T COG1506 442 ADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWL--------- 510 (620)
T ss_pred HHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhh---------
Confidence 1 1 1124555555555 4445443 268999999999999999999887 778777777654310
Q ss_pred hhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHH
Q 018952 182 KEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRD 261 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (348)
......... .++. .......+.. +.+.+...
T Consensus 511 --------------~~~~~~~~~--------~~~~-~~~~~~~~~~----~~~~~~~~---------------------- 541 (620)
T COG1506 511 --------------LYFGESTEG--------LRFD-PEENGGGPPE----DREKYEDR---------------------- 541 (620)
T ss_pred --------------hhccccchh--------hcCC-HHHhCCCccc----ChHHHHhc----------------------
Confidence 000000000 0000 0000000000 00000000
Q ss_pred hhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC----CCceEEEeCCCCcceee-C-cchHHHH
Q 018952 262 MMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL----PWIRYHEIPGSGHLIAD-A-DGMTEAI 335 (348)
Q Consensus 262 ~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-e-p~~~~~~ 335 (348)
.-..-..++++|+|+|||++|..||.+.+.++.+.+ .+++++++|+.||.+.. + ...+.+.
T Consensus 542 -------------sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~ 608 (620)
T COG1506 542 -------------SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKE 608 (620)
T ss_pred -------------ChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHH
Confidence 011124556777999999999999999998888776 35799999999999887 4 5556666
Q ss_pred HHHHhcc
Q 018952 336 IKALLLG 342 (348)
Q Consensus 336 i~~fl~~ 342 (348)
+.+|+++
T Consensus 609 ~~~~~~~ 615 (620)
T COG1506 609 ILDWFKR 615 (620)
T ss_pred HHHHHHH
Confidence 6666654
No 77
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.77 E-value=1.2e-16 Score=122.73 Aligned_cols=113 Identities=23% Similarity=0.320 Sum_probs=94.6
Q ss_pred EEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc--cchhhhHHHHHHHHH
Q 018952 51 AYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK--RTRKSLALDIEELAD 128 (348)
Q Consensus 51 ~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~di~~~l~ 128 (348)
.|....+ .+++..+||-+||.+++..++. .+.+.|.+ .|.|+|.+++||+|.+..+++ ++-.+-..-+.++++
T Consensus 24 ~y~D~~~-~gs~~gTVv~~hGsPGSH~DFk---Yi~~~l~~-~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~ 98 (297)
T PF06342_consen 24 VYEDSLP-SGSPLGTVVAFHGSPGSHNDFK---YIRPPLDE-AGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLD 98 (297)
T ss_pred EEEecCC-CCCCceeEEEecCCCCCccchh---hhhhHHHH-cCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHH
Confidence 3555433 2244568999999999999998 55555555 599999999999999987654 688889999999999
Q ss_pred HhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 129 QLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 129 ~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
.++++++++.+|||.||-.|+.+|..+| +.|+++++|.+.
T Consensus 99 ~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 99 ELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred HcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 9999889999999999999999999986 679999998754
No 78
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.73 E-value=1.1e-16 Score=125.28 Aligned_cols=185 Identities=16% Similarity=0.140 Sum_probs=109.7
Q ss_pred HHHHhhcCcEEEEEcCCCCCCCCCC-----CccchhhhHHHHHHHHHHh----CC-CCeEEEEEeccchHHHHHHHHHhh
Q 018952 87 PEVVDELGIYIVSFDRPGYGESDPD-----PKRTRKSLALDIEELADQL----GL-GSKFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 87 ~~l~~~~g~~vi~~D~~G~G~S~~~-----~~~~~~~~~~di~~~l~~l----~~-~~~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
..++.++||.|+.+|+||.+..... ....-....+|+.+.++.+ .+ .+++.++|+|+||.+++.++.++|
T Consensus 7 ~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~ 86 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHP 86 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTC
T ss_pred HHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccc
Confidence 3444445999999999998754311 1112233455666666555 22 279999999999999999999999
Q ss_pred cccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcch
Q 018952 157 HRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLM 236 (348)
Q Consensus 157 ~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (348)
+++++++..+|..+... ....... ...... ... ..+. ...+.+
T Consensus 87 ~~f~a~v~~~g~~d~~~-----~~~~~~~----~~~~~~---~~~---------------------~~~~----~~~~~~ 129 (213)
T PF00326_consen 87 DRFKAAVAGAGVSDLFS-----YYGTTDI----YTKAEY---LEY---------------------GDPW----DNPEFY 129 (213)
T ss_dssp CGSSEEEEESE-SSTTC-----SBHHTCC----HHHGHH---HHH---------------------SSTT----TSHHHH
T ss_pred eeeeeeeccceecchhc-----ccccccc----cccccc---ccc---------------------Cccc----hhhhhh
Confidence 99999999998754210 0000000 000000 000 0000 000000
Q ss_pred HHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCC--CCCcEEEEEeCCCCCCChHHHHHHHhhC----
Q 018952 237 PKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPN--SEGSVHLWQGDEDRLVPVILQRYISKKL---- 310 (348)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~Pvl~i~G~~D~~~~~~~~~~~~~~~---- 310 (348)
.. .. -..++.+ +++|+|+++|++|..||++.+.++.+.+
T Consensus 130 ~~-------------------~s----------------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g 174 (213)
T PF00326_consen 130 RE-------------------LS----------------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAG 174 (213)
T ss_dssp HH-------------------HH----------------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTT
T ss_pred hh-------------------hc----------------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcC
Confidence 00 00 0011222 5556999999999999999998887766
Q ss_pred CCceEEEeCCCCcceee-C-cchHHHHHHHHhccc
Q 018952 311 PWIRYHEIPGSGHLIAD-A-DGMTEAIIKALLLGE 343 (348)
Q Consensus 311 ~~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl~~~ 343 (348)
.++++.++|++||.+.. + .....+.+.+|+++.
T Consensus 175 ~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 175 KPVELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp SSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 34899999999997665 4 567788888888754
No 79
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.73 E-value=3.1e-16 Score=122.33 Aligned_cols=107 Identities=19% Similarity=0.237 Sum_probs=75.5
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc-------cchhhhHHHHHHHHHHh----
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK-------RTRKSLALDIEELADQL---- 130 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~di~~~l~~l---- 130 (348)
..|.||++||.+++...+... .-+..++++.||.|+++|.+|++.+....+ ........++..+++.+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~-~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVID-WGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhh-cChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 478999999999887766410 124556666799999999999875432110 00112233444444433
Q ss_pred CC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 131 GL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 131 ~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
++ .++++++|||+||.+++.++.++|+.+.+++.+++..
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 33 2589999999999999999999999999999888753
No 80
>PLN00021 chlorophyllase
Probab=99.73 E-value=2.2e-16 Score=128.82 Aligned_cols=116 Identities=15% Similarity=0.113 Sum_probs=80.9
Q ss_pred EEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCcc-chhhhHHHHHHHH
Q 018952 49 HLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKR-TRKSLALDIEELA 127 (348)
Q Consensus 49 ~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~di~~~l 127 (348)
.+.+..+-+...+..|+|||+||++.+...|. .+++.+++. ||.|+++|++|++.+...... +..+..+.+.+.+
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~---~l~~~Las~-G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l 113 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNSFYS---QLLQHIASH-GFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGL 113 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcccHH---HHHHHHHhC-CCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhh
Confidence 34555554544455799999999999988898 888888765 999999999997543221111 1222222232222
Q ss_pred HH-------hCCCCeEEEEEeccchHHHHHHHHHhhc-----ccceeEEecccc
Q 018952 128 DQ-------LGLGSKFYVVGFSMGGQVVWSCLKYISH-----RLTGAALIAPVI 169 (348)
Q Consensus 128 ~~-------l~~~~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~~il~~~~~ 169 (348)
+. .+. ++++++|||+||.+++.+|.++++ +++++|+++|..
T Consensus 114 ~~~l~~~~~~d~-~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 114 AAVLPEGVRPDL-SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hhhcccccccCh-hheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 22 233 689999999999999999998874 689999999863
No 81
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.72 E-value=9.6e-16 Score=125.97 Aligned_cols=131 Identities=21% Similarity=0.242 Sum_probs=84.7
Q ss_pred CcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-cc
Q 018952 36 AITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-KR 114 (348)
Q Consensus 36 ~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~ 114 (348)
++++..|...+ .+|..+..-+..+++.|+||++.|..+-...+. .++...+..+|+.++++|.||.|.|...+ ..
T Consensus 164 ~i~~v~iP~eg-~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~---~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~ 239 (411)
T PF06500_consen 164 PIEEVEIPFEG-KTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLY---RLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQ 239 (411)
T ss_dssp EEEEEEEEETT-CEEEEEEEESSSSS-EEEEEEE--TTS-GGGGH---HHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S
T ss_pred CcEEEEEeeCC-cEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHH---HHHHHHHHhCCCEEEEEccCCCcccccCCCCc
Confidence 35666677754 556554444554456688888888888877765 55555444459999999999999986422 22
Q ss_pred chhhhHHHHHHHHHHhCC--CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 115 TRKSLALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 115 ~~~~~~~di~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
+.+.+.+.+.+.+..... ..++.++|.|+||.+|.++|..++++++++|..+++.+
T Consensus 240 D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 240 DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp -CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 334455556555555532 26999999999999999999988999999999999754
No 82
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.70 E-value=1.3e-15 Score=130.24 Aligned_cols=109 Identities=6% Similarity=0.051 Sum_probs=85.9
Q ss_pred CCCceEEEEcCCCCCchhhhhh--hcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh----CCCC
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIA--ANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL----GLGS 134 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~--~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l----~~~~ 134 (348)
..++|||+++.+-...+.++.. ..+++.+.++ ||+|+++|+++-+.+. ...+++++++.+.+.++.+ |. +
T Consensus 213 v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~q-G~~VflIsW~nP~~~~--r~~~ldDYv~~i~~Ald~V~~~tG~-~ 288 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKN-QLQVFIISWRNPDKAH--REWGLSTYVDALKEAVDAVRAITGS-R 288 (560)
T ss_pred cCCCcEEEechhhhhhheeecCCcchHHHHHHHc-CCeEEEEeCCCCChhh--cCCCHHHHHHHHHHHHHHHHHhcCC-C
Confidence 4578999999999777766311 1566777765 9999999999876664 2357888887777777766 45 7
Q ss_pred eEEEEEeccchHHHHH----HHHHhhc-ccceeEEecccccccC
Q 018952 135 KFYVVGFSMGGQVVWS----CLKYISH-RLTGAALIAPVINYWW 173 (348)
Q Consensus 135 ~~~lvG~S~Gg~ia~~----~a~~~p~-~v~~~il~~~~~~~~~ 173 (348)
++.++|+|+||.++.. +++++++ +|++++++.+..++..
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCC
Confidence 9999999999999997 7888886 7999999999887653
No 83
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.69 E-value=5.4e-16 Score=121.73 Aligned_cols=175 Identities=19% Similarity=0.231 Sum_probs=110.8
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCC-CCCC--Ccc---------chhhhHHHHHHHHH
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGE-SDPD--PKR---------TRKSLALDIEELAD 128 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~-S~~~--~~~---------~~~~~~~di~~~l~ 128 (348)
+++|.||++|++.+-..... .+.+.|++. ||.|+++|+-+-.. .... ... ..+...+++...++
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~---~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 87 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIR---DLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVD 87 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHH---HHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHH---HHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46799999999888665555 667778776 99999999865433 1111 110 12455677777777
Q ss_pred HhCC-----CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhch
Q 018952 129 QLGL-----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAP 203 (348)
Q Consensus 129 ~l~~-----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (348)
.+.. .+++.++|+|+||.+++.+|... +.+++.+..-|... ..
T Consensus 88 ~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~------~~------------------------- 135 (218)
T PF01738_consen 88 YLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP------PP------------------------- 135 (218)
T ss_dssp HHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS------GG-------------------------
T ss_pred HHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC------CC-------------------------
Confidence 7632 26999999999999999999876 57898888776100 00
Q ss_pred hhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCC
Q 018952 204 WLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNS 283 (348)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 283 (348)
. .. ...+++
T Consensus 136 -------------------------~--~~--------------------------------------------~~~~~~ 144 (218)
T PF01738_consen 136 -------------------------P--PL--------------------------------------------EDAPKI 144 (218)
T ss_dssp -------------------------G--HH--------------------------------------------HHGGG-
T ss_pred -------------------------c--ch--------------------------------------------hhhccc
Confidence 0 00 001223
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHhhC----CCceEEEeCCCCcceeeC--c-------chHHHHHHHHhcc
Q 018952 284 EGSVHLWQGDEDRLVPVILQRYISKKL----PWIRYHEIPGSGHLIADA--D-------GMTEAIIKALLLG 342 (348)
Q Consensus 284 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e--p-------~~~~~~i~~fl~~ 342 (348)
++|+++++|++|+.++.+..+.+.+.+ ...++++|||++|.+... + ++-.+.+.+||++
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 334999999999999999776666555 567999999999998773 2 2344456667654
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.69 E-value=8.7e-16 Score=120.11 Aligned_cols=179 Identities=23% Similarity=0.287 Sum_probs=103.5
Q ss_pred CccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCC------CCC---CC------CCCc----cchhh
Q 018952 58 SKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPG------YGE---SD------PDPK----RTRKS 118 (348)
Q Consensus 58 ~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G------~G~---S~------~~~~----~~~~~ 118 (348)
++.+..+.||++||+|++...|. ..........+.+++.++-|. .|. +- .+.. ..+.+
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~---~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~ 85 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFA---LLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEE 85 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHH---HHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHH
T ss_pred CCCCCceEEEEECCCCCCcchhH---HHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHH
Confidence 33456789999999999997776 333311122246677765441 222 11 0111 13334
Q ss_pred hHHHHHHHHHHh---CC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHH
Q 018952 119 LALDIEELADQL---GL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQW 194 (348)
Q Consensus 119 ~~~di~~~l~~l---~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (348)
.++.+.++++.. ++ .++++++|+|+||.+++.++.++|+.+.++|.+++..... .
T Consensus 86 s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~-------~-------------- 144 (216)
T PF02230_consen 86 SAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE-------S-------------- 144 (216)
T ss_dssp HHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG-------C--------------
T ss_pred HHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc-------c--------------
Confidence 444555555543 22 2689999999999999999999999999999999863200 0
Q ss_pred HHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCC
Q 018952 195 ALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPM 274 (348)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (348)
...
T Consensus 145 --------------------------------~~~--------------------------------------------- 147 (216)
T PF02230_consen 145 --------------------------------ELE--------------------------------------------- 147 (216)
T ss_dssp --------------------------------CCH---------------------------------------------
T ss_pred --------------------------------ccc---------------------------------------------
Confidence 000
Q ss_pred CcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC----CCceEEEeCCCCcceeeCcchHHHHHHHHhcc
Q 018952 275 DLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL----PWIRYHEIPGSGHLIADADGMTEAIIKALLLG 342 (348)
Q Consensus 275 ~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~~ 342 (348)
....... +.|++++||++|+++|.+.++...+.+ .++++..++|+||.+.. +..+.+.+||++
T Consensus 148 ~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~---~~~~~~~~~l~~ 214 (216)
T PF02230_consen 148 DRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISP---EELRDLREFLEK 214 (216)
T ss_dssp CCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--H---HHHHHHHHHHHH
T ss_pred ccccccC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH---HHHHHHHHHHhh
Confidence 0000011 445999999999999999887777665 35789999999998865 444556666643
No 85
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.68 E-value=5.7e-15 Score=106.31 Aligned_cols=172 Identities=20% Similarity=0.180 Sum_probs=117.1
Q ss_pred cCCCceEEEEcCCCC---C--chhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh---C
Q 018952 60 ELAKYKIIFVHGFGS---S--RHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL---G 131 (348)
Q Consensus 60 ~~~~~~vl~~hG~~~---~--~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l---~ 131 (348)
.++.|..|++|.-+. + ...-. .++..|.+ .||.++.+|+||.|+|...-+...-+ .+|..+.++++ .
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~---~la~~l~~-~G~atlRfNfRgVG~S~G~fD~GiGE-~~Da~aaldW~~~~h 99 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQ---TLARALVK-RGFATLRFNFRGVGRSQGEFDNGIGE-LEDAAAALDWLQARH 99 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHH---HHHHHHHh-CCceEEeecccccccccCcccCCcch-HHHHHHHHHHHHhhC
Confidence 456788888885442 2 22222 34444444 59999999999999998755443322 33444444444 3
Q ss_pred CCCe-EEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhh
Q 018952 132 LGSK-FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWN 210 (348)
Q Consensus 132 ~~~~-~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (348)
.+.+ +.+.|+|+|++|++.+|.+.|+ ....+.+.|..+.
T Consensus 100 p~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~--------------------------------------- 139 (210)
T COG2945 100 PDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA--------------------------------------- 139 (210)
T ss_pred CCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc---------------------------------------
Confidence 3223 4789999999999999999875 4445544543210
Q ss_pred hccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEE
Q 018952 211 TQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLW 290 (348)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i 290 (348)
.+.. ....+|. |.++|
T Consensus 140 --------------------~dfs---------------------------------------~l~P~P~-----~~lvi 155 (210)
T COG2945 140 --------------------YDFS---------------------------------------FLAPCPS-----PGLVI 155 (210)
T ss_pred --------------------hhhh---------------------------------------hccCCCC-----CceeE
Confidence 0000 0122343 39999
Q ss_pred EeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeCcchHHHHHHHHhc
Q 018952 291 QGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADADGMTEAIIKALLL 341 (348)
Q Consensus 291 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 341 (348)
+|+.|.+++....-++++. ...+++++++++|+++..-..+.+.+.+|+.
T Consensus 156 ~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 156 QGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred ecChhhhhcHHHHHHhhcC-CCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 9999999999998888888 4578999999999999877778899999985
No 86
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.68 E-value=4.5e-16 Score=130.64 Aligned_cols=106 Identities=12% Similarity=0.202 Sum_probs=82.3
Q ss_pred CCceEEEEcCCCCCc--hhhhhhhc-ccHHHHhh-cCcEEEEEcCCCCCCCCCCCc-cchhhhHHHHHHHHHHh------
Q 018952 62 AKYKIIFVHGFGSSR--HDAAIAAN-LSPEVVDE-LGIYIVSFDRPGYGESDPDPK-RTRKSLALDIEELADQL------ 130 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~--~~~~~~~~-~~~~l~~~-~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~di~~~l~~l------ 130 (348)
++|++|++||++++. ..|. + +...+... .+|+||++|++|+|.|..+.. ......++++.++++.|
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~---~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWV---PKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCeEEEECCCCcCCcchhhH---HHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCC
Confidence 478999999998754 4465 4 34444432 259999999999998865432 23456677777777765
Q ss_pred CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccc
Q 018952 131 GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 171 (348)
Q Consensus 131 ~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~ 171 (348)
++ ++++||||||||++|..++.++|++|.++++++|+.+.
T Consensus 117 ~l-~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 117 PW-DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CC-CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 35 79999999999999999999999999999999997653
No 87
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.67 E-value=6.2e-15 Score=131.08 Aligned_cols=125 Identities=18% Similarity=0.090 Sum_probs=95.8
Q ss_pred ecCCCeEEEEeeccCCccCCCceEEEEcCCCCCch---hhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhh
Q 018952 43 KLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRH---DAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSL 119 (348)
Q Consensus 43 ~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~---~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 119 (348)
.+.||.+|++..+-+...++.|+||++||++.+.. .+.. .....+++ +||.|+++|+||+|.|.........+.
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~--~~~~~l~~-~Gy~vv~~D~RG~g~S~g~~~~~~~~~ 78 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDK--TEPAWFVA-QGYAVVIQDTRGRGASEGEFDLLGSDE 78 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhcccccc--ccHHHHHh-CCcEEEEEeccccccCCCceEecCccc
Confidence 45689999988886544346789999999997653 2320 23344444 499999999999999986432211677
Q ss_pred HHHHHHHHHHhCC----CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 120 ALDIEELADQLGL----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 120 ~~di~~~l~~l~~----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
++|+.++++.+.. +.++.++|||+||.+++.+|..+|+++++++..++..+
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 8888888888732 35899999999999999999999999999999887654
No 88
>PRK10162 acetyl esterase; Provisional
Probab=99.64 E-value=5.3e-14 Score=116.42 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=86.5
Q ss_pred ccceeecCCCeEEEEeeccCCccCCCceEEEEcCCC---CCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc-
Q 018952 38 TAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFG---SSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK- 113 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~---~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~- 113 (348)
+...+...+| .+..+.+.+. ....|.||++||.+ ++...|. .+...+++..|+.|+.+|+|......-+..
T Consensus 58 ~~~~i~~~~g-~i~~~~y~P~-~~~~p~vv~~HGGg~~~g~~~~~~---~~~~~la~~~g~~Vv~vdYrlape~~~p~~~ 132 (318)
T PRK10162 58 RAYMVPTPYG-QVETRLYYPQ-PDSQATLFYLHGGGFILGNLDTHD---RIMRLLASYSGCTVIGIDYTLSPEARFPQAI 132 (318)
T ss_pred EEEEEecCCC-ceEEEEECCC-CCCCCEEEEEeCCcccCCCchhhh---HHHHHHHHHcCCEEEEecCCCCCCCCCCCcH
Confidence 4445555556 4666666553 23468999999977 5666777 788888887799999999997654322211
Q ss_pred cchhhhHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHHh------hcccceeEEeccccc
Q 018952 114 RTRKSLALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYI------SHRLTGAALIAPVIN 170 (348)
Q Consensus 114 ~~~~~~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~------p~~v~~~il~~~~~~ 170 (348)
.+..+..+.+.+..+.+++ .++++++|+|+||.+++.++... +.++++++++.|..+
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 1222223333333444554 26899999999999999998754 257899999988643
No 89
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.64 E-value=2.1e-15 Score=111.66 Aligned_cols=155 Identities=17% Similarity=0.206 Sum_probs=101.0
Q ss_pred EEEEcCCCCC-chhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccc
Q 018952 66 IIFVHGFGSS-RHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMG 144 (348)
Q Consensus 66 vl~~hG~~~~-~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~G 144 (348)
|+++||++++ ...|. ++.+.-.... ++|-.+|+ ...+.+++.+.+.+.++.+. +++++||||+|
T Consensus 1 v~IvhG~~~s~~~HW~---~wl~~~l~~~-~~V~~~~~---------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQ---PWLERQLENS-VRVEQPDW---------DNPDLDEWVQALDQAIDAID--EPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTH---HHHHHHHTTS-EEEEEC-----------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHH---HHHHHhCCCC-eEEecccc---------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHH
Confidence 6899999987 45576 5555555543 67776666 12277888888888877653 57999999999
Q ss_pred hHHHHHHH-HHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCccccc
Q 018952 145 GQVVWSCL-KYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVAR 223 (348)
Q Consensus 145 g~ia~~~a-~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (348)
+..+++++ .....+|++++|++|.-.. .... ..
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~-----~~~~---------------------------------~~-------- 99 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPD-----DPEP---------------------------------FP-------- 99 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCG-----CHHC---------------------------------CT--------
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcc-----cccc---------------------------------hh--------
Confidence 99999999 6667899999999986210 0000 00
Q ss_pred CcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHH
Q 018952 224 RPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQ 303 (348)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~ 303 (348)
..... -...|.....+|.++|.+++|+++|.+.+
T Consensus 100 --~~~~~--------------------------------------------f~~~p~~~l~~~~~viaS~nDp~vp~~~a 133 (171)
T PF06821_consen 100 --PELDG--------------------------------------------FTPLPRDPLPFPSIVIASDNDPYVPFERA 133 (171)
T ss_dssp --CGGCC--------------------------------------------CTTSHCCHHHCCEEEEEETTBSSS-HHHH
T ss_pred --hhccc--------------------------------------------cccCcccccCCCeEEEEcCCCCccCHHHH
Confidence 00000 00111222233489999999999999999
Q ss_pred HHHHhhCCCceEEEeCCCCcceeeC
Q 018952 304 RYISKKLPWIRYHEIPGSGHLIADA 328 (348)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~gH~~~~e 328 (348)
+++++.+ +++++.++++||+...+
T Consensus 134 ~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 134 QRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred HHHHHHc-CCCeEECCCCCCccccc
Confidence 9999998 79999999999998765
No 90
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.64 E-value=7.4e-16 Score=124.09 Aligned_cols=119 Identities=15% Similarity=0.177 Sum_probs=86.4
Q ss_pred CCeEEEEeeccCCccCCCceEEEEcCCCCCc-hhhhhhhcc-cHHHHhhcCcEEEEEcCCCCCCCCCCC-ccchhhhHHH
Q 018952 46 DGRHLAYKEHGVSKELAKYKIIFVHGFGSSR-HDAAIAANL-SPEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALD 122 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~-~~~~~~~~~-~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~d 122 (348)
++..+.+..+.+ ++|++|++||++++. ..|. .. ...++...+|+|+++|+++++.+..+. ..+....+++
T Consensus 23 ~~~~~~~~~f~~----~~p~vilIHG~~~~~~~~~~---~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~ 95 (275)
T cd00707 23 DPSSLKNSNFNP----SRPTRFIIHGWTSSGEESWI---SDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAE 95 (275)
T ss_pred ChhhhhhcCCCC----CCCcEEEEcCCCCCCCCcHH---HHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHH
Confidence 455566665643 368999999999887 6776 43 344555457999999999984332211 1244555566
Q ss_pred HHHHHHHh----CC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccc
Q 018952 123 IEELADQL----GL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 171 (348)
Q Consensus 123 i~~~l~~l----~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~ 171 (348)
+..+++.+ +. .+++++|||||||.+|..++.++|++|+++++++|..+.
T Consensus 96 la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 96 LAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 66666654 22 168999999999999999999999999999999987653
No 91
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.63 E-value=6.4e-14 Score=116.50 Aligned_cols=268 Identities=10% Similarity=0.018 Sum_probs=150.2
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCC-CCccchhhhHHHHHHHHHHhCCCCeEEEEEe
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDP-DPKRTRKSLALDIEELADQLGLGSKFYVVGF 141 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~-~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~ 141 (348)
.|+||++..+.+...... ..+++.|.. |++|+..|+.--+.... ....+++|+++-+.++++++|. + ++++|+
T Consensus 102 ~~pvLiV~Pl~g~~~~L~--RS~V~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~-~-v~l~Gv 175 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLL--RSTVEALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGP-D-IHVIAV 175 (406)
T ss_pred CCcEEEEcCCchHHHHHH--HHHHHHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCC-C-CcEEEE
Confidence 379999999987666554 156666766 79999999987775532 2345899999999999999987 5 999999
Q ss_pred ccchHHHHHHHHHh-----hcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhh------------hchh
Q 018952 142 SMGGQVVWSCLKYI-----SHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAH------------YAPW 204 (348)
Q Consensus 142 S~Gg~ia~~~a~~~-----p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 204 (348)
|+||..++.+++.+ |++++++++++++.++... + .....+............... ..|.
T Consensus 176 CqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~--p--~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG 251 (406)
T TIGR01849 176 CQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARAS--P--TVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPG 251 (406)
T ss_pred chhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCC--C--chHHHHhhcccHHHHHHHhhhccCccccCCCCcccCH
Confidence 99999988777655 5679999999998875421 0 111111110000000000000 1111
Q ss_pred hhhhhhhccCCCCCcccc--cCcccchhhhhc---chHHHHHHHhh---hhhhhhhhhhHHHHHHhhhcCCccccCCCCc
Q 018952 205 LAYWWNTQKLFPPSAVVA--RRPEIFSAQDVQ---LMPKLAVRQIN---RAQVIQQGVHESLFRDMMIGFGTWEFDPMDL 276 (348)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (348)
..........-+...... ..-..+...+.+ ....+...... ............+..+.....+.+.. ..-
T Consensus 252 ~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v--~G~ 329 (406)
T TIGR01849 252 FLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIV--EGK 329 (406)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEE--CCE
Confidence 111100000000000000 000000000111 11111110000 01111111222222222222233322 223
Q ss_pred CCCCCCCC-CcEEEEEeCCCCCCChHHHHHHHhhC---C--CceEEEeCCCCcceeeC----cchHHHHHHHHhcc
Q 018952 277 ENPFPNSE-GSVHLWQGDEDRLVPVILQRYISKKL---P--WIRYHEIPGSGHLIADA----DGMTEAIIKALLLG 342 (348)
Q Consensus 277 ~~p~~~~~-~Pvl~i~G~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~gH~~~~e----p~~~~~~i~~fl~~ 342 (348)
...+.+|+ +|++.+.|++|.++|++.++.+.+.+ + +.+....+++||+.... .+++...|.+||.+
T Consensus 330 ~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 330 RVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred EecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 44567788 88999999999999999999998875 4 34577777899987762 67888899999864
No 92
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.61 E-value=1.3e-13 Score=108.10 Aligned_cols=194 Identities=18% Similarity=0.157 Sum_probs=136.2
Q ss_pred eeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCC-CCCCCCCc------
Q 018952 41 RIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGY-GESDPDPK------ 113 (348)
Q Consensus 41 ~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~~------ 113 (348)
.+..+| .++.-+..-+......|.||++|++.+-....+ .+.++++.. ||.|+++|+-+. |.+.....
T Consensus 6 ~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~---~~a~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~~~~~~~ 80 (236)
T COG0412 6 TIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIR---DVARRLAKA-GYVVLAPDLYGRQGDPTDIEDEPAELE 80 (236)
T ss_pred EeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchHHH---HHHHHHHhC-CcEEEechhhccCCCCCcccccHHHHh
Confidence 444544 445544443443334489999999998888777 888888886 999999998773 44332110
Q ss_pred ------cchhhhHHHHHHHHHHhC-----CCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchh
Q 018952 114 ------RTRKSLALDIEELADQLG-----LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTK 182 (348)
Q Consensus 114 ------~~~~~~~~di~~~l~~l~-----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~ 182 (348)
.+..+...|+.+.++.|. ..+++.++|+||||.+++.++.+.| .+++.+..-+....
T Consensus 81 ~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~----------- 148 (236)
T COG0412 81 TGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA----------- 148 (236)
T ss_pred hhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC-----------
Confidence 123677788888888873 1368999999999999999999877 78888877764210
Q ss_pred hhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHh
Q 018952 183 EAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDM 262 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (348)
T Consensus 149 -------------------------------------------------------------------------------- 148 (236)
T COG0412 149 -------------------------------------------------------------------------------- 148 (236)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC----CCceEEEeCCCCcceeeC----------
Q 018952 263 MIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL----PWIRYHEIPGSGHLIADA---------- 328 (348)
Q Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e---------- 328 (348)
.-....+++++|+++++|+.|..+|.+....+.+.+ .++++.+++++.|.++.+
T Consensus 149 ------------~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~ 216 (236)
T COG0412 149 ------------DDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDA 216 (236)
T ss_pred ------------CcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCH
Confidence 000113345566999999999999998777776665 257899999998987732
Q ss_pred --cchHHHHHHHHhccc
Q 018952 329 --DGMTEAIIKALLLGE 343 (348)
Q Consensus 329 --p~~~~~~i~~fl~~~ 343 (348)
.+.-.+.+.+||++.
T Consensus 217 ~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 217 AAAEDAWQRVLAFFKRL 233 (236)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 234555666676654
No 93
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.61 E-value=3.9e-14 Score=107.56 Aligned_cols=230 Identities=17% Similarity=0.126 Sum_probs=140.1
Q ss_pred cceeecCCCeEEEEeeccCCcc-CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCC----CC-
Q 018952 39 APRIKLRDGRHLAYKEHGVSKE-LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDP----DP- 112 (348)
Q Consensus 39 ~~~~~~~~g~~l~y~~~g~~~~-~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~----~~- 112 (348)
..++...+|.+|.-+..-+..+ ...|.||-.||.+++...|. .++..-. .||.|+.+|.||.|.|.. ++
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~---~~l~wa~--~Gyavf~MdvRGQg~~~~dt~~~p~ 132 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWH---DMLHWAV--AGYAVFVMDVRGQGSSSQDTADPPG 132 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcc---ccccccc--cceeEEEEecccCCCccccCCCCCC
Confidence 4456666888898777655544 45789999999999998887 5554333 389999999999998832 11
Q ss_pred c-----------------cchhhhHHHHHHHHHHh-C---C-CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 113 K-----------------RTRKSLALDIEELADQL-G---L-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 113 ~-----------------~~~~~~~~di~~~l~~l-~---~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
+ +-+.....|+..+++.+ + + .+++.+.|.|.||.+++..++..| ++++++++-|..+
T Consensus 133 ~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~ 211 (321)
T COG3458 133 GPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLS 211 (321)
T ss_pred CCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccc
Confidence 1 11223344555555444 1 1 379999999999999999988765 8999999888653
Q ss_pred ccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhh
Q 018952 171 YWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVI 250 (348)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (348)
.. +.. +.. . .......+..+...-...
T Consensus 212 df----~r~-----i~~-~---------------------------------------~~~~ydei~~y~k~h~~~---- 238 (321)
T COG3458 212 DF----PRA-----IEL-A---------------------------------------TEGPYDEIQTYFKRHDPK---- 238 (321)
T ss_pred cc----hhh-----eee-c---------------------------------------ccCcHHHHHHHHHhcCch----
Confidence 10 000 000 0 000000011111000000
Q ss_pred hhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCC-ceEEEeCCCCcceeeCc
Q 018952 251 QQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPW-IRYHEIPGSGHLIADAD 329 (348)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ep 329 (348)
....+..+ ...++.+-.+++++|+|+..|-.|++|||...-..++.++. .++.+++--+|.-. |
T Consensus 239 e~~v~~TL-------------~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~--p 303 (321)
T COG3458 239 EAEVFETL-------------SYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG--P 303 (321)
T ss_pred HHHHHHHH-------------hhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC--c
Confidence 00000000 00033344556777799999999999999999999999865 56777776666443 4
Q ss_pred chHHHHHHHHhcc
Q 018952 330 GMTEAIIKALLLG 342 (348)
Q Consensus 330 ~~~~~~i~~fl~~ 342 (348)
.-..+.+..|++.
T Consensus 304 ~~~~~~~~~~l~~ 316 (321)
T COG3458 304 GFQSRQQVHFLKI 316 (321)
T ss_pred chhHHHHHHHHHh
Confidence 4444445566554
No 94
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.60 E-value=5.4e-14 Score=116.64 Aligned_cols=135 Identities=16% Similarity=0.217 Sum_probs=101.3
Q ss_pred CCCCcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhh--hhcccHHHHhhcCcEEEEEcCCCCCCCCC
Q 018952 33 GGPAITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAI--AANLSPEVVDELGIYIVSFDRPGYGESDP 110 (348)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~--~~~~~~~l~~~~g~~vi~~D~~G~G~S~~ 110 (348)
.+-+.|++.+.+.||.-+.......+. ..+|+|++.||+-+++..|-. +..-++.++.++||+|+.-+.||--.|..
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~-~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGK-KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCC-CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchh
Confidence 345689999999999988777764443 678999999999999999961 01224556666799999999999776652
Q ss_pred C----C-------ccchhhhHH-HHHHH----HHHhCCCCeEEEEEeccchHHHHHHHHHhhc---ccceeEEecccc
Q 018952 111 D----P-------KRTRKSLAL-DIEEL----ADQLGLGSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVI 169 (348)
Q Consensus 111 ~----~-------~~~~~~~~~-di~~~----l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~~il~~~~~ 169 (348)
. + +.++.+++. |+-+. ++.-+. ++++.+|||.|+...+.++...|+ +|+.+++++|..
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~-~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ-EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccc-cceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 1 1 125555433 44444 444466 899999999999999988887665 799999999986
No 95
>COG0400 Predicted esterase [General function prediction only]
Probab=99.60 E-value=2.7e-14 Score=108.12 Aligned_cols=105 Identities=26% Similarity=0.379 Sum_probs=68.9
Q ss_pred cCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCC--CCCCC----C-CCcc-------chhhhHHHHHH
Q 018952 60 ELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPG--YGESD----P-DPKR-------TRKSLALDIEE 125 (348)
Q Consensus 60 ~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G--~G~S~----~-~~~~-------~~~~~~~di~~ 125 (348)
....|+||++||+|++...+- +....+..+ +.++.+--+- .|.-. . ...+ ..+.+++-+..
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~---~~~~~~~P~--~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~ 89 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLV---PLPELILPN--ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEE 89 (207)
T ss_pred CCCCcEEEEEecCCCChhhhh---hhhhhcCCC--CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHH
Confidence 345678999999999888877 644444443 4444432110 00000 0 0011 22334444555
Q ss_pred HHHHhCC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 126 LADQLGL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 126 ~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
..+..++ .++++++|+|.||.+++.+..++|+.+++++++++..
T Consensus 90 ~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 90 LAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred HHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 5555565 3699999999999999999999999999999999864
No 96
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.59 E-value=6e-14 Score=114.69 Aligned_cols=234 Identities=18% Similarity=0.164 Sum_probs=125.2
Q ss_pred cccceeecCCCeEEEEeeccCC-ccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCC-CCCC---
Q 018952 37 ITAPRIKLRDGRHLAYKEHGVS-KELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGE-SDPD--- 111 (348)
Q Consensus 37 ~~~~~~~~~~g~~l~y~~~g~~-~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~-S~~~--- 111 (348)
....++...+|..++-+..-|. .++..|.||.+||.++....|. ..+ .++. .||.|+.+|.||+|. +...
T Consensus 56 vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~---~~~-~~a~-~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 56 VYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPF---DLL-PWAA-AGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp EEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHH---HHH-HHHH-TT-EEEEE--TTTSSSS-B-SSB
T ss_pred EEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcc---ccc-cccc-CCeEEEEecCCCCCCCCCCcccc
Confidence 3455666678888887776554 3455689999999999877776 433 2444 499999999999993 3210
Q ss_pred -----Ccc------------chhhhHHHHHHHHHHhC----C-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 112 -----PKR------------TRKSLALDIEELADQLG----L-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 112 -----~~~------------~~~~~~~di~~~l~~l~----~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
..+ -+..+..|....++.+. + ++++.+.|.|+||.+++.+|+..| +|++++...|..
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l 209 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL 209 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc
Confidence 000 12234456666666552 1 368999999999999999999865 799999998864
Q ss_pred cccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhh
Q 018952 170 NYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQV 249 (348)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (348)
... ...+........ ...+..+.... ........+.++.
T Consensus 210 ~d~---------~~~~~~~~~~~~--------y~~~~~~~~~~-------------d~~~~~~~~v~~~----------- 248 (320)
T PF05448_consen 210 CDF---------RRALELRADEGP--------YPEIRRYFRWR-------------DPHHEREPEVFET----------- 248 (320)
T ss_dssp SSH---------HHHHHHT--STT--------THHHHHHHHHH-------------SCTHCHHHHHHHH-----------
T ss_pred cch---------hhhhhcCCcccc--------HHHHHHHHhcc-------------CCCcccHHHHHHH-----------
Confidence 310 000000000000 00000000000 0000000000000
Q ss_pred hhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCC-CceEEEeCCCCcceeeC
Q 018952 250 IQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLP-WIRYHEIPGSGHLIADA 328 (348)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e 328 (348)
...+ +...-.++|+||+++-.|-.|.+|||...-...+.++ .+++.++|..||....
T Consensus 249 --L~Y~-------------------D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~- 306 (320)
T PF05448_consen 249 --LSYF-------------------DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGP- 306 (320)
T ss_dssp --HHTT--------------------HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTH-
T ss_pred --Hhhh-------------------hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchh-
Confidence 0011 1112234456669999999999999999999999986 4799999999996654
Q ss_pred cchH-HHHHHHHhc
Q 018952 329 DGMT-EAIIKALLL 341 (348)
Q Consensus 329 p~~~-~~~i~~fl~ 341 (348)
.+ .+...+||.
T Consensus 307 --~~~~~~~~~~l~ 318 (320)
T PF05448_consen 307 --EFQEDKQLNFLK 318 (320)
T ss_dssp --HHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHh
Confidence 33 455556654
No 97
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.59 E-value=1.1e-13 Score=109.83 Aligned_cols=101 Identities=19% Similarity=0.283 Sum_probs=83.2
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEecc
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSM 143 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~ 143 (348)
++|+++|+.+++...|. ++++.+..+ .+.|+.++.+|.+ ...+...+++++++...+.|.....+.++.|+|||+
T Consensus 1 ~~lf~~p~~gG~~~~y~---~la~~l~~~-~~~v~~i~~~~~~-~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~ 75 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYR---PLARALPDD-VIGVYGIEYPGRG-DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSF 75 (229)
T ss_dssp -EEEEESSTTCSGGGGH---HHHHHHTTT-EEEEEEECSTTSC-TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETH
T ss_pred CeEEEEcCCccCHHHHH---HHHHhCCCC-eEEEEEEecCCCC-CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCc
Confidence 37999999999999999 888888875 4789999999998 222334599999999888888877645999999999
Q ss_pred chHHHHHHHHHh---hcccceeEEecccc
Q 018952 144 GGQVVWSCLKYI---SHRLTGAALIAPVI 169 (348)
Q Consensus 144 Gg~ia~~~a~~~---p~~v~~~il~~~~~ 169 (348)
||.+|+++|.+- ...+..++++++..
T Consensus 76 Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 76 GGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred cHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 999999999754 23589999999753
No 98
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.58 E-value=4e-14 Score=112.15 Aligned_cols=119 Identities=18% Similarity=0.279 Sum_probs=100.2
Q ss_pred CCeEEEEeeccCCccC---CCceEEEEcCCCCCchhhhhhhcccHHHHhh--c------CcEEEEEcCCCCCCCCCCC--
Q 018952 46 DGRHLAYKEHGVSKEL---AKYKIIFVHGFGSSRHDAAIAANLSPEVVDE--L------GIYIVSFDRPGYGESDPDP-- 112 (348)
Q Consensus 46 ~g~~l~y~~~g~~~~~---~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~--~------g~~vi~~D~~G~G~S~~~~-- 112 (348)
.|.+||+....+++.+ .-.|+|++|||+|+-..+. .+++-|.+. + -|.||++.+||+|-|+.+.
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFy---kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~ 208 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFY---KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT 208 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHH---hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC
Confidence 6999999888665322 2358999999999998888 888877654 2 3899999999999999765
Q ss_pred ccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 113 KRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 113 ~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
+.+..+.|.-+..++=.||. +++.+=|..||+.|+..+|..+|++|.|+-+-.+.
T Consensus 209 GFn~~a~ArvmrkLMlRLg~-nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 209 GFNAAATARVMRKLMLRLGY-NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred CccHHHHHHHHHHHHHHhCc-ceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 45778889999999999999 79999999999999999999999999888765544
No 99
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.58 E-value=6.7e-15 Score=93.56 Aligned_cols=77 Identities=22% Similarity=0.424 Sum_probs=66.4
Q ss_pred CeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCcc--chhhhHHHHH
Q 018952 47 GRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKR--TRKSLALDIE 124 (348)
Q Consensus 47 g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~di~ 124 (348)
|.+|+|+.|.+.++ ++.+|+++||++.++..|. .+++.|.+. ||.|+++|+||||.|.....+ +++++++|+.
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry~---~~a~~L~~~-G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~ 75 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGRYA---HLAEFLAEQ-GYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLH 75 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHHHH---HHHHHHHhC-CCEEEEECCCcCCCCCCcccccCCHHHHHHHHH
Confidence 67899999966553 6889999999999999998 898888886 999999999999999865443 8899999999
Q ss_pred HHHH
Q 018952 125 ELAD 128 (348)
Q Consensus 125 ~~l~ 128 (348)
.+++
T Consensus 76 ~~~~ 79 (79)
T PF12146_consen 76 QFIQ 79 (79)
T ss_pred HHhC
Confidence 8874
No 100
>PRK10115 protease 2; Provisional
Probab=99.57 E-value=2.3e-13 Score=123.06 Aligned_cols=131 Identities=18% Similarity=0.149 Sum_probs=93.1
Q ss_pred CCcccceeecCCCeEEEEe-eccCC--ccCCCceEEEEcCCCCCchh--hhhhhcccHHHHhhcCcEEEEEcCCCCCCCC
Q 018952 35 PAITAPRIKLRDGRHLAYK-EHGVS--KELAKYKIIFVHGFGSSRHD--AAIAANLSPEVVDELGIYIVSFDRPGYGESD 109 (348)
Q Consensus 35 ~~~~~~~~~~~~g~~l~y~-~~g~~--~~~~~~~vl~~hG~~~~~~~--~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~ 109 (348)
...++..+...||.+|.+. .+.+. ..++.|.||++||..+.... |. .....+++ +||.|+.++.||-|.-.
T Consensus 414 ~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~---~~~~~l~~-rG~~v~~~n~RGs~g~G 489 (686)
T PRK10115 414 YRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFS---FSRLSLLD-RGFVYAIVHVRGGGELG 489 (686)
T ss_pred cEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCcc---HHHHHHHH-CCcEEEEEEcCCCCccC
Confidence 3456667888899999874 44232 12456999999998876543 43 44455666 49999999999965443
Q ss_pred C---C------CccchhhhHHHHHHHHHHhCC--CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 110 P---D------PKRTRKSLALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 110 ~---~------~~~~~~~~~~di~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
. . ...+++|+.+.+..+++. +. .+++.+.|.|.||.++..++.++|++++++|+..|..+
T Consensus 490 ~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 490 QQWYEDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred HHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 1 1 112555555555555543 42 37999999999999999999999999999999998764
No 101
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.55 E-value=3.1e-13 Score=101.16 Aligned_cols=89 Identities=25% Similarity=0.359 Sum_probs=66.7
Q ss_pred EEEEcCCCCCchhhhhhhcccHHHHhhcC--cEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEecc
Q 018952 66 IIFVHGFGSSRHDAAIAANLSPEVVDELG--IYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSM 143 (348)
Q Consensus 66 vl~~hG~~~~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~ 143 (348)
|+++||+.++...... ..+....++.+ .++.++|++. ...+..+.+.++++.... +.+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka--~~l~~~~~~~~~~~~~~~p~l~~----------~p~~a~~~l~~~i~~~~~-~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKA--QALKQYFAEHGPDIQYPCPDLPP----------FPEEAIAQLEQLIEELKP-ENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHH--HHHHHHHHHhCCCceEECCCCCc----------CHHHHHHHHHHHHHhCCC-CCeEEEEECh
Confidence 7999999999887762 23344443333 4566666652 566777888899988876 5699999999
Q ss_pred chHHHHHHHHHhhcccceeEEeccccc
Q 018952 144 GGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 144 Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
||..|..+|.+++ +++ |+++|...
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 9999999999875 444 99999754
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.54 E-value=1.7e-12 Score=103.93 Aligned_cols=106 Identities=16% Similarity=0.216 Sum_probs=89.5
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhh--cCcEEEEEcCCCCCCCCCC-------CccchhhhHHHHHHHHHHhC--
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDE--LGIYIVSFDRPGYGESDPD-------PKRTRKSLALDIEELADQLG-- 131 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~--~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~di~~~l~~l~-- 131 (348)
+..++||+|.+|-...|. .++..|.+. ..+.|+++.+.||-.++.. ..++++++++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv~fY~---~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~ 78 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYE---EFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQ 78 (266)
T ss_pred cEEEEEECCCCChHHHHH---HHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhh
Confidence 568999999999999999 898888876 3699999999999777654 23588888888777777652
Q ss_pred ---CCCeEEEEEeccchHHHHHHHHHhh---cccceeEEecccccc
Q 018952 132 ---LGSKFYVVGFSMGGQVVWSCLKYIS---HRLTGAALIAPVINY 171 (348)
Q Consensus 132 ---~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~~il~~~~~~~ 171 (348)
.+.+++++|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 79 ~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 79 KNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred hcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 3478999999999999999999999 789999999987653
No 103
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.54 E-value=6.7e-14 Score=110.46 Aligned_cols=102 Identities=25% Similarity=0.353 Sum_probs=62.3
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCC----CCCCCCCCCccchhhhHHHHHHHHHHhCC-----
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRP----GYGESDPDPKRTRKSLALDIEELADQLGL----- 132 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~di~~~l~~l~~----- 132 (348)
....||||.|++.+-..-.+.+.+++.| +..+|.|+-+-++ |+|.+ ++++-++||.++++++.-
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL-~~~~wsl~q~~LsSSy~G~G~~------SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEAL-EETGWSLFQVQLSSSYSGWGTS------SLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHH-T-TT-EEEEE--GGGBTTS-S--------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHh-ccCCeEEEEEEecCccCCcCcc------hhhhHHHHHHHHHHHHHHhhccc
Confidence 4568999999987654432111333444 3348999988765 55555 677778888877776521
Q ss_pred --CCeEEEEEeccchHHHHHHHHHhh-----cccceeEEeccccc
Q 018952 133 --GSKFYVVGFSMGGQVVWSCLKYIS-----HRLTGAALIAPVIN 170 (348)
Q Consensus 133 --~~~~~lvG~S~Gg~ia~~~a~~~p-----~~v~~~il~~~~~~ 170 (348)
.++++|+|||.|+.-+++|+.... ..|+++||-+|+.+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 269999999999999999998642 57999999999754
No 104
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.52 E-value=1.1e-13 Score=123.69 Aligned_cols=110 Identities=25% Similarity=0.363 Sum_probs=88.4
Q ss_pred eeecCCCeEEEEeeccCCcc------CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCC---
Q 018952 41 RIKLRDGRHLAYKEHGVSKE------LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPD--- 111 (348)
Q Consensus 41 ~~~~~~g~~l~y~~~g~~~~------~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~--- 111 (348)
.+..+++.++.|...|.+.. ...|+|||+||++++...|. .+.+.|.+. ||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~---~lA~~La~~-Gy~VIaiDlpGHG~S~~~~~~ 496 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENAL---AFAGTLAAA-GVATIAIDHPLHGARSFDANA 496 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHH---HHHHHHHhC-CcEEEEeCCCCCCcccccccc
Confidence 55667888888887765421 23468999999999999999 888888765 899999999999999432
Q ss_pred -------C--------------ccchhhhHHHHHHHHHHhC--------------C-CCeEEEEEeccchHHHHHHHHH
Q 018952 112 -------P--------------KRTRKSLALDIEELADQLG--------------L-GSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 112 -------~--------------~~~~~~~~~di~~~l~~l~--------------~-~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
. +.++++.+.|+..++..++ . ..+++++||||||.++..++..
T Consensus 497 ~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 497 SGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 0 1267888999998888886 1 2589999999999999999975
No 105
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.50 E-value=1.5e-13 Score=111.44 Aligned_cols=124 Identities=19% Similarity=0.177 Sum_probs=86.9
Q ss_pred CCeEEEEeeccC--CccCCCceEEEEcCCCCCc-hhhhhhhcccH-------HHHhhcCcEEEEEcCCCCCCCCCCCccc
Q 018952 46 DGRHLAYKEHGV--SKELAKYKIIFVHGFGSSR-HDAAIAANLSP-------EVVDELGIYIVSFDRPGYGESDPDPKRT 115 (348)
Q Consensus 46 ~g~~l~y~~~g~--~~~~~~~~vl~~hG~~~~~-~~~~~~~~~~~-------~l~~~~g~~vi~~D~~G~G~S~~~~~~~ 115 (348)
||.+|+...+-| ...++.|+||..|+.+.+. ...... .... .+.+ +||.|+..|.||.|.|.......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~-~~~~~~~~~~~~~~~-~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLA-GANPGPPSARRPFAE-RGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHH-TTCHHSHGGGHHHHH-TT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchh-hhhcccchhHHHHHh-CCCEEEEECCcccccCCCccccC
Confidence 789999988877 5556678999999999653 112100 1111 1554 59999999999999998755443
Q ss_pred hhhhHHHHHHHHHHhC---C-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccc
Q 018952 116 RKSLALDIEELADQLG---L-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 171 (348)
Q Consensus 116 ~~~~~~di~~~l~~l~---~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~ 171 (348)
..+-++|..++|+.+. . +.+|.++|.|++|..++.+|+..|..+++++...+..+.
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 5566777777777762 2 369999999999999999999888899999998887654
No 106
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.48 E-value=7.5e-13 Score=98.28 Aligned_cols=122 Identities=20% Similarity=0.255 Sum_probs=78.3
Q ss_pred ceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc----cc
Q 018952 40 PRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK----RT 115 (348)
Q Consensus 40 ~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----~~ 115 (348)
..+...||..+....+.. +.+....++.-.+.+.....++ ++.. ++.+.||+|+++|+||.|.|++... +.
T Consensus 8 ~~l~~~DG~~l~~~~~pA-~~~~~g~~~va~a~Gv~~~fYR---rfA~-~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~ 82 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPA-DGKASGRLVVAGATGVGQYFYR---RFAA-AAAKAGFEVLTFDYRGIGQSRPASLSGSQWR 82 (281)
T ss_pred cccccCCCccCccccccC-CCCCCCcEEecccCCcchhHhH---HHHH-HhhccCceEEEEecccccCCCccccccCccc
Confidence 445667999998888743 2223334555555555555555 5544 4455699999999999999986432 35
Q ss_pred hhhhHH-HHHHHHHHhCC---CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 116 RKSLAL-DIEELADQLGL---GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 116 ~~~~~~-di~~~l~~l~~---~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
+.|++. |+...++.++. +.+.+.||||+||.+.-.+.. ++ +..+....+..
T Consensus 83 ~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~g 137 (281)
T COG4757 83 YLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSG 137 (281)
T ss_pred hhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEeccc
Confidence 555543 55555555432 368999999999997655544 44 55555555543
No 107
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.44 E-value=4.9e-11 Score=89.64 Aligned_cols=124 Identities=19% Similarity=0.252 Sum_probs=78.2
Q ss_pred ceeecCCCeEEEEeeccCCccC--CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCC-CCCCCCC-ccc
Q 018952 40 PRIKLRDGRHLAYKEHGVSKEL--AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGY-GESDPDP-KRT 115 (348)
Q Consensus 40 ~~~~~~~g~~l~y~~~g~~~~~--~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S~~~~-~~~ 115 (348)
+-+...+|..|+.+..-|.+.. .+++||+..|++.....+. .++.+|+.. ||+|+-+|...| |.|++.. .++
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~a---gLA~YL~~N-GFhViRyDsl~HvGlSsG~I~eft 80 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFA---GLAEYLSAN-GFHVIRYDSLNHVGLSSGDINEFT 80 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGH---HHHHHHHTT-T--EEEE---B-------------
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHH---HHHHHHhhC-CeEEEeccccccccCCCCChhhcc
Confidence 4567789999999887554432 3589999999999999998 888888876 999999998876 8888644 568
Q ss_pred hhhhHHHHHHHHHHh---CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 116 RKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 116 ~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
+....+++..+++++ |. .++.|+.-|+.|.+|+..|.+ + .+.-+|..-+..+
T Consensus 81 ms~g~~sL~~V~dwl~~~g~-~~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVGVVn 135 (294)
T PF02273_consen 81 MSIGKASLLTVIDWLATRGI-RRIGLIAASLSARIAYEVAAD-I-NLSFLITAVGVVN 135 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-
T ss_pred hHHhHHHHHHHHHHHHhcCC-CcchhhhhhhhHHHHHHHhhc-c-CcceEEEEeeeee
Confidence 888888888888777 56 789999999999999999985 3 4777777766543
No 108
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.43 E-value=6.2e-12 Score=102.32 Aligned_cols=108 Identities=12% Similarity=0.240 Sum_probs=80.6
Q ss_pred CCceEEEEcCCCCCchhhhhh--hcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhH-----HHHHHHHHHhCCCC
Q 018952 62 AKYKIIFVHGFGSSRHDAAIA--ANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLA-----LDIEELADQLGLGS 134 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~--~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~-----~di~~~l~~l~~~~ 134 (348)
-++|+|++|.+-.....|+.. ..++..+.+ .|+.|+.+++++-..+.. ..+++++. +.+..+.+..+. +
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~-~g~~vfvIsw~nPd~~~~--~~~~edYi~e~l~~aid~v~~itg~-~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLE-QGLDVFVISWRNPDASLA--AKNLEDYILEGLSEAIDTVKDITGQ-K 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHH-cCCceEEEeccCchHhhh--hccHHHHHHHHHHHHHHHHHHHhCc-c
Confidence 468999999999887777511 123344444 599999999998665554 23555554 445555666677 8
Q ss_pred eEEEEEeccchHHHHHHHHHhhcc-cceeEEecccccccC
Q 018952 135 KFYVVGFSMGGQVVWSCLKYISHR-LTGAALIAPVINYWW 173 (348)
Q Consensus 135 ~~~lvG~S~Gg~ia~~~a~~~p~~-v~~~il~~~~~~~~~ 173 (348)
++.++|+|.||.++..+++.++.+ |++++++.+..++..
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 999999999999999999988887 999999998877643
No 109
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.39 E-value=3.7e-11 Score=92.23 Aligned_cols=117 Identities=19% Similarity=0.222 Sum_probs=78.4
Q ss_pred EEeeccCCcc--CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCC------CCc----cchhh
Q 018952 51 AYKEHGVSKE--LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDP------DPK----RTRKS 118 (348)
Q Consensus 51 ~y~~~g~~~~--~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~------~~~----~~~~~ 118 (348)
.|+.+-|+.. .+.|.||++||.+++...+.. ..-+..++++.||-|+.++......... ... .+...
T Consensus 2 ~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~-~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 2 SYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAA-GSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred cEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHh-hcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 4666655432 245899999999999887761 1235678888899999998642111110 000 11222
Q ss_pred hHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 119 LALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 119 ~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
+++.+..+.++.++ ..++++.|+|.||.++..++..+||.+.++...++.
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 23333444444444 269999999999999999999999999999888875
No 110
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.39 E-value=1.4e-11 Score=96.41 Aligned_cols=96 Identities=22% Similarity=0.323 Sum_probs=64.7
Q ss_pred EEEEcCCCC---CchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh-------CC-CC
Q 018952 66 IIFVHGFGS---SRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL-------GL-GS 134 (348)
Q Consensus 66 vl~~hG~~~---~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l-------~~-~~ 134 (348)
||++||.+- +..... .+...++++.|+.|+.+|+|=.. ..++.+..+|+.+.++.+ +. .+
T Consensus 1 v~~~HGGg~~~g~~~~~~---~~~~~la~~~g~~v~~~~Yrl~p------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHW---PFAARLAAERGFVVVSIDYRLAP------EAPFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTHH---HHHHHHHHHHTSEEEEEE---TT------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHHH---HHHHHHHhhccEEEEEeeccccc------cccccccccccccceeeecccccccccccc
Confidence 789999874 333334 56777887679999999999432 234445555555554443 22 26
Q ss_pred eEEEEEeccchHHHHHHHHHhhc----ccceeEEeccccc
Q 018952 135 KFYVVGFSMGGQVVWSCLKYISH----RLTGAALIAPVIN 170 (348)
Q Consensus 135 ~~~lvG~S~Gg~ia~~~a~~~p~----~v~~~il~~~~~~ 170 (348)
+++++|+|.||.+++.++....+ .++++++++|..+
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 99999999999999999986544 3899999999643
No 111
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.38 E-value=7e-11 Score=84.49 Aligned_cols=171 Identities=17% Similarity=0.142 Sum_probs=112.7
Q ss_pred ceEEEEcCCCCCc-hhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEec
Q 018952 64 YKIIFVHGFGSSR-HDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFS 142 (348)
Q Consensus 64 ~~vl~~hG~~~~~-~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 142 (348)
+.+|++||+.++. ..|. ..+..+.. .+-.+++.. +.....+++++.+.+.+... . ++++||+||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq------~~we~~l~-~a~rveq~~------w~~P~~~dWi~~l~~~v~a~-~-~~~vlVAHS 67 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQ------SRWESALP-NARRVEQDD------WEAPVLDDWIARLEKEVNAA-E-GPVVLVAHS 67 (181)
T ss_pred ceEEEecCCCCCChhHHH------HHHHhhCc-cchhcccCC------CCCCCHHHHHHHHHHHHhcc-C-CCeEEEEec
Confidence 5789999998765 4455 33433311 122222221 12237888888888888877 3 579999999
Q ss_pred cchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccc
Q 018952 143 MGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVA 222 (348)
Q Consensus 143 ~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (348)
+|+..+++++......|.|+++++|+-.. .+ .
T Consensus 68 LGc~~v~h~~~~~~~~V~GalLVAppd~~----~~--~------------------------------------------ 99 (181)
T COG3545 68 LGCATVAHWAEHIQRQVAGALLVAPPDVS----RP--E------------------------------------------ 99 (181)
T ss_pred ccHHHHHHHHHhhhhccceEEEecCCCcc----cc--c------------------------------------------
Confidence 99999999999877799999999985210 00 0
Q ss_pred cCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHH
Q 018952 223 RRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVIL 302 (348)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~ 302 (348)
... .... .++ ..|....--|.+++...+|++++++.
T Consensus 100 ----~~~----~~~~--------------------------------tf~----~~p~~~lpfps~vvaSrnDp~~~~~~ 135 (181)
T COG3545 100 ----IRP----KHLM--------------------------------TFD----PIPREPLPFPSVVVASRNDPYVSYEH 135 (181)
T ss_pred ----cch----hhcc--------------------------------ccC----CCccccCCCceeEEEecCCCCCCHHH
Confidence 000 0000 000 01111222349999999999999999
Q ss_pred HHHHHhhCCCceEEEeCCCCcceee----CcchHHHHHHHHhcc
Q 018952 303 QRYISKKLPWIRYHEIPGSGHLIAD----ADGMTEAIIKALLLG 342 (348)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~gH~~~~----ep~~~~~~i~~fl~~ 342 (348)
++.+++.++ +.++.+..+||..-. +..+....+.+|+.+
T Consensus 136 a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 136 AEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred HHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 999999984 778888889997654 245566777777654
No 112
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.38 E-value=1.9e-10 Score=99.33 Aligned_cols=130 Identities=18% Similarity=0.238 Sum_probs=89.1
Q ss_pred ccceeecCC---CeEEEEeeccCC-ccCCCceEEEEcCCCCCchhhhhhhccc---------------HHHHhhcCcEEE
Q 018952 38 TAPRIKLRD---GRHLAYKEHGVS-KELAKYKIIFVHGFGSSRHDAAIAANLS---------------PEVVDELGIYIV 98 (348)
Q Consensus 38 ~~~~~~~~~---g~~l~y~~~g~~-~~~~~~~vl~~hG~~~~~~~~~~~~~~~---------------~~l~~~~g~~vi 98 (348)
...++.+.+ +..++|+.+.+. ++.+.|.||+++|.++.+..+....+.- -.+.+ -.+++
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~--~~~~l 125 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN--EAYVI 125 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc--ccCeE
Confidence 355666643 678988888643 2346799999999998877663100000 01122 26799
Q ss_pred EEcCC-CCCCCCCCCc---cchhhhHHHHHHHHHHh-------CCCCeEEEEEeccchHHHHHHHHHhh----------c
Q 018952 99 SFDRP-GYGESDPDPK---RTRKSLALDIEELADQL-------GLGSKFYVVGFSMGGQVVWSCLKYIS----------H 157 (348)
Q Consensus 99 ~~D~~-G~G~S~~~~~---~~~~~~~~di~~~l~~l-------~~~~~~~lvG~S~Gg~ia~~~a~~~p----------~ 157 (348)
.+|.| |+|.|..... .+.++.++|+.++++.. +. .+++|+|||+||..+..+|.+-- -
T Consensus 126 ~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~-~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 126 YVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRA-NDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccC-CCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 99975 8888864321 35678889988888754 33 78999999999999988886521 1
Q ss_pred ccceeEEeccccc
Q 018952 158 RLTGAALIAPVIN 170 (348)
Q Consensus 158 ~v~~~il~~~~~~ 170 (348)
.++|+++-++..+
T Consensus 205 nLkGi~IGNg~~d 217 (462)
T PTZ00472 205 NLAGLAVGNGLTD 217 (462)
T ss_pred eeEEEEEeccccC
Confidence 4789999888765
No 113
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.37 E-value=1.1e-10 Score=81.63 Aligned_cols=103 Identities=20% Similarity=0.351 Sum_probs=71.5
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCC-----CCCCCCCc--cchhhhHHHHHHHHHHhCCCCe
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGY-----GESDPDPK--RTRKSLALDIEELADQLGLGSK 135 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-----G~S~~~~~--~~~~~~~~di~~~l~~l~~~~~ 135 (348)
..+||+.||.+.+.++-.+ +.....++. +|+.|.-++++-. |...+++. .-..++...+.++...+.. .+
T Consensus 14 ~~tilLaHGAGasmdSt~m-~~~a~~la~-~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~-gp 90 (213)
T COG3571 14 PVTILLAHGAGASMDSTSM-TAVAAALAR-RGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAE-GP 90 (213)
T ss_pred CEEEEEecCCCCCCCCHHH-HHHHHHHHh-CceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccC-Cc
Confidence 4688999999877554321 044455554 5999999998753 32222222 1335566666777776665 68
Q ss_pred EEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 136 FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 136 ~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
.++=|+||||.++.+++..-...|+++++++-.
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYP 123 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYP 123 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCc
Confidence 999999999999999988665569999999853
No 114
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.36 E-value=1.2e-10 Score=93.68 Aligned_cols=240 Identities=15% Similarity=0.169 Sum_probs=129.5
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcc-cHHHHhhcCcEEEEEcCCCCCCCCCCCc-----cchhh-------hHHHHH---
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANL-SPEVVDELGIYIVSFDRPGYGESDPDPK-----RTRKS-------LALDIE--- 124 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~-~~~l~~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~-------~~~di~--- 124 (348)
+.+|.+|.++|.|......+. .+ ...|.++ |+..+.+..|-||...+... .+..| .+.+..
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~--~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll 166 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRR--RLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALL 166 (348)
T ss_pred CCCceEEEecCCCccchhhhh--hhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHH
Confidence 457888889998885544431 33 5667776 99999999999998875431 12222 222333
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhchh
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYAPW 204 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (348)
.+++.-|. .++.+.|.||||.+|...|..+|..+..+-++++.... .......+.... .|......+...
T Consensus 167 ~Wl~~~G~-~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs------~vFt~Gvls~~i---~W~~L~~q~~~~ 236 (348)
T PF09752_consen 167 HWLEREGY-GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSAS------VVFTEGVLSNSI---NWDALEKQFEDT 236 (348)
T ss_pred HHHHhcCC-CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCC------cchhhhhhhcCC---CHHHHHHHhccc
Confidence 33444477 79999999999999999999999887766666654210 011111111111 111111110000
Q ss_pred hhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCCCC
Q 018952 205 LAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPNSE 284 (348)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 284 (348)
...... .... . ............+.... .....+...+. .. .+..+. +.|.-.
T Consensus 237 ~~~~~~--~~~~---~-~~~~~~~~~~~~~~~~~--------------Ea~~~m~~~md-~~----T~l~nf--~~P~dp 289 (348)
T PF09752_consen 237 VYEEEI--SDIP---A-QNKSLPLDSMEERRRDR--------------EALRFMRGVMD-SF----THLTNF--PVPVDP 289 (348)
T ss_pred chhhhh--cccc---c-CcccccchhhccccchH--------------HHHHHHHHHHH-hh----cccccc--CCCCCC
Confidence 000000 0000 0 00000000000000000 00000000000 00 011111 122222
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceee--CcchHHHHHHHHhc
Q 018952 285 GSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIAD--ADGMTEAIIKALLL 341 (348)
Q Consensus 285 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~--ep~~~~~~i~~fl~ 341 (348)
-.+.++.+++|..+|......+.+..|++++..++| ||..-. +.+.|.+.|.+-++
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 338999999999999999999999999999999986 997654 47888888887664
No 115
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.36 E-value=3.5e-11 Score=119.03 Aligned_cols=100 Identities=10% Similarity=0.047 Sum_probs=86.1
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEec
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFS 142 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 142 (348)
+++++++||++++...|. .+.+.+... ++|+++|.+|+|.+. ...++++++++++.+.++.+....+++++|||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~---~l~~~l~~~--~~v~~~~~~g~~~~~-~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFS---VLSRYLDPQ--WSIYGIQSPRPDGPM-QTATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCeEEecCCCCchHHHH---HHHHhcCCC--CcEEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 478999999999999999 888877654 899999999998763 34579999999999999987654689999999
Q ss_pred cchHHHHHHHHH---hhcccceeEEeccc
Q 018952 143 MGGQVVWSCLKY---ISHRLTGAALIAPV 168 (348)
Q Consensus 143 ~Gg~ia~~~a~~---~p~~v~~~il~~~~ 168 (348)
+||.+|.++|.+ .++++..++++++.
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999986 46789999999874
No 116
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.35 E-value=2.7e-10 Score=94.59 Aligned_cols=120 Identities=19% Similarity=0.220 Sum_probs=79.2
Q ss_pred CCeEEEEeeccC--CccCCCceEEEEcCCC---CCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhH
Q 018952 46 DGRHLAYKEHGV--SKELAKYKIIFVHGFG---SSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLA 120 (348)
Q Consensus 46 ~g~~l~y~~~g~--~~~~~~~~vl~~hG~~---~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 120 (348)
++..+.++.+.+ ....+.|+||++||.+ ++..... .....++...|+.|+.+|+|-..+-.-+. .++|..
T Consensus 60 ~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~---~~~~~~~~~~g~~vv~vdYrlaPe~~~p~--~~~d~~ 134 (312)
T COG0657 60 SGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHD---ALVARLAAAAGAVVVSVDYRLAPEHPFPA--ALEDAY 134 (312)
T ss_pred CCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhH---HHHHHHHHHcCCEEEecCCCCCCCCCCCc--hHHHHH
Confidence 444455666655 3333579999999987 3445554 56677777789999999999653332111 333322
Q ss_pred HHHHHHHHH---hCC-CCeEEEEEeccchHHHHHHHHHhhc----ccceeEEeccccc
Q 018952 121 LDIEELADQ---LGL-GSKFYVVGFSMGGQVVWSCLKYISH----RLTGAALIAPVIN 170 (348)
Q Consensus 121 ~di~~~l~~---l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~~il~~~~~~ 170 (348)
+.+..+.++ ++. .+++.++|+|.||.+++.++..-.+ ...+.+++.|..+
T Consensus 135 ~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 135 AAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred HHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 233333322 233 3789999999999999999886544 4788899998754
No 117
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.34 E-value=7e-11 Score=107.89 Aligned_cols=82 Identities=17% Similarity=0.050 Sum_probs=65.3
Q ss_pred HHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCC-------------------CCeEEEEEeccchHHH
Q 018952 88 EVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGL-------------------GSKFYVVGFSMGGQVV 148 (348)
Q Consensus 88 ~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~-------------------~~~~~lvG~S~Gg~ia 148 (348)
.+...+||.|+..|.||.|.|++.......+..+|..++++.+.- +.++.++|.|+||.++
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~ 352 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLP 352 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHH
Confidence 334445999999999999999875432224567777777777751 3799999999999999
Q ss_pred HHHHHHhhcccceeEEecccc
Q 018952 149 WSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 149 ~~~a~~~p~~v~~~il~~~~~ 169 (348)
+.+|...|..++++|..++..
T Consensus 353 ~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 353 NAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHhhCCCcceEEEeeCCCC
Confidence 999998888999999988764
No 118
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=1.3e-10 Score=105.86 Aligned_cols=225 Identities=17% Similarity=0.158 Sum_probs=142.4
Q ss_pred ccceeecCCCeEEEEeeccCCc---cCCCceEEEEcCCCCCchhhh-hhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-
Q 018952 38 TAPRIKLRDGRHLAYKEHGVSK---ELAKYKIIFVHGFGSSRHDAA-IAANLSPEVVDELGIYIVSFDRPGYGESDPDP- 112 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~~---~~~~~~vl~~hG~~~~~~~~~-~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~- 112 (348)
+...+.. +|....+...-|+. .+.-|.++.+||.+++..... +...+...+....|+.|+.+|.||.|.....-
T Consensus 499 ~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~ 577 (755)
T KOG2100|consen 499 EFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFR 577 (755)
T ss_pred eeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHH
Confidence 4445555 88888888876643 233477788899887322111 00022345566679999999999987765321
Q ss_pred --------ccchhhhHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHHhh-cccceeEEecccccccCCCCCccchh
Q 018952 113 --------KRTRKSLALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYIS-HRLTGAALIAPVINYWWPGFPANLTK 182 (348)
Q Consensus 113 --------~~~~~~~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p-~~v~~~il~~~~~~~~~~~~~~~~~~ 182 (348)
....+|+.+.+..+++..-+ .+++.++|+|.||.+++.++...| +.+++.+.++|+.++. .......
T Consensus 578 ~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~---~yds~~t 654 (755)
T KOG2100|consen 578 SALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL---YYDSTYT 654 (755)
T ss_pred HHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee---eeccccc
Confidence 12556666666666665533 278999999999999999999988 4566669999986531 1111000
Q ss_pred hhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHh
Q 018952 183 EAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDM 262 (348)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (348)
..+. . ........+..
T Consensus 655 erym-----------------------------g-----------~p~~~~~~y~e------------------------ 670 (755)
T KOG2100|consen 655 ERYM-----------------------------G-----------LPSENDKGYEE------------------------ 670 (755)
T ss_pred Hhhc-----------------------------C-----------CCccccchhhh------------------------
Confidence 0000 0 00000000000
Q ss_pred hhcCCccccCCCCcCCCCCCCCCcE-EEEEeCCCCCCChHHHHHHHhhCC----CceEEEeCCCCcceee-C-cchHHHH
Q 018952 263 MIGFGTWEFDPMDLENPFPNSEGSV-HLWQGDEDRLVPVILQRYISKKLP----WIRYHEIPGSGHLIAD-A-DGMTEAI 335 (348)
Q Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~Pv-l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e-p~~~~~~ 335 (348)
..+..++..++.|. |++||+.|.-++.+.+..+.+.+. ..+..++|+.+|.+.. + -..+...
T Consensus 671 -----------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~ 739 (755)
T KOG2100|consen 671 -----------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEK 739 (755)
T ss_pred -----------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHH
Confidence 02223344444445 999999999999998888876662 2689999999999987 4 4667777
Q ss_pred HHHHhc
Q 018952 336 IKALLL 341 (348)
Q Consensus 336 i~~fl~ 341 (348)
+..|++
T Consensus 740 ~~~~~~ 745 (755)
T KOG2100|consen 740 LDRFLR 745 (755)
T ss_pred HHHHHH
Confidence 778876
No 119
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.27 E-value=2.4e-10 Score=88.86 Aligned_cols=108 Identities=22% Similarity=0.236 Sum_probs=73.4
Q ss_pred CCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC-ccchhhhHHHHHHHH-HHh----
Q 018952 57 VSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDIEELA-DQL---- 130 (348)
Q Consensus 57 ~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di~~~l-~~l---- 130 (348)
+.+.++-|.+||+||+......|. .++.+++.. ||-|+.+|+...+...... .....+..+.+.+=+ ..+
T Consensus 11 P~~~g~yPVv~f~~G~~~~~s~Ys---~ll~hvASh-GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v 86 (259)
T PF12740_consen 11 PSSAGTYPVVLFLHGFLLINSWYS---QLLEHVASH-GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGV 86 (259)
T ss_pred cCCCCCcCEEEEeCCcCCCHHHHH---HHHHHHHhC-ceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccc
Confidence 333445799999999997777777 888888875 9999999976643321110 011122222211111 111
Q ss_pred --CCCCeEEEEEeccchHHHHHHHHHh-----hcccceeEEecccc
Q 018952 131 --GLGSKFYVVGFSMGGQVVWSCLKYI-----SHRLTGAALIAPVI 169 (348)
Q Consensus 131 --~~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~~il~~~~~ 169 (348)
+. .++.++|||-||-+|..++..+ +.+++++++++|+-
T Consensus 87 ~~D~-s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 87 KPDF-SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccc-cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 23 5899999999999999999887 45899999999973
No 120
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.27 E-value=6.6e-11 Score=91.94 Aligned_cols=162 Identities=18% Similarity=0.155 Sum_probs=86.4
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhh--c-CcEEEEEcCCCCC-----CCC-----------CCCc---------
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDE--L-GIYIVSFDRPGYG-----ESD-----------PDPK--------- 113 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~--~-g~~vi~~D~~G~G-----~S~-----------~~~~--------- 113 (348)
.++.||++||+++++..+. .+...+.+. . ++.++.+|-|--- -.. ..+.
T Consensus 3 ~k~riLcLHG~~~na~if~---~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFR---QQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT--HHHHH---HHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCCcCHHHHH---HHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 3688999999999999998 666666543 1 5788887765211 110 0010
Q ss_pred ----cchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhh--------cccceeEEecccccccCCCCCccch
Q 018952 114 ----RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS--------HRLTGAALIAPVINYWWPGFPANLT 181 (348)
Q Consensus 114 ----~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--------~~v~~~il~~~~~~~~~~~~~~~~~ 181 (348)
..+++..+.+.+.++..|. =..++|+|.||.+|..++.... ..++-+|++++.... ..
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~-------~~- 149 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP-------DP- 149 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E-------EE-
T ss_pred cccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC-------ch-
Confidence 1234444455555555442 3479999999999998886432 147888888875320 00
Q ss_pred hhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHH
Q 018952 182 KEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRD 261 (348)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (348)
.+ .
T Consensus 150 ---------------------------------------------~~----~---------------------------- 152 (212)
T PF03959_consen 150 ---------------------------------------------DY----Q---------------------------- 152 (212)
T ss_dssp ----------------------------------------------G----T----------------------------
T ss_pred ---------------------------------------------hh----h----------------------------
Confidence 00 0
Q ss_pred hhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCC-ceEEEeCCCCcceeeC
Q 018952 262 MMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPW-IRYHEIPGSGHLIADA 328 (348)
Q Consensus 262 ~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e 328 (348)
.+. .-..+++|+|.|+|++|.+++++.++.+.+.+.+ .+++..+ +||.+...
T Consensus 153 -------------~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 153 -------------ELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp -------------TTT---TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----
T ss_pred -------------hhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCC
Confidence 000 1233566699999999999999999999999877 7777786 58887764
No 121
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.27 E-value=9e-11 Score=87.14 Aligned_cols=162 Identities=19% Similarity=0.166 Sum_probs=106.9
Q ss_pred eeccCCccCCCceEEEEcCCCCCchh-hhhhhcccHHHHhhcCcEEEEEcC-CCCCCCCCCC---------ccchhhhHH
Q 018952 53 KEHGVSKELAKYKIIFVHGFGSSRHD-AAIAANLSPEVVDELGIYIVSFDR-PGYGESDPDP---------KRTRKSLAL 121 (348)
Q Consensus 53 ~~~g~~~~~~~~~vl~~hG~~~~~~~-~~~~~~~~~~l~~~~g~~vi~~D~-~G~G~S~~~~---------~~~~~~~~~ 121 (348)
+..|+.+ ++..||.+.-+-+.... -+ ..+..++.. ||.|+.||+ +|-..|...+ ..+..-.-.
T Consensus 31 Yv~gs~~--~~~~li~i~DvfG~~~~n~r---~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~ 104 (242)
T KOG3043|consen 31 YVVGSTS--SKKVLIVIQDVFGFQFPNTR---EGADKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWK 104 (242)
T ss_pred EEecCCC--CCeEEEEEEeeeccccHHHH---HHHHHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchh
Confidence 3445543 33566666654443333 33 445556655 999999996 4522222111 124444555
Q ss_pred HHHHHHHHh---CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHH
Q 018952 122 DIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRV 198 (348)
Q Consensus 122 di~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (348)
++..+++.+ +..+++.++|+||||.++..+....| .+.+.+..-|...
T Consensus 105 ~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~---------------------------- 155 (242)
T KOG3043|consen 105 DITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV---------------------------- 155 (242)
T ss_pred HHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC----------------------------
Confidence 666666655 43489999999999999988888876 6777777766421
Q ss_pred hhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCC
Q 018952 199 AHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLEN 278 (348)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (348)
+ ..
T Consensus 156 ----------------------------------------------------------------------------d-~~ 158 (242)
T KOG3043|consen 156 ----------------------------------------------------------------------------D-SA 158 (242)
T ss_pred ----------------------------------------------------------------------------C-hh
Confidence 0 00
Q ss_pred CCCCCCCcEEEEEeCCCCCCChHHHHHHHhhCCC-----ceEEEeCCCCccee
Q 018952 279 PFPNSEGSVHLWQGDEDRLVPVILQRYISKKLPW-----IRYHEIPGSGHLIA 326 (348)
Q Consensus 279 p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~ 326 (348)
...++++|++++.|+.|..+|++....+.+.+.+ .++.+++|.+|.+.
T Consensus 159 D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 159 DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 1233445599999999999999998888877732 36999999999877
No 122
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.27 E-value=2.2e-10 Score=90.08 Aligned_cols=104 Identities=25% Similarity=0.400 Sum_probs=68.7
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHH-hhcCc--E--EEEEcCCCC----CCC---CCCC--------c--cchhhh
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVV-DELGI--Y--IVSFDRPGY----GES---DPDP--------K--RTRKSL 119 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~-~~~g~--~--vi~~D~~G~----G~S---~~~~--------~--~~~~~~ 119 (348)
...|.||+||++++...+. .++..+. +. |. . ++.++.-|. |.= ...+ . .+....
T Consensus 10 ~~tPTifihG~~gt~~s~~---~mi~~~~~~~-~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~q 85 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFN---HMINRLENKQ-GVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQ 85 (255)
T ss_dssp S-EEEEEE--TTGGCCCCH---HHHHHHHHCS-TS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHH
T ss_pred CCCcEEEECCCCCChhHHH---HHHHHHHhhc-CCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHH
Confidence 3578999999999999999 8889887 43 32 2 333444432 221 1111 1 256677
Q ss_pred HHHHHHHHHHh----CCCCeEEEEEeccchHHHHHHHHHhhc-----ccceeEEeccccc
Q 018952 120 ALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISH-----RLTGAALIAPVIN 170 (348)
Q Consensus 120 ~~di~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~~il~~~~~~ 170 (348)
++.+..++..| ++ +++.+|||||||..++.++..+.. ++..+|.+++..+
T Consensus 86 a~wl~~vl~~L~~~Y~~-~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 86 AKWLKKVLKYLKKKYHF-KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHHHCC---SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHHHHHhcCC-CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 88888877776 67 899999999999999999987532 5899999998654
No 123
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.26 E-value=1.4e-10 Score=89.63 Aligned_cols=116 Identities=22% Similarity=0.293 Sum_probs=74.4
Q ss_pred CCCeEEEEeeccCCc----cCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCC-------------C
Q 018952 45 RDGRHLAYKEHGVSK----ELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYG-------------E 107 (348)
Q Consensus 45 ~~g~~l~y~~~g~~~----~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G-------------~ 107 (348)
..|.++.|+.+-|.+ .+.-|.+||+||.|..+..-. ..+....| .++++.+-.+ .
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~------~~l~sg~g--aiawa~pedqcfVlAPQy~~if~d 240 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND------KVLSSGIG--AIAWAGPEDQCFVLAPQYNPIFAD 240 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh------hhhhcCcc--ceeeecccCceEEEcccccccccc
Confidence 458899999986522 222389999999998766544 23333222 3444443333 1
Q ss_pred CCCCCccchhhhHHHHH-HHHHHhCC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 108 SDPDPKRTRKSLALDIE-ELADQLGL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 108 S~~~~~~~~~~~~~di~-~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
++..+..-.....+-+. .+.++.++ ..+++++|.|+||.-++.++.++|+.+.+.+++++.
T Consensus 241 ~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 241 SEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred cccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 22211112223333333 33344455 268999999999999999999999999999999985
No 124
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=1.2e-09 Score=93.13 Aligned_cols=228 Identities=17% Similarity=0.105 Sum_probs=141.1
Q ss_pred ccceeecCCCeEEEEeeccCCc---cCCCceEEEEcCCCCCc---hhhhhhhcc--cHHHHhhcCcEEEEEcCCCCCCCC
Q 018952 38 TAPRIKLRDGRHLAYKEHGVSK---ELAKYKIIFVHGFGSSR---HDAAIAANL--SPEVVDELGIYIVSFDRPGYGESD 109 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~~---~~~~~~vl~~hG~~~~~---~~~~~~~~~--~~~l~~~~g~~vi~~D~~G~G~S~ 109 (348)
+...+....|.+++-..+.+.+ .+.-|+++++-|.++-. ..|.-. .. +..|+. .||-|+.+|.||.-...
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi-~ylR~~~Las-lGy~Vv~IDnRGS~hRG 691 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGI-QYLRFCRLAS-LGYVVVFIDNRGSAHRG 691 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccce-ehhhhhhhhh-cceEEEEEcCCCccccc
Confidence 4445566667777767775432 12358999999998632 222200 11 233444 59999999999975554
Q ss_pred CCC--------c-cchhhhHHHHHHHHHHhCC--CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccccCCCCCc
Q 018952 110 PDP--------K-RTRKSLALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINYWWPGFPA 178 (348)
Q Consensus 110 ~~~--------~-~~~~~~~~di~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~~~~~~~~ 178 (348)
..- + -..+|+++-+.-+.++.|. -+++.+-|||+||+++++...++|+.++..|.-+|+..+. ...
T Consensus 692 lkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~---~YD 768 (867)
T KOG2281|consen 692 LKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWR---LYD 768 (867)
T ss_pred hhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeee---eec
Confidence 211 1 2678999999999888853 2799999999999999999999999888888777764321 000
Q ss_pred cchhhhhhcccchhHHHHHHhhhchhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHH
Q 018952 179 NLTKEAYYLQLPQDQWALRVAHYAPWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESL 258 (348)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (348)
....+.+... ...+. ++....-
T Consensus 769 TgYTERYMg~----------------------------------------P~~nE------------------~gY~agS 790 (867)
T KOG2281|consen 769 TGYTERYMGY----------------------------------------PDNNE------------------HGYGAGS 790 (867)
T ss_pred ccchhhhcCC----------------------------------------Cccch------------------hcccchh
Confidence 0000000000 00000 0000000
Q ss_pred HHHhhhcCCccccCCCCcCCCCCCCCCcEEEEEeCCCCCCChHHHHHHHhhC----CCceEEEeCCCCcceee-C-cchH
Q 018952 259 FRDMMIGFGTWEFDPMDLENPFPNSEGSVHLWQGDEDRLVPVILQRYISKKL----PWIRYHEIPGSGHLIAD-A-DGMT 332 (348)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~p~~~~~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-e-p~~~ 332 (348)
...... + +|.-..-.|++||--|.-|.-.....+.+.+ +.-++.++|+--|.+-. | ..-.
T Consensus 791 V~~~Ve----------k----lpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~y 856 (867)
T KOG2281|consen 791 VAGHVE----------K----LPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYY 856 (867)
T ss_pred HHHHHh----------h----CCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhH
Confidence 000000 1 1111122899999999999877776666554 44699999999999876 5 6667
Q ss_pred HHHHHHHhcc
Q 018952 333 EAIIKALLLG 342 (348)
Q Consensus 333 ~~~i~~fl~~ 342 (348)
...+..|+.+
T Consensus 857 E~rll~FlQ~ 866 (867)
T KOG2281|consen 857 EARLLHFLQE 866 (867)
T ss_pred HHHHHHHHhh
Confidence 7778888865
No 125
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.21 E-value=3e-10 Score=83.01 Aligned_cols=203 Identities=11% Similarity=0.074 Sum_probs=120.1
Q ss_pred EEEEeeccCCccCCCceEEEEcCCC---CCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC--ccchhhhHHHH
Q 018952 49 HLAYKEHGVSKELAKYKIIFVHGFG---SSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLALDI 123 (348)
Q Consensus 49 ~l~y~~~g~~~~~~~~~vl~~hG~~---~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~di 123 (348)
+-....||+. ...+..||+||.- ++..... ....- +.+.||+|..+++ +.+.... ..++.+..+-+
T Consensus 55 ~q~VDIwg~~--~~~klfIfIHGGYW~~g~rk~cl---siv~~-a~~~gY~vasvgY---~l~~q~htL~qt~~~~~~gv 125 (270)
T KOG4627|consen 55 RQLVDIWGST--NQAKLFIFIHGGYWQEGDRKMCL---SIVGP-AVRRGYRVASVGY---NLCPQVHTLEQTMTQFTHGV 125 (270)
T ss_pred ceEEEEecCC--CCccEEEEEecchhhcCchhccc---chhhh-hhhcCeEEEEecc---CcCcccccHHHHHHHHHHHH
Confidence 4557778763 4578999999954 3333333 33333 3345999998854 4443211 12344444445
Q ss_pred HHHHHHhCCCCeEEEEEeccchHHHHHHHHH-hhcccceeEEecccccccCCCCCccchhhhhhcccchhHHHHHHhhhc
Q 018952 124 EELADQLGLGSKFYVVGFSMGGQVVWSCLKY-ISHRLTGAALIAPVINYWWPGFPANLTKEAYYLQLPQDQWALRVAHYA 202 (348)
Q Consensus 124 ~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~-~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (348)
.-+++....-+++.+-|||.|+++|+....+ +..+|.++++.++.... +.+..
T Consensus 126 ~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l-----------~EL~~--------------- 179 (270)
T KOG4627|consen 126 NFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL-----------RELSN--------------- 179 (270)
T ss_pred HHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH-----------HHHhC---------------
Confidence 5555555432567777899999999888775 34489999999876421 00000
Q ss_pred hhhhhhhhhccCCCCCcccccCcccchhhhhcchHHHHHHHhhhhhhhhhhhhHHHHHHhhhcCCccccCCCCcCCCCCC
Q 018952 203 PWLAYWWNTQKLFPPSAVVARRPEIFSAQDVQLMPKLAVRQINRAQVIQQGVHESLFRDMMIGFGTWEFDPMDLENPFPN 282 (348)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 282 (348)
........+.+...+.... ++ ..+..
T Consensus 180 -----------------te~g~dlgLt~~~ae~~Sc------------------------------------dl-~~~~~ 205 (270)
T KOG4627|consen 180 -----------------TESGNDLGLTERNAESVSC------------------------------------DL-WEYTD 205 (270)
T ss_pred -----------------CccccccCcccchhhhcCc------------------------------------cH-HHhcC
Confidence 0000001111111110000 00 01334
Q ss_pred CCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-----cchHHHHHHHHh
Q 018952 283 SEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-----DGMTEAIIKALL 340 (348)
Q Consensus 283 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-----p~~~~~~i~~fl 340 (348)
+++|++++.|+.|.---.+..+.+.++...+++..+++.+|+-..+ ...+...++.|+
T Consensus 206 v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 206 VTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred ceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 5555999999999877788889999999999999999999987653 234445555544
No 126
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.20 E-value=2.5e-08 Score=81.60 Aligned_cols=126 Identities=16% Similarity=0.190 Sum_probs=90.0
Q ss_pred cceeecCCCeEEEEeeccCCcc---CCCceEEEEcCCCC-----CchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCC
Q 018952 39 APRIKLRDGRHLAYKEHGVSKE---LAKYKIIFVHGFGS-----SRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDP 110 (348)
Q Consensus 39 ~~~~~~~~g~~l~y~~~g~~~~---~~~~~vl~~hG~~~-----~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~ 110 (348)
...+.......+..+.+-+... +..|.|||+||.|- ....+. .+...++.+.+..|+.+|+|=--+..-
T Consensus 63 ~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~---~~~~~~a~~~~~vvvSVdYRLAPEh~~ 139 (336)
T KOG1515|consen 63 SKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYD---SFCTRLAAELNCVVVSVDYRLAPEHPF 139 (336)
T ss_pred eeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhH---HHHHHHHHHcCeEEEecCcccCCCCCC
Confidence 3455555667777777755432 34689999999883 355666 778888888889999999996544443
Q ss_pred CCccchhhhHHHHHHHHHH----h--CCCCeEEEEEeccchHHHHHHHHHh------hcccceeEEeccccc
Q 018952 111 DPKRTRKSLALDIEELADQ----L--GLGSKFYVVGFSMGGQVVWSCLKYI------SHRLTGAALIAPVIN 170 (348)
Q Consensus 111 ~~~~~~~~~~~di~~~l~~----l--~~~~~~~lvG~S~Gg~ia~~~a~~~------p~~v~~~il~~~~~~ 170 (348)
|. .++|-.+.+.-+.++ . +. +++.|+|-|.||.+|..+|.+. +-++++.|++.|...
T Consensus 140 Pa--~y~D~~~Al~w~~~~~~~~~~~D~-~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 140 PA--AYDDGWAALKWVLKNSWLKLGADP-SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred Cc--cchHHHHHHHHHHHhHHHHhCCCc-ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 33 455555555555553 1 34 7899999999999999988753 247999999999864
No 127
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.19 E-value=2.3e-10 Score=89.24 Aligned_cols=103 Identities=19% Similarity=0.195 Sum_probs=69.9
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhh-------cCcEEEEEcCCCCCCCCCCCccchhhhH----HHHHHHHHHh
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDE-------LGIYIVSFDRPGYGESDPDPKRTRKSLA----LDIEELADQL 130 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~-------~g~~vi~~D~~G~G~S~~~~~~~~~~~~----~di~~~l~~l 130 (348)
++.+||||||.+++...|+ .+.....++ ..++++++|+......-. ...+.+.+ +.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~r---sl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~--g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVR---SLASELQRKALLNDNSSHFDFFTVDFNEELSAFH--GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHHH---HHHHHHhhhhhhccCccceeEEEeccCccccccc--cccHHHHHHHHHHHHHHHHHhh
Confidence 4689999999999988887 665555221 147899999876532221 12333333 3444444444
Q ss_pred ----CCCCeEEEEEeccchHHHHHHHHHhh---cccceeEEecccc
Q 018952 131 ----GLGSKFYVVGFSMGGQVVWSCLKYIS---HRLTGAALIAPVI 169 (348)
Q Consensus 131 ----~~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~~il~~~~~ 169 (348)
..++++++|||||||.+|..++...+ +.|+.+|.++++.
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 22379999999999999988876533 4799999999754
No 128
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.16 E-value=3.7e-09 Score=88.61 Aligned_cols=77 Identities=14% Similarity=0.210 Sum_probs=59.7
Q ss_pred cCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhC---CC-CeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 93 LGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLG---LG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 93 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~---~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
.|+.|+.+.+. ..+.+..+++|.+.....+++.+. .+ .|.+++|.|.||+.++.+|+.+|+.+..+|+-+++
T Consensus 99 ~GHPvYFV~F~----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 99 AGHPVYFVGFF----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred cCCCeEEEEec----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 37888877664 233345588888777777776652 11 38999999999999999999999999999999988
Q ss_pred ccccC
Q 018952 169 INYWW 173 (348)
Q Consensus 169 ~~~~~ 173 (348)
..|+.
T Consensus 175 lsywa 179 (581)
T PF11339_consen 175 LSYWA 179 (581)
T ss_pred ccccc
Confidence 87764
No 129
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.15 E-value=3.5e-10 Score=87.68 Aligned_cols=48 Identities=13% Similarity=0.216 Sum_probs=36.0
Q ss_pred HHHHHHHHHh-CC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 121 LDIEELADQL-GL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 121 ~di~~~l~~l-~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
+...++++.. .. ++++.|+|.|.||-+|+.+|..+| .|+++|.++|..
T Consensus 7 e~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 7 EEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 3344444433 33 269999999999999999999998 799999999864
No 130
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.15 E-value=5.1e-10 Score=94.11 Aligned_cols=101 Identities=23% Similarity=0.376 Sum_probs=59.9
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCC-CCC-----CC-----C-------C-------cc--
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGY-GES-----DP-----D-------P-------KR-- 114 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~-G~S-----~~-----~-------~-------~~-- 114 (348)
.-|+|||-||++++...+. .++.+|+.+ ||-|+++|.|.. +.. +. . . ..
T Consensus 99 ~~PvvIFSHGlgg~R~~yS---~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYS---AICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp -EEEEEEE--TT--TTTTH---HHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCEEEEeCCCCcchhhHH---HHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 3689999999999999999 899999987 999999999953 110 00 0 0 00
Q ss_pred ---------chhhhHHHHHHHHHHh--------------------------CCCCeEEEEEeccchHHHHHHHHHhhccc
Q 018952 115 ---------TRKSLALDIEELADQL--------------------------GLGSKFYVVGFSMGGQVVWSCLKYISHRL 159 (348)
Q Consensus 115 ---------~~~~~~~di~~~l~~l--------------------------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v 159 (348)
-++.-++++..+++.+ +. +++.++|||+||..++..+.+. .++
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~-~~i~~~GHSFGGATa~~~l~~d-~r~ 252 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDL-SRIGLAGHSFGGATALQALRQD-TRF 252 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEE-EEEEEEEETHHHHHHHHHHHH--TT-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcch-hheeeeecCchHHHHHHHHhhc-cCc
Confidence 0011123344444333 12 5799999999999999888764 689
Q ss_pred ceeEEeccc
Q 018952 160 TGAALIAPV 168 (348)
Q Consensus 160 ~~~il~~~~ 168 (348)
++.|++++.
T Consensus 253 ~~~I~LD~W 261 (379)
T PF03403_consen 253 KAGILLDPW 261 (379)
T ss_dssp -EEEEES--
T ss_pred ceEEEeCCc
Confidence 999999985
No 131
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.13 E-value=2e-09 Score=80.10 Aligned_cols=58 Identities=17% Similarity=0.263 Sum_probs=45.5
Q ss_pred CCCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC---cchHHHHHHHHhc
Q 018952 283 SEGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA---DGMTEAIIKALLL 341 (348)
Q Consensus 283 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e---p~~~~~~i~~fl~ 341 (348)
+++|.|.|.|+.|.++|...++.+++.+++..+..-| +||++... -+.+.+.|..++.
T Consensus 162 i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 162 LSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred CCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHH
Confidence 5555999999999999999999999999999766666 59998873 3445555555544
No 132
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.10 E-value=2.8e-09 Score=81.35 Aligned_cols=103 Identities=19% Similarity=0.207 Sum_probs=73.9
Q ss_pred CCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh------
Q 018952 57 VSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL------ 130 (348)
Q Consensus 57 ~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l------ 130 (348)
+...+.-|.|+|+||+......|. .++..++.. ||-|+++++-..-. +. -.+-+++..++++++
T Consensus 40 P~~~G~yPVilF~HG~~l~ns~Ys---~lL~HIASH-GfIVVAPQl~~~~~---p~---~~~Ei~~aa~V~~WL~~gL~~ 109 (307)
T PF07224_consen 40 PSEAGTYPVILFLHGFNLYNSFYS---QLLAHIASH-GFIVVAPQLYTLFP---PD---GQDEIKSAASVINWLPEGLQH 109 (307)
T ss_pred CCcCCCccEEEEeechhhhhHHHH---HHHHHHhhc-CeEEEechhhcccC---CC---chHHHHHHHHHHHHHHhhhhh
Confidence 333345689999999999988888 888888875 99999999875311 11 112233333333333
Q ss_pred --------CCCCeEEEEEeccchHHHHHHHHHhh--cccceeEEeccccc
Q 018952 131 --------GLGSKFYVVGFSMGGQVVWSCLKYIS--HRLTGAALIAPVIN 170 (348)
Q Consensus 131 --------~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~~il~~~~~~ 170 (348)
++ .++.++|||.||..|..+|..+. -++.++|.++|+..
T Consensus 110 ~Lp~~V~~nl-~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 110 VLPENVEANL-SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred hCCCCccccc-ceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 23 69999999999999999998763 25889999998743
No 133
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.10 E-value=1.2e-08 Score=80.17 Aligned_cols=100 Identities=18% Similarity=0.311 Sum_probs=84.9
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEecc
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSM 143 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~ 143 (348)
|++.++|+.++....|. ++...+... ..|+..+.||+|.-. ....+++++++...+.|.......+++|+|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~---~L~~~l~~~--~~v~~l~a~g~~~~~-~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYA---PLAAALGPL--LPVYGLQAPGYGAGE-QPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHH---HHHHHhccC--ceeeccccCcccccc-cccCCHHHHHHHHHHHHHHhCCCCCEEEEeecc
Confidence 57999999999999999 888888776 779999999998622 234489999999999998887767999999999
Q ss_pred chHHHHHHHHHh---hcccceeEEecccc
Q 018952 144 GGQVVWSCLKYI---SHRLTGAALIAPVI 169 (348)
Q Consensus 144 Gg~ia~~~a~~~---p~~v~~~il~~~~~ 169 (348)
||.+|+.+|.+- .+.|..++++++..
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~ 103 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVP 103 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCC
Confidence 999999999853 34799999999864
No 134
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.08 E-value=2.8e-08 Score=75.16 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=80.5
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcC--cEEEEEcCCCCCCCC---C-------CCccchhhhHHHHHHHHH
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELG--IYIVSFDRPGYGESD---P-------DPKRTRKSLALDIEELAD 128 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~---~-------~~~~~~~~~~~di~~~l~ 128 (348)
..++.++++.|.+|....|. ++...|....+ +.++.+-..||-.-. . .+.++++++++.-.++++
T Consensus 27 ~~~~li~~IpGNPG~~gFY~---~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYT---EFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCceEEEEecCCCCchhHHH---HHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 35788999999999999998 88888887654 568888888875433 1 112478888888777777
Q ss_pred Hh-CCCCeEEEEEeccchHHHHHHHHHhh--cccceeEEecccc
Q 018952 129 QL-GLGSKFYVVGFSMGGQVVWSCLKYIS--HRLTGAALIAPVI 169 (348)
Q Consensus 129 ~l-~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~~il~~~~~ 169 (348)
.. ..+.+++++|||-|+++.+.+..... -.|.+++++=|..
T Consensus 104 ~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 104 EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 65 33579999999999999999987432 2578888877654
No 135
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.07 E-value=3.3e-09 Score=77.94 Aligned_cols=97 Identities=22% Similarity=0.374 Sum_probs=71.4
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh----CCCCeEEEE
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL----GLGSKFYVV 139 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l----~~~~~~~lv 139 (348)
..+||+-|=++-...=. .+.+.|.++ |+.|+.+|-+-+=-+. .+.++.+.|+..++++. +. ++++|+
T Consensus 3 t~~v~~SGDgGw~~~d~---~~a~~l~~~-G~~VvGvdsl~Yfw~~----rtP~~~a~Dl~~~i~~y~~~w~~-~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDK---QIAEALAKQ-GVPVVGVDSLRYFWSE----RTPEQTAADLARIIRHYRARWGR-KRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchhhhH---HHHHHHHHC-CCeEEEechHHHHhhh----CCHHHHHHHHHHHHHHHHHHhCC-ceEEEE
Confidence 45778887666543333 455666665 9999999976554443 37778888888888766 45 799999
Q ss_pred EeccchHHHHHHHHHhh----cccceeEEecccc
Q 018952 140 GFSMGGQVVWSCLKYIS----HRLTGAALIAPVI 169 (348)
Q Consensus 140 G~S~Gg~ia~~~a~~~p----~~v~~~il~~~~~ 169 (348)
|+|+|+-+.-....+.| ++|+.++|+++..
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99999988877666655 4799999999863
No 136
>PRK04940 hypothetical protein; Provisional
Probab=99.06 E-value=9.8e-09 Score=75.35 Aligned_cols=87 Identities=14% Similarity=0.204 Sum_probs=54.3
Q ss_pred EEEEcCCCCCchh--hhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh-C--CCCeEEEEE
Q 018952 66 IIFVHGFGSSRHD--AAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL-G--LGSKFYVVG 140 (348)
Q Consensus 66 vl~~hG~~~~~~~--~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l-~--~~~~~~lvG 140 (348)
||++||+.+++.. ... .....+ .-+.+++ +++ ..+..+..+.+.+.+..+ . ..+++.+||
T Consensus 2 IlYlHGF~SS~~S~~~Ka--~~l~~~--~p~~~~~--~l~---------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liG 66 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKV--LQLQFI--DPDVRLI--SYS---------TLHPKHDMQHLLKEVDKMLQLSDDERPLICG 66 (180)
T ss_pred EEEeCCCCCCCCccHHHH--Hhheee--CCCCeEE--ECC---------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEE
Confidence 7999999999887 651 111211 1123333 222 113344444555555432 1 115799999
Q ss_pred eccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 141 FSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 141 ~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
.|+||..|..+|.++. + ..|+++|...
T Consensus 67 SSLGGyyA~~La~~~g--~-~aVLiNPAv~ 93 (180)
T PRK04940 67 VGLGGYWAERIGFLCG--I-RQVIFNPNLF 93 (180)
T ss_pred eChHHHHHHHHHHHHC--C-CEEEECCCCC
Confidence 9999999999999976 2 6789999753
No 137
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.04 E-value=2.9e-09 Score=78.76 Aligned_cols=102 Identities=23% Similarity=0.311 Sum_probs=69.5
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCC-------------------CCCCccchhhhHHHH
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGES-------------------DPDPKRTRKSLALDI 123 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S-------------------~~~~~~~~~~~~~di 123 (348)
..+||++||.+.+...|. +++..+..+ +..-|++..|-.-.+ ......+....++.+
T Consensus 3 ~atIi~LHglGDsg~~~~---~~~~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i 78 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWA---QFLKQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNI 78 (206)
T ss_pred eEEEEEEecCCCCCccHH---HHHHcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHH
Confidence 458999999999999998 777775443 455666643321111 011112444556666
Q ss_pred HHHHHHh---CC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 124 EELADQL---GL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 124 ~~~l~~l---~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
..++++. ++ ..++.+-|.|+||.+++..+..+|..+.+.+-..+.
T Consensus 79 ~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 79 ANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 6666654 33 257899999999999999999998888888777664
No 138
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.00 E-value=1.8e-08 Score=78.68 Aligned_cols=127 Identities=17% Similarity=0.221 Sum_probs=88.9
Q ss_pred cceeecCCCeEEEEeeccCCcc-CCCceEEEEcCCCCCchhhhhhhccc--HHHHhhcCcEEEEEcC-CC------CCCC
Q 018952 39 APRIKLRDGRHLAYKEHGVSKE-LAKYKIIFVHGFGSSRHDAAIAANLS--PEVVDELGIYIVSFDR-PG------YGES 108 (348)
Q Consensus 39 ~~~~~~~~g~~l~y~~~g~~~~-~~~~~vl~~hG~~~~~~~~~~~~~~~--~~l~~~~g~~vi~~D~-~G------~G~S 108 (348)
..++.. +|.+..|+.+-|+.. +..|.||.+||.+++..... ... +.++++.||-|+.+|- ++ .|.+
T Consensus 37 ~~s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~---~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~ 112 (312)
T COG3509 37 VASFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQL---HGTGWDALADREGFLVAYPDGYDRAWNANGCGNW 112 (312)
T ss_pred cccccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhh---cccchhhhhcccCcEEECcCccccccCCCccccc
Confidence 344444 777788888866543 34578899999999988777 554 7888888999999952 22 2222
Q ss_pred CCCCc-c----chhhhHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 109 DPDPK-R----TRKSLALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 109 ~~~~~-~----~~~~~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
..+.+ . +...+++.+..++.+.++ ..++++.|.|-||.++..+++.+|+.+.++..+++..
T Consensus 113 ~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 113 FGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 22221 1 222333344444445566 2599999999999999999999999999999998764
No 139
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.99 E-value=2e-08 Score=81.67 Aligned_cols=62 Identities=27% Similarity=0.353 Sum_probs=46.2
Q ss_pred CCCcEEEEEeCCCCCCChHHHHHHHhhC-----CCceEEEeCCCCcceee-C-cchHHHHHHHHhcccc
Q 018952 283 SEGSVHLWQGDEDRLVPVILQRYISKKL-----PWIRYHEIPGSGHLIAD-A-DGMTEAIIKALLLGEK 344 (348)
Q Consensus 283 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl~~~~ 344 (348)
.+.|+++.+|..|.++|...++++.+.+ .++++..+++.+|.... . -....+.|.+-|++..
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHCCCC
Confidence 3667999999999999999887776654 35788889999998754 2 4455566666665543
No 140
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.99 E-value=1.6e-07 Score=71.43 Aligned_cols=102 Identities=21% Similarity=0.302 Sum_probs=74.6
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcC----cEEEEEcCCCC----CCCCCC---C---------ccchhhhHHHH
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELG----IYIVSFDRPGY----GESDPD---P---------KRTRKSLALDI 123 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g----~~vi~~D~~G~----G~S~~~---~---------~~~~~~~~~di 123 (348)
-|.+||||.+++..... .++.++..+.. --++.+|--|- |.=++. + ..+..++...+
T Consensus 46 iPTIfIhGsgG~asS~~---~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 46 IPTIFIHGSGGTASSLN---GMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred cceEEEecCCCChhHHH---HHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 47899999999999999 88898888621 12566666661 111111 1 12566777777
Q ss_pred HHHHHHh----CCCCeEEEEEeccchHHHHHHHHHhhc-----ccceeEEecccc
Q 018952 124 EELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISH-----RLTGAALIAPVI 169 (348)
Q Consensus 124 ~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~~il~~~~~ 169 (348)
..++..| ++ +++.+|||||||.-...|+..+.+ .++.+|.+++..
T Consensus 123 k~~msyL~~~Y~i-~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 123 KKAMSYLQKHYNI-PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHHHHhcCC-ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 7777766 57 899999999999999999987653 488999998754
No 141
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.96 E-value=1.1e-09 Score=90.13 Aligned_cols=105 Identities=14% Similarity=0.245 Sum_probs=66.8
Q ss_pred CCCceEEEEcCCCCCc--hhhhhhhcccHHHHhh--cCcEEEEEcCCCCCCCCCCCcc-----chhhhHHHHHHHHHHh-
Q 018952 61 LAKYKIIFVHGFGSSR--HDAAIAANLSPEVVDE--LGIYIVSFDRPGYGESDPDPKR-----TRKSLALDIEELADQL- 130 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~--~~~~~~~~~~~~l~~~--~g~~vi~~D~~G~G~S~~~~~~-----~~~~~~~di~~~l~~l- 130 (348)
.++|+++++|||.++. ..|.. .+...+.+. .+++||++|+...-.. .| ......+.+..+++.|
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~--~~~~all~~~~~d~NVI~VDWs~~a~~----~Y~~a~~n~~~vg~~la~~l~~L~ 142 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQ--DMIKALLQKDTGDYNVIVVDWSRGASN----NYPQAVANTRLVGRQLAKFLSFLI 142 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHH--HHHHHHHCC--S-EEEEEEE-HHHHSS-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHH--HHHHHHHhhccCCceEEEEcchhhccc----cccchhhhHHHHHHHHHHHHHHHH
Confidence 3579999999999877 45652 455556665 5799999999642111 12 2333444444444443
Q ss_pred ---CC-CCeEEEEEeccchHHHHHHHHHhhc--ccceeEEecccccc
Q 018952 131 ---GL-GSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPVINY 171 (348)
Q Consensus 131 ---~~-~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~~il~~~~~~~ 171 (348)
+. .+++++||||+||++|-.++..... ++.+++.++|+.+.
T Consensus 143 ~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 143 NNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp HHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 33 2799999999999999988887766 89999999998764
No 142
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.94 E-value=1.5e-08 Score=80.83 Aligned_cols=114 Identities=25% Similarity=0.346 Sum_probs=83.4
Q ss_pred cceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhh---hhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccc
Q 018952 39 APRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAI---AANLSPEVVDELGIYIVSFDRPGYGESDPDPKRT 115 (348)
Q Consensus 39 ~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~---~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~ 115 (348)
+..+.. |+..|--.....++..+...||+.-|.++..+...+ ....+..+++..+-+|+.+++||.|.|.+.. +
T Consensus 114 Rv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~--s 190 (365)
T PF05677_consen 114 RVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP--S 190 (365)
T ss_pred eEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--C
Confidence 334444 888886666655555667899999998876555110 0023556677678899999999999998766 5
Q ss_pred hhhhHHHHHHHHHHhC-----C-CCeEEEEEeccchHHHHHHHHHh
Q 018952 116 RKSLALDIEELADQLG-----L-GSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 116 ~~~~~~di~~~l~~l~-----~-~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
.++++.|-.+.++.|. + .+++++.|||+||.++..++.++
T Consensus 191 ~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 191 RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 6888888888777773 1 26899999999999998866654
No 143
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.93 E-value=1.5e-08 Score=82.70 Aligned_cols=130 Identities=17% Similarity=0.201 Sum_probs=71.1
Q ss_pred cccceeecCCCeEEEEeeccCCc-cCCCceEEEEcCCCCCchh--------------hh-hhhcccHHHHhhcCcEEEEE
Q 018952 37 ITAPRIKLRDGRHLAYKEHGVSK-ELAKYKIIFVHGFGSSRHD--------------AA-IAANLSPEVVDELGIYIVSF 100 (348)
Q Consensus 37 ~~~~~~~~~~g~~l~y~~~g~~~-~~~~~~vl~~hG~~~~~~~--------------~~-~~~~~~~~l~~~~g~~vi~~ 100 (348)
.++..+.+.++.++..+..-|.. .++-|.||++||-+++.+. +. -...+..+|++ +||-|+++
T Consensus 88 ~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk-~GYVvla~ 166 (390)
T PF12715_consen 88 REKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAK-RGYVVLAP 166 (390)
T ss_dssp EEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHT-TTSEEEEE
T ss_pred EEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHh-CCCEEEEE
Confidence 34555666677776655543433 4567899999998765422 11 00012345555 49999999
Q ss_pred cCCCCCCCCCCCc------cchhhh---------------HHHHHHHHHHhCC-----CCeEEEEEeccchHHHHHHHHH
Q 018952 101 DRPGYGESDPDPK------RTRKSL---------------ALDIEELADQLGL-----GSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 101 D~~G~G~S~~~~~------~~~~~~---------------~~di~~~l~~l~~-----~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
|.+|+|+...... ++...+ +-|....+|.|.- .++|.++|+||||..++.+|+.
T Consensus 167 D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL 246 (390)
T PF12715_consen 167 DALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL 246 (390)
T ss_dssp --TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH
T ss_pred ccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc
Confidence 9999998764321 121221 1133345555531 3799999999999999999987
Q ss_pred hhcccceeEEeccc
Q 018952 155 ISHRLTGAALIAPV 168 (348)
Q Consensus 155 ~p~~v~~~il~~~~ 168 (348)
. ++|++.|..+..
T Consensus 247 D-dRIka~v~~~~l 259 (390)
T PF12715_consen 247 D-DRIKATVANGYL 259 (390)
T ss_dssp --TT--EEEEES-B
T ss_pred c-hhhHhHhhhhhh
Confidence 4 589888877654
No 144
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.93 E-value=2.7e-08 Score=86.39 Aligned_cols=133 Identities=19% Similarity=0.185 Sum_probs=84.3
Q ss_pred ccceeecC--CCeEEEEeeccCCc-cCCCceEEEEcCCCCCchhhhhhhcccHHHHh--------------hcCcEEEEE
Q 018952 38 TAPRIKLR--DGRHLAYKEHGVSK-ELAKYKIIFVHGFGSSRHDAAIAANLSPEVVD--------------ELGIYIVSF 100 (348)
Q Consensus 38 ~~~~~~~~--~g~~l~y~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~--------------~~g~~vi~~ 100 (348)
...++.+. .+..++|+.+.... .+.+|.||++.|.++++..|..-...-+.... ..-.+++.+
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~i 91 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFI 91 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEE
Confidence 45566665 68889998886543 35679999999999988887511111111111 012689999
Q ss_pred cC-CCCCCCCCCCc----cchhhhHHHHHHHHHHh-----C-CCCeEEEEEeccchHHHHHHHHH----h------hccc
Q 018952 101 DR-PGYGESDPDPK----RTRKSLALDIEELADQL-----G-LGSKFYVVGFSMGGQVVWSCLKY----I------SHRL 159 (348)
Q Consensus 101 D~-~G~G~S~~~~~----~~~~~~~~di~~~l~~l-----~-~~~~~~lvG~S~Gg~ia~~~a~~----~------p~~v 159 (348)
|. .|.|.|..... .+.++.++|+..+|+.. . .+.+++|.|-|+||..+-.+|.. . +-.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 95 49999975433 26778888888877765 1 12599999999999987766653 2 2248
Q ss_pred ceeEEeccccc
Q 018952 160 TGAALIAPVIN 170 (348)
Q Consensus 160 ~~~il~~~~~~ 170 (348)
+|+++.++..+
T Consensus 172 kGi~IGng~~d 182 (415)
T PF00450_consen 172 KGIAIGNGWID 182 (415)
T ss_dssp EEEEEESE-SB
T ss_pred ccceecCcccc
Confidence 89999998765
No 145
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.87 E-value=4.3e-08 Score=84.44 Aligned_cols=131 Identities=15% Similarity=0.093 Sum_probs=91.0
Q ss_pred cceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhh-h-cccH---HHHhhcCcEEEEEcCCCCCCCCCCCc
Q 018952 39 APRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIA-A-NLSP---EVVDELGIYIVSFDRPGYGESDPDPK 113 (348)
Q Consensus 39 ~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~-~-~~~~---~l~~~~g~~vi~~D~~G~G~S~~~~~ 113 (348)
...+.+.||++|+..++-+.+.++.|+++..+-++-....+.+. + ...+ .++. +||.|+..|.||.|.|+..-.
T Consensus 21 ~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa-~GYavV~qDvRG~~~SeG~~~ 99 (563)
T COG2936 21 DVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAA-QGYAVVNQDVRGRGGSEGVFD 99 (563)
T ss_pred eeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeec-CceEEEEecccccccCCcccc
Confidence 45688889999999999877667788888888333322211100 0 1122 3444 499999999999999987543
Q ss_pred cchhhhHHH---HHHHHHHhCC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 114 RTRKSLALD---IEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 114 ~~~~~~~~d---i~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
....+-++| +.+++..... |.++..+|.|++|...+.+|+..|..+++++...+..+
T Consensus 100 ~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 100 PESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred eeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 211133444 4444444333 57999999999999999999998888999998887654
No 146
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.87 E-value=2.3e-08 Score=78.52 Aligned_cols=104 Identities=24% Similarity=0.447 Sum_probs=71.4
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCc--EEEEEcCCCCCCCCCC--CccchhhhHHHHHHHHHHh----CCC
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGI--YIVSFDRPGYGESDPD--PKRTRKSLALDIEELADQL----GLG 133 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~--~vi~~D~~G~G~S~~~--~~~~~~~~~~di~~~l~~l----~~~ 133 (348)
.+..+||+||+..+...-. ..+.++....++ .++.+.||+.|.-..- ...+...-..++..+++.| +.
T Consensus 17 ~~~vlvfVHGyn~~f~~a~---~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~- 92 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDAL---RRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI- 92 (233)
T ss_pred CCeEEEEEeCCCCCHHHHH---HHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC-
Confidence 4689999999999876655 444555555444 6999999988763211 1113334444555555554 44
Q ss_pred CeEEEEEeccchHHHHHHHHHh----h-----cccceeEEecccc
Q 018952 134 SKFYVVGFSMGGQVVWSCLKYI----S-----HRLTGAALIAPVI 169 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~~----p-----~~v~~~il~~~~~ 169 (348)
+++++++||||+.+.+...... + .++..+++++|-.
T Consensus 93 ~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 93 KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 7999999999999998876531 1 2678999999854
No 147
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.86 E-value=1.9e-08 Score=85.82 Aligned_cols=90 Identities=18% Similarity=0.166 Sum_probs=68.0
Q ss_pred CCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc---cchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHH
Q 018952 74 SSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK---RTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWS 150 (348)
Q Consensus 74 ~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~ 150 (348)
.....|. .+++.|.+. ||. ...|++|+|.+.+... ...+++.+.++++.+..+. ++++|+||||||.+++.
T Consensus 105 ~~~~~~~---~li~~L~~~-GY~-~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~-~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 105 DEVYYFH---DMIEQLIKW-GYK-EGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG-KKVNIISHSMGGLLVKC 178 (440)
T ss_pred chHHHHH---HHHHHHHHc-CCc-cCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC-CCEEEEEECHhHHHHHH
Confidence 4567788 888888875 874 4899999999876432 1334445555555555566 79999999999999999
Q ss_pred HHHHhhc----ccceeEEecccc
Q 018952 151 CLKYISH----RLTGAALIAPVI 169 (348)
Q Consensus 151 ~a~~~p~----~v~~~il~~~~~ 169 (348)
++..+|+ .|+++|.++++.
T Consensus 179 fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHCCHhHHhHhccEEEECCCC
Confidence 9988876 478999998764
No 148
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.84 E-value=8.8e-09 Score=83.41 Aligned_cols=91 Identities=24% Similarity=0.260 Sum_probs=64.5
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCC--CCCCCCC----cc---chhhhHHHHHHHHHHh--
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGY--GESDPDP----KR---TRKSLALDIEELADQL-- 130 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--G~S~~~~----~~---~~~~~~~di~~~l~~l-- 130 (348)
..|.|++-||.+++...+. ...+.++.. ||-|.++|.+|- |...... .+ .+.+-..|+..+++.|
T Consensus 70 ~~PlvvlshG~Gs~~~~f~---~~A~~lAs~-Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~ 145 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFA---WLAEHLASY-GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQ 145 (365)
T ss_pred cCCeEEecCCCCCCccchh---hhHHHHhhC-ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHH
Confidence 4688999999999988887 666777665 999999999994 4433211 11 2234455555555544
Q ss_pred -----------CCCCeEEEEEeccchHHHHHHHHHhhc
Q 018952 131 -----------GLGSKFYVVGFSMGGQVVWSCLKYISH 157 (348)
Q Consensus 131 -----------~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 157 (348)
.. .++.++|||+||+.++.++....+
T Consensus 146 ~~~sP~l~~~ld~-~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 146 LTASPALAGRLDP-QRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hhcCcccccccCc-cceEEEecccccHHHHHhcccccc
Confidence 22 589999999999999998875443
No 149
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.82 E-value=1e-06 Score=75.63 Aligned_cols=134 Identities=19% Similarity=0.189 Sum_probs=80.3
Q ss_pred cccceeecCC--CeEEEEeeccCCc-cCCCceEEEEcCCCCCchhhhhhhcccH-------------HHHhh-----cCc
Q 018952 37 ITAPRIKLRD--GRHLAYKEHGVSK-ELAKYKIIFVHGFGSSRHDAAIAANLSP-------------EVVDE-----LGI 95 (348)
Q Consensus 37 ~~~~~~~~~~--g~~l~y~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~~~~~-------------~l~~~-----~g~ 95 (348)
....++.+.+ +..++|+.+.+.. +.+.|.|+++.|.++.+..+....+.-+ .+... .-.
T Consensus 37 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 116 (433)
T PLN03016 37 LETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMA 116 (433)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcC
Confidence 3456666643 5778888775432 3457999999999887764421001111 11100 025
Q ss_pred EEEEEc-CCCCCCCCCCC--cc-chhhhHHHHHHHHHHh----C--CCCeEEEEEeccchHHHHHHHHHh----------
Q 018952 96 YIVSFD-RPGYGESDPDP--KR-TRKSLALDIEELADQL----G--LGSKFYVVGFSMGGQVVWSCLKYI---------- 155 (348)
Q Consensus 96 ~vi~~D-~~G~G~S~~~~--~~-~~~~~~~di~~~l~~l----~--~~~~~~lvG~S~Gg~ia~~~a~~~---------- 155 (348)
+++.+| ..|.|.|.... .. +-.+.++++..++... . .+.+++|.|.|+||..+-.+|..-
T Consensus 117 nllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~ 196 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 196 (433)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCC
Confidence 799999 66899986432 11 1112335555544432 1 136899999999999777666531
Q ss_pred hcccceeEEeccccc
Q 018952 156 SHRLTGAALIAPVIN 170 (348)
Q Consensus 156 p~~v~~~il~~~~~~ 170 (348)
+-.++|+++-+|...
T Consensus 197 ~inLkGi~iGNg~t~ 211 (433)
T PLN03016 197 PINLQGYMLGNPVTY 211 (433)
T ss_pred cccceeeEecCCCcC
Confidence 115789998887654
No 150
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.82 E-value=1.6e-07 Score=73.49 Aligned_cols=95 Identities=19% Similarity=0.273 Sum_probs=68.9
Q ss_pred EEcCCC--CCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccch
Q 018952 68 FVHGFG--SSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGG 145 (348)
Q Consensus 68 ~~hG~~--~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg 145 (348)
++|+.+ ++...|. .+...+... +.|+++|.+|++.+... ..+.+++++.+...+.......+++++|||+||
T Consensus 2 ~~~~~~~~~~~~~~~---~~~~~l~~~--~~v~~~~~~g~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg 75 (212)
T smart00824 2 CFPSTAAPSGPHEYA---RLAAALRGR--RDVSALPLPGFGPGEPL-PASADALVEAQAEAVLRAAGGRPFVLVGHSSGG 75 (212)
T ss_pred ccCCCCCCCcHHHHH---HHHHhcCCC--ccEEEecCCCCCCCCCC-CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHH
Confidence 345433 5667787 777777664 78999999999876543 236666776655554443323789999999999
Q ss_pred HHHHHHHHHh---hcccceeEEeccc
Q 018952 146 QVVWSCLKYI---SHRLTGAALIAPV 168 (348)
Q Consensus 146 ~ia~~~a~~~---p~~v~~~il~~~~ 168 (348)
.++..++.+. ++.+.+++++++.
T Consensus 76 ~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 76 LLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 9999988864 4568999988864
No 151
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.81 E-value=7.8e-09 Score=79.39 Aligned_cols=85 Identities=24% Similarity=0.333 Sum_probs=50.4
Q ss_pred ceEEEEcCCCC-CchhhhhhhcccHHHHhhcCcE---EEEEcCCCCCCCCCCCc-----cchhhhHHHHHHHHHHhCCCC
Q 018952 64 YKIIFVHGFGS-SRHDAAIAANLSPEVVDELGIY---IVSFDRPGYGESDPDPK-----RTRKSLALDIEELADQLGLGS 134 (348)
Q Consensus 64 ~~vl~~hG~~~-~~~~~~~~~~~~~~l~~~~g~~---vi~~D~~G~G~S~~~~~-----~~~~~~~~di~~~l~~l~~~~ 134 (348)
.||||+||.++ ....|. .+.+.|.++ ||. |+++++-....+..... .+..++++-|.+++++-|-
T Consensus 2 ~PVVlVHG~~~~~~~~w~---~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-- 75 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWS---TLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-- 75 (219)
T ss_dssp --EEEE--TTTTTCGGCC---HHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---
T ss_pred CCEEEECCCCcchhhCHH---HHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC--
Confidence 58999999998 678898 788888776 998 79999854433221110 1223444444555555564
Q ss_pred eEEEEEeccchHHHHHHHHH
Q 018952 135 KFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 135 ~~~lvG~S~Gg~ia~~~a~~ 154 (348)
++.||||||||.++-.+...
T Consensus 76 kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999999877754
No 152
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.81 E-value=3.7e-08 Score=73.15 Aligned_cols=101 Identities=24% Similarity=0.302 Sum_probs=73.6
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCC----CCCCCCCCccchhhhHHHHHHHHHHhCC---CCe
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPG----YGESDPDPKRTRKSLALDIEELADQLGL---GSK 135 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G----~G~S~~~~~~~~~~~~~di~~~l~~l~~---~~~ 135 (348)
+..|||+-|++..-....+-+.+...+. +.+|.++-+.++. +|.+ ++.+-++|+..+++|++. ..+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~ld-e~~wslVq~q~~Ssy~G~Gt~------slk~D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLD-ENSWSLVQPQLRSSYNGYGTF------SLKDDVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHh-hccceeeeeeccccccccccc------cccccHHHHHHHHHHhhccCcccc
Confidence 4678999999876544332223444444 4489998887763 4433 778889999999999864 258
Q ss_pred EEEEEeccchHHHHHHHHH--hhcccceeEEeccccc
Q 018952 136 FYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVIN 170 (348)
Q Consensus 136 ~~lvG~S~Gg~ia~~~a~~--~p~~v~~~il~~~~~~ 170 (348)
++|+|||.|+.-.+.|... .+..+.+.|+.+|..+
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 9999999999999888732 3557888898888743
No 153
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.78 E-value=9.5e-08 Score=75.89 Aligned_cols=124 Identities=18% Similarity=0.223 Sum_probs=81.9
Q ss_pred ccceeecCCCeEEEE---eeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCcc
Q 018952 38 TAPRIKLRDGRHLAY---KEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKR 114 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y---~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~ 114 (348)
.+-.++..||.+|-- ...+...+..+..|+++-|..+-.+. -.+..-++ .||.|+.+++||++.|...+..
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv-----G~m~tP~~-lgYsvLGwNhPGFagSTG~P~p 288 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV-----GVMNTPAQ-LGYSVLGWNHPGFAGSTGLPYP 288 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe-----eeecChHH-hCceeeccCCCCccccCCCCCc
Confidence 445567777766643 22222222234566777776654332 22233333 3899999999999999865432
Q ss_pred --chhhhHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 115 --TRKSLALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 115 --~~~~~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
+....-.-+.-.|+.|+. .+.+++.|||.||..+..+|..||+ |+++|+-++.
T Consensus 289 ~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 289 VNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred ccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 333333334455677775 3789999999999999999999996 8999988765
No 154
>PLN02606 palmitoyl-protein thioesterase
Probab=98.75 E-value=2.3e-06 Score=68.14 Aligned_cols=101 Identities=19% Similarity=0.232 Sum_probs=62.1
Q ss_pred ceEEEEcCCC--CCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhC-CCCeEEEEE
Q 018952 64 YKIIFVHGFG--SSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLG-LGSKFYVVG 140 (348)
Q Consensus 64 ~~vl~~hG~~--~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~-~~~~~~lvG 140 (348)
.|||+.||++ ++...+. .+.+.+.+..|+.+..+. .|-+.... --....++++.+.+.+.... +.+-++++|
T Consensus 27 ~PvViwHGlgD~~~~~~~~---~~~~~i~~~~~~pg~~v~-ig~~~~~s-~~~~~~~Qv~~vce~l~~~~~L~~G~naIG 101 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVS---NLTQFLINHSGYPGTCVE-IGNGVQDS-LFMPLRQQASIACEKIKQMKELSEGYNIVA 101 (306)
T ss_pred CCEEEECCCCcccCCchHH---HHHHHHHhCCCCCeEEEE-ECCCcccc-cccCHHHHHHHHHHHHhcchhhcCceEEEE
Confidence 5899999999 5555665 554544322244444443 23222110 00133444444444443321 124699999
Q ss_pred eccchHHHHHHHHHhhc--ccceeEEecccc
Q 018952 141 FSMGGQVVWSCLKYISH--RLTGAALIAPVI 169 (348)
Q Consensus 141 ~S~Gg~ia~~~a~~~p~--~v~~~il~~~~~ 169 (348)
+|.||.++-.++.+.|+ .|+.+|.+++.-
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 99999999999999987 599999998753
No 155
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.72 E-value=1.7e-05 Score=65.24 Aligned_cols=106 Identities=18% Similarity=0.161 Sum_probs=65.8
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCC--CCCCC----------CC-----c----------
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGY--GESDP----------DP-----K---------- 113 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~--G~S~~----------~~-----~---------- 113 (348)
.....||++||.+.+...-.....+-..|. ++|+.++++.+|.- ..... .. .
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~~L~-~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRRELP-DHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHHHhh-hcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 456799999999987642221113333443 45999999988871 11100 00 0
Q ss_pred ---cch----hhhHHHHHHHHHHh---CCCCeEEEEEeccchHHHHHHHHHhhc-ccceeEEeccc
Q 018952 114 ---RTR----KSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISH-RLTGAALIAPV 168 (348)
Q Consensus 114 ---~~~----~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~~il~~~~ 168 (348)
... +.+..-|.+.+..+ +. ++++|+||+.|+..+..+....+. .++++|++++.
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~~~~~-~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQQQGG-KNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 001 12222233333333 33 569999999999999999987764 59999999985
No 156
>PLN02209 serine carboxypeptidase
Probab=98.68 E-value=2.3e-05 Score=67.43 Aligned_cols=133 Identities=22% Similarity=0.243 Sum_probs=81.4
Q ss_pred ccceeecCC--CeEEEEeeccCCc-cCCCceEEEEcCCCCCchhhhhhhcccH-------------HHHhh-----cCcE
Q 018952 38 TAPRIKLRD--GRHLAYKEHGVSK-ELAKYKIIFVHGFGSSRHDAAIAANLSP-------------EVVDE-----LGIY 96 (348)
Q Consensus 38 ~~~~~~~~~--g~~l~y~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~~~~~-------------~l~~~-----~g~~ 96 (348)
...++.+.+ +..++|+.+.+.. ..+.|.++++.|.++++..+....+.-+ .+... .-.+
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 119 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTAN 119 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCc
Confidence 345566543 6778887775433 2457999999999988776631000000 11000 0257
Q ss_pred EEEEc-CCCCCCCCCCC--c-cchhhhHHHHHHHHHHh----C-C-CCeEEEEEeccchHHHHHHHHHh---h-------
Q 018952 97 IVSFD-RPGYGESDPDP--K-RTRKSLALDIEELADQL----G-L-GSKFYVVGFSMGGQVVWSCLKYI---S------- 156 (348)
Q Consensus 97 vi~~D-~~G~G~S~~~~--~-~~~~~~~~di~~~l~~l----~-~-~~~~~lvG~S~Gg~ia~~~a~~~---p------- 156 (348)
++.+| ..|.|.|.... . .+-++.++|+..+++.. . . ..+++|.|.|+||..+-.+|..- .
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 99999 56899986322 1 12234456666666543 1 1 25899999999999777666532 1
Q ss_pred cccceeEEeccccc
Q 018952 157 HRLTGAALIAPVIN 170 (348)
Q Consensus 157 ~~v~~~il~~~~~~ 170 (348)
=.++|+++.++..+
T Consensus 200 inl~Gi~igng~td 213 (437)
T PLN02209 200 INLQGYVLGNPITH 213 (437)
T ss_pred eeeeeEEecCcccC
Confidence 14789999888654
No 157
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.65 E-value=4.6e-07 Score=71.19 Aligned_cols=102 Identities=16% Similarity=0.214 Sum_probs=68.7
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCC------CCCc----------------cc----
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESD------PDPK----------------RT---- 115 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~------~~~~----------------~~---- 115 (348)
.-|.+||-||++++...|. .+.-.|+.+ ||-|.+++.|-.-.+- .+.+ ..
T Consensus 117 k~PvvvFSHGLggsRt~YS---a~c~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYS---AYCTSLASH-GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CccEEEEecccccchhhHH---HHhhhHhhC-ceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 3589999999999999999 888888886 9999999998653331 1000 00
Q ss_pred ----hhhhHHHHH---HHHHHhCC-----------------------CCeEEEEEeccchHHHHHHHHHhhcccceeEEe
Q 018952 116 ----RKSLALDIE---ELADQLGL-----------------------GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALI 165 (348)
Q Consensus 116 ----~~~~~~di~---~~l~~l~~-----------------------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~ 165 (348)
.-.-++.+. .+++.++. ..++.++|||+||..+....+.+ ..+++.|++
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~l 271 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIAL 271 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeee
Confidence 011122222 22222210 14789999999999998777664 468888888
Q ss_pred ccc
Q 018952 166 APV 168 (348)
Q Consensus 166 ~~~ 168 (348)
++.
T Consensus 272 D~W 274 (399)
T KOG3847|consen 272 DAW 274 (399)
T ss_pred eee
Confidence 875
No 158
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.56 E-value=6.1e-06 Score=70.62 Aligned_cols=118 Identities=9% Similarity=-0.059 Sum_probs=69.9
Q ss_pred CeEEEEeeccCCc--cCCCceEEEEcCCCCC--chhhhhhhcccHHHHhhc---CcEEEEEcCCCC-CCCCC-CCcc-ch
Q 018952 47 GRHLAYKEHGVSK--ELAKYKIIFVHGFGSS--RHDAAIAANLSPEVVDEL---GIYIVSFDRPGY-GESDP-DPKR-TR 116 (348)
Q Consensus 47 g~~l~y~~~g~~~--~~~~~~vl~~hG~~~~--~~~~~~~~~~~~~l~~~~---g~~vi~~D~~G~-G~S~~-~~~~-~~ 116 (348)
|.+..+.++.++. ++..|.|+++||-.-. ...+ ..+..+.++. ...++.+|..+. .++.. +... -.
T Consensus 191 g~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~----~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~ 266 (411)
T PRK10439 191 GNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVW----PALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFW 266 (411)
T ss_pred CCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHH----HHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHH
Confidence 4444455554432 2346888899995421 1111 2334444431 134677876321 11111 1111 22
Q ss_pred hhhHHHHHHHHHHh-CC---CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 117 KSLALDIEELADQL-GL---GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 117 ~~~~~di~~~l~~l-~~---~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
..+++++.-.++.. .. .++.+|+|+||||..|+.++.++|+++.+++.+++.
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 33456666666654 21 257899999999999999999999999999999986
No 159
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.53 E-value=3.3e-07 Score=76.31 Aligned_cols=100 Identities=22% Similarity=0.328 Sum_probs=77.2
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcE---EEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEE
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIY---IVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 139 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 139 (348)
.-+++++||++.+...|. .+...+.. .|+. ++.+++++- ....+.....+++..-+.+++...+. +++.++
T Consensus 59 ~~pivlVhG~~~~~~~~~---~~~~~~~~-~g~~~~~~~~~~~~~~-~~~~~~~~~~~ql~~~V~~~l~~~ga-~~v~Li 132 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFL---PLDYRLAI-LGWLTNGVYAFELSGG-DGTYSLAVRGEQLFAYVDEVLAKTGA-KKVNLI 132 (336)
T ss_pred CceEEEEccCcCCcchhh---hhhhhhcc-hHHHhccccccccccc-CCCccccccHHHHHHHHHHHHhhcCC-CceEEE
Confidence 459999999988888887 55444433 3665 888888865 22222333666777778888888888 899999
Q ss_pred EeccchHHHHHHHHHhh--cccceeEEeccc
Q 018952 140 GFSMGGQVVWSCLKYIS--HRLTGAALIAPV 168 (348)
Q Consensus 140 G~S~Gg~ia~~~a~~~p--~~v~~~il~~~~ 168 (348)
||||||..+..++...+ .+|+.++.++++
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 99999999999998887 789999999975
No 160
>COG3150 Predicted esterase [General function prediction only]
Probab=98.50 E-value=4.6e-07 Score=64.36 Aligned_cols=90 Identities=21% Similarity=0.297 Sum_probs=69.4
Q ss_pred EEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccch
Q 018952 66 IIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGG 145 (348)
Q Consensus 66 vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg 145 (348)
||++||+.+|....+ ..+... .+..|.|-.+.|.+....+..+.++.++.++..++- +...++|.|+||
T Consensus 2 ilYlHGFnSSP~shk------a~l~~q----~~~~~~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~-~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHK------AVLLLQ----FIDEDVRDIEYSTPHLPHDPQQALKELEKAVQELGD-ESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHH------HHHHHH----HHhccccceeeecCCCCCCHHHHHHHHHHHHHHcCC-CCceEEeecchH
Confidence 899999999988877 334333 244555666666665666889999999999999987 679999999999
Q ss_pred HHHHHHHHHhhcccceeEEecccc
Q 018952 146 QVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 146 ~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
+.|..++.++. ++ .|+++|..
T Consensus 71 Y~At~l~~~~G--ir-av~~NPav 91 (191)
T COG3150 71 YYATWLGFLCG--IR-AVVFNPAV 91 (191)
T ss_pred HHHHHHHHHhC--Ch-hhhcCCCc
Confidence 99999998864 33 45567754
No 161
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.50 E-value=1.8e-06 Score=75.21 Aligned_cols=107 Identities=21% Similarity=0.236 Sum_probs=72.6
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc--------cchhhhHHHHHHHHHHhC---
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK--------RTRKSLALDIEELADQLG--- 131 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--------~~~~~~~~di~~~l~~l~--- 131 (348)
+|.+|++-|=+ ..........++..++++.|-.++++++|-+|.|.+..+ .+.++..+|+..+++++.
T Consensus 29 gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 56666665543 332221111456788888888999999999999986432 277888999998888774
Q ss_pred ---CCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 132 ---LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 132 ---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
.+.|++++|-|+||.+|..+-.+||+.|.+.+.-++++.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 135899999999999999999999999999999887765
No 162
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.49 E-value=8.7e-05 Score=63.50 Aligned_cols=135 Identities=19% Similarity=0.181 Sum_probs=82.3
Q ss_pred cccceeecC--CCeEEEEeeccCCc-cCCCceEEEEcCCCCCchhhhhhhcccHHHHhhc-------------CcEEEEE
Q 018952 37 ITAPRIKLR--DGRHLAYKEHGVSK-ELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDEL-------------GIYIVSF 100 (348)
Q Consensus 37 ~~~~~~~~~--~g~~l~y~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~-------------g~~vi~~ 100 (348)
....++.+. .|..++|+...+.. +..+|.||.+.|.+|.+..-....+.-+-....- -.+++.+
T Consensus 44 ~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 44 QYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFL 123 (454)
T ss_pred cccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEE
Confidence 345677765 58999998886543 3457999999999986644320001110000000 1358888
Q ss_pred cCC-CCCCCCCCCc----cchhhhHHHHHHHHHHh----C--CCCeEEEEEeccchHHHHHHHHH----hh------ccc
Q 018952 101 DRP-GYGESDPDPK----RTRKSLALDIEELADQL----G--LGSKFYVVGFSMGGQVVWSCLKY----IS------HRL 159 (348)
Q Consensus 101 D~~-G~G~S~~~~~----~~~~~~~~di~~~l~~l----~--~~~~~~lvG~S~Gg~ia~~~a~~----~p------~~v 159 (348)
|.| |.|.|-.... .+-+..++|+..++... . .+.++++.|-|++|+..-.+|.. .. -.+
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 876 7888853221 23445556655555432 1 13689999999999877666652 21 257
Q ss_pred ceeEEecccccc
Q 018952 160 TGAALIAPVINY 171 (348)
Q Consensus 160 ~~~il~~~~~~~ 171 (348)
+|+++-+|..+.
T Consensus 204 kG~~IGNg~td~ 215 (454)
T KOG1282|consen 204 KGYAIGNGLTDP 215 (454)
T ss_pred eEEEecCcccCc
Confidence 888888887653
No 163
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.49 E-value=7.1e-07 Score=60.33 Aligned_cols=61 Identities=20% Similarity=0.320 Sum_probs=55.6
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhcccc
Q 018952 284 EGSVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGEK 344 (348)
Q Consensus 284 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~~ 344 (348)
..|+|++.++.|+.+|.+.++.+++.+++++++.+++.||..+.. ...+.+.+.+||..-+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 477999999999999999999999999999999999999999865 7888999999997543
No 164
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.43 E-value=4.1e-05 Score=63.39 Aligned_cols=105 Identities=21% Similarity=0.283 Sum_probs=67.1
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcccH------HHHhhcCcEEEEEcCCCCCCC--CCCCccchhhhHHHHHHHHHHhCC
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANLSP------EVVDELGIYIVSFDRPGYGES--DPDPKRTRKSLALDIEELADQLGL 132 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~~~------~l~~~~g~~vi~~D~~G~G~S--~~~~~~~~~~~~~di~~~l~~l~~ 132 (348)
++.|.|+++||.|-.-.... .++. .+.++ ..+++.|+--...- +..-..-+.+.++-...+++..|.
T Consensus 120 k~DpVlIYlHGGGY~l~~~p---~qi~~L~~i~~~l~~--~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~ 194 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTP---SQIEFLLNIYKLLPE--VSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGN 194 (374)
T ss_pred CCCcEEEEEcCCeeEecCCH---HHHHHHHHHHHHcCC--CeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCC
Confidence 34699999999985433332 2222 22222 46888887654300 111112455666666667766676
Q ss_pred CCeEEEEEeccchHHHHHHHHH--hhc---ccceeEEecccccc
Q 018952 133 GSKFYVVGFSMGGQVVWSCLKY--ISH---RLTGAALIAPVINY 171 (348)
Q Consensus 133 ~~~~~lvG~S~Gg~ia~~~a~~--~p~---~v~~~il~~~~~~~ 171 (348)
++++|+|-|.||.+++.+... .++ .-+++|+++|....
T Consensus 195 -~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 195 -KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred -CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 899999999999999887753 212 36899999998764
No 165
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.42 E-value=3.5e-06 Score=72.25 Aligned_cols=43 Identities=21% Similarity=0.299 Sum_probs=37.4
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHhhCC-CceEEEeCCCCccee
Q 018952 284 EGSVHLWQGDEDRLVPVILQRYISKKLP-WIRYHEIPGSGHLIA 326 (348)
Q Consensus 284 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~ 326 (348)
+.|+||+.|.+|..+++...+++++++. ..+++++.+++|.+-
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsma 347 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMA 347 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCcccc
Confidence 3349999999999999999999999884 478999999999754
No 166
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.40 E-value=1.1e-06 Score=68.47 Aligned_cols=89 Identities=20% Similarity=0.222 Sum_probs=50.0
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhh-cCcEEEEEcCCCCCCCCCCCccchh----hhHHHHHHHHHHhCCC-Ce
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDE-LGIYIVSFDRPGYGESDPDPKRTRK----SLALDIEELADQLGLG-SK 135 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~-~g~~vi~~D~~G~G~S~~~~~~~~~----~~~~di~~~l~~l~~~-~~ 135 (348)
+...|||+||+.++...|. .+...+... ..+.-..+...++.........+++ .++++|.+.++..... .+
T Consensus 3 ~~hLvV~vHGL~G~~~d~~---~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMR---YLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHHHHH---HHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhcccccccccc
Confidence 3568999999999999998 555555441 0111111222222111111112333 3444444554444441 48
Q ss_pred EEEEEeccchHHHHHHHH
Q 018952 136 FYVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 136 ~~lvG~S~Gg~ia~~~a~ 153 (348)
+.+|||||||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999965544
No 167
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.39 E-value=6e-05 Score=60.34 Aligned_cols=100 Identities=19% Similarity=0.195 Sum_probs=63.0
Q ss_pred CceEEEEcCCCCCchh--hhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCcc--chhhhHHHHHHHHHHhC-CCCeEE
Q 018952 63 KYKIIFVHGFGSSRHD--AAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKR--TRKSLALDIEELADQLG-LGSKFY 137 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~--~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~di~~~l~~l~-~~~~~~ 137 (348)
..|+|+.||+|.+... .. .+.+.+...-|..+.++.. |.+.. ..+ ...++++.+.+.+.... ..+-++
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~---~~~~l~~~~~g~~~~~i~i---g~~~~-~s~~~~~~~Qve~vce~l~~~~~l~~G~n 97 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNA---NFTQLLTNLSGSPGFCLEI---GNGVG-DSWLMPLTQQAEIACEKVKQMKELSQGYN 97 (314)
T ss_pred CCCeEEecCCCcccCCchHH---HHHHHHHhCCCCceEEEEE---CCCcc-ccceeCHHHHHHHHHHHHhhchhhhCcEE
Confidence 3589999999975442 32 2333332222555665543 33311 111 44555555555554421 124699
Q ss_pred EEEeccchHHHHHHHHHhhc--ccceeEEecccc
Q 018952 138 VVGFSMGGQVVWSCLKYISH--RLTGAALIAPVI 169 (348)
Q Consensus 138 lvG~S~Gg~ia~~~a~~~p~--~v~~~il~~~~~ 169 (348)
++|+|.||.++-.++.+.|+ .|+.+|.+++.-
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999999987 599999998753
No 168
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.38 E-value=1.2e-06 Score=70.50 Aligned_cols=122 Identities=10% Similarity=0.002 Sum_probs=71.5
Q ss_pred CeEEEEeeccCCc---cCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcC---cEEEEEcCCCCCCCC-----------
Q 018952 47 GRHLAYKEHGVSK---ELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELG---IYIVSFDRPGYGESD----------- 109 (348)
Q Consensus 47 g~~l~y~~~g~~~---~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g---~~vi~~D~~G~G~S~----------- 109 (348)
|....+.++-|+. .+.-|+|+++||.......+.. ...+..+.++.+ .-+++++..+.+...
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~-~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~ 83 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNA-QEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSR 83 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHH-HHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTC
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchH-HHHHHHHHHhCCCCceEEEEEeccccccccccccccccccc
Confidence 3444455553332 2345888999997332222321 023333444321 346667765554110
Q ss_pred CCCc----cch-hhhHHHHHHHHHHh-CCC-CeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 110 PDPK----RTR-KSLALDIEELADQL-GLG-SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 110 ~~~~----~~~-~~~~~di~~~l~~l-~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
.... ..+ +-+.++|...++.- ... ++..++|+||||..|+.++.++|+.+.+++.++|..
T Consensus 84 ~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 84 RADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp BCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred ccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 0000 122 33455666666543 331 238999999999999999999999999999999864
No 169
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.37 E-value=3.3e-06 Score=62.54 Aligned_cols=122 Identities=13% Similarity=0.176 Sum_probs=77.9
Q ss_pred CeEEEEeeccCCcc---CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcC--CCC---CCCCCC-----C-
Q 018952 47 GRHLAYKEHGVSKE---LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDR--PGY---GESDPD-----P- 112 (348)
Q Consensus 47 g~~l~y~~~g~~~~---~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~--~G~---G~S~~~-----~- 112 (348)
+..+.+-++-++.. +.-|++.++.|+.++...+-.. ..+.+.+.++|+.|+.+|- ||. |+++.- .
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~K-sg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAG 103 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEK-SGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAG 103 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhh-hhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCce
Confidence 44555655555432 2347888999999987766411 3455667778999999994 554 222210 0
Q ss_pred ------------ccc-hhhhHHHHHHHHHHh----CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 113 ------------KRT-RKSLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 113 ------------~~~-~~~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
.|. ++-.++.+.++++.- .. .++.+.||||||.=|+..+.+.|++.+++-..+|..+
T Consensus 104 FYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~-~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 104 FYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDP-LKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred eEEecccchHhhhhhHHHHHHHHHHHHhccccccccc-hhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 011 122233444444421 23 5799999999999999999999999888887777654
No 170
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.35 E-value=2.1e-05 Score=62.70 Aligned_cols=57 Identities=11% Similarity=-0.007 Sum_probs=48.2
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHhhCC----CceEEEeCCCCcceee-C-cchHHHHHHHHh
Q 018952 284 EGSVHLWQGDEDRLVPVILQRYISKKLP----WIRYHEIPGSGHLIAD-A-DGMTEAIIKALL 340 (348)
Q Consensus 284 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl 340 (348)
++|-++++++.|.+++.+..++.++... +++...++++.|..|. + |++..+.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3569999999999999998887776552 3788889999999998 4 999999999884
No 171
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.35 E-value=3e-05 Score=59.70 Aligned_cols=57 Identities=19% Similarity=0.149 Sum_probs=49.3
Q ss_pred EEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceee-C-cchHHHHHHHHhcccc
Q 018952 287 VHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIAD-A-DGMTEAIIKALLLGEK 344 (348)
Q Consensus 287 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl~~~~ 344 (348)
++++.+++|..+|......+++..|++++..++ +||.... - -+.+...|.+-|++.+
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 788899999999999999999999999999998 6997655 3 7888888988887654
No 172
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.35 E-value=1.1e-05 Score=61.39 Aligned_cols=79 Identities=23% Similarity=0.300 Sum_probs=53.6
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcE-EEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEe
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIY-IVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGF 141 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~ 141 (348)
+..|||..|||++...+. ++.. .. +++ ++++|+|..- .+ . +.-+. ++++|||+
T Consensus 11 ~~LilfF~GWg~d~~~f~---hL~~--~~--~~D~l~~yDYr~l~---------~d-----~----~~~~y-~~i~lvAW 64 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFS---HLIL--PE--NYDVLICYDYRDLD---------FD-----F----DLSGY-REIYLVAW 64 (213)
T ss_pred CeEEEEEecCCCChHHhh---hccC--CC--CccEEEEecCcccc---------cc-----c----ccccC-ceEEEEEE
Confidence 468999999999998887 5431 12 344 5678888431 11 1 11234 79999999
Q ss_pred ccchHHHHHHHHHhhcccceeEEecccc
Q 018952 142 SMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 142 S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
|||-.+|..+.... .++..+.+++..
T Consensus 65 SmGVw~A~~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 65 SMGVWAANRVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred eHHHHHHHHHhccC--CcceeEEEECCC
Confidence 99999998876543 367777777653
No 173
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.31 E-value=5.2e-06 Score=65.67 Aligned_cols=103 Identities=17% Similarity=0.267 Sum_probs=53.7
Q ss_pred CCceEEEEcCCCCCc---hhhhhhhcccHHHHhhc-CcEEEEEcCCCCCCC-CCCCc--cchhhhHHHHHHHHHHhC-CC
Q 018952 62 AKYKIIFVHGFGSSR---HDAAIAANLSPEVVDEL-GIYIVSFDRPGYGES-DPDPK--RTRKSLALDIEELADQLG-LG 133 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~---~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S-~~~~~--~~~~~~~~di~~~l~~l~-~~ 133 (348)
+..|||+.||+|.+. ..+. .+...+.+.. |-.|..++.- -+.+ +.... ....+.++.+.+.++... +.
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~---~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~ 79 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMG---SIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELA 79 (279)
T ss_dssp SS--EEEE--TT--S--TTTHH---HHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGT
T ss_pred CCCcEEEEEcCccccCChhHHH---HHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhh
Confidence 356899999999753 3444 2222222222 6667777762 2211 10001 134555556666555432 22
Q ss_pred CeEEEEEeccchHHHHHHHHHhhc-ccceeEEeccc
Q 018952 134 SKFYVVGFSMGGQVVWSCLKYISH-RLTGAALIAPV 168 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~~il~~~~ 168 (348)
+-++++|+|.||.++-.++.+.|+ .|+.+|.+++.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 579999999999999999999875 69999999875
No 174
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.29 E-value=3.8e-06 Score=72.18 Aligned_cols=134 Identities=19% Similarity=0.202 Sum_probs=87.2
Q ss_pred CCCCcccceeecCCCeEEEEeeccCC-ccCCCceEEEEcCCCCCch--hhhhhhcccHHHHhhcCcEEEEEcCCCCCCCC
Q 018952 33 GGPAITAPRIKLRDGRHLAYKEHGVS-KELAKYKIIFVHGFGSSRH--DAAIAANLSPEVVDELGIYIVSFDRPGYGESD 109 (348)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~y~~~g~~-~~~~~~~vl~~hG~~~~~~--~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~ 109 (348)
.+...++......||++|.|.+.++. +.+++|++|+--|...-+. .|. ......+++ |...+..+.||=|+=.
T Consensus 390 ~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs---~~~~~WLer-Gg~~v~ANIRGGGEfG 465 (648)
T COG1505 390 DNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFS---GSRKLWLER-GGVFVLANIRGGGEFG 465 (648)
T ss_pred cCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccc---hhhHHHHhc-CCeEEEEecccCCccC
Confidence 34445666677779999999888632 2235787777665443222 233 444445555 7778888999977654
Q ss_pred CC---C--ccchhhhHHHHHHHHHHh---CC--CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 110 PD---P--KRTRKSLALDIEELADQL---GL--GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 110 ~~---~--~~~~~~~~~di~~~l~~l---~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
+. . ..+-....+|..++.+.| |+ .+++.+.|-|-||.+.-....++|+.+.++++--|..+
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllD 536 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLD 536 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhh
Confidence 21 1 112233344444444444 33 36899999999999998888899999999998887654
No 175
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.24 E-value=7.1e-06 Score=66.41 Aligned_cols=105 Identities=26% Similarity=0.407 Sum_probs=66.1
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcC--cEEEEEcCCCCCCCCCCC--ccchhhhHHHHHHHHHHh----CCC
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELG--IYIVSFDRPGYGESDPDP--KRTRKSLALDIEELADQL----GLG 133 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g--~~vi~~D~~G~G~S~~~~--~~~~~~~~~di~~~l~~l----~~~ 133 (348)
.+..+||+||++.+-..-- .-..+.....| ...+.+.||.-|.--.-. ..+...-..+++.++..| ..
T Consensus 115 ~k~vlvFvHGfNntf~dav---~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~- 190 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAV---YRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV- 190 (377)
T ss_pred CCeEEEEEcccCCchhHHH---HHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC-
Confidence 4678999999997654433 11233333333 457888898766532111 113333444455555544 55
Q ss_pred CeEEEEEeccchHHHHHHHHH--------hhcccceeEEeccccc
Q 018952 134 SKFYVVGFSMGGQVVWSCLKY--------ISHRLTGAALIAPVIN 170 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~--------~p~~v~~~il~~~~~~ 170 (348)
++++|++||||.+++++...+ .+.+++-+|+-+|-.+
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 799999999999999887653 2346888888887543
No 176
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.19 E-value=9.2e-05 Score=61.00 Aligned_cols=108 Identities=24% Similarity=0.167 Sum_probs=81.2
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc----------c-chhhhHHHHHHHHHHhCC
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK----------R-TRKSLALDIEELADQLGL 132 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----------~-~~~~~~~di~~~l~~l~~ 132 (348)
.||+|--|.-++-+.+....-++-+++.+.+--+|..+.|-+|+|-+-.. | +.++...|...++.+++-
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 68999999887765554222345556666677799999999999975221 1 556677777777777742
Q ss_pred -----CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccc
Q 018952 133 -----GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 171 (348)
Q Consensus 133 -----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~ 171 (348)
..+++.+|.|+||+++..+=.+||+.|.|...-+++.-+
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl~ 204 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVLY 204 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceEe
Confidence 268999999999999999999999999888877765544
No 177
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.18 E-value=4e-05 Score=68.07 Aligned_cols=121 Identities=16% Similarity=0.184 Sum_probs=71.1
Q ss_pred ecCCCeEEEEeeccCCc------cCCCceEEEEcCCCCCchhhhhhhcccHHHHh--------h-------cCcEEEEEc
Q 018952 43 KLRDGRHLAYKEHGVSK------ELAKYKIIFVHGFGSSRHDAAIAANLSPEVVD--------E-------LGIYIVSFD 101 (348)
Q Consensus 43 ~~~~g~~l~y~~~g~~~------~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~--------~-------~g~~vi~~D 101 (348)
...+-+.++.+..|... +-++-||+|++|..|+...-+ .++..-.. + ..|+..++|
T Consensus 63 ~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvR---SiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVD 139 (973)
T KOG3724|consen 63 PQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVR---SIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVD 139 (973)
T ss_pred CCCCceEEEEecccccccccccccCCCceEEEecCCCCchHHHH---HHHHHHhhhhcCCchhhhhcccCccccceEEEc
Confidence 33455556554444322 235789999999999877666 33332221 0 136677777
Q ss_pred CCCCCCCCCCCccchhhhHHHHHHHHHHh-----C-------CCCeEEEEEeccchHHHHHHHHH---hhcccceeEEec
Q 018952 102 RPGYGESDPDPKRTRKSLALDIEELADQL-----G-------LGSKFYVVGFSMGGQVVWSCLKY---ISHRLTGAALIA 166 (348)
Q Consensus 102 ~~G~G~S~~~~~~~~~~~~~di~~~l~~l-----~-------~~~~~~lvG~S~Gg~ia~~~a~~---~p~~v~~~il~~ 166 (348)
+-+-= ..-.+.+..++++-+.+.|+.+ + .++.++++||||||.+|...+.. .++.|.-++..+
T Consensus 140 FnEe~--tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 140 FNEEF--TAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred ccchh--hhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 65310 0011236667776666665543 2 12469999999999999876652 234566666666
Q ss_pred cc
Q 018952 167 PV 168 (348)
Q Consensus 167 ~~ 168 (348)
++
T Consensus 218 sP 219 (973)
T KOG3724|consen 218 SP 219 (973)
T ss_pred Cc
Confidence 53
No 178
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.13 E-value=1.5e-05 Score=70.99 Aligned_cols=108 Identities=16% Similarity=0.115 Sum_probs=65.9
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcC-cEEEEEcCC-C---CCCCCC---CCccchhhhHHH---HHHHHHH
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELG-IYIVSFDRP-G---YGESDP---DPKRTRKSLALD---IEELADQ 129 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g-~~vi~~D~~-G---~G~S~~---~~~~~~~~~~~d---i~~~l~~ 129 (348)
+..|.||++||.+-....-.. .....+....+ +.|+.+++| | +..+.. +.+..+.|.... +.+-++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~--~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSL--YPGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCC--CChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 456899999997532111110 12244555444 899999999 3 332221 112233444333 3333444
Q ss_pred hCC-CCeEEEEEeccchHHHHHHHHH--hhcccceeEEeccccc
Q 018952 130 LGL-GSKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVIN 170 (348)
Q Consensus 130 l~~-~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~~il~~~~~~ 170 (348)
.|. .+++.++|+|.||..+..++.. .+..++++|++++...
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 443 3799999999999999887765 3457999999987654
No 179
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.03 E-value=0.0001 Score=64.19 Aligned_cols=130 Identities=15% Similarity=0.127 Sum_probs=85.7
Q ss_pred cccceeecCCCeEEEEeeccC---CccCCCceEEEEcCCCCCch--hhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCC-
Q 018952 37 ITAPRIKLRDGRHLAYKEHGV---SKELAKYKIIFVHGFGSSRH--DAAIAANLSPEVVDELGIYIVSFDRPGYGESDP- 110 (348)
Q Consensus 37 ~~~~~~~~~~g~~l~y~~~g~---~~~~~~~~vl~~hG~~~~~~--~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~- 110 (348)
.++..+...||..+...+.-+ ...+++|.+|..+|.-+-+. .|. .--..|.+ +|+-....|.||=|.-..
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~---~srl~lld-~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFR---ASRLSLLD-RGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred EEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccc---cceeEEEe-cceEEEEEeeccCcccccc
Confidence 456677788997765433322 22346788888877554322 233 22223444 588888889999765432
Q ss_pred --CC------ccchhhhHHHHHHHHHHhC-CCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 111 --DP------KRTRKSLALDIEELADQLG-LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 111 --~~------~~~~~~~~~di~~~l~~l~-~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
.. ..+++|+..-.+.+++.-- ..++..+.|.|.||.++..++-.+|+.+.++|+--|..+
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 11 1266666666666655321 137899999999999999999999999999998888754
No 180
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.02 E-value=0.00074 Score=56.38 Aligned_cols=36 Identities=19% Similarity=0.193 Sum_probs=31.8
Q ss_pred CeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 134 SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
-+++++|+|.||++|...|.-.|..+++++=-++..
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 389999999999999999999999999988777654
No 181
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.94 E-value=5.8e-06 Score=68.37 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=47.5
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHhhCCC--ceEEEeCCCCcceeeC--cc--hHHHHHHHHhccc
Q 018952 285 GSVHLWQGDEDRLVPVILQRYISKKLPW--IRYHEIPGSGHLIADA--DG--MTEAIIKALLLGE 343 (348)
Q Consensus 285 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e--p~--~~~~~i~~fl~~~ 343 (348)
+|+++++|++|..+|...+..+.+..+. .+...+++++|..... +. +..+.+.+|+.+.
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 5699999999999999999998888765 5788889999998863 32 5667777777653
No 182
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.92 E-value=6.3e-05 Score=63.78 Aligned_cols=118 Identities=15% Similarity=0.139 Sum_probs=71.8
Q ss_pred EEEeeccCC-ccCCCceEEEEcCCC---CCchhhhhhhcccHHHHhhcCcEEEEEcCC-C-CCCCCC---C--C----cc
Q 018952 50 LAYKEHGVS-KELAKYKIIFVHGFG---SSRHDAAIAANLSPEVVDELGIYIVSFDRP-G-YGESDP---D--P----KR 114 (348)
Q Consensus 50 l~y~~~g~~-~~~~~~~vl~~hG~~---~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~-G-~G~S~~---~--~----~~ 114 (348)
++..++-+. ..++.|+||+|||.+ ++...-. .--..|+++.++-|+++++| | +|.=+. . . +.
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~---ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPL---YDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCcccc---cChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 444445444 345579999999976 2333312 23456777644889999987 1 222111 1 1 11
Q ss_pred chhhhHH---HHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHH--hhcccceeEEeccccc
Q 018952 115 TRKSLAL---DIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVIN 170 (348)
Q Consensus 115 ~~~~~~~---di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~~il~~~~~~ 170 (348)
.+.|++. .+.+-|++.|- .++|.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 3334333 34455555553 3789999999999988777653 2347888999988653
No 183
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.89 E-value=0.00024 Score=55.14 Aligned_cols=98 Identities=21% Similarity=0.279 Sum_probs=66.2
Q ss_pred ceEEEEcCCCCCchh--hhhhhcccHHHHhhcCcEEEEEcCCCCC--CCCCCCccchhhhHHHHHHHHHHhC-CCCeEEE
Q 018952 64 YKIIFVHGFGSSRHD--AAIAANLSPEVVDELGIYIVSFDRPGYG--ESDPDPKRTRKSLALDIEELADQLG-LGSKFYV 138 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~--~~~~~~~~~~l~~~~g~~vi~~D~~G~G--~S~~~~~~~~~~~~~di~~~l~~l~-~~~~~~l 138 (348)
.|+|++||++.+... .. .+.+.+.+.-|..|++.|. |-| .|.- ....++++.+.+.++... ..+-+++
T Consensus 24 ~P~ii~HGigd~c~~~~~~---~~~q~l~~~~g~~v~~lei-g~g~~~s~l---~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMA---NLTQLLEELPGSPVYCLEI-GDGIKDSSL---MPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHH---HHHHHHHhCCCCeeEEEEe-cCCcchhhh---ccHHHHHHHHHHHHhcchhccCceEE
Confidence 579999999987665 55 5556666655788888886 333 2211 134444544444444221 2356899
Q ss_pred EEeccchHHHHHHHHHhhc-ccceeEEeccc
Q 018952 139 VGFSMGGQVVWSCLKYISH-RLTGAALIAPV 168 (348)
Q Consensus 139 vG~S~Gg~ia~~~a~~~p~-~v~~~il~~~~ 168 (348)
+|.|.||.++-.++...++ .|+.+|.+++.
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999999999887654 68999988864
No 184
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.83 E-value=0.00014 Score=65.62 Aligned_cols=105 Identities=15% Similarity=0.113 Sum_probs=60.9
Q ss_pred CCceEEEEcCCCC---CchhhhhhhcccHHHHhhcCcEEEEEcCC----CCCCCC---CC-CccchhhhHHHHHHHHHHh
Q 018952 62 AKYKIIFVHGFGS---SRHDAAIAANLSPEVVDELGIYIVSFDRP----GYGESD---PD-PKRTRKSLALDIEELADQL 130 (348)
Q Consensus 62 ~~~~vl~~hG~~~---~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~G~S~---~~-~~~~~~~~~~di~~~l~~l 130 (348)
..|++|+|||.+. +..... .....++...+.-||++.+| |+-.+. .+ .++.+.|+...++=+-+.+
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~---~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI 200 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPP---YDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNI 200 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGG---GHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHG
T ss_pred ccceEEEeecccccCCCccccc---ccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhh
Confidence 3599999999763 231111 22345555568999999998 332222 12 3345555555544444443
Q ss_pred ---CC-CCeEEEEEeccchHHHHHHHHH--hhcccceeEEecccc
Q 018952 131 ---GL-GSKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVI 169 (348)
Q Consensus 131 ---~~-~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~~il~~~~~ 169 (348)
|- .++|.|+|||.||..+..++.. ....++++|+.++..
T Consensus 201 ~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 201 AAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 32 3789999999999988776664 235799999999854
No 185
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.77 E-value=8.5e-05 Score=63.47 Aligned_cols=111 Identities=17% Similarity=0.231 Sum_probs=68.6
Q ss_pred eecCCCeEEEEeeccCCccCCCceEEEEc-CCCCCchhhhhhhcccHHHHhhcCcE-----EEE-EcCCCCCCCCCCCcc
Q 018952 42 IKLRDGRHLAYKEHGVSKELAKYKIIFVH-GFGSSRHDAAIAANLSPEVVDELGIY-----IVS-FDRPGYGESDPDPKR 114 (348)
Q Consensus 42 ~~~~~g~~l~y~~~g~~~~~~~~~vl~~h-G~~~~~~~~~~~~~~~~~l~~~~g~~-----vi~-~D~~G~G~S~~~~~~ 114 (348)
....+|..+..-.+|... .|-.+- ........|. .+++.|.+. ||. ..+ +|+|---.
T Consensus 34 ~~~~~gv~i~~~~~g~~~-----~i~~ld~~~~~~~~~~~---~li~~L~~~-GY~~~~~l~~~pYDWR~~~~------- 97 (389)
T PF02450_consen 34 YSNDPGVEIRVPGFGGTS-----GIEYLDPSFITGYWYFA---KLIENLEKL-GYDRGKDLFAAPYDWRLSPA------- 97 (389)
T ss_pred eecCCCceeecCCCCcee-----eeeecccccccccchHH---HHHHHHHhc-CcccCCEEEEEeechhhchh-------
Confidence 344466666665555211 222221 1112222788 888888763 664 223 78873211
Q ss_pred chhhhHHHHHHHHHHh---CCCCeEEEEEeccchHHHHHHHHHhhc------ccceeEEecccc
Q 018952 115 TRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVWSCLKYISH------RLTGAALIAPVI 169 (348)
Q Consensus 115 ~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~------~v~~~il~~~~~ 169 (348)
..+++...+...++.. . ++|++||||||||.++..+....+. .|+++|.++++.
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 3345555666666544 3 5899999999999999998887642 599999999764
No 186
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.74 E-value=9e-05 Score=44.47 Aligned_cols=47 Identities=21% Similarity=0.239 Sum_probs=28.7
Q ss_pred CCCcccceeecCCCeEEEEeeccCCc-----cCCCceEEEEcCCCCCchhhh
Q 018952 34 GPAITAPRIKLRDGRHLAYKEHGVSK-----ELAKYKIIFVHGFGSSRHDAA 80 (348)
Q Consensus 34 ~~~~~~~~~~~~~g~~l~y~~~g~~~-----~~~~~~vl~~hG~~~~~~~~~ 80 (348)
+-+.|+..+.+.||.-+.......+. ...+|+|++.||+.+++..|-
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 44668999999999998876664332 245799999999999999985
No 187
>COG0627 Predicted esterase [General function prediction only]
Probab=97.72 E-value=0.00022 Score=58.42 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=68.6
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcC--C------------CCCCCCC-----C---Cc-cchhh
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDR--P------------GYGESDP-----D---PK-RTRKS 118 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~--~------------G~G~S~~-----~---~~-~~~~~ 118 (348)
+-|+++++||..++...|... .-++...+..|+.++++|- + |-+.|-- + .. +.+++
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~-~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLL-DGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCEEEEeCCCCCCCCceEec-cchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 346778888888875443200 3356666666777777632 2 3222210 0 01 23333
Q ss_pred -hHHHHHHHHH-HhCCCC---eEEEEEeccchHHHHHHHHHhhcccceeEEecccccc
Q 018952 119 -LALDIEELAD-QLGLGS---KFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 171 (348)
Q Consensus 119 -~~~di~~~l~-~l~~~~---~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~ 171 (348)
+.+++-..++ +..... +..++||||||.=|+.+|+++|++++.+...++....
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 2444553333 333222 7899999999999999999999999999999987653
No 188
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.71 E-value=0.00028 Score=59.83 Aligned_cols=109 Identities=14% Similarity=0.133 Sum_probs=84.5
Q ss_pred CCceEEEEcCCCCCchhhhhh-hcccHHHHhhcCcEEEEEcCCCCCCCCCCCc--------cchhhhHHHHHHHHHHhCC
Q 018952 62 AKYKIIFVHGFGSSRHDAAIA-ANLSPEVVDELGIYIVSFDRPGYGESDPDPK--------RTRKSLALDIEELADQLGL 132 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~-~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~--------~~~~~~~~di~~~l~~l~~ 132 (348)
.+|..|+|-|=+.-...|-.. ......++++.|-.|+..++|-+|.|.+..+ -+..+...|+..+|++++.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 468888888876655555211 0234567788899999999999999975432 1678888999999998853
Q ss_pred ------CCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 133 ------GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 133 ------~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
+.+++.+|-|+-|.++..+=.++|+.+.|.|.-+++..
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 23899999999999999999999999999888777654
No 189
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.70 E-value=0.0027 Score=56.08 Aligned_cols=125 Identities=14% Similarity=0.109 Sum_probs=82.0
Q ss_pred eecCCCeEEEEeeccC---CccCCCceEEEEcCCCCCch--hhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCC-----
Q 018952 42 IKLRDGRHLAYKEHGV---SKELAKYKIIFVHGFGSSRH--DAAIAANLSPEVVDELGIYIVSFDRPGYGESDPD----- 111 (348)
Q Consensus 42 ~~~~~g~~l~y~~~g~---~~~~~~~~vl~~hG~~~~~~--~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~----- 111 (348)
....||..+-....-. ..+.++|.+|..-|.-+... .|. ...-.|.++ ||-.....-||=|.=...
T Consensus 424 a~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs---~~~lSLlDR-GfiyAIAHVRGGgelG~~WYe~G 499 (682)
T COG1770 424 ATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFS---IARLSLLDR-GFVYAIAHVRGGGELGRAWYEDG 499 (682)
T ss_pred EEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcc---cceeeeecC-ceEEEEEEeecccccChHHHHhh
Confidence 3336887765533322 12345677777776544332 222 233345554 886555667886554321
Q ss_pred ----CccchhhhHHHHHHHHHHh-CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 112 ----PKRTRKSLALDIEELADQL-GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 112 ----~~~~~~~~~~di~~~l~~l-~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
...++.|+.+....+++.= +-.+.++++|-|.||++.-..+...|+.++++|+-.|..+
T Consensus 500 K~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 500 KLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred hhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 1237778877777777643 2236899999999999999999999999999999998765
No 190
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.65 E-value=0.003 Score=52.57 Aligned_cols=59 Identities=19% Similarity=0.282 Sum_probs=47.5
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHhhCC------------------------C-ceEEEeCCCCcceeeCcchHHHHHHHH
Q 018952 285 GSVHLWQGDEDRLVPVILQRYISKKLP------------------------W-IRYHEIPGSGHLIADADGMTEAIIKAL 339 (348)
Q Consensus 285 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~ep~~~~~~i~~f 339 (348)
++||+..|+.|.+|+.-..+.+.+.+. + .++.++.++||++..+|+...+.+..|
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~f 313 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQRW 313 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHHH
Confidence 679999999999999877776666542 2 466677799999964499999999999
Q ss_pred hccc
Q 018952 340 LLGE 343 (348)
Q Consensus 340 l~~~ 343 (348)
+...
T Consensus 314 i~~~ 317 (319)
T PLN02213 314 ISGQ 317 (319)
T ss_pred HcCC
Confidence 9764
No 191
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.65 E-value=0.0019 Score=51.50 Aligned_cols=105 Identities=12% Similarity=0.004 Sum_probs=61.5
Q ss_pred CCCceEEEEcCCC--CCchhhhhhhcccHHHHhhc---CcEEEEEcCCCCC---CCCCCCccchhhhHHHHHHHHHHh--
Q 018952 61 LAKYKIIFVHGFG--SSRHDAAIAANLSPEVVDEL---GIYIVSFDRPGYG---ESDPDPKRTRKSLALDIEELADQL-- 130 (348)
Q Consensus 61 ~~~~~vl~~hG~~--~~~~~~~~~~~~~~~l~~~~---g~~vi~~D~~G~G---~S~~~~~~~~~~~~~di~~~l~~l-- 130 (348)
...|.+++.||-. .+...+. +++.+..+. .-.++.+|.--.- ..-.........+++++.=.++..
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~----~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPR----ILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccccEEEEeccHHHHhcCChHH----HHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCc
Confidence 3468889999733 3333443 445555542 2345555543200 000011112333344444344332
Q ss_pred --CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 131 --GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 131 --~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
.....-+|.|.|+||.+++..+..||+.+-.++.-+|..
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 122457899999999999999999999999999999864
No 192
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.65 E-value=0.00077 Score=56.27 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=46.3
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHhhCCC-ceEEEeCCCCcceeeCcchHHHHHHHHhcc
Q 018952 284 EGSVHLWQGDEDRLVPVILQRYISKKLPW-IRYHEIPGSGHLIADADGMTEAIIKALLLG 342 (348)
Q Consensus 284 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ep~~~~~~i~~fl~~ 342 (348)
+.|.++|.|..|++..++.+..+.+.+|+ ..+..+|+++|.... ..+.+.+..|+..
T Consensus 262 ~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 262 TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFYNR 319 (367)
T ss_pred CccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHHHH
Confidence 44499999999999999999999999986 578888999999877 4455556666544
No 193
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.49 E-value=0.0023 Score=50.53 Aligned_cols=109 Identities=9% Similarity=-0.062 Sum_probs=73.7
Q ss_pred CCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCC-CccchhhhHHHHHHHHHHhCCCCe
Q 018952 57 VSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPD-PKRTRKSLALDIEELADQLGLGSK 135 (348)
Q Consensus 57 ~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~-~~~~~~~~~~di~~~l~~l~~~~~ 135 (348)
+....+.|.||++-...++.....- ...+.|+.. ..|+.-|+-.--.-.-. ...+++|+.+-+.+++..+|. .
T Consensus 97 ~~~r~pdPkvLivapmsGH~aTLLR--~TV~alLp~--~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp--~ 170 (415)
T COG4553 97 PDARKPDPKVLIVAPMSGHYATLLR--GTVEALLPY--HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGP--D 170 (415)
T ss_pred ccccCCCCeEEEEecccccHHHHHH--HHHHHhccc--cceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCC--C
Confidence 3334456788888888776554330 455666665 45888888643222111 135889999999999999997 4
Q ss_pred EEEEEeccchHHHHH-----HHHHhhcccceeEEecccccc
Q 018952 136 FYVVGFSMGGQVVWS-----CLKYISHRLTGAALIAPVINY 171 (348)
Q Consensus 136 ~~lvG~S~Gg~ia~~-----~a~~~p~~v~~~il~~~~~~~ 171 (348)
.++++.|.-+.-.+. -+...|..-.+++++++..+.
T Consensus 171 ~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 171 AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 889999987654443 333456678899999987653
No 194
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.44 E-value=0.0046 Score=46.06 Aligned_cols=117 Identities=20% Similarity=0.176 Sum_probs=69.5
Q ss_pred EEeeccCCccCCCceEEEEcCCCCCchhhhh-----hhcccHHHHh---h--cCcEEEEEcCCCCCCCC-----CCCccc
Q 018952 51 AYKEHGVSKELAKYKIIFVHGFGSSRHDAAI-----AANLSPEVVD---E--LGIYIVSFDRPGYGESD-----PDPKRT 115 (348)
Q Consensus 51 ~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~-----~~~~~~~l~~---~--~g~~vi~~D~~G~G~S~-----~~~~~~ 115 (348)
.....|+++ ..+...++++|.+.+.....- ...+...+.+ . .+=.+-++-|.||-.-. ......
T Consensus 8 aava~GD~d-~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~ 86 (177)
T PF06259_consen 8 AAVAVGDPD-TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGY 86 (177)
T ss_pred EEEEECCcC-CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchH
Confidence 345567765 456788999999876433210 0001111111 1 12245555555553221 111113
Q ss_pred hhhhHHHHHHHHHHhC----CCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 116 RKSLALDIEELADQLG----LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 116 ~~~~~~di~~~l~~l~----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
-+.-+.++..+++.|. .+.++.++|||+|+.++-..+...+..++.+++++++
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 3455666777776663 2358999999999999988887767789999999874
No 195
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.43 E-value=0.0017 Score=48.71 Aligned_cols=106 Identities=16% Similarity=0.199 Sum_probs=62.4
Q ss_pred CCceEEEEcCCCCC-chhhhhh------------hcccHHHHhhcCcEEEEEcCCC---CCCCCC-CCcc--chhhhHHH
Q 018952 62 AKYKIIFVHGFGSS-RHDAAIA------------ANLSPEVVDELGIYIVSFDRPG---YGESDP-DPKR--TRKSLALD 122 (348)
Q Consensus 62 ~~~~vl~~hG~~~~-~~~~~~~------------~~~~~~l~~~~g~~vi~~D~~G---~G~S~~-~~~~--~~~~~~~d 122 (348)
++..+|+|||.|-- ...|.-. .+++.+..+ .||.|+..+.-- +-.+.. +..+ +..+.+.-
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~-~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVA-EGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHH-cCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 45689999998842 3445300 022233233 389898886531 111211 1111 22222222
Q ss_pred H-HHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhc--ccceeEEecccc
Q 018952 123 I-EELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALIAPVI 169 (348)
Q Consensus 123 i-~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~~il~~~~~ 169 (348)
+ ..++.-... +.+.++.||.||...+.+..+.|+ +|.++.+.++..
T Consensus 179 vw~~~v~pa~~-~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 179 VWKNIVLPAKA-ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHhcccCc-ceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 2 222223344 789999999999999999999885 677888877653
No 196
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.34 E-value=0.00078 Score=49.55 Aligned_cols=51 Identities=25% Similarity=0.189 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHHHh----CCCCeEEEEEeccchHHHHHHHHHhhc----ccceeEEeccc
Q 018952 117 KSLALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISH----RLTGAALIAPV 168 (348)
Q Consensus 117 ~~~~~di~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~~il~~~~ 168 (348)
....+.+...++.. .. .+++++|||+||.+|..++...+. ....++..+++
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~-~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPD-YKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCC-CeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 33444555555443 34 799999999999999999987754 56667777765
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.33 E-value=0.0034 Score=49.36 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=33.8
Q ss_pred CeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 134 SKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
++-.++|||+||.+++.....+|+.+...++++|+.
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 568999999999999999999999999999999974
No 198
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.24 E-value=0.0019 Score=55.25 Aligned_cols=114 Identities=18% Similarity=0.163 Sum_probs=73.3
Q ss_pred EEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccH-------------------HHHhhcCcEEEEEc-CCCCCCCCC
Q 018952 51 AYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSP-------------------EVVDELGIYIVSFD-RPGYGESDP 110 (348)
Q Consensus 51 ~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~-------------------~l~~~~g~~vi~~D-~~G~G~S~~ 110 (348)
+|...++.++.++|.++++.|.+|++..|. .+.+ .+... -.++-+| .-|.|.|..
T Consensus 89 fy~fe~~ndp~~rPvi~wlNGGPGcSS~~g---~l~elGP~rI~~~~~P~~~~NP~SW~~~--adLvFiDqPvGTGfS~a 163 (498)
T COG2939 89 FYTFESPNDPANRPVIFWLNGGPGCSSVTG---LLGELGPKRIQSGTSPSYPDNPGSWLDF--ADLVFIDQPVGTGFSRA 163 (498)
T ss_pred EEEecCCCCCCCCceEEEecCCCChHhhhh---hhhhcCCeeeeCCCCCCCCCCccccccC--CceEEEecCcccCcccc
Confidence 344444444456899999999999988886 3311 11111 3588899 668999974
Q ss_pred CC-c--cchhhhHHHHHHHHHHh--------CCCCeEEEEEeccchHHHHHHHHHhhc---ccceeEEecccc
Q 018952 111 DP-K--RTRKSLALDIEELADQL--------GLGSKFYVVGFSMGGQVVWSCLKYISH---RLTGAALIAPVI 169 (348)
Q Consensus 111 ~~-~--~~~~~~~~di~~~l~~l--------~~~~~~~lvG~S~Gg~ia~~~a~~~p~---~v~~~il~~~~~ 169 (348)
.. + .+.....+|+..+.+.. ++..+.+|+|-|+||.-+-.+|..--+ ..++++++.+..
T Consensus 164 ~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 164 LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 22 1 25555666666555443 223589999999999999888865433 356666665544
No 199
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.14 E-value=0.0017 Score=46.89 Aligned_cols=38 Identities=16% Similarity=0.265 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhh
Q 018952 118 SLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 118 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
+..+.+..+++..+. .++.+.|||+||.+|..++....
T Consensus 49 ~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 49 QILDALKELVEKYPD-YSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHhhh
Confidence 445556666555554 79999999999999998887643
No 200
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.89 E-value=0.0043 Score=48.26 Aligned_cols=98 Identities=19% Similarity=0.148 Sum_probs=57.5
Q ss_pred CCceEEEEcCCC--CC-chhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh----CC--
Q 018952 62 AKYKIIFVHGFG--SS-RHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL----GL-- 132 (348)
Q Consensus 62 ~~~~vl~~hG~~--~~-~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l----~~-- 132 (348)
++..|-|+-|.. .. .-.|+ .+.+.|+++ ||.|++.-+.- |..... -..+..+.....++.+ +.
T Consensus 16 P~gvihFiGGaf~ga~P~itYr---~lLe~La~~-Gy~ViAtPy~~-tfDH~~---~A~~~~~~f~~~~~~L~~~~~~~~ 87 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYR---YLLERLADR-GYAVIATPYVV-TFDHQA---IAREVWERFERCLRALQKRGGLDP 87 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHH---HHHHHHHhC-CcEEEEEecCC-CCcHHH---HHHHHHHHHHHHHHHHHHhcCCCc
Confidence 355666777743 22 34456 778888876 99999987642 111000 0111111222222222 22
Q ss_pred -CCeEEEEEeccchHHHHHHHHHhhcccceeEEecc
Q 018952 133 -GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAP 167 (348)
Q Consensus 133 -~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~ 167 (348)
.-+++-+|||+|+-+-+.+...++..-++-++++-
T Consensus 88 ~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 88 AYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred ccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 13678999999999999888877655577777773
No 201
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.84 E-value=0.0096 Score=44.87 Aligned_cols=103 Identities=16% Similarity=0.274 Sum_probs=51.4
Q ss_pred eEEEEcCCCCCchhhhhhhcccHHHHhhcC---cEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh---CCCCeEEE
Q 018952 65 KIIFVHGFGSSRHDAAIAANLSPEVVDELG---IYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL---GLGSKFYV 138 (348)
Q Consensus 65 ~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g---~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l---~~~~~~~l 138 (348)
-|++..|.+.......+...+...+.+..| ..+..+++|-..... .-..+..+=++++...++.. ..+.+++|
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~-~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl 85 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN-SYGDSVAAGVANLVRLIEEYAARCPNTKIVL 85 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG-SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc-cccccHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 455555655433221100022334443333 445556666432111 00113334444444444332 23479999
Q ss_pred EEeccchHHHHHHHHH------hhcccceeEEeccc
Q 018952 139 VGFSMGGQVVWSCLKY------ISHRLTGAALIAPV 168 (348)
Q Consensus 139 vG~S~Gg~ia~~~a~~------~p~~v~~~il~~~~ 168 (348)
+|+|.|+.++..++.. ..++|.++++++-+
T Consensus 86 ~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 86 AGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp EEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred EecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 9999999999998876 34689999999854
No 202
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.80 E-value=0.0032 Score=47.94 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=34.4
Q ss_pred chhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHh
Q 018952 115 TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 115 ~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
.+.|..+.....|++.+.+.+++|+|||.|+.+..++...+
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 45666777778888887778999999999999999998764
No 203
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.65 E-value=0.0067 Score=47.40 Aligned_cols=47 Identities=19% Similarity=0.270 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHh----hcccceeEEeccc
Q 018952 120 ALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYI----SHRLTGAALIAPV 168 (348)
Q Consensus 120 ~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~----p~~v~~~il~~~~ 168 (348)
.+-+..+++..+ +++++.|||.||.+|...|... .++|.++...+++
T Consensus 72 ~~yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 72 LAYLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 344445555443 4699999999999999988863 3578888887764
No 204
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.62 E-value=0.11 Score=43.15 Aligned_cols=58 Identities=10% Similarity=-0.052 Sum_probs=47.6
Q ss_pred EEEEEeCCCCCCChHHHHHHHhhC----CCceEEEeCCCCcceeeC--cchHHHHHHHHhcccc
Q 018952 287 VHLWQGDEDRLVPVILQRYISKKL----PWIRYHEIPGSGHLIADA--DGMTEAIIKALLLGEK 344 (348)
Q Consensus 287 vl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~~~~ 344 (348)
.+.+.+..|.++|.+..+++.+.. -+++-+.+.++-|..+.. |..+.+...+|+++..
T Consensus 228 ~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 228 QLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred ceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 788889999999999988885544 245666777899999884 9999999999998654
No 205
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.58 E-value=0.0024 Score=53.17 Aligned_cols=102 Identities=16% Similarity=0.234 Sum_probs=79.3
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCc----cchhhhHHHHHHHHHHhCC--CCe
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPK----RTRKSLALDIEELADQLGL--GSK 135 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~di~~~l~~l~~--~~~ 135 (348)
.+|+|+..-|.+.+..... .-...|. +-+-+.+++|-+|.|.+.+. -++++.+.|...+++.++. .++
T Consensus 62 drPtV~~T~GY~~~~~p~r---~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~k 135 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRR---SEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGK 135 (448)
T ss_pred CCCeEEEecCcccccCccc---cchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCC
Confidence 4688888889887654443 2223333 34689999999999987553 2889999999988888752 478
Q ss_pred EEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 136 FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 136 ~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
.+--|-|-||+.++.+=.-||+.|++.|...+..
T Consensus 136 WISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 136 WISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred ceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 9999999999999998888999999999776554
No 206
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.58 E-value=0.013 Score=48.66 Aligned_cols=85 Identities=22% Similarity=0.348 Sum_probs=58.3
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh----CCCCeEEE
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL----GLGSKFYV 138 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l----~~~~~~~l 138 (348)
...-||+.|=|+-...=+ .+...|.+ +|+.|+-+|-.-|=-|. .+.++.++|+..++++. +. +++.|
T Consensus 260 d~~av~~SGDGGWr~lDk---~v~~~l~~-~gvpVvGvdsLRYfW~~----rtPe~~a~Dl~r~i~~y~~~w~~-~~~~l 330 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDK---EVAEALQK-QGVPVVGVDSLRYFWSE----RTPEQIAADLSRLIRFYARRWGA-KRVLL 330 (456)
T ss_pred ceEEEEEecCCchhhhhH---HHHHHHHH-CCCceeeeehhhhhhcc----CCHHHHHHHHHHHHHHHHHhhCc-ceEEE
Confidence 344567777666444444 55555555 49999999954332332 37788999999888876 45 79999
Q ss_pred EEeccchHHHHHHHHHhh
Q 018952 139 VGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 139 vG~S~Gg~ia~~~a~~~p 156 (348)
+|+|+|+=+.-..-.+.|
T Consensus 331 iGySfGADvlP~~~n~L~ 348 (456)
T COG3946 331 IGYSFGADVLPFAYNRLP 348 (456)
T ss_pred EeecccchhhHHHHHhCC
Confidence 999999987755544444
No 207
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.51 E-value=0.0037 Score=42.64 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=22.5
Q ss_pred cCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhh
Q 018952 44 LRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAA 80 (348)
Q Consensus 44 ~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~ 80 (348)
..+|..|++....+ +..+..||||+|||+++-..|.
T Consensus 74 ~I~g~~iHFih~rs-~~~~aiPLll~HGWPgSf~Ef~ 109 (112)
T PF06441_consen 74 EIDGLDIHFIHVRS-KRPNAIPLLLLHGWPGSFLEFL 109 (112)
T ss_dssp EETTEEEEEEEE---S-TT-EEEEEE--SS--GGGGH
T ss_pred EEeeEEEEEEEeeC-CCCCCeEEEEECCCCccHHhHH
Confidence 34799999988754 3345689999999999987765
No 208
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.46 E-value=0.0069 Score=47.95 Aligned_cols=22 Identities=27% Similarity=0.322 Sum_probs=19.7
Q ss_pred CeEEEEEeccchHHHHHHHHHh
Q 018952 134 SKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
.++++.|||+||.+|..++...
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHH
Confidence 6899999999999999888754
No 209
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.46 E-value=0.017 Score=52.31 Aligned_cols=106 Identities=17% Similarity=0.134 Sum_probs=64.0
Q ss_pred CceEEEEcCCCC---CchhhhhhhcccHHHHhhcCcEEEEEcCC----CC---CCCCCCCccchhhhHHHHHHHHHHh--
Q 018952 63 KYKIIFVHGFGS---SRHDAAIAANLSPEVVDELGIYIVSFDRP----GY---GESDPDPKRTRKSLALDIEELADQL-- 130 (348)
Q Consensus 63 ~~~vl~~hG~~~---~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~---G~S~~~~~~~~~~~~~di~~~l~~l-- 130 (348)
-|++|++||.+- +...+.. .....+......-|+++.+| |+ |.+..+.+..+.|+...+.-+-+++
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~--~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEI--ISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhh--cCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 689999999863 2222220 12233333335667777776 32 3333333445666655554444443
Q ss_pred -C-CCCeEEEEEeccchHHHHHHHHH--hhcccceeEEeccccc
Q 018952 131 -G-LGSKFYVVGFSMGGQVVWSCLKY--ISHRLTGAALIAPVIN 170 (348)
Q Consensus 131 -~-~~~~~~lvG~S~Gg~ia~~~a~~--~p~~v~~~il~~~~~~ 170 (348)
| -.+++.++|||.||..+..+... ....+.++|.+++...
T Consensus 190 FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 190 FGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred cCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 3 24799999999999999776652 2356888888887644
No 210
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.43 E-value=0.0063 Score=53.56 Aligned_cols=84 Identities=18% Similarity=0.163 Sum_probs=52.4
Q ss_pred hhhhhhcccHHHHhhcCcE-----EEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh---CCCCeEEEEEeccchHHHH
Q 018952 78 DAAIAANLSPEVVDELGIY-----IVSFDRPGYGESDPDPKRTRKSLALDIEELADQL---GLGSKFYVVGFSMGGQVVW 149 (348)
Q Consensus 78 ~~~~~~~~~~~l~~~~g~~-----vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l---~~~~~~~lvG~S~Gg~ia~ 149 (348)
.|. .+++.|.+. ||. ...+|+|= |.. .....+++-..+...++.. +-++|++|+||||||.+++
T Consensus 157 vw~---kLIe~L~~i-GY~~~nL~gAPYDWRl---s~~-~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~l 228 (642)
T PLN02517 157 VWA---VLIANLARI-GYEEKNMYMAAYDWRL---SFQ-NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFL 228 (642)
T ss_pred eHH---HHHHHHHHc-CCCCCceeeccccccc---Ccc-chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHH
Confidence 456 778888764 775 33345551 110 0112344555566666544 3247999999999999999
Q ss_pred HHHHHh---------------hcccceeEEecccc
Q 018952 150 SCLKYI---------------SHRLTGAALIAPVI 169 (348)
Q Consensus 150 ~~a~~~---------------p~~v~~~il~~~~~ 169 (348)
.+.... ...|++.|.+++..
T Consensus 229 yFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 229 HFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 876531 12588999998764
No 211
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.25 E-value=0.0071 Score=51.38 Aligned_cols=86 Identities=20% Similarity=0.165 Sum_probs=53.3
Q ss_pred hhhhhhcccHHHHhhcCcE------EEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHH
Q 018952 78 DAAIAANLSPEVVDELGIY------IVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSC 151 (348)
Q Consensus 78 ~~~~~~~~~~~l~~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~ 151 (348)
.|. .+++.+..- ||. -..+|+|=--......+..+..+..-|+...+.-|- +|++||+||||+.+.+.+
T Consensus 125 ~w~---~~i~~lv~~-GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~-kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 125 YWH---ELIENLVGI-GYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGG-KKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHH---HHHHHHHhh-CcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCC-CceEEEecCCccHHHHHH
Confidence 666 777776653 665 345677731111111112344444444444444454 899999999999999999
Q ss_pred HHHhhc--------ccceeEEeccc
Q 018952 152 LKYISH--------RLTGAALIAPV 168 (348)
Q Consensus 152 a~~~p~--------~v~~~il~~~~ 168 (348)
...+++ .+++++-+++.
T Consensus 200 l~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 200 LKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HhcccccchhHHHHHHHHHHccCch
Confidence 987766 36777777654
No 212
>PLN02162 triacylglycerol lipase
Probab=95.93 E-value=0.022 Score=48.77 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHH
Q 018952 118 SLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 118 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~ 153 (348)
+..+.+.+.++.... .++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKN-LKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHH
Confidence 344455555555443 68999999999999988765
No 213
>PLN00413 triacylglycerol lipase
Probab=95.90 E-value=0.026 Score=48.54 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHH
Q 018952 118 SLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 118 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~ 153 (348)
+..+.+.++++.... .++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~-~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPT-SKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCC-CeEEEEecCHHHHHHHHHHH
Confidence 456667777776554 78999999999999998875
No 214
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.80 E-value=0.32 Score=46.88 Aligned_cols=96 Identities=15% Similarity=0.231 Sum_probs=68.6
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCC--CCCCCccchhhhHHHHHHHHHHhCCCCeEEE
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGE--SDPDPKRTRKSLALDIEELADQLGLGSKFYV 138 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~--S~~~~~~~~~~~~~di~~~l~~l~~~~~~~l 138 (348)
+..|++.|+|..-+...... .++.+ ...|-+|. +...+..++++.+.-...-++.+....+..+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~-------~la~r-------le~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl 2186 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALE-------SLASR-------LEIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRL 2186 (2376)
T ss_pred ccCCceEEEeccccchHHHH-------HHHhh-------cCCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeee
Confidence 34689999999888765554 45554 22333343 2233445888888887788888876679999
Q ss_pred EEeccchHHHHHHHHHhh--cccceeEEeccccc
Q 018952 139 VGFSMGGQVVWSCLKYIS--HRLTGAALIAPVIN 170 (348)
Q Consensus 139 vG~S~Gg~ia~~~a~~~p--~~v~~~il~~~~~~ 170 (348)
+|+|+|+.++..+|.... +....+|++++...
T Consensus 2187 ~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2187 AGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred eccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 999999999999987433 34667999998643
No 215
>PLN02454 triacylglycerol lipase
Probab=95.76 E-value=0.024 Score=48.07 Aligned_cols=20 Identities=15% Similarity=0.170 Sum_probs=18.0
Q ss_pred eEEEEEeccchHHHHHHHHH
Q 018952 135 KFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 135 ~~~lvG~S~Gg~ia~~~a~~ 154 (348)
++++.|||+||.+|+..|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 49999999999999998864
No 216
>PLN02571 triacylglycerol lipase
Probab=95.69 E-value=0.017 Score=48.93 Aligned_cols=38 Identities=11% Similarity=0.123 Sum_probs=28.1
Q ss_pred hhhHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHH
Q 018952 117 KSLALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 117 ~~~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
+++.++|..+++.... +.++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4455666677766543 1268999999999999988875
No 217
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.55 E-value=0.024 Score=47.41 Aligned_cols=84 Identities=17% Similarity=0.186 Sum_probs=50.9
Q ss_pred CCceEEEEcCCCC-CchhhhhhhcccHHHHhhc-CcEEEEEcCCCCCCCCC----CCccchhhhHHHHHHHHHHhCCCCe
Q 018952 62 AKYKIIFVHGFGS-SRHDAAIAANLSPEVVDEL-GIYIVSFDRPGYGESDP----DPKRTRKSLALDIEELADQLGLGSK 135 (348)
Q Consensus 62 ~~~~vl~~hG~~~-~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~----~~~~~~~~~~~di~~~l~~l~~~~~ 135 (348)
++..+++.||+-+ +...|. ..+....++. +. .+..+|+-.... ....--+..++++.+.+....+ ++
T Consensus 79 ~~HLvVlthGi~~~~~~~~~---~~~~~~~kk~p~~---~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si-~k 151 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWK---EKIEQMTKKMPDK---LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSI-EK 151 (405)
T ss_pred CceEEEeccccccccHHHHH---HHHHhhhcCCCcc---eEeeeccccchhhccccceeeecccHHHHhhhhhcccc-ce
Confidence 4568999999887 677787 5555555542 23 333333322211 1111223455666666666667 89
Q ss_pred EEEEEeccchHHHHHHH
Q 018952 136 FYVVGFSMGGQVVWSCL 152 (348)
Q Consensus 136 ~~lvG~S~Gg~ia~~~a 152 (348)
+..+|||+||.++-.+.
T Consensus 152 ISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 152 ISFVGHSLGGLVARYAI 168 (405)
T ss_pred eeeeeeecCCeeeeEEE
Confidence 99999999999875443
No 218
>PLN02408 phospholipase A1
Probab=95.16 E-value=0.035 Score=46.41 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHHhh
Q 018952 119 LALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 119 ~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
..+.|..+++.... +.++++.|||+||.+|...|....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 34455566655543 136999999999999998887543
No 219
>PLN02310 triacylglycerol lipase
Probab=95.13 E-value=0.038 Score=46.86 Aligned_cols=38 Identities=16% Similarity=0.228 Sum_probs=27.3
Q ss_pred hhhHHHHHHHHHHhC---CCCeEEEEEeccchHHHHHHHHH
Q 018952 117 KSLALDIEELADQLG---LGSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 117 ~~~~~di~~~l~~l~---~~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
++..+.|..+++... .+.++.+.|||+||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344555666666552 22489999999999999988854
No 220
>PLN02934 triacylglycerol lipase
Probab=95.08 E-value=0.04 Score=47.82 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=27.7
Q ss_pred hhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHH
Q 018952 117 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 117 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~ 153 (348)
++....+..+++.... .++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~-~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN-AKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCC-CeEEEeccccHHHHHHHHHH
Confidence 3455566666666544 79999999999999998875
No 221
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.92 E-value=0.31 Score=39.55 Aligned_cols=128 Identities=19% Similarity=0.216 Sum_probs=78.3
Q ss_pred eeecCCCeEEEEeeccCCc--cCCCceEEEEcCCCCCchh-hhhhhccc----------HHHHhhcCcEEEEEcCC-CCC
Q 018952 41 RIKLRDGRHLAYKEHGVSK--ELAKYKIIFVHGFGSSRHD-AAIAANLS----------PEVVDELGIYIVSFDRP-GYG 106 (348)
Q Consensus 41 ~~~~~~g~~l~y~~~g~~~--~~~~~~vl~~hG~~~~~~~-~~~~~~~~----------~~l~~~~g~~vi~~D~~-G~G 106 (348)
++...++..++|+.+-... ...+|..+.+.|.++.+.. +.-.+++- ....+. -.++.+|.| |.|
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaG 84 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAG 84 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCc
Confidence 3444567667666553221 1346788899988764432 21000110 112232 457888876 788
Q ss_pred CCCC--CCcc--chhhhHHHHHHHHHHhC-----C-CCeEEEEEeccchHHHHHHHHHhhc---------ccceeEEecc
Q 018952 107 ESDP--DPKR--TRKSLALDIEELADQLG-----L-GSKFYVVGFSMGGQVVWSCLKYISH---------RLTGAALIAP 167 (348)
Q Consensus 107 ~S~~--~~~~--~~~~~~~di~~~l~~l~-----~-~~~~~lvG~S~Gg~ia~~~a~~~p~---------~v~~~il~~~ 167 (348)
.|-- ...| +.++.+.|+.++++.+- . ..+++++--|+||-+|..++...-+ .+.+++|=++
T Consensus 85 fSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 85 FSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred eeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 8853 2233 67889999999998761 1 2689999999999999888764322 3556676666
Q ss_pred ccc
Q 018952 168 VIN 170 (348)
Q Consensus 168 ~~~ 170 (348)
...
T Consensus 165 WIS 167 (414)
T KOG1283|consen 165 WIS 167 (414)
T ss_pred ccC
Confidence 543
No 222
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.64 E-value=0.057 Score=47.04 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHhC---CCCeEEEEEeccchHHHHHHHHH
Q 018952 118 SLALDIEELADQLG---LGSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 118 ~~~~di~~~l~~l~---~~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
+..++|..+++... .+.++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34556677776553 22479999999999999988864
No 223
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.54 E-value=0.4 Score=34.60 Aligned_cols=78 Identities=21% Similarity=0.227 Sum_probs=51.1
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcE-EEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEec
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIY-IVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFS 142 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 142 (348)
..||+.-||+..+.... .++ ...++. ++++|++.....- + .. .. ..+-+|.+|
T Consensus 12 ~LIvyFaGwgtpps~v~---HLi----lpeN~dl~lcYDY~dl~ldf-----D-------fs------Ay-~hirlvAwS 65 (214)
T COG2830 12 HLIVYFAGWGTPPSAVN---HLI----LPENHDLLLCYDYQDLNLDF-----D-------FS------AY-RHIRLVAWS 65 (214)
T ss_pred EEEEEEecCCCCHHHHh---hcc----CCCCCcEEEEeehhhcCccc-----c-------hh------hh-hhhhhhhhh
Confidence 48899999999887776 332 222344 5778877432110 1 11 12 467889999
Q ss_pred cchHHHHHHHHHhhcccceeEEecccc
Q 018952 143 MGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 143 ~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
||-.+|-++.... ++++.+.+++..
T Consensus 66 MGVwvAeR~lqg~--~lksatAiNGTg 90 (214)
T COG2830 66 MGVWVAERVLQGI--RLKSATAINGTG 90 (214)
T ss_pred HHHHHHHHHHhhc--cccceeeecCCC
Confidence 9999998888764 477777777643
No 224
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=94.49 E-value=0.34 Score=40.21 Aligned_cols=57 Identities=11% Similarity=0.085 Sum_probs=43.3
Q ss_pred CCCcEEEEEeCCCCCCChHHHHHHHhhCCCc-eEEEeCCCCcceeeCcchHHHHHHHHhc
Q 018952 283 SEGSVHLWQGDEDRLVPVILQRYISKKLPWI-RYHEIPGSGHLIADADGMTEAIIKALLL 341 (348)
Q Consensus 283 ~~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 341 (348)
+..|-.++.|+.|.+.+++.+.-..+.+|+. .+..+|+..|..... .+.+.+..|++
T Consensus 328 LalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~--~i~esl~~fln 385 (507)
T COG4287 328 LALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ--FIKESLEPFLN 385 (507)
T ss_pred ccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH--HHHHHHHHHHH
Confidence 4445899999999999999999999999885 577789999987653 33444444443
No 225
>PLN02324 triacylglycerol lipase
Probab=94.49 E-value=0.063 Score=45.59 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHH
Q 018952 119 LALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 119 ~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
+.+.|..+++...- +.++++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 44456666665432 2379999999999999988864
No 226
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.41 E-value=0.15 Score=42.51 Aligned_cols=36 Identities=22% Similarity=0.511 Sum_probs=29.1
Q ss_pred CeEEEEEeccchHHHHHHHHHhhc-----ccceeEEecccc
Q 018952 134 SKFYVVGFSMGGQVVWSCLKYISH-----RLTGAALIAPVI 169 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~~p~-----~v~~~il~~~~~ 169 (348)
.++.|||||+|+.+.......-.+ .|+.+++++++.
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 689999999999999877664443 489999998754
No 227
>PLN02753 triacylglycerol lipase
Probab=94.32 E-value=0.077 Score=46.34 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHhCC----CCeEEEEEeccchHHHHHHHHH
Q 018952 118 SLALDIEELADQLGL----GSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 118 ~~~~di~~~l~~l~~----~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
+..+.|..+++..+. +.++++.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344455666655432 2589999999999999998864
No 228
>PLN02802 triacylglycerol lipase
Probab=94.25 E-value=0.08 Score=46.04 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHHh
Q 018952 119 LALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 119 ~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
..++|..+++...- +.++++.|||+||.+|...|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34455555555432 23799999999999999888653
No 229
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.05 E-value=0.14 Score=44.97 Aligned_cols=112 Identities=20% Similarity=0.162 Sum_probs=65.4
Q ss_pred EeeccCCccCCCceEEEEcCCCC---CchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHH-
Q 018952 52 YKEHGVSKELAKYKIIFVHGFGS---SRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELA- 127 (348)
Q Consensus 52 y~~~g~~~~~~~~~vl~~hG~~~---~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l- 127 (348)
|+.|-++-+.++-.|+-+||.|. ++..-+ .+.+.+++..|.-|+.+|+-=-.+..-| ...++.--...-+|
T Consensus 385 ~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE---~YLr~Wa~aL~cPiiSVdYSLAPEaPFP--RaleEv~fAYcW~in 459 (880)
T KOG4388|consen 385 LELWHRPAPRSRSLIVHCHGGGFVAQSSKSHE---PYLRSWAQALGCPIISVDYSLAPEAPFP--RALEEVFFAYCWAIN 459 (880)
T ss_pred cccCCCCCCCCceEEEEecCCceeeecccccc---HHHHHHHHHhCCCeEEeeeccCCCCCCC--cHHHHHHHHHHHHhc
Confidence 44443333334557888999884 444444 6678888888899999998533222211 12222211111122
Q ss_pred --HHhCC-CCeEEEEEeccchHHHHHHHHHhhc----ccceeEEeccc
Q 018952 128 --DQLGL-GSKFYVVGFSMGGQVVWSCLKYISH----RLTGAALIAPV 168 (348)
Q Consensus 128 --~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~~il~~~~ 168 (348)
..+|. +++++++|-|.||.+.+..|.+.-+ .-+|+++.-+.
T Consensus 460 n~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 460 NCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred CHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 23444 5899999999999977666554211 24677776554
No 230
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.01 E-value=0.85 Score=40.44 Aligned_cols=61 Identities=20% Similarity=0.233 Sum_probs=47.8
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHhhC----C--------CceEEEeCCCCcceeeC---cchHHHHHHHHhcccc
Q 018952 284 EGSVHLWQGDEDRLVPVILQRYISKKL----P--------WIRYHEIPGSGHLIADA---DGMTEAIIKALLLGEK 344 (348)
Q Consensus 284 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~--------~~~~~~~~~~gH~~~~e---p~~~~~~i~~fl~~~~ 344 (348)
-..+++.||..|.++|+..+.++++++ . -.++..+||.+|+.-.. +-.....|.+|+++-.
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGK 428 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCC
Confidence 347999999999999998887666554 2 14788999999998663 5677788889998754
No 231
>PLN02761 lipase class 3 family protein
Probab=93.92 E-value=0.1 Score=45.56 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=26.3
Q ss_pred hhHHHHHHHHHHhC-----CCCeEEEEEeccchHHHHHHHHH
Q 018952 118 SLALDIEELADQLG-----LGSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 118 ~~~~di~~~l~~l~-----~~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
++.+.|..+++..+ .+-++++.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34455666665542 22479999999999999988853
No 232
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=93.66 E-value=0.14 Score=38.40 Aligned_cols=57 Identities=18% Similarity=0.121 Sum_probs=44.0
Q ss_pred cEEEEEeCCCCCCChHHHHHHHhhC---CC--ceEEEeCCCCcceeeC----cchHHHHHHHHhcc
Q 018952 286 SVHLWQGDEDRLVPVILQRYISKKL---PW--IRYHEIPGSGHLIADA----DGMTEAIIKALLLG 342 (348)
Q Consensus 286 Pvl~i~G~~D~~~~~~~~~~~~~~~---~~--~~~~~~~~~gH~~~~e----p~~~~~~i~~fl~~ 342 (348)
+++-|-|+.|.++.+.......+.+ |. ....+.+|+||+-... .+++.-.|.+|+.+
T Consensus 136 aLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 136 ALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred eeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 4777999999999988776665554 32 3677889999997764 57788888888864
No 233
>PLN02719 triacylglycerol lipase
Probab=93.65 E-value=0.12 Score=45.06 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHhC----CCCeEEEEEeccchHHHHHHHHH
Q 018952 119 LALDIEELADQLG----LGSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 119 ~~~di~~~l~~l~----~~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
..+.|..+++... .+.++.+.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3444555555442 12489999999999999988864
No 234
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.08 E-value=0.14 Score=37.37 Aligned_cols=115 Identities=12% Similarity=0.135 Sum_probs=65.3
Q ss_pred CeEEEEeeccCCccCCCceEEEEcCCCCCchhhh-hhhcccHHHHhh--cC-cEEEEEcCCCCCCCCC-CCccchhhhH-
Q 018952 47 GRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAA-IAANLSPEVVDE--LG-IYIVSFDRPGYGESDP-DPKRTRKSLA- 120 (348)
Q Consensus 47 g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~-~~~~~~~~l~~~--~g-~~vi~~D~~G~G~S~~-~~~~~~~~~~- 120 (348)
+..+.+..+|-. +.+||..+-.++.-..+. + -.+..+++. .| ...++++ |....+- ....+..+.+
T Consensus 14 ~RdMel~ryGHa----G~pVvvFpts~Grf~eyed~--G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~ 85 (227)
T COG4947 14 NRDMELNRYGHA----GIPVVVFPTSGGRFNEYEDF--GMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAE 85 (227)
T ss_pred cchhhhhhccCC----CCcEEEEecCCCcchhhhhc--ccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHH
Confidence 556777778764 456666666666555544 1 123333332 13 2344443 3322211 0011122222
Q ss_pred ---HHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 121 ---LDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 121 ---~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
.--.-+++..-. ...++-|-||||..|..+.-++|+.+.++|.+++..+
T Consensus 86 rH~AyerYv~eEalp-gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 86 RHRAYERYVIEEALP-GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHHHHHHHHhhcC-CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 222233433333 4678889999999999999999999999999998653
No 235
>PLN02847 triacylglycerol lipase
Probab=92.61 E-value=0.22 Score=44.29 Aligned_cols=21 Identities=29% Similarity=0.292 Sum_probs=18.6
Q ss_pred CeEEEEEeccchHHHHHHHHH
Q 018952 134 SKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999888764
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.53 E-value=0.75 Score=36.15 Aligned_cols=62 Identities=21% Similarity=0.350 Sum_probs=39.5
Q ss_pred CcEEEEEcCCCC-----CCCCCCCccchhhhHHHHHHHHHHh-CCCCeEEEEEeccchHHHHHHHHHh
Q 018952 94 GIYIVSFDRPGY-----GESDPDPKRTRKSLALDIEELADQL-GLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 94 g~~vi~~D~~G~-----G~S~~~~~~~~~~~~~di~~~l~~l-~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
|+.+..+++|.. |.....-+.+..+=++.+.+.++.. ..+++++++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 456666777651 1111112336666666677666652 2347899999999999998877654
No 237
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.49 E-value=7 Score=34.31 Aligned_cols=119 Identities=15% Similarity=0.129 Sum_probs=70.4
Q ss_pred eeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcE-EEEEcCCCCCCCCCCCccc-hhh
Q 018952 41 RIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIY-IVSFDRPGYGESDPDPKRT-RKS 118 (348)
Q Consensus 41 ~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~-vi~~D~~G~G~S~~~~~~~-~~~ 118 (348)
++..+.+.++.|+-. |++ -..|..|+.-|+-. .+.++ - -.+.++.|.- .+.-|.|=-|.+--..... -+.
T Consensus 269 r~~D~~reEi~yYFn-PGD-~KPPL~VYFSGyR~-aEGFE---g--y~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE~~ 340 (511)
T TIGR03712 269 RLVDSKRQEFIYYFN-PGD-FKPPLNVYFSGYRP-AEGFE---G--YFMMKRLGAPFLLIGDPRLEGGAFYLGSDEYEQG 340 (511)
T ss_pred eEecCCCCeeEEecC-CcC-CCCCeEEeeccCcc-cCcch---h--HHHHHhcCCCeEEeeccccccceeeeCcHHHHHH
Confidence 344445666666554 433 22356688888765 44443 1 1123333333 4445777666653211112 344
Q ss_pred hHHHHHHHHHHhCC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccc
Q 018952 119 LALDIEELADQLGL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVI 169 (348)
Q Consensus 119 ~~~di~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~ 169 (348)
..+-|.+.++.||. .+.++|-|-|||..-|+.++++.. ..++|+--|..
T Consensus 341 I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~ 390 (511)
T TIGR03712 341 IINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLV 390 (511)
T ss_pred HHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCccc
Confidence 56667888889987 357999999999999999998642 34555544543
No 238
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.26 E-value=0.25 Score=41.59 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=30.2
Q ss_pred hhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHH
Q 018952 117 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 117 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
..+.+++..+++...- -++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~-~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN-YSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEecCChHHHHHHHHHHH
Confidence 4666777777777764 799999999999999988864
No 239
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.26 E-value=1.3 Score=35.56 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=30.1
Q ss_pred HHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 122 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 122 di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
||...+..+-.+.++.+-|||+||.+|..+..++. +..+..-+|.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 33333444434479999999999999998888764 3444555543
No 240
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.26 E-value=1.3 Score=35.56 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=30.1
Q ss_pred HHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 122 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 122 di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
||...+..+-.+.++.+-|||+||.+|..+..++. +..+..-+|.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 33333444434479999999999999998888764 3444555543
No 241
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=88.14 E-value=9.5 Score=28.92 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=56.0
Q ss_pred cceeecCCCeEEEEeeccCCccCCCceE-EEEcCCCCCchhhhhhhcccHHHHhhcCcEE------EEEcCCCCCCCCCC
Q 018952 39 APRIKLRDGRHLAYKEHGVSKELAKYKI-IFVHGFGSSRHDAAIAANLSPEVVDELGIYI------VSFDRPGYGESDPD 111 (348)
Q Consensus 39 ~~~~~~~~g~~l~y~~~g~~~~~~~~~v-l~~hG~~~~~~~~~~~~~~~~~l~~~~g~~v------i~~D~~G~G~S~~~ 111 (348)
...+.. +|..+.|..+...+-..+..| -++-||....+.-. +++..+.++ |+.+ +.++..
T Consensus 37 ~ge~~~-~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~---P~l~~l~~~-~~~~~~y~~t~~IN~d-------- 103 (184)
T TIGR01626 37 YGEIVL-SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNA---SLIDAIKAA-KFPPVKYQTTTIINAD-------- 103 (184)
T ss_pred CceEEE-cCCcccceeccHHHcCCCEEEEEEEecCCChhhccc---hHHHHHHHc-CCCcccccceEEEECc--------
Confidence 344555 566789998865443333333 34557777777777 888888665 7776 666522
Q ss_pred CccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHH
Q 018952 112 PKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSC 151 (348)
Q Consensus 112 ~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~ 151 (348)
.+.......+..+++..+.+-++..+..+-.|.++..+
T Consensus 104 --d~~~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~ 141 (184)
T TIGR01626 104 --DAIVGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAW 141 (184)
T ss_pred --cchhhHHHHHHHHHHHhcccCCcceEEECCcchHHHhc
Confidence 12233444566677776653343344444455554433
No 242
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=88.04 E-value=5 Score=26.86 Aligned_cols=80 Identities=14% Similarity=0.120 Sum_probs=52.8
Q ss_pred cccHHHHhhcCcEEEEEcCCCCCCCCCCC--ccchhhhHHHHHHHHHHhCCCCeEEEEEeccch--HHHHHHHHHhhccc
Q 018952 84 NLSPEVVDELGIYIVSFDRPGYGESDPDP--KRTRKSLALDIEELADQLGLGSKFYVVGFSMGG--QVVWSCLKYISHRL 159 (348)
Q Consensus 84 ~~~~~l~~~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg--~ia~~~a~~~p~~v 159 (348)
+.+..+.+..||-.=.+.++.+|.+.... ....+.=...+..+++.... .++++||-|--. -+-..+|.++|++|
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~-~kfiLIGDsgq~DpeiY~~ia~~~P~~i 92 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPE-RKFILIGDSGQHDPEIYAEIARRFPGRI 92 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCC-CcEEEEeeCCCcCHHHHHHHHHHCCCCE
Confidence 45666666667766667777775553211 11113445668888888876 899999977443 34456778899999
Q ss_pred ceeEE
Q 018952 160 TGAAL 164 (348)
Q Consensus 160 ~~~il 164 (348)
.++.+
T Consensus 93 ~ai~I 97 (100)
T PF09949_consen 93 LAIYI 97 (100)
T ss_pred EEEEE
Confidence 88865
No 243
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.72 E-value=1.2 Score=39.49 Aligned_cols=116 Identities=17% Similarity=0.126 Sum_probs=69.0
Q ss_pred EEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcc----cHHHHhhcCcEEEEEcCCCCCCCCC----CCcc------
Q 018952 49 HLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANL----SPEVVDELGIYIVSFDRPGYGESDP----DPKR------ 114 (348)
Q Consensus 49 ~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~----~~~l~~~~g~~vi~~D~~G~G~S~~----~~~~------ 114 (348)
.|.+..+-|. .=+.-++.+-|.|.....-. .. +..-. .+||.++.-|- ||..+.. ....
T Consensus 16 ~i~fev~LP~--~WNgR~~~~GgGG~~G~i~~---~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~ 88 (474)
T PF07519_consen 16 NIRFEVWLPD--NWNGRFLQVGGGGFAGGINY---ADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALL 88 (474)
T ss_pred eEEEEEECCh--hhccCeEEECCCeeeCcccc---cccccccchhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHH
Confidence 6777766443 11234555555443322221 11 12222 34899998886 4543321 1111
Q ss_pred -----chhhhHHHHHHHHHHh-CC-CCeEEEEEeccchHHHHHHHHHhhcccceeEEecccccc
Q 018952 115 -----TRKSLALDIEELADQL-GL-GSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVINY 171 (348)
Q Consensus 115 -----~~~~~~~di~~~l~~l-~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~~ 171 (348)
++.+.+.--+++++.. +. .+.-+..|.|.||.-++..|.+||+.+++++.-+|...+
T Consensus 89 dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 89 DFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 2223333334444444 22 367899999999999999999999999999999998764
No 244
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.26 E-value=1.6 Score=38.97 Aligned_cols=54 Identities=17% Similarity=0.203 Sum_probs=33.3
Q ss_pred chhhhHHHHHHHHHHhCC--CCeEEEEEeccchHHHHHHHHH-----hhc------ccceeEEeccc
Q 018952 115 TRKSLALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCLKY-----ISH------RLTGAALIAPV 168 (348)
Q Consensus 115 ~~~~~~~di~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~-----~p~------~v~~~il~~~~ 168 (348)
+...-.+.+.+.+...++ +.+++.+||||||.++=.+... .|+ ...|+|+++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 333444445555555554 3689999999999888555432 132 35677777653
No 245
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=83.97 E-value=6.3 Score=30.24 Aligned_cols=63 Identities=19% Similarity=0.272 Sum_probs=42.5
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCc-EEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEE
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGI-YIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 139 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 139 (348)
.....|++.||...++.... .-++.+....|| .|+....-|+. .++++.+-++.-++ ++++|+
T Consensus 136 k~e~~vlmgHGt~h~s~~~Y---acLd~~~~~~~f~~v~v~~ve~yP------------~~d~vi~~l~~~~~-~~v~L~ 199 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAY---ACLDHVLDEYGFDNVFVAAVEGYP------------LVDTVIEYLRKNGI-KEVHLI 199 (265)
T ss_pred cCeEEEEEecCCCccHHHHH---HHHHHHHHhcCCCceEEEEecCCC------------cHHHHHHHHHHcCC-ceEEEe
Confidence 44567888999988877776 677888888788 56655554441 24555566666677 666665
No 246
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=80.43 E-value=16 Score=27.57 Aligned_cols=58 Identities=16% Similarity=0.398 Sum_probs=40.6
Q ss_pred ccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCC
Q 018952 38 TAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYG 106 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G 106 (348)
+...+...||..+....++ .|+|...|........ +.+..+.++.|+.|+.+...+.+
T Consensus 54 ~~~~f~l~dG~~v~lsd~~--------lV~FwaswCp~C~~e~---P~L~~l~~~~g~~Vi~Vs~D~~~ 111 (181)
T PRK13728 54 APRWFRLSNGRQVNLADWK--------VVLFMQGHCPYCHQFD---PVLKQLAQQYGFSVFPYTLDGQG 111 (181)
T ss_pred CCCccCCCCCCEeehhHce--------EEEEECCCCHhHHHHH---HHHHHHHHHcCCEEEEEEeCCCC
Confidence 4556677788776655442 6666666666666666 77888888889999999876543
No 247
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=79.73 E-value=14 Score=30.26 Aligned_cols=30 Identities=23% Similarity=0.418 Sum_probs=23.5
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHHHHHH
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
.+.+....++++.++|+|-|+.+|-.+|..
T Consensus 83 ~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 83 FLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 334555556789999999999999888854
No 248
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=77.21 E-value=8.8 Score=33.75 Aligned_cols=123 Identities=16% Similarity=0.132 Sum_probs=64.4
Q ss_pred EEEeeccC-CccCCCceEEEEcCCCC---C--chhhhhhhcccHHHHhhcCcEEEEEcCC----C---C-CCCCCCCccc
Q 018952 50 LAYKEHGV-SKELAKYKIIFVHGFGS---S--RHDAAIAANLSPEVVDELGIYIVSFDRP----G---Y-GESDPDPKRT 115 (348)
Q Consensus 50 l~y~~~g~-~~~~~~~~vl~~hG~~~---~--~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G---~-G~S~~~~~~~ 115 (348)
++.-+|-| +++.+...+|.|-|.|- + -..|+ -..|+.....-|+.+++| | . |.++.+.+..
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd-----Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG 195 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD-----GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG 195 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec-----cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc
Confidence 33444444 33344557788887662 1 22233 233444433445555555 1 2 3333333444
Q ss_pred hhhhHHH---HHHHHHHhCC-CCeEEEEEeccchHHH-HHHHH-HhhcccceeEEecccccccCCCCC
Q 018952 116 RKSLALD---IEELADQLGL-GSKFYVVGFSMGGQVV-WSCLK-YISHRLTGAALIAPVINYWWPGFP 177 (348)
Q Consensus 116 ~~~~~~d---i~~~l~~l~~-~~~~~lvG~S~Gg~ia-~~~a~-~~p~~v~~~il~~~~~~~~~~~~~ 177 (348)
+-|+.-. +.+=+...|- .+++.|+|-|.|+.-. .++.+ .....++..|+-++...-.|...+
T Consensus 196 l~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~pWA~~s 263 (601)
T KOG4389|consen 196 LLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNNPWAIVS 263 (601)
T ss_pred hHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCCCccccC
Confidence 4444333 3444444443 3799999999998644 33332 112468888888887765554433
No 249
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.58 E-value=9.5 Score=33.69 Aligned_cols=39 Identities=26% Similarity=0.522 Sum_probs=29.9
Q ss_pred CCCCeEEEEEeccchHHHHHHHHHh-----hcccceeEEeccccc
Q 018952 131 GLGSKFYVVGFSMGGQVVWSCLKYI-----SHRLTGAALIAPVIN 170 (348)
Q Consensus 131 ~~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~~il~~~~~~ 170 (348)
|. .++.|||+|+|+.+.+...... -+.|..+++++++..
T Consensus 445 G~-RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 445 GN-RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred CC-CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 45 7999999999999988655421 235889999997654
No 250
>PRK12467 peptide synthase; Provisional
Probab=71.17 E-value=14 Score=42.64 Aligned_cols=98 Identities=9% Similarity=0.061 Sum_probs=65.4
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEec
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFS 142 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S 142 (348)
.+.++..|...++...+. .+...+... ..++.+..++.-.... ...++++++....+.+.......+..+.|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~---~l~~~l~~~--~~~~~l~~~~~~~d~~-~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s 3765 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYE---PLAVILEGD--RHVLGLTCRHLLDDGW-QDTSLQAMAVQYADYILWQQAKGPYGLLGWS 3765 (3956)
T ss_pred ccceeeechhhcchhhhH---HHHHHhCCC--CcEEEEeccccccccC-CccchHHHHHHHHHHHHHhccCCCeeeeeee
Confidence 356999999888877666 555545443 5678877766532221 2336677777777777666544689999999
Q ss_pred cchHHHHHHHHHh---hcccceeEEec
Q 018952 143 MGGQVVWSCLKYI---SHRLTGAALIA 166 (348)
Q Consensus 143 ~Gg~ia~~~a~~~---p~~v~~~il~~ 166 (348)
+||.++..++... .+.+.-+.++.
T Consensus 3766 ~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3766 LGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred cchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999999888642 34455555554
No 251
>PRK02399 hypothetical protein; Provisional
Probab=70.78 E-value=56 Score=28.34 Aligned_cols=97 Identities=14% Similarity=0.247 Sum_probs=57.7
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCcc------------------------chhhh
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKR------------------------TRKSL 119 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~------------------------~~~~~ 119 (348)
+.|+++ |...++..=. .++......+|..|+.+|.-..|....+.+. ..+.+
T Consensus 4 ~~I~ii-gT~DTK~~E~---~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M 79 (406)
T PRK02399 4 KRIYIA-GTLDTKGEEL---AYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAM 79 (406)
T ss_pred CEEEEE-eccCCcHHHH---HHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHH
Confidence 344444 4444443333 3455555566899999998444422111110 12334
Q ss_pred HHHHHHHHHHh----CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEe
Q 018952 120 ALDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALI 165 (348)
Q Consensus 120 ~~di~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~ 165 (348)
++-...+++.| ++ .-++-+|-|.|..++.......|--+-++++.
T Consensus 80 ~~ga~~~v~~L~~~g~i-~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 80 AEGAAAFVRELYERGDV-AGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHHHHHHHhcCCc-cEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 44444555443 35 57899999999999999888888666666654
No 252
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=69.58 E-value=5.3 Score=34.24 Aligned_cols=52 Identities=15% Similarity=0.081 Sum_probs=34.6
Q ss_pred EEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC--c----chHHHHHHHHh
Q 018952 287 VHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA--D----GMTEAIIKALL 340 (348)
Q Consensus 287 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e--p----~~~~~~i~~fl 340 (348)
+++|+|++|+..-... .+.+...++.+.+.||++|...+. | ++....|.+|-
T Consensus 354 mlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 354 MLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred EEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 9999999999863321 222233567888999999987662 3 34444555554
No 253
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=69.51 E-value=4.1 Score=19.20 Aligned_cols=15 Identities=33% Similarity=0.470 Sum_probs=10.0
Q ss_pred CchhHHHHHHHHHHH
Q 018952 1 MIREITVILLIGFVA 15 (348)
Q Consensus 1 m~~~~~~~~l~~~~~ 15 (348)
|+++|.++++.++.+
T Consensus 6 mmKkil~~l~a~~~L 20 (25)
T PF08139_consen 6 MMKKILFPLLALFML 20 (25)
T ss_pred HHHHHHHHHHHHHHH
Confidence 567887777666543
No 254
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=68.06 E-value=3.9 Score=34.30 Aligned_cols=30 Identities=20% Similarity=0.293 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHH
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~ 153 (348)
+.++++..|+ ++-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~Gi-~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGI-KPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTH-CESEEEESTTHHHHHHHHTT
T ss_pred hhhhhccccc-ccceeeccchhhHHHHHHCC
Confidence 4466677788 89999999999888776543
No 255
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=68.00 E-value=6.3 Score=32.61 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHH
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~ 153 (348)
+.++++.+|+ ++-.++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi-~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGV-RPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCC-cccEEEecCHHHHHHHHHhC
Confidence 3355677788 78899999999998877654
No 256
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=67.66 E-value=44 Score=31.39 Aligned_cols=62 Identities=15% Similarity=0.032 Sum_probs=35.9
Q ss_pred CchhhhhhhcccHHHHhhcCcEEEEEcCCC---CCCCCCCCc---cc----hhhhHHHHHHHHHHhCCCCeEEEEE
Q 018952 75 SRHDAAIAANLSPEVVDELGIYIVSFDRPG---YGESDPDPK---RT----RKSLALDIEELADQLGLGSKFYVVG 140 (348)
Q Consensus 75 ~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G---~G~S~~~~~---~~----~~~~~~di~~~l~~l~~~~~~~lvG 140 (348)
+...+. .++..|.+. ||++|.+|-.- .|....+.. -| +.+..+.+.-+|+..+..--+.++|
T Consensus 70 spe~Fe---~qL~~Lk~n-GY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~PILkkygvpATfFlvg 141 (671)
T PRK14582 70 RTSALR---EQFAWLREN-GYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFPILQAFQWPAVWAPVG 141 (671)
T ss_pred CHHHHH---HHHHHHHHC-cCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHHHHHHcCCCEEEEEec
Confidence 345666 777777765 99999987321 122211111 12 3345566788889988843444554
No 257
>PLN02748 tRNA dimethylallyltransferase
Probab=67.21 E-value=20 Score=31.83 Aligned_cols=77 Identities=18% Similarity=0.184 Sum_probs=49.2
Q ss_pred CCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcC----CCC--CCCCC------------------CCccch
Q 018952 61 LAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDR----PGY--GESDP------------------DPKRTR 116 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~----~G~--G~S~~------------------~~~~~~ 116 (348)
..++.+|+|-|-.+++.. .+...++...+..||..|- +|. |...+ ...++.
T Consensus 19 ~~~~~~i~i~GptgsGKs-----~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv 93 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGKS-----KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTA 93 (468)
T ss_pred CCCCCEEEEECCCCCCHH-----HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcH
Confidence 345667888887776655 3346777776777888883 332 22211 123688
Q ss_pred hhhHHHHHHHHHHhC-CCCeEEEEEec
Q 018952 117 KSLALDIEELADQLG-LGSKFYVVGFS 142 (348)
Q Consensus 117 ~~~~~di~~~l~~l~-~~~~~~lvG~S 142 (348)
.++.++....++.+. -++-.+|||.|
T Consensus 94 ~~F~~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 94 KDFRDHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEcCh
Confidence 889999888888763 23456777654
No 258
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=66.89 E-value=79 Score=27.50 Aligned_cols=97 Identities=11% Similarity=0.185 Sum_probs=59.2
Q ss_pred eEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCcc------------------------chhhhH
Q 018952 65 KIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKR------------------------TRKSLA 120 (348)
Q Consensus 65 ~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~------------------------~~~~~~ 120 (348)
+|+++--+-.-..... ++.....+.|..++.+|.-=.|.+..+.+. ..+.++
T Consensus 3 tI~iigT~DTK~~E~~----yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~ 78 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELL----YLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMA 78 (403)
T ss_pred EEEEEEccCCCHHHHH----HHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHH
Confidence 4555544443344443 445555557999999997555544432211 122333
Q ss_pred HHHHHHHHHh----CCCCeEEEEEeccchHHHHHHHHHhhcccceeEEec
Q 018952 121 LDIEELADQL----GLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIA 166 (348)
Q Consensus 121 ~di~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~ 166 (348)
+-...++..+ .+ .-++-+|-|.|..++.......|=-+-++++.-
T Consensus 79 ~ga~~~v~~l~~~g~i-~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST 127 (403)
T PF06792_consen 79 RGAARFVSDLYDEGKI-DGVIGIGGSGGTALATAAMRALPIGFPKLMVST 127 (403)
T ss_pred HHHHHHHHHHHhcCCc-cEEEEecCCccHHHHHHHHHhCCCCCCeEEEEc
Confidence 3444455444 24 568899999999999999888887676766543
No 259
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=65.22 E-value=26 Score=27.12 Aligned_cols=65 Identities=14% Similarity=0.185 Sum_probs=46.4
Q ss_pred cCc-EEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEecc----chHHHHHHHHHhh-cccceeEEe
Q 018952 93 LGI-YIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSM----GGQVVWSCLKYIS-HRLTGAALI 165 (348)
Q Consensus 93 ~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~----Gg~ia~~~a~~~p-~~v~~~il~ 165 (348)
+|. +|+..|.++.. .++.+.+++.+.++++..+. .++++|+|. |..++-++|++.. ..+..++-+
T Consensus 75 ~G~d~V~~~~~~~~~------~~~~e~~a~al~~~i~~~~p--~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 75 MGADRAILVSDRAFA------GADTLATAKALAAAIKKIGV--DLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred cCCCEEEEEeccccc------CCChHHHHHHHHHHHHHhCC--CEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 355 67777766432 34778899999999988764 799999998 8889999988643 234444433
No 260
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=64.77 E-value=7.9 Score=32.02 Aligned_cols=30 Identities=17% Similarity=-0.035 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHH
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~ 153 (348)
+.++++..|+ ++..++|||+|=..|+.++.
T Consensus 66 l~~~l~~~g~-~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLP-RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCC-CCcEEeecCHHHHHHHHHhC
Confidence 3455566788 79999999999988887664
No 261
>PRK03147 thiol-disulfide oxidoreductase; Provisional
Probab=62.21 E-value=34 Score=25.40 Aligned_cols=57 Identities=12% Similarity=0.118 Sum_probs=26.9
Q ss_pred cceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCC-chhhhhhhcccHHHHhh---cCcEEEEEcCC
Q 018952 39 APRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSS-RHDAAIAANLSPEVVDE---LGIYIVSFDRP 103 (348)
Q Consensus 39 ~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~-~~~~~~~~~~~~~l~~~---~g~~vi~~D~~ 103 (348)
...+...+|..+...... .++.+|.+....+. ..... +.+..+.++ .++.++.++.-
T Consensus 43 ~~~~~~~~g~~~~l~~~~-----~k~~~l~f~a~~C~~C~~~~---~~l~~~~~~~~~~~~~vi~i~~d 103 (173)
T PRK03147 43 NFVLTDLEGKKIELKDLK-----GKGVFLNFWGTWCKPCEKEM---PYMNELYPKYKEKGVEIIAVNVD 103 (173)
T ss_pred CcEeecCCCCEEeHHHcC-----CCEEEEEEECCcCHHHHHHH---HHHHHHHHHhhcCCeEEEEEEcC
Confidence 344555677766554432 24566655533222 11111 223333332 25778888653
No 262
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=61.04 E-value=10 Score=31.54 Aligned_cols=32 Identities=16% Similarity=0.086 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHHHh
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
+.+.++..|+ ..-.++|-|+|+.++..+|..+
T Consensus 33 vL~aLee~gi-~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGI-PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCC
Confidence 4555566687 5678899999999999999763
No 263
>PRK10279 hypothetical protein; Provisional
Probab=60.50 E-value=11 Score=31.16 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhh
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
+.+.++..++ ..-.+.|-|+|+.++..+|....
T Consensus 23 VL~aL~E~gi-~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGI-EIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCC-CcCEEEEEcHHHHHHHHHHcCCh
Confidence 4455556788 67799999999999999997543
No 264
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=60.13 E-value=11 Score=28.12 Aligned_cols=32 Identities=16% Similarity=-0.007 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHHHh
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
+.+.++..++ ..-.+.|-|.|+.++..++...
T Consensus 16 vl~aL~e~gi-~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 16 VAKALRERGP-LIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCC
Confidence 3344445577 5778999999999999998754
No 265
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=59.60 E-value=84 Score=29.61 Aligned_cols=63 Identities=16% Similarity=0.081 Sum_probs=38.6
Q ss_pred CchhhhhhhcccHHHHhhcCcEEEEEcCC-C--CCCCCCCC-------ccchhhhHHHHHHHHHHhCCCCeEEEEEe
Q 018952 75 SRHDAAIAANLSPEVVDELGIYIVSFDRP-G--YGESDPDP-------KRTRKSLALDIEELADQLGLGSKFYVVGF 141 (348)
Q Consensus 75 ~~~~~~~~~~~~~~l~~~~g~~vi~~D~~-G--~G~S~~~~-------~~~~~~~~~di~~~l~~l~~~~~~~lvG~ 141 (348)
+...+. .++..|.+. ||+++.+|-. . .|....+. +..+.+..+.+.-+++..+...-+.++|.
T Consensus 70 spe~Fe---~QL~~Lk~n-GY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlPILKkyg~pATfFvVg~ 142 (672)
T PRK14581 70 RSSALN---EQFVWLRDN-GYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYPLLKAYKWSAVLAPVGT 142 (672)
T ss_pred CHHHHH---HHHHHHHHC-cCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHHHHHHcCCCEEEEEech
Confidence 345666 777777765 9999998732 1 12222111 12344567778889999998445666664
No 266
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=58.84 E-value=11 Score=31.07 Aligned_cols=28 Identities=18% Similarity=0.200 Sum_probs=21.8
Q ss_pred HHHHHhC-CCCeEEEEEeccchHHHHHHHH
Q 018952 125 ELADQLG-LGSKFYVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 125 ~~l~~l~-~~~~~~lvG~S~Gg~ia~~~a~ 153 (348)
..++..+ + .+-.++|||+|=+.|+.++.
T Consensus 74 ~~l~~~g~i-~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 74 LKLKEQGGL-KPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHcCCC-CCCEEeecCHHHHHHHHHhC
Confidence 4445566 8 78899999999988877664
No 267
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=58.15 E-value=14 Score=29.03 Aligned_cols=30 Identities=23% Similarity=0.101 Sum_probs=22.8
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHHHHHHh
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
+.++..++ +.-.++|-|.|+.++..+|...
T Consensus 20 ~aL~e~gi-~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGL-EPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCC-CceEEEEeCHHHHHHHHHHcCC
Confidence 33444566 5668999999999999998744
No 268
>COG2069 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=58.05 E-value=1.1e+02 Score=25.29 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=37.4
Q ss_pred HHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEecc
Q 018952 87 PEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSM 143 (348)
Q Consensus 87 ~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~ 143 (348)
+.-.+++|.+.+++.+.+.+- .-.+....+.++.++++++..+.. +++|.|-
T Consensus 157 rk~Vk~fgadmvTiHlIsTdP--ki~D~p~~EAak~lEdvLqAVdvP---iiiGGSG 208 (403)
T COG2069 157 RKCVKKFGADMVTIHLISTDP--KIKDTPAKEAAKTLEDVLQAVDVP---IIIGGSG 208 (403)
T ss_pred HHHHHHhCCceEEEEeecCCc--cccCCCHHHHHHHHHHHHHhcCcC---EEecCCC
Confidence 555566788899998886532 223447788999999999998762 6677663
No 269
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=56.98 E-value=14 Score=28.27 Aligned_cols=30 Identities=20% Similarity=0.079 Sum_probs=22.8
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHHHHHHh
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
+.++..++ ..=.++|-|.||.++..++..+
T Consensus 19 ~~L~e~~~-~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEAGI-LKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHcCC-CcceEEEECHHHHHHHHHHcCC
Confidence 33444566 5678999999999999998743
No 270
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=56.82 E-value=35 Score=28.98 Aligned_cols=52 Identities=27% Similarity=0.388 Sum_probs=34.1
Q ss_pred ccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEE
Q 018952 85 LSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 139 (348)
Q Consensus 85 ~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 139 (348)
+...+++++||.|+.+-+.-+.. +.....+..+...|...+.+.||+ +.+++
T Consensus 18 VaA~lLk~QGyeViGl~m~~~~~-~~~~~C~s~~d~~da~~va~~LGI--p~~~v 69 (356)
T COG0482 18 VAAYLLKEQGYEVIGLFMKNWDE-DGGGGCCSEEDLRDAERVADQLGI--PLYVV 69 (356)
T ss_pred HHHHHHHHcCCeEEEEEEEeecc-CCCCcCCchhHHHHHHHHHHHhCC--ceEEE
Confidence 34567777899999998877654 222223445566777888888876 44444
No 271
>COG3933 Transcriptional antiterminator [Transcription]
Probab=56.45 E-value=63 Score=28.34 Aligned_cols=75 Identities=15% Similarity=0.265 Sum_probs=56.0
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEecc
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSM 143 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~ 143 (348)
..||+.||...-+.. . .++.+|... --+.++|+| -+.++.+..+.+.+.+++... .+=.++=.+|
T Consensus 110 ~vIiiAHG~sTASSm-a---evanrLL~~--~~~~aiDMP--------Ldvsp~~vle~l~e~~k~~~~-~~GlllLVDM 174 (470)
T COG3933 110 KVIIIAHGYSTASSM-A---EVANRLLGE--EIFIAIDMP--------LDVSPSDVLEKLKEYLKERDY-RSGLLLLVDM 174 (470)
T ss_pred eEEEEecCcchHHHH-H---HHHHHHhhc--cceeeecCC--------CcCCHHHHHHHHHHHHHhcCc-cCceEEEEec
Confidence 578899998765444 3 577888876 348899987 345888999999999999877 4545666799
Q ss_pred chHHHHHHHH
Q 018952 144 GGQVVWSCLK 153 (348)
Q Consensus 144 Gg~ia~~~a~ 153 (348)
|+..++.=..
T Consensus 175 GSL~~f~~~i 184 (470)
T COG3933 175 GSLTSFGSII 184 (470)
T ss_pred chHHHHHHHH
Confidence 9988765443
No 272
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=55.45 E-value=9.7 Score=34.44 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=29.4
Q ss_pred eEEEEEeccchHHHHHHHHHh-hcccceeEEecccccc
Q 018952 135 KFYVVGFSMGGQVVWSCLKYI-SHRLTGAALIAPVINY 171 (348)
Q Consensus 135 ~~~lvG~S~Gg~ia~~~a~~~-p~~v~~~il~~~~~~~ 171 (348)
.++.-+.|-||..++..|.+. ...|++++...|....
T Consensus 286 ~VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNL 323 (690)
T ss_pred EEEEEeecCccHHHHhHhhcccCCceeeEEecCCccCC
Confidence 456668999999999999864 3479999999887654
No 273
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=55.25 E-value=14 Score=30.82 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHHHh
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
+.+.++..++ +.-.+.|-|+|+.++..+|..+
T Consensus 29 Vl~aL~e~gi-~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGI-PIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCC-CccEEEecCHHHHHHHHHHcCC
Confidence 5566677777 7889999999999999999853
No 274
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=55.21 E-value=17 Score=29.67 Aligned_cols=31 Identities=19% Similarity=0.113 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHHH
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
+.+.+++.++ .-=.+.|-|+|+.++..+|..
T Consensus 28 VL~aLeE~gi-~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAGI-PIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcCC-CccEEEEECHHHHHHHHHHcC
Confidence 4455566687 566889999999999999875
No 275
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=55.17 E-value=8.9 Score=28.24 Aligned_cols=49 Identities=22% Similarity=0.405 Sum_probs=30.0
Q ss_pred EEEcCCCCCCCCCC----CccchhhhHHHH----HHHHHHhCC---CCeEEEEEeccchH
Q 018952 98 VSFDRPGYGESDPD----PKRTRKSLALDI----EELADQLGL---GSKFYVVGFSMGGQ 146 (348)
Q Consensus 98 i~~D~~G~G~S~~~----~~~~~~~~~~di----~~~l~~l~~---~~~~~lvG~S~Gg~ 146 (348)
+-+-+-|||+.... ..++.+++++-+ ..+.+..+. ++++.|+|-|++..
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 44556689887321 245888888888 455555432 37999999999987
No 276
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=55.06 E-value=33 Score=28.52 Aligned_cols=93 Identities=17% Similarity=0.146 Sum_probs=51.4
Q ss_pred CCceEEEEcCCCCC--chhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCC---------c--------cchh-hhHH
Q 018952 62 AKYKIIFVHGFGSS--RHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDP---------K--------RTRK-SLAL 121 (348)
Q Consensus 62 ~~~~vl~~hG~~~~--~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~---------~--------~~~~-~~~~ 121 (348)
.+..|+++-|.... ...+.-+-.+...+...-+-+++++=.+|.|.-.-.. . .++. .+.+
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 35667777775421 1111100022334443236677777777877653211 0 1111 2223
Q ss_pred HHHHHHHHhCCCCeEEEEEeccchHHHHHHHHH
Q 018952 122 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 122 di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
...-++++...+++|+++|+|-|+.+|--+|..
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 344455666777899999999999999877764
No 277
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=54.39 E-value=12 Score=26.21 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=17.0
Q ss_pred CCCceEEEEcCCCCCchhhh
Q 018952 61 LAKYKIIFVHGFGSSRHDAA 80 (348)
Q Consensus 61 ~~~~~vl~~hG~~~~~~~~~ 80 (348)
..+|.|+-+||++|++..+-
T Consensus 50 p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCEEEEeecCCCCcHHHH
Confidence 45788999999999988875
No 278
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=53.25 E-value=19 Score=27.88 Aligned_cols=64 Identities=20% Similarity=0.320 Sum_probs=33.1
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEE--EEEcCCCCCCCCCCCccchhhhHHHHHHHHHH
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYI--VSFDRPGYGESDPDPKRTRKSLALDIEELADQ 129 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~v--i~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~ 129 (348)
.++|++++||.....-.......+...|.+. |..+ +.+.--|||.... ....++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~-g~~~~~~~~p~~gH~~~~~---~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA-GKPVELLIFPGEGHGFGNP---ENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT-TSSEEEEEETT-SSSTTSH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc-CCCEEEEEcCcCCCCCCCc---hhHHHHHHHHHHHHHH
Confidence 4689999999876433222111445555543 5544 4444445544422 1233555556666554
No 279
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=52.57 E-value=30 Score=28.18 Aligned_cols=52 Identities=21% Similarity=0.245 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHHhCC--CCeEEEEEeccchHHHHHHH---HHhhcccceeEEecccc
Q 018952 118 SLALDIEELADQLGL--GSKFYVVGFSMGGQVVWSCL---KYISHRLTGAALIAPVI 169 (348)
Q Consensus 118 ~~~~di~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a---~~~p~~v~~~il~~~~~ 169 (348)
.+.+.+.+-++.+-. ..|+++.|.|+|+.-+...- ...-+++++.+..+|..
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 334444444555532 25899999999988765543 23345799999999864
No 280
>PRK09810 entericidin A; Provisional
Probab=51.92 E-value=19 Score=19.48 Aligned_cols=13 Identities=23% Similarity=0.631 Sum_probs=8.4
Q ss_pred CchhHHHHHHHHH
Q 018952 1 MIREITVILLIGF 13 (348)
Q Consensus 1 m~~~~~~~~l~~~ 13 (348)
||+++..+++++.
T Consensus 1 mMkk~~~l~~~~~ 13 (41)
T PRK09810 1 MMKRLIVLVLLAS 13 (41)
T ss_pred ChHHHHHHHHHHH
Confidence 7777777665444
No 281
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=50.69 E-value=48 Score=25.05 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=35.2
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCC--CCCCCCCCccchhhhHHHHHHH
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPG--YGESDPDPKRTRKSLALDIEEL 126 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G--~G~S~~~~~~~~~~~~~di~~~ 126 (348)
.++.+|++-|+++++..-- +..+.+.|.+ .|++++..|=-. ||.+.. -+++-++-.+.+..+
T Consensus 21 ~~~~viW~TGLSGsGKSTi-A~ale~~L~~-~G~~~y~LDGDnvR~gL~~d-LgFs~edR~eniRRv 84 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTI-ANALEEKLFA-KGYHVYLLDGDNVRHGLNRD-LGFSREDRIENIRRV 84 (197)
T ss_pred CCCeEEEeecCCCCCHHHH-HHHHHHHHHH-cCCeEEEecChhHhhcccCC-CCCChHHHHHHHHHH
Confidence 3678999999998765532 0133344444 599999998422 344321 123444544444443
No 282
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=50.40 E-value=22 Score=26.68 Aligned_cols=29 Identities=17% Similarity=0.058 Sum_probs=22.4
Q ss_pred HHHHhCCCCeEEEEEeccchHHHHHHHHHh
Q 018952 126 LADQLGLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 126 ~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
.++..+. ..=.+.|-|.|+.++..++...
T Consensus 21 ~L~e~g~-~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 21 ALEEEGI-EIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHCCC-CeeEEEEeCHHHHHHHHHHcCC
Confidence 3344566 5678999999999999888754
No 283
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=49.85 E-value=1.2e+02 Score=23.40 Aligned_cols=65 Identities=18% Similarity=0.171 Sum_probs=43.5
Q ss_pred CcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhh--cccceeEEec
Q 018952 94 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS--HRLTGAALIA 166 (348)
Q Consensus 94 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~~il~~ 166 (348)
+++++.+|-+|... .-.+..+.+..+++.... ..++++=-+..+.-.+..+..+- -.++++|+.-
T Consensus 83 ~~D~vlIDT~Gr~~-------~d~~~~~el~~~~~~~~~-~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlTK 149 (196)
T PF00448_consen 83 GYDLVLIDTAGRSP-------RDEELLEELKKLLEALNP-DEVHLVLSATMGQEDLEQALAFYEAFGIDGLILTK 149 (196)
T ss_dssp TSSEEEEEE-SSSS-------THHHHHHHHHHHHHHHSS-SEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEES
T ss_pred CCCEEEEecCCcch-------hhHHHHHHHHHHhhhcCC-ccceEEEecccChHHHHHHHHHhhcccCceEEEEe
Confidence 68999999998632 234567778888888866 67777766666666665554432 2478888654
No 284
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=49.45 E-value=38 Score=20.97 Aligned_cols=32 Identities=19% Similarity=0.415 Sum_probs=21.7
Q ss_pred CceEEEEcCCC-CCchhhhhhhcccHHHHhhcCcEEEEE
Q 018952 63 KYKIIFVHGFG-SSRHDAAIAANLSPEVVDELGIYIVSF 100 (348)
Q Consensus 63 ~~~vl~~hG~~-~~~~~~~~~~~~~~~l~~~~g~~vi~~ 100 (348)
.|.++++||.. ...+. ++...++++|..++.+
T Consensus 31 ~~~~~lvhGga~~GaD~------iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGADR------IAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCCCCHHH------HHHHHHHHCCCeeEEe
Confidence 47788999977 44443 3477777778766654
No 285
>PRK11627 hypothetical protein; Provisional
Probab=48.90 E-value=74 Score=24.44 Aligned_cols=19 Identities=21% Similarity=0.272 Sum_probs=12.3
Q ss_pred CchhHHHHHHHHHHHHHhh
Q 018952 1 MIREITVILLIGFVAWAYQ 19 (348)
Q Consensus 1 m~~~~~~~~l~~~~~~~~~ 19 (348)
|++++.+.++.++++..+.
T Consensus 1 mlkklll~l~a~~~L~gCA 19 (192)
T PRK11627 1 MLKKILFPLVALFMLAGCA 19 (192)
T ss_pred ChHHHHHHHHHHHHHHhhc
Confidence 8888888776555444444
No 286
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=48.28 E-value=23 Score=27.75 Aligned_cols=33 Identities=12% Similarity=-0.023 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhh
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
+.+.+...+. ..-.+.|.|.|+.++..+|...+
T Consensus 16 vl~aL~e~g~-~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGI-EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCc
Confidence 3344455566 56689999999999999998754
No 287
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=48.22 E-value=59 Score=26.59 Aligned_cols=69 Identities=19% Similarity=0.340 Sum_probs=44.0
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCC--------CCCC-------CCCCcc-chhhhHHHHHHH
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPG--------YGES-------DPDPKR-TRKSLALDIEEL 126 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G--------~G~S-------~~~~~~-~~~~~~~di~~~ 126 (348)
-|.|+|.-|.++ .+++++.. ||+|+..|+-- .|.. ++..-| +.+.+.+-+.+.
T Consensus 252 vPmi~fakG~g~----------~Le~l~~t-G~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~m 320 (359)
T KOG2872|consen 252 VPMILFAKGSGG----------ALEELAQT-GYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQM 320 (359)
T ss_pred CceEEEEcCcch----------HHHHHHhc-CCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHH
Confidence 477888887653 34667665 99999999841 1211 111112 677888889999
Q ss_pred HHHhCCCCeEEEEEec
Q 018952 127 ADQLGLGSKFYVVGFS 142 (348)
Q Consensus 127 l~~l~~~~~~~lvG~S 142 (348)
++..|...-+.=+||.
T Consensus 321 v~~fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 321 VKDFGKSRYIANLGHG 336 (359)
T ss_pred HHHhCccceEEecCCC
Confidence 9998873344445664
No 288
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=47.97 E-value=1.4e+02 Score=24.54 Aligned_cols=64 Identities=11% Similarity=0.095 Sum_probs=40.7
Q ss_pred CcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEE-eccchHHHHHHHHHh-hcccceeEEe
Q 018952 94 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVG-FSMGGQVVWSCLKYI-SHRLTGAALI 165 (348)
Q Consensus 94 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG-~S~Gg~ia~~~a~~~-p~~v~~~il~ 165 (348)
+++++.+|-+|....+ .+..+.+.++++.... ..++++- -++++.-+...+..+ +-.++++|+.
T Consensus 154 ~~D~ViIDt~Gr~~~~-------~~~l~el~~~~~~~~~-~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 154 RVDYILIDTAGKNYRA-------SETVEEMIETMGQVEP-DYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred CCCEEEEECCCCCcCC-------HHHHHHHHHHHhhhCC-CeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 6889999999864322 2345555566665555 4555544 567787777777765 3457777764
No 289
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=47.05 E-value=57 Score=27.26 Aligned_cols=72 Identities=22% Similarity=0.202 Sum_probs=42.6
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCC------CCCCCCC------------------Cccchhh
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPG------YGESDPD------------------PKRTRKS 118 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G------~G~S~~~------------------~~~~~~~ 118 (348)
.+.++++-|-.+++.. .+...+++..+..++..|-.- +|...+. ..++..+
T Consensus 3 ~~~~i~i~GptgsGKt-----~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~ 77 (307)
T PRK00091 3 KPKVIVIVGPTASGKT-----ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVAD 77 (307)
T ss_pred CceEEEEECCCCcCHH-----HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHH
Confidence 3467788887776655 345677777677788777631 1222111 1246677
Q ss_pred hHHHHHHHHHHhC-CCCeEEEE
Q 018952 119 LALDIEELADQLG-LGSKFYVV 139 (348)
Q Consensus 119 ~~~di~~~l~~l~-~~~~~~lv 139 (348)
+.++....++.+. .++..+++
T Consensus 78 f~~~a~~~i~~i~~~gk~pIlv 99 (307)
T PRK00091 78 FQRDALAAIADILARGKLPILV 99 (307)
T ss_pred HHHHHHHHHHHHHhCCCCEEEE
Confidence 8888777777652 22345555
No 290
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=46.94 E-value=11 Score=32.94 Aligned_cols=35 Identities=14% Similarity=-0.009 Sum_probs=25.3
Q ss_pred HHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhccc
Q 018952 124 EELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRL 159 (348)
Q Consensus 124 ~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v 159 (348)
.+.+...++ .+-++.|-|.|+.+|..++...++.+
T Consensus 92 LkaL~E~gl-~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 92 LKALFEANL-LPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 334444466 45589999999999999998655553
No 291
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=46.62 E-value=98 Score=25.09 Aligned_cols=88 Identities=23% Similarity=0.334 Sum_probs=48.9
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCC----------CCC-cc--------chhhhHHH
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESD----------PDP-KR--------TRKSLALD 122 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~----------~~~-~~--------~~~~~~~d 122 (348)
.-|.+++.||+++....-. .....+... ++.++..+...+|.+. ... .. .......+
T Consensus 48 ~~p~v~~~h~~~~~~~~~~---~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSL---GYAVLLAEK-GYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKD 123 (299)
T ss_pred cCceEEeccCccccccCcc---hHHHHhhhc-eeEEeeeccccccccccccccccCccccccccchhheeeeccccccHH
Confidence 4678999999999887755 433444443 6777777652222222 100 00 00111111
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhh
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
....... ..+....|+++|+..+..++...+
T Consensus 124 ~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 124 YRLLGAS---LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHHHhhh---cCcceEEEEEeeccchHHHhhcch
Confidence 1111111 257888889988888888887665
No 292
>PRK11901 hypothetical protein; Reviewed
Probab=46.62 E-value=32 Score=28.55 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=20.5
Q ss_pred CchhHHHHHHHHHHHHHhhccCCCCCCCCC
Q 018952 1 MIREITVILLIGFVAWAYQATCPPPPNVCG 30 (348)
Q Consensus 1 m~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 30 (348)
||-.|-+|+|+++++.+.+.++.|......
T Consensus 38 ~MiGiGilVLlLLIi~IgSALksP~~~~~~ 67 (327)
T PRK11901 38 MMIGIGILVLLLLIIAIGSALKSPTEHESQ 67 (327)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCccc
Confidence 556677777777777788887776544433
No 293
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=46.12 E-value=24 Score=31.32 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=40.0
Q ss_pred cEEEEEeCCCCCCChHHHHHHHhhC------CCceEEEeCCCCcceeeC-cchHHHHHHHHhcc
Q 018952 286 SVHLWQGDEDRLVPVILQRYISKKL------PWIRYHEIPGSGHLIADA-DGMTEAIIKALLLG 342 (348)
Q Consensus 286 Pvl~i~G~~D~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 342 (348)
+++..+|-.|..+|.-.++.-.+.+ ++..+..+-.+||++..+ |+...+.+..|+..
T Consensus 427 kw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 427 KWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred eEeeecchhhhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 3777788888888766654433333 233444444589999887 99999999988865
No 294
>PRK14974 cell division protein FtsY; Provisional
Probab=45.94 E-value=1.7e+02 Score=24.87 Aligned_cols=67 Identities=16% Similarity=0.199 Sum_probs=45.1
Q ss_pred hcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhh--cccceeEEec
Q 018952 92 ELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS--HRLTGAALIA 166 (348)
Q Consensus 92 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~~il~~ 166 (348)
..|++++.+|-.|.... -.++.+.+..+.+.++. ..+++|.-+.-|.-+..-+..+. -.+.++|+.-
T Consensus 220 ~~~~DvVLIDTaGr~~~-------~~~lm~eL~~i~~~~~p-d~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlTK 288 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHT-------DANLMDELKKIVRVTKP-DLVIFVGDALAGNDAVEQAREFNEAVGIDGVILTK 288 (336)
T ss_pred hCCCCEEEEECCCccCC-------cHHHHHHHHHHHHhhCC-ceEEEeeccccchhHHHHHHHHHhcCCCCEEEEee
Confidence 34788999999876432 23556667777776766 57778877777776666665443 3577777653
No 295
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=45.76 E-value=22 Score=32.26 Aligned_cols=31 Identities=23% Similarity=0.562 Sum_probs=24.3
Q ss_pred HHHH-HHhCCCCeEEEEEeccchHHHHHHHHHh
Q 018952 124 EELA-DQLGLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 124 ~~~l-~~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
.+++ +..|+ ++-.++|||+|=..|+..|.-.
T Consensus 255 a~ll~~~~GI-~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAI-KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCC-CCCEEeecCHHHHHHHHHhCCC
Confidence 3445 57788 7889999999999888877643
No 296
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=45.74 E-value=57 Score=20.57 Aligned_cols=22 Identities=23% Similarity=0.182 Sum_probs=18.6
Q ss_pred CeEEEEEeccchHHHHHHHHHh
Q 018952 134 SKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
+++-++|-|.|=.+|.+.++.+
T Consensus 40 K~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHH
T ss_pred ceEEEEecCCcccHHHHHHHHh
Confidence 7999999999999998888765
No 297
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=45.61 E-value=38 Score=25.36 Aligned_cols=29 Identities=21% Similarity=0.075 Sum_probs=22.0
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHHHHHH
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~ 154 (348)
+.++..+. ..-.+.|-|.|+.++..++..
T Consensus 20 ~~L~~~~~-~~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 20 KALEEAGI-PIDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHcCC-CeeEEEEECHHHHHHHHHHcC
Confidence 33444566 566899999999999998864
No 298
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=45.15 E-value=46 Score=23.08 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=33.9
Q ss_pred EEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHh
Q 018952 67 IFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQL 130 (348)
Q Consensus 67 l~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l 130 (348)
|++||-+|++...- +..+++..++.++.+|..-...+ ...+..+.+..+++..
T Consensus 1 ill~G~~G~GKT~l-----~~~la~~l~~~~~~i~~~~~~~~------~~~~~~~~i~~~~~~~ 53 (132)
T PF00004_consen 1 ILLHGPPGTGKTTL-----ARALAQYLGFPFIEIDGSELISS------YAGDSEQKIRDFFKKA 53 (132)
T ss_dssp EEEESSTTSSHHHH-----HHHHHHHTTSEEEEEETTHHHTS------STTHHHHHHHHHHHHH
T ss_pred CEEECcCCCCeeHH-----HHHHHhhcccccccccccccccc------cccccccccccccccc
Confidence 68899888877754 57777777888888887654311 2233444455555543
No 299
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=44.84 E-value=1.3e+02 Score=25.97 Aligned_cols=87 Identities=17% Similarity=0.197 Sum_probs=57.7
Q ss_pred CceEEEEcCCC-------CCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCe
Q 018952 63 KYKIIFVHGFG-------SSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSK 135 (348)
Q Consensus 63 ~~~vl~~hG~~-------~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~ 135 (348)
...||++||-. -+...|. .+++-+.++ |. +-.+|.--.|..+ .+++-+.-++.++... +
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~---~l~~~~~~r-~l-ip~~D~AYQGF~~-----GleeDa~~lR~~a~~~----~ 236 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQ---ELADLIKER-GL-IPFFDIAYQGFAD-----GLEEDAYALRLFAEVG----P 236 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHH---HHHHHHHHc-CC-eeeeehhhhhhcc-----chHHHHHHHHHHHHhC----C
Confidence 45799999755 3567888 776666654 53 6778876665554 2444455555555432 2
Q ss_pred EEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 136 FYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 136 ~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
-.+|..|+.=..++ |.+||-++.+++..
T Consensus 237 ~~lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 237 ELLVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred cEEEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 38888888766664 77999999999753
No 300
>PF03283 PAE: Pectinacetylesterase
Probab=44.57 E-value=94 Score=26.74 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=24.3
Q ss_pred CCeEEEEEeccchHHHHHHHH----HhhcccceeEEeccc
Q 018952 133 GSKFYVVGFSMGGQVVWSCLK----YISHRLTGAALIAPV 168 (348)
Q Consensus 133 ~~~~~lvG~S~Gg~ia~~~a~----~~p~~v~~~il~~~~ 168 (348)
.++++|.|.|.||.-++..+. ..|..++-..+.++.
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 378999999999998887654 345444444444443
No 301
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=44.53 E-value=15 Score=31.72 Aligned_cols=40 Identities=13% Similarity=-0.026 Sum_probs=28.2
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeE
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAA 163 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~i 163 (348)
+.+.+...|+ .+-++.|-|.|+.+|..+|..-++.+..++
T Consensus 101 v~kaL~e~gl-~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGL-LPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCC-CCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3444455577 566799999999999999986555444433
No 302
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=43.92 E-value=14 Score=32.17 Aligned_cols=37 Identities=16% Similarity=-0.015 Sum_probs=26.7
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHHHHHHhhccccee
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGA 162 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~ 162 (348)
+.+...++ .+=++.|-|.|+.+|..+|...++.+..+
T Consensus 87 kaL~e~gl-lp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 87 KALLDADL-LPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHhCCC-CCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 33334466 56679999999999999998666655444
No 303
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.; GO: 0016740 transferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 2DET_A 2DER_A 2DEU_A 2HMA_A.
Probab=43.02 E-value=26 Score=29.93 Aligned_cols=54 Identities=20% Similarity=0.374 Sum_probs=33.8
Q ss_pred cccHHHHhhcCcEEEEEcCCCCCCCCCCC-ccchhhhHHHHHHHHHHhCCCCeEEEE
Q 018952 84 NLSPEVVDELGIYIVSFDRPGYGESDPDP-KRTRKSLALDIEELADQLGLGSKFYVV 139 (348)
Q Consensus 84 ~~~~~l~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~di~~~l~~l~~~~~~~lv 139 (348)
.+...|++++||+|+.+-++-+...+... .....+..+|...+.++|++ +.+++
T Consensus 14 svaA~LLk~~G~~V~Gv~m~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI--p~~v~ 68 (356)
T PF03054_consen 14 SVAAALLKEQGYDVIGVTMRNWDEEDESGKSCCSEEDIEDARRVAEKLGI--PHYVV 68 (356)
T ss_dssp HHHHHHHHHCT-EEEEEEEE-SS-SSSHH-HHHHHHHHHHHHHHHHHHT----EEEE
T ss_pred HHHHHHHHhhcccceEEEEEEeccccccCCCCCchhhHHHHHHHHHhcCC--CEEEE
Confidence 34577888889999999888765543221 12345667888899999988 45544
No 304
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=42.26 E-value=16 Score=30.47 Aligned_cols=32 Identities=16% Similarity=0.013 Sum_probs=23.2
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHHHHHHhhc
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH 157 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 157 (348)
+.+...++ .+-++.|-|.|+.+|..++...++
T Consensus 88 kaL~e~gl-~p~~i~GsSaGAivaa~~~~~t~~ 119 (323)
T cd07231 88 RTLVEHQL-LPRVIAGSSVGSIVCAIIATRTDE 119 (323)
T ss_pred HHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHH
Confidence 33444476 556799999999999998875443
No 305
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.96 E-value=73 Score=28.38 Aligned_cols=89 Identities=19% Similarity=0.251 Sum_probs=55.9
Q ss_pred EEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchH
Q 018952 67 IFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQ 146 (348)
Q Consensus 67 l~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ 146 (348)
+|--|+|.+...-. ..+-..+++.||+|+.+|--|--... ..+...+..+++.-.. +.+..||--+=|.
T Consensus 442 lfekGYgkd~a~va---k~AI~~a~~~gfDVvLiDTAGR~~~~-------~~lm~~l~k~~~~~~p-d~i~~vgealvg~ 510 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVA---KEAIQEARNQGFDVVLIDTAGRMHNN-------APLMTSLAKLIKVNKP-DLILFVGEALVGN 510 (587)
T ss_pred HHhhhcCCChHHHH---HHHHHHHHhcCCCEEEEeccccccCC-------hhHHHHHHHHHhcCCC-ceEEEehhhhhCc
Confidence 34446665544433 44555666779999999988743322 3356667777776666 7899999887777
Q ss_pred HHHHHHHHh---------hcccceeEEec
Q 018952 147 VVWSCLKYI---------SHRLTGAALIA 166 (348)
Q Consensus 147 ia~~~a~~~---------p~~v~~~il~~ 166 (348)
=++.-+..+ |-.++++++.-
T Consensus 511 dsv~q~~~fn~al~~~~~~r~id~~~ltk 539 (587)
T KOG0781|consen 511 DSVDQLKKFNRALADHSTPRLIDGILLTK 539 (587)
T ss_pred HHHHHHHHHHHHHhcCCCccccceEEEEe
Confidence 665433322 23467766643
No 306
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=41.88 E-value=1.2e+02 Score=24.22 Aligned_cols=38 Identities=26% Similarity=0.353 Sum_probs=25.6
Q ss_pred CceEEEEcCCCC--CchhhhhhhcccHHHHhhcCcEEEEEcCC
Q 018952 63 KYKIIFVHGFGS--SRHDAAIAANLSPEVVDELGIYIVSFDRP 103 (348)
Q Consensus 63 ~~~vl~~hG~~~--~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 103 (348)
++.|+||+-.+. +...|. ..+....++.|+.+..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~---~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYT---AKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHH---HHHHHHHHHCCCEEEEeccc
Confidence 578999998773 344454 44455555679988888765
No 307
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=41.74 E-value=1.6e+02 Score=25.78 Aligned_cols=73 Identities=12% Similarity=0.138 Sum_probs=40.1
Q ss_pred ceEEEEcCCCCCch---hhhhhhcccHHHHhhcCcEEEEEcCCC--CCCCCCCCccchhhhHHHHHHHHHH---hCCCCe
Q 018952 64 YKIIFVHGFGSSRH---DAAIAANLSPEVVDELGIYIVSFDRPG--YGESDPDPKRTRKSLALDIEELADQ---LGLGSK 135 (348)
Q Consensus 64 ~~vl~~hG~~~~~~---~~~~~~~~~~~l~~~~g~~vi~~D~~G--~G~S~~~~~~~~~~~~~di~~~l~~---l~~~~~ 135 (348)
.++++++-...... ... ..+..|.+. |+.|+-+..-- +|......-.+.+++.+.+...+.. +. +++
T Consensus 113 ~plviaPamn~~m~~~p~~~---~Nl~~L~~~-G~~vv~P~~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~-~~~ 187 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQ---ENIKRLKDD-GYIFIEPDSGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLE-GKR 187 (390)
T ss_pred CCEEEEeCCChhhcCCHHHH---HHHHHHHHC-CcEEECCCCcccccccccCCCCCCHHHHHHHHHHHHhhccccC-Cce
Confidence 56777776443322 233 556667665 87665544221 2443332233777777777777644 32 356
Q ss_pred EEEEEe
Q 018952 136 FYVVGF 141 (348)
Q Consensus 136 ~~lvG~ 141 (348)
+.+.|-
T Consensus 188 vlit~g 193 (390)
T TIGR00521 188 VLITAG 193 (390)
T ss_pred EEEecC
Confidence 777666
No 308
>PLN02840 tRNA dimethylallyltransferase
Probab=41.62 E-value=1.1e+02 Score=27.01 Aligned_cols=75 Identities=23% Similarity=0.258 Sum_probs=45.3
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCC----CC--CCCCC------------------CCccchhh
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRP----GY--GESDP------------------DPKRTRKS 118 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~--G~S~~------------------~~~~~~~~ 118 (348)
+..+++|-|..+++.. .+...|+++.+..++..|-. |. |...+ ...++..+
T Consensus 20 ~~~vi~I~GptgsGKT-----tla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~ 94 (421)
T PLN02840 20 KEKVIVISGPTGAGKS-----RLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGA 94 (421)
T ss_pred CCeEEEEECCCCCCHH-----HHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHH
Confidence 4456777776666554 33467777766667777753 22 22211 12357888
Q ss_pred hHHHHHHHHHHhCC-CCeEEEEEec
Q 018952 119 LALDIEELADQLGL-GSKFYVVGFS 142 (348)
Q Consensus 119 ~~~di~~~l~~l~~-~~~~~lvG~S 142 (348)
+.++....++.+.. ++..+|||.+
T Consensus 95 F~~~A~~~I~~i~~rgkiPIvVGGT 119 (421)
T PLN02840 95 FFDDARRATQDILNRGRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 88998888887632 3455777644
No 309
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=41.35 E-value=89 Score=24.41 Aligned_cols=37 Identities=14% Similarity=0.236 Sum_probs=23.7
Q ss_pred CceEEEEcCCCCCchh--hhhhhcccHHHHhhcCcEEEEEcC
Q 018952 63 KYKIIFVHGFGSSRHD--AAIAANLSPEVVDELGIYIVSFDR 102 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~--~~~~~~~~~~l~~~~g~~vi~~D~ 102 (348)
++.|.||+-.+.+... |- .-....+++.|..+...++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv---~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYV---EKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHH---HHHHHHHHHcCCeeeeeec
Confidence 5689999987776554 33 3334445556877766654
No 310
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=41.16 E-value=33 Score=27.87 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=14.9
Q ss_pred HHHHHhCCCCeEEEEEeccchH
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQ 146 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ 146 (348)
.+.+.+.--..++++|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 3334443227999999999975
No 311
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=40.92 E-value=1.5e+02 Score=23.20 Aligned_cols=83 Identities=16% Similarity=0.219 Sum_probs=47.1
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhc-CcEEEEEcCCCCCCCCCCC-----------ccchhhhHHH-----HH
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDEL-GIYIVSFDRPGYGESDPDP-----------KRTRKSLALD-----IE 124 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~-g~~vi~~D~~G~G~S~~~~-----------~~~~~~~~~d-----i~ 124 (348)
.++.|+|++-.+.....+. ..+....++. |+.+..++... .++... .-+...+.+. +.
T Consensus 30 ~~~~i~~IptAs~~~~~~~---~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~ 104 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYT---ARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLD 104 (212)
T ss_pred CCCeEEEECCCCCCHHHHH---HHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHH
Confidence 3578999988777655555 4555556667 88888877644 111000 0011112211 23
Q ss_pred HHHHHhCCCCeEEEEEeccchHHHHH
Q 018952 125 ELADQLGLGSKFYVVGFSMGGQVVWS 150 (348)
Q Consensus 125 ~~l~~l~~~~~~~lvG~S~Gg~ia~~ 150 (348)
++++..-. +...++|.|.|+.+...
T Consensus 105 ~~l~~~~~-~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 105 AILKAALE-RGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHHH-CCCEEEEECHhHHhhCC
Confidence 33333212 45789999999988765
No 312
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=40.10 E-value=39 Score=18.99 Aligned_cols=13 Identities=8% Similarity=0.286 Sum_probs=7.7
Q ss_pred CchhHHHHHHHHH
Q 018952 1 MIREITVILLIGF 13 (348)
Q Consensus 1 m~~~~~~~~l~~~ 13 (348)
||+++..+++.++
T Consensus 1 MmKk~i~~i~~~l 13 (48)
T PRK10081 1 MVKKTIAAIFSVL 13 (48)
T ss_pred ChHHHHHHHHHHH
Confidence 7777666544433
No 313
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=39.50 E-value=98 Score=25.87 Aligned_cols=74 Identities=24% Similarity=0.309 Sum_probs=47.9
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcC----CCC--CCCCCC------------------Cccchhhh
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDR----PGY--GESDPD------------------PKRTRKSL 119 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~----~G~--G~S~~~------------------~~~~~~~~ 119 (348)
+.+++|-|-.+++.+ .+.-.|+++.|-.||..|- +|. |...+. ..++..++
T Consensus 3 ~~~i~I~GPTAsGKT-----~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f 77 (308)
T COG0324 3 PKLIVIAGPTASGKT-----ALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEF 77 (308)
T ss_pred ccEEEEECCCCcCHH-----HHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHH
Confidence 567777776666655 3356788888888999984 332 222211 13577788
Q ss_pred HHHHHHHHHHhCC-CCeEEEEEec
Q 018952 120 ALDIEELADQLGL-GSKFYVVGFS 142 (348)
Q Consensus 120 ~~di~~~l~~l~~-~~~~~lvG~S 142 (348)
.++....++.+.. ++-.++||.|
T Consensus 78 ~~~a~~~i~~i~~rgk~pIlVGGT 101 (308)
T COG0324 78 QRDALAAIDDILARGKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHHHhCCCCcEEEccH
Confidence 8888888877643 3456788754
No 314
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=38.98 E-value=96 Score=25.86 Aligned_cols=72 Identities=17% Similarity=0.157 Sum_probs=44.2
Q ss_pred eEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCC----CC--CCCCC------------------CCccchhhhH
Q 018952 65 KIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRP----GY--GESDP------------------DPKRTRKSLA 120 (348)
Q Consensus 65 ~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~----G~--G~S~~------------------~~~~~~~~~~ 120 (348)
+|++|-|-.+++.+ .+.-.++++ +-.+|..|-+ |. |...+ ...++..++.
T Consensus 5 ~ii~I~GpTasGKS-----~LAl~LA~~-~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~ 78 (300)
T PRK14729 5 KIVFIFGPTAVGKS-----NILFHFPKG-KAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFY 78 (300)
T ss_pred cEEEEECCCccCHH-----HHHHHHHHh-CCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHH
Confidence 46777776666554 334566766 3478888843 32 22211 1235788899
Q ss_pred HHHHHHHHHhCC-CCeEEEEEec
Q 018952 121 LDIEELADQLGL-GSKFYVVGFS 142 (348)
Q Consensus 121 ~di~~~l~~l~~-~~~~~lvG~S 142 (348)
++....++.+.. ++..+++|.|
T Consensus 79 ~~a~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 79 KEALKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCc
Confidence 999888887632 3456777754
No 315
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=38.92 E-value=39 Score=23.19 Aligned_cols=32 Identities=25% Similarity=0.483 Sum_probs=25.3
Q ss_pred EEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcC
Q 018952 66 IIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDR 102 (348)
Q Consensus 66 vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 102 (348)
+++|.|.++++.+.- +..|+++.|+.++..|-
T Consensus 1 vI~I~G~~gsGKST~-----a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKSTL-----AKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHHH-----HHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHHHH-----HHHHHHHHCCeEEEecc
Confidence 578889888877643 57788777999999887
No 316
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=38.56 E-value=2.3e+02 Score=23.54 Aligned_cols=96 Identities=13% Similarity=0.178 Sum_probs=56.8
Q ss_pred eEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccc------------------------hhhhH
Q 018952 65 KIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRT------------------------RKSLA 120 (348)
Q Consensus 65 ~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~------------------------~~~~~ 120 (348)
..+++-|...++..-. .++..+-+..|-.++.+|.--.++.....+++ +..++
T Consensus 3 krIyVvgT~DTKg~EL---~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa 79 (401)
T COG5441 3 KRIYVVGTADTKGEEL---AYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMA 79 (401)
T ss_pred ceEEEEecCCCcchhH---HHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHH
Confidence 3566667776655544 55667777778888888875433222111111 22334
Q ss_pred HHHHHHHHHhC-CCCeEEEEEeccchHHHHHHHHHhhcccceeEE
Q 018952 121 LDIEELADQLG-LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAAL 164 (348)
Q Consensus 121 ~di~~~l~~l~-~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il 164 (348)
+.+..++..-+ + .-++-+|.|.|..++.-.+.+.|--+-+++.
T Consensus 80 ~A~~r~l~sR~dV-~gmig~GGsgGT~lit~~m~~LPlgvPK~mV 123 (401)
T COG5441 80 EAFVRFLSSRGDV-AGMIGMGGSGGTALITPAMRRLPLGVPKVMV 123 (401)
T ss_pred HHHHHHhhcccch-hheeecCCCcchHhhhhHHHhcCcCCcceee
Confidence 44444443332 3 4577888898888888888877765555543
No 317
>COG3056 Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane]
Probab=38.39 E-value=58 Score=24.49 Aligned_cols=32 Identities=6% Similarity=0.090 Sum_probs=21.5
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEE
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYI 97 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~v 97 (348)
..-|+-+|....-...+. ...+.-+-.+||++
T Consensus 77 ~~~lv~L~as~~vr~llq---~vl~~q~~srGfri 108 (204)
T COG3056 77 DNQLVKLTASRDVRFLLQ---EVLEKQMTSRGFRV 108 (204)
T ss_pred CCCEEEecCCccHHHHHH---HHHHHHhhhcceEe
Confidence 456888888877777776 55544444458876
No 318
>COG0218 Predicted GTPase [General function prediction only]
Probab=37.53 E-value=41 Score=25.88 Aligned_cols=17 Identities=18% Similarity=0.044 Sum_probs=13.6
Q ss_pred EEEEEeCCCCCCChHHH
Q 018952 287 VHLWQGDEDRLVPVILQ 303 (348)
Q Consensus 287 vl~i~G~~D~~~~~~~~ 303 (348)
++++.-..|.+-..+..
T Consensus 138 ~~vv~tK~DKi~~~~~~ 154 (200)
T COG0218 138 VIVVLTKADKLKKSERN 154 (200)
T ss_pred eEEEEEccccCChhHHH
Confidence 99999999998765544
No 319
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.34 E-value=43 Score=27.19 Aligned_cols=31 Identities=23% Similarity=0.080 Sum_probs=22.4
Q ss_pred HHHHhCCCC-eEEEEEeccchHHHHHHHHHhhc
Q 018952 126 LADQLGLGS-KFYVVGFSMGGQVVWSCLKYISH 157 (348)
Q Consensus 126 ~l~~l~~~~-~~~lvG~S~Gg~ia~~~a~~~p~ 157 (348)
.+...++ . -=.++|.|.|+.++..++...+.
T Consensus 19 al~e~~~-~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 19 AFLEAGI-RPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHcCC-CCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3344455 3 34889999999999999886543
No 320
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=36.95 E-value=94 Score=28.49 Aligned_cols=49 Identities=8% Similarity=0.364 Sum_probs=33.9
Q ss_pred hhhhHHHHHHHHHHhCCCCeEEEEEe------ccchHHHHHHHHHhhcccceeEEeccc
Q 018952 116 RKSLALDIEELADQLGLGSKFYVVGF------SMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 116 ~~~~~~di~~~l~~l~~~~~~~lvG~------S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
...+...+.+.+.. . ++++++|| |.|+.+++..-+..-.+ .+.++++|.
T Consensus 323 aRvis~al~d~i~e--~-d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 323 ARVISTALSDIIKE--S-DNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHhh--c-CcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 34445555555554 3 79999999 78999998766654444 677777764
No 321
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=36.93 E-value=62 Score=25.18 Aligned_cols=60 Identities=20% Similarity=0.256 Sum_probs=31.2
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHH
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQ 129 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~ 129 (348)
+.+|+++||-...--..... .-....+++.|.+|-.-.++|.|.+- ..+..+++.+++++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~-~~~~~~L~~~~~~v~~~~~~g~gH~i------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWA-EKTAEFLKAAGANVEFHEYPGGGHEI------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHH-HHHHHHHHCTT-GEEEEEETT-SSS--------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHH-HHHHHHHHhcCCCEEEEEcCCCCCCC------CHHHHHHHHHHHhh
Confidence 56899999988764333211 33334444446666666666555442 23556666666654
No 322
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=36.57 E-value=90 Score=26.07 Aligned_cols=17 Identities=24% Similarity=0.389 Sum_probs=15.0
Q ss_pred EEEEeccchHHHHHHHH
Q 018952 137 YVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 137 ~lvG~S~Gg~ia~~~a~ 153 (348)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 57799999999999885
No 323
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.27 E-value=68 Score=26.67 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhCC---CCeEEEEEec--cchHHHHHHHHH
Q 018952 120 ALDIEELADQLGL---GSKFYVVGFS--MGGQVVWSCLKY 154 (348)
Q Consensus 120 ~~di~~~l~~l~~---~~~~~lvG~S--~Gg~ia~~~a~~ 154 (348)
+..+.+++++.++ ++++.++|.| +|..++.++..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 5567888888765 5899999997 999999888764
No 324
>PLN03059 beta-galactosidase; Provisional
Probab=36.17 E-value=1.8e+02 Score=28.23 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=44.3
Q ss_pred EcCCCCCchhhhhhhcccHHHHhhcCcEEEEE--cCCCCCCCCCCCccchhhhHHHHHHHHHHh---CC-----CCeEEE
Q 018952 69 VHGFGSSRHDAAIAANLSPEVVDELGIYIVSF--DRPGYGESDPDPKRTRKSLALDIEELADQL---GL-----GSKFYV 138 (348)
Q Consensus 69 ~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~--D~~G~G~S~~~~~~~~~~~~~di~~~l~~l---~~-----~~~~~l 138 (348)
+|=+-.....|. ..+..+.+ .|+++|.. -+-.|-.. +..++++. ..|+.++++.. |+ ..+.+-
T Consensus 51 iHY~R~~p~~W~---d~L~k~Ka-~GlNtV~tYV~Wn~HEp~--~G~~dF~G-~~DL~~Fl~la~e~GLyvilRpGPYIc 123 (840)
T PLN03059 51 IHYPRSTPEMWP---DLIQKAKD-GGLDVIQTYVFWNGHEPS--PGNYYFED-RYDLVKFIKVVQAAGLYVHLRIGPYIC 123 (840)
T ss_pred cccCcCCHHHHH---HHHHHHHH-cCCCeEEEEecccccCCC--CCeeeccc-hHHHHHHHHHHHHcCCEEEecCCccee
Confidence 344455678898 66666555 48887763 33333222 22344433 45666666543 42 246666
Q ss_pred EEeccchHHHHHH
Q 018952 139 VGFSMGGQVVWSC 151 (348)
Q Consensus 139 vG~S~Gg~ia~~~ 151 (348)
.=+.+||.-++..
T Consensus 124 AEw~~GGlP~WL~ 136 (840)
T PLN03059 124 AEWNFGGFPVWLK 136 (840)
T ss_pred eeecCCCCchhhh
Confidence 6699999888754
No 325
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=36.13 E-value=1.1e+02 Score=22.38 Aligned_cols=48 Identities=25% Similarity=0.315 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHH
Q 018952 94 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWS 150 (348)
Q Consensus 94 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~ 150 (348)
|-.|++.|.+|-- .+-+++++.+..+.+. |- +=..++|.|.|=--++.
T Consensus 67 ~~~vi~Ld~~Gk~-------~sSe~fA~~l~~~~~~-G~-~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 67 GSYVVLLDIRGKA-------LSSEEFADFLERLRDD-GR-DISFLIGGADGLSEAVK 114 (155)
T ss_pred CCeEEEEecCCCc-------CChHHHHHHHHHHHhc-CC-eEEEEEeCcccCCHHHH
Confidence 4579999999842 3445666666655443 32 56788899998544443
No 326
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=35.94 E-value=42 Score=28.56 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=31.6
Q ss_pred CCCCcccceeecCCCeEEEEeeccCCcc--------CCCceEEEEcCCCCC
Q 018952 33 GGPAITAPRIKLRDGRHLAYKEHGVSKE--------LAKYKIIFVHGFGSS 75 (348)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~y~~~g~~~~--------~~~~~vl~~hG~~~~ 75 (348)
...++++......||.++-|..+|.++. -++|.|.++|-+-+.
T Consensus 447 ~q~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 447 WQHPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred hhChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 3456777777788999999999996542 246777788876543
No 327
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=35.82 E-value=62 Score=23.97 Aligned_cols=51 Identities=12% Similarity=0.149 Sum_probs=27.9
Q ss_pred hhhHHHHHHHHHHhC-CCCeEEEEEeccchHHHHHHHHHhhcccceeEEecc
Q 018952 117 KSLALDIEELADQLG-LGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAP 167 (348)
Q Consensus 117 ~~~~~di~~~l~~l~-~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~ 167 (348)
++..+++.++++.+. .++++.+.|-|..|..-+.++...++.++.++=.+|
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 344445555555542 247899999999999988888766677777776665
No 328
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=34.03 E-value=52 Score=26.19 Aligned_cols=31 Identities=16% Similarity=0.069 Sum_probs=22.2
Q ss_pred HHHHHhCCC-CeEEEEEeccchHHHHHHHHHh
Q 018952 125 ELADQLGLG-SKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 125 ~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
+.+...++. +.-.+.|-|.|+.++..++...
T Consensus 19 ~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 19 SLLIEAGVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 334444551 1348999999999999999864
No 329
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=33.33 E-value=67 Score=26.96 Aligned_cols=19 Identities=26% Similarity=0.420 Sum_probs=16.2
Q ss_pred EEEEeccchHHHHHHHHHh
Q 018952 137 YVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 137 ~lvG~S~Gg~ia~~~a~~~ 155 (348)
.+.|.|+||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6779999999999998743
No 330
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=32.92 E-value=1.5e+02 Score=24.34 Aligned_cols=81 Identities=22% Similarity=0.277 Sum_probs=43.0
Q ss_pred EEEcCCCCCchhhhhhhcccHHHHhhcCc-------EEEEEcCCCCCCCCCCC-ccchhhhH--------HHHHHHHHHh
Q 018952 67 IFVHGFGSSRHDAAIAANLSPEVVDELGI-------YIVSFDRPGYGESDPDP-KRTRKSLA--------LDIEELADQL 130 (348)
Q Consensus 67 l~~hG~~~~~~~~~~~~~~~~~l~~~~g~-------~vi~~D~~G~G~S~~~~-~~~~~~~~--------~di~~~l~~l 130 (348)
+++.|.|...-.-. .++.....+.|. +++.+|..|.=..+... ...-..++ .++.++++.+
T Consensus 28 iv~~GAGsAg~gia---~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v 104 (279)
T cd05312 28 ILFLGAGSAGIGIA---DLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAV 104 (279)
T ss_pred EEEECcCHHHHHHH---HHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhc
Confidence 45556665443333 333333223365 79999999853332221 11111122 3566777666
Q ss_pred CCCCeEEEEEecc-chHHHHHHHH
Q 018952 131 GLGSKFYVVGFSM-GGQVVWSCLK 153 (348)
Q Consensus 131 ~~~~~~~lvG~S~-Gg~ia~~~a~ 153 (348)
+ +-+++|-|- ||.+.-.+..
T Consensus 105 ~---ptvlIG~S~~~g~ft~evv~ 125 (279)
T cd05312 105 K---PTVLIGLSGVGGAFTEEVVR 125 (279)
T ss_pred C---CCEEEEeCCCCCCCCHHHHH
Confidence 4 459999994 7766555443
No 331
>PF13728 TraF: F plasmid transfer operon protein
Probab=32.64 E-value=1.3e+02 Score=23.56 Aligned_cols=45 Identities=11% Similarity=0.085 Sum_probs=34.7
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCC
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPD 111 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~ 111 (348)
..++|.-|...-..... +.+..+.++.|+.|+.++.-|.+...-+
T Consensus 123 gL~~F~~~~C~~C~~~~---pil~~~~~~yg~~v~~vs~DG~~~~~fp 167 (215)
T PF13728_consen 123 GLFFFYRSDCPYCQQQA---PILQQFADKYGFSVIPVSLDGRPIPSFP 167 (215)
T ss_pred EEEEEEcCCCchhHHHH---HHHHHHHHHhCCEEEEEecCCCCCcCCC
Confidence 35566667665566677 8899999999999999999988777543
No 332
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=32.32 E-value=3.5e+02 Score=23.79 Aligned_cols=75 Identities=11% Similarity=0.178 Sum_probs=41.1
Q ss_pred CceEEEEcCCCCCchhhh--hhhcccHHHHhhcCcEEEEEcCCC---CCCCCCCCccchhhhHHHHHHHHHHhCC-CCeE
Q 018952 63 KYKIIFVHGFGSSRHDAA--IAANLSPEVVDELGIYIVSFDRPG---YGESDPDPKRTRKSLALDIEELADQLGL-GSKF 136 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~--~~~~~~~~l~~~~g~~vi~~D~~G---~G~S~~~~~~~~~~~~~di~~~l~~l~~-~~~~ 136 (348)
+.|+++++.... .+|. ..+..+..|.+. |+.|+-++ +| +|......-.+.++..+.+...+..... ++++
T Consensus 116 ~~pvvi~Pamn~--~m~~~p~~~~Nl~~L~~~-G~~ii~P~-~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMNT--QMWENPATQRNLATLRSR-GVEIIGPA-SGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRV 191 (399)
T ss_pred CCCEEEEeCCCh--hHcCCHHHHHHHHHHHHC-CCEEECCC-CccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEE
Confidence 457777775543 3332 111455666654 88776554 33 2333322223777777777776643222 3577
Q ss_pred EEEEe
Q 018952 137 YVVGF 141 (348)
Q Consensus 137 ~lvG~ 141 (348)
.+-|-
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 77776
No 333
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=32.31 E-value=43 Score=29.63 Aligned_cols=38 Identities=18% Similarity=0.106 Sum_probs=23.8
Q ss_pred EEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceee
Q 018952 287 VHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIAD 327 (348)
Q Consensus 287 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 327 (348)
|++++|+.|+......... .-.....+++||++|+.-.
T Consensus 379 viFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 379 VIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp EEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGG
T ss_pred EEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeeccc
Confidence 9999999999976663322 1234566789999997644
No 334
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=31.95 E-value=1.4e+02 Score=28.06 Aligned_cols=47 Identities=23% Similarity=0.236 Sum_probs=26.6
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCC--CCCCCC
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRP--GYGESD 109 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~--G~G~S~ 109 (348)
-+.|+|++||.....-.......+...|.. .|..|-..-+| ||+.+.
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~-~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKR-KGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHH-cCceEEEEEeCCCCcCCCC
Confidence 367999999987643322211134455554 47666555555 455554
No 335
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=31.27 E-value=1e+02 Score=19.17 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=21.7
Q ss_pred hcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHH
Q 018952 92 ELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELAD 128 (348)
Q Consensus 92 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~ 128 (348)
+.+|.+..+|++|+-. .+.|.++..+.+.++++
T Consensus 13 dg~y~~~~Pdlpgc~s----~G~T~eea~~n~~eai~ 45 (73)
T COG1598 13 DGGYVASVPDLPGCHS----QGETLEEALQNAKEAIE 45 (73)
T ss_pred CCCEEEEeCCCCCccc----cCCCHHHHHHHHHHHHH
Confidence 4479999999999733 23366666665555554
No 336
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=30.91 E-value=2.4e+02 Score=23.33 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=24.1
Q ss_pred hcCcE--EEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHH
Q 018952 92 ELGIY--IVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVV 148 (348)
Q Consensus 92 ~~g~~--vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia 148 (348)
+.|.. =|.+|. |.|.+.... .--+..+.+..+ +.++ ..+++|+|-=+.+.
T Consensus 174 ~~GI~~~~IilDP-GiGF~k~~~--~n~~ll~~l~~l-~~lg---~Pilvg~SRKsfig 225 (282)
T PRK11613 174 AAGIAKEKLLLDP-GFGFGKNLS--HNYQLLARLAEF-HHFN---LPLLVGMSRKSMIG 225 (282)
T ss_pred HcCCChhhEEEeC-CCCcCCCHH--HHHHHHHHHHHH-HhCC---CCEEEEecccHHHH
Confidence 34764 567786 666554210 111122222222 2333 45899999555443
No 337
>PF10855 DUF2648: Protein of unknown function (DUF2648); InterPro: IPR022561 This family of proteins with unknown function appears to be restricted to eubacteia.
Probab=30.67 E-value=22 Score=17.74 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=11.2
Q ss_pred chhHHHHHHHHHHHHHhhc
Q 018952 2 IREITVILLIGFVAWAYQA 20 (348)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~ 20 (348)
|+++.++++++.++++-+.
T Consensus 1 MKkl~i~L~l~ga~f~~fK 19 (33)
T PF10855_consen 1 MKKLAIILILGGAAFYGFK 19 (33)
T ss_pred CCceeehhhhhhHHHHHHH
Confidence 4566666666665555443
No 338
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=30.65 E-value=70 Score=25.64 Aligned_cols=19 Identities=26% Similarity=0.205 Sum_probs=17.3
Q ss_pred EEEEeccchHHHHHHHHHh
Q 018952 137 YVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 137 ~lvG~S~Gg~ia~~~a~~~ 155 (348)
.+.|-|.|+.++..++...
T Consensus 34 ~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred EEEEEcHHHHHHHHHHhCC
Confidence 8999999999999999864
No 339
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=30.42 E-value=3.9e+02 Score=23.76 Aligned_cols=49 Identities=20% Similarity=0.226 Sum_probs=39.4
Q ss_pred hhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhc--ccceeEEec
Q 018952 117 KSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALIA 166 (348)
Q Consensus 117 ~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~~il~~ 166 (348)
+++.+.+.++-+.+.. ..+.+|--++=|.-|...|..+.+ .+.|+|+.=
T Consensus 198 e~Lm~El~~Ik~~~~P-~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlTK 248 (451)
T COG0541 198 EELMDELKEIKEVINP-DETLLVVDAMIGQDAVNTAKAFNEALGITGVILTK 248 (451)
T ss_pred HHHHHHHHHHHhhcCC-CeEEEEEecccchHHHHHHHHHhhhcCCceEEEEc
Confidence 5667778888888888 789999999999999999987665 377888753
No 340
>PF07380 Pneumo_M2: Pneumovirus M2 protein; InterPro: IPR009969 This family consists of several Pneumovirus M2 proteins. The M2-1 protein of respiratory syncytial virus (RSV) is a transcription processivity factor that is essential for virus replication [].
Probab=30.13 E-value=1.1e+02 Score=19.21 Aligned_cols=24 Identities=21% Similarity=0.415 Sum_probs=19.5
Q ss_pred cchhhhHHHHHHHHHHhCCCCeEE
Q 018952 114 RTRKSLALDIEELADQLGLGSKFY 137 (348)
Q Consensus 114 ~~~~~~~~di~~~l~~l~~~~~~~ 137 (348)
++..++.+++..+++++|+.+.++
T Consensus 60 WTsq~Lid~~q~fLqhlgis~diY 83 (89)
T PF07380_consen 60 WTSQDLIDATQNFLQHLGISEDIY 83 (89)
T ss_pred cchHHHHHHHHHHHHHcCCCcceE
Confidence 478899999999999999844443
No 341
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=29.74 E-value=56 Score=27.13 Aligned_cols=26 Identities=19% Similarity=-0.010 Sum_probs=20.4
Q ss_pred HhCCCCeEEEEEeccchHHHHHHHHHh
Q 018952 129 QLGLGSKFYVVGFSMGGQVVWSCLKYI 155 (348)
Q Consensus 129 ~l~~~~~~~lvG~S~Gg~ia~~~a~~~ 155 (348)
..++ .+-++.|.|.|+.+|..++...
T Consensus 93 e~~l-~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 93 EQDL-LPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HcCC-CCCEEEEEcHHHHHHHHHHcCC
Confidence 3455 4557999999999999998754
No 342
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=29.20 E-value=1.2e+02 Score=27.63 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=26.8
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCC
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRP 103 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 103 (348)
..|.||++.|.++++.+.. +..++...|+.++..|-.
T Consensus 367 ~~p~LVil~G~pGSGKST~-----A~~l~~~~g~~~vn~D~l 403 (526)
T TIGR01663 367 APCEMVIAVGFPGAGKSHF-----CKKFFQPAGYKHVNADTL 403 (526)
T ss_pred CCceEEEEECCCCCCHHHH-----HHHHHHHcCCeEECcHHH
Confidence 4678999999988766533 466666668888877754
No 343
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=28.63 E-value=3.4e+02 Score=24.18 Aligned_cols=64 Identities=16% Similarity=0.132 Sum_probs=43.2
Q ss_pred CcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhc--ccceeEEe
Q 018952 94 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALI 165 (348)
Q Consensus 94 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~~il~ 165 (348)
+|+++.+|-+|.-. .-+.+.+.+..+.+.... ..+++|--++-|.-+...+..+.+ .+.++|+.
T Consensus 182 ~~DvViIDTaGr~~-------~d~~lm~El~~i~~~~~p-~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 182 NFDIIIVDTSGRHK-------QEDSLFEEMLQVAEAIQP-DNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCEEEEECCCCCc-------chHHHHHHHHHHhhhcCC-cEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 78999999998422 223456666666666666 677888878777777766665533 46777764
No 344
>PF10717 ODV-E18: Occlusion-derived virus envelope protein ODV-E18; InterPro: IPR019655 Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=27.99 E-value=1.3e+02 Score=19.26 Aligned_cols=18 Identities=17% Similarity=0.390 Sum_probs=8.9
Q ss_pred hHHHHHHHHHHHHHhhcc
Q 018952 4 EITVILLIGFVAWAYQAT 21 (348)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~ 21 (348)
++..+++|.++++++...
T Consensus 30 ILivLVIIiLlImlfqsS 47 (85)
T PF10717_consen 30 ILIVLVIIILLIMLFQSS 47 (85)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 344444555555555543
No 345
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=27.91 E-value=1.4e+02 Score=22.23 Aligned_cols=36 Identities=36% Similarity=0.455 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHhCC---CCeEEEEEec--cchHHHHHHHHH
Q 018952 119 LALDIEELADQLGL---GSKFYVVGFS--MGGQVVWSCLKY 154 (348)
Q Consensus 119 ~~~di~~~l~~l~~---~~~~~lvG~S--~Gg~ia~~~a~~ 154 (348)
-+..+.+++++.+. ++++.++|.| .|--++..+..+
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 45667778888764 5899999999 577777766654
No 346
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=27.84 E-value=1.4e+02 Score=26.02 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=30.1
Q ss_pred CcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccc
Q 018952 94 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMG 144 (348)
Q Consensus 94 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~G 144 (348)
-|+||.+|.|.+++|......-..++.+-+...++-|.. +-+.++-.|.+
T Consensus 290 ~fDlIilDPPsF~r~k~~~~~~~rdy~~l~~~~~~iL~p-gG~l~~~s~~~ 339 (393)
T COG1092 290 KFDLIILDPPSFARSKKQEFSAQRDYKDLNDLALRLLAP-GGTLVTSSCSR 339 (393)
T ss_pred cccEEEECCcccccCcccchhHHHHHHHHHHHHHHHcCC-CCEEEEEecCC
Confidence 399999999999999865422334444444455555554 33444444433
No 347
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=27.80 E-value=3.2e+02 Score=24.00 Aligned_cols=80 Identities=16% Similarity=0.205 Sum_probs=47.1
Q ss_pred ccHHHHhhcCcEEEEEcCCCCCCCCCCC----cc---chhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhc
Q 018952 85 LSPEVVDELGIYIVSFDRPGYGESDPDP----KR---TRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH 157 (348)
Q Consensus 85 ~~~~l~~~~g~~vi~~D~~G~G~S~~~~----~~---~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 157 (348)
..+.+.++ ++-|+-.|..++=.--... .+ .++.+.+++...... +....-+|.|---||.+++..++..|+
T Consensus 67 ~a~al~~~-~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~-g~yr~PVl~g~g~Gg~~A~asaaqSp~ 144 (456)
T COG3946 67 RADALLAR-GALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADL-GVYRLPVLTGPGQGGTLAYASAAQSPD 144 (456)
T ss_pred hhHHHhhc-CCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhc-cCcccceEeecCCCcHHHHHHHhhChh
Confidence 44555554 7888888887763332111 12 344444444433322 222456888999999999999888776
Q ss_pred -ccceeEEec
Q 018952 158 -RLTGAALIA 166 (348)
Q Consensus 158 -~v~~~il~~ 166 (348)
.+.+.+.+.
T Consensus 145 atlag~Vsld 154 (456)
T COG3946 145 ATLAGAVSLD 154 (456)
T ss_pred hhhcCccCCC
Confidence 344544444
No 348
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.55 E-value=1e+02 Score=21.40 Aligned_cols=31 Identities=23% Similarity=0.308 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHHhCCCCeEEEEEeccchHHHH
Q 018952 118 SLALDIEELADQLGLGSKFYVVGFSMGGQVVW 149 (348)
Q Consensus 118 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~ 149 (348)
+....+.-.+..++. +.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v-~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGV-KHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCC-CEEEEEccCCCcHHHH
Confidence 466778888899999 8999999976665553
No 349
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=27.53 E-value=1.1e+02 Score=26.58 Aligned_cols=87 Identities=16% Similarity=0.255 Sum_probs=49.9
Q ss_pred EeeccCCccCCCceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhC
Q 018952 52 YKEHGVSKELAKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLG 131 (348)
Q Consensus 52 y~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~ 131 (348)
|..|.......+..|++.--++.+...-. .+++.+.+. |..|..+++.-. |..++++.+.
T Consensus 237 Y~~W~~~~~~~~V~l~Y~smyg~T~~ma~---aiaegl~~~-gv~v~~~~~~~~----------------~~~eI~~~i~ 296 (388)
T COG0426 237 YRDWAEGQPKGKVDLIYDSMYGNTEKMAQ---AIAEGLMKE-GVDVEVINLEDA----------------DPSEIVEEIL 296 (388)
T ss_pred HHHHHccCCcceEEEEEecccCCHHHHHH---HHHHHhhhc-CCceEEEEcccC----------------CHHHHHHHHh
Confidence 45554443333345555555666666555 666666665 888888876521 3444444444
Q ss_pred CCCeEEEEEec---------cchHHHHHHHHHhhccc
Q 018952 132 LGSKFYVVGFS---------MGGQVVWSCLKYISHRL 159 (348)
Q Consensus 132 ~~~~~~lvG~S---------~Gg~ia~~~a~~~p~~v 159 (348)
. .+..++|-+ ++..+....+...+.+.
T Consensus 297 ~-a~~~vvGsPT~~~~~~p~i~~~l~~v~~~~~~~k~ 332 (388)
T COG0426 297 D-AKGLVVGSPTINGGAHPPIQTALGYVLALAPKNKL 332 (388)
T ss_pred h-cceEEEecCcccCCCCchHHHHHHHHHhccCcCce
Confidence 4 577888888 34445555555555544
No 350
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=27.52 E-value=1.4e+02 Score=22.02 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=33.9
Q ss_pred CcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccc
Q 018952 94 GIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPV 168 (348)
Q Consensus 94 g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~ 168 (348)
+-.+++.|-.|- ..+-+++++.+..+... |..+=+.+||.+.|=.-. +- ++.+..+.+++.
T Consensus 67 ~~~~i~Ld~~Gk-------~~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G~~~~--~~----~~a~~~lSLS~m 127 (155)
T PF02590_consen 67 NDYVILLDERGK-------QLSSEEFAKKLERWMNQ-GKSDIVFIIGGADGLSEE--VR----KRADEKLSLSKM 127 (155)
T ss_dssp TSEEEEE-TTSE-------E--HHHHHHHHHHHHHT-TS-EEEEEE-BTTB--HH--HH----HH-SEEEES-SS
T ss_pred CCEEEEEcCCCc-------cCChHHHHHHHHHHHhc-CCceEEEEEecCCCCCHH--HH----hhcCceEEEecC
Confidence 466899998874 34667788887777765 332457889999983222 11 234456666654
No 351
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=27.46 E-value=64 Score=22.13 Aligned_cols=17 Identities=18% Similarity=0.378 Sum_probs=14.8
Q ss_pred ceEEEEcCCCCCchhhh
Q 018952 64 YKIIFVHGFGSSRHDAA 80 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~ 80 (348)
+-.+||||-......|.
T Consensus 14 ~ryvFIHGpe~pd~~w~ 30 (122)
T PF12566_consen 14 PRYVFIHGPENPDAEWQ 30 (122)
T ss_pred ceEEEEeCCCCCCCCCc
Confidence 47999999998888887
No 352
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=27.44 E-value=2.1e+02 Score=19.59 Aligned_cols=76 Identities=20% Similarity=0.195 Sum_probs=46.0
Q ss_pred eEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccc
Q 018952 65 KIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMG 144 (348)
Q Consensus 65 ~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~G 144 (348)
.||.-|| .-+.... ..+..+.....-.+.++++. ++.+.+++.+.+.+.++.++.++.+.++-==.|
T Consensus 2 iii~sHG--~~A~g~~---~~~~~i~G~~~~~i~~~~~~--------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~g 68 (116)
T PF03610_consen 2 IIIASHG--SLAEGLL---ESAEMILGEDQDNIEAVDLY--------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGG 68 (116)
T ss_dssp EEEEEET--THHHHHH---HHHHHHHTSTCSSEEEEEET--------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTT
T ss_pred EEEEECc--HHHHHHH---HHHHHHcCCCcccEEEEECc--------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCC
Confidence 4677888 3333344 44555554411246666644 234788999999999998876466666665555
Q ss_pred hHHHHHHHH
Q 018952 145 GQVVWSCLK 153 (348)
Q Consensus 145 g~ia~~~a~ 153 (348)
|...-..+.
T Consensus 69 gsp~n~a~~ 77 (116)
T PF03610_consen 69 GSPFNEAAR 77 (116)
T ss_dssp SHHHHHHHH
T ss_pred CccchHHHH
Confidence 554444443
No 353
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=27.15 E-value=76 Score=17.91 Aligned_cols=30 Identities=13% Similarity=0.385 Sum_probs=23.9
Q ss_pred cchhhhHHHHHHHHHHhCCCCeEEEEE-eccc
Q 018952 114 RTRKSLALDIEELADQLGLGSKFYVVG-FSMG 144 (348)
Q Consensus 114 ~~~~~~~~di~~~l~~l~~~~~~~lvG-~S~G 144 (348)
.+.+.+..|+...|..+.+ ..+.++| |..|
T Consensus 6 w~PqSWM~DLrS~I~~~~I-~ql~ipGsHns~ 36 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAI-TQLFIPGSHNSG 36 (51)
T ss_pred cCcHHHHHHHHHHHhccee-eeEEeccccccc
Confidence 4677899999999999988 7888887 4433
No 354
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=27.07 E-value=3.5e+02 Score=22.07 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=42.6
Q ss_pred CCceEEEEcCCCCCchhhhhhhcccHHHHhhcCc-EEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEE-E
Q 018952 62 AKYKIIFVHGFGSSRHDAAIAANLSPEVVDELGI-YIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYV-V 139 (348)
Q Consensus 62 ~~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~l-v 139 (348)
.+.||++=-|...+...|. .-++.+... |- +++..+. | .|.-.+.....-....+..+-+..+. ++.+ -
T Consensus 131 ~gkPVilk~G~~~t~~e~~---~Ave~i~~~-Gn~~i~l~~r-G--~s~y~~~~~~~~dl~~i~~lk~~~~~--pV~~ds 201 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWL---YAAEYILSS-GNGNVILCER-G--IRTFEKATRNTLDLSAVPVLKKETHL--PIIVDP 201 (260)
T ss_pred CCCcEEEeCCCCCCHHHHH---HHHHHHHHc-CCCcEEEEEC-C--CCCCCCCCcCCcCHHHHHHHHHhhCC--CEEEcC
Confidence 3678999999999999998 777777665 44 4555443 3 33221100111112222333333344 7777 7
Q ss_pred Eeccc
Q 018952 140 GFSMG 144 (348)
Q Consensus 140 G~S~G 144 (348)
+||.|
T Consensus 202 ~Hs~G 206 (260)
T TIGR01361 202 SHAAG 206 (260)
T ss_pred CCCCC
Confidence 99988
No 355
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=26.81 E-value=61 Score=17.92 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=22.2
Q ss_pred hcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHH
Q 018952 92 ELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELAD 128 (348)
Q Consensus 92 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~ 128 (348)
..+|.+..+|++|+-. .+.|.++..+.+.+.+.
T Consensus 11 ~~~y~~~~pdlpg~~t----~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFT----QGDTLEEALENAKEALE 43 (48)
T ss_dssp SSSEEEEETTCCTCEE----EESSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhh----cCCCHHHHHHHHHHHHH
Confidence 3478899999998631 12366777776666654
No 356
>COG5353 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.60 E-value=89 Score=22.60 Aligned_cols=29 Identities=24% Similarity=0.442 Sum_probs=18.0
Q ss_pred eeecCCCeEEEEeeccCCccCCCceEEEEc
Q 018952 41 RIKLRDGRHLAYKEHGVSKELAKYKIIFVH 70 (348)
Q Consensus 41 ~~~~~~g~~l~y~~~g~~~~~~~~~vl~~h 70 (348)
.+.+-+|.+.+|...|..+ .....+|+++
T Consensus 56 ~~~~y~G~e~YYvi~G~nk-~~e~i~VwVp 84 (161)
T COG5353 56 QFDLYNGKEVYYVIVGLNK-KGEEIIVWVP 84 (161)
T ss_pred eeEEecCcEEEEEEEecCC-CCcEEEEEec
Confidence 3445568888888888643 2334556664
No 357
>COG3657 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.30 E-value=1.5e+02 Score=19.65 Aligned_cols=38 Identities=24% Similarity=0.448 Sum_probs=25.9
Q ss_pred CCCCCcccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCC
Q 018952 32 PGGPAITAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSS 75 (348)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~ 75 (348)
|-+-++.+-++..-.|.+++|...|. ..|+++.|.--+
T Consensus 45 pvgeGV~ELRId~GpGyRvY~~~~g~------v~i~lLCgGdks 82 (100)
T COG3657 45 PVGEGVSELRIDHGPGYRVYFQQRGL------VLILLLCGGDKS 82 (100)
T ss_pred ccccchhhheeccCCceEEEEEecCc------EEEEEeccCchh
Confidence 34445667778877899999988765 456666665443
No 358
>PRK10867 signal recognition particle protein; Provisional
Probab=26.24 E-value=4.7e+02 Score=23.34 Aligned_cols=67 Identities=24% Similarity=0.262 Sum_probs=40.5
Q ss_pred hhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhc--ccceeEEe
Q 018952 91 DELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISH--RLTGAALI 165 (348)
Q Consensus 91 ~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~~il~ 165 (348)
...+|+++.+|-+|....+ +...+.+..+.+.... ..+++|.-++-|.-+...|..+-+ .+.++|+.
T Consensus 180 ~~~~~DvVIIDTaGrl~~d-------~~lm~eL~~i~~~v~p-~evllVlda~~gq~av~~a~~F~~~~~i~giIlT 248 (433)
T PRK10867 180 KENGYDVVIVDTAGRLHID-------EELMDELKAIKAAVNP-DEILLVVDAMTGQDAVNTAKAFNEALGLTGVILT 248 (433)
T ss_pred HhcCCCEEEEeCCCCcccC-------HHHHHHHHHHHHhhCC-CeEEEEEecccHHHHHHHHHHHHhhCCCCEEEEe
Confidence 3347999999999864321 2345555555555555 566666666666666666654432 35666663
No 359
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=26.10 E-value=2e+02 Score=23.64 Aligned_cols=47 Identities=17% Similarity=0.301 Sum_probs=28.4
Q ss_pred cEEEEEeCCCCCCChHHHHHHHhhCCCceEEEeC-CCCcceeeC--cchHHHHHHH
Q 018952 286 SVHLWQGDEDRLVPVILQRYISKKLPWIRYHEIP-GSGHLIADA--DGMTEAIIKA 338 (348)
Q Consensus 286 Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e--p~~~~~~i~~ 338 (348)
||.++.|++ ...++..+.+|+++++.+. +.|++.-.. |++..+.|++
T Consensus 149 PV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~ 198 (270)
T cd08769 149 PVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELRE 198 (270)
T ss_pred CEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHH
Confidence 399999854 2334555566988877775 456544432 5555555543
No 360
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=26.07 E-value=2.4e+02 Score=24.38 Aligned_cols=56 Identities=20% Similarity=0.170 Sum_probs=34.3
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCC
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGL 132 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~ 132 (348)
...+|.+.|.-.|+-. ..++.+.|++|+++.+..+.... ..+..+++..+.+.+++
T Consensus 6 ~kVlValSGGVDSsva--------a~LL~~~G~~V~~v~~~~~~~~~------~~~d~~~a~~va~~LgI 61 (360)
T PRK14665 6 KRVLLGMSGGTDSSVA--------AMLLLEAGYEVTGVTFRFYEFNG------STEYLEDARALAERLGI 61 (360)
T ss_pred CEEEEEEcCCHHHHHH--------HHHHHHcCCeEEEEEEecCCCCC------ChHHHHHHHHHHHHhCC
Confidence 4566777665554433 33555568999887765432211 12456778888888887
No 361
>PRK00131 aroK shikimate kinase; Reviewed
Probab=25.92 E-value=66 Score=23.77 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=24.4
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcC
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDR 102 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 102 (348)
.+.++++.|.++++..- +...+++..|+.++-.|.
T Consensus 3 ~~~~i~l~G~~GsGKst-----la~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 3 KGPNIVLIGFMGAGKST-----IGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCCeEEEEcCCCCCHHH-----HHHHHHHHhCCCEEEChH
Confidence 35688889988877663 357777777777776553
No 362
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=25.88 E-value=1e+02 Score=22.75 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=23.4
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcC
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDR 102 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~ 102 (348)
++.+|++-|.+++...-- +..+...|.+ .|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTl-A~~L~~~L~~-~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTL-ARALERRLFA-RGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHH-HHHHHHHHHH-TTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHH-HHHHHHHHHH-cCCcEEEecC
Confidence 367999999998876522 1133344444 4899999974
No 363
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.23 E-value=1.5e+02 Score=24.54 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhCC---CCeEEEEEec--cchHHHHHHHHH
Q 018952 120 ALDIEELADQLGL---GSKFYVVGFS--MGGQVVWSCLKY 154 (348)
Q Consensus 120 ~~di~~~l~~l~~---~~~~~lvG~S--~Gg~ia~~~a~~ 154 (348)
+..+.+++++.++ ++++.++|.| +|..++.++..+
T Consensus 142 p~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~ 181 (284)
T PRK14179 142 PAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDK 181 (284)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHC
Confidence 4557788888764 5899999986 899999888864
No 364
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=24.96 E-value=74 Score=26.66 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=17.1
Q ss_pred CeEEEEEeccchHHHHHHHH
Q 018952 134 SKFYVVGFSMGGQVVWSCLK 153 (348)
Q Consensus 134 ~~~~lvG~S~Gg~ia~~~a~ 153 (348)
++..+.|||+|=+.|+..+.
T Consensus 85 ~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 85 KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCceeecccHhHHHHHHHcc
Confidence 78899999999998887664
No 365
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=24.93 E-value=93 Score=25.02 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=17.1
Q ss_pred EEEEeccchHHHHHHHHHhh
Q 018952 137 YVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 137 ~lvG~S~Gg~ia~~~a~~~p 156 (348)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987643
No 366
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=24.89 E-value=58 Score=26.59 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=24.7
Q ss_pred ceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEc
Q 018952 64 YKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFD 101 (348)
Q Consensus 64 ~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 101 (348)
..||++|....+..... .+++.+.++ ||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~---~iI~~Lk~k-Gy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLE---EMITIIKEK-GYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHH---HHHHHHHHC-CCEEEeHH
Confidence 46889997666666666 667777665 99988774
No 367
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=24.74 E-value=2.9e+02 Score=20.98 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=24.7
Q ss_pred ccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHH-HHHHHhCC
Q 018952 85 LSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIE-ELADQLGL 132 (348)
Q Consensus 85 ~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~-~~l~~l~~ 132 (348)
.+..|.+ .|+.++-+.. |+ =.+ ..+++++++.+. .+++.+|+
T Consensus 131 Nl~~L~~-~G~~ii~P~~-g~--~~~--p~~~~~~~~~i~~~~l~~lg~ 173 (181)
T TIGR00421 131 NMLRLSR-MGAIILPPMP-AF--YTR--PKSVEDMIDFIVGRVLDQLGI 173 (181)
T ss_pred HHHHHHH-CCCEEECCCC-cc--cCC--CCCHHHHHHHHHHHHHHHcCC
Confidence 3455655 4887765543 32 111 127777777644 77888887
No 368
>PLN03006 carbonate dehydratase
Probab=24.58 E-value=1.7e+02 Score=24.32 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHhCCCCeEEEEEeccchHHHH
Q 018952 119 LALDIEELADQLGLGSKFYVVGFSMGGQVVW 149 (348)
Q Consensus 119 ~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~ 149 (348)
...-|+..+.+|+. +.++++|||-=|.+..
T Consensus 158 ~~aSLEYAV~~L~V-~~IVV~GHs~CGaV~A 187 (301)
T PLN03006 158 TKAALEFSVNTLNV-ENILVIGHSRCGGIQA 187 (301)
T ss_pred hhhhHHHHHHHhCC-CEEEEecCCCchHHHH
Confidence 45678888999999 8999999997665553
No 369
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=24.51 E-value=43 Score=25.54 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=21.4
Q ss_pred ceEEEEcCCC---CCchhhhhhhcccHHHHhhcCcEEEEEc
Q 018952 64 YKIIFVHGFG---SSRHDAAIAANLSPEVVDELGIYIVSFD 101 (348)
Q Consensus 64 ~~vl~~hG~~---~~~~~~~~~~~~~~~l~~~~g~~vi~~D 101 (348)
..||++|... .+..... .+++.+.++ ||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~---~~i~~l~~~-Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALP---TIIKKLKEK-GYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHH---HHHHHHHHC-CCEEEEHH
Confidence 4589999422 2333444 566666665 99988764
No 370
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=24.43 E-value=1.2e+02 Score=21.80 Aligned_cols=28 Identities=14% Similarity=0.087 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHHhCCCCeEEEEEeccchH
Q 018952 118 SLALDIEELADQLGLGSKFYVVGFSMGGQ 146 (348)
Q Consensus 118 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ 146 (348)
+....+.-.+..++. +.++++||+-=|.
T Consensus 41 ~~~~sl~~av~~l~~-~~IiV~gHt~Cg~ 68 (142)
T cd03379 41 DAIRSLVVSVYLLGT-REIIVIHHTDCGM 68 (142)
T ss_pred hHHHHHHHHHHHhCC-CEEEEEeecCCcc
Confidence 456667788888999 8999999984444
No 371
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=23.98 E-value=95 Score=23.14 Aligned_cols=71 Identities=18% Similarity=0.246 Sum_probs=39.9
Q ss_pred EEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCC-------CCccchhhhHHHHHHHHHHhCCCCeEEEE
Q 018952 67 IFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDP-------DPKRTRKSLALDIEELADQLGLGSKFYVV 139 (348)
Q Consensus 67 l~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~-------~~~~~~~~~~~di~~~l~~l~~~~~~~lv 139 (348)
|++.|.|++...-. ++..+|..+ |+.-.+-+|..-.|.. ..+|.++.. ....++.++. +-=+|+
T Consensus 44 vl~cGNGgSaadAq---Hfaael~gR--f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~-~GDvLi 114 (176)
T COG0279 44 VLACGNGGSAADAQ---HFAAELTGR--FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQ-PGDVLI 114 (176)
T ss_pred EEEECCCcchhhHH---HHHHHHhhH--HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCC-CCCEEE
Confidence 66678888777666 677777665 4443344443332311 123333332 3455566665 445888
Q ss_pred EeccchH
Q 018952 140 GFSMGGQ 146 (348)
Q Consensus 140 G~S~Gg~ 146 (348)
|.|.-|.
T Consensus 115 gISTSGN 121 (176)
T COG0279 115 GISTSGN 121 (176)
T ss_pred EEeCCCC
Confidence 8888775
No 372
>PRK10626 hypothetical protein; Provisional
Probab=23.82 E-value=3.4e+02 Score=21.80 Aligned_cols=13 Identities=23% Similarity=0.588 Sum_probs=9.4
Q ss_pred CchhHHHHHHHHH
Q 018952 1 MIREITVILLIGF 13 (348)
Q Consensus 1 m~~~~~~~~l~~~ 13 (348)
|||+.++.+++++
T Consensus 1 ~mrk~~l~~~L~l 13 (239)
T PRK10626 1 MMRKMLLAALLSL 13 (239)
T ss_pred ChHHHHHHHHHHH
Confidence 7888888776543
No 373
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=23.77 E-value=1.3e+02 Score=24.86 Aligned_cols=71 Identities=18% Similarity=0.235 Sum_probs=40.4
Q ss_pred EEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCC------CCCCCCC------------------CccchhhhHHH
Q 018952 67 IFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPG------YGESDPD------------------PKRTRKSLALD 122 (348)
Q Consensus 67 l~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G------~G~S~~~------------------~~~~~~~~~~d 122 (348)
+++-|-.+++.. .+...+++..+..++..|-.- .|...+. ..++..++.++
T Consensus 2 i~i~G~t~~GKs-----~la~~l~~~~~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~f~~~ 76 (287)
T TIGR00174 2 IFIMGPTAVGKS-----QLAIQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAADFQTL 76 (287)
T ss_pred EEEECCCCCCHH-----HHHHHHHHhCCCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHHHHHH
Confidence 455565555444 334667777677788887632 1222111 12356777788
Q ss_pred HHHHHHHhC-CCCeEEEEEec
Q 018952 123 IEELADQLG-LGSKFYVVGFS 142 (348)
Q Consensus 123 i~~~l~~l~-~~~~~~lvG~S 142 (348)
....++.+. .++..+++|.|
T Consensus 77 a~~~i~~~~~~g~~pi~vGGT 97 (287)
T TIGR00174 77 ALNAIADITARGKIPLLVGGT 97 (287)
T ss_pred HHHHHHHHHhCCCCEEEEcCc
Confidence 777777662 23456777654
No 374
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=23.02 E-value=2.1e+02 Score=21.78 Aligned_cols=61 Identities=8% Similarity=0.091 Sum_probs=31.8
Q ss_pred CceEEEEcCCCCCchhhh--hhhcccHHHHhhcCcEEEEEcCCCC---CCCCCCCccchhhhHHHHHHHH
Q 018952 63 KYKIIFVHGFGSSRHDAA--IAANLSPEVVDELGIYIVSFDRPGY---GESDPDPKRTRKSLALDIEELA 127 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~--~~~~~~~~l~~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~di~~~l 127 (348)
+.++++++-.. ...|. ..++.+..|.+. |+.|+-+. +|+ |......-.+++++++.+...+
T Consensus 113 ~~pvvi~Pamn--~~m~~~p~~~~Nl~~L~~~-G~~vi~p~-~g~la~~~~g~g~~~~~~~i~~~v~~~~ 178 (182)
T PRK07313 113 TTPKLIAPAMN--TKMYENPATQRNLKTLKED-GVQEIEPK-EGLLACGDEGYGALADIETILETIENTL 178 (182)
T ss_pred CCCEEEEECCC--HHHhcCHHHHHHHHHHHHC-CCEEECCC-CCccccCCccCCCCCCHHHHHHHHHHHh
Confidence 45677777533 23333 001456666654 87766555 444 4443322236666666665554
No 375
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=22.79 E-value=3.4e+02 Score=20.41 Aligned_cols=55 Identities=22% Similarity=0.261 Sum_probs=33.9
Q ss_pred HhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccchH
Q 018952 90 VDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMGGQ 146 (348)
Q Consensus 90 ~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ 146 (348)
+++.|++.+.+|.-.+=.... ...-..++.+.+.++.+..+. +++.++..|.|..
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~-~~~i~~~~~~~~~~l~~~~~~-~~v~IvSNsaGs~ 90 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY-EDEIPPEYAEWLNELKKQFGK-DRVLIVSNSAGSS 90 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC-cCcCCHHHHHHHHHHHHHCCC-CeEEEEECCCCcc
Confidence 344599999999876522221 111223455555555555555 6899999998743
No 376
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.64 E-value=1.1e+02 Score=24.75 Aligned_cols=22 Identities=14% Similarity=0.077 Sum_probs=18.0
Q ss_pred eEEEEEeccchHHHHHHHHHhh
Q 018952 135 KFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 135 ~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568899999999999887543
No 377
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=22.49 E-value=3.2e+02 Score=20.24 Aligned_cols=57 Identities=16% Similarity=-0.070 Sum_probs=44.0
Q ss_pred EEEEEeCCCCCCChHHHHHHHhhCCCceEEEeCCCCcceeeC-cchHHHHHHHHhccc
Q 018952 287 VHLWQGDEDRLVPVILQRYISKKLPWIRYHEIPGSGHLIADA-DGMTEAIIKALLLGE 343 (348)
Q Consensus 287 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~~ 343 (348)
++++..--|.-.+.+..+++.+.+.+.++..|--+|..+..+ ...+.+.+..++.+.
T Consensus 42 ~i~lG~w~d~G~~d~~~~~fl~~l~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~~ 99 (160)
T PF12641_consen 42 LIFLGFWIDKGTPDKDMKEFLKKLKGKKVALFGTAGAGPDSEYAKKILKNVEALLPKG 99 (160)
T ss_pred EEEEEcCccCCCCCHHHHHHHHHccCCeEEEEEecCCCCchHHHHHHHHHHHHhhccC
Confidence 888887788888888899999999888888886666665555 566777777777654
No 378
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=22.41 E-value=3.1e+02 Score=19.92 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=32.1
Q ss_pred HHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhhcccceeEEeccccc
Q 018952 122 DIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYISHRLTGAALIAPVIN 170 (348)
Q Consensus 122 di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~~il~~~~~~ 170 (348)
++.++++..+. +.++++|-+....+..-........++-.++.+....
T Consensus 89 ~l~~~L~~~gi-~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~s 136 (155)
T cd01014 89 DLEEWLREAGI-DHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACAT 136 (155)
T ss_pred CHHHHHHHCCC-CEEEEEeeccchhHHHHHHHHHHCCCcEEEecccccC
Confidence 57778888999 8999999998765554443333334555666665543
No 379
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.37 E-value=1.1e+02 Score=24.68 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=18.2
Q ss_pred eEEEEEeccchHHHHHHHHHhh
Q 018952 135 KFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 135 ~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3479999999999999987544
No 380
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.13 E-value=1.7e+02 Score=24.33 Aligned_cols=35 Identities=23% Similarity=0.164 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhCC---CCeEEEEEec--cchHHHHHHHHH
Q 018952 120 ALDIEELADQLGL---GSKFYVVGFS--MGGQVVWSCLKY 154 (348)
Q Consensus 120 ~~di~~~l~~l~~---~~~~~lvG~S--~Gg~ia~~~a~~ 154 (348)
+..+.+++++.++ ++++.++|.| ||..+|.++..+
T Consensus 142 p~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~ 181 (296)
T PRK14188 142 PLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAA 181 (296)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhC
Confidence 5667788888764 5899999966 899999888754
No 381
>PRK13938 phosphoheptose isomerase; Provisional
Probab=22.05 E-value=2.4e+02 Score=21.75 Aligned_cols=29 Identities=7% Similarity=0.098 Sum_probs=23.3
Q ss_pred HHhCCCCeEEEEEeccchHHHHHHHHHhh
Q 018952 128 DQLGLGSKFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 128 ~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
+.+.-+++++++|..-.|.+|..++.+..
T Consensus 40 ~~l~~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 40 AGYRAGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred HHHHCCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 33444589999999999999999998753
No 382
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,]. The PP-loop motif appears to be a modified version of the P-loop of nucleotide binding domain that is involved in phosphate binding []. Named PP-motif, since it appears to be a part of a previously uncharacterised ATP pyrophophatase domain. ATP sulfurylases, Escherichia coli NtrL, and Bacillus subtilis OutB consist of this domain alone. In other proteins, the pyrophosphatase domain is associated with amidotransferase domains (type I or type II), a putative citrulline-aspartate ligase domain or a nitrilase/amidase domain.; PDB: 3A2K_A 2E89_B 2E21_D 1WY5_B 1NI5_A.
Probab=22.03 E-value=3.5e+02 Score=20.34 Aligned_cols=80 Identities=18% Similarity=0.257 Sum_probs=43.8
Q ss_pred eEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHH-----HHHHHhCCCCeEEEE
Q 018952 65 KIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIE-----ELADQLGLGSKFYVV 139 (348)
Q Consensus 65 ~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~-----~~l~~l~~~~~~~lv 139 (348)
++-+=||+...+..+. ..+..+.+..|......+..- ......+.+..+..+. ++....+. ..++.
T Consensus 32 ~~~vdh~~~~~s~~~~---~~v~~~~~~~~i~~~~~~~~~----~~~~~~~~e~~aR~~Ry~~l~~~a~~~g~--~~i~~ 102 (182)
T PF01171_consen 32 AVHVDHGLREESDEEA---EFVEEICEQLGIPLYIVRIDE----DRKKGSNIEECARELRYQFLREIAKEEGC--NKIAL 102 (182)
T ss_dssp EEEEE-STSCCHHHHH---HHHHHHHHHTT-EEEEEE--C----HCCTTSTCHHHHHHHHHHHHHHHHHTTT---CEEE-
T ss_pred EEEEecCCCcccchhH---HHHHHHHHhcCCceEEEEeee----eecccCCHHHHHHHHHHHHHHHhhhcccc--cceee
Confidence 4445578887777777 788888888776655555443 1111223444444433 33444444 68899
Q ss_pred EeccchHHHHHHHH
Q 018952 140 GFSMGGQVVWSCLK 153 (348)
Q Consensus 140 G~S~Gg~ia~~~a~ 153 (348)
||..-=.+-..+..
T Consensus 103 GHh~dD~~ET~l~~ 116 (182)
T PF01171_consen 103 GHHLDDQAETFLMN 116 (182)
T ss_dssp --BHHHHHHHHHHH
T ss_pred cCcCCccHHHHHHH
Confidence 99988887766654
No 383
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=21.92 E-value=3.1e+02 Score=21.90 Aligned_cols=71 Identities=11% Similarity=0.213 Sum_probs=42.9
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHH-HHHHHHHhCCCCeEEEEEe
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALD-IEELADQLGLGSKFYVVGF 141 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~d-i~~~l~~l~~~~~~~lvG~ 141 (348)
.|.||++.|+.+++..-.+ ..++.. .+.+|++|.++..| +.++...+ +-.+-+.+.....+.++=-
T Consensus 30 ~~vlIv~eG~DaAGKg~~I-~~l~~~-lDPRg~~v~~~~~p-----------t~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTI-KRITEH-LNPRGARVVALPKP-----------SDRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCEEEEEeCCCCCCchHHH-HHHHHh-cCCCeeEEEeCCCC-----------CHHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 5899999999887665331 022222 23347888887655 33333333 5566677755467888877
Q ss_pred ccchH
Q 018952 142 SMGGQ 146 (348)
Q Consensus 142 S~Gg~ 146 (348)
|+=+-
T Consensus 97 SwY~~ 101 (230)
T TIGR03707 97 SWYNR 101 (230)
T ss_pred chhhh
Confidence 76444
No 384
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=21.92 E-value=2.1e+02 Score=20.42 Aligned_cols=30 Identities=13% Similarity=0.238 Sum_probs=20.9
Q ss_pred HHhCCCCeEEEEEeccchHHHHHHHHHhhc
Q 018952 128 DQLGLGSKFYVVGFSMGGQVVWSCLKYISH 157 (348)
Q Consensus 128 ~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 157 (348)
+.+.-+.+++++|..-.+.++.+++.+...
T Consensus 30 ~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~ 59 (138)
T PF13580_consen 30 EALRNGGRIFVCGNGHSAAIASHFAADLGG 59 (138)
T ss_dssp HHHHTT--EEEEESTHHHHHHHHHHHHHHC
T ss_pred HHHHCCCEEEEEcCchhhhHHHHHHHHHhc
Confidence 333345799999988888889999887653
No 385
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=21.69 E-value=2.6e+02 Score=20.68 Aligned_cols=42 Identities=21% Similarity=0.422 Sum_probs=27.0
Q ss_pred cEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEEeccc
Q 018952 95 IYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVGFSMG 144 (348)
Q Consensus 95 ~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG~S~G 144 (348)
-.+|+.|-+|- ..+-+++++.+....+. +..+-+.+||-+.|
T Consensus 68 ~~~i~LDe~Gk-------~~sS~~fA~~l~~~~~~-g~~~i~F~IGGa~G 109 (157)
T PRK00103 68 ARVIALDERGK-------QLSSEEFAQELERWRDD-GRSDVAFVIGGADG 109 (157)
T ss_pred CEEEEEcCCCC-------cCCHHHHHHHHHHHHhc-CCccEEEEEcCccc
Confidence 35888998874 23556677777666433 22246788888887
No 386
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=21.49 E-value=80 Score=24.91 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=23.6
Q ss_pred ceEEEEcCC-CCCchhhhhhhcccHHHHhhcCcEEEEEc
Q 018952 64 YKIIFVHGF-GSSRHDAAIAANLSPEVVDELGIYIVSFD 101 (348)
Q Consensus 64 ~~vl~~hG~-~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 101 (348)
..||++|.. ..+..... .+++.|.++ ||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~---~ii~~lk~~-Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALD---KIIKDLKEQ-GYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHH---HHHHHHHHC-CCEEEEhH
Confidence 468999974 34445555 667777665 99998875
No 387
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=21.42 E-value=2.1e+02 Score=23.27 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhh
Q 018952 118 SLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 118 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
.+++.+..+.+.+.-+.+++++|..-.|.++..-|...+
T Consensus 34 ~I~~av~~~~~~l~~ggrl~~~GaGtSg~la~~da~e~~ 72 (257)
T cd05007 34 QIARAVDAAAERLRAGGRLIYVGAGTSGRLGVLDASELP 72 (257)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEcCcHHHHHHHHHHHhcc
Confidence 444445555555544579999999999999977666544
No 388
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=21.36 E-value=1.2e+02 Score=27.21 Aligned_cols=51 Identities=24% Similarity=0.278 Sum_probs=31.1
Q ss_pred cCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeE-----EEEEeccchHHHHHHHHH
Q 018952 93 LGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKF-----YVVGFSMGGQVVWSCLKY 154 (348)
Q Consensus 93 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~-----~lvG~S~Gg~ia~~~a~~ 154 (348)
+|.+++.+|--|. .. -.+-++..-++.+.- +++ .+.|.|.||++|..+..+
T Consensus 415 ~G~rILSiDGGGt--rG--------~~~lqiL~kieklsg-KpIheLFD~ICGvSTG~ilA~~Lg~k 470 (763)
T KOG4231|consen 415 QGLRILSIDGGGT--RG--------LATLQILKKIEKLSG-KPIHELFDLICGVSTGGILAIALGVK 470 (763)
T ss_pred CceEEEEecCCCc--cc--------hhHHHHHHHHHHhcC-CcHHHHHHHHhccCchHHHHHHHHhc
Confidence 4888999985543 11 122223333334432 444 578999999999988764
No 389
>PLN02200 adenylate kinase family protein
Probab=21.30 E-value=1.6e+02 Score=23.50 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=23.5
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEE
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSF 100 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~ 100 (348)
.|.++++.|.++++..- +...++++.|+..+..
T Consensus 42 ~~~ii~I~G~PGSGKsT-----~a~~La~~~g~~his~ 74 (234)
T PLN02200 42 TPFITFVLGGPGSGKGT-----QCEKIVETFGFKHLSA 74 (234)
T ss_pred CCEEEEEECCCCCCHHH-----HHHHHHHHhCCeEEEc
Confidence 46788999999887763 3567777767655554
No 390
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=21.26 E-value=4.7e+02 Score=21.58 Aligned_cols=26 Identities=12% Similarity=0.060 Sum_probs=13.9
Q ss_pred HHHHHHHhCCCCeEEEEEeccchHHH
Q 018952 123 IEELADQLGLGSKFYVVGFSMGGQVV 148 (348)
Q Consensus 123 i~~~l~~l~~~~~~~lvG~S~Gg~ia 148 (348)
+...++..+.++++.++=|+-||.+.
T Consensus 80 v~raI~~~~~~~~IdLii~TpGG~v~ 105 (285)
T PF01972_consen 80 VLRAIREAPKDKPIDLIIHTPGGLVD 105 (285)
T ss_pred HHHHHHhcCCCCceEEEEECCCCcHH
Confidence 33333333333566666677777654
No 391
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=21.22 E-value=1.4e+02 Score=23.49 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=20.4
Q ss_pred eEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCC
Q 018952 65 KIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRP 103 (348)
Q Consensus 65 ~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~ 103 (348)
.=+|++|-|-+.... .|+++ ||+|+.+|+-
T Consensus 39 ~rvLvPgCG~g~D~~--------~La~~-G~~VvGvDls 68 (218)
T PF05724_consen 39 GRVLVPGCGKGYDML--------WLAEQ-GHDVVGVDLS 68 (218)
T ss_dssp EEEEETTTTTSCHHH--------HHHHT-TEEEEEEES-
T ss_pred CeEEEeCCCChHHHH--------HHHHC-CCeEEEEecC
Confidence 457888877665442 35554 9999999973
No 392
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=21.21 E-value=2e+02 Score=22.66 Aligned_cols=43 Identities=23% Similarity=0.366 Sum_probs=28.5
Q ss_pred HHHHHHHh--CCCCeEEEEEeccch----HHHHHHHHHhhcccceeEEecc
Q 018952 123 IEELADQL--GLGSKFYVVGFSMGG----QVVWSCLKYISHRLTGAALIAP 167 (348)
Q Consensus 123 i~~~l~~l--~~~~~~~lvG~S~Gg----~ia~~~a~~~p~~v~~~il~~~ 167 (348)
+.++|..+ |.+.+.++.-+|-|+ .+++..|+++. =.++|++-|
T Consensus 29 ~aEfISAlAAG~nAkliVe~~s~g~~~~ttiaLaaAAr~T--gGR~vCIvp 77 (218)
T PF07279_consen 29 VAEFISALAAGWNAKLIVEAWSSGGAISTTIALAAAARQT--GGRHVCIVP 77 (218)
T ss_pred HHHHHHHHhccccceEEEEEecCCCchHhHHHHHHHHHhc--CCeEEEEcC
Confidence 45666665 666899999999886 45566666653 345566665
No 393
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=21.15 E-value=5.9e+02 Score=22.65 Aligned_cols=72 Identities=11% Similarity=0.076 Sum_probs=42.9
Q ss_pred cHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEEE-eccchHHHHHHHHHhh-cccceeE
Q 018952 86 SPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVVG-FSMGGQVVWSCLKYIS-HRLTGAA 163 (348)
Q Consensus 86 ~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lvG-~S~Gg~ia~~~a~~~p-~~v~~~i 163 (348)
+..+.+..+++++.+|-.|.-. .-....+.+..+++.... ..++|+- -++++.-+...+..+. -.++++|
T Consensus 312 L~~lk~~~~~DvVLIDTaGRs~-------kd~~lm~EL~~~lk~~~P-devlLVLsATtk~~d~~~i~~~F~~~~idglI 383 (436)
T PRK11889 312 LTYFKEEARVDYILIDTAGKNY-------RASETVEEMIETMGQVEP-DYICLTLSASMKSKDMIEIITNFKDIHIDGIV 383 (436)
T ss_pred HHHHHhccCCCEEEEeCccccC-------cCHHHHHHHHHHHhhcCC-CeEEEEECCccChHHHHHHHHHhcCCCCCEEE
Confidence 3444433368999999887622 112445556666665554 4566653 3456666666666543 3577887
Q ss_pred Ee
Q 018952 164 LI 165 (348)
Q Consensus 164 l~ 165 (348)
+.
T Consensus 384 ~T 385 (436)
T PRK11889 384 FT 385 (436)
T ss_pred EE
Confidence 75
No 394
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=21.12 E-value=2.9e+02 Score=22.60 Aligned_cols=71 Identities=15% Similarity=0.253 Sum_probs=42.1
Q ss_pred CceEEEEcCCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHH-HHHHHHHhCCCCeEEEEEe
Q 018952 63 KYKIIFVHGFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALD-IEELADQLGLGSKFYVVGF 141 (348)
Q Consensus 63 ~~~vl~~hG~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~d-i~~~l~~l~~~~~~~lvG~ 141 (348)
.|+||++.|+.+++..-.+ ..++.. .+.+|++|.++..| +-++...+ +-.+-.++.....+.++=-
T Consensus 55 ~~vlIv~eG~DaAGKG~~I-~~l~~~-lDPRg~~V~s~~~P-----------t~eE~~~p~lWRfw~~lP~~G~i~IF~R 121 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTI-RHVMSG-VNPQGCQVTSFKAP-----------SAEELDHDFLWRIHKALPERGEIGIFNR 121 (264)
T ss_pred CcEEEEEECCCCCCchHHH-HHHHHh-cCCCeeEEEeCCCC-----------CHHHHcCchHHHHHHhCCCCCeEEEEcC
Confidence 5899999999887665331 022222 33358889888554 22233322 5556666654467777766
Q ss_pred ccchH
Q 018952 142 SMGGQ 146 (348)
Q Consensus 142 S~Gg~ 146 (348)
|+=+-
T Consensus 122 SWY~~ 126 (264)
T TIGR03709 122 SHYED 126 (264)
T ss_pred ccccc
Confidence 65433
No 395
>PF06626 DUF1152: Protein of unknown function (DUF1152); InterPro: IPR010581 This family consists of several hypothetical archaeal proteins of unknown function.
Probab=20.95 E-value=4.9e+02 Score=21.81 Aligned_cols=45 Identities=31% Similarity=0.486 Sum_probs=32.0
Q ss_pred cccHHHHhhcCcEEEEEcCCCCCCCCCCCccchhhhHHHHHHHHHHhCCCCeEEEE
Q 018952 84 NLSPEVVDELGIYIVSFDRPGYGESDPDPKRTRKSLALDIEELADQLGLGSKFYVV 139 (348)
Q Consensus 84 ~~~~~l~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~di~~~l~~l~~~~~~~lv 139 (348)
+++...++..|-.++++|..+ ....+++.+.++++++++ +.+++|
T Consensus 80 pqla~~~~~l~~~v~~~d~~~----------Gv~~l~~al~~l~~~~~i-D~Ii~V 124 (297)
T PF06626_consen 80 PQLARVLRALGEPVYAFDPTG----------GVQGLARALRELAEKLGI-DAIILV 124 (297)
T ss_pred hHHHHHHHhcCCcEEEECCCC----------CcHHHHHHHHHHHHHcCC-CEEEEE
Confidence 444445555566799999653 456789999999999998 555544
No 396
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=20.79 E-value=2.1e+02 Score=23.89 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHHhCCCCeEEEEEeccchHHHHHHHHHhh
Q 018952 118 SLALDIEELADQLGLGSKFYVVGFSMGGQVVWSCLKYIS 156 (348)
Q Consensus 118 ~~~~di~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p 156 (348)
.+.+.+..+.+.+..+++++++|..-.|.++...|...+
T Consensus 47 ~I~~av~~~~~~l~~ggrI~~~GaGtSg~la~~da~e~~ 85 (299)
T PRK05441 47 QIAAAVDAAAAALRQGGRLIYIGAGTSGRLGVLDASECP 85 (299)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhCc
Confidence 444445555566655579999999999999966665433
No 397
>TIGR02738 TrbB type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold, contains a conserved pair of cysteines and has been shown to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. The protein is closely related to TraF (TIGR02739) which is somewhat longer, lacks the cysteine motif and is apparently not functional as a disulfide bond isomerase.
Probab=20.71 E-value=2.6e+02 Score=20.53 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=21.8
Q ss_pred EEEEc-CCCCCchhhhhhhcccHHHHhhcCcEEEEEcCCC
Q 018952 66 IIFVH-GFGSSRHDAAIAANLSPEVVDELGIYIVSFDRPG 104 (348)
Q Consensus 66 vl~~h-G~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D~~G 104 (348)
||.+- .|......-. +.+..+.++.|+.|+.++..+
T Consensus 54 lvnFWAsWCppCr~e~---P~L~~l~~~~~~~Vi~Vs~d~ 90 (153)
T TIGR02738 54 LVFFYQSTCPYCHQFA---PVLKRFSQQFGLPVYAFSLDG 90 (153)
T ss_pred EEEEECCCChhHHHHH---HHHHHHHHHcCCcEEEEEeCC
Confidence 44443 4444444444 667778777778888876543
No 398
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=20.52 E-value=2.1e+02 Score=18.76 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=19.6
Q ss_pred ccceeecCCCeEEEEeeccCCccCCCceEEEEcCCCC
Q 018952 38 TAPRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGS 74 (348)
Q Consensus 38 ~~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~ 74 (348)
.+-++...++.++.|...+ +..+|++||+.=
T Consensus 48 ~ElR~r~g~~yRiif~~~~------~~~vvll~gf~K 78 (95)
T TIGR02683 48 SELRIDFGPGYRVYFTQRG------KVIILLLCGGDK 78 (95)
T ss_pred EEEEecCCCCEEEEEEEEC------CEEEEEEeCEec
Confidence 3444555347788776663 347889998653
No 399
>PF02630 SCO1-SenC: SCO1/SenC; InterPro: IPR003782 This family is involved in biogenesis of respiratory and photosynthetic systems. In yeast the SCO1 protein is specifically required for a post-translational step in the accumulation of subunits 1 and 2 of cytochrome c oxidase (COXI and COX-II) []. It is a mitochondrion-associated cytochrome c oxidase assembly factor. The purple nonsulphur photosynthetic eubacterium Rhodobacter capsulatus is a versatile organism that can obtain cellular energy by several means, including the capture of light energy for photosynthesis as well as the use of light-independent respiration, in which molecular oxygen serves as a terminal electron acceptor. The SenC protein is required for optimal cytochrome c oxidase activity in aerobically grown R. capsulatus cells and is involved in the induction of structural polypeptides of the light-harvesting and reaction centre complexes [].; PDB: 2K6V_A 3ME8_A 3ME7_A 2GT6_A 2GQL_A 2GQK_A 2GGT_B 1WP0_C 2HRN_A 2GQM_A ....
Probab=20.32 E-value=1.7e+02 Score=22.01 Aligned_cols=35 Identities=9% Similarity=0.180 Sum_probs=17.9
Q ss_pred cceeecCCCeEEEEeeccCCccCCCceEEEEcCCCCCchhh
Q 018952 39 APRIKLRDGRHLAYKEHGVSKELAKYKIIFVHGFGSSRHDA 79 (348)
Q Consensus 39 ~~~~~~~~g~~l~y~~~g~~~~~~~~~vl~~hG~~~~~~~~ 79 (348)
.-.+...+|..+..... . +.++|+.-|+.......
T Consensus 34 ~f~L~d~~G~~~~~~~~-~-----Gk~~lv~F~yT~CpdvC 68 (174)
T PF02630_consen 34 DFTLTDQDGKTVTLDDL-K-----GKWVLVFFGYTRCPDVC 68 (174)
T ss_dssp T-EEEETTSSEEEGGGG-T-----TSEEEEEEE-TTSSSHH
T ss_pred CcEEEcCCCCEecHHHh-C-----CCeEEEEEEEcCCCccC
Confidence 34555667887765443 2 23555555666554443
No 400
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=20.10 E-value=1.5e+02 Score=20.77 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=17.0
Q ss_pred CCceEEEEc-CCCCCchhhhhhhcccHHHHhhcCcEEEEEc
Q 018952 62 AKYKIIFVH-GFGSSRHDAAIAANLSPEVVDELGIYIVSFD 101 (348)
Q Consensus 62 ~~~~vl~~h-G~~~~~~~~~~~~~~~~~l~~~~g~~vi~~D 101 (348)
.++.|+++. |...+...| .+++..||+|..+|
T Consensus 86 ~~~vvvyC~~~G~rs~~a~--------~~L~~~G~~v~~L~ 118 (128)
T cd01520 86 DPKLLIYCARGGMRSQSLA--------WLLESLGIDVPLLE 118 (128)
T ss_pred CCeEEEEeCCCCccHHHHH--------HHHHHcCCceeEeC
Confidence 457778885 333333222 34455688765443
Done!