BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018957
(348 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17614|ATPBM_NICPL ATP synthase subunit beta, mitochondrial OS=Nicotiana
plumbaginifolia GN=ATPB PE=1 SV=1
Length = 560
Score = 546 bits (1407), Expect = e-155, Method: Compositional matrix adjust.
Identities = 284/349 (81%), Positives = 307/349 (87%), Gaps = 8/349 (2%)
Query: 1 MASRRLLSSLLRSSVRRSPS--KSSLSNS-SVFSPAATRRASPYGHLLSRVSEYATSAAA 57
MASRRLL+SLLR S +R SL NS + A+ RASP G LL+R +YATSAAA
Sbjct: 1 MASRRLLASLLRQSAQRGGGLISRSLGNSIPKSASRASSRASPKGFLLNRAVQYATSAAA 60
Query: 58 TAPPAQTPKSDVKKGG--GGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEV 115
PA P + K G GKITDEFTG G+IG+VCQVIGAVVDVRFDEGLPPILTALEV
Sbjct: 61 ---PASQPSTPPKSGSEPSGKITDEFTGAGSIGKVCQVIGAVVDVRFDEGLPPILTALEV 117
Query: 116 VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVI 175
+D+ +RLVLEVAQH+GE +VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR TLGRI+NVI
Sbjct: 118 LDNQIRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIINVI 177
Query: 176 GEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGA 235
GE IDE+G + T+H+LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGA
Sbjct: 178 GEAIDERGPITTDHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGA 237
Query: 236 GVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQADSKCA 295
GVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLG+KQ++SKCA
Sbjct: 238 GVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCA 297
Query: 296 LVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQVS 344
LVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQ +
Sbjct: 298 LVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQAN 346
>sp|Q01859|ATPBM_ORYSJ ATP synthase subunit beta, mitochondrial OS=Oryza sativa subsp.
japonica GN=ATPB PE=1 SV=2
Length = 552
Score = 538 bits (1387), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/345 (81%), Positives = 302/345 (87%), Gaps = 8/345 (2%)
Query: 1 MASRRLLSSLLRSSVR-RSPSKSSLSNSSVFSPAATRRASPYGHLLSRVSEYATSAAATA 59
MA+RR LSSL+R++ R R S + + P SP G+L +R + YAT+AAA
Sbjct: 1 MATRRALSSLVRAASRLRGASPAPRPRGPLHRP------SPSGYLFNRAAAYATAAAAKE 54
Query: 60 PPAQTPKSDVKKGGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHS 119
P + GGG KITDEFTG GA+GQVCQVIGAVVDVRFDEGLPPILTALEV+DH+
Sbjct: 55 AAPPAPATGKATGGG-KITDEFTGAGAVGQVCQVIGAVVDVRFDEGLPPILTALEVLDHN 113
Query: 120 VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPI 179
+RLVLEVAQH+GE +VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR TLGRIMNVIGEPI
Sbjct: 114 IRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPI 173
Query: 180 DEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGK 239
DEKGD+ T H+LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGK
Sbjct: 174 DEKGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGK 233
Query: 240 TVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQADSKCALVYG 299
TVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQ++SKCALVYG
Sbjct: 234 TVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQSESKCALVYG 293
Query: 300 QMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQVS 344
QMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQ +
Sbjct: 294 QMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQAN 338
>sp|P19023|ATPBM_MAIZE ATP synthase subunit beta, mitochondrial OS=Zea mays GN=ATPB PE=2
SV=1
Length = 553
Score = 532 bits (1371), Expect = e-150, Method: Compositional matrix adjust.
Identities = 283/344 (82%), Positives = 304/344 (88%), Gaps = 5/344 (1%)
Query: 1 MASRRLLSSLLRSSVRRSPSKSSLSNSSVFSPAATRRASPYGHLLSRVSEYATSAAATAP 60
MASRR++SSLLRS+ R + + A R SP G+L +R + YA+SAAA A
Sbjct: 1 MASRRVVSSLLRSASRLRAASPAAPRPR----APPHRPSPAGYLFNRAAAYASSAAAQAA 56
Query: 61 PAQTPKSDVKKGGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSV 120
PA K GGGKITDEFTG GAIGQVCQVIGAVVDVRFDEGLPPILTALEV+D+++
Sbjct: 57 PATP-PPATGKTGGGKITDEFTGAGAIGQVCQVIGAVVDVRFDEGLPPILTALEVLDNNI 115
Query: 121 RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPID 180
RLVLEVAQH+GE +VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR TLGRI+NVIGEPID
Sbjct: 116 RLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIINVIGEPID 175
Query: 181 EKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKT 240
EKGD+KT H+LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKT
Sbjct: 176 EKGDIKTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKT 235
Query: 241 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQ 300
VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKL DKQ++SKCALVYGQ
Sbjct: 236 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLDDKQSESKCALVYGQ 295
Query: 301 MNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQVS 344
MNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQ +
Sbjct: 296 MNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQAN 339
>sp|P29685|ATPBM_HEVBR ATP synthase subunit beta, mitochondrial OS=Hevea brasiliensis
GN=ATPB PE=2 SV=1
Length = 562
Score = 516 bits (1330), Expect = e-146, Method: Compositional matrix adjust.
Identities = 271/305 (88%), Positives = 283/305 (92%)
Query: 40 PYGHLLSRVSEYATSAAATAPPAQTPKSDVKKGGGGKITDEFTGKGAIGQVCQVIGAVVD 99
PYG+LL+R +EYATSAAA APP P GGGKITDEFTGKGAIGQVCQVIGAVVD
Sbjct: 44 PYGYLLTRAAEYATSAAAAAPPQPPPAKPEGGKGGGKITDEFTGKGAIGQVCQVIGAVVD 103
Query: 100 VRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPI 159
VRFDEGLPPILT+LEV+DHS+RLVLEVAQHMGEG+VRTIAMDGTEGLVRGQRVLNTGSPI
Sbjct: 104 VRFDEGLPPILTSLEVLDHSIRLVLEVAQHMGEGMVRTIAMDGTEGLVRGQRVLNTGSPI 163
Query: 160 TVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDL 219
TVPVGR VIGEPIDE+GD+KT H+LPIHREAPAFV+QATEQQILVTGIKVVDL
Sbjct: 164 TVPVGRANPWTYHEVIGEPIDERGDIKTSHFLPIHREAPAFVDQATEQQILVTGIKVVDL 223
Query: 220 LAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIE 279
LAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIE
Sbjct: 224 LAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIE 283
Query: 280 SGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 339
SGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR
Sbjct: 284 SGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 343
Query: 340 FTQVS 344
FTQ +
Sbjct: 344 FTQAN 348
>sp|Q9C5A9|ATPBO_ARATH ATP synthase subunit beta-3, mitochondrial OS=Arabidopsis thaliana
GN=At5g08680 PE=2 SV=1
Length = 559
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/322 (77%), Positives = 282/322 (87%), Gaps = 8/322 (2%)
Query: 26 NSSVFSPAATRRASPYGHLLSRVSEYATSAAA-TAPPAQTPKSDVKKGGGGKITDEFTGK 84
N + SP A+P G LL RV+EY+TS+ A +A P+ P D GK T ++ GK
Sbjct: 29 NPRLLSPGPAHGAAPCGTLLGRVAEYSTSSPANSAAPSSAPAKDE-----GKKTYDYGGK 83
Query: 85 GAIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDG 142
GAIG+VCQVIGA+VDVRF+ EGLPPI+T+LEV DH RLVLEV+ H+G+ VVRTIAMDG
Sbjct: 84 GAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDG 143
Query: 143 TEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVE 202
TEGLVRG++VLNTG+PITVPVGR TLGRIMNV+GEPIDE+G++KTEHYLPIHR+APA V+
Sbjct: 144 TEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVD 203
Query: 203 QATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG 262
AT Q+IL TGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG
Sbjct: 204 LATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG 263
Query: 263 VGERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHF 322
VGERTREGNDLYREMIESGVIKLG+KQ++SKCALVYGQMNEPPGARARVGLTGLTVAE+F
Sbjct: 264 VGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYF 323
Query: 323 RDAEGQDVLLFIDNIFRFTQVS 344
RDAEGQDVLLFIDNIFRFTQ +
Sbjct: 324 RDAEGQDVLLFIDNIFRFTQAN 345
>sp|P37399|ATPBM_DAUCA ATP synthase subunit beta, mitochondrial OS=Daucus carota GN=ATPB
PE=3 SV=1
Length = 547
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/350 (73%), Positives = 286/350 (81%), Gaps = 22/350 (6%)
Query: 1 MASRRLLSSLLRSSVRRS--PS----KSSLSNSSVFSPAATRRASPYGHLLSRVSEYATS 54
MASRRLLSS LRSS RRS PS + S S SPA+ R YAT+
Sbjct: 1 MASRRLLSSFLRSSTRRSLRPSFSNPRPSFLTSYCSSPASILR------------RYATA 48
Query: 55 AAATAPPAQTPKSDVKKGGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALE 114
A A P A P + G G ITDE TG GAIGQVCQ+IGAVVDV+F+EGLPPI+TALE
Sbjct: 49 APAKEPAASKP-AGTAGTGKGTITDEKTGAGAIGQVCQIIGAVVDVKFEEGLPPIMTALE 107
Query: 115 VVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNV 174
V+D +RLVLEVA +GE VRTIAMDGTEGLVRGQ+VLNTG+PIT+PVGR TLGRI+NV
Sbjct: 108 VIDFEIRLVLEVAPSLGENTVRTIAMDGTEGLVRGQKVLNTGAPITIPVGRATLGRIINV 167
Query: 175 IGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGG 234
IGEPID +G++KT+ YLPIHREAP FV+QATEQQILVTGIKVVDLLAPYQ+GGKIGLFGG
Sbjct: 168 IGEPIDHRGEIKTDQYLPIHREAPTFVDQATEQQILVTGIKVVDLLAPYQKGGKIGLFGG 227
Query: 235 AGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQADSKC 294
VGKTVLIMELINNVAKAH +VFAGVGERTREGNDLY+EM+ESGVIKLGD+QA+SKC
Sbjct: 228 DWVGKTVLIMELINNVAKAH---AVFAGVGERTREGNDLYKEMMESGVIKLGDQQAESKC 284
Query: 295 ALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQVS 344
ALVYGQMNEPPG+RARVGLTGLTVAEHFRDAEG+DVLLF+D FRFTQ +
Sbjct: 285 ALVYGQMNEPPGSRARVGLTGLTVAEHFRDAEGEDVLLFVDKRFRFTQAN 334
>sp|P83483|ATPBM_ARATH ATP synthase subunit beta-1, mitochondrial OS=Arabidopsis thaliana
GN=At5g08670 PE=1 SV=1
Length = 556
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/321 (76%), Positives = 283/321 (88%), Gaps = 6/321 (1%)
Query: 26 NSSVFSPAATRRASPYGHLLSRVSEYATSAAATAPPAQTPKSDVKKGGGGKITDEFTGKG 85
N + SP+ R A+P +LL RV+EYATS+ A++ + + + GK T ++ GKG
Sbjct: 26 NPRLPSPSPARHAAPCSYLLGRVAEYATSSPASSAAPSSAPAKDE----GKKTYDYGGKG 81
Query: 86 AIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGT 143
AIG+VCQVIGA+VDVRF+ EGLPPI+T+LEV DH RLVLEV+ H+G+ VVRTIAMDGT
Sbjct: 82 AIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGT 141
Query: 144 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQ 203
EGLVRG++VLNTG+PITVPVGR TLGRIMNV+GEPIDE+G++KTEHYLPIHR+APA V+
Sbjct: 142 EGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDL 201
Query: 204 ATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 263
AT Q+IL TGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV
Sbjct: 202 ATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 261
Query: 264 GERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFR 323
GERTREGNDLYREMIESGVIKLG+KQ++SKCALVYGQMNEPPGARARVGLTGLTVAE+FR
Sbjct: 262 GERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFR 321
Query: 324 DAEGQDVLLFIDNIFRFTQVS 344
DAEGQDVLLFIDNIFRFTQ +
Sbjct: 322 DAEGQDVLLFIDNIFRFTQAN 342
>sp|P83484|ATPBN_ARATH ATP synthase subunit beta-2, mitochondrial OS=Arabidopsis thaliana
GN=At5g08690 PE=1 SV=1
Length = 556
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/321 (76%), Positives = 283/321 (88%), Gaps = 6/321 (1%)
Query: 26 NSSVFSPAATRRASPYGHLLSRVSEYATSAAATAPPAQTPKSDVKKGGGGKITDEFTGKG 85
N + SP+ R A+P +LL RV+EYATS+ A++ + + + GK T ++ GKG
Sbjct: 26 NPRLPSPSPARHAAPCSYLLGRVAEYATSSPASSAAPSSAPAKDE----GKKTYDYGGKG 81
Query: 86 AIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGT 143
AIG+VCQVIGA+VDVRF+ EGLPPI+T+LEV DH RLVLEV+ H+G+ VVRTIAMDGT
Sbjct: 82 AIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGT 141
Query: 144 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQ 203
EGLVRG++VLNTG+PITVPVGR TLGRIMNV+GEPIDE+G++KTEHYLPIHR+APA V+
Sbjct: 142 EGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDL 201
Query: 204 ATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 263
AT Q+IL TGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV
Sbjct: 202 ATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 261
Query: 264 GERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFR 323
GERTREGNDLYREMIESGVIKLG+KQ++SKCALVYGQMNEPPGARARVGLTGLTVAE+FR
Sbjct: 262 GERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFR 321
Query: 324 DAEGQDVLLFIDNIFRFTQVS 344
DAEGQDVLLFIDNIFRFTQ +
Sbjct: 322 DAEGQDVLLFIDNIFRFTQAN 342
>sp|P38482|ATPBM_CHLRE ATP synthase subunit beta, mitochondrial OS=Chlamydomonas
reinhardtii GN=ATP2 PE=1 SV=1
Length = 574
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/257 (82%), Positives = 229/257 (89%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G V QVIG VVDVRFD LP IL+ALEV H+VRLVLEVAQHMG+ VR +AMD T+GLV
Sbjct: 38 GFVSQVIGPVVDVRFDGELPSILSALEVQGHNVRLVLEVAQHMGDNTVRCVAMDSTDGLV 97
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ+V+NTGSPI VPVGR TLGRIMNVIGEP+DE+G ++ IHREAP F EQ+TEQ
Sbjct: 98 RGQKVVNTGSPIKVPVGRGTLGRIMNVIGEPVDEQGPIECSEVWSIHREAPEFTEQSTEQ 157
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT
Sbjct: 158 EILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 217
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLYREMIESGVIKLGDK+ +SKC LVYGQMNEPPGARARV LTGLTVAE+FRD EG
Sbjct: 218 REGNDLYREMIESGVIKLGDKRGESKCTLVYGQMNEPPGARARVALTGLTVAEYFRDVEG 277
Query: 328 QDVLLFIDNIFRFTQVS 344
QDVLLF+DNIFRFTQ +
Sbjct: 278 QDVLLFVDNIFRFTQAN 294
>sp|P10719|ATPB_RAT ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus
GN=Atp5b PE=1 SV=2
Length = 529
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/305 (71%), Positives = 239/305 (78%), Gaps = 16/305 (5%)
Query: 38 ASPYGHLLSRVSEYATSAAATAPPAQTPKSDVKKGGGGKITDEFTGKGAIGQVCQVIGAV 97
A P HLL R TAP P D + + A GQ+ VIGAV
Sbjct: 25 ALPQAHLLLR----------TAPAGVHPARDY----AAQSSAAPKAGTATGQIVAVIGAV 70
Query: 98 VDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGS 157
VDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLVRGQ+VL++G+
Sbjct: 71 VDVQFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGA 130
Query: 158 PITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVV 217
PI +PVG TLGRIMNVIGEPIDE+G +KT+ + PIH EAP F+E + EQ+ILVTGIKVV
Sbjct: 131 PIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVV 190
Query: 218 DLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREM 277
DLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERTREGNDLY EM
Sbjct: 191 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEM 250
Query: 278 IESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNI 337
IESGVI L K A SK ALVYGQMNEPPGARARV LTGLTVAE+FRD EGQDVLLFIDNI
Sbjct: 251 IESGVINL--KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 308
Query: 338 FRFTQ 342
FRFTQ
Sbjct: 309 FRFTQ 313
>sp|P06576|ATPB_HUMAN ATP synthase subunit beta, mitochondrial OS=Homo sapiens GN=ATP5B
PE=1 SV=3
Length = 529
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/258 (80%), Positives = 226/258 (87%), Gaps = 2/258 (0%)
Query: 85 GAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTE 144
A G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTE
Sbjct: 58 AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117
Query: 145 GLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQA 204
GLVRGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G +KT+ + PIH EAP F+E +
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMS 177
Query: 205 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 264
EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVG
Sbjct: 178 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 237
Query: 265 ERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 324
ERTREGNDLY EMIESGVI L D A SK ALVYGQMNEPPGARARV LTGLTVAE+FRD
Sbjct: 238 ERTREGNDLYHEMIESGVINLKD--ATSKVALVYGQMNEPPGARARVALTGLTVAEYFRD 295
Query: 325 AEGQDVLLFIDNIFRFTQ 342
EGQDVLLFIDNIFRFTQ
Sbjct: 296 QEGQDVLLFIDNIFRFTQ 313
>sp|P56480|ATPB_MOUSE ATP synthase subunit beta, mitochondrial OS=Mus musculus GN=Atp5b
PE=1 SV=2
Length = 529
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/257 (80%), Positives = 226/257 (87%), Gaps = 2/257 (0%)
Query: 86 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEG 145
A G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEG
Sbjct: 59 ATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTEG 118
Query: 146 LVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQAT 205
LVRGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G +KT+ + PIH EAP F+E +
Sbjct: 119 LVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSV 178
Query: 206 EQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGE 265
EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGE
Sbjct: 179 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 238
Query: 266 RTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA 325
RTREGNDLY EMIESGVI L K A SK ALVYGQMNEPPGARARV LTGLTVAE+FRD
Sbjct: 239 RTREGNDLYHEMIESGVINL--KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296
Query: 326 EGQDVLLFIDNIFRFTQ 342
EGQDVLLFIDNIFRFTQ
Sbjct: 297 EGQDVLLFIDNIFRFTQ 313
>sp|P00829|ATPB_BOVIN ATP synthase subunit beta, mitochondrial OS=Bos taurus GN=ATP5B
PE=1 SV=2
Length = 528
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/255 (80%), Positives = 224/255 (87%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLV
Sbjct: 61 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLV 120
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G +KT+ + IH EAP FVE + EQ
Sbjct: 121 RGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQ 180
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERT
Sbjct: 181 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 240
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMIESGVI L K A SK ALVYGQMNEPPGARARV LTGLTVAE+FRD EG
Sbjct: 241 REGNDLYHEMIESGVINL--KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 298
Query: 328 QDVLLFIDNIFRFTQ 342
QDVLLFIDNIFRFTQ
Sbjct: 299 QDVLLFIDNIFRFTQ 313
>sp|Q5ZLC5|ATPB_CHICK ATP synthase subunit beta, mitochondrial OS=Gallus gallus GN=ATP5B
PE=1 SV=1
Length = 533
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/255 (80%), Positives = 223/255 (87%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ VIGAVVDV+FDEGLPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLV
Sbjct: 66 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGENTVRTIAMDGTEGLV 125
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ+VL++G+PI +PVG TLGRIMNVIGEPIDE+G + T+ + IH EAP FVE + EQ
Sbjct: 126 RGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAAIHAEAPEFVEMSVEQ 185
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERT
Sbjct: 186 KILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 245
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMIESGVI L K A SK ALVYGQMNEPPGARARV LTGLTVAE+FRD EG
Sbjct: 246 REGNDLYHEMIESGVINL--KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 303
Query: 328 QDVLLFIDNIFRFTQ 342
QDVLLFIDNIFRFTQ
Sbjct: 304 QDVLLFIDNIFRFTQ 318
>sp|Q9PTY0|ATPB_CYPCA ATP synthase subunit beta, mitochondrial OS=Cyprinus carpio
GN=atp5b PE=2 SV=1
Length = 518
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/255 (79%), Positives = 220/255 (86%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ VIGAVVDV+FDE LPPIL ALEV RLVLEVAQH+GE VRTIAMDGTEGLV
Sbjct: 51 GRIVAVIGAVVDVQFDEDLPPILNALEVAGRDTRLVLEVAQHLGENTVRTIAMDGTEGLV 110
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ+VL+TG+PI +PVG TLGRIMNVIGEPIDE+G + T+ PIH EAP F + + EQ
Sbjct: 111 RGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQTAPIHAEAPEFTDMSVEQ 170
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERT
Sbjct: 171 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 230
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMIESGVI L K SK ALVYGQMNEPPGARARV LTGLTVAE+FRD EG
Sbjct: 231 REGNDLYHEMIESGVINL--KDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 288
Query: 328 QDVLLFIDNIFRFTQ 342
QDVLLFIDNIFRFTQ
Sbjct: 289 QDVLLFIDNIFRFTQ 303
>sp|Q05825|ATPB_DROME ATP synthase subunit beta, mitochondrial OS=Drosophila melanogaster
GN=ATPsyn-beta PE=2 SV=3
Length = 505
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/255 (79%), Positives = 221/255 (86%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ VIGAVVDV+FD+ LPPIL ALEV + S RLVLEVAQH+GE VRTIAMDGTEGLV
Sbjct: 38 GKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 97
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ+VL+TG PI +PVG TLGRI+NVIGEPIDE+G + T+ IH EAP FV+ + EQ
Sbjct: 98 RGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQ 157
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERT
Sbjct: 158 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 217
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMIE GVI L DK SK ALVYGQMNEPPGARARV LTGLTVAE+FRD EG
Sbjct: 218 REGNDLYNEMIEGGVISLKDKT--SKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 275
Query: 328 QDVLLFIDNIFRFTQ 342
QDVLLFIDNIFRFTQ
Sbjct: 276 QDVLLFIDNIFRFTQ 290
>sp|P46561|ATPB_CAEEL ATP synthase subunit beta, mitochondrial OS=Caenorhabditis elegans
GN=atp-2 PE=1 SV=2
Length = 538
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/267 (75%), Positives = 226/267 (84%), Gaps = 2/267 (0%)
Query: 76 KITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVV 135
K++ + T A G++ VIGAVVDV+FDE LPPIL LEVV S RL+LEV+QH+G+ VV
Sbjct: 58 KVSAKATAANASGRIVAVIGAVVDVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVV 117
Query: 136 RTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHR 195
R IAMDGTEGLVRGQ V +TG PI +PVG TLGRIMNVIGEPIDE+G + ++++ IH
Sbjct: 118 RCIAMDGTEGLVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHA 177
Query: 196 EAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHG 255
EAP FVE + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHG
Sbjct: 178 EAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 237
Query: 256 GFSVFAGVGERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTG 315
G+SVFAGVGERTREGNDLY EMIE GVI L K +SK +LVYGQMNEPPGARARV LTG
Sbjct: 238 GYSVFAGVGERTREGNDLYHEMIEGGVIDL--KGKNSKVSLVYGQMNEPPGARARVCLTG 295
Query: 316 LTVAEHFRDAEGQDVLLFIDNIFRFTQ 342
LTVAE+FRD EGQDVLLFIDNIFRFTQ
Sbjct: 296 LTVAEYFRDQEGQDVLLFIDNIFRFTQ 322
>sp|Q25117|ATPB_HEMPU ATP synthase subunit beta, mitochondrial OS=Hemicentrotus
pulcherrimus PE=2 SV=1
Length = 523
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/255 (77%), Positives = 219/255 (85%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
GQ+ VIGAVVDV+F++ LPPIL ALEV + RLVLEVAQH+GE VRTIAMDGTEGL+
Sbjct: 56 GQIVAVIGAVVDVQFEDDLPPILNALEVQGRTSRLVLEVAQHLGENTVRTIAMDGTEGLI 115
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ+ ++TGSPI++PVG TLGRI+NVIGEPIDE+G + T+ IH EAP FVE + Q
Sbjct: 116 RGQKCVDTGSPISIPVGPETLGRIINVIGEPIDERGPIGTDRRSAIHAEAPEFVEMSVNQ 175
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERT
Sbjct: 176 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 235
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMIE GVI L D SK ALVYGQMNEPPGARARV LTGLTVAE+FRD EG
Sbjct: 236 REGNDLYHEMIEGGVISLKDDT--SKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 293
Query: 328 QDVLLFIDNIFRFTQ 342
QDVLLFIDNIFRFTQ
Sbjct: 294 QDVLLFIDNIFRFTQ 308
>sp|Q92LK8|ATPB_RHIME ATP synthase subunit beta OS=Rhizobium meliloti (strain 1021)
GN=atpD PE=3 SV=1
Length = 504
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/259 (78%), Positives = 222/259 (85%), Gaps = 3/259 (1%)
Query: 85 GAIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGT 143
GA+G+V QVIGAVVDV F+EG LP IL ALE ++ RLVLEVAQH+GE VRTIAMD T
Sbjct: 33 GAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNNGNRLVLEVAQHLGENSVRTIAMDST 92
Query: 144 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQ 203
EGLVRGQ+V +TG PI VPVG+ TLGRIMNVIGEP+DE G LKT IH+EAPA+V+Q
Sbjct: 93 EGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQEAPAYVDQ 152
Query: 204 ATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 263
+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGV
Sbjct: 153 STEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 212
Query: 264 GERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFR 323
GERTREGNDLY EMIESGV K G + SK ALVYGQMNEPPGARARV LTGLTVAE FR
Sbjct: 213 GERTREGNDLYHEMIESGVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTVAEQFR 271
Query: 324 DAEGQDVLLFIDNIFRFTQ 342
D EGQDVL F+DNIFRFTQ
Sbjct: 272 D-EGQDVLFFVDNIFRFTQ 289
>sp|Q3J431|ATPB1_RHOS4 ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpD1 PE=3 SV=1
Length = 475
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/255 (76%), Positives = 215/255 (84%), Gaps = 1/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G+V QVIGAVVDV+FD GLPPIL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 7 GKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGLV 66
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RG RV +TGSPI+VPVG TLGRI+NVIGEPIDEKGDL IH+ AP F EQ+T
Sbjct: 67 RGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTS 126
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H G+SVFAGVGERT
Sbjct: 127 EILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERT 186
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMIESGVIK+ D ++SK ALVYGQMNEPPGARARV LTGLT+AE FRD G
Sbjct: 187 REGNDLYHEMIESGVIKI-DNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 245
Query: 328 QDVLLFIDNIFRFTQ 342
DVL F+DNIFRFTQ
Sbjct: 246 TDVLFFVDNIFRFTQ 260
>sp|A3PIB9|ATPB1_RHOS1 ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=atpD1 PE=3 SV=1
Length = 475
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/255 (76%), Positives = 215/255 (84%), Gaps = 1/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G+V QVIGAVVDV+FD GLPPIL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 7 GKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGLV 66
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RG RV +TGSPI+VPVG TLGRI+NVIGEPIDEKGDL IH+ AP F EQ+T
Sbjct: 67 RGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTTS 126
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H G+SVFAGVGERT
Sbjct: 127 EILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERT 186
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMIESGVIK+ D ++SK ALVYGQMNEPPGARARV LTGLT+AE FRD G
Sbjct: 187 REGNDLYHEMIESGVIKI-DNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 245
Query: 328 QDVLLFIDNIFRFTQ 342
DVL F+DNIFRFTQ
Sbjct: 246 TDVLFFVDNIFRFTQ 260
>sp|A6UDM1|ATPB_SINMW ATP synthase subunit beta OS=Sinorhizobium medicae (strain WSM419)
GN=atpD PE=3 SV=1
Length = 509
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/259 (78%), Positives = 223/259 (86%), Gaps = 3/259 (1%)
Query: 85 GAIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGT 143
GA+G+V QVIGAVVDV F+EG LP IL ALE ++ RLVLEVAQH+GE VRTIAMD T
Sbjct: 38 GAVGRVTQVIGAVVDVAFEEGQLPKILNALETDNNGNRLVLEVAQHLGENSVRTIAMDST 97
Query: 144 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQ 203
EGLVRGQ+V +TG+PI VPVG+ TLGRIMNVIGEP+DE G LKT IH++APA+V+Q
Sbjct: 98 EGLVRGQKVTDTGAPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQDAPAYVDQ 157
Query: 204 ATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 263
+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGV
Sbjct: 158 STEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 217
Query: 264 GERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFR 323
GERTREGNDLY EMIESGV K G + SK ALVYGQMNEPPGARARV LTGLTVAE FR
Sbjct: 218 GERTREGNDLYHEMIESGVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTVAEQFR 276
Query: 324 DAEGQDVLLFIDNIFRFTQ 342
D EGQDVL F+DNIFRFTQ
Sbjct: 277 D-EGQDVLFFVDNIFRFTQ 294
>sp|C3M9S1|ATPB_RHISN ATP synthase subunit beta OS=Rhizobium sp. (strain NGR234) GN=atpD
PE=3 SV=1
Length = 505
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/259 (77%), Positives = 222/259 (85%), Gaps = 3/259 (1%)
Query: 85 GAIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGT 143
GA+G+V QVIGAVVDV F+EG LP IL ALE + RLVLEVAQH+GE VRTIAMD T
Sbjct: 34 GAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNKGNRLVLEVAQHLGENAVRTIAMDST 93
Query: 144 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQ 203
EGLVRGQ V +TG PI+VPVG+ TLGRIMNVIGEP+DE G ++T IH++APA+VEQ
Sbjct: 94 EGLVRGQSVTDTGGPISVPVGKETLGRIMNVIGEPVDEAGPVETSSRRAIHQDAPAYVEQ 153
Query: 204 ATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 263
+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGV
Sbjct: 154 STEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 213
Query: 264 GERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFR 323
GERTREGNDLY EMIESGV K G + SK ALVYGQMNEPPGARARV LTGLT+AEHFR
Sbjct: 214 GERTREGNDLYHEMIESGVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTIAEHFR 272
Query: 324 DAEGQDVLLFIDNIFRFTQ 342
D EGQDVL F+DNIFRFTQ
Sbjct: 273 D-EGQDVLFFVDNIFRFTQ 290
>sp|B3PQ68|ATPB_RHIE6 ATP synthase subunit beta OS=Rhizobium etli (strain CIAT 652)
GN=atpD PE=3 SV=1
Length = 475
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/257 (77%), Positives = 222/257 (86%), Gaps = 2/257 (0%)
Query: 86 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEG 145
++G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD +EG
Sbjct: 8 SVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEG 67
Query: 146 LVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQAT 205
LVRGQ+V++TG+PI+VPVG TLGRIMNVIGEP+DE G L T H IH++APA+VEQ+T
Sbjct: 68 LVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQST 127
Query: 206 EQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGE 265
E QILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGE
Sbjct: 128 EAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 187
Query: 266 RTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA 325
RTREGNDLY EMIESGV K G + SK ALVYGQMNEPPGARARV LTGLTVAEHFRD
Sbjct: 188 RTREGNDLYHEMIESGVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTVAEHFRD- 245
Query: 326 EGQDVLLFIDNIFRFTQ 342
+GQDVL F+DNIFRFTQ
Sbjct: 246 QGQDVLFFVDNIFRFTQ 262
>sp|Q2K3H0|ATPB_RHIEC ATP synthase subunit beta OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=atpD PE=3 SV=1
Length = 475
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/257 (77%), Positives = 222/257 (86%), Gaps = 2/257 (0%)
Query: 86 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEG 145
++G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VRTIAMD +EG
Sbjct: 8 SVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEG 67
Query: 146 LVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQAT 205
LVRGQ+V++TG+PI+VPVG TLGRIMNVIGEP+DE G L T H IH++APA+VEQ+T
Sbjct: 68 LVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQST 127
Query: 206 EQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGE 265
E QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGE
Sbjct: 128 EAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 187
Query: 266 RTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA 325
RTREGNDLY EMIESGV K G + SK ALVYGQMNEPPGARARV LTGLTVAEHFRD
Sbjct: 188 RTREGNDLYHEMIESGVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTVAEHFRD- 245
Query: 326 EGQDVLLFIDNIFRFTQ 342
+GQDVL F+DNIFRFTQ
Sbjct: 246 QGQDVLFFVDNIFRFTQ 262
>sp|Q1MAZ2|ATPB_RHIL3 ATP synthase subunit beta OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=atpD PE=3 SV=1
Length = 478
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/258 (77%), Positives = 220/258 (85%), Gaps = 2/258 (0%)
Query: 85 GAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTE 144
G++G+V QVIGAVVDV F+ LP IL ALE ++ RLVLEVAQH+GE VVRTIAMD +E
Sbjct: 10 GSVGRVTQVIGAVVDVAFEGELPKILNALETSNNGNRLVLEVAQHLGENVVRTIAMDSSE 69
Query: 145 GLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQA 204
GLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G L T H IH++AP++VEQ+
Sbjct: 70 GLVRGQEVADTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQDAPSYVEQS 129
Query: 205 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 264
TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVG
Sbjct: 130 TESQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 189
Query: 265 ERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 324
ERTREGNDLY EMIES V K G + SK ALVYGQMNEPPGARARV LTGLTVAEHFRD
Sbjct: 190 ERTREGNDLYHEMIESNVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTVAEHFRD 248
Query: 325 AEGQDVLLFIDNIFRFTQ 342
+GQDVL F+DNIFRFTQ
Sbjct: 249 -QGQDVLFFVDNIFRFTQ 265
>sp|B5ZSN7|ATPB_RHILW ATP synthase subunit beta OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=atpD PE=3 SV=1
Length = 478
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/258 (77%), Positives = 220/258 (85%), Gaps = 2/258 (0%)
Query: 85 GAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTE 144
G++G+V QVIGAVVDV F+ LP IL ALE ++ VRLVLEVAQH+GE VRTIAMD +E
Sbjct: 10 GSVGRVTQVIGAVVDVAFEGELPKILNALETTNNGVRLVLEVAQHLGENEVRTIAMDSSE 69
Query: 145 GLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQA 204
GLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G L T H IH++AP++VEQ+
Sbjct: 70 GLVRGQEVSDTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQDAPSYVEQS 129
Query: 205 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 264
TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVG
Sbjct: 130 TEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 189
Query: 265 ERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 324
ERTREGNDLY EMIES V K G + SK ALVYGQMNEPPGARARV LTGLTVAEHFRD
Sbjct: 190 ERTREGNDLYHEMIESNVNKHGGGEG-SKAALVYGQMNEPPGARARVALTGLTVAEHFRD 248
Query: 325 AEGQDVLLFIDNIFRFTQ 342
+GQDVL F+DNIFRFTQ
Sbjct: 249 -QGQDVLFFVDNIFRFTQ 265
>sp|Q8UC76|ATPB_AGRT5 ATP synthase subunit beta OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=atpD PE=3 SV=1
Length = 484
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/281 (72%), Positives = 224/281 (79%), Gaps = 15/281 (5%)
Query: 62 AQTPKSDVKKGGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVR 121
A TPK G GK+T QVIGAVVDV F+ LPPIL ALE ++ R
Sbjct: 4 AATPKKTAAVNGAGKVT-------------QVIGAVVDVAFEGELPPILNALETQNNGNR 50
Query: 122 LVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDE 181
LVLEVAQH+GE VVRTIAMD TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE
Sbjct: 51 LVLEVAQHLGENVVRTIAMDSTEGLVRGQSVADTGAPIEVPVGLETLGRIMNVIGEPVDE 110
Query: 182 KGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTV 241
G + T IH++AP++VEQ+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTV
Sbjct: 111 AGPIVTAKKRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 170
Query: 242 LIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQM 301
LIMELINNVAKAHGG+SVFAGVGERTREGNDLY EMIES V KLG + SK ALVYGQM
Sbjct: 171 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKLGGGEG-SKAALVYGQM 229
Query: 302 NEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQ 342
NEPPGARARV LTGLT+AE+FRD EGQDVL F+DNIFRFTQ
Sbjct: 230 NEPPGARARVALTGLTIAENFRD-EGQDVLFFVDNIFRFTQ 269
>sp|Q4FP38|ATPB_PELUB ATP synthase subunit beta OS=Pelagibacter ubique (strain HTCC1062)
GN=atpD PE=3 SV=1
Length = 472
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/255 (76%), Positives = 216/255 (84%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ Q+IGAVVDV+FD LP IL+ALE + RLVLEVAQH+GE VRTIAMD TEGL
Sbjct: 4 GKITQIIGAVVDVKFDGELPEILSALECKNGDNRLVLEVAQHLGESSVRTIAMDATEGLK 63
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RG V TG+PI VPVG TLGRI+NVIGEPIDEKG++KT+ PIHR AP F +Q+TE
Sbjct: 64 RGDEVTATGAPIQVPVGPETLGRIINVIGEPIDEKGEVKTKEKWPIHRAAPEFSDQSTET 123
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT
Sbjct: 124 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 183
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMI+SGVIK + SK ALVYGQMNEPPGARARV LTGLTVAE+FRD EG
Sbjct: 184 REGNDLYHEMIDSGVIK--PEGPGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 241
Query: 328 QDVLLFIDNIFRFTQ 342
QDVL F+DNIFRFTQ
Sbjct: 242 QDVLFFVDNIFRFTQ 256
>sp|P23704|ATPB_NEUCR ATP synthase subunit beta, mitochondrial OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=atp-2 PE=2 SV=1
Length = 519
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/256 (74%), Positives = 218/256 (85%), Gaps = 4/256 (1%)
Query: 88 GQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGL 146
G++ QVIGAVVDV+FD + LPPIL ALE ++ +LVLEV+QH+GE VVR IAMDGTEGL
Sbjct: 49 GKIYQVIGAVVDVKFDTDKLPPILNALETQNNGQKLVLEVSQHLGENVVRCIAMDGTEGL 108
Query: 147 VRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATE 206
VRG + +TG+PIT+PVG TLGRI+NV G+PIDE+G +KT+ + PIH EAP FVEQ+T
Sbjct: 109 VRGAKASDTGAPITIPVGPATLGRIINVTGDPIDERGPIKTDKFRPIHAEAPEFVEQSTT 168
Query: 207 QQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 266
+ILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTV I ELINN+AKAHGG+SVF GVGER
Sbjct: 169 AEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGER 228
Query: 267 TREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAE 326
TREGNDLY EM E+ VI+L DSK ALV+GQMNEPPGARARV LTGLT+AE+FRD E
Sbjct: 229 TREGNDLYHEMQETSVIQL---DGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEE 285
Query: 327 GQDVLLFIDNIFRFTQ 342
GQDVLLFIDNIFRFTQ
Sbjct: 286 GQDVLLFIDNIFRFTQ 301
>sp|P05038|ATPB_RHORU ATP synthase subunit beta OS=Rhodospirillum rubrum GN=atpD PE=1
SV=3
Length = 474
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/260 (74%), Positives = 217/260 (83%), Gaps = 4/260 (1%)
Query: 84 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGT 143
K +G + QV GAVVDV+F+ LP IL+ALE +H RLVLEVAQH+GE VVRTIAMD T
Sbjct: 3 KNNLGTITQVTGAVVDVKFEGELPSILSALETDNHGNRLVLEVAQHLGESVVRTIAMDST 62
Query: 144 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQ 203
EGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQ
Sbjct: 63 EGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQ 122
Query: 204 ATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 263
ATE +ILVTGIKV+DL+APY +GGK+GLFGGAGVGKTVLI ELINNVAK HGG+SVFAGV
Sbjct: 123 ATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELINNVAKGHGGYSVFAGV 182
Query: 264 GERTREGNDLYREMIESGVIKL-GDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHF 322
GERTREGNDLY EMI++G+I L GDK SK ALVYGQMNEPPGARARV L GLT AE+F
Sbjct: 183 GERTREGNDLYHEMIDAGIIDLEGDK---SKVALVYGQMNEPPGARARVALAGLTQAEYF 239
Query: 323 RDAEGQDVLLFIDNIFRFTQ 342
RD EGQDVL F+DNIFRFTQ
Sbjct: 240 RDEEGQDVLFFVDNIFRFTQ 259
>sp|Q2RV18|ATPB_RHORT ATP synthase subunit beta OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=atpD PE=3 SV=1
Length = 474
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/260 (74%), Positives = 217/260 (83%), Gaps = 4/260 (1%)
Query: 84 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGT 143
K +G + QV GAVVDV+F+ LP IL+ALE +H RLVLEVAQH+GE VVRTIAMD T
Sbjct: 3 KNNLGTITQVTGAVVDVKFEGELPSILSALETDNHGNRLVLEVAQHLGESVVRTIAMDST 62
Query: 144 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQ 203
EGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQ
Sbjct: 63 EGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQ 122
Query: 204 ATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 263
ATE +ILVTGIKV+DL+APY +GGK+GLFGGAGVGKTVLI ELINNVAK HGG+SVFAGV
Sbjct: 123 ATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELINNVAKGHGGYSVFAGV 182
Query: 264 GERTREGNDLYREMIESGVIKL-GDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHF 322
GERTREGNDLY EMI++G+I L GDK SK ALVYGQMNEPPGARARV L GLT AE+F
Sbjct: 183 GERTREGNDLYHEMIDAGIIDLEGDK---SKVALVYGQMNEPPGARARVALAGLTQAEYF 239
Query: 323 RDAEGQDVLLFIDNIFRFTQ 342
RD EGQDVL F+DNIFRFTQ
Sbjct: 240 RDEEGQDVLFFVDNIFRFTQ 259
>sp|P72247|ATPB_RHOCA ATP synthase subunit beta OS=Rhodobacter capsulatus GN=atpD PE=1
SV=3
Length = 472
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/255 (74%), Positives = 212/255 (83%), Gaps = 1/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G+V QVIGAVVDV+F++GLP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 5 GKVTQVIGAVVDVQFEDGLPAILNALETTNNGKRLVLEVAQHLGENTVRTIAMDATEGLV 64
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RG V +TG PITVPVG TLGRI+NVIGEP+DE+GD+ IH+ AP F Q+TE
Sbjct: 65 RGAAVSDTGGPITVPVGNATLGRILNVIGEPVDERGDVSKAEARAIHQPAPDFAAQSTES 124
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
QILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H GFSVFAGVGERT
Sbjct: 125 QILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGERT 184
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMIESGVI L +K +SK ALVYGQMNEPPGARARV LTGLT+AE FRD G
Sbjct: 185 REGNDLYHEMIESGVINL-EKLEESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 243
Query: 328 QDVLLFIDNIFRFTQ 342
DVL F+DNIFRFTQ
Sbjct: 244 TDVLFFVDNIFRFTQ 258
>sp|Q6NDD2|ATPB_RHOPA ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=atpD PE=3 SV=1
Length = 476
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/255 (76%), Positives = 219/255 (85%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLV 68
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ V +TG+PI+VPVG TLGRIMNVIGEP+DE+G +K+E IH+EAPA+ +Q+TE
Sbjct: 69 RGQEVTDTGAPISVPVGAGTLGRIMNVIGEPVDEQGPIKSEGLRAIHQEAPAYTDQSTEA 128
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVA+AHGG+SVFAGVGERT
Sbjct: 129 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAGVGERT 188
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY E IESGV K G + SKCALVYGQMNEPPGARARVGLTGLTVAEHFRD +G
Sbjct: 189 REGNDLYHEFIESGVNKKGGGEG-SKCALVYGQMNEPPGARARVGLTGLTVAEHFRD-QG 246
Query: 328 QDVLLFIDNIFRFTQ 342
QDVL F+DNIFRFTQ
Sbjct: 247 QDVLFFVDNIFRFTQ 261
>sp|B6JD09|ATPB_OLICO ATP synthase subunit beta OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=atpD PE=3 SV=1
Length = 476
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/256 (75%), Positives = 216/256 (84%), Gaps = 2/256 (0%)
Query: 87 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGL 146
+G++ QVIGAVVDV+FD LP IL A+E + RLVLEVAQH+GE VR IAMD TEGL
Sbjct: 8 VGRITQVIGAVVDVQFDGYLPAILNAIETTNQGHRLVLEVAQHLGESTVRAIAMDTTEGL 67
Query: 147 VRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATE 206
VRGQ V +TG+PI VPVG TLGRIMNV+GEP+DE G +K + IH+EAPA+ EQ+TE
Sbjct: 68 VRGQEVTDTGAPIKVPVGEGTLGRIMNVVGEPVDEGGPVKADGTRAIHQEAPAYTEQSTE 127
Query: 207 QQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 266
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAHGG+SVFAGVGER
Sbjct: 128 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGER 187
Query: 267 TREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAE 326
TREGNDLY E IESGV K G + SKCALVYGQMNEPPGARARVGLTGLTVAEHFRD +
Sbjct: 188 TREGNDLYHEFIESGVNKKGGGEG-SKCALVYGQMNEPPGARARVGLTGLTVAEHFRD-Q 245
Query: 327 GQDVLLFIDNIFRFTQ 342
GQDVL F+DNIFRFTQ
Sbjct: 246 GQDVLFFVDNIFRFTQ 261
>sp|A6WXX1|ATPB_OCHA4 ATP synthase subunit beta OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=atpD PE=3 SV=1
Length = 517
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/259 (76%), Positives = 221/259 (85%), Gaps = 3/259 (1%)
Query: 85 GAIGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGT 143
GA+G++ QVIGAVVDV+F++G LP IL ALE + RLVLEVAQH+GE VRTIAMD T
Sbjct: 46 GAVGKITQVIGAVVDVQFEDGQLPLILNALETDNLGSRLVLEVAQHLGENTVRTIAMDST 105
Query: 144 EGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQ 203
EGLVRG V +TG+PI VPVG TLGRIMNVIGEP+DE G +KT IH+EAP ++EQ
Sbjct: 106 EGLVRGHEVRDTGNPIMVPVGEETLGRIMNVIGEPVDEAGPIKTTARRAIHQEAPEYIEQ 165
Query: 204 ATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGV 263
+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGV
Sbjct: 166 STEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 225
Query: 264 GERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFR 323
GERTREGNDLY EMIESGV KLG + SK ALVYGQMNEPPGARARV L+GLTVAE+FR
Sbjct: 226 GERTREGNDLYHEMIESGVNKLGGGEG-SKAALVYGQMNEPPGARARVALSGLTVAENFR 284
Query: 324 DAEGQDVLLFIDNIFRFTQ 342
D +GQDVL F+DNIFRFTQ
Sbjct: 285 D-KGQDVLFFVDNIFRFTQ 302
>sp|A1UR49|ATPB_BARBK ATP synthase subunit beta OS=Bartonella bacilliformis (strain ATCC
35685 / KC583) GN=atpD PE=3 SV=1
Length = 537
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/295 (66%), Positives = 231/295 (78%), Gaps = 16/295 (5%)
Query: 53 TSAAATAPPAQTPKSDVKKGGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTA 112
TS + P++T S +KGG KGA+G++ QVIGA+VDV+F+ LP IL A
Sbjct: 38 TSQSVKNSPSRTGSSSPQKGGK---------KGAVGEIKQVIGAIVDVQFEGALPNILNA 88
Query: 113 LEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIM 172
LE RL+LEVAQH+GE VRTIAMD T+GLVRGQ+V +TG+ I VPVG TLGRIM
Sbjct: 89 LETDRLGSRLILEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQICVPVGEATLGRIM 148
Query: 173 NVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLF 232
NVIGEP+DE G + T IH++AP ++EQ+TE +ILVTGIKVVDLLAPY +GGK+GLF
Sbjct: 149 NVIGEPVDEVGPIVTTKTRSIHQKAPEYIEQSTESEILVTGIKVVDLLAPYSKGGKVGLF 208
Query: 233 GGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQAD- 291
GGAGVGKTVLIMELINN+AKAHGG+SVFAGVGERTREGNDLY EMIES V + K+ D
Sbjct: 209 GGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREGNDLYYEMIESRV-NVNPKENDG 267
Query: 292 ----SKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQ 342
SKCALVYGQMNEPPGARARV L+GLT+AE+FRD EGQDVL F+DNIFRFTQ
Sbjct: 268 STKGSKCALVYGQMNEPPGARARVALSGLTIAENFRD-EGQDVLFFVDNIFRFTQ 321
>sp|Q0C100|ATPB_HYPNA ATP synthase subunit beta OS=Hyphomonas neptunium (strain ATCC
15444) GN=atpD PE=3 SV=1
Length = 475
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/255 (73%), Positives = 215/255 (84%), Gaps = 3/255 (1%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ QVIGAVVDV FD LP IL ALE ++ RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 9 GRISQVIGAVVDVEFDGELPSILNALETFNNGSRLVLEVAQHLGENTVRTIAMDSTEGLV 68
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ V + G+PITVPVG TLGRIMNVIGEPIDE+G + + Y+PIH +APAFV+QATE
Sbjct: 69 RGQPVSDIGTPITVPVGPATLGRIMNVIGEPIDERGPVNADTYMPIHAQAPAFVDQATES 128
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
++LVTGIKV+DLL PY +GGKIGLFGGAGVGKTVLIMEL+NN+AK GG+SVFAGVGERT
Sbjct: 129 EVLVTGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLIMELVNNIAKLFGGYSVFAGVGERT 188
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMIES VI L + +S+ +LVYGQMNEPPGARARV LTGLT AE+FRD EG
Sbjct: 189 REGNDLYHEMIESNVINL---EGESRMSLVYGQMNEPPGARARVALTGLTQAEYFRDVEG 245
Query: 328 QDVLLFIDNIFRFTQ 342
+DVL F+DNIFRFTQ
Sbjct: 246 KDVLFFVDNIFRFTQ 260
>sp|Q3SVJ1|ATPB_NITWN ATP synthase subunit beta OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=atpD PE=3 SV=1
Length = 476
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/261 (73%), Positives = 218/261 (83%), Gaps = 2/261 (0%)
Query: 82 TGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMD 141
T +G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD
Sbjct: 3 TAANQVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIAMD 62
Query: 142 GTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFV 201
TEGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G +K + PIH EAP++
Sbjct: 63 TTEGLVRGQDVTDTGAPIRVPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPSYT 122
Query: 202 EQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFA 261
+Q+TE +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAHGG+SVFA
Sbjct: 123 DQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFA 182
Query: 262 GVGERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEH 321
GVGERTREGNDLY E IESGV K G + SKCALVYGQMNEPPGARARV L+GLTVAEH
Sbjct: 183 GVGERTREGNDLYHEFIESGVNKKGGGEG-SKCALVYGQMNEPPGARARVALSGLTVAEH 241
Query: 322 FRDAEGQDVLLFIDNIFRFTQ 342
FRD +GQDVL F+DNIFRFTQ
Sbjct: 242 FRD-QGQDVLFFVDNIFRFTQ 261
>sp|A7HT52|ATPB_PARL1 ATP synthase subunit beta OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=atpD PE=3 SV=1
Length = 478
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/261 (74%), Positives = 217/261 (83%), Gaps = 5/261 (1%)
Query: 86 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEG 145
A+G++ QVIGAVVDV F + LP IL ALE + RLVLEVAQH+GE VRTIAMD TEG
Sbjct: 4 AVGKIAQVIGAVVDVTFTDNLPAILNALETTNGGNRLVLEVAQHLGENTVRTIAMDTTEG 63
Query: 146 LVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQAT 205
L RGQ V +TG+ ITVPVG TLGRI+NVIGEP+DE G +K E IH+EAP+FVEQ+T
Sbjct: 64 LTRGQEVRDTGNAITVPVGEGTLGRIINVIGEPVDEAGPVKHEARREIHQEAPSFVEQST 123
Query: 206 EQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGE 265
E Q+LVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLI ELINN+AKAHGG+SVFAGVGE
Sbjct: 124 EAQMLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGE 183
Query: 266 RTREGNDLYREMIESGVIKLGDKQ----ADSKCALVYGQMNEPPGARARVGLTGLTVAEH 321
RTREGNDLY EMIESGV K ++ SKCALV+GQMNEPPGARARV LTGLTVAEH
Sbjct: 184 RTREGNDLYHEMIESGVNKDPNENNGDTTGSKCALVFGQMNEPPGARARVALTGLTVAEH 243
Query: 322 FRDAEGQDVLLFIDNIFRFTQ 342
FRD +GQDVL F+DNIFRFTQ
Sbjct: 244 FRD-KGQDVLFFVDNIFRFTQ 263
>sp|A4WUM7|ATPB_RHOS5 ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=atpD PE=3 SV=1
Length = 475
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/255 (74%), Positives = 212/255 (83%), Gaps = 1/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G+V QVIGAVVDV+FD GLP IL ALE V++ RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 7 GKVTQVIGAVVDVQFDGGLPAILNALETVNNDKRLVLEVAQHLGENTVRTIAMDATEGLV 66
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RG V + G PI+VPVG TLGRI+NVIGEPIDEKG + + IH+ AP F EQ+T
Sbjct: 67 RGAPVTDLGGPISVPVGDATLGRILNVIGEPIDEKGPVSGDSTRAIHQPAPTFAEQSTTS 126
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H G+SVFAGVGERT
Sbjct: 127 EILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERT 186
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY EMI+SGVIK+ D ++SK ALVYGQMNEPPGARARV LTGLT+AE FRD G
Sbjct: 187 REGNDLYHEMIDSGVIKI-DNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 245
Query: 328 QDVLLFIDNIFRFTQ 342
DVL F+DNIFRFTQ
Sbjct: 246 TDVLFFVDNIFRFTQ 260
>sp|P22068|ATPB_SCHPO ATP synthase subunit beta, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=atp2 PE=1 SV=1
Length = 525
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/258 (74%), Positives = 218/258 (84%), Gaps = 6/258 (2%)
Query: 88 GQVCQVIGAVVDVRFDEG--LPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTE 144
G + QVIGAVVD +F++ LP IL ALEV + + RLVLEVAQH+GE VRTIAMDGTE
Sbjct: 55 GSIKQVIGAVVDCQFEDADSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTE 114
Query: 145 GLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQA 204
GLVRG V++TGSPI++PVG TLGRIMNVIGEP+DE+G +K Y PIH +AP+F EQ+
Sbjct: 115 GLVRGTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAPSFEEQS 174
Query: 205 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 264
T +IL TGIKVVDLLAPY RGGKIGLFGGAGVGKTV I ELINN+AKAHGG+SVF GVG
Sbjct: 175 TTPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVG 234
Query: 265 ERTREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 324
ERTREGNDLYREM E+GVIKL + +SK ALV+GQMNEPPGARARV LTGLTVAE+FRD
Sbjct: 235 ERTREGNDLYREMQETGVIKL---EGESKAALVFGQMNEPPGARARVALTGLTVAEYFRD 291
Query: 325 AEGQDVLLFIDNIFRFTQ 342
EGQDVLLFIDNIFRFTQ
Sbjct: 292 IEGQDVLLFIDNIFRFTQ 309
>sp|P00830|ATPB_YEAST ATP synthase subunit beta, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ATP2 PE=1
SV=2
Length = 511
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/256 (74%), Positives = 217/256 (84%), Gaps = 4/256 (1%)
Query: 88 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGL 146
G+V VIGA+VDV F++ LP IL ALE+ +LVLEVAQH+GE VRTIAMDGTEGL
Sbjct: 44 GKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGL 103
Query: 147 VRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATE 206
VRG++VL+TG PI+VPVGR TLGRI+NVIGEPIDE+G +K++ PIH + P+F EQ+T
Sbjct: 104 VRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTS 163
Query: 207 QQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 266
+IL TGIKVVDLLAPY RGGKIGLFGGAGVGKTV I ELINN+AKAHGGFSVF GVGER
Sbjct: 164 AEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGER 223
Query: 267 TREGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAE 326
TREGNDLYREM E+GVI L + +SK ALV+GQMNEPPGARARV LTGLT+AE+FRD E
Sbjct: 224 TREGNDLYREMKETGVINL---EGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEE 280
Query: 327 GQDVLLFIDNIFRFTQ 342
GQDVLLFIDNIFRFTQ
Sbjct: 281 GQDVLLFIDNIFRFTQ 296
>sp|A7IH31|ATPB_XANP2 ATP synthase subunit beta OS=Xanthobacter autotrophicus (strain
ATCC BAA-1158 / Py2) GN=atpD PE=3 SV=1
Length = 478
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/260 (74%), Positives = 214/260 (82%), Gaps = 5/260 (1%)
Query: 87 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGL 146
+G++ QVIGAVVDV+FD LP IL ALE + RLVLEVAQH+GE VR IAMD TEGL
Sbjct: 5 VGRITQVIGAVVDVQFDGHLPEILNALETTNQGNRLVLEVAQHLGESTVRCIAMDATEGL 64
Query: 147 VRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATE 206
VRG V +TG+PI VPVG TLGRIMNVIGEP+DE G ++ E IH+ AP++ EQATE
Sbjct: 65 VRGLEVTDTGAPIQVPVGAGTLGRIMNVIGEPVDELGPIEAEATRGIHQPAPSYAEQATE 124
Query: 207 QQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 266
+ILVTGIKVVDLLAPY +GGK+GLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGER
Sbjct: 125 AEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 184
Query: 267 TREGNDLYREMIESGVIK----LGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHF 322
TREGNDLY EMIES V K G A SKCALVYGQMNEPPGARARV LTGLTVAEHF
Sbjct: 185 TREGNDLYHEMIESNVNKDPHENGGSAAGSKCALVYGQMNEPPGARARVALTGLTVAEHF 244
Query: 323 RDAEGQDVLLFIDNIFRFTQ 342
RD +GQDVL F+DNIFRFTQ
Sbjct: 245 RD-QGQDVLFFVDNIFRFTQ 263
>sp|Q07UZ5|ATPB_RHOP5 ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain
BisA53) GN=atpD PE=3 SV=1
Length = 476
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/255 (75%), Positives = 215/255 (84%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ QVIGAVVDV+F+ LP IL A+E + + RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLV 68
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ V +TGSPI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE
Sbjct: 69 RGQEVTDTGSPIMVPVGLGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPLYTDQSTEA 128
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAHGG+SVFAGVGERT
Sbjct: 129 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERT 188
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY E IESGV K G + SKCALVYGQMNEPPGARARV L+GLTVAEHFRD +G
Sbjct: 189 REGNDLYHEFIESGVNKKGGGEG-SKCALVYGQMNEPPGARARVALSGLTVAEHFRD-QG 246
Query: 328 QDVLLFIDNIFRFTQ 342
QDVL F+DNIFRFTQ
Sbjct: 247 QDVLFFVDNIFRFTQ 261
>sp|Q13DP2|ATPB_RHOPS ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain
BisB5) GN=atpD PE=3 SV=1
Length = 476
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/255 (75%), Positives = 214/255 (83%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLV 68
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ V +TGSPI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE
Sbjct: 69 RGQEVTDTGSPIMVPVGIGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPLYTDQSTEA 128
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAHGG+SVFAGVGERT
Sbjct: 129 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERT 188
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY E IESGV K G + SKCALVYGQMNEPPGARARV L+GLTVAEHFRD +G
Sbjct: 189 REGNDLYHEFIESGVNKKGGGEG-SKCALVYGQMNEPPGARARVALSGLTVAEHFRD-QG 246
Query: 328 QDVLLFIDNIFRFTQ 342
QDVL F+DNIFRFTQ
Sbjct: 247 QDVLFFVDNIFRFTQ 261
>sp|Q2J3I4|ATPB_RHOP2 ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain
HaA2) GN=atpD PE=3 SV=1
Length = 476
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/255 (75%), Positives = 214/255 (83%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLV 68
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE
Sbjct: 69 RGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEA 128
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAHGG+SVFAGVGERT
Sbjct: 129 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERT 188
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY E IESGV K G + SKCALVYGQMNEPPGARARV L+GLTVAEHFRD +G
Sbjct: 189 REGNDLYHEFIESGVNKKGGGEG-SKCALVYGQMNEPPGARARVALSGLTVAEHFRD-QG 246
Query: 328 QDVLLFIDNIFRFTQ 342
QDVL F+DNIFRFTQ
Sbjct: 247 QDVLFFVDNIFRFTQ 261
>sp|Q21CY7|ATPB_RHOPB ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain
BisB18) GN=atpD PE=3 SV=1
Length = 476
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/255 (75%), Positives = 215/255 (84%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ QVIGAVVDV+F+ LP IL A+E + + RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAVETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLV 68
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G + E PIH EAP + +Q+TE
Sbjct: 69 RGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEA 128
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAHGG+SVFAGVGERT
Sbjct: 129 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERT 188
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY E IESGV K G + SKCALVYGQMNEPPGARARV L+GLTVAEHFRD +G
Sbjct: 189 REGNDLYHEFIESGVNKKGGGEG-SKCALVYGQMNEPPGARARVALSGLTVAEHFRD-QG 246
Query: 328 QDVLLFIDNIFRFTQ 342
QDVL F+DNIFRFTQ
Sbjct: 247 QDVLFFVDNIFRFTQ 261
>sp|A9IYW6|ATPB_BART1 ATP synthase subunit beta OS=Bartonella tribocorum (strain CIP
105476 / IBS 506) GN=atpD PE=3 SV=1
Length = 541
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/302 (66%), Positives = 234/302 (77%), Gaps = 18/302 (5%)
Query: 46 SRVSEYATSAAATAPPAQTPKSDVKKGGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEG 105
S+V+ +SA A + TP VKK E KG +G++ QVIGAVVDV+F+
Sbjct: 38 SQVNVKISSAPARSAAKDTP---VKK--------EERAKGTVGEIKQVIGAVVDVQFEGA 86
Query: 106 LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGR 165
LP IL ALE + RLVLEVAQH+GE VRTIAMD T+GL+RGQ+V++TG+ I+VPVG
Sbjct: 87 LPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTDGLMRGQKVVDTGAQISVPVGE 146
Query: 166 VTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQR 225
TLGRIMNVIGEP+D G + + IH+EAP +VEQ+T +ILVTGIKVVDLLAPY +
Sbjct: 147 ATLGRIMNVIGEPVDNVGPIASTKTRSIHQEAPEYVEQSTVSEILVTGIKVVDLLAPYSK 206
Query: 226 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKL 285
GGKIGLFGGAGVGKTVLIMELINN+AKAHGG+SVFAGVGERTREGNDLY EMIESGV +
Sbjct: 207 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREGNDLYYEMIESGV-NV 265
Query: 286 GDKQAD-----SKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 340
K+ + SKCALVYGQMNEPPGARARV L+GLT+AE FRD EGQDVL F+DNIFRF
Sbjct: 266 NPKENNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRD-EGQDVLFFVDNIFRF 324
Query: 341 TQ 342
TQ
Sbjct: 325 TQ 326
>sp|Q1QQS8|ATPB_NITHX ATP synthase subunit beta OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=atpD PE=3 SV=1
Length = 476
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/255 (75%), Positives = 215/255 (84%), Gaps = 2/255 (0%)
Query: 88 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLV 147
G++ QVIGAVVDV+F+ LP IL A+E + RLVLEVAQH+GE VRTIAMD TEGLV
Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLV 68
Query: 148 RGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQ 207
RGQ V +TG+PI VPVG TLGRIMNVIGEP+DE+G +K E IH+EAP + +Q+TE
Sbjct: 69 RGQEVKDTGNPILVPVGVGTLGRIMNVIGEPVDEQGPVKAEDMRAIHQEAPLYTDQSTEA 128
Query: 208 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 267
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINNVAKAHGG+SVFAGVGERT
Sbjct: 129 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERT 188
Query: 268 REGNDLYREMIESGVIKLGDKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEG 327
REGNDLY E IESGV K G + SKCALVYGQMNEPPGARARV L+GLTVAEHFRD +G
Sbjct: 189 REGNDLYHEFIESGVNKKGGGEG-SKCALVYGQMNEPPGARARVALSGLTVAEHFRD-QG 246
Query: 328 QDVLLFIDNIFRFTQ 342
QDVL F+DNIFRFTQ
Sbjct: 247 QDVLFFVDNIFRFTQ 261
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,539,250
Number of Sequences: 539616
Number of extensions: 5770009
Number of successful extensions: 26819
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2229
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 20779
Number of HSP's gapped (non-prelim): 3191
length of query: 348
length of database: 191,569,459
effective HSP length: 118
effective length of query: 230
effective length of database: 127,894,771
effective search space: 29415797330
effective search space used: 29415797330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)