Query 018958
Match_columns 348
No_of_seqs 301 out of 1884
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 08:41:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018958.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018958hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj3_A Cathepsin L-like protei 100.0 5.1E-86 1.7E-90 626.8 33.8 306 38-348 13-331 (331)
2 3qt4_A Cathepsin-L-like midgut 100.0 1.4E-85 4.7E-90 622.5 31.7 303 38-348 18-329 (329)
3 3tnx_A Papain; hydrolase, cyto 100.0 5.6E-85 1.9E-89 623.3 36.0 302 37-348 56-362 (363)
4 1pci_A Procaricain; zymogen, h 100.0 1.1E-84 3.9E-89 615.7 34.7 303 39-348 14-321 (322)
5 1by8_A Protein (procathepsin K 100.0 7.8E-85 2.7E-89 615.2 32.7 304 40-348 4-314 (314)
6 2c0y_A Procathepsin S; proenzy 100.0 5.2E-85 1.8E-89 616.7 30.5 304 39-348 4-315 (315)
7 1cs8_A Human procathepsin L; p 100.0 4.7E-84 1.6E-88 610.3 32.3 299 42-348 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 3.1E-83 1.1E-87 603.2 28.9 295 45-348 3-306 (310)
9 1xkg_A DER P I, major mite fec 100.0 5.1E-79 1.7E-83 574.0 27.0 287 46-348 7-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 2E-72 6.7E-77 549.9 24.6 279 62-346 135-433 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 7.1E-71 2.4E-75 521.7 21.0 275 65-347 2-311 (325)
12 1cqd_A Protein (protease II); 100.0 1.8E-66 6.1E-71 467.7 25.8 212 135-348 2-217 (221)
13 3pbh_A Procathepsin B; thiol p 100.0 8.9E-67 3.1E-71 492.6 23.8 261 74-347 11-313 (317)
14 1iwd_A Ervatamin B; cysteine p 100.0 4.1E-66 1.4E-70 463.4 25.3 210 136-348 1-214 (215)
15 3kwz_A Cathepsin K; enzyme inh 100.0 3.6E-66 1.2E-70 464.1 24.7 211 136-348 1-215 (215)
16 3ovx_A Cathepsin S; hydrolase, 100.0 2.5E-66 8.4E-71 466.2 23.2 212 136-348 2-218 (218)
17 3p5u_A Actinidin; SAD, cystein 100.0 3.7E-66 1.3E-70 465.5 24.3 212 136-348 1-217 (220)
18 1ppo_A Protease omega; hydrola 100.0 6.3E-66 2.1E-70 462.6 24.6 210 136-348 1-215 (216)
19 1yal_A Chymopapain; hydrolase, 100.0 1.3E-65 4.4E-70 461.2 25.2 210 136-348 1-215 (218)
20 2xu3_A Cathepsin L1; hydrolase 100.0 1.6E-65 5.4E-70 461.4 24.9 212 136-348 1-220 (220)
21 1s4v_A Cysteine endopeptidase; 100.0 1.5E-65 5E-70 464.1 24.4 214 135-348 1-219 (229)
22 3f75_A Toxopain-2, cathepsin L 100.0 6.3E-66 2.2E-70 465.4 21.4 215 134-348 5-224 (224)
23 2fo5_A Cysteine proteinase EP- 100.0 1.4E-65 4.6E-70 471.8 23.1 215 134-348 2-224 (262)
24 1o0e_A Ervatamin C; plant cyst 100.0 3.7E-65 1.3E-69 454.9 24.5 205 136-348 1-207 (208)
25 2cio_A Papain; hydrolase/inhib 100.0 5.5E-65 1.9E-69 455.2 25.2 206 136-348 1-211 (212)
26 3u8e_A Papain-like cysteine pr 100.0 2.1E-65 7.1E-70 461.2 22.1 210 136-348 1-219 (222)
27 8pch_A Cathepsin H; hydrolase, 100.0 2.5E-65 8.7E-70 460.2 22.3 210 136-347 1-217 (220)
28 1m6d_A Cathepsin F, catsf; pap 100.0 8.5E-65 2.9E-69 454.7 23.7 208 136-348 1-213 (214)
29 3i06_A Cruzipain; autocatalyti 100.0 8.6E-65 2.9E-69 455.0 23.8 208 136-348 1-214 (215)
30 2bdz_A Mexicain; cysteine prot 100.0 1.2E-64 4.2E-69 453.5 24.6 206 136-348 1-211 (214)
31 3ioq_A CMS1MS2; caricaceae, cy 100.0 1E-64 3.5E-69 453.9 23.3 206 136-348 1-211 (213)
32 2b1m_A SPE31; papain-like, sug 100.0 1.7E-64 5.8E-69 461.5 24.7 210 135-348 1-224 (246)
33 2oul_A Falcipain 2; cysteine p 100.0 1.4E-64 4.8E-69 461.0 23.9 210 135-348 17-240 (241)
34 3bwk_A Cysteine protease falci 100.0 1.8E-64 6.1E-69 460.9 23.2 210 135-348 19-242 (243)
35 3f5v_A DER P 1 allergen; aller 100.0 1.2E-64 4.1E-69 456.4 21.7 210 134-348 8-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 7.8E-60 2.7E-64 435.8 21.5 208 135-347 6-256 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 2E-59 6.9E-64 430.4 22.0 209 135-347 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 2E-59 6.9E-64 434.9 21.2 207 134-347 34-274 (277)
39 2wbf_X Serine-repeat antigen p 100.0 9.2E-54 3.1E-58 395.3 22.7 206 138-345 9-255 (265)
40 3ois_A Cysteine protease; alph 100.0 2.1E-52 7.3E-57 390.8 14.0 232 88-333 13-272 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 1.1E-41 3.8E-46 331.0 14.3 196 135-333 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 3.5E-40 1.2E-44 320.8 19.1 204 136-346 53-422 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 1.1E-34 3.9E-39 276.3 19.8 184 147-333 21-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 2.2E-19 7.5E-24 141.1 9.7 75 39-114 17-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 1.7E-18 5.7E-23 130.0 6.7 68 44-113 7-77 (80)
46 1pxv_A Cysteine protease; hydr 97.1 0.0061 2.1E-07 51.0 11.4 131 152-335 25-164 (183)
47 1cv8_A Staphopain; cysteine pr 97.1 0.015 5.1E-07 48.5 13.4 121 152-320 16-145 (174)
48 1x9y_A Cysteine proteinase; ha 96.9 0.015 5.1E-07 53.7 13.3 129 152-333 201-338 (367)
49 3erv_A Putative C39-like pepti 89.5 1.1 3.7E-05 39.5 7.9 64 247-318 125-196 (236)
50 1dki_A Pyrogenic exotoxin B zy 43.6 61 0.0021 30.2 7.6 54 255-332 290-344 (371)
51 3bb7_A Interpain A; cysteine p 41.2 58 0.002 29.7 6.9 59 255-332 239-298 (321)
52 4d8b_A Streptopain; papain fol 37.1 62 0.0021 28.6 6.2 54 255-332 172-226 (261)
53 2r9f_A Calpain-1 catalytic sub 25.2 69 0.0024 29.4 4.6 38 294-331 246-312 (339)
54 1th5_A NIFU1; iron-sulfur clus 22.3 37 0.0013 23.9 1.6 27 148-176 37-63 (74)
55 2nqa_A Calpain 8; calpain, cal 20.0 99 0.0034 28.1 4.5 38 294-331 241-307 (326)
No 1
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=5.1e-86 Score=626.79 Aligned_cols=306 Identities=40% Similarity=0.738 Sum_probs=272.7
Q ss_pred CCchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHHHHHcccCCC
Q 018958 38 THEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMP 114 (348)
Q Consensus 38 ~~~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~---~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~ 114 (348)
.++..++.+|++||++|+|+|.+.+|+.+|++||++|+++|++||++ ++.+|++|+|+|+|||.|||++++++.+++
T Consensus 13 ~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~ 92 (331)
T 3qj3_A 13 LPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMP 92 (331)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCC
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccc
Confidence 36778999999999999999999899999999999999999999986 568999999999999999999998876653
Q ss_pred CCCCCCCCCccccccC----CCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCC--cccCCHHHH
Q 018958 115 SPSHRSTTSSTFKYQN----LSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGN--LIQLSEQQL 188 (348)
Q Consensus 115 ~~~~~~~~~~~~~~~~----~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~--~~~LS~q~l 188 (348)
...... ...+.... ....+||++||||+.|+||||||||.||||||||++++||++++++++. .++||+|+|
T Consensus 93 ~~~~~~--~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~L 170 (331)
T 3qj3_A 93 ADLHKN--GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQL 170 (331)
T ss_dssp SSTTTT--CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHH
T ss_pred cccccc--CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHH
Confidence 221110 11111110 0113799999999999999999999999999999999999999999998 899999999
Q ss_pred hhhcCCCCCCCCCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeE
Q 018958 189 LDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVS 267 (348)
Q Consensus 189 ~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~ 267 (348)
+||+.. +.||+||++..|+.|+.+++|+++|++|||.+..+.|........+++.+|..++..++++||++|+ +|||+
T Consensus 171 vdC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~ 249 (331)
T 3qj3_A 171 VDCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVA 249 (331)
T ss_dssp HHHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCEE
T ss_pred hhhccC-CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCEE
Confidence 999986 8999999999999999988899999999999999999987667778999999998779999999998 69999
Q ss_pred EEEEecchhhccccCceEeCC-CC-CCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC-CcccccCcee
Q 018958 268 IAIAAYSTEFQSYKEGIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSS 344 (348)
Q Consensus 268 v~~~~~~~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~ 344 (348)
|+|++. .+|+.|++|||..+ |+ ..++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++
T Consensus 250 v~i~a~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~ 327 (331)
T 3qj3_A 250 VAFDAD-DPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVAS 327 (331)
T ss_dssp EEECCC-TTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCE
T ss_pred EEEEcc-cccccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcCCcee
Confidence 999998 45999999999986 75 678999999999987 8999999999999999999999999996 9999999999
Q ss_pred eeeC
Q 018958 345 YPLA 348 (348)
Q Consensus 345 ~p~~ 348 (348)
||++
T Consensus 328 ~p~v 331 (331)
T 3qj3_A 328 VPTL 331 (331)
T ss_dssp EEEC
T ss_pred eeeC
Confidence 9986
No 2
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=1.4e-85 Score=622.48 Aligned_cols=303 Identities=38% Similarity=0.743 Sum_probs=268.1
Q ss_pred CCchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHHHHHcccCCC
Q 018958 38 THEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMP 114 (348)
Q Consensus 38 ~~~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~---~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~ 114 (348)
+++..++.+|++||++|+|+|.+.+|+.+|++||++|+++|++||++ ++.+|++|+|+|+|||.|||++ +++.+++
T Consensus 18 ~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~ 96 (329)
T 3qt4_A 18 LPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKA 96 (329)
T ss_dssp --CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCC
T ss_pred cCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCccc
Confidence 36778999999999999999999899999999999999999999985 5689999999999999999999 7776542
Q ss_pred CCCCCCC-CCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcC
Q 018958 115 SPSHRST-TSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCST 193 (348)
Q Consensus 115 ~~~~~~~-~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~ 193 (348)
....... ....+.... .+||++||||++ +||||||||.||||||||++++||++++++++++++||||+|+||+.
T Consensus 97 ~~~~~~~~~~~~~~~~~---~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~ 172 (329)
T 3qt4_A 97 QKPKHPENLRMPYVSSK---KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSS 172 (329)
T ss_dssp C------CCEEECCCCC---SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCG
T ss_pred ccccccccccccccCCc---cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhcc
Confidence 2110100 011111111 379999999999 99999999999999999999999999999999999999999999987
Q ss_pred C-CCCCCCCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEE
Q 018958 194 N-GNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIA 271 (348)
Q Consensus 194 ~-~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~ 271 (348)
. ++.||+||++..|+.|+.++ |+++|++|||.+..+.|.........++.+|..++..++++||++|+ +|||+|+|+
T Consensus 173 ~~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~ 251 (329)
T 3qt4_A 173 SYGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAID 251 (329)
T ss_dssp GGTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCcccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEe
Confidence 4 57899999999999999998 99999999999999999987666778999999998789999999998 699999999
Q ss_pred ecchhhccccCceEeCC-CC-CCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC-CcccccCceeeeeC
Q 018958 272 AYSTEFQSYKEGIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 348 (348)
Q Consensus 272 ~~~~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 348 (348)
+. .+|+.|++|||..+ |. ..++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 252 a~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~yp~v 329 (329)
T 3qt4_A 252 AT-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGIATAASYPAL 329 (329)
T ss_dssp CC-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTTTCEEEEC
T ss_pred cC-hhhhhccCceeecCCCCCCcCCEEEEEEEEEee-CCccEEEEEeCCCCcccCCcEEEEEeCCCCccCCCCceeEeeC
Confidence 98 59999999999986 75 678999999999997 8999999999999999999999999997 99999999999986
No 3
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=5.6e-85 Score=623.30 Aligned_cols=302 Identities=43% Similarity=0.809 Sum_probs=265.8
Q ss_pred CCCchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHHHHHcccCCCCC
Q 018958 37 STHEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSP 116 (348)
Q Consensus 37 ~~~~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~~~ 116 (348)
...++++.++|++||++|+|+|.+.+|+.+|++||++|+++|++||++. .+|++|+|+|+|||.|||++++++..+...
T Consensus 56 l~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~-~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~ 134 (363)
T 3tnx_A 56 LTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKN-NSYWLGLNVFADMSNDEFKEKYTGSIAGNY 134 (363)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSC-CSEEECSCTTTTSCHHHHHHHHSCSSCSCC
T ss_pred hcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCC-CCeEEeccccccCCHHHHHHHhcccccccc
Confidence 3457789999999999999999999999999999999999999999874 799999999999999999999987655432
Q ss_pred CCCCCCCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCC
Q 018958 117 SHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGN 196 (348)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~ 196 (348)
.......... ......+||++||||++|+||||||||.||||||||+++++|++++++++.++.||+|+|+||+.. +
T Consensus 135 ~~~~~~~~~~--~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~-~ 211 (363)
T 3tnx_A 135 TTTELSYEEV--LNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR-S 211 (363)
T ss_dssp CCSSSSSSCC--CCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-S
T ss_pred cccccccccc--cCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC-C
Confidence 2111001111 111223799999999999999999999999999999999999999999999999999999999985 7
Q ss_pred CCCCCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCC-CCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecch
Q 018958 197 NGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAA-QKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYST 275 (348)
Q Consensus 197 ~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~ 275 (348)
.||+||.+..|+.|+.++ |+++|++|||.+..+.|... ......++.++..++..++..++.++++|||+|++++..+
T Consensus 212 ~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~~ 290 (363)
T 3tnx_A 212 YGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGK 290 (363)
T ss_dssp CTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCSH
T ss_pred CCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecch
Confidence 899999999999999876 99999999999988877754 3445667888888888899999999999999999998778
Q ss_pred hhccccCceEeCCCCCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 276 EFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 276 ~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
+|++|++|||..+|+..++|||+|||||++ |||||||||++|||+|||||+||. |+|||++.|+||+.
T Consensus 291 ~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~~-----YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPik 362 (363)
T 3tnx_A 291 DFQLYRGGIFVGPCGNKVDHAVAAVGYGPN-----YILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 362 (363)
T ss_dssp HHHTEEEEEECCCCCSCCCEEEEEEEEETT-----EEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEEC
T ss_pred hhhCCCCCEECCCCCCCCCeEEEEEEcCCC-----cEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeeccc
Confidence 999999999999998889999999999864 999999999999999999999994 56999999999984
No 4
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=1.1e-84 Score=615.69 Aligned_cols=303 Identities=45% Similarity=0.875 Sum_probs=269.7
Q ss_pred CchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHHHHHcccCCCCCCC
Q 018958 39 HEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSH 118 (348)
Q Consensus 39 ~~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~~~~~ 118 (348)
.+.++..+|++||++|+|+|.+.+|+.+|+.+|++|+++|++||++ +.+|++|+|+|+|||.+||++++++...+....
T Consensus 14 ~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 92 (322)
T 1pci_A 14 STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYVGSLIDATIE 92 (322)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSC
T ss_pred chHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhcCCCCccccc
Confidence 4667889999999999999998999999999999999999999987 479999999999999999999888765432211
Q ss_pred CCCCCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCC
Q 018958 119 RSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNG 198 (348)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~g 198 (348)
.. ....+.... ..+||++||||+.|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.|
T Consensus 93 ~~-~~~~~~~~~--~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~-~~~g 168 (322)
T 1pci_A 93 QS-YDEEFINED--IVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHG 168 (322)
T ss_dssp CC-CSEECCCCC--CCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT-TSCG
T ss_pred cc-ccccccccc--ccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC-CCCC
Confidence 00 011111111 2379999999999999999999999999999999999999999999999999999999997 4789
Q ss_pred CCCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCC-CCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhh
Q 018958 199 CLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQ-KPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEF 277 (348)
Q Consensus 199 c~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f 277 (348)
|+||++..|++|+.++ |+++|++|||.+..+.|.... ....++|.+|..++.+++++|+++|++|||+|+|+++..+|
T Consensus 169 C~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~~~~f 247 (322)
T 1pci_A 169 CKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPF 247 (322)
T ss_dssp GGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTTCHHH
T ss_pred CCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEecccccc
Confidence 9999999999999987 899999999999999998763 34567899999998779999999999999999999976799
Q ss_pred ccccCceEeCCCCCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 278 QSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 278 ~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
+.|++|||.++|+..++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 248 ~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 248 QLYKGGIFEGPCGTKVDGAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp HTEEEEEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred cccCCeEeCCCCCCCCCEEEEEEEEecc-CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 9999999998898888999999999998 7999999999999999999999999995 99999999999985
No 5
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=7.8e-85 Score=615.18 Aligned_cols=304 Identities=41% Similarity=0.780 Sum_probs=268.0
Q ss_pred chhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHHHHHcccCCCCC
Q 018958 40 EQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMPSP 116 (348)
Q Consensus 40 ~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~---~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~~~ 116 (348)
+.+++.+|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||++++++..++..
T Consensus 4 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 83 (314)
T 1by8_A 4 EEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLS 83 (314)
T ss_dssp -CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSC
T ss_pred cHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcc
Confidence 446788999999999999998899999999999999999999975 34789999999999999999988877654322
Q ss_pred CCCCCCCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCC
Q 018958 117 SHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGN 196 (348)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~ 196 (348)
.... ...+... .....||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. ++
T Consensus 84 ~~~~--~~~~~~~-~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~ 159 (314)
T 1by8_A 84 HSRS--NDTLYIP-EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-EN 159 (314)
T ss_dssp CCCS--SSSSBCC-CCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT-TS
T ss_pred cccC--Ccccccc-ccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CC
Confidence 1110 1111111 111239999999999999999999999999999999999999999999999999999999997 58
Q ss_pred CCCCCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecch
Q 018958 197 NGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYST 275 (348)
Q Consensus 197 ~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~ 275 (348)
.||+||++..|++|+.++.|+++|++|||.+..+.|.........++.+|..++..++++||++|+ +|||+|+|++..+
T Consensus 160 ~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~ 239 (314)
T 1by8_A 160 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLT 239 (314)
T ss_dssp CGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCGGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSH
T ss_pred CCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCCccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChH
Confidence 999999999999999876799999999999999999876555667899999998779999999998 6999999999867
Q ss_pred hhccccCceEeCC-CCC-CCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcC-CCcccccCceeeeeC
Q 018958 276 EFQSYKEGIFNGV-CGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD-EGLCGIGTRSSYPLA 348 (348)
Q Consensus 276 ~f~~y~~Giy~~~-~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~~p~~ 348 (348)
+|+.|++|||..+ |+. .++|||+|||||++ +|++|||||||||++||++|||||+|+ .|.|||++.++||++
T Consensus 240 ~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 240 SFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 314 (314)
T ss_dssp HHHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBTTTSTBTTEEEECCSSSCGGGTTSSCEEECC
T ss_pred HhhhccCceecCCCCCCCCCCeEEEEEEEecc-CCceEEEEEcCCCCCcCcCCEEEEEcCCCCcCCccCeeEEeeC
Confidence 9999999999987 875 78999999999998 899999999999999999999999999 599999999999985
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=5.2e-85 Score=616.65 Aligned_cols=304 Identities=39% Similarity=0.785 Sum_probs=268.2
Q ss_pred CchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHHHHHcccCCCC
Q 018958 39 HEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMPS 115 (348)
Q Consensus 39 ~~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~---~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~~ 115 (348)
.+.++..+|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||++++++..++.
T Consensus 4 ~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~ 83 (315)
T 2c0y_A 4 KDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPS 83 (315)
T ss_dssp CCGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCc
Confidence 4557888999999999999988889999999999999999999975 3579999999999999999998887765432
Q ss_pred CCCCCCCCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhc-CC
Q 018958 116 PSHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCS-TN 194 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~-~~ 194 (348)
.... ...+.. + ...+||++||||+.|+|+||||||.||||||||++++||++++++++..++||+|+|+||+ ..
T Consensus 84 ~~~~---~~~~~~-~-~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~ 158 (315)
T 2c0y_A 84 QWQR---NITYKS-N-PNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 158 (315)
T ss_dssp GGGS---CBCC--------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGG
T ss_pred cccC---CccccC-c-ccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccc
Confidence 2100 111111 1 1126999999999999999999999999999999999999999999999999999999998 42
Q ss_pred -CCCCCCCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEe
Q 018958 195 -GNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAA 272 (348)
Q Consensus 195 -~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~ 272 (348)
++.||+||++..|+.|+.++.|+++|++|||.+..+.|.........+|.+|..++..++++||++|+ +|||+|+|++
T Consensus 159 ~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~ 238 (315)
T 2c0y_A 159 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDA 238 (315)
T ss_dssp GTCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred cCCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCCcccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEec
Confidence 47899999999999999876799999999999999999876555667899999998779999999998 6999999999
Q ss_pred cchhhccccCceEeCC-CCCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcC-CCcccccCceeeeeC
Q 018958 273 YSTEFQSYKEGIFNGV-CGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD-EGLCGIGTRSSYPLA 348 (348)
Q Consensus 273 ~~~~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~~p~~ 348 (348)
..++|+.|++|||..+ |+..++|||+|||||++ +|++|||||||||++||++|||||+|+ .|.|||++.++||++
T Consensus 239 ~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 239 RHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 315 (315)
T ss_dssp CSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred CchhhhccCCCcccCCCCCCcCCEEEEEEEEeec-CCCcEEEEEcCCCCCcCCCcEEEEEcCCCCccCcCceeEEeeC
Confidence 8679999999999987 88888999999999998 899999999999999999999999999 599999999999985
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=4.7e-84 Score=610.35 Aligned_cols=299 Identities=42% Similarity=0.839 Sum_probs=264.8
Q ss_pred hHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHHHHHcccCCCCCCC
Q 018958 42 SVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSH 118 (348)
Q Consensus 42 ~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~---~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~~~~~ 118 (348)
.+..+|++||++|+|+| +.+|+.+|++||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++..++...
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 57889999999999999 7889999999999999999999975 357999999999999999999888876543221
Q ss_pred CCCCCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCC-CCC
Q 018958 119 RSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNN 197 (348)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~-~~~ 197 (348)
. ...+.. ....+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. ++.
T Consensus 85 ~---~~~~~~--~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 85 K---GKVFQE--PLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp C---CEECCC--CTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred c---CccccC--ccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 1 111111 1123799999999999999999999999999999999999999999999999999999999863 478
Q ss_pred CCCCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchh
Q 018958 198 GCLGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTE 276 (348)
Q Consensus 198 gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~ 276 (348)
||+||++..|+.|+.++.|+++|++|||.+..+.|........+++.+|..++. ++++||++|+ +|||+|+|++..++
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~~ 238 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHES 238 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCCccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCChh
Confidence 999999999999998667999999999999999998765556788999999986 8999999998 69999999998669
Q ss_pred hccccCceEeCC-CCC-CCCeEEEEEEEe---ecCCCccEEEEEcCCCCCCCCCceEEEEcCC-CcccccCceeeeeC
Q 018958 277 FQSYKEGIFNGV-CGT-QLDHAVTIVGFG---TTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 348 (348)
Q Consensus 277 f~~y~~Giy~~~-~~~-~~~Hav~iVGyg---~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 348 (348)
|+.|++|||..+ |+. .++|||+||||| ++++|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 239 f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 239 FLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316 (316)
T ss_dssp HHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred hccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCCCccCccceeeEeeC
Confidence 999999999987 875 789999999999 5447899999999999999999999999996 89999999999985
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=3.1e-83 Score=603.22 Aligned_cols=295 Identities=37% Similarity=0.763 Sum_probs=259.1
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHHHHHcc-cCCCCCCCCC
Q 018958 45 EIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTG-YKMPSPSHRS 120 (348)
Q Consensus 45 ~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~---~~~s~~~g~N~FsD~t~eE~~~~~~~-~~~~~~~~~~ 120 (348)
.+|++||++|+|+|.+.+|+.+| +||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++ ...+......
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 57999999999999888899999 9999999999999975 35799999999999999999988877 4432111000
Q ss_pred CCCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCC-CCCCC
Q 018958 121 TTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGC 199 (348)
Q Consensus 121 ~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~-~~~gc 199 (348)
...+.... .+||++||||+.|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.. ++.||
T Consensus 82 --~~~~~~~~---~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC 156 (310)
T 2o6x_A 82 --GVPYEANN---RAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGC 156 (310)
T ss_dssp --SEECCC-------CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGG
T ss_pred --CCcccccc---CCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCC
Confidence 01111111 1699999999999999999999999999999999999999999999999999999999863 47899
Q ss_pred CCCChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhc
Q 018958 200 LGGSREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQ 278 (348)
Q Consensus 200 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~ 278 (348)
+||++..|++|+. +.|+++|++|||.+..+.|.........++.+|..++..++++||++|+ +|||+|+|++. .+|+
T Consensus 157 ~GG~~~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~ 234 (310)
T 2o6x_A 157 GGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDFM 234 (310)
T ss_dssp GCCCHHHHHHHHT-TSCBCBTTTSCCCSSCCCCCCCGGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHHH
T ss_pred CCCCHHHHHHHHH-HCCcCchhcCCCCCCCCCccCCCCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhhh
Confidence 9999999999998 5699999999999999999876555678899999998779999999998 69999999998 6999
Q ss_pred cccCceEeCC-CC-CCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC-CcccccCceeeeeC
Q 018958 279 SYKEGIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 348 (348)
Q Consensus 279 ~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 348 (348)
.|++|||..+ |+ ..++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 235 ~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 235 MYRSGIYQSQTCSPLRVNHAVLAVGYGTQ-GGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 306 (310)
T ss_dssp TEEEEEECCSSCCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSEEEEEE
T ss_pred hCCCceecCCCCCCCCCCEEEEEEEEecc-CCceEEEEEeCCCCccCCCcEEEEEcCCCCcCCccceeeEEEe
Confidence 9999999965 87 478999999999998 8999999999999999999999999996 89999999999974
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=5.1e-79 Score=573.99 Aligned_cols=287 Identities=27% Similarity=0.505 Sum_probs=248.7
Q ss_pred HHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHHHHHcccCCCCCCCCCCCCcc
Q 018958 46 IHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRSTTSST 125 (348)
Q Consensus 46 ~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~~~~~~~~~~~~ 125 (348)
+|++||++|+|.|.+.+|+.+|+.+|++|+++|++ |+ + |+|+|+|||.+||++++++...+...... ...
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~----~---g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~--~~~ 76 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG----G---AINHLSDLSLDEFKNRFLMSAEAFEHLKT--QFD 76 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC----C---CCCTTTTSCHHHHHHHHSBCHHHHHHHHH--HHC
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc----C---CCCcccCCCHHHHHHHhcCCCCccccccC--Ccc
Confidence 59999999999999889999999999999999999 74 2 99999999999999877763221100000 000
Q ss_pred ccccC---CCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCC
Q 018958 126 FKYQN---LSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGG 202 (348)
Q Consensus 126 ~~~~~---~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG 202 (348)
+.... ....+||++||||+.|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. ..||+||
T Consensus 77 ~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~GC~GG 154 (312)
T 1xkg_A 77 LNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS--QHGCHGD 154 (312)
T ss_dssp -----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCC
T ss_pred cccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC--CCCCCCC
Confidence 10000 001279999999999999999999999999999999999999999999999999999999982 3899999
Q ss_pred ChHHHHHHHHHcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHHc--CCeEEEEEecch-hhcc
Q 018958 203 SREKAFAYIIQNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSM--QPVSIAIAAYST-EFQS 279 (348)
Q Consensus 203 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~~--gPV~v~~~~~~~-~f~~ 279 (348)
++..|++|+.+ .|+++|++|||.+..+.|. ......++|.+|..++..++++||++|+. |||+|+|++... +|+.
T Consensus 155 ~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~C~-~~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~ 232 (312)
T 1xkg_A 155 TIPRGIEYIQH-NGVVQESYYRYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRH 232 (312)
T ss_dssp CHHHHHHHHHH-HCEEBGGGSCCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHT
T ss_pred CHHHHHHHHHH-cCCCccccCCccCCCCCCC-CCCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccc
Confidence 99999999998 5999999999999999999 54456788999999987799999999974 999999999844 8999
Q ss_pred ccCceEeCC-CC-C-CCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeeeeC
Q 018958 280 YKEGIFNGV-CG-T-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA 348 (348)
Q Consensus 280 y~~Giy~~~-~~-~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~~ 348 (348)
|++|||..+ |+ . . +|||+|||||++ +|++|||||||||++||++|||||+|+.|.|||++.++||++
T Consensus 233 Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 233 YDGRTIIQRDNGYQPN-YHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 302 (312)
T ss_dssp CCSSSCBCCCCSSCCE-EEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEEC
T ss_pred cCCcEEcCCCCCCCcC-ceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeec
Confidence 999999986 76 4 6 999999999998 899999999999999999999999999999999999999974
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=2e-72 Score=549.86 Aligned_cols=279 Identities=27% Similarity=0.533 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCceEEE-cccCCCCCHHHHHHHHcccCCCCCCCCCCCCccccccCCCCCCCCCce
Q 018958 62 LEKEMRLKIFKENLEYIEKANKEGNRTYKLG-TNQFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSL 140 (348)
Q Consensus 62 ~E~~~R~~~f~~n~~~I~~~N~~~~~s~~~g-~N~FsD~t~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~ 140 (348)
.|+..|++||++|+++|++||++. .+|++| +|+|+|||.+||++++++.+.+............... ...+||++|
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~-~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lP~s~ 211 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQ-KSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQ--KILFLPTSW 211 (441)
T ss_dssp --------------------------------------------------------------------------CCCSCE
T ss_pred hhHHHHHHHHHHHHHHHHHHHccC-CceEeecccccccCCHHHHHHHhCCCcccccccccCcccccccc--ccccCCCCE
Confidence 567899999999999999999875 689998 8999999999999988765433221110000000011 123799999
Q ss_pred ecccCC---CCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcc--cCCHHHHhhhcCCCCCCCCCCChHHH-HHHHHHc
Q 018958 141 DWRDKG---AVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLI--QLSEQQLLDCSTNGNNGCLGGSREKA-FAYIIQN 214 (348)
Q Consensus 141 Dwr~~g---~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~--~LS~q~l~dc~~~~~~gc~GG~~~~a-~~~~~~~ 214 (348)
|||+.+ +|+||||||.||||||||++++||++++++++..+ .||||+|+||+.. +.||+||.+..+ +.|+.++
T Consensus 212 DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~-~~GC~GG~~~~aa~~yi~~~ 290 (441)
T 3pdf_A 212 DWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQY-AQGCEGGFPYLIAGKYAQDF 290 (441)
T ss_dssp ETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHTTHHHHHT
T ss_pred ECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccC-CCCCCCCchhHHHHHHHHhc
Confidence 999963 89999999999999999999999999999998765 4999999999974 899999999987 8999876
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCcceeecceEecC----CccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCCC
Q 018958 215 QGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVP----SGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVC 289 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~----~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~ 289 (348)
|+++|++|||.+..+.|..........+.+|..++ ..++++||++|+ +|||+|+|++. ++|++|++|||..++
T Consensus 291 -Gi~tE~~yPY~~~~~~C~~~~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~~~ 368 (441)
T 3pdf_A 291 -GLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHHTG 368 (441)
T ss_dssp -CBCBGGGSCCCSSCCCSCCCSSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECCC-
T ss_pred -CCCcHHHeeecccCCCCCCccccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEecCC
Confidence 99999999999999999986555667788888885 257999999987 79999999998 799999999998763
Q ss_pred -C------CCCCeEEEEEEEeec-CCCccEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeee
Q 018958 290 -G------TQLDHAVTIVGFGTT-EDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYP 346 (348)
Q Consensus 290 -~------~~~~Hav~iVGyg~~-~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p 346 (348)
. ..++|||+|||||++ ++|++|||||||||++|||+|||||+|+.|.|||++.++++
T Consensus 369 ~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~ 433 (441)
T 3pdf_A 369 LRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAA 433 (441)
T ss_dssp --CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEE
T ss_pred CCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEe
Confidence 2 248999999999986 47999999999999999999999999999999999998864
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=7.1e-71 Score=521.71 Aligned_cols=275 Identities=26% Similarity=0.513 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCceEEEcc-cCCCCCHHHHHHHHcccCCCCCCCCCCCCccccccCCCCCCCCCceecc
Q 018958 65 EMRLKIFKENLEYIEKANKEGNRTYKLGTN-QFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWR 143 (348)
Q Consensus 65 ~~R~~~f~~n~~~I~~~N~~~~~s~~~g~N-~FsD~t~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr 143 (348)
+.|+..+..+.++|++||++++.+|++|+| +|+|||.|||+++ ++..+............+...+. ..+||++||||
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~lP~s~DwR 79 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRL-NGVIKKNNNASILPKRRFTEEEA-RAPLPSSFDSA 79 (325)
T ss_dssp -------------------------------------------------------CCSCBCCCCHHHH-HCCCCSCEEHH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHH-hCCCCCCcccccccCcccccccc-ccCCCCcEehh
Confidence 467888899999999999876689999999 8999999999876 44433221100000111111111 13799999999
Q ss_pred cC----CCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCC-cccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcCCcc
Q 018958 144 DK----GAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGN-LIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIA 218 (348)
Q Consensus 144 ~~----g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~-~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~ 218 (348)
++ |.|+||||||.||||||||++++||++++++++. .++||||+|+||+...+.||+||++..|++|++++ |++
T Consensus 80 ~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi~ 158 (325)
T 3hhi_A 80 EAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GLV 158 (325)
T ss_dssp HHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CBC
T ss_pred HhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CCC
Confidence 98 8999999999999999999999999999999997 89999999999987546899999999999999987 999
Q ss_pred CCCCCCCC-CC----------CCCCCCC----------------CCCcceeecceEecCCccHHHHHHHHH-cCCeEEEE
Q 018958 219 TEDEYPYQ-AV----------PGTCSAA----------------QKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAI 270 (348)
Q Consensus 219 ~e~~yPY~-~~----------~~~C~~~----------------~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~ 270 (348)
+|++|||. +. .+.|... .......+..|. + .++++||++|+ +|||+|+|
T Consensus 159 ~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~i 235 (325)
T 3hhi_A 159 SDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVAF 235 (325)
T ss_dssp BTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEEE
T ss_pred cccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEEE
Confidence 99999998 32 2556510 001123456676 4 58999999997 89999999
Q ss_pred EecchhhccccCceEeCCCCC-CCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeeee
Q 018958 271 AAYSTEFQSYKEGIFNGVCGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPL 347 (348)
Q Consensus 271 ~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~ 347 (348)
+++ ++|++|++|||..+|+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+.|+|||++.+++++
T Consensus 236 ~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~g~ 311 (325)
T 3hhi_A 236 DVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS-NGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGI 311 (325)
T ss_dssp EEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEEEE
T ss_pred Eec-cccccccCceecCCCCCCCCCEEEEEEEEEec-CCceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEEee
Confidence 998 79999999999988654 46999999999987 89999999999999999999999999999999999998764
No 12
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.8e-66 Score=467.74 Aligned_cols=212 Identities=50% Similarity=1.036 Sum_probs=198.8
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHc
Q 018958 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.. +.||+||++..|++|++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC-CCCCCCCCHHHHHHHHHHh
Confidence 689999999999999999999999999999999999999999999999999999999975 7899999999999999987
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCCC
Q 018958 215 QGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
+|+++|++|||.+..+.|........+++.+|..++..++++||++|++|||+++|++..++|+.|++|||+.+|+..++
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 160 (221)
T 1cqd_A 81 GGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISAN 160 (221)
T ss_dssp TSBCBTTTSCCCSSCCCCCSSSCCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCCCC
T ss_pred CCccccccCCccCCCCCcCCCCCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCcCC
Confidence 79999999999999999987655667889999999877899999999999999999998679999999999988888899
Q ss_pred eEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcC----CCcccccCceeeeeC
Q 018958 295 HAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD----EGLCGIGTRSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~----~~~Cgi~~~~~~p~~ 348 (348)
|||+|||||++ +|++|||||||||++||++|||||+|+ .|.|||+++++||++
T Consensus 161 HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 161 HALTVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred eEEEEEEEccc-CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 99999999998 899999999999999999999999998 489999999999985
No 13
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=8.9e-67 Score=492.62 Aligned_cols=261 Identities=29% Similarity=0.610 Sum_probs=211.5
Q ss_pred HHHHHHHHccCCCCceEEEcccCCCCCHHHHHHHHcccCCCCCCCCCCCCccccccCCCCCCCCCceecccC----CCCC
Q 018958 74 NLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDK----GAVT 149 (348)
Q Consensus 74 n~~~I~~~N~~~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~ 149 (348)
+.++|++||++ +.+|++|+| |+|+|.||++. ++|.+++.... ...+.... ..+||++||||++ +.|+
T Consensus 11 ~~~~i~~~N~~-~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~----~~~~~~~~--~~~lP~s~DwR~~~~~c~~vt 81 (317)
T 3pbh_A 11 SDELVNYVNKR-NTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKP----PQRVMFTE--DLKLPASFDAREQWPQCPTIK 81 (317)
T ss_dssp CHHHHHHHHHH-TCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCC----SEEECCCS--CCCCCSSEEHHHHCTTCGGGT
T ss_pred cHHHHHHHHCC-CCCeEEeec-cccCCHHHHHH-HcCCCCCcccc----Cccccccc--ccCCCCCEechhccCCCCCcC
Confidence 46789999976 479999999 99988877764 56665443221 11111111 1379999999987 6899
Q ss_pred cccCCCCCcchHHHHHHHHHHHHHHHhcCC--cccCCHHHHhhhcC-CCCCCCCCCChHHHHHHHHHcCCccCCCCC---
Q 018958 150 PIKNQKECGCCWAFAAVAAVEGITKIRSGN--LIQLSEQQLLDCST-NGNNGCLGGSREKAFAYIIQNQGIATEDEY--- 223 (348)
Q Consensus 150 pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~--~~~LS~q~l~dc~~-~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y--- 223 (348)
||||||.||||||||++++||++++++++. .+.||+|+|+||+. ..+.||+||++..|++|++++ |+++|++|
T Consensus 82 pVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~ 160 (317)
T 3pbh_A 82 EIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESH 160 (317)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCC
T ss_pred CccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCC
Confidence 999999999999999999999999999874 78999999999987 357899999999999999987 99999888
Q ss_pred ----CCCC---------CCCCCCCCCC--------Ccce---------eecceEecCCccHHHHHHHHH-cCCeEEEEEe
Q 018958 224 ----PYQA---------VPGTCSAAQK--------PAAA---------KISNYEEVPSGDEQALLKAVS-MQPVSIAIAA 272 (348)
Q Consensus 224 ----PY~~---------~~~~C~~~~~--------~~~~---------~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~ 272 (348)
||.. ..+.|..... .... .......++ .++++||++|+ +|||+|+|++
T Consensus 161 ~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~ 239 (317)
T 3pbh_A 161 VGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSV 239 (317)
T ss_dssp CBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEe
Confidence 9984 3445642100 0001 111223454 58999999997 8999999999
Q ss_pred cchhhccccCceEeCCCCCC-CCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeeee
Q 018958 273 YSTEFQSYKEGIFNGVCGTQ-LDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPL 347 (348)
Q Consensus 273 ~~~~f~~y~~Giy~~~~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~ 347 (348)
+ ++|++|++|||.++|+.. ++|||+|||||++ +|++|||||||||++|||+|||||+|+.|.|||++.++.++
T Consensus 240 ~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 240 Y-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGI 313 (317)
T ss_dssp E-GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECC
T ss_pred c-ccccCCCCcEEccCCCCCCCCEEEEEEEEEEe-CCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEeee
Confidence 7 799999999999987654 5999999999997 89999999999999999999999999999999999988653
No 14
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=4.1e-66 Score=463.38 Aligned_cols=210 Identities=52% Similarity=1.022 Sum_probs=197.0
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. +.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA-SHGCNGGWMNNAFQYIITNG 79 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC-CCCCCCCCHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999999999999999974 78999999999999999877
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCCCe
Q 018958 216 GIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDH 295 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~H 295 (348)
|+++|++|||.+..+.|.... ...+++.+|..++..++++||++|++|||+++|++...+|+.|++|||..+|+..++|
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~H 158 (215)
T 1iwd_A 80 GIDTQQNYPYSAVQGSCKPYR-LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNH 158 (215)
T ss_dssp CBCBTTTSCCCSSCCCCCTTC-CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCCCE
T ss_pred CcccccccCccCCCCCCCCCC-CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcCCE
Confidence 999999999999989998754 3567899999998778999999998999999999985589999999999888888899
Q ss_pred EEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 296 AVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 296 av~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
||+|||||++ +|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 159 aV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 159 GVVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp EEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEEecc-CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 9999999998 8999999999999999999999999996 89999999999985
No 15
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=3.6e-66 Score=464.13 Aligned_cols=211 Identities=46% Similarity=0.918 Sum_probs=198.0
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|+||.. .+.||+||++..|++|+.++.
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNR 79 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999997 488999999999999998877
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCC-CC-CC
Q 018958 216 GIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGV-CG-TQ 292 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~~-~~ 292 (348)
|+++|++|||.+..+.|.........++.+|..++..++++||++|+ +|||++++++..++|+.|++|||..+ |. ..
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 159 (215)
T 3kwz_A 80 GIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDN 159 (215)
T ss_dssp CEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTTC
T ss_pred CccccccCCCccCCCccccCCCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCCh
Confidence 99999999999999999877666678899999998778999999998 69999999998679999999999876 74 57
Q ss_pred CCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC-CcccccCceeeeeC
Q 018958 293 LDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 348 (348)
Q Consensus 293 ~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 348 (348)
++|||+|||||++ ++++|||||||||++||++|||||+|+. |+|||++.++||++
T Consensus 160 ~~HaV~iVGyg~~-~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 160 LNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215 (215)
T ss_dssp CCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEECC
T ss_pred hhCEEEEEEEecc-CCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeeeC
Confidence 8999999999997 8899999999999999999999999996 99999999999986
No 16
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=2.5e-66 Score=466.15 Aligned_cols=212 Identities=44% Similarity=0.922 Sum_probs=198.6
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhc-CC-CCCCCCCCChHHHHHHHHH
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCS-TN-GNNGCLGGSREKAFAYIIQ 213 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~-~~-~~~gc~GG~~~~a~~~~~~ 213 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|++|+ .. ++.||+||++..|+.|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 32 4789999999999999987
Q ss_pred cCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCC-CCC
Q 018958 214 NQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGV-CGT 291 (348)
Q Consensus 214 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~~~ 291 (348)
++|+++|++|||.+..+.|.........++.+|..++..++++||++|+ +|||++++++..++|+.|++|||..+ |..
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 161 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ 161 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCCS
T ss_pred hCCcCcccccCccCCCCcccCCCccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCCc
Confidence 6799999999999999999987666778899999998778999999998 69999999998679999999999986 777
Q ss_pred CCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC-CcccccCceeeeeC
Q 018958 292 QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 348 (348)
Q Consensus 292 ~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 348 (348)
.++|||+|||||++ +|++|||||||||++||++|||||+|+. |+|||++.++||++
T Consensus 162 ~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 162 NVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 218 (218)
T ss_dssp CCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred ccCcEEEEEEEecc-CCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeeeC
Confidence 89999999999998 7899999999999999999999999996 99999999999986
No 17
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=3.7e-66 Score=465.50 Aligned_cols=212 Identities=52% Similarity=1.005 Sum_probs=197.3
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCC-CCCCCCCCChHHHHHHHHHc
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSREKAFAYIIQN 214 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~~~ 214 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+.. ++.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999975 37899999999999999987
Q ss_pred CCccCCCCCCCCCCCCCCCCCC-CCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCC
Q 018958 215 QGIATEDEYPYQAVPGTCSAAQ-KPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQL 293 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 293 (348)
+|+++|++|||.+..+.|.... ....+++.+|..++..++++|+++|++|||++++++..++|+.|++|||.++|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 7999999999999989998642 234578899999987899999999999999999999767999999999999898889
Q ss_pred CeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCC---cccccCceeeeeC
Q 018958 294 DHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEG---LCGIGTRSSYPLA 348 (348)
Q Consensus 294 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---~Cgi~~~~~~p~~ 348 (348)
+|||+|||||++ +|++|||||||||++||++|||||+|+.| +|||++.++||++
T Consensus 161 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 161 DHAVTIVGYGTE-GGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred ceEEEEEEEecC-CCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 999999999987 89999999999999999999999999976 9999999999985
No 18
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=6.3e-66 Score=462.62 Aligned_cols=210 Identities=50% Similarity=0.973 Sum_probs=196.3
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAKN- 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999987 47899999999999999987
Q ss_pred CccCCCCCCCCCCCCCCCCCC-CCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCCC
Q 018958 216 GIATEDEYPYQAVPGTCSAAQ-KPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|+... ....+++.+|..++.+++++||++|++|||+++|+++.++|+.|++|||..+|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (216)
T 1ppo_A 79 GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVD 158 (216)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCCC
T ss_pred CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCCC
Confidence 899999999999989998753 3456889999999877899999999999999999997579999999999988887789
Q ss_pred eEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 295 HAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 159 HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 159 HAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred EEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 99999999998 7899999999999999999999999994 89999999999985
No 19
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=1.3e-65 Score=461.21 Aligned_cols=210 Identities=51% Similarity=0.989 Sum_probs=196.1
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYVANN- 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 6999999999999999999999999999999999999999999999999999999985 47899999999999999987
Q ss_pred CccCCCCCCCCCCCCCCCCCC-CCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCCC
Q 018958 216 GIATEDEYPYQAVPGTCSAAQ-KPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|.... ....+++.+|..++.+++++||++|++|||+++|++..++|+.|++|||+.+|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (218)
T 1yal_A 79 GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLD 158 (218)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCCC
Confidence 899999999999988998753 3456789999999877999999999999999999997579999999999988887889
Q ss_pred eEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 295 HAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 159 HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 159 HAVTAVGYGTS-DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred EEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 99999999998 7899999999999999999999999994 89999999999985
No 20
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=1.6e-65 Score=461.44 Aligned_cols=212 Identities=47% Similarity=0.944 Sum_probs=195.1
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCC-CCCCCCCCChHHHHHHHHHc
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSREKAFAYIIQN 214 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~~~ 214 (348)
||++||||++|+++||||||.||||||||++++||+++++++++.++||+|+|+||+.. ++.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 69999999999999999999999999999999999999999999999999999999864 47899999999999999755
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCC-CCC-
Q 018958 215 QGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGV-CGT- 291 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~~~- 291 (348)
.|+++|++|||.+..+.|.........++.+|..++. ++++||++|+ +|||+++|++..++|+.|++|||..+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~~ 159 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSE 159 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCGGGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCSS
T ss_pred CCcccccccCCcccCcCccCCCCCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCCC
Confidence 6999999999999989998765556788999999986 8999999998 69999999998568999999999987 774
Q ss_pred CCCeEEEEEEEee---cCCCccEEEEEcCCCCCCCCCceEEEEcCC-CcccccCceeeeeC
Q 018958 292 QLDHAVTIVGFGT---TEDGANYWLIKNSWGNTWGDAGYMKIVRDE-GLCGIGTRSSYPLA 348 (348)
Q Consensus 292 ~~~Hav~iVGyg~---~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 348 (348)
.++|||+|||||+ +++|++|||||||||++||++|||||+|+. |+|||++.++||++
T Consensus 160 ~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 160 DMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220 (220)
T ss_dssp CCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred CCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeeeC
Confidence 7899999999995 347899999999999999999999999996 89999999999985
No 21
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=1.5e-65 Score=464.08 Aligned_cols=214 Identities=54% Similarity=1.053 Sum_probs=197.5
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHc
Q 018958 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+...+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986447899999999999999987
Q ss_pred CCccCCCCCCCCCCCCCCCCC-CCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCC
Q 018958 215 QGIATEDEYPYQAVPGTCSAA-QKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQL 293 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 293 (348)
+|+++|++|||.+..+.|... .....+++.+|..++..+++.|+++|++|||+++|++..++|+.|++|||..+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~~ 160 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTEL 160 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCCC
Confidence 799999999999998899864 2345678999999987789999999999999999999557999999999998888888
Q ss_pred CeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 294 DHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 294 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
+|||+|||||++.+|++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 161 ~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 161 DHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp CEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 99999999999844899999999999999999999999994 89999999999975
No 22
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=6.3e-66 Score=465.37 Aligned_cols=215 Identities=44% Similarity=0.938 Sum_probs=200.6
Q ss_pred CCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCC-CCCCCCCCChHHHHHHHH
Q 018958 134 TDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSREKAFAYII 212 (348)
Q Consensus 134 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~ 212 (348)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|++|+.. ++.||+||.+..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 3799999999999999999999999999999999999999999999999999999999874 478999999999999999
Q ss_pred HcCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCC
Q 018958 213 QNQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQ 292 (348)
Q Consensus 213 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 292 (348)
+++|+++|++|||.+..+.|.........++.+|..++..++++|+++|++|||++++++..++|+.|++|||++.|+..
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 164 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQSCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGTD 164 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGGGSCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCCC
T ss_pred HhCCccccccCCCcCCCCCCCcCCCCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCCc
Confidence 86699999999999999999876666667899999998789999999999999999999986699999999999768888
Q ss_pred CCeEEEEEEEeecC-CCccEEEEEcCCCCCCCCCceEEEEcCC---CcccccCceeeeeC
Q 018958 293 LDHAVTIVGFGTTE-DGANYWLIKNSWGNTWGDAGYMKIVRDE---GLCGIGTRSSYPLA 348 (348)
Q Consensus 293 ~~Hav~iVGyg~~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~---~~Cgi~~~~~~p~~ 348 (348)
++|||+|||||++. ++++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 165 ~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 165 LDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEEC
T ss_pred cCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeeeC
Confidence 99999999999874 7889999999999999999999999997 99999999999986
No 23
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=1.4e-65 Score=471.78 Aligned_cols=215 Identities=51% Similarity=1.051 Sum_probs=198.4
Q ss_pred CCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHH
Q 018958 134 TDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQ 213 (348)
Q Consensus 134 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~ 213 (348)
++||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+...+.||+||++..|++|+.+
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999644789999999999999998
Q ss_pred cCCccCCCCCCCCCCCCCCCCCC---CCc-ceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCC
Q 018958 214 NQGIATEDEYPYQAVPGTCSAAQ---KPA-AAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVC 289 (348)
Q Consensus 214 ~~Gi~~e~~yPY~~~~~~C~~~~---~~~-~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~ 289 (348)
++|+++|++|||.+..+.|.... ... .+++.+|..++.++++.|+++|++|||+++|+++.++|+.|++|||..+|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c 161 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGEC 161 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred cCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCC
Confidence 77999999999999989998653 345 67899999998778999999999999999999976799999999999888
Q ss_pred CCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 290 GTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 290 ~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
+..++|||+|||||++.+|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 162 ~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 162 GTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 888899999999999756899999999999999999999999995 56999999999985
No 24
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=3.7e-65 Score=454.91 Aligned_cols=205 Identities=53% Similarity=1.061 Sum_probs=192.3
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+++||||||.||||||||+++++|+++++++++.++||||+|+||+. .+.||+||++..|++|+.++.
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK-KNHGCLGGAFVFAYQYIINNG 79 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999999999999999986 478999999999999999877
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCCCe
Q 018958 216 GIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDH 295 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~H 295 (348)
|+++|++|||.+..+.|+. ....+++.+|..++..++++||++|++|||+++|++...+|+.|++|||+.+|+..++|
T Consensus 80 Gi~~e~~yPY~~~~~~C~~--~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~H 157 (208)
T 1o0e_A 80 GIDTQANYPYKAVQGPCQA--ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNH 157 (208)
T ss_dssp CBCBTTTSCCCSSCCCCCC--CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCCE
T ss_pred CcCcccccCccCCCCcCCC--CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcCCE
Confidence 9999999999999899986 44567899999998778999999999999999999985689999999999888888899
Q ss_pred EEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC--CcccccCceeeeeC
Q 018958 296 AVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE--GLCGIGTRSSYPLA 348 (348)
Q Consensus 296 av~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~--~~Cgi~~~~~~p~~ 348 (348)
||+|||||+ +|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 158 aV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 158 GVTIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPTK 207 (208)
T ss_dssp EEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEeCC-----CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeeec
Confidence 999999997 6999999999999999999999996 99999999999985
No 25
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=5.5e-65 Score=455.22 Aligned_cols=206 Identities=50% Similarity=0.942 Sum_probs=192.7
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR-RSYGCNGGYPWSALQLVAQY- 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHT-
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999996 47899999999999999986
Q ss_pred CccCCCCCCCCCCCCCCCCCC-CCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCCC
Q 018958 216 GIATEDEYPYQAVPGTCSAAQ-KPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~~-~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|.... ....+++.+|..++..++++||++|++|||+++|++...+|+.|++|||..+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~~ 158 (212)
T 2cio_A 79 GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD 158 (212)
T ss_dssp CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCCC
Confidence 899999999999989998764 3567889999999877899999999999999999998568999999999988887889
Q ss_pred eEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 295 HAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
|||+|||||+ +|||||||||++||++|||||+|+. |+|||+++++||++
T Consensus 159 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 159 HAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred EEEEEEEecC-----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 9999999997 6999999999999999999999995 89999999999985
No 26
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=2.1e-65 Score=461.17 Aligned_cols=210 Identities=49% Similarity=0.951 Sum_probs=190.7
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+.. +.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX-XXXXXGGDADDAFRWVITNG 79 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHHHHHT
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc-ccccCCCCHHHHHHHHHHcC
Confidence 79999999999999999999999999999999999999999999999999999999985 88999999999999999877
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccC-ceEeC-CCCC--
Q 018958 216 GIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKE-GIFNG-VCGT-- 291 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~-Giy~~-~~~~-- 291 (348)
|+++|++|||.+..+.|...... .+++.+|..++ .++++||++|++|||+++|++...+|+.|++ |||.. +|+.
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~-~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~ 157 (222)
T 3u8e_A 80 GIASDANYPYTGVDGTCDLNKPI-AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDP 157 (222)
T ss_dssp CBCBTTTSCCCSSCCCCCCCSCC-CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCG
T ss_pred CccchhcCCCcccCCccccCCCC-eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCCC
Confidence 99999999999999999876444 78899999998 7899999999999999999998569999999 99998 5775
Q ss_pred -CCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCC----cccccCceeeeeC
Q 018958 292 -QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEG----LCGIGTRSSYPLA 348 (348)
Q Consensus 292 -~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~----~Cgi~~~~~~p~~ 348 (348)
.++|||+|||||++.++++|||||||||++||++|||||+|+.| +|||+++++||++
T Consensus 158 ~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 158 ATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp GGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 68999999999997338999999999999999999999999976 9999999999985
No 27
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=2.5e-65 Score=460.17 Aligned_cols=210 Identities=42% Similarity=0.908 Sum_probs=196.4
Q ss_pred CCCceecccCC-CCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCC-CCCCCCCCChHHHHHHHHH
Q 018958 136 VPTSLDWRDKG-AVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSREKAFAYIIQ 213 (348)
Q Consensus 136 lP~~~Dwr~~g-~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~~ 213 (348)
||++||||+.| +|+||||||.||||||||++++||+++++++++.++||+|+|++|+.. .+.||+||++..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999998 899999999999999999999999999999999999999999999864 4789999999999999998
Q ss_pred cCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCC-CCC
Q 018958 214 NQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGV-CGT 291 (348)
Q Consensus 214 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~~~ 291 (348)
+.|+++|++|||.+..+.|.........++.+|..++..++++||++|+ +|||++++++. ++|+.|++|||..+ |..
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~~ 159 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCHK 159 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCCC
T ss_pred cCCcCcccccCccCCCCCCCCCCCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCCC
Confidence 7799999999999999999987666678899999998789999999998 79999999998 69999999999876 653
Q ss_pred ---CCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeeee
Q 018958 292 ---QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPL 347 (348)
Q Consensus 292 ---~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~ 347 (348)
.++|||+|||||++ +|++|||||||||++||++|||||+|+.|+|||++.++||+
T Consensus 160 ~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~ 217 (220)
T 8pch_A 160 TPDKVNHAVLAVGYGEE-NGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 217 (220)
T ss_dssp STTTCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEE
T ss_pred CCCcCCcEEEEEEEEcc-CCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEe
Confidence 68999999999987 89999999999999999999999999999999999999997
No 28
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=8.5e-65 Score=454.74 Aligned_cols=208 Identities=40% Similarity=0.794 Sum_probs=192.1
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+.. +.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~i~~~~ 79 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM-DKACMGGLPSNAYSAIKNLG 79 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhc
Confidence 69999999999999999999999999999999999999999999999999999999874 78999999999999998877
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCC---CCC
Q 018958 216 GIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGV---CGT 291 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~---~~~ 291 (348)
|+++|++|||.+....|.........++.++..++ .++++||++|+ +|||+++|++. .|++|++|||..+ |+.
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~i~-~~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~~ 156 (214)
T 1m6d_A 80 GLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELS-QNEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCSP 156 (214)
T ss_dssp CBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECC-SCHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSCT
T ss_pred CcccccCcCcCCCCCcCCCCcccceEEecCEEEeC-hHHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCCC
Confidence 99999999999988999876555567888998887 48999999997 79999999986 5999999999863 664
Q ss_pred -CCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeeeeC
Q 018958 292 -QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA 348 (348)
Q Consensus 292 -~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~~ 348 (348)
.++|||+|||||++ +|++|||||||||++|||+|||||+|+.|.|||++.++||++
T Consensus 157 ~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 157 WLIDHAVLLVGYGQR-SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp TCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred CcCCEEEEEEEEeec-CCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 58999999999997 889999999999999999999999999999999999999985
No 29
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=8.6e-65 Score=455.01 Aligned_cols=208 Identities=36% Similarity=0.760 Sum_probs=189.4
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHc-
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN- 214 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~- 214 (348)
||++||||++|+||||||||.||||||||++++||++++++++..++||||+|+||+.. +.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~~ 79 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAFEWIVQEN 79 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSS-SCGGGCCCHHHHHHHHHHHS
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCC-CCCCCCCCHHHHHHHHHHhc
Confidence 69999999999999999999999999999999999999999999999999999999874 7899999999999999875
Q ss_pred -CCccCCCCCCCCCCC---CCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCCC
Q 018958 215 -QGIATEDEYPYQAVP---GTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVC 289 (348)
Q Consensus 215 -~Gi~~e~~yPY~~~~---~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~ 289 (348)
+|+++|++|||.... +.|.........++.+|..++ .++++||++|+ +|||++++++. +|+.|++|||....
T Consensus 80 ~gGi~~e~~yPY~~~~~~~~~C~~~~~~~~~~i~~~~~v~-~~~~~ik~~l~~~gPV~v~~~~~--~f~~Y~~Giy~~~~ 156 (215)
T 3i06_A 80 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELP-QDEAQIAAWLAVNGPVAVAVDAS--SWMTYTGGVMTSCV 156 (215)
T ss_dssp TTEEEC-CCSCCCCTTSCCCCCCCSSCCEEEEEEEEEECC-SCHHHHHHHHHHHCCEEEEECCT--TGGGCCSSEECSCC
T ss_pred cccccccCccCCcCCCCCCCccccCCcccceEecceEEeC-ChHHHHHHHHHHCCCEEEEEEch--HHhcCCCCcccCCC
Confidence 479999999999754 378876555667899999998 48999999997 79999999984 89999999998644
Q ss_pred CCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeeeeC
Q 018958 290 GTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA 348 (348)
Q Consensus 290 ~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~~ 348 (348)
...++|||+|||||++ ++++|||||||||++||++|||||+|+.|+|||++.++||++
T Consensus 157 ~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 157 SEQLDHGVLLVGYNDS-AAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp CSCCCEEEEEEEEESS-SSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEE
T ss_pred CCccCcEEEEEEEecc-CCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEec
Confidence 5678999999999987 889999999999999999999999999999999999999975
No 30
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=1.2e-64 Score=453.48 Aligned_cols=206 Identities=50% Similarity=1.002 Sum_probs=193.1
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~- 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER-RSHGCDGGYQTTSLQYVVDN- 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh-
Confidence 6999999999999999999999999999999999999999999999999999999997 37899999999999999988
Q ss_pred CccCCCCCCCCCCCCCCCCCCC-CcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCCC
Q 018958 216 GIATEDEYPYQAVPGTCSAAQK-PAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~~~-~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|..... ...+++.+|..++..++++||++|++|||+++|++..++|+.|++|||..+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (214)
T 2bdz_A 79 GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTD 158 (214)
T ss_dssp CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCCC
Confidence 9999999999998889987643 457889999999878899999999899999999998679999999999998888899
Q ss_pred eEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 295 HAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
|||+|||||+ +|||||||||++||++|||||+|+. |+|||++.++||++
T Consensus 159 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 159 HAVTAVGYGK-----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp EEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred eEEEEEEcCC-----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 9999999997 6999999999999999999999995 89999999999985
No 31
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1e-64 Score=453.87 Aligned_cols=206 Identities=50% Similarity=0.974 Sum_probs=192.5
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcC
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+||||||||.||||||||+++++|+++++++++.++||||+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER-RSYGCRGGFPLYALQYVANS- 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 7999999999999999999999999999999999999999999999999999999998 48899999999999999988
Q ss_pred CccCCCCCCCCCCCCCCCCC-CCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCCC
Q 018958 216 GIATEDEYPYQAVPGTCSAA-QKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|... .....+++.+|..++..+++.+++++++|||++++++..++|+.|++|||..+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 158 (213)
T 3ioq_A 79 GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSID 158 (213)
T ss_dssp CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCccC
Confidence 99999999999999999874 34567889999999877788888888899999999997679999999999998888899
Q ss_pred eEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 295 HAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
|||+|||||+ +|||||||||++|||+|||||+|+. |+|||++.++||++
T Consensus 159 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 159 HAVAAVGYGN-----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp EEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred ceEEEEecCC-----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 9999999986 6999999999999999999999996 89999999999985
No 32
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.7e-64 Score=461.51 Aligned_cols=210 Identities=41% Similarity=0.882 Sum_probs=195.0
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHc
Q 018958 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD-ESEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSBTTTBCCHHHHHHHHHHT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986 47899999999999999987
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCcceeecce---EecCCccHHHHHHHHHc----CCeEEEEEecchhhccccCceEeC
Q 018958 215 QGIATEDEYPYQAVPGTCSAAQKPAAAKISNY---EEVPSGDEQALLKAVSM----QPVSIAIAAYSTEFQSYKEGIFNG 287 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y---~~~~~~~~~~ik~al~~----gPV~v~~~~~~~~f~~y~~Giy~~ 287 (348)
.|+++|++|||.+..+.|........+++.+| ..++..++++||++|++ |||+++|++ ++|+.|++|||..
T Consensus 80 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~~ 157 (246)
T 2b1m_A 80 GGIASEADYPYKARDGKCKANEIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYDG 157 (246)
T ss_dssp TCBCBTTTSCCCSSCCCCCGGGCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEECC
T ss_pred CCcCccccccccCCCCcCcCCCCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeecC
Confidence 79999999999999999987655567789999 88887789999999986 999999999 5899999999998
Q ss_pred -CCCCC--CCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCC----CcccccCceeeeeC
Q 018958 288 -VCGTQ--LDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDE----GLCGIGTRSSYPLA 348 (348)
Q Consensus 288 -~~~~~--~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 348 (348)
.|+.. ++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 158 ~~c~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 158 GNCSSPYGINHFVLIVGYGSE-DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp TTCCSSCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred CCCCCCCcCceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 48765 8999999999998 8999999999999999999999999997 99999999999975
No 33
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=1.4e-64 Score=461.01 Aligned_cols=210 Identities=44% Similarity=0.852 Sum_probs=195.4
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHc
Q 018958 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||+.|+|+||||||.||||||||++++||++++++++..++||||+|++|+.. +.||+||++..|++|+.++
T Consensus 17 ~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~-~~gC~GG~~~~a~~yi~~~ 95 (241)
T 2oul_A 17 FDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK-NYGCNGGLINNAFEDMIEL 95 (241)
T ss_dssp CCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT-SCTTBCBCHHHHHHHHHHT
T ss_pred cCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC-CCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999999999999999974 7899999999999999986
Q ss_pred CCccCCCCCCCCCCCCC-CCCCCCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCC
Q 018958 215 QGIATEDEYPYQAVPGT-CSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQL 293 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 293 (348)
.|+++|++|||.+..+. |+.......+++.+|..++..++++||++| |||+++|++. ++|+.|++|||+..|+..+
T Consensus 96 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~~~ 172 (241)
T 2oul_A 96 GGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECGDQL 172 (241)
T ss_dssp TSBCBTTSSCCCTTSCCCCCTTSSSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBCSSC
T ss_pred CCcCccccCCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCCCCC
Confidence 69999999999998888 987655667899999999877899999999 9999999997 7999999999998887669
Q ss_pred CeEEEEEEEeecC---------CCccEEEEEcCCCCCCCCCceEEEEcCCCc----ccccCceeeeeC
Q 018958 294 DHAVTIVGFGTTE---------DGANYWLIKNSWGNTWGDAGYMKIVRDEGL----CGIGTRSSYPLA 348 (348)
Q Consensus 294 ~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----Cgi~~~~~~p~~ 348 (348)
+|||+|||||++. .|++|||||||||++||++|||||+|+.|. |||++.++||++
T Consensus 173 ~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 173 NHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp CEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 9999999999873 278999999999999999999999999766 999999999985
No 34
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1.8e-64 Score=460.88 Aligned_cols=210 Identities=40% Similarity=0.811 Sum_probs=195.1
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHc
Q 018958 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||+.|+++||||||.||||||||++++||++++++++..++||+|+|++|+.. +.||+||++..|++|+.++
T Consensus 19 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~-~~gC~GG~~~~a~~y~~~~ 97 (243)
T 3bwk_A 19 LDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK-NNGCYGGYITNAFDDMIDL 97 (243)
T ss_dssp CCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT-SCGGGCCCHHHHHHHHHHT
T ss_pred cCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC-CCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999999999999999974 7899999999999999986
Q ss_pred CCccCCCCCCCCCCCCC-CCCCCCCcceeecceEecCCccHHHHHHHHHcCCeEEEEEecchhhccccCceEeCCCCCCC
Q 018958 215 QGIATEDEYPYQAVPGT-CSAAQKPAAAKISNYEEVPSGDEQALLKAVSMQPVSIAIAAYSTEFQSYKEGIFNGVCGTQL 293 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 293 (348)
.|+++|++|||.+..+. |+.......+++.+|..++..++++||++| |||+++|++. ++|+.|++|||...|+..+
T Consensus 98 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~~~ 174 (243)
T 3bwk_A 98 GGLCSQDDYPYVSNLPETCNLKRCNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGECGAAP 174 (243)
T ss_dssp TSBCBTTTSCCCTTSCCCCCGGGCSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCCCSSC
T ss_pred CCcccccccCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCCCCcC
Confidence 69999999999998888 987655567889999999877899999999 9999999997 7999999999988887669
Q ss_pred CeEEEEEEEeecC---------CCccEEEEEcCCCCCCCCCceEEEEcCCCc----ccccCceeeeeC
Q 018958 294 DHAVTIVGFGTTE---------DGANYWLIKNSWGNTWGDAGYMKIVRDEGL----CGIGTRSSYPLA 348 (348)
Q Consensus 294 ~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----Cgi~~~~~~p~~ 348 (348)
+|||+|||||++. .|++|||||||||++||++|||||+|+.|. |||++.++||++
T Consensus 175 ~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 175 NHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp CEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 9999999999873 278999999999999999999999999766 999999999985
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.2e-64 Score=456.38 Aligned_cols=210 Identities=30% Similarity=0.566 Sum_probs=194.2
Q ss_pred CCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHH
Q 018958 134 TDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQ 213 (348)
Q Consensus 134 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~ 213 (348)
++||++||||+.|+|+||||||.||||||||+++++|+++++++++.++||||+|++|.. +.||+||++..|++|+++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~ 85 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYIQH 85 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHHHHHHHHH
Confidence 379999999999999999999999999999999999999999999999999999999997 689999999999999998
Q ss_pred cCCccCCCCCCCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHHc--CCeEEEEEec-chhhccccCceEeCC-C
Q 018958 214 NQGIATEDEYPYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVSM--QPVSIAIAAY-STEFQSYKEGIFNGV-C 289 (348)
Q Consensus 214 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~~--gPV~v~~~~~-~~~f~~y~~Giy~~~-~ 289 (348)
+ |+++|++|||.+..+.|. ......+++.+|..++..++++||++|++ |||++++.+. .++|+.|++||+... |
T Consensus 86 ~-Gi~~e~~yPY~~~~~~C~-~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~ 163 (222)
T 3f5v_A 86 N-GVVQESYYRYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDN 163 (222)
T ss_dssp H-CEEBGGGSCCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCC
T ss_pred c-CCCchhhCCCcccCCCcc-CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCC
Confidence 6 999999999999989998 44566789999999977899999999974 9999999984 268999999987553 3
Q ss_pred -CCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeeeeC
Q 018958 290 -GTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYPLA 348 (348)
Q Consensus 290 -~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~~ 348 (348)
...++|||+|||||++ +|++|||||||||++||++|||||+|+.|.|||++.++||+|
T Consensus 164 ~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 164 GYQPNYHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 222 (222)
T ss_dssp SSSCEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEC
T ss_pred CCCccCcEEEEEEEecc-CCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEeC
Confidence 4678999999999997 899999999999999999999999999999999999999986
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=7.8e-60 Score=435.84 Aligned_cols=208 Identities=30% Similarity=0.662 Sum_probs=178.6
Q ss_pred CCCCceecccC----CCCCcccCCCCCcchHHHHHHHHHHHHHHHhcC--CcccCCHHHHhhhcCC-CCCCCCCCChHHH
Q 018958 135 DVPTSLDWRDK----GAVTPIKNQKECGCCWAFAAVAAVEGITKIRSG--NLIQLSEQQLLDCSTN-GNNGCLGGSREKA 207 (348)
Q Consensus 135 ~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~--~~~~LS~q~l~dc~~~-~~~gc~GG~~~~a 207 (348)
+||++||||+. +.|+||||||.||||||||++++||++++++++ ..++||+|+|+||+.. .+.||+||++..|
T Consensus 6 ~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a 85 (266)
T 3cbj_A 6 KLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEA 85 (266)
T ss_dssp CCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHHH
T ss_pred CCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHHH
Confidence 79999999986 789999999999999999999999999999875 4789999999999863 3689999999999
Q ss_pred HHHHHHcCCccC-------CCCCCCC---------CCCCCCCCC---------C----C-----CcceeecceEecCCcc
Q 018958 208 FAYIIQNQGIAT-------EDEYPYQ---------AVPGTCSAA---------Q----K-----PAAAKISNYEEVPSGD 253 (348)
Q Consensus 208 ~~~~~~~~Gi~~-------e~~yPY~---------~~~~~C~~~---------~----~-----~~~~~i~~y~~~~~~~ 253 (348)
++|+.++ |+++ |++|||. +..+.|... . . ...+.+ .+..++ .+
T Consensus 86 ~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~-~~~~v~-~~ 162 (266)
T 3cbj_A 86 WNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGY-NSYSVS-NS 162 (266)
T ss_dssp HHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBS-CCEECC-SC
T ss_pred HHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeee-eeEEeC-CC
Confidence 9999986 9999 9999998 334556421 0 0 001122 334565 58
Q ss_pred HHHHHHHHH-cCCeEEEEEecchhhccccCceEeCCCCC-CCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEE
Q 018958 254 EQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVCGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIV 331 (348)
Q Consensus 254 ~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~ 331 (348)
+++||++|. +|||+++|++. ++|+.|++|||.++|+. .++|||+|||||++ +|++|||||||||++|||+|||||+
T Consensus 163 ~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~ 240 (266)
T 3cbj_A 163 EKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKIL 240 (266)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEeccc-CCceEEEEEcCCCCccCCCCEEEEE
Confidence 999999997 79999999998 69999999999987664 45999999999997 8999999999999999999999999
Q ss_pred cCCCcccccCceeeee
Q 018958 332 RDEGLCGIGTRSSYPL 347 (348)
Q Consensus 332 ~~~~~Cgi~~~~~~p~ 347 (348)
|+.|.|||++.+++++
T Consensus 241 rg~n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 241 RGQDHCGIESEVVAGI 256 (266)
T ss_dssp CSSCGGGTTTSCEECC
T ss_pred cCCCcccccCceEEEE
Confidence 9999999999999875
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=2e-59 Score=430.40 Aligned_cols=209 Identities=35% Similarity=0.705 Sum_probs=177.5
Q ss_pred CCCCceecccC----CCCCcccCCCCCcchHHHHHHHHHHHHHHHhcC--CcccCCHHHHhhhcCCCCCCCCCCChHHHH
Q 018958 135 DVPTSLDWRDK----GAVTPIKNQKECGCCWAFAAVAAVEGITKIRSG--NLIQLSEQQLLDCSTNGNNGCLGGSREKAF 208 (348)
Q Consensus 135 ~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~--~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~ 208 (348)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||||+|+||+...+.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 68999999997 689999999999999999999999999999976 678999999999987556899999999999
Q ss_pred HHHHHcCCccCCCCC-------CCC---------CCCCCCCCC----------C----CCccee----ecceEecCCccH
Q 018958 209 AYIIQNQGIATEDEY-------PYQ---------AVPGTCSAA----------Q----KPAAAK----ISNYEEVPSGDE 254 (348)
Q Consensus 209 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~C~~~----------~----~~~~~~----i~~y~~~~~~~~ 254 (348)
+|++++ |+++|++| ||. +..+.|... . .....+ ......++ .++
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-NDE 159 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SCH
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-CcH
Confidence 999987 99999888 997 334455321 0 000000 11122444 589
Q ss_pred HHHHHHHH-cCCeEEEEEecchhhccccCceEeCCCCC-CCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEc
Q 018958 255 QALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVCGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVR 332 (348)
Q Consensus 255 ~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 332 (348)
++||++|+ +|||+++|++. ++|+.|++|||..++.. .++|||+|||||++ ++++|||||||||++||++|||||+|
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~r 237 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVE-NKAPYWLIANSWNEDWGENGYFRIVR 237 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeec-CCeeEEEEEeCCCCCcccCCeEEEEc
Confidence 99999997 79999999997 79999999999987554 46999999999997 89999999999999999999999999
Q ss_pred CCCcccccCceeeee
Q 018958 333 DEGLCGIGTRSSYPL 347 (348)
Q Consensus 333 ~~~~Cgi~~~~~~p~ 347 (348)
+.|+|||++.++..+
T Consensus 238 g~n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 238 GRDECSIESEVTAGR 252 (254)
T ss_dssp SSCGGGTTSSEEEEE
T ss_pred CCCeecCCCceEeec
Confidence 999999999988654
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=2e-59 Score=434.93 Aligned_cols=207 Identities=29% Similarity=0.633 Sum_probs=185.0
Q ss_pred CCCCCceecccC---CCCCcccCCC---CCcchHHHHHHHHHHHHHHHhcC-C--cccCCHHHHhhhcCCCCCCCCCCCh
Q 018958 134 TDVPTSLDWRDK---GAVTPIKNQK---ECGCCWAFAAVAAVEGITKIRSG-N--LIQLSEQQLLDCSTNGNNGCLGGSR 204 (348)
Q Consensus 134 ~~lP~~~Dwr~~---g~v~pV~dQg---~cGsCwAfA~~~~lE~~~~~~~~-~--~~~LS~q~l~dc~~~~~~gc~GG~~ 204 (348)
.+||++||||+. ++|+|||||| .||||||||++++||++++++++ . .++||+|+|+||+. ..||+||++
T Consensus 34 ~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~~gC~GG~~ 111 (277)
T 1deu_A 34 ADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--AGSCEGGND 111 (277)
T ss_dssp GGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--SEETBEECH
T ss_pred ccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--CCCCCCCCH
Confidence 479999999998 6899999999 99999999999999999999875 3 47899999999986 379999999
Q ss_pred HHHHHHHHHcCCccCCCCCCCCCCCCCCCCC---------------CCCcceeecceEecCCccHHHHHHHHH-cCCeEE
Q 018958 205 EKAFAYIIQNQGIATEDEYPYQAVPGTCSAA---------------QKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSI 268 (348)
Q Consensus 205 ~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~---------------~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v 268 (348)
..|++|+.++ |+++|++|||.+..+.|... .....+++.+|..++ ++++||++|. +|||++
T Consensus 112 ~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV~v 188 (277)
T 1deu_A 112 LSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPISC 188 (277)
T ss_dssp HHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCEEE
Confidence 9999999886 99999999999988888731 112346777888876 5888999987 799999
Q ss_pred EEEecchhhccccCceEeCC-CCCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEcCCC--------cccc
Q 018958 269 AIAAYSTEFQSYKEGIFNGV-CGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEG--------LCGI 339 (348)
Q Consensus 269 ~~~~~~~~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~--------~Cgi 339 (348)
+|++. ++|+.|++|||..+ +...++|||+|||||++ +|++|||||||||++|||+|||||+|+.| .|||
T Consensus 189 ~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cgI 266 (277)
T 1deu_A 189 GIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAI 266 (277)
T ss_dssp EECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTTT
T ss_pred EEecc-cccccCcCcEECCCCCCCcCCeEEEEEEeccc-CCccEEEEEeCCCCccCCCcEEEEEcCCCccccccccccee
Confidence 99998 79999999999987 45678999999999998 89999999999999999999999999988 9999
Q ss_pred cCceeeee
Q 018958 340 GTRSSYPL 347 (348)
Q Consensus 340 ~~~~~~p~ 347 (348)
++.++|++
T Consensus 267 e~~~~~~~ 274 (277)
T 1deu_A 267 EEHCTFGD 274 (277)
T ss_dssp TSCEEEEE
T ss_pred ccccEeec
Confidence 99999875
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=9.2e-54 Score=395.26 Aligned_cols=206 Identities=26% Similarity=0.514 Sum_probs=165.5
Q ss_pred CceecccC-CCCC--cccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCC-CCCCCCCCChHH-HHHHHH
Q 018958 138 TSLDWRDK-GAVT--PIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-GNNGCLGGSREK-AFAYII 212 (348)
Q Consensus 138 ~~~Dwr~~-g~v~--pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~-~~~gc~GG~~~~-a~~~~~ 212 (348)
...|||+. |+++ ||||||.||||||||++++||++++++++.+++||||+|+||+.. ++.||+||.... ++.++.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 46899999 6887 999999999999999999999999999999999999999999864 478999997554 557777
Q ss_pred HcCCccCCCCCCCCCC--CCCCCCCCC-----------------CcceeecceEecCCc----c----HHHHHHHHH-cC
Q 018958 213 QNQGIATEDEYPYQAV--PGTCSAAQK-----------------PAAAKISNYEEVPSG----D----EQALLKAVS-MQ 264 (348)
Q Consensus 213 ~~~Gi~~e~~yPY~~~--~~~C~~~~~-----------------~~~~~i~~y~~~~~~----~----~~~ik~al~-~g 264 (348)
+++|+++|++|||... .+.|+.... +...++.+|..++.. + +++||++|+ +|
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 7745999999999863 467875321 224567788777642 3 478999998 79
Q ss_pred CeEEEEEecchhhcccc-CceE-eCCCCC-CCCeEEEEEEEeec--CCC--ccEEEEEcCCCCCCCCCceEEEEcC-CCc
Q 018958 265 PVSIAIAAYSTEFQSYK-EGIF-NGVCGT-QLDHAVTIVGFGTT--EDG--ANYWLIKNSWGNTWGDAGYMKIVRD-EGL 336 (348)
Q Consensus 265 PV~v~~~~~~~~f~~y~-~Giy-~~~~~~-~~~Hav~iVGyg~~--~~g--~~ywivkNSWG~~WG~~Gy~~i~~~-~~~ 336 (348)
||+++|++. +|+.|+ +|++ ...|+. .++|||+|||||++ ++| ++|||||||||++|||+|||||+|+ .|+
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~n~ 246 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTH 246 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCCTT
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCCCc
Confidence 999999875 577774 4433 334764 68999999999985 355 6899999999999999999999974 789
Q ss_pred ccccCceee
Q 018958 337 CGIGTRSSY 345 (348)
Q Consensus 337 Cgi~~~~~~ 345 (348)
|||+..+.+
T Consensus 247 Cgi~~~~~~ 255 (265)
T 2wbf_X 247 CHFNFIHSV 255 (265)
T ss_dssp CSSCSCCEE
T ss_pred cCcceeEEE
Confidence 996654443
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=2.1e-52 Score=390.78 Aligned_cols=232 Identities=20% Similarity=0.284 Sum_probs=178.5
Q ss_pred ceEEEcccCCCCCHHHHHHHHcccCCCCCCCCCCCCccccccCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHH
Q 018958 88 TYKLGTNQFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVA 167 (348)
Q Consensus 88 s~~~g~N~FsD~t~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~ 167 (348)
...-..|++.++..|.++.. +|..++.+..+.. .+........+||++||||+.+ ||||||.||||||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd~---~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~ 85 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSG-YGYIPDIADIRDF---SYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAA 85 (291)
T ss_dssp ----------CCCCCCCCTT-CCEECCCCCTTCC---BCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHH
T ss_pred CcccchhhHhHhhhcccccc-CCCCCCCCccccc---ccCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHH
Confidence 34456789999999988754 5777766543321 1111001013799999999984 999999999999999999
Q ss_pred HHHHHHHHhcCCcccCCHHHHh--hhcCC--CC-CCCCCCChHHHHHHHHHcCCccCCCCCCCCCCC---CCCCCC----
Q 018958 168 AVEGITKIRSGNLIQLSEQQLL--DCSTN--GN-NGCLGGSREKAFAYIIQNQGIATEDEYPYQAVP---GTCSAA---- 235 (348)
Q Consensus 168 ~lE~~~~~~~~~~~~LS~q~l~--dc~~~--~~-~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~C~~~---- 235 (348)
++|++++ +++..+.||+|+|+ +|... ++ .+|.||++..|++|+.++ |+++|++|||.+.+ +.|...
T Consensus 86 alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~ 163 (291)
T 3ois_A 86 AIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAP 163 (291)
T ss_dssp HHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCG
T ss_pred HHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCcccccccccccccc
Confidence 9999876 46677899999998 67632 23 468899999999999987 99999999999873 356441
Q ss_pred ----------CCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccC--ceEeCC-CCC--CCCeEEEE
Q 018958 236 ----------QKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKE--GIFNGV-CGT--QLDHAVTI 299 (348)
Q Consensus 236 ----------~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~--Giy~~~-~~~--~~~Hav~i 299 (348)
.....+++.+|..++. ++++|+++|+ .|||+++|+++ ++|+.|++ |||..+ |.. .++|||+|
T Consensus 164 ~~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~i 241 (291)
T 3ois_A 164 ASKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLC 241 (291)
T ss_dssp GGSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEE
T ss_pred ccCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEE
Confidence 1124568899999985 8999999998 68999999998 79999998 999887 432 35999999
Q ss_pred EEEeecCCCccEEEEEcCCCCCCCCCceEEEEcC
Q 018958 300 VGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVRD 333 (348)
Q Consensus 300 VGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 333 (348)
|||| ++++|||||||||++||++|||||+|+
T Consensus 242 VGy~---~~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 242 VGYD---DEIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp EEEE---TTTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred EEEe---CCCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 9997 357899999999999999999999998
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.1e-41 Score=330.95 Aligned_cols=196 Identities=18% Similarity=0.325 Sum_probs=154.1
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHh-cCCcccCCH----------------HHHhhhcCC---
Q 018958 135 DVPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIR-SGNLIQLSE----------------QQLLDCSTN--- 194 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~-~~~~~~LS~----------------q~l~dc~~~--- 194 (348)
..|..|+++....+|||+|||+||+|||||+++++|+.++++ +++.++||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 457788888888899999999999999999999999999998 578899999 999999742
Q ss_pred ----------CCCCCCCCChHHHHHHHHHcCCccCCCCCCCCCCC---------------------------C------C
Q 018958 195 ----------GNNGCLGGSREKAFAYIIQNQGIATEDEYPYQAVP---------------------------G------T 231 (348)
Q Consensus 195 ----------~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 231 (348)
++.||+||....++.++.+ +|++++++|||+... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~k-yGl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEK-YGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHH-cCccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 3689999999999999986 599999999998631 1 1
Q ss_pred ----------------C----------CCCC-----------CC-------cce--eecceEec----------------
Q 018958 232 ----------------C----------SAAQ-----------KP-------AAA--KISNYEEV---------------- 249 (348)
Q Consensus 232 ----------------C----------~~~~-----------~~-------~~~--~i~~y~~~---------------- 249 (348)
| .... ++ ... .+.+|..+
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 1100 00 111 44555533
Q ss_pred -----------------CCccH-HHHHHHHH-cCCeEEEEEecchhhccccCceEeCC-C--------------------
Q 018958 250 -----------------PSGDE-QALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGV-C-------------------- 289 (348)
Q Consensus 250 -----------------~~~~~-~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~-~-------------------- 289 (348)
|..+. +.++.+|+ .|||.+++++.. +.++++|||+.+ |
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 21111 34456777 589999999983 455699999876 3
Q ss_pred --CCCCCeEEEEEEEe--ecCCCc-cEEEEEcCCCCCCCCCceEEEEcC
Q 018958 290 --GTQLDHAVTIVGFG--TTEDGA-NYWLIKNSWGNTWGDAGYMKIVRD 333 (348)
Q Consensus 290 --~~~~~Hav~iVGyg--~~~~g~-~ywivkNSWG~~WG~~Gy~~i~~~ 333 (348)
.+..+|||+||||| .+.+|+ +|||||||||++||++|||+|+++
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 23579999999999 655788 999999999999999999999986
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=3.5e-40 Score=320.76 Aligned_cols=204 Identities=19% Similarity=0.252 Sum_probs=143.6
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHh-cCCcccCCH----------------HHHhhhcCC----
Q 018958 136 VPTSLDWRDKGAVTPIKNQKECGCCWAFAAVAAVEGITKIR-SGNLIQLSE----------------QQLLDCSTN---- 194 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~-~~~~~~LS~----------------q~l~dc~~~---- 194 (348)
.|..|+++..+.+|||||||+||+|||||+++++|+.++++ +++.++||+ |+|+||+..
T Consensus 53 ~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~ 132 (457)
T 2e01_A 53 DNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDS 132 (457)
T ss_dssp CCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred CCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccc
Confidence 46678888888899999999999999999999999999998 788999999 788999752
Q ss_pred -------CCCCCCCCChHHHHHHHHHcCCccCCCCCCC-CCC---------------------------------C----
Q 018958 195 -------GNNGCLGGSREKAFAYIIQNQGIATEDEYPY-QAV---------------------------------P---- 229 (348)
Q Consensus 195 -------~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~---- 229 (348)
.+.||+||....++.++.+. |+++|++||| +.. .
T Consensus 133 r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~~ 211 (457)
T 2e01_A 133 RLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVT 211 (457)
T ss_dssp HHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHH
T ss_pred hhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHHH
Confidence 36899999999999999775 9999999999 310 0
Q ss_pred -----------------CCCCC----C------C----------CC-------cceeecc--------------------
Q 018958 230 -----------------GTCSA----A------Q----------KP-------AAAKISN-------------------- 245 (348)
Q Consensus 230 -----------------~~C~~----~------~----------~~-------~~~~i~~-------------------- 245 (348)
+.|.. . . .+ ....+.+
T Consensus 212 ~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve~ 291 (457)
T 2e01_A 212 LREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKIDR 291 (457)
T ss_dssp HHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEec
Confidence 01111 0 0 00 0001111
Q ss_pred -----------eEecCCcc-HHHHHHHHH-cCCeEEEEEecchhhccccCceEeCCC---------------------CC
Q 018958 246 -----------YEEVPSGD-EQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVC---------------------GT 291 (348)
Q Consensus 246 -----------y~~~~~~~-~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~---------------------~~ 291 (348)
|..+|... .+.++.+|+ .|||.+++++. .|.+|++|||+..| .+
T Consensus 292 ~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s 369 (457)
T 2e01_A 292 LGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHES 369 (457)
T ss_dssp CCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSC
T ss_pred cCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCCC
Confidence 33333211 144456677 68999999998 48888999998664 24
Q ss_pred CCCeEEEEEEEeecCCCc--cEEEEEcCCCCCCCCCceEEEEcCCCcccccCceeee
Q 018958 292 QLDHAVTIVGFGTTEDGA--NYWLIKNSWGNTWGDAGYMKIVRDEGLCGIGTRSSYP 346 (348)
Q Consensus 292 ~~~Hav~iVGyg~~~~g~--~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p 346 (348)
..+|||+|||||.+.+|+ +|||||||||++||++|||+|+++ .+...++++
T Consensus 370 ~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~----wf~ey~~~i 422 (457)
T 2e01_A 370 LMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK----YFEEYCFQI 422 (457)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH----HHHHHEEEE
T ss_pred CCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh----hHhhccEEE
Confidence 579999999999876788 899999999999999999999986 444444443
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=1.1e-34 Score=276.27 Aligned_cols=184 Identities=22% Similarity=0.317 Sum_probs=136.3
Q ss_pred CCCcccCCCCCcchHHHHHHHHHHHHHHHhcCCcccCCHHHHhhhcCC-----------CCCCCCCCChHHHHHHHHHcC
Q 018958 147 AVTPIKNQKECGCCWAFAAVAAVEGITKIRSGNLIQLSEQQLLDCSTN-----------GNNGCLGGSREKAFAYIIQNQ 215 (348)
Q Consensus 147 ~v~pV~dQg~cGsCwAfA~~~~lE~~~~~~~~~~~~LS~q~l~dc~~~-----------~~~gc~GG~~~~a~~~~~~~~ 215 (348)
.++||||||+||+|||||+++++|+.+++++++.++||+|+|++|+.. .+.||+||....|+.|+.++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 389999999999999999999999999999999999999999999741 25799999999999999886
Q ss_pred CccCCCCCC------CCCCC-----------------C-CCCC------C---------------CCC------------
Q 018958 216 GIATEDEYP------YQAVP-----------------G-TCSA------A---------------QKP------------ 238 (348)
Q Consensus 216 Gi~~e~~yP------Y~~~~-----------------~-~C~~------~---------------~~~------------ 238 (348)
|++++++|| +.... . .-.. . ..+
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 22100 0 0000 0 000
Q ss_pred -------cceeecceEecCC-------------------------ccHHHHHHH----HHcC-CeEEEEEecchhhcccc
Q 018958 239 -------AAAKISNYEEVPS-------------------------GDEQALLKA----VSMQ-PVSIAIAAYSTEFQSYK 281 (348)
Q Consensus 239 -------~~~~i~~y~~~~~-------------------------~~~~~ik~a----l~~g-PV~v~~~~~~~~f~~y~ 281 (348)
......+|..+.. -..+.|+++ |..| ||-.+-++....|. +
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~--~ 257 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT--R 257 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC--T
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC--C
Confidence 0001223332210 014555554 4555 99999999844455 8
Q ss_pred CceEeCC--C---------------------------------------------CCCCCeEEEEEEEeecCCCccEEEE
Q 018958 282 EGIFNGV--C---------------------------------------------GTQLDHAVTIVGFGTTEDGANYWLI 314 (348)
Q Consensus 282 ~Giy~~~--~---------------------------------------------~~~~~Hav~iVGyg~~~~g~~ywiv 314 (348)
.||...+ . .+..+|||+|||||.+++|++||+|
T Consensus 258 ~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw~v 337 (383)
T 3pw3_A 258 DGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMV 337 (383)
T ss_dssp TSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEEEE
T ss_pred CceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEEEE
Confidence 8887321 0 1234799999999987689999999
Q ss_pred EcCCCCCCCCCceEEEEcC
Q 018958 315 KNSWGNTWGDAGYMKIVRD 333 (348)
Q Consensus 315 kNSWG~~WG~~Gy~~i~~~ 333 (348)
|||||++||++|||+|+++
T Consensus 338 kNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 338 KNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp ECSBCSCSTTTTEEEEEHH
T ss_pred EeCCCCCCCcCCeEEecHH
Confidence 9999999999999999986
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.79 E-value=2.2e-19 Score=141.11 Aligned_cols=75 Identities=39% Similarity=0.629 Sum_probs=69.3
Q ss_pred CchhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHHHHHcccCCC
Q 018958 39 HEQSVVEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKEGNRTYKLGTNQFSDLTNDEFRALYTGYKMP 114 (348)
Q Consensus 39 ~~~~~~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~~s~~~g~N~FsD~t~eE~~~~~~~~~~~ 114 (348)
++..+..+|++|+++|+|.|.+.+|+..|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++.++|.+.+
T Consensus 17 ~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 17 KEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred CcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 5678899999999999999999899999999999999999999997 58999999999999999999998887654
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.74 E-value=1.7e-18 Score=130.00 Aligned_cols=68 Identities=32% Similarity=0.539 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHHHHHcccCC
Q 018958 44 VEIHEKWMAQHGRSYKDELEKEMRLKIFKENLEYIEKANKE---GNRTYKLGTNQFSDLTNDEFRALYTGYKM 113 (348)
Q Consensus 44 ~~~f~~f~~~~~k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~---~~~s~~~g~N~FsD~t~eE~~~~~~~~~~ 113 (348)
+..|++|+.+|+|.|.+.+|+..| .||.+|++.|++||++ +..+|++|+|+|+|||.+|| +.++|.+.
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 357999999999999888899999 9999999999999985 35789999999999999999 88887643
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.09 E-value=0.0061 Score=51.01 Aligned_cols=131 Identities=16% Similarity=0.166 Sum_probs=87.4
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHh--------cCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcCCccCCCCC
Q 018958 152 KNQKECGCCWAFAAVAAVEGITKIR--------SGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEY 223 (348)
Q Consensus 152 ~dQg~cGsCwAfA~~~~lE~~~~~~--------~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y 223 (348)
..||.-+=|-+|+.+++|-+..... ..-.+.+|+++|.++ |..+...++|.... |-.+
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t---------~~~~~q~Iky~~s~-G~~~---- 90 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQ-GRDI---- 90 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC---------CBCHHHHHHHHHHT-TCCC----
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHc-CcCh----
Confidence 3599999999999999987654211 112356777777663 45778888888753 4221
Q ss_pred CCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCCCCCCCCeEEEEEEE
Q 018958 224 PYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGF 302 (348)
Q Consensus 224 PY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGy 302 (348)
.+ .... -+.+++++.+. +.|+.+...-. +........+||++||||
T Consensus 91 ----------------~~----~nr~--ls~neV~~~i~~Nk~I~v~~~~v-----------~e~~~~~~~gHA~av~Gy 137 (183)
T 1pxv_A 91 ----------------HY----QEGV--PSYNQVDQLTKDNVGIMILAQSV-----------SQNPNDPHLGHALAVVGN 137 (183)
T ss_dssp ----------------EE----EESC--CCHHHHHHHHHTTCCEEEEEECC-----------CSSTTSCCCEEEEEEEEE
T ss_pred ----------------hH----hcCC--CCHHHHHHHHhcCCcEEEEcccc-----------ccCCCCccCceeEEEEee
Confidence 01 0112 26788999997 67888776432 112233467899999999
Q ss_pred eecCCCccEEEEEcCCCCCCCCCceEEEEcCCC
Q 018958 303 GTTEDGANYWLIKNSWGNTWGDAGYMKIVRDEG 335 (348)
Q Consensus 303 g~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~ 335 (348)
-.- ++.++.+|=|=|-. |++-++.+.+
T Consensus 138 a~~-~~~~~y~~WNPW~~-----~~~~~~a~S~ 164 (183)
T 1pxv_A 138 AKI-NDQEKLIYWNPWDT-----ELSIQDADSS 164 (183)
T ss_dssp EEE-TTEEEEEEECTTCS-----SCEEEETTCC
T ss_pred eec-CCCeEEEEeCCccC-----CcEeecCCCC
Confidence 986 58899999888854 6777765533
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.06 E-value=0.015 Score=48.53 Aligned_cols=121 Identities=16% Similarity=0.196 Sum_probs=81.7
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHh--------cCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcCCccCCCCC
Q 018958 152 KNQKECGCCWAFAAVAAVEGITKIR--------SGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEY 223 (348)
Q Consensus 152 ~dQg~cGsCwAfA~~~~lE~~~~~~--------~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y 223 (348)
..||.-+=|-+|+.+++|-+..... ..-...+|+++|..+. ..+...++|+.+. |--.
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~---------~t~~e~iky~~s~-g~~~---- 81 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG---------LTPREMIYFGQTQ-GRSP---- 81 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC---------CCHHHHHHHHHHT-TCCC----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC---------CCHHHHHHHHHHc-CCCh----
Confidence 3599999999999999987654211 1124679999998543 4677888887765 3210
Q ss_pred CCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCCCCCCCCeEEEEEEE
Q 018958 224 PYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGF 302 (348)
Q Consensus 224 PY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGy 302 (348)
.+ .... -+.+++++.+. +.|+.|..+-. + . +.+...+||++||||
T Consensus 82 ------------------~~--~n~~--ls~~eV~~~~~~nk~i~i~~~~v-e----~-------~~~~~~gHAlav~Gy 127 (174)
T 1cv8_A 82 ------------------QL--LNRM--TTYNEVDNLTKNNKGIAILGSRV-E----S-------RNGMHAGHAMAVVGN 127 (174)
T ss_dssp ------------------EE--ESSC--CCHHHHHHHHHTTCCEEEEEEES-S----C-------BTTBCCEEEEEEEEE
T ss_pred ------------------hh--hcCC--CCHHHHHHHHhcCCceEEEcccc-c----C-------CCCCCCceeEEEEee
Confidence 00 0011 25678889887 56887766543 1 1 112356899999999
Q ss_pred eecCCCccEEEEEcCCCC
Q 018958 303 GTTEDGANYWLIKNSWGN 320 (348)
Q Consensus 303 g~~~~g~~ywivkNSWG~ 320 (348)
-.-.+|.+|.++=|=|-.
T Consensus 128 ~~~~ng~~~y~~WNPW~~ 145 (174)
T 1cv8_A 128 AKLNNGQEVIIIWNPWDN 145 (174)
T ss_dssp EEETTSCEEEEEECTTCS
T ss_pred eeecCCceEEEEeCCccC
Confidence 986688899999888854
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=96.90 E-value=0.015 Score=53.70 Aligned_cols=129 Identities=19% Similarity=0.225 Sum_probs=85.4
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHH--------hcCCcccCCHHHHhhhcCCCCCCCCCCChHHHHHHHHHcCCccCCCCC
Q 018958 152 KNQKECGCCWAFAAVAAVEGITKI--------RSGNLIQLSEQQLLDCSTNGNNGCLGGSREKAFAYIIQNQGIATEDEY 223 (348)
Q Consensus 152 ~dQg~cGsCwAfA~~~~lE~~~~~--------~~~~~~~LS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y 223 (348)
..||.-+=|-+||.+++|-+.... ...-...+|+++|.++ |..+...+.|+.. +|.-
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t---------s~~~~q~Iky~qs-yG~~----- 265 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKS-QGRD----- 265 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC---------CCCHHHHHHHHHH-TTEE-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHH-hCcc-----
Confidence 569999999999999988754321 1112356777777663 4567888888874 3431
Q ss_pred CCCCCCCCCCCCCCCcceeecceEecCCccHHHHHHHHH-cCCeEEEEEecchhhccccCceEeCCCCCCCCeEEEEEEE
Q 018958 224 PYQAVPGTCSAAQKPAAAKISNYEEVPSGDEQALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGF 302 (348)
Q Consensus 224 PY~~~~~~C~~~~~~~~~~i~~y~~~~~~~~~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGy 302 (348)
+.-.... -+.+++++.+. +.|+.|......+. ..+...+|||+||||
T Consensus 266 -------------------~~~~n~~--ls~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavvGy 313 (367)
T 1x9y_A 266 -------------------IHYQEGV--PSYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVVGN 313 (367)
T ss_dssp -------------------EEEEESC--CCHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEEEE
T ss_pred -------------------hhhhcCC--CCHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEEec
Confidence 1111122 25678888887 67998887654111 123467899999999
Q ss_pred eecCCCccEEEEEcCCCCCCCCCceEEEEcC
Q 018958 303 GTTEDGANYWLIKNSWGNTWGDAGYMKIVRD 333 (348)
Q Consensus 303 g~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 333 (348)
-.. ++.+|.++=|=|-. +++-++..
T Consensus 314 A~~-~~~~~y~~WNPW~~-----~~~~~sa~ 338 (367)
T 1x9y_A 314 AKI-NDQEKLIYWNPWDT-----ELSIQDAD 338 (367)
T ss_dssp EEE-TTEEEEEEECTTCS-----SCEEEETT
T ss_pred ccc-CCCcEEEEecCccC-----CceeecCC
Confidence 776 58899999888854 36666554
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=89.54 E-value=1.1 Score=39.54 Aligned_cols=64 Identities=23% Similarity=0.377 Sum_probs=38.0
Q ss_pred EecCCccHHHHHHHHHcC-CeEEEEEecchhhccccC---ceEeCCCC----CCCCeEEEEEEEeecCCCccEEEEEcCC
Q 018958 247 EEVPSGDEQALLKAVSMQ-PVSIAIAAYSTEFQSYKE---GIFNGVCG----TQLDHAVTIVGFGTTEDGANYWLIKNSW 318 (348)
Q Consensus 247 ~~~~~~~~~~ik~al~~g-PV~v~~~~~~~~f~~y~~---Giy~~~~~----~~~~Hav~iVGyg~~~~g~~ywivkNSW 318 (348)
..++..+.++|++.|..| ||.|-.... |..... -.|..+.+ ...+|+|+|+||+.. ..+|-+.+
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~~---~~p~~~~~~~~W~~~~G~~~~~~~~H~VVl~GYd~~-----~vyi~DP~ 196 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNAT---FAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYDQE-----SVYIRDPL 196 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEETT---SSCCCGGGCEEEEETTEEEEECTTEEEEEEEEECSS-----EEEEECTT
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeCC---cccccccccceeecCCCceeeccCCeEEEEEEEeCC-----EEEEECCC
Confidence 345556899999999965 999876542 222110 01111111 235799999999753 44555554
No 50
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=43.62 E-value=61 Score=30.24 Aligned_cols=54 Identities=24% Similarity=0.392 Sum_probs=35.2
Q ss_pred HHHHHHHH-cCCeEEEEEecchhhccccCceEeCCCCCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEc
Q 018958 255 QALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVR 332 (348)
Q Consensus 255 ~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 332 (348)
+.|++.|. ..||.+.-.-. .++||.+|=||.. .+||=+==.||-. .+|||.+.-
T Consensus 290 ~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~----~~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADG----RNFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECS----SSEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccC----CCeEEEEeCcCCC--CCcceeccC
Confidence 45677787 57986543111 1589999999964 4576664344422 589999853
No 51
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=41.23 E-value=58 Score=29.74 Aligned_cols=59 Identities=20% Similarity=0.321 Sum_probs=35.7
Q ss_pred HHHHHHHH-cCCeEEEEEecchhhccccCceEeCCCCCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEc
Q 018958 255 QALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVR 332 (348)
Q Consensus 255 ~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 332 (348)
+.|++.|. ..||.+.-.-. ... +..++||.+|=||.. .+||=+==.||-. .+|||.+..
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~--~~~-----------~~~~GHafV~DGY~~----~~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP--GSM-----------GQDAGHAFVIDGYNK----AGLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECT----TSCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEecC--CCC-----------CCCCceEEEEccccC----CCeEEEecCCCCC--CCceEeccC
Confidence 45677787 57977643211 110 134789999999964 3577774445422 489998863
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=37.12 E-value=62 Score=28.64 Aligned_cols=54 Identities=24% Similarity=0.406 Sum_probs=35.8
Q ss_pred HHHHHHHH-cCCeEEEEEecchhhccccCceEeCCCCCCCCeEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEc
Q 018958 255 QALLKAVS-MQPVSIAIAAYSTEFQSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGNTWGDAGYMKIVR 332 (348)
Q Consensus 255 ~~ik~al~-~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 332 (348)
+.|++.|. ..||.+.-.- +.++||.+|=||.. .+|+-|==.||-. .+|||.+..
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~----~~~~H~NwGWgG~--~nGYy~l~~ 226 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADG----RNFYHVNWGWGGV--SDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEES----SSCEEEECSSTTT--TCEEECTTC
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEccccc----CCEEEEEcCCCCC--CCceeeccc
Confidence 56777887 5698876421 13689999999974 3576663334311 589998853
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=25.21 E-value=69 Score=29.37 Aligned_cols=38 Identities=21% Similarity=0.480 Sum_probs=0.0
Q ss_pred CeEEEEEEEeec---CCCccEEEEEcCCC-CCCC-------------------------CCceEEEE
Q 018958 294 DHAVTIVGFGTT---EDGANYWLIKNSWG-NTWG-------------------------DAGYMKIV 331 (348)
Q Consensus 294 ~Hav~iVGyg~~---~~g~~ywivkNSWG-~~WG-------------------------~~Gy~~i~ 331 (348)
+||-.|++.... ..+...-.+||-|| ..|- ++|-|||+
T Consensus 246 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 312 (339)
T 2r9f_A 246 GHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMS 312 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEE
No 54
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=22.33 E-value=37 Score=23.92 Aligned_cols=27 Identities=7% Similarity=0.047 Sum_probs=19.9
Q ss_pred CCcccCCCCCcchHHHHHHHHHHHHHHHh
Q 018958 148 VTPIKNQKECGCCWAFAAVAAVEGITKIR 176 (348)
Q Consensus 148 v~pV~dQg~cGsCwAfA~~~~lE~~~~~~ 176 (348)
+--|+=||.|++| ...-..+|..+...
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~~ 63 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLREK 63 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHHH
Confidence 5568899999999 34556788776643
No 55
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=20.04 E-value=99 Score=28.08 Aligned_cols=38 Identities=21% Similarity=0.542 Sum_probs=0.0
Q ss_pred CeEEEEEEEeec---CCCccEEEEEcCCC-CCCC-------------------------CCceEEEE
Q 018958 294 DHAVTIVGFGTT---EDGANYWLIKNSWG-NTWG-------------------------DAGYMKIV 331 (348)
Q Consensus 294 ~Hav~iVGyg~~---~~g~~ywivkNSWG-~~WG-------------------------~~Gy~~i~ 331 (348)
+||-.|++.... ..+...-.+||-|| ..|- ++|-|||+
T Consensus 241 ~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 307 (326)
T 2nqa_A 241 SHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMS 307 (326)
T ss_dssp SCCEEEEEEEEEEETTEEEEEEEEECTTCC-CCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CceEEEEEEEEEecCCCceEEEEecCCCcCccccCCCCCCCccccccCHHHHHHhCCCCCCCEEEEE
Done!