BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018964
(348 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50651|RIR2A_ARATH Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis
thaliana GN=RNR2A PE=1 SV=2
Length = 341
Score = 582 bits (1501), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/348 (80%), Positives = 307/348 (88%), Gaps = 7/348 (2%)
Query: 1 MGSLKNETENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTA 60
MGSLK E + E+GE E EP+LM QNQRF MFPIRYK +WEMYKKA+ASFWTA
Sbjct: 1 MGSLK---EGQGRDMEEGESE----EPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTA 53
Query: 61 EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGF 120
EEVDLS DVQ WE L DSEKHFISH+LAFFAASDGIVLENLAARFLND+Q+PEARAFYGF
Sbjct: 54 EEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGF 113
Query: 121 QIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180
QIAMENIHSEMYSLLLET+IKDSKEK RLFNAIE IPC+++KAKW LDWI S SFA RL
Sbjct: 114 QIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRL 173
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L
Sbjct: 174 VAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP 233
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVEN 300
+KV+ +VHEAVEIET+FVC+ALPC LIGMNS+LMSQYI+FVADRLLV LGC+R Y EN
Sbjct: 234 LEKVYQIVHEAVEIETEFVCKALPCDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAEN 293
Query: 301 PFDWMEFISLQGKANFFERRVGDYQKASVMSSLQNGEKNFVFKLDEDF 348
PFDWMEFISLQGK NFFE+RVG+YQKASVMS+LQNG +N+ F +EDF
Sbjct: 294 PFDWMEFISLQGKTNFFEKRVGEYQKASVMSNLQNGNQNYEFTTEEDF 341
>sp|P49730|RIR2_TOBAC Ribonucleoside-diphosphate reductase small chain OS=Nicotiana
tabacum PE=2 SV=1
Length = 329
Score = 517 bits (1332), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/324 (75%), Positives = 274/324 (84%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFIS 84
+EP+L RFCMFPI+Y Q+WEMYKKA ASFWTAEEVDLS D +HWE L E+HFI+
Sbjct: 6 EEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGERHFIT 65
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLE+YIKDS
Sbjct: 66 HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSD 125
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
EK RLF A+E PCV +KAKWAL WI S++FAERLV FACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIFWLKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFACLLYSLLR +L ++V +V +AVEIE +FVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFVCDALP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDY 324
CAL+GMN LMS+YI+FVADRLL ALG + YN +NPFDWME ISLQGK NFFE+RVG+Y
Sbjct: 246 CALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEKRVGEY 305
Query: 325 QKASVMSSLQNGEKNFVFKLDEDF 348
QKASVMSSL FKLDEDF
Sbjct: 306 QKASVMSSLNGNGATHEFKLDEDF 329
>sp|Q6Y657|RIR2B_ARATH Putative ribonucleoside-diphosphate reductase small chain B
OS=Arabidopsis thaliana GN=RNR2B PE=5 SV=1
Length = 333
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/328 (73%), Positives = 278/328 (84%), Gaps = 4/328 (1%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFI 83
+EPIL RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L + E+HFI
Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIVLENL+ RF++D+QI EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+
Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KE+ LF AIE IPCV +KA+WA+ WI+ S SFAER+V FACVEGIFFSGSFC+IFWLKK
Sbjct: 126 KERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACL+YSLLR +L ++ +V +AVEIE +FVC+AL
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREFVCDAL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGD 323
PCAL+GMN LMSQYI+FVADRLL ALGC + Y V NPFDWME ISLQGK NFFE+RVG+
Sbjct: 246 PCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFEKRVGE 305
Query: 324 YQKASVMSSLQNG---EKNFVFKLDEDF 348
YQKAS+MSS+ + VFKLDEDF
Sbjct: 306 YQKASIMSSVHGNAAFNDDHVFKLDEDF 333
>sp|Q9LSD0|RIR2C_ARATH Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis
thaliana GN=TSO2 PE=2 SV=1
Length = 332
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/327 (74%), Positives = 279/327 (85%), Gaps = 3/327 (0%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL-DSEKHFI 83
+EP+L RFCMFPI Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L D E+HFI
Sbjct: 6 EEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFI 65
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+
Sbjct: 66 KHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDN 125
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
KE+ LF AIE IPCVA+KA+WA+ WI S +FAER++ FACVEGIFFSGSFC+IFWLKK
Sbjct: 126 KERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKK 185
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263
RGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ +L ++V +V +AVEIE +FVC+AL
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFVCDAL 245
Query: 264 PCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGD 323
PCAL+GMN LMSQYI+FVADRLL ALG + Y V NPFDWME ISLQGK NFFE+RVGD
Sbjct: 246 PCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFEKRVGD 305
Query: 324 YQKASVMSSLQ-NGE-KNFVFKLDEDF 348
YQKASVMSS+ NG N VF LDEDF
Sbjct: 306 YQKASVMSSVNGNGAFDNHVFSLDEDF 332
>sp|P07201|RIR2_SPISO Ribonucleoside-diphosphate reductase small chain OS=Spisula
solidissima PE=2 SV=2
Length = 384
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/324 (66%), Positives = 259/324 (79%), Gaps = 2/324 (0%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L + +RF + PI+Y +W+MYKKA+ASFWTAEEVDLS+D+ HWE L EKHFISH
Sbjct: 62 EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISH 121
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD +E
Sbjct: 122 VLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQE 181
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +PCV +KA WA+ WI+ S S+AER+V FA VEGIFFSGSF +IFWLKKR
Sbjct: 182 RDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKR 241
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
G+MPGLTFSNELISRDEGLHCDFACL++S L + +++H ++ EAV+IE F+ EALP
Sbjct: 242 GIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALP 301
Query: 265 CALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDY 324
C LIGMN LM QYI+FVADRLL+ L C + YN ENPFD+ME ISL+GK NFFE+RVG+Y
Sbjct: 302 CRLIGMNCDLMRQYIEFVADRLLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEY 361
Query: 325 QKASVMSSLQNGEKNFVFKLDEDF 348
QK VMS G+ + F LD DF
Sbjct: 362 QKMGVMSGGNTGDSH-AFTLDADF 384
>sp|P79733|RIR2_DANRE Ribonucleoside-diphosphate reductase subunit M2 OS=Danio rerio
GN=rrm2 PE=1 SV=1
Length = 386
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/350 (61%), Positives = 269/350 (76%), Gaps = 9/350 (2%)
Query: 4 LKNETENEVNQREQGEQEQE----DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWT 59
L ++T ++ +G+ + + ++EP+L E RF +FPI+Y +W+MYKKA+ASFWT
Sbjct: 41 LASKTARKIFDESEGQSKAKKGAVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWT 100
Query: 60 AEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYG 119
AEEVDLS+D+QHW+ L D E++FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYG
Sbjct: 101 AEEVDLSKDLQHWDSLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYG 160
Query: 120 FQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAE 178
FQIAMENIHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WAL+WI ++ + E
Sbjct: 161 FQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGE 220
Query: 179 RLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238
R+V FA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 221 RVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINK 280
Query: 239 LHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNV 298
+ V ++ AVEIE +F+ +ALP LIGMN LM QYI+FVADRLL+ LG + Y V
Sbjct: 281 PSEETVKKIIMNAVEIEQEFLTDALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRV 340
Query: 299 ENPFDWMEFISLQGKANFFERRVGDYQKASVMSSLQNGEKNFVFKLDEDF 348
ENPFD+ME ISL+GK NFFE+RVG+YQ+ VMS G + F LD DF
Sbjct: 341 ENPFDFMENISLEGKTNFFEKRVGEYQRMGVMS----GTTDNTFTLDADF 386
>sp|O15910|RIR2_TRYBB Ribonucleoside-diphosphate reductase small chain OS=Trypanosoma
brucei brucei GN=RNR2 PE=2 SV=1
Length = 337
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/330 (63%), Positives = 259/330 (78%), Gaps = 4/330 (1%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSE 79
+E E +EP+L E R+ +FPI+Y +W+ YK+A++S WT EE+DL D+ WE+L D E
Sbjct: 11 KEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGE 70
Query: 80 KHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139
+HFI HVLAFFAASDGIVLENLA RF+ ++Q+PE R FYGFQIAMENIHSE YS+L++TY
Sbjct: 71 RHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTY 130
Query: 140 IKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIF 199
+ D EK RL +AI IPC+ +KAKWA++WI S SF RLV FA VEGIFFSGSFCAIF
Sbjct: 131 VVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIF 190
Query: 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQF 258
WLKKRGLMPGLTFSNELISRDEGLH DFACLLY + +L +V ++ AV IE +F
Sbjct: 191 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREF 250
Query: 259 VCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFE 318
+C+ALP LIGMNS LM+QYI+FVADRLLV+LG R YN +NPFD+M+ ISLQGK NFFE
Sbjct: 251 ICDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFE 310
Query: 319 RRVGDYQKASVMSSLQNGEKNFVFKLDEDF 348
++VG+YQKA VMSS ++ + VF LD DF
Sbjct: 311 KKVGEYQKAGVMSSERSSK---VFSLDADF 337
>sp|Q4KLN6|RIR2_RAT Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus
norvegicus GN=Rrm2 PE=2 SV=1
Length = 390
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/326 (65%), Positives = 258/326 (79%), Gaps = 5/326 (1%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ +V IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVG 322
LP LIGMN +LM QYI+FVADRL++ LG + + VENPFD+ME ISL+GK NFFE+RVG
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEKRVG 368
Query: 323 DYQKASVMSSLQNGEKNFVFKLDEDF 348
+YQ+ VMS N +N F LD DF
Sbjct: 369 EYQRMGVMS---NSTEN-SFTLDADF 390
>sp|Q9C167|RIR2_NEUCR Ribonucleoside-diphosphate reductase small chain OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=rnr-2 PE=3 SV=2
Length = 410
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/340 (63%), Positives = 259/340 (76%), Gaps = 11/340 (3%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+ +E EP+L E QRF +FPI+Y ++W+MYKKA+ASFWTAEE+DLS+D+ W RL D
Sbjct: 71 KPEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDD 130
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
EK FISH+LAFFAASDGIV ENL RF ++QIPEAR FYGFQI MENIHSE YSLL++T
Sbjct: 131 EKFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDT 190
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWI-HSSDSFAERLVGFACVEGIFFSGSFCA 197
YIK+ ++ LFNAI+ IPC+ +KA WAL WI S +FA+RLV FA VEGIFFSG+F +
Sbjct: 191 YIKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFAS 250
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L R Q + ++ +AV IE +
Sbjct: 251 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQE 310
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFF 317
F+ EALPCAL+GMN+ LM QYI+FVADRLLVALG ++ Y NPFD+ME ISL GK NFF
Sbjct: 311 FLTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYRSTNPFDFMENISLGGKTNFF 370
Query: 318 ERRVGDYQKASVMSSLQNG---------EKNFVFKLDEDF 348
E+RVGDYQKA VM+S + E F DEDF
Sbjct: 371 EKRVGDYQKAGVMNSTKKADADAEVAKNENGGDFTFDEDF 410
>sp|P11157|RIR2_MOUSE Ribonucleoside-diphosphate reductase subunit M2 OS=Mus musculus
GN=Rrm2 PE=1 SV=1
Length = 390
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/326 (65%), Positives = 256/326 (78%), Gaps = 5/326 (1%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVG 322
LP LIGMN +LM QYI+FVADRL++ LG + + VENPFD+ME ISL+GK NFFE+RVG
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEKRVG 368
Query: 323 DYQKASVMSSLQNGEKNFVFKLDEDF 348
+YQ+ VMS N +N F LD DF
Sbjct: 369 EYQRMGVMS---NSTEN-SFTLDADF 390
>sp|Q60561|RIR2_MESAU Ribonucleoside-diphosphate reductase subunit M2 OS=Mesocricetus
auratus GN=RRM2 PE=2 SV=1
Length = 386
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/326 (65%), Positives = 255/326 (78%), Gaps = 9/326 (2%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFI
Sbjct: 69 EDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFI 128
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDS
Sbjct: 129 SHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDS 188
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 189 KEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 248
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + Q+V ++ AV IE +F+ EA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFLTEA 308
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVG 322
LP LIGMN +LM QYI+FVADRL++ LG + + VENPFD+ME ISL+GK NFFE+RVG
Sbjct: 309 LPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEKRVG 368
Query: 323 DYQKASVMSSLQNGEKNFVFKLDEDF 348
+YQ+ VMS+ F LD DF
Sbjct: 369 EYQRMGVMSN--------SFTLDADF 386
>sp|P31350|RIR2_HUMAN Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens
GN=RRM2 PE=1 SV=1
Length = 389
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 254/326 (77%), Gaps = 5/326 (1%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV IE +F+ EA
Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEA 307
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVG 322
LP LIGMN +LM QYI+FVADRL++ LG + + VENPFD+ME ISL+GK NFFE+RVG
Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVG 367
Query: 323 DYQKASVMSSLQNGEKNFVFKLDEDF 348
+YQ+ VMSS F LD DF
Sbjct: 368 EYQRMGVMSSPTENS----FTLDADF 389
>sp|P42521|RIR2_DICDI Ribonucleoside-diphosphate reductase small subunit OS=Dictyostelium
discoideum GN=rnrB-1 PE=2 SV=2
Length = 338
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/327 (65%), Positives = 258/327 (78%), Gaps = 4/327 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFIS 84
EPIL E RF +FPI+Y +W MYKKA AS W AEE+DL D WE +L D+E+HFIS
Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71
Query: 85 HVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144
HVLAFFAASDGIV ENLA RF++++QIPEAR FYGFQIA+ENIHSE YSLL+ETYIKD +
Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131
Query: 145 EKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K +LFNAIE IPC+ +KA+WAL WI+ SDSFAERLV FA VEGIFFSGSFC+IFWLKKR
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLM GLTFSNELISRDEGLHCDFACLLY+ L+++L + + M+ +AVE E +F+CE+LP
Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251
Query: 265 CALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDY 324
LIGMNS MSQYI+F ADRL+V+LG ++ +N NPF+WME ISLQ K+NFFE +V +Y
Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVAEY 311
Query: 325 QKASV---MSSLQNGEKNFVFKLDEDF 348
K V ++ Q ++ LDEDF
Sbjct: 312 AKTGVAIQGNNQQKNNQSRTLVLDEDF 338
>sp|Q4R7Q7|RIR2_MACFA Ribonucleoside-diphosphate reductase subunit M2 OS=Macaca
fascicularis GN=RRM2 PE=2 SV=1
Length = 389
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 254/326 (77%), Gaps = 5/326 (1%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ EP+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
SHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ LFNAIE +PCV +KA WAL WI + ++ ER+V FA VEGIFFSGSF +IFWLK
Sbjct: 188 KEREFLFNAIETMPCVEKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
KRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ AV +E +F+ EA
Sbjct: 248 KRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRVEQEFLTEA 307
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVG 322
LP LIGMN +LM QYI+FVADRL++ LG + + VENPFD+ME ISL+GK NFFE+RVG
Sbjct: 308 LPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVG 367
Query: 323 DYQKASVMSSLQNGEKNFVFKLDEDF 348
+YQ+ VMSS F LD DF
Sbjct: 368 EYQRMGVMSSPTENS----FTLDADF 389
>sp|P50650|RIR2_PLAF4 Ribonucleoside-diphosphate reductase small chain OS=Plasmodium
falciparum (isolate Dd2) GN=RNR2 PE=2 SV=1
Length = 349
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/340 (61%), Positives = 265/340 (77%), Gaps = 7/340 (2%)
Query: 9 ENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQD 68
E E + ++G +E E IL +++ RF ++PI Y VW+ YKKA+ASFWTAEE+DLS D
Sbjct: 17 EREFSDLQKG---KEINEKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSD 73
Query: 69 VQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIH 128
++ +E+L ++EKHFI HVLAFFAASDGIVLENLA++FL ++QI EA+ FY FQIA+ENIH
Sbjct: 74 LKDFEKLNENEKHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIH 133
Query: 129 SEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEG 188
SE YSLL++ YIKD KE+ LF+AIENIP V KA WA WI+ ++SFAER+V ACVEG
Sbjct: 134 SETYSLLIDNYIKDEKERLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEG 193
Query: 189 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMV 248
I FSGSFCAIFW KK+ + GLTFSNELISRDEGLH DF CL+YSLL +L Q + ++V
Sbjct: 194 ILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQIIQNIV 253
Query: 249 HEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFI 308
EAVE+E F+CE+LPC LIGMNS LMSQYI+FVADRLL LGC + ++ +NPF+WM+ I
Sbjct: 254 KEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLI 313
Query: 309 SLQGKANFFERRVGDYQKASVMSSLQNGEKNFVFKLDEDF 348
SLQGK NFFE+RV DYQK+ VM+ K+ VF L+ +F
Sbjct: 314 SLQGKTNFFEKRVADYQKSGVMAQ----RKDQVFCLNTEF 349
>sp|O46310|RIR2_LEIAM Ribonucleoside-diphosphate reductase small subunit OS=Leishmania
amazonensis PE=3 SV=1
Length = 345
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/326 (61%), Positives = 257/326 (78%), Gaps = 4/326 (1%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
++EP+ E R+ +FPI+Y +W YK+ ++ WT EE+DL D++ W L D E+HFI
Sbjct: 23 EEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFI 82
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFA SDGIV+ENLA RF++D+++PEARAFYGFQ+ MENIHSE YS+LL+TYI DS
Sbjct: 83 KHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDS 142
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+EK RL +AI+ IPC+ +KA+W + WI SS SF +RL+GFA VEGIFFSGSFCA+FWLKK
Sbjct: 143 EEKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKK 202
Query: 204 RGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262
RGLMPGLTFSNELISRDEGLH DFACLLY S ++ +L ++V ++ +AV IE +F+C+A
Sbjct: 203 RGLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDA 262
Query: 263 LPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVG 322
LP LIGMN+ LM+QYI+FVADRLLV+LG ++ Y PFD+ME ISLQGK NFFE+RVG
Sbjct: 263 LPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVG 322
Query: 323 DYQKASVMSSLQNGEKNFVFKLDEDF 348
+YQKA VMS+ +K F L EDF
Sbjct: 323 EYQKAGVMSTEGTSKK---FSLSEDF 345
>sp|P48592|RIR2_DROME Ribonucleoside-diphosphate reductase subunit M2 OS=Drosophila
melanogaster GN=RnrS PE=1 SV=2
Length = 393
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 254/325 (78%), Gaps = 7/325 (2%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EP+L E +RF +FPI+Y +W+MYKKA+ASFWT EEVDLS+D+ W RL D E+HFISH
Sbjct: 74 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDERHFISH 133
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMEN+HSEMYS+L++TYI+D +
Sbjct: 134 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 193
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ LFNAIE +P V +KA WAL WI S S +F ER++ FA VEGIFFSGSF +IFWLKKR
Sbjct: 194 REYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKR 253
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFA L++ L +R +++ ++ +AV IE +F+ +ALP
Sbjct: 254 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALP 313
Query: 265 CALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDY 324
LIGMN LMSQYI+FVADRLLV LG + YN +NPF++ME ISL GK NFFE++VG+Y
Sbjct: 314 VNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEKKVGEY 373
Query: 325 QKASVMSS-LQNGEKNFVFKLDEDF 348
Q+ V+S+ L N VF LD DF
Sbjct: 374 QRMGVVSNPLDN-----VFTLDADF 393
>sp|Q7LG56|RIR2B_HUMAN Ribonucleoside-diphosphate reductase subunit M2 B OS=Homo sapiens
GN=RRM2B PE=1 SV=1
Length = 351
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/342 (60%), Positives = 263/342 (76%), Gaps = 6/342 (1%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA V
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAV 193
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 194 EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVRE 253
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWME 306
++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV LG + + ENPFD+ME
Sbjct: 254 IIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFME 313
Query: 307 FISLQGKANFFERRVGDYQKASVMSSLQNGEKNFVFKLDEDF 348
ISL+GK NFFE+RV +YQ+ +VM+ + VF LD DF
Sbjct: 314 NISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 351
>sp|Q5R9G0|RIR2B_PONAB Ribonucleoside-diphosphate reductase subunit M2 B OS=Pongo abelii
GN=RRM2B PE=2 SV=1
Length = 351
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/342 (60%), Positives = 263/342 (76%), Gaps = 6/342 (1%)
Query: 9 ENEVNQREQGEQE-QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
++E + + E E + ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+
Sbjct: 14 QDERSSSDTNENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 73
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+
Sbjct: 74 DLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACV 186
HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+V FA V
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAV 193
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V
Sbjct: 194 EGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVRE 253
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWME 306
++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLLV LG + + ENPFD+ME
Sbjct: 254 IIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFME 313
Query: 307 FISLQGKANFFERRVGDYQKASVMSSLQNGEKNFVFKLDEDF 348
ISL+GK NFFE+RV +YQ+ +VM+ + VF LD DF
Sbjct: 314 NISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 351
>sp|Q4R741|RIR2B_MACFA Ribonucleoside-diphosphate reductase subunit M2 B OS=Macaca
fascicularis GN=RRM2B PE=2 SV=1
Length = 351
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/328 (62%), Positives = 256/328 (78%), Gaps = 5/328 (1%)
Query: 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKH 81
+ ++EP+L + ++RF +FPI+Y +W+MYK+AQASFWTAEEVDLS+D+ HW +L EK+
Sbjct: 28 KSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKY 87
Query: 82 FISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK 141
FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQI +EN+HSEMYSLL++TYI+
Sbjct: 88 FISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIR 147
Query: 142 DSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFW 200
D K++ LFNAIE +P V +KA WAL WI S F ER+V FA VEGIFFSGSF AIFW
Sbjct: 148 DPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFW 207
Query: 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + ++V ++ +AV+IE +F+
Sbjct: 208 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLT 267
Query: 261 EALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERR 320
EALP LIGMN LM QYI+FVADRLLV LG + + ENPFD+ME ISL+GK NFFE+R
Sbjct: 268 EALPVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKR 327
Query: 321 VGDYQKASVMSSLQNGEKNFVFKLDEDF 348
V +YQ+ +VM+ + VF LD DF
Sbjct: 328 VSEYQRFAVMAETTDN----VFTLDADF 351
>sp|O57175|RIR2_VACCA Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Ankara) GN=MVA032L PE=2 SV=1
Length = 319
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 244/323 (75%), Gaps = 5/323 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQ 325
LIGMN +M YI+FVADRL+ LG ++ YNV NPFD+ME ISL+GK NFFE+RVG+YQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 326 KASVMSSLQNGEKNFVFKLDEDF 348
K VMS N F LD DF
Sbjct: 302 KMGVMSQEDNH-----FSLDVDF 319
>sp|P11158|RIR2_VACCW Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Western Reserve) GN=VACWR043 PE=2 SV=1
Length = 319
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 244/323 (75%), Gaps = 5/323 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQ 325
LIGMN +M YI+FVADRL+ LG ++ YNV NPFD+ME ISL+GK NFFE+RVG+YQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 326 KASVMSSLQNGEKNFVFKLDEDF 348
K VMS N F LD DF
Sbjct: 302 KMGVMSQEDNH-----FSLDVDF 319
>sp|P20493|RIR2_VACCC Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Copenhagen) GN=F4L PE=2 SV=1
Length = 319
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 244/323 (75%), Gaps = 5/323 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQ 325
LIGMN +M YI+FVADRL+ LG ++ YNV NPFD+ME ISL+GK NFFE+RVG+YQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 326 KASVMSSLQNGEKNFVFKLDEDF 348
K VMS N F LD DF
Sbjct: 302 KMGVMSQEDNH-----FSLDVDF 319
>sp|Q6PEE3|RIR2B_MOUSE Ribonucleoside-diphosphate reductase subunit M2 B OS=Mus musculus
GN=Rrm2b PE=1 SV=1
Length = 351
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/348 (59%), Positives = 260/348 (74%), Gaps = 14/348 (4%)
Query: 11 EVNQREQGEQ---------EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAE 61
E + E+GEQ + ++EP+L + ++RF +FPI+Y +W MYK+AQASFWTAE
Sbjct: 8 EAARPEKGEQLCSETEENVVRSNEEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAE 67
Query: 62 EVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQ 121
EVDLS+D+ HW +L EK+FISH+LAFFAASDGIV ENL RF ++Q+PEAR FYGFQ
Sbjct: 68 EVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQ 127
Query: 122 IAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERL 180
I +EN+HSEMYSLL++TYI+D K++ LFNAIE +P V +KA WAL WI S F ER+
Sbjct: 128 ILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERV 187
Query: 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240
V FA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +
Sbjct: 188 VAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPS 247
Query: 241 WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVEN 300
+V ++ +AV+IE +F+ EALP LIGMN LM QYI+FVADRLL LG + + EN
Sbjct: 248 EDRVREIIADAVQIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAEN 307
Query: 301 PFDWMEFISLQGKANFFERRVGDYQKASVMSSLQNGEKNFVFKLDEDF 348
PFD+ME ISL+GK NFFE+RV +YQ+ +VM+ + VF LD DF
Sbjct: 308 PFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 351
>sp|P29883|RIR2_VACCP Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain L-IVP) GN=F14 PE=2 SV=1
Length = 319
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/323 (62%), Positives = 244/323 (75%), Gaps = 5/323 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W ++ EK+FI H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKVTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGF++A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQ 325
LIGMN +M YI+FVADRL+ LG ++ YNV NPFD+ME ISL+GK NFFE+RVG+YQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 326 KASVMSSLQNGEKNFVFKLDEDF 348
K VMS N F LD DF
Sbjct: 302 KMGVMSQKDNH-----FSLDVDF 319
>sp|Q9DHU2|RIR2_YLDV Ribonucleoside-diphosphate reductase small chain OS=Yaba-like
disease virus GN=20L PE=3 SV=1
Length = 325
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/324 (65%), Positives = 251/324 (77%), Gaps = 5/324 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL ++ +FPI Y+ +W+MYKKA ASFWT EEVDLS+D W +L D+EK+FI H
Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKH 65
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFAASDGIV ENLA RF +++QI EAR FYGFQIAMENIHSEMYSLL++TYI DSKE
Sbjct: 66 ILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKE 125
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
K+ LFNAIEN+ CV QKA WA WI S + ++ ERLV FA VEGIFFSGSF AIFW+KKR
Sbjct: 126 KNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKR 185
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264
GLMPGLTFSNELISRDEGLHCDFAC+++ L V ++ EAV IE F+ EA+P
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIP 245
Query: 265 CALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDY 324
LIGMN LM QYI+FVADRLL+ LGC + Y +NPFD+ME ISL+GK NFFE+RV +Y
Sbjct: 246 VKLIGMNCDLMKQYIEFVADRLLLELGCDKYYCSKNPFDFMENISLEGKTNFFEKRVSEY 305
Query: 325 QKASVMSSLQNGEKNFVFKLDEDF 348
QK SVMS+ +K+ VF LD DF
Sbjct: 306 QKMSVMSN----KKDNVFSLDIDF 325
>sp|P09938|RIR2_YEAST Ribonucleoside-diphosphate reductase small chain 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RNR2 PE=1
SV=2
Length = 399
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/331 (61%), Positives = 254/331 (76%), Gaps = 3/331 (0%)
Query: 20 QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDS 78
+E E +EP+L E +R +FPI+Y ++W+ YK+A+ASFWTAEE+DLS+D+ W R+ ++
Sbjct: 70 KEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNEN 129
Query: 79 EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLET 138
E+ FIS VLAFFAASDGIV ENL F ++QIPEA++FYGFQI +ENIHSE YSLL++T
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189
Query: 139 YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCA 197
YIKD KE LFNAI IP + +KA+WAL WI +D+ F ERLV FA +EG+FFSGSF +
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFAS 249
Query: 198 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQ 257
IFWLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ + V +V EAVEIE +
Sbjct: 250 IFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQR 309
Query: 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFF 317
+ +ALP AL+GMN+ LM+QY++FVADRLLVA G ++ Y VENPFD+ME ISL GK NFF
Sbjct: 310 YFLDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFF 369
Query: 318 ERRVGDYQKASVMSSLQNGEKNFVFKLDEDF 348
E+RV DYQKA VMS E F +EDF
Sbjct: 370 EKRVSDYQKAGVMSKSTKQEAG-AFTFNEDF 399
>sp|P33799|RIR2_VAR67 Ribonucleoside-diphosphate reductase small chain OS=Variola virus
(isolate Human/India/Ind3/1967) GN=C8L PE=2 SV=1
Length = 319
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/323 (63%), Positives = 244/323 (75%), Gaps = 5/323 (1%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL + RF +FPI+Y +W MYKKA+ASFWT EEVD+S+D+ W +L EK+FI H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
VLAFFAASDGIV ENLA RF ++QI EAR FYGFQ+A+ENIHSEMYSLL++TY+KDS E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K+ LFNAIE +PCV +KA WA WIH S + ERL+ FA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + V ++ +AV IE +F+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQ 325
LIGMN +M Y++FVADRL+ LG +R YNV NP D+ME ISL+GK NFFE+RVG+YQ
Sbjct: 242 KLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEYQ 301
Query: 326 KASVMSSLQNGEKNFVFKLDEDF 348
K VMS N F LD DF
Sbjct: 302 KMGVMSQEDNH-----FSLDVDF 319
>sp|P50649|RIR2_PLAFG Ribonucleoside-diphosphate reductase small subunit OS=Plasmodium
falciparum (isolate FCR-3 / Gambia) GN=RNR2 PE=3 SV=1
Length = 322
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/323 (62%), Positives = 251/323 (77%), Gaps = 6/323 (1%)
Query: 28 ILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVL 87
IL +++ RF ++PI Y V+ YKKA+A FWTAEE+D S D++ +E+L ++EKHFI HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEKLNENEKHFIKHVL 63
Query: 88 AFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKH 147
AFFAASDGIVLENLA FL ++QI EA+ FY FQIA+ENIHSE YSLL++ YIKD KE+
Sbjct: 64 AFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 148 RLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLM 207
LF+AIENIP V KA WA WI+ ++SFAER+V ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 208 PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA--VEIETQFVCEALPC 265
GLTFSNELISRDEGLH DF CL+YSLL +L Q V ++V EA VE+E F+CE+LPC
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAGGVEVEKSFICESLPC 243
Query: 266 ALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQ 325
LIGMNS LMSQYI+FVADRLL LGC + ++ +NPF+WM+ ISLQGK NFFE+RV DYQ
Sbjct: 244 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 303
Query: 326 KASVMSSLQNGEKNFVFKLDEDF 348
K+ VM+ K+ VF L+ +F
Sbjct: 304 KSGVMAQ----RKDHVFCLNTEF 322
>sp|P36603|RIR2_SCHPO Ribonucleoside-diphosphate reductase small chain
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=suc22 PE=3 SV=2
Length = 391
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/334 (61%), Positives = 255/334 (76%), Gaps = 3/334 (0%)
Query: 18 GEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLD 77
G++E E E +L RF +FPI+Y ++W+ YKKA+ASFWTAEE+DLS+D+ W+ L+
Sbjct: 58 GKKEDELDEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLN 117
Query: 78 S-EKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL 136
+ E++FIS VLA+FAASDGIV ENL RF +++QIPEAR YGFQI +ENIHSE YSLLL
Sbjct: 118 ADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLL 177
Query: 137 ETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSF 195
+TYI++ KEK R F+AI + + KAKWAL WI+ DS +A RLV FA VEGIFFSGSF
Sbjct: 178 DTYIREPKEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSF 237
Query: 196 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255
+IFWLKKRGLMPGLTFSNELI RDEGLH DFACL++S L+ R + V ++ EAV+IE
Sbjct: 238 ASIFWLKKRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKVVEAIIVEAVDIE 297
Query: 256 TQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKAN 315
++ +ALP +L+GMN LM QYI+FVADRLLVALG + YNV NPFD+ME ISL GK N
Sbjct: 298 KEYFTDALPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTN 357
Query: 316 FFERRVGDYQKASVMSSLQNGEK-NFVFKLDEDF 348
FFE++V DYQ A VMS + EK + F +DEDF
Sbjct: 358 FFEKKVSDYQIAGVMSGTKRAEKDDHTFTIDEDF 391
>sp|P42170|RIR2_CAEEL Ribonucleoside-diphosphate reductase small chain OS=Caenorhabditis
elegans GN=rnr-2 PE=3 SV=1
Length = 381
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/339 (58%), Positives = 251/339 (74%), Gaps = 10/339 (2%)
Query: 8 TENEVNQREQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQ 67
E+EVN E + EP+L + + RF +FP+++ +W YKKA ASFWT EEVDL +
Sbjct: 51 NESEVN-------ELDADEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGK 103
Query: 68 DVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENI 127
D+ WE++ E++FIS +LAFFAASDGIV ENL RF N++Q+ EAR FYGFQIA+ENI
Sbjct: 104 DMNDWEKMNGDEQYFISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENI 163
Query: 128 HSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSD-SFAERLVGFACV 186
HSEMYS L+ETYI+D E++ LFNA++ + +KA WAL WI SFAERL+ FA V
Sbjct: 164 HSEMYSKLIETYIRDETERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAV 223
Query: 187 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHH 246
EGIFFSGSF +IFWLKKRGLMPGLT SNELISRDEGLH DFACLLYS L+K+L Q+++
Sbjct: 224 EGIFFSGSFASIFWLKKRGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYD 283
Query: 247 MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWME 306
++ +AV IE +F+ EALP +IGMN LMSQYI+FVAD LLV LGC + Y +NPFD+ME
Sbjct: 284 IIKDAVAIEQEFLTEALPVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYKSKNPFDFME 343
Query: 307 FISLQGKANFFERRVGDYQKASVMSSLQNGEKNFVFKLD 345
IS+ GK NFFE+RV +YQ+ VM + E+ F + D
Sbjct: 344 NISIDGKTNFFEKRVSEYQRPGVM--VNEAERQFDLEAD 380
>sp|Q8SRR2|RIR2_ENCCU Ribonucleoside-diphosphate reductase small chain OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU06_0730 PE=3 SV=1
Length = 325
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/327 (59%), Positives = 251/327 (76%), Gaps = 7/327 (2%)
Query: 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHF 82
E+ E +L + +RF + PI+Y +W+MYKKA++SFWT EEV L +D+ W +L E+HF
Sbjct: 5 EETELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHF 64
Query: 83 ISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 142
IS+VLAFFAASDGIV NL RF ++++ EAR FYGFQ+A+ENIHSEMYSLL++TYI+D
Sbjct: 65 ISYVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRD 124
Query: 143 SKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFFSGSFCAIFWL 201
+ EK+ LF+AI IP V +KA WA+ WI +S FA RLV FACVEGIFFSG+F +IFWL
Sbjct: 125 NDEKNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWL 184
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
KKRGLMPGLTFSNELISRDEGLHC+FACLL+ L+K+ + ++ +V +AVEIE +F+ E
Sbjct: 185 KKRGLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSE 242
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRV 321
+LP LIGMN +LM +YI+FVADRLL LG +R YN NPFD+ME ISL GK NFF++R
Sbjct: 243 SLPVNLIGMNCNLMCRYIEFVADRLLENLGEERVYNATNPFDFMENISLVGKTNFFDKRE 302
Query: 322 GDYQKASVMSSLQNGEKNFVFKLDEDF 348
YQKA V ++NG N F++D DF
Sbjct: 303 SQYQKAFV--GIENG--NDSFRIDVDF 325
>sp|P32209|RIR2_SWPVK Ribonucleoside-diphosphate reductase small chain OS=Swinepox virus
(strain Kasza) GN=C14L PE=3 SV=1
Length = 274
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/269 (63%), Positives = 210/269 (78%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
EPIL E + RF +FPI+Y +W+MYK++ ASFWT EEVDLS+D+ W++L EK+FI H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFFA+SDGIV ENLA RF D+Q EAR FYGFQIAMENIHSEMYSLL++TY++D+ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRG 205
K LFNAIE + CV +KA WA WI S+ + ER+V FA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 206 LMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC 265
LMPGLTFSNELISRDEGLHCDFACL++ L + + ++ +AV IE +F+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 266 ALIGMNSSLMSQYIKFVADRLLVALGCQR 294
LIGMN LMSQYI+FVADRLL LGC++
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTELGCEK 270
>sp|Q9QTF2|RIR2_RSIV Ribonucleoside-diphosphate reductase small chain OS=Red sea bream
iridovirus GN=RR-2 PE=3 SV=1
Length = 312
Score = 343 bits (881), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 169/307 (55%), Positives = 222/307 (72%), Gaps = 9/307 (2%)
Query: 45 QVWEMYKKAQASFWTAEEVDLSQDVQHW-ERLLDSEKHFISHVLAFFAASDGIVLENLAA 103
+W MYKKA ASFWT EEVDLS DV+HW ++L ++E+ F+SH+LAFFA +DGIV +NL
Sbjct: 12 HLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAMADGIVGDNLVC 71
Query: 104 RFLNDI-QIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQK 162
F ++ IPEARAFYGFQ+A+ENIH+EMY+ L+ T + + + LF+A E++PCV K
Sbjct: 72 NFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVA-KENQAALFSAAEDMPCVKAK 130
Query: 163 AKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221
A+WA W++++ A RL+ FA VEG+ FSGSF AIFWLKKR LMPGL FSNELISRDE
Sbjct: 131 AQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGLAFSNELISRDE 190
Query: 222 GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKF 281
GLHCDFAC+L+ + + H ++ +AV+IET F EAL L+GMNS M YI+F
Sbjct: 191 GLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFREALKTPLLGMNSDSMKLYIQF 250
Query: 282 VADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQKASVMSSLQNGEKNFV 341
VADRLL ALG + YNV NPFD+M+ IS++GK NFFERRV +YQ+ V + +
Sbjct: 251 VADRLLDALGYAKMYNVSNPFDFMDNISIEGKTNFFERRVSEYQRMGVFTP-----SSME 305
Query: 342 FKLDEDF 348
F ++E+F
Sbjct: 306 FTMNEEF 312
>sp|Q7T6Y9|RIR2_MIMIV Ribonucleoside-diphosphate reductase small chain OS=Acanthamoeba
polyphaga mimivirus GN=RNR2 PE=3 SV=2
Length = 417
Score = 323 bits (829), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 228/321 (71%), Gaps = 8/321 (2%)
Query: 25 QEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFI 83
+EPIL +++++ + PI+Y++VW+ YK ++WT EEVDL++DV W L D +++FI
Sbjct: 98 KEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFI 157
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
HVLAFFAA+DGIV N+ ++ ++I EA YGFQ AMEN H EMYSL+L T++KD
Sbjct: 158 MHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDD 217
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKK 203
+++L N+I+ +P + +KA W WI S ++A +LV F+ VEG+FFSGSF +IFWLK
Sbjct: 218 ALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWLKT 277
Query: 204 RGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261
R + MPGL SN+ I+RDE H + AC++YSLL RL V+ ++ EA+EIE +F+ +
Sbjct: 278 REMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFIND 337
Query: 262 ALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRV 321
+LPC L+GMNS LMSQYIK+VADRLLV LG ++K+NV+NPF++M+ I + KANFFE+R
Sbjct: 338 SLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFNVDNPFEYMKKIDVFVKANFFEKRN 397
Query: 322 GDYQKASVMSSLQNGEKNFVF 342
Y A++ + EK VF
Sbjct: 398 DAYSNANI-----DNEKKIVF 413
>sp|P49723|RIR4_YEAST Ribonucleoside-diphosphate reductase small chain 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RNR4 PE=1
SV=1
Length = 345
Score = 300 bits (767), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 221/337 (65%), Gaps = 5/337 (1%)
Query: 14 QREQGE-QEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW 72
Q+E+ + +E E E +LME ++RF MFPI+Y ++W YKK +ASFWTAEE++L++D + +
Sbjct: 12 QKERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDF 71
Query: 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMY 132
++L D +K +I ++LA +SD +V + L F +Q PE ++FYGFQI MENI+SE+Y
Sbjct: 72 QKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVY 131
Query: 133 SLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDS-FAERLVGFACVEGIFF 191
S++++ + KD K LF I N+P V KA + WI + DS +AERLV FA EGIF
Sbjct: 132 SMMVDAFFKDPK-NIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQ 190
Query: 192 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEA 251
+G++ ++FWL + +MPGL +N I RD G + DF+CLL++ LR + + + + ++ EA
Sbjct: 191 AGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEA 250
Query: 252 VEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQ 311
VEIE ++ +LP GM+ + YI+FVAD LL G ++ YN NPF++ME ++
Sbjct: 251 VEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATA 310
Query: 312 GKANFFERRVGDYQKASVMSSLQNGEKNFVFKLDEDF 348
GK FFE++V DYQKAS MS K F D+DF
Sbjct: 311 GKTTFFEKKVSDYQKASDMSKSATPSKEINF--DDDF 345
>sp|P0C8I0|RIR2_ASFK5 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-056
PE=3 SV=1
Length = 327
Score = 252 bits (643), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 195/333 (58%), Gaps = 17/333 (5%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIRKMAQWVQQWMDPVKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYLNNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWME--FISLQGKANFFE 318
A + G + ++ QYI++ D L L C+ Y VENPF M F++ K NFFE
Sbjct: 242 DKARGSVPGFSKEMLFQYIRYFTDNLCFMLQCKSIYKVENPFPQMTKFFLNEVEKTNFFE 301
Query: 319 RRVGDYQKASVMSSLQNGEKNFVFKL---DEDF 348
R YQ + F FKL D+DF
Sbjct: 302 LRPTQYQNCV-------KDDAFAFKLFLNDDDF 327
>sp|P26713|RIR2_ASFM2 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Tick/Malawi/Lil 20-1/1983)
GN=Mal-052 PE=3 SV=1
Length = 327
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/333 (40%), Positives = 196/333 (58%), Gaps = 17/333 (5%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ + +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWME--FISLQGKANFFE 318
A + G + ++ QYI++ D L + C+ YNV NPF M F++ K NFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYNVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 319 RRVGDYQKASVMSSLQNGEKNFVFKL---DEDF 348
R YQ + F FKL D+DF
Sbjct: 302 LRPTQYQNCV-------KDDAFAFKLFLDDDDF 327
>sp|P0C8I2|RIR2_ASFWA Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Warthog/Namibia/Wart80/1980)
GN=War-054 PE=3 SV=1
Length = 327
Score = 249 bits (635), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 195/333 (58%), Gaps = 17/333 (5%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ + +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCEAL 263
+MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 264 PCA---LIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWME--FISLQGKANFFE 318
A + G + ++ QYI++ D L + C+ Y V NPF M F++ K NFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 319 RRVGDYQKASVMSSLQNGEKNFVFKL---DEDF 348
R YQ + F FKL D+DF
Sbjct: 302 LRPTQYQNCV-------KDDAFAFKLFLNDDDF 327
>sp|P0C8I1|RIR2_ASFP4 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Tick/South Africa/Pretoriuskop
Pr4/1996) GN=Pret-056 PE=3 SV=1
Length = 327
Score = 247 bits (630), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/337 (39%), Positives = 197/337 (58%), Gaps = 25/337 (7%)
Query: 26 EPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISH 85
E +L+E + RF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + S++ F
Sbjct: 2 EELLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKSQREFYKQ 61
Query: 86 VLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D KE
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 146 KHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLKKR 204
+ R+F+ IE P + + A+W W+ + +S ERLVGFA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 205 GLMPGLTFSNELISRDEGLHCDFACLL-----YSLLRKRLHWQKVHHMVHEAVEIETQFV 259
+MPGL NE ISRDEG+HC FAC L Y++ +R+ +H ++ EAVE+ +F+
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEERI----IHKILKEAVELVDEFI 237
Query: 260 CEALPCA---LIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWME--FISLQGKA 314
A A + G + ++ QYI++ D L + C+ Y V NPF M F++ K
Sbjct: 238 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKT 297
Query: 315 NFFERRVGDYQKASVMSSLQNGEKNFVFKL---DEDF 348
NFFE R YQ + F FKL D+DF
Sbjct: 298 NFFELRPTQYQNCV-------KDDAFAFKLFLNDDDF 327
>sp|P42492|RIR2_ASFB7 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (strain Badajoz 1971 Vero-adapted)
GN=Ba71V-044 PE=3 SV=1
Length = 334
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 195/335 (58%), Gaps = 17/335 (5%)
Query: 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFI 83
+ E +L+E +QRF +FPI++ + W YKK ++ WTA+EVD+ +D+ WE + ++ F
Sbjct: 7 NMEELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFY 66
Query: 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 143
+LAFF +D IV+ENL F+ +I++ E FY Q A E +HSE YS+ ++T I D
Sbjct: 67 KQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDE 126
Query: 144 KEKHRLFNAIENIPCVAQKAKWALDWIHSS-DSFAERLVGFACVEGIFFSGSFCAIFWLK 202
KE+ R+F+ IE P + + A+W W+ ++ ERLVGFA VEGI F F AI +LK
Sbjct: 127 KEQQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLK 186
Query: 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK-VHHMVHEAVEIETQFVCE 261
++ +MPGL NE ISRDEG+HC FAC L S + +K +H ++ EAVE+ +F+
Sbjct: 187 EQNIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINY 246
Query: 262 ALPCA---LIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWME--FISLQGKANF 316
A A + G + ++ QYI++ D L + C+ Y V NPF M F++ K NF
Sbjct: 247 AFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNF 306
Query: 317 FERRVGDYQKASVMSSLQNGEKNFVFKL---DEDF 348
FE R YQ + F FKL D+DF
Sbjct: 307 FELRPTQYQNCV-------KDDAFAFKLFLNDDDF 334
>sp|O84835|RIR2_CHLTR Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=nrdB PE=1 SV=1
Length = 346
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 157/318 (49%), Gaps = 27/318 (8%)
Query: 38 MFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW--ERLLDSEKHFISHVLAFFAASDG 95
+ PI+YK WE Y A+ W E+ + +D++ W +RL + E+ I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAES 90
Query: 96 IVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIEN 155
+V N+ + PEAR + Q E +H+ + + E+ D KE +FNA
Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNE 147
Query: 156 IPCVAQKAKWAL-------------DWIHSSDSFAERLVGFACV-EGIFFSGSFCAIFWL 201
+ K + + D + F + LVG+ + EGIFF F I
Sbjct: 148 RAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH--W-----QKVHHMVHEAVEI 254
++ M G+ + I RDE +H +F L + +++ W Q++ ++ AV++
Sbjct: 208 HRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDL 267
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWM-EFISLQGK 313
E ++ + LP ++G+ +S+ Y++ +ADR L +G + Y+ +NPF WM E I L +
Sbjct: 268 EIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKE 327
Query: 314 ANFFERRVGDYQKASVMS 331
NFFE RV +YQ A+ ++
Sbjct: 328 KNFFETRVIEYQHAASLT 345
>sp|Q9PL92|RIR2_CHLMU Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=nrdB PE=3 SV=1
Length = 346
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 155/318 (48%), Gaps = 27/318 (8%)
Query: 38 MFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER--LLDSEKHFISHVLAFFAASDG 95
+ PI+YK WE Y A+ W E+ + +D++ W+ L + E+ I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEISMGKDIELWKSNVLSEDERRVILLNLGFFSTAES 90
Query: 96 IVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIEN 155
+V N+ + PEAR + Q E +H+ + + E+ D KE +FNA
Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNE 147
Query: 156 IPCVAQKAKWAL-------------DWIHSSDSFAERLVGFACV-EGIFFSGSFCAIFWL 201
+ K + + D + F + LVG+ + EGIFF F I
Sbjct: 148 RASIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFIKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH--W-----QKVHHMVHEAVEI 254
++ M G+ + I RDE +H +F L + +++ W Q++ M+ AV++
Sbjct: 208 HRQNKMVGIGEQYQYILRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDL 267
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWM-EFISLQGK 313
E + + LP ++G+ +S+ Y++ +ADR L +G + Y+ +NPF WM E I L +
Sbjct: 268 EIDYARDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKE 327
Query: 314 ANFFERRVGDYQKASVMS 331
NFFE RV +YQ A+ ++
Sbjct: 328 KNFFETRVTEYQHAASLT 345
>sp|Q9Z6S4|RIR2_CHLPN Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
pneumoniae GN=nrdB PE=3 SV=1
Length = 346
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 157/318 (49%), Gaps = 27/318 (8%)
Query: 38 MFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHW--ERLLDSEKHFISHVLAFFAASDG 95
+ PI+YK WE Y A+ W EV +++D++ W + L + E+ I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAES 90
Query: 96 IVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIEN 155
+V N+ I PEAR + Q E +H+ + + E+ D E +FNA
Sbjct: 91 LVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEGE---VFNAYNE 147
Query: 156 IPCVAQKAKWALDW----------IHSSDS---FAERLVGFACV-EGIFFSGSFCAIFWL 201
+ K + + + SS+ F + LVG+ + EGIFF F I
Sbjct: 148 RASIRAKDDFQMTLTVDVLDPNFSVQSSEGLGQFIKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 202 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH--W-----QKVHHMVHEAVEI 254
++ M G+ + I RDE +H +F L + +++ W +++ ++ +AVE+
Sbjct: 208 HRQNKMTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVEL 267
Query: 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWM-EFISLQGK 313
E ++ + LP ++G+ SS+ Y++ +ADR L +G + Y+ NPF WM E + L +
Sbjct: 268 EIEYAKDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIYHSRNPFPWMSETMDLNKE 327
Query: 314 ANFFERRVGDYQKASVMS 331
NFFE RV +YQ A +S
Sbjct: 328 KNFFETRVTEYQTAGNLS 345
>sp|Q6R7K3|RIR2_OSHVF Ribonucleoside-diphosphate reductase small chain OS=Ostreid
herpesvirus 1 (isolate France) GN=ORF20 PE=3 SV=1
Length = 579
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 15/307 (4%)
Query: 40 PIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLE 99
P Y+Q+ + K ++S W E+D D+ WE++ ++E+ + VLAFFA D +V +
Sbjct: 76 PAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKD 135
Query: 100 NLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCV 159
+A F ++ +PE + F +Q E +H +Y+ L+ +KD L NA ++
Sbjct: 136 RIAI-FADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFA 194
Query: 160 AQKAKWALDWIHS-----SDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 214
K K +DW+ +DS E +VG C E I F+ SF AI + M L N
Sbjct: 195 PIKKK--VDWLGKIISVENDSRGEMVVGQVCTEAIMFAASF-AILLKFRAPYMRALVLGN 251
Query: 215 ELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSL 274
E I RDE LH F L L+ R +++ ++ EA EIE +F +P + +
Sbjct: 252 EFIRRDETLHFRFYAELLRLMPDRPSDERIAELLTEATEIELEFAEYVVPEGVKYITKDR 311
Query: 275 MSQYIKFVADRLLVALGCQRKY-----NV-ENPFDWMEFISLQGKANFFERRVGDYQKAS 328
+ Q++K +++ L Y NV +P +M + + K NFFE + +Y
Sbjct: 312 LIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNTLESEQKINFFEGKATEYNTKQ 371
Query: 329 VMSSLQN 335
N
Sbjct: 372 YKVDFNN 378
>sp|Q4JQV7|RIR2_VZVO Ribonucleoside-diphosphate reductase small chain
OS=Varicella-zoster virus (strain Oka vaccine) GN=ORF18
PE=1 SV=1
Length = 306
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 7/280 (2%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W + + D Q+ + L + E F + F +A+D +V NL + + +
Sbjct: 30 WLESDFIIEDDYQYLDCLTEDELIFYRFIFTFLSAADDLVNVNLGS-LTQLFSQKDIHHY 88
Query: 118 YGFQIAMENIHSEMYSLL-LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q +E +H+ +YS + L + D + + N N P + QK +W + + + S
Sbjct: 89 YIEQECIEVVHARVYSQIQLMLFRGDESLRVQYVNVTINNPSIQQKVQWLEEKVRDNPSV 148
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLL 235
AE+ + +EGIFF SF AI +L+ GL N+LISRDE +H +C +Y + +
Sbjct: 149 AEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRDEAIHTSASCCIYNNYV 208
Query: 236 RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRK 295
++ ++H + EAVEIE F+ P + +N ++QY+KF ADRLL A+ +
Sbjct: 209 PEKPAITRIHQLFSEAVEIECAFLKSHAPKTRL-VNVDAITQYVKFSADRLLSAINVPKL 267
Query: 296 YNVENP-FDW-MEFISLQGKANFFERRVGDYQKASVMSSL 333
+N P D+ + F+ NFFER Y +V++ L
Sbjct: 268 FNTPPPDSDFPLAFMIADKNTNFFERHSTSY-AGTVINDL 306
>sp|P09247|RIR2_VZVD Ribonucleoside-diphosphate reductase small chain
OS=Varicella-zoster virus (strain Dumas) GN=ORF18 PE=3
SV=1
Length = 306
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 7/280 (2%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W + + D Q+ + L + E F + F +A+D +V NL + + +
Sbjct: 30 WLESDFIIEDDYQYLDCLTEDELIFYRFIFTFLSAADDLVNVNLGS-LTQLFSQKDIHHY 88
Query: 118 YGFQIAMENIHSEMYSLL-LETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q +E +H+ +YS + L + D + + N N P + QK +W + + + S
Sbjct: 89 YIEQECIEVVHARVYSQIQLMLFRGDESLRVQYVNVTINNPSIQQKVQWLEEKVRDNPSV 148
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLL 235
AE+ + +EGIFF SF AI +L+ GL N+LISRDE +H +C +Y + +
Sbjct: 149 AEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRDEAIHTSASCCIYNNYV 208
Query: 236 RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRK 295
++ ++H + EAVEIE F+ P + +N ++QY+KF ADRLL A+ +
Sbjct: 209 PEKPAITRIHQLFSEAVEIECAFLKSHAPKTRL-VNVDAITQYVKFSADRLLSAINVPKL 267
Query: 296 YNVENP-FDW-MEFISLQGKANFFERRVGDYQKASVMSSL 333
+N P D+ + F+ NFFER Y +V++ L
Sbjct: 268 FNTPPPDSDFPLAFMIADKNTNFFERHSTSY-AGTVINDL 306
>sp|P0C701|RIR2_EBVG Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr
virus (strain GD1) GN=BaRF1 PE=1 SV=1
Length = 302
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 11/275 (4%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W A + L++D + L + + F + F A ++ +V N+ + + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNID-ELVTSFESHDIDHY 83
Query: 118 YGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF-NAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q AMEN+H E Y+ +L + + AI + K W D + ++ +
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL- 235
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 236 ----RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALG 291
R R W + + AVE+ET F+ EA + ++ + Q+++ ADR+L +G
Sbjct: 204 AKADRPRATW--IQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIG 260
Query: 292 CQRKYNVENPFDW-MEFISLQGKANFFERRVGDYQ 325
Y P D + +++ + NFFE+ DY
Sbjct: 261 QAPLYGTPPPKDCPLTYMTSIKQTNFFEQESSDYT 295
>sp|P0CAP6|RIR2_EBVB9 Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr
virus (strain B95-8) GN=BaRF1 PE=1 SV=1
Length = 302
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 11/275 (4%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W A + L++D + L + + F + F A ++ +V N+ + + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNID-ELVTSFESHDIDHY 83
Query: 118 YGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF-NAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q AMEN+H E Y+ +L + + AI + K W D + ++ +
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL- 235
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 236 ----RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALG 291
R R W + + AVE+ET F+ EA + ++ + Q+++ ADR+L +G
Sbjct: 204 AKADRPRATW--IQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIG 260
Query: 292 CQRKYNVENPFDW-MEFISLQGKANFFERRVGDYQ 325
Y P D + +++ + NFFE+ DY
Sbjct: 261 QAPLYGTPPPKDCPLTYMTSIKQTNFFEQESSDYT 295
>sp|P0CAP7|RIR2_EBVA8 Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr
virus (strain AG876) GN=BaRF1 PE=3 SV=1
Length = 302
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 11/275 (4%)
Query: 58 WTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAF 117
W A + L++D + L + + F + F A ++ +V N+ + + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNID-ELVTSFESHDIDHY 83
Query: 118 YGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF-NAIENIPCVAQKAKWALDWIHSSDSF 176
Y Q AMEN+H E Y+ +L + + AI + K W D + ++ +
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL- 235
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 236 ----RKRLHWQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALG 291
R R W + + AVE+ET F+ EA + ++ + Q+++ ADR+L +G
Sbjct: 204 AKADRPRATW--IQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIG 260
Query: 292 CQRKYNVENPFDW-MEFISLQGKANFFERRVGDYQ 325
Y P D + +++ + NFFE+ DY
Sbjct: 261 QAPLYGTPPPKDCPLTYMTSIKQTNFFEQESSDYT 295
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,942,250
Number of Sequences: 539616
Number of extensions: 5010417
Number of successful extensions: 19228
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 18947
Number of HSP's gapped (non-prelim): 147
length of query: 348
length of database: 191,569,459
effective HSP length: 118
effective length of query: 230
effective length of database: 127,894,771
effective search space: 29415797330
effective search space used: 29415797330
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)