Your job contains 1 sequence.
>018960
MHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDV
AKIALECISKKIKDEGCPLINQDTVFCKSILNEFAVKMNLELPAYSTRQSEALLPVFVSS
LVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTSGSATILSEIIKSKGKLYAALNKVKE
SNYSTQKIATSYVPTTAIPKSSSGIHPIPTTPEASVGMHSIPTIPEATAGIHPTPAITEA
STGMHPTSAAIEVSTGMHSTAADSETSTGMNLPCHPFKKPKLEPPSEPVVLPIPFVPPVL
GQHSEGGSSSTNKRRKNKRKANKKLRTDAQPCVSAQPLTQVPPCSVAQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018960
(348 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q0IQN6 - symbol:DRB8 "Double-stranded RNA-bindi... 281 1.8e-27 2
TAIR|locus:2829928 - symbol:DRB3 "dsRNA-binding protein 3... 239 1.6e-22 2
TAIR|locus:2024407 - symbol:HYL1 "HYPONASTIC LEAVES 1" sp... 258 7.0e-22 1
TAIR|locus:2057491 - symbol:DRB2 "dsRNA-binding protein 2... 251 5.2e-21 1
TAIR|locus:2163016 - symbol:DRB5 "dsRNA-binding protein 5... 241 4.2e-20 1
TAIR|locus:2081620 - symbol:DRB4 "double-stranded-RNA-bin... 215 6.9e-16 1
CGD|CAL0004775 - symbol:MSB2 species:5476 "Candida albica... 123 0.00039 1
UNIPROTKB|Q5ALT5 - symbol:MSB2 "Potential cell surface fl... 123 0.00039 1
>UNIPROTKB|Q0IQN6 [details] [associations]
symbol:DRB8 "Double-stranded RNA-binding protein 8"
species:39947 "Oryza sativa Japonica Group" [GO:0003725
"double-stranded RNA binding" evidence=IDA] InterPro:IPR001159
InterPro:IPR011907 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
GO:GO:0016075 EMBL:AP008218 GO:GO:0004525 EMBL:AB036988
EMBL:DQ009988 RefSeq:NP_001065960.1 UniGene:Os.3740
EnsemblPlants:LOC_Os12g01916.1 GeneID:4351288
KEGG:dosa:Os12t0109900-02 KEGG:osa:4351288 Gramene:Q0IQN6
HOGENOM:HOG000119022 OMA:TPKPLKV ProtClustDB:CLSN2695502
PANTHER:PTHR11207 Uniprot:Q0IQN6
Length = 424
Score = 281 (104.0 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 66/171 (38%), Positives = 101/171 (59%)
Query: 3 KNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAK 62
K+RLQE+AQ++G+ P Y + EG H P F+++V ++ +Y S F +RKAAEQ A+
Sbjct: 35 KSRLQEYAQKTGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAE 94
Query: 63 IALECISKKIK-DEGCPLINQDTVFCKSILNEFAVKMNLELPAY-STRQSEALLPVFVSS 120
+AL I K I + P + Q+T CK++L E+A KMN +P+Y T+ + L P F+ +
Sbjct: 95 VALMEIVKSIPANANIPAV-QETGLCKNLLQEYAQKMNYAIPSYICTKSASGLAP-FICT 152
Query: 121 LVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTS-GSATILSEIIKSKGK 170
+ G+ Y G R+KK+AE AAR + + S GSA ++ I GK
Sbjct: 153 VEIGGIQYIGAAARTKKDAEIKAARTALLAIQGQSEGSANGATKYIVVPGK 203
Score = 118 (46.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 44/131 (33%), Positives = 67/131 (51%)
Query: 85 VFCKSILNEFAVKMNLELPAYST-RQSEALLPVFVSSLVFNGVTYTGEPGR-SKKEAEQL 142
VF KS L E+A K L+ P Y T ++ + PVF S++V N +Y PG ++K AEQ
Sbjct: 33 VF-KSRLQEYAQKTGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKAAEQS 91
Query: 143 AARAVIRTLLVTSGSATILSEIIKSKGKLYAALNKVKESNYSTQKIATSYVPTTAIPKSS 202
AA + + V S A ++ G N ++E Y+ QK+ + +P+ KS+
Sbjct: 92 AAEVALMEI-VKSIPANANIPAVQETG---LCKNLLQE--YA-QKMNYA-IPSYICTKSA 143
Query: 203 SGIHPIPTTPE 213
SG+ P T E
Sbjct: 144 SGLAPFICTVE 154
Score = 44 (20.5 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 257 MHSTAADSETSTGMNL--PCHPFKKPKLEPPSE 287
M T E S G PC K+ + EPP +
Sbjct: 264 MQPTVITQEASCGTLFLQPCEEAKRVEAEPPRD 296
>TAIR|locus:2829928 [details] [associations]
symbol:DRB3 "dsRNA-binding protein 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725 HOGENOM:HOG000243232
EMBL:BT012284 EMBL:AP000602 EMBL:AK222128 IPI:IPI00525256
RefSeq:NP_001030779.2 RefSeq:NP_189329.3 UniGene:At.37133
ProteinModelPortal:Q9LJF5 SMR:Q9LJF5 STRING:Q9LJF5
EnsemblPlants:AT3G26932.1 EnsemblPlants:AT3G26932.2 GeneID:822310
KEGG:ath:AT3G26932 TAIR:At3g26932 eggNOG:NOG246955
InParanoid:Q2V3S2 OMA:SSVERNC PhylomeDB:Q9LJF5
ProtClustDB:CLSN2680394 Genevestigator:Q9LJF5 Uniprot:Q9LJF5
Length = 359
Score = 239 (89.2 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 56/148 (37%), Positives = 84/148 (56%)
Query: 1 MHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDV 60
M+KN+LQE AQRS LP Y EG HAP+F+ASV+ +G + SP S + AE
Sbjct: 1 MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60
Query: 61 AKIALECISKKIKDEGCPL-INQDTVFCKSILNEFAVKMNLELPAY-STRQSEALLPVFV 118
A++AL +S K + + +T K++L E A + L+LP Y S R +P F
Sbjct: 61 AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120
Query: 119 SSLVFNGVTYTGEPGRSKKEAEQLAARA 146
++ G+++ GE ++KK+AE+ AA A
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIA 148
Score = 37 (18.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 136 KKEAEQLAARAVIRTLLV-TSGSATILSEIIKSK 168
++E Q R VIRT+ T+ + T +++ K
Sbjct: 186 RREPNQSRRRTVIRTIRQNTTTTTTTTGDLLCEK 219
>TAIR|locus:2024407 [details] [associations]
symbol:HYL1 "HYPONASTIC LEAVES 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IMP] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0035279 "mRNA cleavage involved
in gene silencing by miRNA" evidence=IMP] [GO:0031054 "pre-miRNA
processing" evidence=IMP] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA;IMP] [GO:0015030 "Cajal
body" evidence=IDA] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0010445 "nuclear dicing body" evidence=IDA] [GO:0051607
"defense response to virus" evidence=RCA] [GO:0010305 "leaf
vascular tissue pattern formation" evidence=IMP] [GO:0010589 "leaf
proximal/distal pattern formation" evidence=IMP] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0009735
GO:GO:0009733 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0035198
GO:GO:0035279 GO:GO:0031054 GO:GO:0010267 GO:GO:0010305
EMBL:AC000132 EMBL:AF276440 EMBL:AY054631 EMBL:AY081525
EMBL:AK319123 IPI:IPI00525041 IPI:IPI00975255 PIR:H86230
RefSeq:NP_563850.1 UniGene:At.10223 PDB:2L2M PDB:2L2N PDB:3ADG
PDB:3ADI PDB:3ADJ PDBsum:2L2M PDBsum:2L2N PDBsum:3ADG PDBsum:3ADI
PDBsum:3ADJ ProteinModelPortal:O04492 SMR:O04492 DIP:DIP-33453N
IntAct:O04492 STRING:O04492 PaxDb:O04492 PRIDE:O04492
EnsemblPlants:AT1G09700.1 GeneID:837498 KEGG:ath:AT1G09700
TAIR:At1g09700 eggNOG:NOG237225 InParanoid:O04492 OMA:CMNGLKE
ProtClustDB:CLSN2916994 EvolutionaryTrace:O04492
Genevestigator:O04492 GO:GO:0010445 GO:GO:0010589 Uniprot:O04492
Length = 419
Score = 258 (95.9 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 60/151 (39%), Positives = 90/151 (59%)
Query: 3 KNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAK 62
K+RLQE+AQ+ +P PVY+ EG H F+++V +DGV Y S F +RKAAEQ A+
Sbjct: 17 KSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAE 76
Query: 63 IALECISKKIKDEGCPLINQ---DTVFCKSILNEFAVKMNLELPAYSTRQSEALLPV--F 117
+AL ++K + C ++Q +T CK++L E+A KMN +P Y ++ E L V F
Sbjct: 77 VALRELAKSSELSQC--VSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQF 134
Query: 118 VSSLVFNGVTYTGEPGRSKKEAEQLAARAVI 148
++ G+ YTG R+KK+AE A R +
Sbjct: 135 TCTVEIGGIKYTGAATRTKKDAEISAGRTAL 165
>TAIR|locus:2057491 [details] [associations]
symbol:DRB2 "dsRNA-binding protein 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA;IMP]
[GO:0070919 "production of siRNA involved in chromatin silencing by
small RNA" evidence=IMP] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0005737
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:3.30.160.20
GO:GO:0003725 EMBL:AC006283 GO:GO:0035196 EMBL:AY034976
EMBL:AY062965 IPI:IPI00547657 PIR:B84684 RefSeq:NP_565672.1
UniGene:At.13732 ProteinModelPortal:Q9SKN2 SMR:Q9SKN2 IntAct:Q9SKN2
STRING:Q9SKN2 PRIDE:Q9SKN2 EnsemblPlants:AT2G28380.1 GeneID:817386
KEGG:ath:AT2G28380 TAIR:At2g28380 eggNOG:NOG291691
HOGENOM:HOG000243232 InParanoid:Q9SKN2 OMA:PCHSMAP PhylomeDB:Q9SKN2
ProtClustDB:CLSN2688512 Genevestigator:Q9SKN2 GO:GO:0070919
Uniprot:Q9SKN2
Length = 434
Score = 251 (93.4 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 88/293 (30%), Positives = 138/293 (47%)
Query: 1 MHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDV 60
M+KN+LQE AQRS LP Y EG HAP+F+A+V+ +G + SP S + AE
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60
Query: 61 AKIALECISKKIKDEGCPL-INQDTVFCKSILNEFAVKMNLELPAYST-RQSEALLPVFV 118
A++AL +S + I +T K++L E A ++ LP Y+T R PVF
Sbjct: 61 AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120
Query: 119 SSLVFNGVTYTGEPGRSKKEAEQLAARAV---IRTLLVTSGSATILSEIIKSKGKLYAA- 174
++ G+T+TG+P ++KK+AE+ AA A ++ L + S+ E I ++ A
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180
Query: 175 --LN-KVKESNYSTQKIATSYVPTTAIPKSSSGIHPIPTTPEASVGMHSIPTIPEATAGI 231
+N ++KE N T +++ VP K + PT+P+ S P T+ I
Sbjct: 181 ALINYRIKE-NIGTGSSSSAPVP---FAKKFFMQNLRPTSPQPS---------PATTSRI 227
Query: 232 HPTPAITEASTGMHPTSAAIEVSTGMHSTAADSETSTGMNLPCHPFKKPKLEP 284
P + S + AA ++G+ A + S P F P P
Sbjct: 228 LPFICPKQPSRSSRSSLAA---TSGIDRIMAAALESRSYQRPQQRFANPPYVP 277
>TAIR|locus:2163016 [details] [associations]
symbol:DRB5 "dsRNA-binding protein 5" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010267 "production
of ta-siRNAs involved in RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] [GO:0051607 "defense response to virus"
evidence=RCA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 HOGENOM:HOG000243232 ProtClustDB:CLSN2680394
EMBL:AB010072 EMBL:AK117808 EMBL:BT009653 IPI:IPI00534111
RefSeq:NP_198923.2 UniGene:At.30254 ProteinModelPortal:Q8GY79
SMR:Q8GY79 IntAct:Q8GY79 STRING:Q8GY79 EnsemblPlants:AT5G41070.1
GeneID:834109 KEGG:ath:AT5G41070 TAIR:At5g41070 eggNOG:NOG295240
InParanoid:Q8GY79 OMA:LRWINLL PhylomeDB:Q8GY79
Genevestigator:Q8GY79 Uniprot:Q8GY79
Length = 393
Score = 241 (89.9 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 58/153 (37%), Positives = 87/153 (56%)
Query: 1 MHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDV 60
M+KN+LQE AQRS LP Y EG HAP+F+ASV+ +G + SP S + AE
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60
Query: 61 AKIALECISKKIKDEGCPL-INQDTVFCKSILNEFAVKMNLELPAY-STRQSEALLPVFV 118
A+++L +S ++ + I +T K++L E A + L+LP Y S R P F
Sbjct: 61 AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120
Query: 119 SSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTL 151
++ G+T+TGE ++KK+AE+ AA A +L
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSL 153
>TAIR|locus:2081620 [details] [associations]
symbol:DRB4 "double-stranded-RNA-binding protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA;ISS;IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA;IMP] [GO:0060145 "viral gene silencing in virus
induced gene silencing" evidence=IMP] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA;IMP]
[GO:0070919 "production of siRNA involved in chromatin silencing by
small RNA" evidence=IMP] [GO:0051607 "defense response to virus"
evidence=RCA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0019048 Gene3D:3.30.160.20
EMBL:AL162651 GO:GO:0003725 GO:GO:0010267 GO:GO:0035196
GO:GO:0070919 EMBL:AB455097 EMBL:AY074363 EMBL:AY150509
IPI:IPI00529941 IPI:IPI00914309 PIR:T48069 RefSeq:NP_001154686.1
RefSeq:NP_191839.2 RefSeq:NP_974480.1 UniGene:At.34049
ProteinModelPortal:Q8H1D4 SMR:Q8H1D4 IntAct:Q8H1D4 STRING:Q8H1D4
PaxDb:Q8H1D4 PRIDE:Q8H1D4 EnsemblPlants:AT3G62800.1
EnsemblPlants:AT3G62800.2 GeneID:825455 KEGG:ath:AT3G62800
TAIR:At3g62800 eggNOG:NOG306267 HOGENOM:HOG000072681
InParanoid:Q8H1D4 OMA:YANEREG PhylomeDB:Q8H1D4
ProtClustDB:CLSN2690620 Genevestigator:Q8H1D4 GO:GO:0060145
Uniprot:Q8H1D4
Length = 355
Score = 215 (80.7 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 73/263 (27%), Positives = 125/263 (47%)
Query: 1 MHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDV 60
++K +LQ +A + + LPVY + EG HAP+FR +V+ G T+ S F K+AE
Sbjct: 4 VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63
Query: 61 AKIALECISKKIKDEGCPLINQDTVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVS 119
AKIA+ ++ + EG D + K++L E A K + LP Y+T S + P F S
Sbjct: 64 AKIAVASLTPQ-SPEGI-----DVAY-KNLLQEIAQKESSLLPFYATATSGPSHAPTFTS 116
Query: 120 SLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLV----TSGSATILSEIIKSKGKLYAAL 175
++ F G ++GE ++KK AE AA+ ++ +GS T+ SE + +
Sbjct: 117 TVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQEDVNSNVKSS 176
Query: 176 NKVKESNYSTQKIATSYVPTTAIPKSSS---GIHPIPTT--PEASVGMHSIPTIPEATAG 230
+ S S++ + T P+ I + +H P + E +V ++ PE
Sbjct: 177 PQEIHSQPSSKVVMTPDTPSKGIKVNEDEFPDLHDAPASNAKEINVALNE----PENPTN 232
Query: 231 IHPTPAITEASTGMHPTSAAIEV 253
A+T M+ S+++ +
Sbjct: 233 DGTLSALTTDGMKMNIASSSLPI 255
>CGD|CAL0004775 [details] [associations]
symbol:MSB2 species:5476 "Candida albicans" [GO:0031505
"fungal-type cell wall organization" evidence=IMP] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0030427 "site of polarized
growth" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:1900430 "positive
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0009986 "cell surface" evidence=IDA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IMP]
[GO:1900233 "positive regulation of single-species biofilm
formation on inanimate substrate" evidence=IMP] [GO:0030010
"establishment of cell polarity" evidence=IEA] [GO:0006972
"hyperosmotic response" evidence=IEA] [GO:0001402 "signal
transduction involved in filamentous growth" evidence=IEA]
[GO:0007232 "osmosensory signaling pathway via Sho1 osmosensor"
evidence=IEA] [GO:0005034 "osmosensor activity" evidence=IEA]
CGD:CAL0004775 GO:GO:0005576 GO:GO:0009986 GO:GO:0031505
GO:GO:0043410 eggNOG:NOG12793 EMBL:AACQ01000008 EMBL:AACQ01000007
GO:GO:0044182 GO:GO:1900430 GO:GO:1900233 RefSeq:XP_722401.1
RefSeq:XP_722538.1 ProteinModelPortal:Q5ALT5 STRING:Q5ALT5
GeneID:3635830 GeneID:3635923 KEGG:cal:CaO19.1490
KEGG:cal:CaO19.9067 Uniprot:Q5ALT5
Length = 1409
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 42/131 (32%), Positives = 60/131 (45%)
Query: 139 AEQLAARAVIRTLLVTSGSATILSEIIKSKGKLYAALNKVKESNYSTQKIATSYVPTTAI 198
+EQ + T T AT+ S + +S+ +A+ V ES+ Q AT+ TTA
Sbjct: 899 SEQSGVETALSTQPTTGTEATVTSGVSQSEQTGTSAVTGVTESSEQIQSGATTPATTTA- 957
Query: 199 PKSSSGIHPIPTTPEASVGMHSIPTIP-EATAGIHPTPAITEASTGMHPTSAAIEVSTGM 257
S + EAS + T EAT G T A +EA+T T+AA E +T
Sbjct: 958 ----SDATAVTNASEASAESQATTTAASEATTGSQVTTAASEAATESQATTAASEAATES 1013
Query: 258 HSTAADSETST 268
+T A SE +T
Sbjct: 1014 QATTAASEAAT 1024
>UNIPROTKB|Q5ALT5 [details] [associations]
symbol:MSB2 "Potential cell surface flocculin"
species:237561 "Candida albicans SC5314" [GO:0005576 "extracellular
region" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0031505
"fungal-type cell wall organization" evidence=IMP] [GO:0043410
"positive regulation of MAPK cascade" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900233 "positive regulation of single-species
biofilm formation on inanimate substrate" evidence=IMP] [GO:1900430
"positive regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] CGD:CAL0004775 GO:GO:0005576
GO:GO:0009986 GO:GO:0031505 GO:GO:0043410 eggNOG:NOG12793
EMBL:AACQ01000008 EMBL:AACQ01000007 GO:GO:0044182 GO:GO:1900430
GO:GO:1900233 RefSeq:XP_722401.1 RefSeq:XP_722538.1
ProteinModelPortal:Q5ALT5 STRING:Q5ALT5 GeneID:3635830
GeneID:3635923 KEGG:cal:CaO19.1490 KEGG:cal:CaO19.9067
Uniprot:Q5ALT5
Length = 1409
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 42/131 (32%), Positives = 60/131 (45%)
Query: 139 AEQLAARAVIRTLLVTSGSATILSEIIKSKGKLYAALNKVKESNYSTQKIATSYVPTTAI 198
+EQ + T T AT+ S + +S+ +A+ V ES+ Q AT+ TTA
Sbjct: 899 SEQSGVETALSTQPTTGTEATVTSGVSQSEQTGTSAVTGVTESSEQIQSGATTPATTTA- 957
Query: 199 PKSSSGIHPIPTTPEASVGMHSIPTIP-EATAGIHPTPAITEASTGMHPTSAAIEVSTGM 257
S + EAS + T EAT G T A +EA+T T+AA E +T
Sbjct: 958 ----SDATAVTNASEASAESQATTTAASEATTGSQVTTAASEAATESQATTAASEAATES 1013
Query: 258 HSTAADSETST 268
+T A SE +T
Sbjct: 1014 QATTAASEAAT 1024
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.125 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 348 322 0.00085 116 3 11 23 0.47 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 574 (61 KB)
Total size of DFA: 185 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.88u 0.09s 30.97t Elapsed: 00:00:01
Total cpu time: 30.88u 0.09s 30.97t Elapsed: 00:00:01
Start: Fri May 10 13:05:33 2013 End: Fri May 10 13:05:34 2013