Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>018954
MFEPQHFVDLQDNSAFGDSKSSWLTGDGNSSPTQRGAAQPSLGYSGATNSNVDRDLYKDL
VEIVPLVQSLIDRKASSSFTRRGSMIYTKTPSRESLLKKTTDPKGRNAAQSLPPKRKKDN
GDKDLGKNANSNQDSDSFSIFSSRALVSEKEIEELVALREQVEDLQRKMFEKDELLKSLE
SSKSQVNAVHLKLDELKRLAAEKDSLIKSTQLQLSDAKIKLADKQAALEKSQWEAMTVSR
KAEKLQEEVESMQGEMSSFMQIFEGLIKNDSTVNADDDYDIKPYYSDYLSDIDDLDDVEM
QRMEEAREAYITAVAMAKEKQDEESMATAARARLHLQSFVFRNSRRES

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018954
        (348 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2181534 - symbol:MPB2C "movement protein bindi...   654  3.7e-64   1


>TAIR|locus:2181534 [details] [associations]
            symbol:MPB2C "movement protein binding protein 2C"
            species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0009414
            "response to water deprivation" evidence=IMP] [GO:0010375 "stomatal
            complex patterning" evidence=IMP] [GO:0010497
            "plasmodesmata-mediated intercellular transport" evidence=IMP]
            [GO:0043622 "cortical microtubule organization" evidence=IMP]
            [GO:0051607 "defense response to virus" evidence=IMP] EMBL:CP002688
            GO:GO:0015630 GO:GO:0009414 GO:GO:0051607 EMBL:AL357612
            GO:GO:0043622 GO:GO:0010497 GO:GO:0010375 EMBL:AF370224
            EMBL:AY117260 IPI:IPI00527442 PIR:T50497 RefSeq:NP_196429.1
            UniGene:At.22525 PRIDE:Q9LEZ4 DNASU:830707
            EnsemblPlants:AT5G08120.1 GeneID:830707 KEGG:ath:AT5G08120
            TAIR:At5g08120 HOGENOM:HOG000005955 InParanoid:Q9LEZ4 OMA:SLEKLEW
            PhylomeDB:Q9LEZ4 ProtClustDB:CLSN2687264 ArrayExpress:Q9LEZ4
            Genevestigator:Q9LEZ4 Uniprot:Q9LEZ4
        Length = 326

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 154/342 (45%), Positives = 207/342 (60%)

Query:     1 MFEPQ-HFVDLQDNSAFGDSKSSWLTGDGNSSPTQRGAAQPSLGYSGATNSNVDRDLYKD 59
             M+E Q HF+DLQ +S FGD  SSWL GD +     R +   S   + + N N+DR L KD
Sbjct:     1 MYEQQQHFMDLQSDSGFGDD-SSWLAGDDDL----RLSPHQSAAGTNSGNENLDRRLLKD 55

Query:    60 LVEIVPLVQSLIDRKASSSFTRRGSMIYTKTPSRESLLKKTTDPKGRNAAQSLPPXXXXX 119
             LVE+VPL++  ++ K  SSF RRGSMIYTK PS+ESL ++     GRNA+Q++P      
Sbjct:    56 LVEMVPLIEHYMEHKERSSFKRRGSMIYTKMPSKESLSRR-----GRNASQTVP-GRKKR 109

Query:   120 XXXXXXXXXXXSNQDSDSFSIFSSRALVSEKEIEELVALREQVEDLQRKMFXXXXXXXXX 179
                        S +D ++     ++AL   ++ EE+  LREQV DLQ K+          
Sbjct:   110 DQEGNDDVMNNSREDDEN-----AKALAGAEK-EEMSRLREQVNDLQTKLSEKEEVLKSM 163

Query:   180 XXXXXQVNAVHLKLDELKRLAAEKDSLIKSTQLQLSDAKIKLADKQAALEKSQWEAMTVS 239
                  QVN +  KL+   RL AEKD LIKS QLQLSD KIKLADKQAALEK+QWEA T  
Sbjct:   164 EMSKNQVNEIQEKLEATNRLVAEKDMLIKSMQLQLSDTKIKLADKQAALEKTQWEAKTTG 223

Query:   240 RKAEKLQEEVESMQGEMSSFMQIFEGLIKNDSTVNADDDYDIKPXXXXXXXXXXXXXXVE 299
              +A KLQE++++++G++S+F ++FE L K DS    D DYD  P               +
Sbjct:   224 TRAIKLQEQLDAVEGDISTFTRVFETLAKTDSK-KPDRDYDAVPYEFDHLPYLDDVDETD 282

Query:   300 MQRMEEAREAYITAVAMAKEKQDEESMATAARARLHLQSFVF 341
             +++MEEAR AY+ AV  AKE++DEES+  AA+AR +LQS  F
Sbjct:   283 LRKMEEARLAYVAAVNTAKEREDEESLVMAAQARAYLQSLAF 324


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.124   0.326    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      348       304   0.00098  115 3  10 23  0.47    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  261 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  42.74u 0.15s 42.89t   Elapsed:  00:00:02
  Total cpu time:  42.75u 0.15s 42.90t   Elapsed:  00:00:02
  Start:  Fri May 10 12:43:50 2013   End:  Fri May 10 12:43:52 2013

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