Query 018964
Match_columns 348
No_of_seqs 133 out of 1123
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 08:46:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018964.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018964hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p1i_A Ribonucleotide reductas 100.0 1.3E-86 4.5E-91 640.5 25.3 321 24-348 29-349 (349)
2 1jk0_B RNR Y4, ribonucleoside- 100.0 2.5E-87 8.6E-92 644.6 18.4 330 16-348 15-345 (345)
3 1h0o_A Ribonucleoside-diphosph 100.0 5E-85 1.7E-89 635.7 32.8 324 21-348 66-390 (390)
4 1jk0_A RNR Y2, ribonucleoside- 100.0 5.6E-85 1.9E-89 638.9 27.1 331 17-348 87-419 (419)
5 3olj_A Ribonucleoside-diphosph 100.0 1.7E-79 5.9E-84 576.7 30.3 283 23-305 3-286 (286)
6 1syy_A Ribonucleoside-diphosph 100.0 7.9E-79 2.7E-83 587.0 33.1 306 22-330 14-344 (346)
7 4a58_A Ribonucleoside-diphosph 100.0 1.1E-78 3.7E-83 579.6 26.8 300 22-327 12-319 (324)
8 2rcc_A Ribonucleoside-diphosph 100.0 1.1E-77 3.7E-82 579.3 31.7 306 24-331 18-341 (346)
9 1mxr_A Ribonucleotide reductas 100.0 4.1E-77 1.4E-81 580.5 34.4 309 22-333 11-365 (375)
10 2o1z_A Ribonucleotide reductas 100.0 1.1E-77 3.8E-82 570.1 28.9 286 21-306 25-310 (311)
11 3n37_A Ribonucleoside-diphosph 100.0 2.2E-74 7.4E-79 549.8 33.2 295 33-333 6-313 (319)
12 4dr0_A Ribonucleoside-diphosph 100.0 1.5E-74 5.1E-79 556.1 31.4 304 31-344 24-343 (350)
13 3dhz_A Ribonucleotide reductas 100.0 6.7E-74 2.3E-78 548.3 32.4 294 34-333 17-323 (329)
14 3mjo_A Ribonucleotide reductas 100.0 5.8E-67 2E-71 493.5 32.2 261 33-298 15-282 (296)
15 3ee4_A Probable ribonucleoside 100.0 1.8E-60 6.1E-65 453.9 24.5 264 23-298 12-294 (323)
16 2inc_A Toluene, O-xylene monoo 98.2 0.0001 3.6E-09 73.2 20.8 222 71-295 80-313 (491)
17 1mty_D Methane monooxygenase h 97.9 0.0011 3.7E-08 66.1 20.7 165 71-238 77-246 (512)
18 3ge3_A Toluene-4-monooxygenase 97.6 0.0013 4.5E-08 65.2 16.2 219 71-295 81-314 (500)
19 2uw1_A Desaturase, plastid del 97.6 0.014 4.7E-07 54.9 21.0 164 56-240 35-223 (338)
20 2inc_B Toluene, O-xylene monoo 97.5 0.022 7.5E-07 53.6 22.2 210 72-291 103-322 (322)
21 3pvt_A Phenylacetic acid degra 97.4 0.032 1.1E-06 52.0 21.9 203 75-295 25-243 (311)
22 1mhy_B Methane monooxygenase h 97.1 0.082 2.8E-06 50.9 21.1 164 71-236 135-306 (395)
23 3u52_C Phenol hydroxylase comp 96.9 0.27 9.3E-06 46.2 22.3 210 72-294 108-328 (333)
24 3ge3_B Toluene-4-monooxygenase 96.8 0.086 2.9E-06 49.6 18.2 165 72-238 107-275 (327)
25 3u52_A Phenol hydroxylase comp 96.8 0.1 3.4E-06 52.0 19.4 211 72-295 86-318 (511)
26 1za0_A Possible acyl-[acyl-car 96.6 0.035 1.2E-06 50.9 13.7 169 54-243 28-211 (275)
27 1mty_B Methane monooxygenase h 96.5 0.037 1.3E-06 53.2 13.9 164 71-236 127-298 (384)
28 3chh_A P-aminobenzoate N-oxyge 95.7 1.2 4.2E-05 41.8 19.5 172 56-241 58-247 (336)
29 2oc5_A Hypothetical protein; D 95.7 0.92 3.1E-05 39.0 21.2 199 76-294 28-231 (244)
30 3pf7_A Benzoyl-COA oxygenase c 94.9 0.23 7.8E-06 48.0 11.7 151 71-237 97-256 (481)
31 1zpy_A Hypothetical protein NE 90.8 4.1 0.00014 30.9 10.9 68 73-145 11-78 (95)
32 1rcw_A CT610, CADD; iron, DI-i 86.7 15 0.0005 31.7 20.7 200 48-264 11-220 (231)
33 3bjd_A Putative 3-oxoacyl-(acy 86.1 21 0.00073 33.1 15.9 152 104-263 162-323 (332)
34 3qhb_A Symerythrin, ORF180; fo 80.8 25 0.00085 29.7 12.3 123 104-236 49-176 (179)
35 3k6c_A Uncharacterized protein 80.6 16 0.00056 27.5 10.9 67 73-144 11-77 (95)
36 1otk_A Protein PAAC, phenylace 73.5 49 0.0017 29.4 19.5 171 105-293 26-210 (249)
37 1za0_A Possible acyl-[acyl-car 68.6 26 0.0009 31.7 9.4 42 103-144 167-209 (275)
38 3b5o_A CADD-like protein of un 61.4 87 0.003 27.7 14.7 139 112-260 72-223 (244)
39 3k6c_A Uncharacterized protein 61.0 31 0.0011 26.0 6.9 55 175-235 19-74 (95)
40 3dde_A TENA/THI-4 protein, dom 60.9 81 0.0028 27.2 17.0 147 107-261 64-216 (239)
41 1zpy_A Hypothetical protein NE 59.2 39 0.0013 25.5 7.2 55 175-235 19-74 (95)
42 1yuz_A Nigerythrin; rubrythrin 57.7 89 0.003 26.6 13.1 113 105-237 53-165 (202)
43 2fzf_A Hypothetical protein; s 56.7 79 0.0027 25.7 14.6 118 103-237 40-163 (175)
44 3pwf_A Rubrerythrin; non heme 56.2 86 0.0029 26.0 13.6 100 103-236 29-128 (170)
45 2uw1_A Desaturase, plastid del 52.9 70 0.0024 29.8 9.4 37 104-140 183-219 (338)
46 2a2m_A Hypothetical protein BT 50.9 1.3E+02 0.0045 26.5 16.1 142 106-264 106-250 (258)
47 2qcx_A Transcriptional activat 48.8 1.4E+02 0.0048 26.3 21.8 150 105-264 85-241 (263)
48 2hz8_A De novo designed DIIRON 48.6 32 0.0011 26.9 5.4 56 200-259 53-108 (115)
49 4am5_A Bacterioferritin; metal 46.8 79 0.0027 25.4 8.1 92 170-262 1-101 (159)
50 3uoi_A Bacterioferritin, BFR; 46.3 93 0.0032 24.7 8.4 92 170-262 3-103 (161)
51 1o9i_A Pseudocatalase; oxidore 45.6 1.3E+02 0.0044 27.0 9.7 71 54-139 122-192 (266)
52 3uno_A Probable bacterioferrit 43.5 92 0.0031 26.2 8.1 60 200-260 35-104 (189)
53 2v8t_A Manganese-containing ps 42.9 1.4E+02 0.0049 27.2 9.7 71 54-139 129-199 (302)
54 1nfv_A Bacterioferritin; 24 su 42.3 1.4E+02 0.0046 24.2 13.7 107 110-236 41-147 (179)
55 3oj5_A Ferritin family protein 40.1 1.1E+02 0.0038 25.3 8.1 59 201-260 36-104 (189)
56 1o9i_A Pseudocatalase; oxidore 39.8 2E+02 0.0068 25.7 10.0 120 109-236 49-193 (266)
57 4di0_A Rubrerythrin; ssgcid, s 38.2 1.5E+02 0.0052 23.6 13.1 105 104-233 36-140 (144)
58 2fzf_A Hypothetical protein; s 37.4 1.6E+02 0.0056 23.7 8.8 55 84-139 107-161 (175)
59 1j30_A 144AA long hypothetical 36.3 1.6E+02 0.0053 23.2 14.2 105 107-236 35-141 (144)
60 3oql_A TENA homolog; transcrip 36.2 2.3E+02 0.0079 25.1 14.1 201 44-263 20-245 (262)
61 3e6s_A Ferritin; iron storage, 35.6 1.6E+02 0.0055 24.0 8.3 61 199-260 28-100 (168)
62 1yuz_A Nigerythrin; rubrythrin 33.4 1.4E+02 0.0049 25.3 7.8 59 201-259 53-120 (202)
63 3gvy_A Bacterioferritin; iron 32.7 1.8E+02 0.0062 22.9 8.9 58 203-260 33-99 (161)
64 3hl1_A Ferritin like protein; 32.0 90 0.0031 28.7 6.5 40 197-238 32-71 (317)
65 1vlg_A Ferritin; TM1128, struc 29.7 2.1E+02 0.0071 23.2 8.1 59 201-260 45-113 (176)
66 3bvf_A Ferritin; iron storage, 28.7 2.2E+02 0.0074 23.4 8.0 57 204-260 47-113 (181)
67 3qb9_A Bacterioferritin, BFR; 28.3 2.3E+02 0.0078 22.6 8.4 92 170-262 3-103 (174)
68 3fvb_A Bacterioferritin; niaid 27.3 2.3E+02 0.0079 23.1 8.0 89 173-262 25-122 (182)
69 1nfv_A Bacterioferritin; 24 su 26.3 97 0.0033 25.2 5.4 57 204-260 39-104 (179)
70 2gm8_A TENA homolog/THI-4 thia 26.0 3E+02 0.01 23.2 18.2 144 105-263 66-218 (221)
71 3ez0_A Uncharacterized protein 25.3 3.4E+02 0.012 23.6 19.5 198 77-293 10-224 (225)
72 1s3q_A Ferritin; ferroxidase, 24.3 2.9E+02 0.0098 22.5 8.4 59 201-260 33-101 (173)
73 2qzc_A Transcriptional activat 22.5 3.4E+02 0.012 22.6 16.6 136 107-263 64-207 (214)
74 2y3q_A Bacterioferritin; metal 22.4 2.7E+02 0.0093 21.5 8.0 58 203-260 33-99 (158)
75 2itb_A TRNA-(MS(2)IO(6)A)-hydr 21.0 3.9E+02 0.013 22.9 8.1 56 81-140 111-167 (206)
76 2y3q_A Bacterioferritin; metal 20.7 3E+02 0.01 21.3 14.6 109 108-236 34-142 (158)
No 1
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=100.00 E-value=1.3e-86 Score=640.51 Aligned_cols=321 Identities=64% Similarity=1.112 Sum_probs=253.1
Q ss_pred cCccccccCCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 018964 24 DQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAA 103 (348)
Q Consensus 24 ~~e~il~~~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~ 103 (348)
.+||||+||+.|++++|++|||+|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|++++++
T Consensus 29 ~~e~ll~~n~~r~~~~p~kY~~~~~ly~k~~~nfW~peEIdls~D~~dw~~Lt~~Er~~~~~~l~~~~~~D~iv~~~l~~ 108 (349)
T 2p1i_A 29 SNEKILNKESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKHVLAFFAASDGIVLENLAS 108 (349)
T ss_dssp ------------------CCHHHHHHHHHHHTTCCCGGGTCGGGCSHHHHHSCTTTHHHHHHHHHHHTTC-----CCCHH
T ss_pred ccCccccCCCcccccCCCcchHHHHHHHHHHHcCCchhhcCccccHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 018964 104 RFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGF 183 (348)
Q Consensus 104 ~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~ 183 (348)
.+++.++.||+++|+++|+++|+||+++||+|+++++.||++++++|+++.++|+|++|++|+.++++++.+++++++++
T Consensus 109 ~l~~~v~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~lva~ 188 (349)
T 2p1i_A 109 KFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVAN 188 (349)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHTTHHHHSCHHHHHHHHHHHHTSSCSSCHHHHHHHH
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 99999999999999999999999999999999999988999999999999999999999999999998777899999999
Q ss_pred HHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc
Q 018964 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEAL 263 (348)
Q Consensus 184 ~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~~~~~~ 263 (348)
+++|||+|||||+++++|+++|+|||++++|++|+|||++|+.|++.+++.++.++++++|++++++||++|++|+.+++
T Consensus 189 ~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~~~~~~~v~~l~~eave~E~~~~~~~l 268 (349)
T 2p1i_A 189 ACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPENVVQNIVKEAVEVERSFICESL 268 (349)
T ss_dssp HHHTTTTTHHHHHHHHHHHTTTCSTTHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999889
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcchhhhcccccCCCcccccccccccccccccccCCCcccccc
Q 018964 264 PCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQKASVMSSLQNGEKNFVFK 343 (348)
Q Consensus 264 ~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~~nP~~w~~~~~~~~~~nFFE~~~t~Y~~~~~~~~~~~~~~~~~~~ 343 (348)
|.+++||+.+++++||+|+||+||.+||++|+|++.||+|||+.++..+|+||||+++++|+|++++... .+.+|+
T Consensus 269 ~~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~y~~~nP~~wm~~~~~~~k~nFFe~r~~~Y~k~~~~~~~----~~~~~~ 344 (349)
T 2p1i_A 269 PCDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNWMDLISLQGKTNFFEKRVADYQKSGVMAQR----KEQVFS 344 (349)
T ss_dssp CSTTTTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCSCCC---------------------------------------
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCChHHHHHhcccccCCcccCCccccccccccccC----CCCeee
Confidence 9999999999999999999999999999999999999999999988888899999999999999877654 277899
Q ss_pred cCCCC
Q 018964 344 LDEDF 348 (348)
Q Consensus 344 ~~~df 348 (348)
|||||
T Consensus 345 ~~~~f 349 (349)
T 2p1i_A 345 LNTDF 349 (349)
T ss_dssp -----
T ss_pred cCCCC
Confidence 99998
No 2
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=100.00 E-value=2.5e-87 Score=644.62 Aligned_cols=330 Identities=43% Similarity=0.805 Sum_probs=252.1
Q ss_pred hhcccccccCccccccCCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHH
Q 018964 16 EQGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDG 95 (348)
Q Consensus 16 ~~~~~~~~~~e~il~~~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~ 95 (348)
+.++.+.+.++|||+||+.|++++|++|||+|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|+
T Consensus 15 ~~~~~~~~~~e~ll~~n~~r~~~~p~kY~~~~~ly~k~~~nfW~peEI~ls~D~~dw~~Lt~~Er~~~~~~l~~~~~~D~ 94 (345)
T 1jk0_B 15 RHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGNLLALSISSDN 94 (345)
T ss_dssp HHHHHHHTTTCTTTSCCTTCCSCCSCSCHHHHHHHHHHHHTCCCGGGCCCTTTSTTTTTSCTTHHHHHHHHHHHHC----
T ss_pred hHhhhhhhhcCchhcCCCcccccCCCcchHHHHHHHHHHHcCCChhhcChhhhHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 66788888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcC-ch
Q 018964 96 IVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SD 174 (348)
Q Consensus 96 ~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~-~~ 174 (348)
+|++++.+.+++.++.||+++|+++|+++|+||+++||+|+++++.|++++ ++|+++.++|+|++|++|+.+++++ +.
T Consensus 95 iv~~nl~~~l~~~v~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~~~~e~-~~f~~~~~~p~l~~K~~~i~~~~~~~~~ 173 (345)
T 1jk0_B 95 LVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNI-PLFKEIANLPEVKHKAAFIERWISNDDS 173 (345)
T ss_dssp -----CHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTS-CSGGGGCSCHHHHHHHHHHHHTTSSSSC
T ss_pred HHHHhhHHHHHHHCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH-HHHHHHhhCHHHHHHHHHHHHHHhCCcH
Confidence 999999989999999999999999999999999999999999998788888 8999999999999999999999974 56
Q ss_pred HHHHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 018964 175 SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254 (348)
Q Consensus 175 ~~~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~ 254 (348)
++++++++++++|||+|||||+++++|+++|+|||++++|++|+|||++|+.|++.+++.++.++++++|++++++||++
T Consensus 174 ~~~~~lva~~~lEgi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~~~v~~l~~eave~ 253 (345)
T 1jk0_B 174 LYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEI 253 (345)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcchhhhcccccCCCccccccccccccccccccc
Q 018964 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQKASVMSSLQ 334 (348)
Q Consensus 255 E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~~nP~~w~~~~~~~~~~nFFE~~~t~Y~~~~~~~~~~ 334 (348)
|++|+.++++++++||+.+++++||+|+||+||.+||++|+|++.||+|||+.++..+|+||||+++++|+|++++.+..
T Consensus 254 E~~~~~~~l~~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~y~~~nP~~wm~~~~~~~k~nFFe~r~~~Y~~~~~~~~~~ 333 (345)
T 1jk0_B 254 EKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSDYQKASDMSKSA 333 (345)
T ss_dssp HHHHHTTSCC-----------CTHHHHHHHHHHHHTTCCCCC--------------------------------------
T ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHhcccccCccccCCcchhhccccccccc
Confidence 99999999999999999999999999999999999999999999999999999887788999999999999998776542
Q ss_pred CCCcccccccCCCC
Q 018964 335 NGEKNFVFKLDEDF 348 (348)
Q Consensus 335 ~~~~~~~~~~~~df 348 (348)
..+.+|+|||||
T Consensus 334 --~~~~~~~~~~~f 345 (345)
T 1jk0_B 334 --TPSKEINFDDDF 345 (345)
T ss_dssp --------------
T ss_pred --CCCceeecCCCC
Confidence 126789999998
No 3
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=100.00 E-value=5e-85 Score=635.74 Aligned_cols=324 Identities=65% Similarity=1.127 Sum_probs=277.6
Q ss_pred ccccCccccccCCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhh
Q 018964 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLEN 100 (348)
Q Consensus 21 ~~~~~e~il~~~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~ 100 (348)
..+.+||||+||+.|++++|++|||+|++|+++.++||.|+|||+++|+.||++||+.||++++++|++|+++|++|+++
T Consensus 66 ~~~~~e~ll~~n~~r~~l~PikY~~~~~ly~k~~~nfW~peEIdls~D~~dw~~Lt~~Er~~~~~vla~fa~~Dsiv~~n 145 (390)
T 1h0o_A 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNEN 145 (390)
T ss_dssp CSCTTCTTTSSCCSCCCSSSCSCHHHHHHHHHHHHTCCCGGGSCCTTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcccccCCCcccccCCCCCHHHHHHHHHHHHcCCchhhcchhccHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcC-chHHHHH
Q 018964 101 LAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAER 179 (348)
Q Consensus 101 l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~-~~~~~~~ 179 (348)
+.+.|++.++.||+++|+++|+++|+||+++||+|+++++.|+.+++++|+++.++|+|++|++|+.+++++ +.+++++
T Consensus 146 l~~~~~~~v~~pE~~~~~~~Q~~~EaiHsesYS~il~tl~~d~~e~~~if~~~~~~p~l~~Ka~~i~~~~~~~~~~~~~~ 225 (390)
T 1h0o_A 146 LVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGER 225 (390)
T ss_dssp HHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHTHHHHCHHHHHHHHHHHHHHHCSSSCHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccchhHHHH
Confidence 998899999999999999999999999999999999999989999999999999999999999999999974 4579999
Q ss_pred HHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 018964 180 LVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259 (348)
Q Consensus 180 lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~~ 259 (348)
+++++++|||+|||||+++++|+++|+|||++++|++|+|||++|+.|++.+++.+..++++++|++++.+||++|++|+
T Consensus 226 lva~~~lEGi~Fys~F~~~~~l~~rg~MpG~~~~i~lI~RDE~lH~~f~~~l~~~l~~~~~~~~v~el~~eave~E~~~~ 305 (390)
T 1h0o_A 226 VVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 305 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcchhhhcccccCCCcccccccccccccccccccCCCcc
Q 018964 260 CEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQKASVMSSLQNGEKN 339 (348)
Q Consensus 260 ~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~~nP~~w~~~~~~~~~~nFFE~~~t~Y~~~~~~~~~~~~~~~ 339 (348)
.+++|.+++||+.+++++||+|+||++|.+||++|+|++.||+|||+.++..+|+||||+++++|+|++++... .+
T Consensus 306 ~~~~~~~~iGl~~~~~~~YI~y~Anr~L~~LG~~~~y~~~NP~~wm~~~s~~~ktnFFE~r~t~Y~k~~~~~~~----~~ 381 (390)
T 1h0o_A 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSNS----TE 381 (390)
T ss_dssp HTTSCGGGGTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCSCGGGC---------------------------------
T ss_pred HHhccCCcCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCChHHHHhhcccccCccccCCccccccccccccC----cC
Confidence 99999999999999999999999999999999999999999999999988888899999999999999877653 27
Q ss_pred cccccCCCC
Q 018964 340 FVFKLDEDF 348 (348)
Q Consensus 340 ~~~~~~~df 348 (348)
.+|+|||||
T Consensus 382 ~~~~~~~~f 390 (390)
T 1h0o_A 382 NSFTLDADF 390 (390)
T ss_dssp ---------
T ss_pred ceeecCCCC
Confidence 789999999
No 4
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=100.00 E-value=5.6e-85 Score=638.93 Aligned_cols=331 Identities=60% Similarity=1.050 Sum_probs=282.6
Q ss_pred hcccccccCccccccCCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHh-cCCHHHHHHHHHHHHHHHHHHH
Q 018964 17 QGEQEQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE-RLLDSEKHFISHVLAFFAASDG 95 (348)
Q Consensus 17 ~~~~~~~~~e~il~~~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~-~L~~~er~~~~~~la~l~~~d~ 95 (348)
.++.+.+.+||||++|+.|++++|++|||+|++|+++.++||+|+|||+++|+.||+ +||+.||++++++|++|+++|+
T Consensus 87 ~~~~~~~~~e~ll~~n~~r~~l~PikY~~~~~lykk~~anfW~peEIdls~D~~dw~~~Lt~~Er~~~~~vLa~fa~~Ds 166 (419)
T 1jk0_A 87 HKLKEMEKEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFISRVLAFFAASDG 166 (419)
T ss_dssp HHHHHHGGGCGGGSCCTTCCSCCSCSCHHHHHHHHHHHTTCCCGGGCCCTTHHHHHHHTCCHHHHHHHHHHHHHHHTTSS
T ss_pred hhhhhhhhhCccccCCccccccCCcCcHHHHHHHHHHHHcCCchhhcchhccHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 477888999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcC-ch
Q 018964 96 IVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SD 174 (348)
Q Consensus 96 ~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~-~~ 174 (348)
+|++++.+.|++.++.||+++|+++|+++|+||+++||+|+++++.||.+++++|+++.++|+|++|++|+.+++++ +.
T Consensus 167 iv~~nl~~~l~~~v~~pE~~~~~~~Q~~~EaIHsesYS~il~tl~~d~~e~~~iF~~i~~~p~L~~Ka~~i~~~~~~~~~ 246 (419)
T 1jk0_A 167 IVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADA 246 (419)
T ss_dssp HHHHHHCCCCCTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHhccch
Confidence 99999988899999999999999999999999999999999999989999999999999999999999999999975 55
Q ss_pred HHHHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 018964 175 SFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEI 254 (348)
Q Consensus 175 ~~~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~ 254 (348)
++++++++++++|||+|+|||+++++|+++|+|||++++|++|+|||++|+.|++.+++.+.+++++++|++++++||++
T Consensus 247 ~~~~~lva~~~lEGI~fsg~Fa~~~~l~~rg~MpG~~~~i~lI~RDE~lH~~f~~~l~~~l~~~~~~e~v~el~~eave~ 326 (419)
T 1jk0_A 247 LFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEI 326 (419)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcchhhhcccccCCCccccccccccccccccccc
Q 018964 255 ETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWMEFISLQGKANFFERRVGDYQKASVMSSLQ 334 (348)
Q Consensus 255 E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~~nP~~w~~~~~~~~~~nFFE~~~t~Y~~~~~~~~~~ 334 (348)
|++|+.+++|++++||+.+++++||+|+||++|++||++|+|++.||+|||+.++..+++||||+++++|+|++++...
T Consensus 327 E~~~~~~~lp~~liGln~~~~~~YI~Y~Anr~L~~LG~~~~y~~~NP~~wm~~is~~~ktnFFE~r~t~Y~k~~~~~~~- 405 (419)
T 1jk0_A 327 EQRYFLDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSDYQKAGVMSKS- 405 (419)
T ss_dssp HHHHHHTTSCGGGGTCCHHHHHHHHHHHHHHHHHTTTCCCSSCCCCCCGGGGC---------------------------
T ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCChHHHHHhccccccccCcCCccccccccccccc-
Confidence 9999999999999999999999999999999999999999999999999999988888899999999999999877554
Q ss_pred CCCcccccccCCCC
Q 018964 335 NGEKNFVFKLDEDF 348 (348)
Q Consensus 335 ~~~~~~~~~~~~df 348 (348)
+...|..|+||+||
T Consensus 406 ~~~~~~~~~~~~~f 419 (419)
T 1jk0_A 406 TKQEAGAFTFNEDF 419 (419)
T ss_dssp --------------
T ss_pred CCCCCCccccCCCC
Confidence 11126789999998
No 5
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=100.00 E-value=1.7e-79 Score=576.69 Aligned_cols=283 Identities=66% Similarity=1.149 Sum_probs=275.8
Q ss_pred ccCccccccCCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 018964 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLA 102 (348)
Q Consensus 23 ~~~e~il~~~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~ 102 (348)
+++||||.+|+.|++++|++|||+|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|++++.
T Consensus 3 ~~~e~~l~~~~~r~~~~pikY~~~~~~ykk~~~~fW~peEI~ls~D~~dw~~L~~~Er~~~~~~l~~~~~~D~iv~~~l~ 82 (286)
T 3olj_A 3 VEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLV 82 (286)
T ss_dssp STTCTTTSCCTTTTCCCSCCCHHHHHHHHHHHHTCCCGGGSCCTTSHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCccccCCCCCeeeeCCCchHHHHHHHHHHHcCCChHHcChhhhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcC-chHHHHHHH
Q 018964 103 ARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLV 181 (348)
Q Consensus 103 ~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~-~~~~~~~lv 181 (348)
+.+++.++.||+++|+++|+++|+||+++||+|+++++.||++++++|+++.++|++++|++|+.+++.+ +.+++++++
T Consensus 83 ~~~~~~v~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~~~~f~~~~~~p~l~~K~~~~~~~~~~~~~~~~~~lv 162 (286)
T 3olj_A 83 ERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVV 162 (286)
T ss_dssp HTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHTHHHHCGGGHHHHHHHHHHHHCSSSCHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCChhHHHHHHH
Confidence 8999999999999999999999999999999999999989999999999999999999999999999965 456899999
Q ss_pred HHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 018964 182 GFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCE 261 (348)
Q Consensus 182 ~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~~~~ 261 (348)
+++++||++|||||+++++|+++|+|||++++|++|+|||++|+.|++.+++.+++++++++|++++++||++|++|+.+
T Consensus 163 a~~~lEgi~f~~~F~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~~~~~l~~~l~~~~~~~~v~~~~~eave~E~~~~~~ 242 (286)
T 3olj_A 163 AFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTE 242 (286)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcchh
Q 018964 262 ALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWM 305 (348)
Q Consensus 262 ~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~~nP~~w~ 305 (348)
+++++++|||.+.+++||+|+||+||.+||++|+|+++||+|||
T Consensus 243 ~l~~~~~Gl~~~~~~~yi~y~An~~L~~lG~~~~f~~~nP~~~m 286 (286)
T 3olj_A 243 ALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFM 286 (286)
T ss_dssp TSCGGGGTCCHHHHHHHHHHHHHHHHHHHTCCCSSCCCCCCTTC
T ss_pred HcCCCcCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999997
No 6
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=100.00 E-value=7.9e-79 Score=586.96 Aligned_cols=306 Identities=29% Similarity=0.549 Sum_probs=267.6
Q ss_pred cccCcccccc-CCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHh--cCCHHHHHHHHHHHHHHHHHHHHHH
Q 018964 22 QEDQEPILME-QNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWE--RLLDSEKHFISHVLAFFAASDGIVL 98 (348)
Q Consensus 22 ~~~~e~il~~-~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~--~L~~~er~~~~~~la~l~~~d~~v~ 98 (348)
..++++||+| +++|++++|++|||+|++|+++.++||+|+|||+++|+.||+ +||+.||++++++|++|+++|++|+
T Consensus 14 ~~~~~~i~~~~~~~~~~~~p~ky~~~~~ly~~~~~~fW~peEIdls~D~~dw~~~~Lt~~Er~~~~~~l~~~~~~D~iv~ 93 (346)
T 1syy_A 14 NLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAESLVG 93 (346)
T ss_dssp CGGGCCSSSCCSSCTTCCCSCCCHHHHHHHHHHHHTCCCGGGSCCHHHHHHHHSSCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCcCCCCCCcceecCCccHHHHHHHHHHHHcCCcHhhcchhhhHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567999999 778999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcC------
Q 018964 99 ENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS------ 172 (348)
Q Consensus 99 ~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~------ 172 (348)
+++++.+++.++.||+++|+++|+++|+||+++||+|+++++.+++ ++|+++.++|+|++|++|+.+++++
T Consensus 94 ~~~~~~l~~~v~~~E~~~~l~~q~~~EaiHs~sYs~il~tl~~~~~---e~f~~~~~~p~l~~k~~~i~~~y~~~~~~~~ 170 (346)
T 1syy_A 94 NNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEK---EIFNAYNERAAIKAKDDFQMEITGKVLDPNF 170 (346)
T ss_dssp HHHHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHH---HHTTHHHHCHHHHHHHHHHHHTTSGGGSTTC
T ss_pred HhHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHhhCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999899999999999999999999999999999999999987775 5899999999999999999999863
Q ss_pred -------chHHHHHHHHH-HHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh----
Q 018964 173 -------SDSFAERLVGF-ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH---- 240 (348)
Q Consensus 173 -------~~~~~~~lv~~-~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~---- 240 (348)
+.+++++++++ +++||++|||||+++++|+++|+|||++++|++|+|||++|+.|++.+++.++.+.|
T Consensus 171 ~~~~~~~~~~~~~~lva~~~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~e~p~~~~ 250 (346)
T 1syy_A 171 RTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWT 250 (346)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCC
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChhhh
Confidence 35789999999 599999999999999999999999999999999999999999999999998886543
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcchh-hhcccccCCCc
Q 018964 241 ---WQKVHHMVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWM-EFISLQGKANF 316 (348)
Q Consensus 241 ---~~~i~~l~~eav~~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~~nP~~w~-~~~~~~~~~nF 316 (348)
.++|++++.+||++|++|+.++++.+++|||.+++++||+|+||+||++||++|+|++.||+||| +..+..+++||
T Consensus 251 ~e~~~~v~~l~~eav~~E~~~~~~~l~~~~~Gln~~~~~~yi~y~an~rL~~lG~~~~y~~~np~pw~~~~~~~~~~~nF 330 (346)
T 1syy_A 251 PELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKEKNF 330 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSCBTTBCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCSCTTC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCchHHHHHhCcCCCCCC
Confidence 57899999999999999999999889999999999999999999999999999999999999999 55566677899
Q ss_pred cccccccccccccc
Q 018964 317 FERRVGDYQKASVM 330 (348)
Q Consensus 317 FE~~~t~Y~~~~~~ 330 (348)
||+++++|+||+++
T Consensus 331 Fe~~~~~Y~~~~~~ 344 (346)
T 1syy_A 331 FETRVIEYQHAASL 344 (346)
T ss_dssp --------------
T ss_pred CcCCCccccccccC
Confidence 99999999999865
No 7
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=100.00 E-value=1.1e-78 Score=579.62 Aligned_cols=300 Identities=26% Similarity=0.408 Sum_probs=251.4
Q ss_pred cccCccccccCCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhH
Q 018964 22 QEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENL 101 (348)
Q Consensus 22 ~~~~e~il~~~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l 101 (348)
...-+|+|++|+.|++ +|++||++|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|++++
T Consensus 12 ~~~~~~~~~~~~~r~~-~p~~yp~~~~lykk~~~~fW~peEI~ls~D~~dw~~Lt~~Er~~~~~vl~~~~~~D~iv~~nl 90 (324)
T 4a58_A 12 STSLYKKAGSAMSKLL-YVRDHEGFACLTVETHRNRWFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNI 90 (324)
T ss_dssp -------------CCS-CCCCCHHHHHHHHHHHHHCCCGGGCCCHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHhccCHHhhc-CCccCHHHHHHHHHHHHcCCChHhcCHhhhHHHHHhCCHHHHHHHHHHHHHHHHhHHHHHhhH
Confidence 3446899999999997 899999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHH
Q 018964 102 AARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI-KDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180 (348)
Q Consensus 102 ~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~-~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~l 180 (348)
. .+++.++.||+++|+++|+++|+||+++||+|+++++ .||+++.++|+++.++|++++|++|+.+++++..++++++
T Consensus 91 ~-~l~~~i~~pE~~~~l~~q~~~E~iHs~sYs~il~tl~~~d~~e~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~l 169 (324)
T 4a58_A 91 D-ELVTSFESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMTDEALQAKISWLRDKVAAAVTLPEKI 169 (324)
T ss_dssp H-HHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHTCGGGHHHHHCCCCCHHHCSSHHHHH
T ss_pred H-HHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCchhHHHHH
Confidence 6 6999999999999999999999999999999999997 4788999999999999999999999999998777899999
Q ss_pred HHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHH
Q 018964 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK---RLHWQKVHHMVHEAVEIETQ 257 (348)
Q Consensus 181 v~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~---e~~~~~i~~l~~eav~~E~~ 257 (348)
++++++||++|||||+++++|+++|+|||++++|++|+|||++|+.|++.+++.+.. ++..++|++++++||++|++
T Consensus 170 va~~~lEgi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~p~~~~v~~i~~eave~E~~ 249 (324)
T 4a58_A 170 LVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMTAKADRPRATWIQELFRTAVEVETA 249 (324)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998874 56789999999999999999
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCC----CCcchhhhcccccCCCcccccccccccc
Q 018964 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVE----NPFDWMEFISLQGKANFFERRVGDYQKA 327 (348)
Q Consensus 258 ~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~~----nP~~w~~~~~~~~~~nFFE~~~t~Y~~~ 327 (348)
|++++++ ++.|||.+.+++||+|+||+||.+||++|+|++. ||+||+. ..+++||||+|+++|+|+
T Consensus 250 ~~~~~~~-~~~~ln~~~~~~Yi~y~An~~L~~LG~~~~y~~~~p~~np~~~~~---~~~~~nFFe~r~~~Y~k~ 319 (324)
T 4a58_A 250 FIEARGE-GVTLVDVRAIKQFLEATADRILGDIGQAPLYGTPPPKDCPLTYMT---SIKQTNFFEQESSDYTML 319 (324)
T ss_dssp HHHHHST-TCTTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCC------------------------------
T ss_pred HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCcchhhc---cCccCCCCCCchhhccch
Confidence 9999997 6789999999999999999999999999999764 6788886 357999999999999976
No 8
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=1.1e-77 Score=579.30 Aligned_cols=306 Identities=22% Similarity=0.377 Sum_probs=267.3
Q ss_pred cCccccccCCCc-eeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 018964 24 DQEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLA 102 (348)
Q Consensus 24 ~~e~il~~~~~~-~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~ 102 (348)
.+++||+||+.+ .+++|++|||+|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|++++
T Consensus 18 ~~~~i~~~~~~~~~n~~~~~y~~~~~ly~~~~~~fW~peEIdls~D~~dw~~Lt~~Er~~~~~~l~~~~~~D~~v~~~l- 96 (346)
T 2rcc_A 18 ASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFLDSVQTDYS- 96 (346)
T ss_dssp SCSCSBSCCCCSCCCTTSCSBTTHHHHHHHHHHTCCCGGGSCCHHHHHHGGGSCHHHHHHHHHHHHHHHHTTTTCCCHH-
T ss_pred ccCCCcCCCCCcccccCCCCCHHHHHHHHHHHHcCCChhhcchhhhHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhH-
Confidence 689999999986 469999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhc------CchHH
Q 018964 103 ARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIH------SSDSF 176 (348)
Q Consensus 103 ~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~------~~~~~ 176 (348)
+.+++.++.||+++|+++|+++|+||+++||+|++++ .+|++++++|+++.++|+|++|++|+.++++ ++.++
T Consensus 97 ~~l~~~~~~~e~~~~~~~q~~~E~iHs~sYs~il~tl-~~~~e~~~~f~~~~~~p~l~~k~~~i~~~~~~~~~~~~~~~~ 175 (346)
T 2rcc_A 97 MRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSL-VPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTF 175 (346)
T ss_dssp HHHHTTBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCHHHH
T ss_pred HHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhhHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcCCChHHH
Confidence 8899999999999999999999999999999999999 5888999999999999999999999999885 24579
Q ss_pred HHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh-------HHHHHHHHH
Q 018964 177 AERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH-------WQKVHHMVH 249 (348)
Q Consensus 177 ~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~-------~~~i~~l~~ 249 (348)
++++++++++|||+|||||+++++|+++|+|||++++|++|+|||++|+.|++.+++.++.+.+ .+.|++++.
T Consensus 176 ~~~lva~~~lEgi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~e~~~~~~~e~~~~v~~l~~ 255 (346)
T 2rcc_A 176 LESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLM 255 (346)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCChhccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999887543 368999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCCcchhhhcc-c-ccCCCcccccccccc
Q 018964 250 EAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKY--NVENPFDWMEFIS-L-QGKANFFERRVGDYQ 325 (348)
Q Consensus 250 eav~~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y--~~~nP~~w~~~~~-~-~~~~nFFE~~~t~Y~ 325 (348)
+||++|++|+.+++|.+++||+.+++++||+|+||+||.+||++|+| ++.||+|||+.+. . .+++||||+++++|+
T Consensus 256 eav~~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~f~~~~~nP~~w~~~~~~~~~~~~nFFe~~~~~Y~ 335 (346)
T 2rcc_A 256 KAADLEKDWFRYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYA 335 (346)
T ss_dssp HHHHHHHHHHHHHTTTCSTTCCHHHHHHHHHHHHHHHHHHTTCCCSCTTCCSCSCTTC----------------------
T ss_pred HHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHhccCccccCCCcCCccccc
Confidence 99999999999999888999999999999999999999999999999 5799999997654 4 568999999999999
Q ss_pred cccccc
Q 018964 326 KASVMS 331 (348)
Q Consensus 326 ~~~~~~ 331 (348)
+++++.
T Consensus 336 ~~~~~~ 341 (346)
T 2rcc_A 336 KVSADN 341 (346)
T ss_dssp ------
T ss_pred cccCcc
Confidence 987654
No 9
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=100.00 E-value=4.1e-77 Score=580.47 Aligned_cols=309 Identities=23% Similarity=0.338 Sum_probs=265.1
Q ss_pred cccCccccccCCCc-eeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhh
Q 018964 22 QEDQEPILMEQNQR-FCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLEN 100 (348)
Q Consensus 22 ~~~~e~il~~~~~~-~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~ 100 (348)
+..++|||+||+.+ ..+.|++|||+|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|+++
T Consensus 11 ~~~~~~~~~g~~~n~~r~~~~~y~~~~~lykk~~~~fW~peEIdls~D~~dw~~Lt~~Er~~~~~~l~~~~~~Dsiv~~~ 90 (375)
T 1mxr_A 11 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRS 90 (375)
T ss_dssp CTTSSCSBSSSCCCSCCCSCCSCHHHHHHHHHHHHTCCCGGGSCCTTHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCcCCCCCChhhcCCcccHHHHHHHHHHHhcCCCchhcchhhhHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44679999999854 34559999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcC--------
Q 018964 101 LAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-------- 172 (348)
Q Consensus 101 l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~-------- 172 (348)
+.+.+++.++.||+++|++.|+++|+||+++||+|+++++.||+ ++|+++.++|+|++|++|+.++|++
T Consensus 91 ~~~~~~~~v~~pE~~~~l~~~~~~E~iHs~sYs~il~tl~~~~~---e~f~~i~~~p~i~~Ka~~i~~~y~~~~~~~~~~ 167 (375)
T 1mxr_A 91 PNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS---VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYW 167 (375)
T ss_dssp HHHHTGGGBCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHH---HHHHHHHHCHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99889999999999999999999999999999999999988876 5999999999999999999998853
Q ss_pred ----------------------chHHHHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHH
Q 018964 173 ----------------------SDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL 230 (348)
Q Consensus 173 ----------------------~~~~~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~ 230 (348)
++++++++++++++|||+|||||+++++|+++|+|||++++|++|+|||++|+.|++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lva~~~lEgi~FysgF~~~~~l~~~g~m~G~~~~i~lI~RDE~lH~~~~~~ 247 (375)
T 1mxr_A 168 HLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQH 247 (375)
T ss_dssp HHHCSEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccchhhcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 2368899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh--hh---------hHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCC-
Q 018964 231 LYSLLRK--RL---------HWQKVHHMVHEAVEIETQFVCEALP-CALIGMNSSLMSQYIKFVADRLLVALGCQRKYN- 297 (348)
Q Consensus 231 l~~~l~~--e~---------~~~~i~~l~~eav~~E~~~~~~~~~-~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~- 297 (348)
+++.++. +. ..++|++|+++||++|++|+.++++ ++++||+.+.+++||+|+||+||.+||++|+|+
T Consensus 248 l~~~l~~~~e~p~~~~~~~~~~~~i~~l~~eave~E~~~~~~~~~~~~~~Gl~~~~~~~Yi~y~an~rL~~LG~~~~y~~ 327 (375)
T 1mxr_A 248 MLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQT 327 (375)
T ss_dssp HHHHHHHTSSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTTCCBTTBSHHHHHHHHHHHHHHHHHHTTCCCCSCC
T ss_pred HHHHHhcccCChhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9999887 22 2478999999999999999999995 588999999999999999999999999999997
Q ss_pred CCCCcchhhhccc--ccCCCcccccccccccccccccc
Q 018964 298 VENPFDWMEFISL--QGKANFFERRVGDYQKASVMSSL 333 (348)
Q Consensus 298 ~~nP~~w~~~~~~--~~~~nFFE~~~t~Y~~~~~~~~~ 333 (348)
+.||+|||+.+.. ..++||||+++++|++|++..+.
T Consensus 328 ~~nP~~w~~~~~~~~~~~~nFFE~~~t~Y~~~~~~~~~ 365 (375)
T 1mxr_A 328 RSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEV 365 (375)
T ss_dssp CCCSCGGGGGTC--------------------------
T ss_pred CCCCHHHHHHHHhhcccccCCCccCcchhhhccccccC
Confidence 4899999977532 35689999999999999765343
No 10
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=100.00 E-value=1.1e-77 Score=570.07 Aligned_cols=286 Identities=64% Similarity=1.127 Sum_probs=271.4
Q ss_pred ccccCccccccCCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhh
Q 018964 21 EQEDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLEN 100 (348)
Q Consensus 21 ~~~~~e~il~~~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~ 100 (348)
+.+++||||+||+.|++++|++|||+|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|+++
T Consensus 25 ~~~~~e~ll~~n~~r~~~~p~ky~~~~~ly~k~~~~fW~peEIdls~D~~dw~~Lt~~Er~~~~~~l~~~~~~D~iv~~~ 104 (311)
T 2o1z_A 25 SKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDNEKHFIKHVLAFFAASDGIVLEN 104 (311)
T ss_dssp TTGGGCGGGSCCCSCCSSCSCSCHHHHHHHHHHHHTCCCGGGCCCHHHHHHHHHSCHHHHHHHHHHHHHHHHC-------
T ss_pred hhhhhCchhcCCCcccccCCCCcHHHHHHHHHHHHcCCcHhhcchhccHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHH
Q 018964 101 LAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180 (348)
Q Consensus 101 l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~l 180 (348)
+++.+++.++.||+++|+++|+++|+||+++||+|+++++.|+.+++++|+++.++|++++|++|+.++++++.++++++
T Consensus 105 l~~~l~~~v~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~l 184 (311)
T 2o1z_A 105 LASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNSFAERI 184 (311)
T ss_dssp CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHTTSHHHHHHHHHHHHHSSTTSCHHHHH
T ss_pred hHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCccHHHHHH
Confidence 98889999999999999999999999999999999999988999999999999999999999999999998777799999
Q ss_pred HHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 018964 181 VGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 181 v~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~~~ 260 (348)
++++++||++|||||+++++|+++|+|||++++|++|+|||++|+.|++.+++.+++++++++|++++++||++|++|+.
T Consensus 185 va~~~lEGi~fysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~~~~~~~i~~l~~eave~E~~~~~ 264 (311)
T 2o1z_A 185 VANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFIC 264 (311)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHHHTTBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred HhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCcchhh
Q 018964 261 EALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNVENPFDWME 306 (348)
Q Consensus 261 ~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~~nP~~w~~ 306 (348)
+++|.+++|++.+.+++||+|+||++|++||++|+|+++||+|||+
T Consensus 265 ~~~~~~~~Gl~~~~~~~yi~y~an~~L~~LG~~~~y~~~nP~~wm~ 310 (311)
T 2o1z_A 265 ESLPCDLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMD 310 (311)
T ss_dssp TTBCCTTTTCCHHHHHHHHHHHHHHHHHHTTCCCSSCCCCCCTTTT
T ss_pred HHccCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCcchhc
Confidence 9999999999999999999999999999999999999999999996
No 11
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=100.00 E-value=2.2e-74 Score=549.85 Aligned_cols=295 Identities=19% Similarity=0.260 Sum_probs=252.5
Q ss_pred CCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChH
Q 018964 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIP 112 (348)
Q Consensus 33 ~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~ 112 (348)
....+++|++||+.|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|++++.+.+++.++.|
T Consensus 6 ~~~inwn~i~y~~~~~~y~~~~~~fW~peEi~ls~D~~dw~~Lt~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~~~p 85 (319)
T 3n37_A 6 ISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTP 85 (319)
T ss_dssp CCCCCTTSCSCHHHHHHHHHHHHTCCCGGGSCGGGGHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGCSSH
T ss_pred cccccCCCcccHHHHHHHHHHHHcCCCHHhcChhhhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhHHHHH
Q 018964 113 EARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFS 192 (348)
Q Consensus 113 E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~~lEgi~f~ 192 (348)
|+++|+++|+++|+||+++||+|+++++.+ .++.++|+++.++|++++|++|+.++++++ ++++++|+++++||++||
T Consensus 86 e~~~~~~~q~~~E~iHs~sYs~il~tl~~~-~e~~~~f~~i~~~p~l~~K~~~i~~~~~~~-~~~~~~va~~~lEgi~Fy 163 (319)
T 3n37_A 86 HEEAVLSNISFMEAVHARSYSSIFSTLCQT-KDVDAAYAWSEENAPLQRKAQIIQQHYRGD-DPLKKKIASVFLESFLFY 163 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCH-HHHHHHHHHHHHCHHHHHHHHHHHHHHHSS-CHHHHHHHHHHHHHTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHhhCHHHHHHHHHHHHHHcCc-hHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999854 567889999999999999999999999876 467999999999999999
Q ss_pred hHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhH-------HHHHHHHHHHHHHHHHHHHHhcCC
Q 018964 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW-------QKVHHMVHEAVEIETQFVCEALPC 265 (348)
Q Consensus 193 s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~-------~~i~~l~~eav~~E~~~~~~~~~~ 265 (348)
|||+++++|+++|+|||++++|++|+|||++|+.|++.+++.+..++++ ++|++++++||++|++|+++++
T Consensus 164 s~F~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~~~~~~~~~~~~e~~~~i~~l~~eave~E~~~~~~~~-- 241 (319)
T 3n37_A 164 SGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELY-- 241 (319)
T ss_dssp HHHHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 9999999999999999999999999999999999999999999988654 3489999999999999999997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCC----CCCcchhhhccc--ccCCCcccccccccccccccccc
Q 018964 266 ALIGMNSSLMSQYIKFVADRLLVALGCQRKYNV----ENPFDWMEFISL--QGKANFFERRVGDYQKASVMSSL 333 (348)
Q Consensus 266 ~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~----~nP~~w~~~~~~--~~~~nFFE~~~t~Y~~~~~~~~~ 333 (348)
+++|++.+ +++||+|+||+||.+||++|+|++ +||++|+ ..+. .+++||||+|+++|++|++....
T Consensus 242 ~~iGl~~~-~~~yi~y~An~~L~~lG~~~~f~~~~~~~nP~~~~-~~~~~~~~~~nFFe~r~~~Y~~~~~~~~~ 313 (319)
T 3n37_A 242 AETPWADD-VKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILA-ALSPNADENHDFFSGSGSSYVMGKAVETE 313 (319)
T ss_dssp TTSSCHHH-HHHHHHHHHHHHHHHTTCCCCSCGGGCCCCHHHHH-HHCC-------------------------
T ss_pred hccCcHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCcccHH-hhccCccccCCCCCCChhhhhcCCCcccc
Confidence 67899765 999999999999999999999986 5666555 3333 37899999999999999765443
No 12
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-74 Score=556.11 Aligned_cols=304 Identities=19% Similarity=0.267 Sum_probs=255.4
Q ss_pred cCCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCC
Q 018964 31 EQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQ 110 (348)
Q Consensus 31 ~~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~ 110 (348)
+...+.+++|++|||.+++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|++++++.+++.++
T Consensus 24 ~~~~~inwn~i~y~~~~~~ykk~~~nfW~peEI~ls~D~~dw~~Lt~~Er~~~~~vl~f~~~~Dsiv~~~~~~~~~~~v~ 103 (350)
T 4dr0_A 24 KIYDAANWSKHEDDFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIVAEHVD 103 (350)
T ss_dssp CCCCCSCSSSCSSSSHHHHHHHHHHTCCCGGGSCCGGGHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHSC
T ss_pred ccccccCCCCcccHHHHHHHHHHHHcCCChhhcChhhhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCC
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCc-----hHHHHHHHHHH
Q 018964 111 IPEARAFYGFQIAMEN-IHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSS-----DSFAERLVGFA 184 (348)
Q Consensus 111 ~~E~~~~~~~q~~~E~-iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~-----~~~~~~lv~~~ 184 (348)
.||+++||++|+++|+ ||+++||+|+++++ +++++.++|+++.++|+|++|++|+.+++++. +++++++|+++
T Consensus 104 ~pE~~~~~~~q~~~E~aiHs~sYs~il~tl~-~~~e~~~~f~~~~~~p~l~~Ka~~i~~~y~~~~~~~~~~~~~~lva~~ 182 (350)
T 4dr0_A 104 GHQRKAVLNFMAMMENAVHAKSYSNIFMTLA-PTETINEVFEWVKQNKYLQKKAQMIVGLYKAIQKDDEISLFKAMVASV 182 (350)
T ss_dssp SHHHHHHHHHHHHHHHHTHHHHHHHHHHHHS-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchhHHHHHHHHhcCHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Confidence 9999999999999999 99999999999997 67788899999999999999999999999643 35899999999
Q ss_pred HhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhH-------HHHHHHHHHHHHHHHH
Q 018964 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW-------QKVHHMVHEAVEIETQ 257 (348)
Q Consensus 185 ~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~-------~~i~~l~~eav~~E~~ 257 (348)
++|||+|||||+++++|+++|+|||++++|++|+|||++|+.|++.+++.+..++++ +++++++++||++|++
T Consensus 183 ~lEGi~FysgF~~~~~l~~~g~m~G~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~e~~~e~~~~i~~l~~eave~E~~ 262 (350)
T 4dr0_A 183 YLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELE 262 (350)
T ss_dssp HHHHTTTHHHHHHHHHHHTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999887664 3478999999999999
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCC--CCCcchhhhcccccC-CCccccccccccccccccccc
Q 018964 258 FVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQRKYNV--ENPFDWMEFISLQGK-ANFFERRVGDYQKASVMSSLQ 334 (348)
Q Consensus 258 ~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~--~nP~~w~~~~~~~~~-~nFFE~~~t~Y~~~~~~~~~~ 334 (348)
|++++++ .+||+. ++++||+|+||+||.+||++|+|++ .||+ ||+..+..++ +||||+|+++|+||++....
T Consensus 263 ~~~~~~~--~iGl~~-~~~~Yi~y~An~~L~~LG~~~~y~~~~~nP~-~~~~~~~~~k~~nFFE~r~t~Y~k~~~~~~~- 337 (350)
T 4dr0_A 263 YTEDLYD--QVGLSH-DVKKFIRYNANKALMNLGFDPYFEEEDINPI-VLNGLNTKTKSHDFFSMKGNGYKKATVEPLK- 337 (350)
T ss_dssp HHHHHHG--GGTCHH-HHHHHHHHHHHHHHHHTTCCCCSCCCCCCHH-HHHTC---------------------------
T ss_pred HHHHHHh--cCCcHH-HHHHHHHHHHHHHHHHcCCCCCCCCCCCCch-HHHhcccccCcCCCCcCchhhhhhcccccCC-
Confidence 9999884 489985 5999999999999999999999986 5888 7776655444 69999999999999765333
Q ss_pred CCCccccccc
Q 018964 335 NGEKNFVFKL 344 (348)
Q Consensus 335 ~~~~~~~~~~ 344 (348)
|+.|.|
T Consensus 338 ----d~d~~f 343 (350)
T 4dr0_A 338 ----DDDFYF 343 (350)
T ss_dssp ----------
T ss_pred ----ccceec
Confidence 667777
No 13
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=100.00 E-value=6.7e-74 Score=548.33 Aligned_cols=294 Identities=19% Similarity=0.275 Sum_probs=251.1
Q ss_pred CceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHH
Q 018964 34 QRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPE 113 (348)
Q Consensus 34 ~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E 113 (348)
...+++|++||+.|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|++++.+.+++.++.||
T Consensus 17 ~~inwn~i~y~~~~~~y~~~~~~fW~peEI~ls~D~~dw~~Lt~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~~~pE 96 (329)
T 3dhz_A 17 KAINWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAETMH 96 (329)
T ss_dssp CCCCTTSCSSHHHHHHHHHHHHTCCCGGGSCGGGGHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHTGGGCSSHH
T ss_pred ccccCCCcccHHHHHHHHHHHHcCCCHhhcChhhhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCHH
Confidence 56799999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhHHHHHh
Q 018964 114 ARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSG 193 (348)
Q Consensus 114 ~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~~lEgi~f~s 193 (348)
+++|+++|+++|+||+++||+|+++++. +.++.++|+++.++|++++|++|+.++++++ ++++++|+++++|||+|||
T Consensus 97 ~~~~~~~q~~~E~iHs~sYs~il~tl~~-~~e~~~~f~~i~~~p~l~~K~~~i~~~~~~~-~~~~~~va~~~lEGi~Fys 174 (329)
T 3dhz_A 97 EEAVYTNIAFMESVHAKSYSNIFMTLAS-TPQINEAFRWSEENENLQRKAKIIMSYYNGD-DPLKKKVASTLLESFLFYS 174 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHTSS-CHHHHHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHhhCHHHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986 4567889999999999999999999999875 4679999999999999999
Q ss_pred HHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhH-------HHHHHHHHHHHHHHHHHHHHhcCCC
Q 018964 194 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW-------QKVHHMVHEAVEIETQFVCEALPCA 266 (348)
Q Consensus 194 ~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~-------~~i~~l~~eav~~E~~~~~~~~~~~ 266 (348)
||+++++|+++|+|||++++|++|+|||++|+.|++.+++.+..++++ +++++++++||++|++|+++++ +
T Consensus 175 gF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~~~~~~~~~e~~~~~~~l~~eave~E~~~~~~~~--~ 252 (329)
T 3dhz_A 175 GFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIY--D 252 (329)
T ss_dssp HHHHHHHHHTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--T
T ss_pred HHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--h
Confidence 999999999999999999999999999999999999999999988654 3488999999999999999987 5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCC----CCCcchhhhccc--ccCCCcccccccccccccccccc
Q 018964 267 LIGMNSSLMSQYIKFVADRLLVALGCQRKYNV----ENPFDWMEFISL--QGKANFFERRVGDYQKASVMSSL 333 (348)
Q Consensus 267 ~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~----~nP~~w~~~~~~--~~~~nFFE~~~t~Y~~~~~~~~~ 333 (348)
++||+.+ +++||+|+||+||.+||++|+|++ +||++|+ ..+. .+++||||+|+++|++|++....
T Consensus 253 ~iGl~~~-~~~yi~y~An~~L~~lG~~~~y~~~~~~~nP~~~~-~~~~~~~~~~nFFe~r~t~Y~~~~~~~~~ 323 (329)
T 3dhz_A 253 DLGWTED-VKRFLRYNANKALNNLGYEGLFPTDETKVSPAILS-SLSPNADENHDFFSGSGSSYVIGKAEDTT 323 (329)
T ss_dssp TTTCHHH-HHHHHHHHHHHHHHHTTCCCSSCGGGCCCCHHHHH-HHC--------------------------
T ss_pred ccCchHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCcccHH-HhccCccccCCCCCCChhhhhcCCccccc
Confidence 7899765 999999999999999999999986 5666555 3333 47899999999999999765443
No 14
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=100.00 E-value=5.8e-67 Score=493.54 Aligned_cols=261 Identities=20% Similarity=0.286 Sum_probs=246.5
Q ss_pred CCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChH
Q 018964 33 NQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIP 112 (348)
Q Consensus 33 ~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~ 112 (348)
..+.+++|++||+.|++|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|++++.+.+++.++.|
T Consensus 15 ~~~inwn~i~y~~~~~~y~k~~~~fW~peEI~ls~D~~dw~~Ls~~Er~~~~~~l~~~~~~D~iq~~~~~~~~~~~~~~p 94 (296)
T 3mjo_A 15 VKAINWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAETM 94 (296)
T ss_dssp CCCCCTTSCSCHHHHHHHHHHHHTCCCGGGSCGGGGHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGCSSH
T ss_pred cccccCCCCccHHHHHHHHHHHHcCCCHHHcChhccHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhHHHHH
Q 018964 113 EARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFS 192 (348)
Q Consensus 113 E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~~lEgi~f~ 192 (348)
|+++|+++|+++|+||+++||+|+++++.+ .++.++|+++.++|++++|++|+.++++++ ++++++++++++||++||
T Consensus 95 e~~~~~~~q~~~E~iHs~sYs~il~tl~~~-~e~~~~f~~i~~~p~l~~K~~~i~~~~~~~-~~~~~~va~~~lEGi~Fy 172 (296)
T 3mjo_A 95 HEEAVYTNIAFMESVHAKSYSNIFMTLAST-PQINEAFRWSEENENLQRKAKIIMSYYNGD-DPLKKKVASTLLESFLFY 172 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCH-HHHHHHHHHHHHCHHHHHHHHHHHHHHTSS-CHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHhcCHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999864 467889999999999999999999999875 467999999999999999
Q ss_pred hHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhH-------HHHHHHHHHHHHHHHHHHHHhcCC
Q 018964 193 GSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW-------QKVHHMVHEAVEIETQFVCEALPC 265 (348)
Q Consensus 193 s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~-------~~i~~l~~eav~~E~~~~~~~~~~ 265 (348)
|||+++++|+++|+|||++++|++|+|||++|+.|++.+++.+..++++ +++++++++||++|++|+++++
T Consensus 173 sgF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~~~~~e~~~~v~~l~~eave~E~~~~~~~~-- 250 (296)
T 3mjo_A 173 SGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIY-- 250 (296)
T ss_dssp HHTHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 9999999999999999999999999999999999999999999988664 3488999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 018964 266 ALIGMNSSLMSQYIKFVADRLLVALGCQRKYNV 298 (348)
Q Consensus 266 ~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~ 298 (348)
+++|++.+ +++||+|+||+||.+||++|+|++
T Consensus 251 ~~iGl~~~-~~~yi~y~An~~L~~LG~~~~y~~ 282 (296)
T 3mjo_A 251 DDLGWTED-VKRFLRYNANKALNNLGYEGLFPT 282 (296)
T ss_dssp TTTTCHHH-HHHHHHHHHHHHHHHTTCCCSSCG
T ss_pred hccCcHHH-HHHHHHHHHHHHHHHCCCCCCCCC
Confidence 67899765 999999999999999999999974
No 15
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=100.00 E-value=1.8e-60 Score=453.88 Aligned_cols=264 Identities=16% Similarity=0.263 Sum_probs=238.9
Q ss_pred ccCccccccCCCceeeccCCchHHHHHHHHHhcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 018964 23 EDQEPILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLA 102 (348)
Q Consensus 23 ~~~e~il~~~~~~~~~~pikY~~~~~lykk~~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~ 102 (348)
+..+++|.+|+.||+++|++ +|+++.++||+|+|||+++|+.||++||+.||++++++|++|+++|++|++++.
T Consensus 12 ~~~~~~l~~~~~~~~~~p~~------ly~k~~~~fW~peEIdls~D~~dw~~Lt~~Er~~~~~vL~~ft~~D~iv~~nl~ 85 (323)
T 3ee4_A 12 RTRSGSLAAGGLNWASLPLK------LFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQ 85 (323)
T ss_dssp CCCCGGGSTTCCCTTSHHHH------HHHHHHHTCCCGGGSCCTTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred cccchhccCCCCCcccchHH------HHHHHHHcCCChHhcChhhhHHHHHHCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 45789999999999999995 999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhcCCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHH-HHHh----c--C
Q 018964 103 ARFLNDIQI---PEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWA-LDWI----H--S 172 (348)
Q Consensus 103 ~~~~~~~~~---~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i-~~~~----~--~ 172 (348)
.++..++. ||+++|+++|+++|+||+++||+|+++++.+++ +|+++.++|.+++|..+. ...+ + +
T Consensus 86 -~~~~~v~~e~~pE~~~~l~~q~~~EaiHs~sYs~il~tl~~~~~----~f~~~~~~p~lr~k~~~~l~~~~~~~~~~~~ 160 (323)
T 3ee4_A 86 -PFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED----LHRYLDDLPAYRQIFYAELPECLNALSADPS 160 (323)
T ss_dssp -HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSC----CGGGGTTCHHHHHHHHTHHHHHHHHHHHCCC
T ss_pred -HHHHHhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH----HHHHHHcCHHHHHHHHHHHHHHHHhhccCCC
Confidence 57777664 999999999999999999999999999987763 899999999999886422 1222 1 3
Q ss_pred chHHHHHHHHHH-HhhHHHHHhHHHHHH-HHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh------HHHH
Q 018964 173 SDSFAERLVGFA-CVEGIFFSGSFCAIF-WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH------WQKV 244 (348)
Q Consensus 173 ~~~~~~~lv~~~-~lEgi~f~s~F~~~~-~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~------~~~i 244 (348)
+.++++++++|+ ++|||+|||||++++ +|+++|+|||++++|++|+|||++|+.|++.+++.++.+.| .++|
T Consensus 161 ~~~~~~~lvaf~~~lEGi~FysgF~~~~~~l~~rg~m~G~~~~i~lI~RDE~~H~~f~~~l~~~l~~e~p~~~~~~~~~v 240 (323)
T 3ee4_A 161 PAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTVFETRM 240 (323)
T ss_dssp HHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhhHHHHHHH
Confidence 356899999995 899999999997555 89999999999999999999999999999999999988765 4789
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCC-CCCHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 018964 245 HHMVHEAVEIETQFVCEALPCALI-GMNSSLMSQYIKFVADRLLVALGCQRKYNV 298 (348)
Q Consensus 245 ~~l~~eav~~E~~~~~~~~~~~~~-Gl~~~~~~~yi~y~an~~L~~lG~~~~y~~ 298 (348)
++++.+||++ ++|+.++++.+++ |||.+++++||+|+||+||.+||+++.|++
T Consensus 241 ~el~~eave~-~e~~~~~~~~~~~lGl~~~~~~~Yi~y~AnrrL~~LG~~~~f~~ 294 (323)
T 3ee4_A 241 NELIPLALRL-IEEGFALYGDQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPV 294 (323)
T ss_dssp HHHHHHHHHH-HHHHHHTTTTCCSTTCCHHHHHHHHHHHHHHHHHHHHTTTTCCG
T ss_pred HHHHHHHHHH-HHHHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCH
Confidence 9999999999 9999988877774 999999999999999999999999999974
No 16
>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 3n1z_A* 3rnf_A* 3n20_A* 3rnc_A 3rn9_A* 3n1x_A 3rne_A 2rdb_A* 3n1y_A* 3rnb_A 3rng_A 3rna_A
Probab=98.24 E-value=0.0001 Score=73.20 Aligned_cols=222 Identities=14% Similarity=0.047 Sum_probs=135.5
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 018964 71 HWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF 150 (348)
Q Consensus 71 d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~ 150 (348)
.+..+++.-+.+++..++.+..++-...... ..+....+.+.++.+.++|+.+|.+|+..-.++...+......-.. |
T Consensus 80 ~~~~~dprw~~~lk~~~~~~~~~Ey~a~~~~-a~~~r~ap~~~~rnaaa~q~lDElRHaQ~~~~~~~el~~~~~~~~~-f 157 (491)
T 2inc_A 80 FVDRADPGWVSTMQLHFGAIALEEYAASTAE-ARMARFAKAPGNRNMATFGMMDENRHGQIQLYFPYANVKRSRKWDW-A 157 (491)
T ss_dssp GGGTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGCGGGGH-H
T ss_pred CcccCCHHHHHHHHHHHhhhhHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhccc-c
Confidence 3456888888888888888877775554444 3567889999999999999999999999988777765432211001 2
Q ss_pred H--HHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHH-HhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHH
Q 018964 151 N--AIENIPCVAQKAKWALDWIHSSDSFAERLVGFA-CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227 (348)
Q Consensus 151 ~--~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~-~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f 227 (348)
+ ...++|..+.--..+.+..-+ ...++.+++.. +.|+++.--.|..+...+..+-=+.+..++..|+.||++|..+
T Consensus 158 ~~~~~~~~p~~~~~R~~~ed~~~t-~D~~E~~ialnlv~E~~~tnll~~~f~~~Aa~nGD~lt~~v~~siq~DEaRH~~~ 236 (491)
T 2inc_A 158 HKAIHTNEWAAIAARSFFDDMMMT-RDSVAVSIMLTFAFETGFTNMQFLGLAADAAEAGDHTFASLISSIQTDESRHAQQ 236 (491)
T ss_dssp HHGGGSCCHHHHHHHHHHHHHTTS-SCHHHHHHHCCCCCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHhhcCcccHHHHHHHHHhhcc-ccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHH
Confidence 2 234466554433344343222 23567777775 4698644434433333443332345999999999999999999
Q ss_pred HHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHH----HHHhcCCCCCCCC-HHHHHHHHHHHHHHHHHHcCCCCC
Q 018964 228 ACLLYSLLRKR----LHWQKVHHMVHEAVEIETQF----VCEALPCALIGMN-SSLMSQYIKFVADRLLVALGCQRK 295 (348)
Q Consensus 228 ~~~l~~~l~~e----~~~~~i~~l~~eav~~E~~~----~~~~~~~~~~Gl~-~~~~~~yi~y~an~~L~~lG~~~~ 295 (348)
|..+++.+... ..+..|..-+-.+.+.=..+ .++..+...---+ ++.+.+||.-..-++|..+|++.+
T Consensus 237 g~~ll~~ll~d~~~~~~Q~wld~w~wra~~a~~~l~g~~~dy~~p~~~r~~s~~e~~~~Wv~~~~~~~L~~lGL~~P 313 (491)
T 2inc_A 237 GGPSLKILVENGKKDEAQQMVDVAIWRSWKLFSVLTGPIMDYYTPLESRNQSFKEFMLEWIVAQFERQLLDLGLDKP 313 (491)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTSCGGGCCSCHHHHHHHHTHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHhCcCchHHHHHHHHHHHHHHHHHHhhhhHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999987754 22233333333333322222 1222221101111 455566655545667999999865
No 17
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=97.92 E-value=0.0011 Score=66.11 Aligned_cols=165 Identities=13% Similarity=-0.010 Sum_probs=109.2
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CChHHHH
Q 018964 71 HWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI---KDSKEKH 147 (348)
Q Consensus 71 d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~---~d~~e~~ 147 (348)
.+..+++.-+.+++..++.++.++-...... ..+....+.+.++.++.+|+.+|..|+..-.++...+. .||.--.
T Consensus 77 ~~~~~dprW~~~Lk~~l~av~~~EY~a~~~~-a~~~r~ap~~~~rnaaa~qalDElRHaQ~~~~l~k~~~~~~~dp~Gfd 155 (512)
T 1mty_D 77 AGVRVHPKWNETMKVVSNFLEVGEYNAIAAT-GMLWDSAQAAEQKNGYLAQVLDEIRHTHQCAYVNYYFAKNGQDPAGHN 155 (512)
T ss_dssp TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTTT
T ss_pred CcccCCHHHHHHHHHHHcccCHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccCCC
Confidence 3557999999999999999888885554444 45678899999999999999999999998554433332 2221000
Q ss_pred HHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHH-HhhHHHHHhHHHHHHHHH-hcCCCCchHHHHHHHHhhhhhhH
Q 018964 148 RLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFA-CVEGIFFSGSFCAIFWLK-KRGLMPGLTFSNELISRDEGLHC 225 (348)
Q Consensus 148 ~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~-~lEgi~f~s~F~~~~~l~-~~g~l~g~~~~i~~I~rDE~~H~ 225 (348)
..-.+..++|..+---+.+.+...+ ....+.+++.. +.|.++.---|..+...+ ..|= ..+..++.-|+.||++|.
T Consensus 156 ~~r~~~~~~p~~q~~R~~fe~~~~t-~D~~E~~valn~v~E~~~tnll~~~~~~~Aa~nGD-~~tptv~~siqsDEaRH~ 233 (512)
T 1mty_D 156 DARRTRTIGPLWKGMKRVFSDGFIS-GDAVECSLNLQLVGEACFTNPLIVAVTEWAAANGD-EITPTVFLSIETDELRHM 233 (512)
T ss_dssp THHHHGGGSSHHHHHHHHHTHHHHS-SCHHHHHHHHTTTHHHHTHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCchhhhHHHHHHHhhc-CChHHHhhhhhhhHHHHhHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHH
Confidence 0112344566554433333222222 23567777775 468875444444444443 3343 348999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 018964 226 DFACLLYSLLRKR 238 (348)
Q Consensus 226 ~f~~~l~~~l~~e 238 (348)
..|..++..|.+.
T Consensus 234 ~~g~~ll~~Lled 246 (512)
T 1mty_D 234 ANGYQTVVSIAND 246 (512)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcC
Confidence 9999999988764
No 18
>3ge3_A Toluene-4-monooxygenase system protein A; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} SCOP: a.25.1.2 PDB: 3ge8_A 3dhi_A* 3dhh_A* 3dhg_A* 3i5j_A 3i63_A 3q14_A 3q2a_A* 3q3m_A* 3q3n_A* 3q3o_A* 3rmk_A* 3ri7_A
Probab=97.64 E-value=0.0013 Score=65.22 Aligned_cols=219 Identities=14% Similarity=0.045 Sum_probs=130.2
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 018964 71 HWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLF 150 (348)
Q Consensus 71 d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~ 150 (348)
-+.++++.-..+++..++.+..++-..... ...+...++.++++.++.+|+.+|.+|+..=.+....+..++.-=+.-.
T Consensus 81 ~~~~ldp~W~~~Lk~~~~av~~~Ey~a~~g-~A~~~R~aps~~~rn~~~fQ~~DElRHaQ~q~y~~~~l~~~~~gFd~~~ 159 (500)
T 3ge3_A 81 IYENSDPGWISTLKSHYGAIAVGEYAAVTG-EGRMARFSKAPGNRNMATFGMMDELRHGQLQLFFPHEYCKKDRQFDWAW 159 (500)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGGHHH
T ss_pred CcccCCHHHHHHHHHHhcccchHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccChHH
Confidence 355788998889999999988888555433 3467788999999999999999999999987777776754332100011
Q ss_pred HHHhhcHHHH--HHHHHHHHHhcCchHHHHHHHHHH-HhhHH---HHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhh
Q 018964 151 NAIENIPCVA--QKAKWALDWIHSSDSFAERLVGFA-CVEGI---FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH 224 (348)
Q Consensus 151 ~~~~~~p~l~--~k~~~i~~~~~~~~~~~~~lv~~~-~lEgi---~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H 224 (348)
.++. +|.-+ .=-+++.+.+-+. ..++.+++.. +.|.+ +++++|. ..+..+==..+..++.-|+.||++|
T Consensus 160 r~~~-d~~W~~~~~R~~fE~~~~t~-Dw~E~~valnlvfEp~~tnll~v~l~---~~Aa~NGD~~tptl~~S~qsDe~Rh 234 (500)
T 3ge3_A 160 RAYH-SNEWAAIAAKHFFDDIITGR-DAISVAIMLTFSFETGFANMQFLGLA---ADAAEAGDYTFANLISSIQTDESRH 234 (500)
T ss_dssp HGGG-SCCHHHHHHHHHHHHHTTSS-CHHHHHHHTCCCCCCCCHHHHHTHHH---HHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHh-CchhhhhHHHHHHHHHHccC-CHHHHHHHHHhhHHHhhhHHHHHHHH---HHHHHcCChhhHHHHHHHHHhHHHH
Confidence 1222 22211 1111222233222 3567777764 45654 3334443 3333332356778889999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHH-------HHHHH-HHHhcCCCCCCCC-HHHHHHHHHHHHHHHHHHcCCCCC
Q 018964 225 CDFACLLYSLLRKRLHWQKVHHMVHEAVE-------IETQF-VCEALPCALIGMN-SSLMSQYIKFVADRLLVALGCQRK 295 (348)
Q Consensus 225 ~~f~~~l~~~l~~e~~~~~i~~l~~eav~-------~E~~~-~~~~~~~~~~Gl~-~~~~~~yi~y~an~~L~~lG~~~~ 295 (348)
...|..+++.+.+...++.+...++...- .=.+. .++..+.+.=-.+ ++-+.++|.---=++|..+|++++
T Consensus 235 ~~~g~alv~~lle~~~~~n~q~wld~wfwra~~a~~al~G~~~dY~~p~~~r~~S~~e~~~ewi~~~~~~~L~~~Gl~~P 314 (500)
T 3ge3_A 235 AQQGGPALQLLIENGKREEAQKKVDMAIWRAWRLFAVLTGPVMDYYTPLEDRSQSFKEFMYEWIIGQFERSLIDLGLDKP 314 (500)
T ss_dssp GGGHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCSSCHHHHHHHHTTTTHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 99999999988866334445554443322 22221 1222231111233 234444432223347999999886
No 19
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=97.55 E-value=0.014 Score=54.91 Aligned_cols=164 Identities=14% Similarity=-0.019 Sum_probs=101.9
Q ss_pred CCcCccc-cCccc------chHHH----hcCCHHHHHHHHHHHHHHHHHHHHHHhhHH---HHHHhcCC--------hHH
Q 018964 56 SFWTAEE-VDLSQ------DVQHW----ERLLDSEKHFISHVLAFFAASDGIVLENLA---ARFLNDIQ--------IPE 113 (348)
Q Consensus 56 ~fW~pee-id~s~------D~~d~----~~L~~~er~~~~~~la~l~~~d~~v~~~l~---~~~~~~~~--------~~E 113 (348)
..|.|++ ||.++ ++.+| ++||+.-.-++... .+..+++. ..+..... .+.
T Consensus 35 ~~Wqp~D~lPw~~~~~F~~~~~~~~~~~~~l~d~~~v~lv~~--------~iTEd~LPtY~~~L~~~fgvrd~~g~~~~~ 106 (338)
T 2uw1_A 35 KSWQPQDYLPDPVSDGFEEQVRELRERAKEIPDDYFVVLVGD--------MITEEALPTYMSMLNRCDGIKDETGAEPSA 106 (338)
T ss_dssp GCCCGGGGSCCTTSTTHHHHHHHHHHHHTTSCHHHHHHHHHH--------HHHHHTHHHHHHHHTTSTTTSCSSSSCCSH
T ss_pred hcCCchhcCCCccccchhhhcccccHhhccCCHHHHHHHHHH--------HHhhhcchHHHHHHHHHcCcccccCCCcch
Confidence 6899988 76555 56677 46887766554433 23333332 12223321 466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHhhcHHHHHHHHHHHHHhcC--chHHHHHHHHHHHhhHHH
Q 018964 114 ARAFYGFQIAMENIHSEMYSLLLETYI-KDSKEKHRLFNAIENIPCVAQKAKWALDWIHS--SDSFAERLVGFACVEGIF 190 (348)
Q Consensus 114 ~~~~~~~q~~~E~iH~esYs~il~~~~-~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~--~~~~~~~lv~~~~lEgi~ 190 (348)
...|.....++|+.|+.+-..++-.-+ -||....+ .+...+..-++- ..+-...++.-++-|..-
T Consensus 107 w~~w~~~WtaEEnrHg~aL~~YL~lsgrvDp~~lE~------------~~~~~i~~Gfd~~~~~~p~~~~vy~sfQE~AT 174 (338)
T 2uw1_A 107 WAMWTRAWTAEENRHGDLLNKYLYLSGRVDMRKIEK------------TIQYLIGSGMDIKSENSPYLGFIYTSFQERAT 174 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHH------------HHHHHHHHCCCCCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHhHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 788899999999999999999887543 26642111 011122222331 112345544445677754
Q ss_pred HHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh
Q 018964 191 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH 240 (348)
Q Consensus 191 f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~ 240 (348)
+ .++.-+--+++..-=|.++++...|++||.+|..|...++..+....+
T Consensus 175 ~-vsh~n~~r~A~~~gdPvLa~i~~~IA~DE~RH~~~Y~~~v~~~le~dp 223 (338)
T 2uw1_A 175 F-ISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDP 223 (338)
T ss_dssp H-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred H-HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 3 344445444443446889999999999999999999999987765544
No 20
>2inc_B Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 3n20_B* 1t0r_B 1t0s_B 1t0q_B* 3n1x_B 3n1y_B* 3n1z_B* 2rdb_B* 3rn9_B* 3rna_B 3rnb_B 3rnc_B 3rne_B 3rnf_B* 3rng_B 2ind_B*
Probab=97.52 E-value=0.022 Score=53.57 Aligned_cols=210 Identities=11% Similarity=-0.045 Sum_probs=129.5
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHH---HHHHHHHHhcCChHHHHH
Q 018964 72 WERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE---MYSLLLETYIKDSKEKHR 148 (348)
Q Consensus 72 ~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~e---sYs~il~~~~~d~~e~~~ 148 (348)
+..+++.-++.++..++-+-..+-...-+. ..+....+.+.++.++.+|++.|..|+. -|++-+....++...-..
T Consensus 103 ~~~ld~~w~~~l~~~l~p~~~~e~~~~~~~-a~~~r~~~~~~i~n~~~~qa~DelR~aQ~~~y~~~~L~~~~~~~g~~~~ 181 (322)
T 2inc_B 103 DQMLTREWVETLARFYTPARYLFHALQMGS-VYIHQIAPASTITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKR 181 (322)
T ss_dssp GGGSCHHHHHHHHHHTTTHHHHHHHHHHHH-HHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTS
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccchH
Confidence 446888888877777765555553322222 3467788899999999999999999999 777766555432210000
Q ss_pred HHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHH-HhhHHHHHhHHHHHHHHH-hcCCCCchHHHHHHHHhhhhhhHH
Q 018964 149 LFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFA-CVEGIFFSGSFCAIFWLK-KRGLMPGLTFSNELISRDEGLHCD 226 (348)
Q Consensus 149 ~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~-~lEgi~f~s~F~~~~~l~-~~g~l~g~~~~i~~I~rDE~~H~~ 226 (348)
-=..+.++|..+---.++.+.+-. ...++.+++.. ++|+++.---|..+-..+ .+| =..+..++..+..||++|..
T Consensus 182 ~k~~w~~~p~wq~~R~~~E~~~~~-~Dw~E~~va~nlv~e~l~~~l~~~~~~~~Aa~nG-D~~t~~l~~s~q~D~~Rh~~ 259 (322)
T 2inc_B 182 ERDVWENDPAWQGFRELIEKALIA-WDWGEAFTAINLVTKPAVEEALLQQLGSLAQSEG-DTLLGLLAQAQKRDAERHRR 259 (322)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHTTC-CSHHHHHHHHHTTHHHHHHHHHTHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCchhHHHHHHHHHhhcc-CCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHCC-ChhHHHHHHHHHHHHHHHHH
Confidence 112456788776655555554433 23678888886 469885444444433222 333 25678888999999999999
Q ss_pred HHHHHHHHHHhhhh-HHHHHHHHH----HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHcC
Q 018964 227 FACLLYSLLRKRLH-WQKVHHMVH----EAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALG 291 (348)
Q Consensus 227 f~~~l~~~l~~e~~-~~~i~~l~~----eav~~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG 291 (348)
.+..++..+.+++. ...+..-+. .+.+.=..++. ++.. .+ ...+-++-....++..+|
T Consensus 260 ~~~alvk~~~~~~~N~~~lq~wi~~w~~ra~~A~~~l~~-~~~~--~~----~~~~~~~~~~~~~~~~~g 322 (322)
T 2inc_B 260 WSSALVKMALEKEGNREVLQKWVAKWEPLADKAIEAYCS-ALPD--GE----NAIVEAKSASRYVRQMMG 322 (322)
T ss_dssp HHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH-HSTT--HH----HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHHHHHHHH-HhcC--CC----cHHHHHHHHHHHHHHhcc
Confidence 99999998876532 333333333 33333223321 2211 11 224667777777777776
No 21
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=97.44 E-value=0.032 Score=52.04 Aligned_cols=203 Identities=11% Similarity=0.007 Sum_probs=134.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018964 75 LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIE 154 (348)
Q Consensus 75 L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~ 154 (348)
+|+.-|..+.+.++.++-.+-+.+.-+. ......|..|.+..++..+..|.-|+..+..++..++.|+++ +.....
T Consensus 25 mP~~Yr~~L~~ll~~laD~ELi~~~rl~-ew~~~AP~Lee~iALa~ia~DE~GHa~~l~~~a~~lG~d~d~---l~~~~r 100 (311)
T 3pvt_A 25 MPDAYRKTLIRQIGQHAHSEIVGMLPEG-NWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCARED---IYQKML 100 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTHHHHH-TTGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHH---HHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhhHHHHHHHHH-HHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH---HHHHHh
Confidence 8899999999999888877655554443 356778899999999999999999999988888998766543 222121
Q ss_pred hcHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhhHHHHHhHHHHHHHHH-hcCCCCchHHHHHHHHhhhhhhHHHHHHHH
Q 018964 155 NIPCVAQKAKWALDWIH-SSDSFAERLVGFACVEGIFFSGSFCAIFWLK-KRGLMPGLTFSNELISRDEGLHCDFACLLY 232 (348)
Q Consensus 155 ~~p~l~~k~~~i~~~~~-~~~~~~~~lv~~~~lEgi~f~s~F~~~~~l~-~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~ 232 (348)
... .| ++ ...+ .+.+++..++--.+.. +++..++.. .+.-.+.++.+...|++.|+.|..++...+
T Consensus 101 ~~~---~~--~~-~lfe~P~~dWad~vvr~~l~D------~~a~~~~~~L~~ss~~plA~~a~ki~kEE~yH~~~g~~wv 168 (311)
T 3pvt_A 101 DGR---MK--YS-SIFNYPTLSWADIGVIGWLVD------GAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEAC 168 (311)
T ss_dssp TTS---SC--CC-GGGGSCCCSHHHHHHHHHHHH------HHHHHHHHTTTTCSBHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cch---hh--hh-hHHhCCCCCHHHHHHHHHHHH------HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 00 00 0112 2335666655433333 444443332 344578899999999999999999999988
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCC--------------CCCCCCHHHHHHHHHHHHHHHHHHcCCCCC
Q 018964 233 SLLRKRLHWQKVHHMVHEAVEIETQFVCEALPC--------------ALIGMNSSLMSQYIKFVADRLLVALGCQRK 295 (348)
Q Consensus 233 ~~l~~e~~~~~i~~l~~eav~~E~~~~~~~~~~--------------~~~Gl~~~~~~~yi~y~an~~L~~lG~~~~ 295 (348)
..|...- ++.++.+.+|++.=--++..+|+. .+-+.+.+++.+--.-.....|..+|+.-+
T Consensus 169 ~rL~~gt--~esr~r~Q~Al~~~wp~~~elFg~~~~~s~~~~~~~~~Gi~~~~n~eLR~~w~~~v~~~l~~~gL~~P 243 (311)
T 3pvt_A 169 MALAQGS--EAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMTVP 243 (311)
T ss_dssp HHHHTSC--HHHHHHHHHHHHHHHHHHHHTTCSCGGGCTTHHHHHHTTSCSSCHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHhCC--HHHHHHHHHHHHHHHHHHHHHcCCCccccchHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 8887432 345677777777544445445532 233356677766444467788999998764
No 22
>1mhy_B Methane monooxygenase hydroxylase; oxidoreductase, NADP, one-carbon metabolism; 2.00A {Methylosinus trichosporium} SCOP: a.25.1.2 PDB: 1mhz_B
Probab=97.08 E-value=0.082 Score=50.95 Aligned_cols=164 Identities=7% Similarity=-0.148 Sum_probs=108.9
Q ss_pred HHhcCCHHHH-HHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CChHH-
Q 018964 71 HWERLLDSEK-HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI---KDSKE- 145 (348)
Q Consensus 71 d~~~L~~~er-~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~---~d~~e- 145 (348)
.+..|++.-+ +.++..++.+..++-....+.. .+......+.++.++.+|++.|..|+..-+++...+. .++.+
T Consensus 135 ~~~~ld~~w~~~~l~~~l~p~r~~Eyga~~~~a-~~~r~~~~~~i~na~~fqa~DeLRhaQ~~~~~~~~l~~~~~g~~~~ 213 (395)
T 1mhy_B 135 SIRTIDPYWRDEILNKYFGALLYSEYGLFNAHS-SVGRDCLSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDAS 213 (395)
T ss_dssp GGGGSCHHHHHTTHHHHHHHHHHHHHHHHHHHH-HHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCC
T ss_pred ccccCCHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchh
Confidence 3457899999 8999999888888855544443 4678889999999999999999999999998866552 22210
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHH-hcCchHHHHHHHHHH-HhhHHHHHhHHHHH-HHHHhcCCCCchHHHHHHHHhhhh
Q 018964 146 KHRLFNAIENIPCVAQKAKWALDW-IHSSDSFAERLVGFA-CVEGIFFSGSFCAI-FWLKKRGLMPGLTFSNELISRDEG 222 (348)
Q Consensus 146 ~~~~~~~~~~~p~l~~k~~~i~~~-~~~~~~~~~~lv~~~-~lEgi~f~s~F~~~-~~l~~~g~l~g~~~~i~~I~rDE~ 222 (348)
.+.-=..+.++|.-+---.++.+. +.. ...++.+++.. ++|+++.---|..+ ..++..+==.-+..++.-+..||+
T Consensus 214 ~~~~k~~W~~dp~Wq~~R~~~E~~~l~~-~Dw~E~~vA~nlv~E~l~~~L~~~~~~~~~Aa~nGD~~tptl~~s~q~D~~ 292 (395)
T 1mhy_B 214 TDVPKKIWTTDPIYSGARATVQEIWQGV-QDWNEILWAGHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQ 292 (395)
T ss_dssp SHHHHHHHHHCGGGHHHHHHHHHHHHSC-CCHHHHHHHHHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhCcchHHHHHHHHhhhhhc-CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 001112344555443322233333 222 23678888886 46998655445444 344443323344555566999999
Q ss_pred hhHHHHHHHHHHHH
Q 018964 223 LHCDFACLLYSLLR 236 (348)
Q Consensus 223 ~H~~f~~~l~~~l~ 236 (348)
+|...+..++..+.
T Consensus 293 Rh~~~~~alvk~ll 306 (395)
T 1mhy_B 293 TTRGAIDDLFVYCL 306 (395)
T ss_dssp HHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998777
No 23
>3u52_C Phenol hydroxylase component PHL; 4-helix bundle, dioxygen, hydrocarbons, oxidore; HET: MPO EPE; 1.95A {Pseudomonas stutzeri} PDB: 2inn_C* 2inp_C
Probab=96.87 E-value=0.27 Score=46.24 Aligned_cols=210 Identities=10% Similarity=-0.043 Sum_probs=125.6
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH-HHHHH
Q 018964 72 WERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE-KHRLF 150 (348)
Q Consensus 72 ~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e-~~~~~ 150 (348)
+..+++.-++.++..++-+...+-...-+. ..+....+.+.++.+..+|++.|..|+..-+++.-.+..++.. ...--
T Consensus 108 ~~~ld~~w~~~l~~~~~plr~~E~ga~~~~-a~~~r~~~~~~i~na~~fqa~DelRhaQ~ls~~~l~l~~~~g~~~~~~k 186 (333)
T 3u52_C 108 LTRLSEETQKQLLRLLVPLRHVELGANMNN-AKIAGDATATTVSQMHIYTGMDRLGIGQYLSRIALMIDGSTGAALDESK 186 (333)
T ss_dssp TTTSCHHHHHHHHHHTTTHHHHHHHHHHHH-HHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSHHHHHHH
T ss_pred cccCCHHHHHHHHHHcchHhHHHHHHHHHH-HHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhHHH
Confidence 456888888888887777777664433333 3577888999999999999999999999777766555332211 11111
Q ss_pred HHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHH-HhhHHHHHhHHHHHHH-HHhcC-CCCchHHHHHHHHhh-hhhhHH
Q 018964 151 NAIENIPCVAQKAKWALDWIHSSDSFAERLVGFA-CVEGIFFSGSFCAIFW-LKKRG-LMPGLTFSNELISRD-EGLHCD 226 (348)
Q Consensus 151 ~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~-~lEgi~f~s~F~~~~~-l~~~g-~l~g~~~~i~~I~rD-E~~H~~ 226 (348)
..+.++|.-+---.++.+.+.. ...++.+++.. ++|+++.---|..+.. .+..| -+. + ++.-++.| |.+|..
T Consensus 187 ~~W~~dp~Wq~~R~~~Ed~~~~-~Dw~E~~vA~nlv~E~ll~~L~~~~~~~~aa~~gd~~~--~-~~~s~q~d~~~Rh~~ 262 (333)
T 3u52_C 187 AYWMDDEMWQPMRKLVEDTLVV-DDWFELTLVQNILIDGMMYPLVYDKMDQWFESQGAEDV--S-MLTEFMRDWYKESLR 262 (333)
T ss_dssp HHHHHCTTTHHHHHHHHHHTTC-CCHHHHHHHHHTHHHHHHHHHHHTHHHHHHHTTTCGGG--G-GTSHHHHHHHHHHHH
T ss_pred HHHHhCcchHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCCcee--h-hhHHHhhhHHHHHHH
Confidence 2345777555432333333322 23678888886 5898855444444432 23333 222 3 44445555 999999
Q ss_pred HHHHHHHHHHhhhh--HHHHHH----HHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCC
Q 018964 227 FACLLYSLLRKRLH--WQKVHH----MVHEAVEIETQFVCEALPCALIGMNSSLMSQYIKFVADRLLVALGCQR 294 (348)
Q Consensus 227 f~~~l~~~l~~e~~--~~~i~~----l~~eav~~E~~~~~~~~~~~~~Gl~~~~~~~yi~y~an~~L~~lG~~~ 294 (348)
.+..+++.+.++-+ ...+.. -+..+.+.=.-.+. .. +..+. .+-++-....++..+|+.+
T Consensus 263 ~~~alvk~ll~~~~~N~~~lq~Wi~~W~~ra~~al~pl~~-----~~--~~~~~-~~~~~~~~~~~~~~~gl~~ 328 (333)
T 3u52_C 263 WTNAMMKAVAGESETNRELLQKWIDHWEPQAYEALKPLAE-----AS--VGIDG-LNEARAELSARLKKFELQS 328 (333)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TT--TCHHH-HHHHHHHHHHHHGGGTCCC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hh--cCchH-HHHHHHHHHHHHHHCCCCc
Confidence 99999998876522 222332 23333331111111 11 22222 5557778888999999886
No 24
>3ge3_B Toluene-4-monooxygenase system protein E; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} PDB: 3ge8_B 3i5j_B 3i63_B 3dhi_B* 3dhh_B* 3dhg_B* 3q14_B 3q2a_B* 3q3m_B* 3q3n_B* 3q3o_B* 3rmk_B* 3ri7_B
Probab=96.80 E-value=0.086 Score=49.58 Aligned_cols=165 Identities=10% Similarity=-0.063 Sum_probs=106.3
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCChHHHHH
Q 018964 72 WERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEM---YSLLLETYIKDSKEKHR 148 (348)
Q Consensus 72 ~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~es---Ys~il~~~~~d~~e~~~ 148 (348)
+..+++.-+..++..++-+..++-...-+. ..+....+.+.++.+..+|+++|-.|+.. +++-+..-..+-+.-..
T Consensus 107 ~~~ld~~w~~~l~~~l~pl~~~e~~a~m~~-a~~~r~~~~~~i~na~~fqa~DelRhaQ~~q~~~~~l~~~~~~~~~~~~ 185 (327)
T 3ge3_B 107 DQMVREGWEHTMARCYSPLRYLFHCLQMSS-AYVQQMAPASTISNCCILQTADSLRWLTHTAYRTHELSLTYPDAGLGEH 185 (327)
T ss_dssp GGGSCTTHHHHHHHHTTTHHHHHHHHHHHH-HHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTS
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHH-HHHHHhcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCchhH
Confidence 446888888888877777766664333222 35777889999999999999999999555 76655443322110000
Q ss_pred HHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHH-HhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHH
Q 018964 149 LFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFA-CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 227 (348)
Q Consensus 149 ~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~-~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f 227 (348)
--..+.++|.-+---.++.+.+.. ...++.+++.. ++|+++.---|..+-..+..+==..+..++..+..||++|...
T Consensus 186 ~k~~W~~dp~Wq~~R~~~Ed~~~~-~Dw~E~~vA~nlv~E~l~~~L~~~~~~~~Aa~nGD~~t~~l~~s~qsD~~Rh~~~ 264 (327)
T 3ge3_B 186 ERELWEKEPGWQGLRELMEKQLTA-FDWGEAFVSLNLVVKPMIVESIFKPLQQQAWENNDTLLPLLIDSQLKDAERHSRW 264 (327)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHTTC-CSHHHHHHHHHHTHHHHHHHHTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCcchHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHCCChhhHHHHHHHHHHHHHHHHH
Confidence 112345677665433333333322 23678888875 5898754433433333333222356888899999999999999
Q ss_pred HHHHHHHHHhh
Q 018964 228 ACLLYSLLRKR 238 (348)
Q Consensus 228 ~~~l~~~l~~e 238 (348)
+..+++.+.++
T Consensus 265 ~~alvk~ll~~ 275 (327)
T 3ge3_B 265 SKALVKHALEN 275 (327)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHhcC
Confidence 99999988766
No 25
>3u52_A Phenol hydroxylase component PHN; 4-helix bundle, dioxygen, hydrocarbons, oxidore; HET: MPO EPE; 1.95A {Pseudomonas stutzeri} PDB: 2inn_A 2inp_A
Probab=96.79 E-value=0.1 Score=52.03 Aligned_cols=211 Identities=12% Similarity=0.009 Sum_probs=126.7
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----hHHH
Q 018964 72 WERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD-----SKEK 146 (348)
Q Consensus 72 ~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d-----~~e~ 146 (348)
...+++.-++.++..++.+..++-....+. ..+......+..+..+.+|++.|..|+..-+++...+... ...+
T Consensus 86 ~~~~d~~W~~~Lk~~l~al~~~EYgA~~~~-a~~~r~~~g~~~~na~~fqa~DeLRhAQ~~~~~~~~l~~~~~Gf~d~a~ 164 (511)
T 3u52_A 86 QNISDARYVNALKLFISGISPLEHAAFQGY-SKVGRQFSGAGARVACQMQAIDELRHSQTQQHAMSHYNKHFNGLHDGPH 164 (511)
T ss_dssp GGSSCGGGHHHHHHHHHHTHHHHHHHHHHH-HHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHH
T ss_pred cccCCHHHHHHHHHHhccccHHHHHHHHHH-HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccChhhh
Confidence 456788888888888888888875554443 3577888999999999999999999999888877666321 1111
Q ss_pred HHHHHHHhhcHHH---HHHHHHHHHHhcCchHHHHHHHHHH-HhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhh
Q 018964 147 HRLFNAIENIPCV---AQKAKWALDWIHSSDSFAERLVGFA-CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 222 (348)
Q Consensus 147 ~~~~~~~~~~p~l---~~k~~~i~~~~~~~~~~~~~lv~~~-~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~ 222 (348)
..+|.- +.| .++.+.+.. ..++.+|+.. ++|+++----|..+..++..+==..+..++.-+..||+
T Consensus 165 -------~~d~~W~~~~~R-~~vEd~~t~--Dw~E~~vA~nlv~E~l~tnLl~~~~~~~Aa~nGD~~t~t~~~s~qsDes 234 (511)
T 3u52_A 165 -------MHDRVWYLSVPK-SFFDDARSA--GPFEFLTAISFSFEYVLTNLLFVPFMSGAAYNGDMATVTFGFSAQSDEA 234 (511)
T ss_dssp -------HHTTCGGGHHHH-HHHHHHHHS--CHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -------hcCccccchhhH-HHHhhcccc--CHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHCCCHhHHHHHHHHHHHHH
Confidence 111221 222 233333322 3568888885 46776433333333334443333456777889999999
Q ss_pred hhHHHHHHHHHHHHhh-h-hHHHHHHHHHHHH----HH--HHHHH-HHhcCCCCCCCC-HHHHHHHHHH---HHHHHHHH
Q 018964 223 LHCDFACLLYSLLRKR-L-HWQKVHHMVHEAV----EI--ETQFV-CEALPCALIGMN-SSLMSQYIKF---VADRLLVA 289 (348)
Q Consensus 223 ~H~~f~~~l~~~l~~e-~-~~~~i~~l~~eav----~~--E~~~~-~~~~~~~~~Gl~-~~~~~~yi~y---~an~~L~~ 289 (348)
+|...+..++..+..+ + +...+..-++... +. -.+.+ +|..+... .+ ++..+.|++- ..-++|..
T Consensus 235 Rh~~w~~alvk~~l~~dp~Nr~llq~wl~~w~wra~~Al~~lg~~~dY~~p~r~--~s~~e~~~~~~e~~~~~~~~~L~~ 312 (511)
T 3u52_A 235 RHMTLGLEVIKFILEQHEDNVPIVQRWIDKWFWRGFRLLSLVSMMMDYMLPNKV--MSWSEAWEVYYEQNGGALFKDLER 312 (511)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCC--CCHHHHHHHHTHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc--ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999977643 2 2233333222221 11 12222 33334222 23 4455555433 23457899
Q ss_pred cCCCCC
Q 018964 290 LGCQRK 295 (348)
Q Consensus 290 lG~~~~ 295 (348)
+|++.+
T Consensus 313 ~Gl~~P 318 (511)
T 3u52_A 313 YGIRPP 318 (511)
T ss_dssp GTCCCC
T ss_pred hCCCCC
Confidence 999876
No 26
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=96.63 E-value=0.035 Score=50.87 Aligned_cols=169 Identities=18% Similarity=0.095 Sum_probs=93.2
Q ss_pred hcCCcCccc-cCccc-------chHHHh----cCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcC-ChHHHHHHHHH
Q 018964 54 QASFWTAEE-VDLSQ-------DVQHWE----RLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDI-QIPEARAFYGF 120 (348)
Q Consensus 54 ~~~fW~pee-id~s~-------D~~d~~----~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~-~~~E~~~~~~~ 120 (348)
....|.|++ ||.++ +..+|+ +||+..+.++...+--=-.+.+.++ . +.... .++....|...
T Consensus 28 ~~~~W~p~d~lPw~~~~~F~~~~~~~~~~~~~~L~d~~~~~l~~~~itEd~LP~Y~~-~----L~~~~~~d~~w~~w~~~ 102 (275)
T 1za0_A 28 TEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHR-E----LVEHFILEDWWGRWLGR 102 (275)
T ss_dssp TCCCCCGGGGCCGGGCCCCGGGTSCCCCGGGCCSCHHHHHHHHHHHHHHHC--------------------CHHHHHHHH
T ss_pred hhccCChhhcCCCcccccchhcccccccHhhccCCHHHHHHHHHHHHHhhcchHHHH-H----HHHhcCCCchHHHHhhh
Confidence 446799988 66442 344563 6888877766554311111111111 1 22222 13567778999
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHhhcHHHHHHHHHHHHHhcC-chHHHHHHHHHHHhhHHHHHhHHHHH
Q 018964 121 QIAMENIHSEMYSLLLETYI-KDSKEKHRLFNAIENIPCVAQKAKWALDWIHS-SDSFAERLVGFACVEGIFFSGSFCAI 198 (348)
Q Consensus 121 q~~~E~iH~esYs~il~~~~-~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~-~~~~~~~lv~~~~lEgi~f~s~F~~~ 198 (348)
..++|+.|+.+-..++-.-. .||... .... .-.+ .+-++. ..+-...++.-++-|..-+ .++.
T Consensus 103 WtaEE~rHg~aL~~YL~~sg~vdp~~l----E~~~-~~~i-------~~g~~~~~~~p~~~~vy~~fqE~aT~-v~y~-- 167 (275)
T 1za0_A 103 WTAEEHLHAIALREYLVVTREVDPVAN----EDVR-VQHV-------MKGYRAEKYTQVETLVYMAFYERCGA-VFCR-- 167 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSCTTTT----TCTT-C-----------------CCCHHHHHHHHHHHHHHHH-HHHH--
T ss_pred HhHHHHHHHHHHHHHHHHhCCCCHHHH----HHHH-HHHh-------hcCCCCCCCCHHHHHHHHHHHHHHHH-HHHH--
Confidence 99999999999999886433 255421 0000 0011 111111 1123344444356676532 2222
Q ss_pred HHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHH
Q 018964 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQK 243 (348)
Q Consensus 199 ~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~ 243 (348)
.+++..-=|-++++...|++||.+|..|...+++.+.+..|...
T Consensus 168 -n~a~~~~dPvL~~i~~~IA~DE~RH~~~y~~~v~~~le~dpd~~ 211 (275)
T 1za0_A 168 -NLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDET 211 (275)
T ss_dssp -HHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred -HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 33444446889999999999999999999999988876655443
No 27
>1mty_B Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1xvb_C 1fyz_C 1fz0_C 1fz2_C 1fz3_C 1fz4_C 1fz5_C 1fz6_C 1fz7_C 1fz8_C 1fz9_C 1fzh_C 1fzi_C 1xu3_C 1xu5_C 1fz1_C 1xvc_C 1xvd_C 1xve_C 1xvf_C ...
Probab=96.55 E-value=0.037 Score=53.22 Aligned_cols=164 Identities=10% Similarity=-0.137 Sum_probs=107.2
Q ss_pred HHhcCCHHHH-HHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---h-HH
Q 018964 71 HWERLLDSEK-HFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD---S-KE 145 (348)
Q Consensus 71 d~~~L~~~er-~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d---~-~e 145 (348)
.+..+++.-+ +.++..++.+..++-....+.. .+......+.++.+..+|++.|-.|+..-++.+..+..+ . ..
T Consensus 127 ~~~~ld~~w~~~~l~~~l~~~r~~Eyga~~~~a-~~~r~~~~~~i~na~~fqa~DeLRhaQ~~~~~~~~l~~~~~gf~~~ 205 (384)
T 1mty_B 127 QIRAMNPTWRDEFINRYWGAFLFNEYGLFNAHS-QGAREALSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDES 205 (384)
T ss_dssp GGGGSCHHHHHTTTTTHHHHHHHHHHHHHHTTH-HHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCC
T ss_pred ccccCCHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcch
Confidence 4556899999 8888889888888865555544 467888999999999999999999999988886655311 0 00
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHH-hcCchHHHHHHHHHH-HhhHHHHHhHHHH-HHHHHhcCCCCchHHHHHHHHhhhh
Q 018964 146 KHRLFNAIENIPCVAQKAKWALDW-IHSSDSFAERLVGFA-CVEGIFFSGSFCA-IFWLKKRGLMPGLTFSNELISRDEG 222 (348)
Q Consensus 146 ~~~~~~~~~~~p~l~~k~~~i~~~-~~~~~~~~~~lv~~~-~lEgi~f~s~F~~-~~~l~~~g~l~g~~~~i~~I~rDE~ 222 (348)
...-=..+.++|..+---+++.+. +.. ..+++.+|+.. ++|+++.---|.- +..++..+==..+..++.-+..||+
T Consensus 206 ~~~~k~~W~~dp~wq~~R~~vE~~~l~~-~Dw~E~~va~nlv~epl~~~L~~~~~~~~~Aa~nGD~~tp~l~~s~q~D~~ 284 (384)
T 1mty_B 206 TAVPKAEWTNGEVYKSARLAVEGLWQEV-FDWNESAFSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQ 284 (384)
T ss_dssp SHHHHHHHHHCSTTHHHHHHHHHHHHTC-CCHHHHHHHHHHTHHHHHHHHHHHTTHHHHGGGGTCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhCchhHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 000112344566554444444444 321 23678888875 4688754422222 2334433222334455566999999
Q ss_pred hhHHHHHHHHHHHH
Q 018964 223 LHCDFACLLYSLLR 236 (348)
Q Consensus 223 ~H~~f~~~l~~~l~ 236 (348)
+|...+..++..+.
T Consensus 285 Rh~~w~~alvk~ll 298 (384)
T 1mty_B 285 IAKQGVQDLYYNCL 298 (384)
T ss_dssp HHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998877
No 28
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=95.68 E-value=1.2 Score=41.77 Aligned_cols=172 Identities=12% Similarity=0.036 Sum_probs=92.2
Q ss_pred CCcCccccCcccchHHHhcCCHHHHHHHHHHHHHH-----HHHHHHHHhhHHHHHHhc--CC--hHHHHHHHHHHHHHHH
Q 018964 56 SFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFF-----AASDGIVLENLAARFLND--IQ--IPEARAFYGFQIAMEN 126 (348)
Q Consensus 56 ~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l-----~~~d~~v~~~l~~~~~~~--~~--~~E~~~~~~~q~~~E~ 126 (348)
.+|.|.+.-.--+-.-|..||+++|..+.+--..- ...+.++..-+...++.. .. ....+...-..+.+|+
T Consensus 58 ~~~~p~ellpl~gtp~w~~l~~eqR~~L~~~e~~~~~s~~I~~E~~lv~~~~r~i~~~~~p~~~~~~~~ya~ltei~DE~ 137 (336)
T 3chh_A 58 VPDYPLEIVPFAEHPLFLAAEPHQRQRVLTGMWIGYNERVIATEQLIAEPAFDLVMHGVFPGSDDPLIRKSVQQAIVDES 137 (336)
T ss_dssp SCSSCGGGCTTTTCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCSTTTTCHHHHHHHHHHHHHHH
T ss_pred CCCCChhhccccCCHhHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHH
Confidence 46776666555666789999999999776642221 223333333333334443 22 2344433356668999
Q ss_pred HHHHHHHHHHHH----hcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhc-CchHHHHHHHHH---HHhhHHHHHhHHHHH
Q 018964 127 IHSEMYSLLLET----YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIH-SSDSFAERLVGF---ACVEGIFFSGSFCAI 198 (348)
Q Consensus 127 iH~esYs~il~~----~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~-~~~~~~~~lv~~---~~lEgi~f~s~F~~~ 198 (348)
.|+.++.+..+. .+..+. +. . ..+.+-++. ...+. .+..+-..++.+ .+.|-+.= .+ .
T Consensus 138 ~Hs~Mf~~~~~~~~~~~G~~~~-----~~-~-p~~~l~r~l---~~~la~~~~~~~~~l~~~a~~lvaEeiid--~~--~ 203 (336)
T 3chh_A 138 FHTYMHMLAIDRTRELRKISER-----PP-Q-PELVTYRRL---RRVLADMPEQWERDIAVLVWGAVAETCIN--AL--L 203 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCC-----CC-C-CCCHHHHHH---HHHHTTCCCHHHHHHHHHHHHHHHHHSBC--HH--H
T ss_pred HHHHHHHHHHHHHHHHcCCCCC-----CC-C-ChHHHHHHH---HHHHccCchhhhhHHHHHHHHHHHHHHHH--HH--H
Confidence 999999999983 433300 00 0 001111111 12221 222222233322 23455421 11 1
Q ss_pred HHHHhcCCCCchH-HHHHHHHhhhhhhHHHHHHHHHHHHhhhhH
Q 018964 199 FWLKKRGLMPGLT-FSNELISRDEGLHCDFACLLYSLLRKRLHW 241 (348)
Q Consensus 199 ~~l~~~g~l~g~~-~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~ 241 (348)
-.+.+..-++.++ .+++.=.+||++|..|+..+++.+....++
T Consensus 204 r~~~~D~~vQP~vR~v~riHv~DEaRH~~fare~~~~~~~~l~~ 247 (336)
T 3chh_A 204 ALLARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNE 247 (336)
T ss_dssp HHHHTCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 1234444455555 444666899999999999999888776653
No 29
>2oc5_A Hypothetical protein; DUF3066 family protein, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.68A {Prochlorococcus marinus} SCOP: a.25.1.6
Probab=95.67 E-value=0.92 Score=39.03 Aligned_cols=199 Identities=12% Similarity=0.071 Sum_probs=107.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH--HHHHHHHHH
Q 018964 76 LDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK--EKHRLFNAI 153 (348)
Q Consensus 76 ~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~--e~~~~~~~~ 153 (348)
|+.=|++|.++=+-..-++.-.-+|... +...++. -+-=+..-+-||+.|.+.|.-.=+.+.-.|+ --.+.|...
T Consensus 28 s~~YkdAYSRINaIVIEGEqeA~dNyi~-la~llP~--~~dEL~rLakME~rH~kgF~aCGrNL~V~pDm~fA~~fF~~L 104 (244)
T 2oc5_A 28 SDRYKDAYSRINAIVIEGEQEAHDNYIA-IGTLLPD--HVEELKRLAKMEMRHKKGFTACGKNLGVEADMDFAREFFAPL 104 (244)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCGG--GHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHhheeeEechHHHHHhHHH-HHHHCcc--cHHHHHHHHHHHHHHHhHHHHhccCCcCCCCcHHHHHHHHHH
Confidence 5677899999988888888777777653 5555443 3444777788999999999998888864442 222344333
Q ss_pred hhcHHHHHHHHHHHHHhcCchHHHHHHHHH-HHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHH
Q 018964 154 ENIPCVAQKAKWALDWIHSSDSFAERLVGF-ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 232 (348)
Q Consensus 154 ~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~-~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~ 232 (348)
..+ .+++ .... .....++.- .++|.. ..+.|-+. + .-.=|-..++-.-+.+||..|..||..-+
T Consensus 105 H~n---Fq~A------~~~g-kv~TCLlIQaLiIE~F-AIaAYniY--I--pVAD~FARkITegVVkDEY~HLNfGe~WL 169 (244)
T 2oc5_A 105 RDN---FQTA------LGQG-KTPTCLLIQALLIEAF-AISAYHTY--I--PVSDPFARKITEGVVKDEYTHLNYGEAWL 169 (244)
T ss_dssp HHH---HHHH------HHTT-CHHHHHHHHHTHHHHH-HHHHHHHH--G--GGSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH---HHHH------HhcC-CeeehHHHHHHHHHHH-HHHHHhhc--c--ccccHHHHHHHHhHHhhHHhhcchHHHHH
Confidence 211 1111 1111 122222222 245541 12222221 1 01112334566778999999999997654
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCHHHH-HHHHHHHHHHHHHHcCCCC
Q 018964 233 SLLRKRLHWQKVHHMVHEAVEIETQFVCEAL-PCALIGMNSSLM-SQYIKFVADRLLVALGCQR 294 (348)
Q Consensus 233 ~~l~~e~~~~~i~~l~~eav~~E~~~~~~~~-~~~~~Gl~~~~~-~~yi~y~an~~L~~lG~~~ 294 (348)
+.-.. -+++++.+.-++..-+-...++..- +-.++|++++.+ .+|+- .-...|.++|+..
T Consensus 170 k~~f~-~~K~el~~ANr~nLPlv~~MLnqV~~Da~vL~MekealvedFmi-~YgEAL~~IGF~t 231 (244)
T 2oc5_A 170 KANLE-SCREELLEANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLI-AYQESLTEIGFNT 231 (244)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH-HHHHHHHHHTCCH
T ss_pred HHHHH-HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHH-HHHHHHHHcCCcH
Confidence 32211 1223333322222222222222111 235788997655 45543 4566788899863
No 30
>3pf7_A Benzoyl-COA oxygenase component B; DIIRON center, epoxidase, benzoyl coenzyme A, oxidoreductase; 1.90A {Azoarcus evansii} PDB: 3per_A 3pm5_A* 3q1g_A
Probab=94.92 E-value=0.23 Score=48.03 Aligned_cols=151 Identities=9% Similarity=0.005 Sum_probs=90.1
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCChHHHHHH
Q 018964 71 HWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLL-ETYIKDSKEKHRL 149 (348)
Q Consensus 71 d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il-~~~~~d~~e~~~~ 149 (348)
.|+.+|+.=|..+.++++.++-++-.-..-- ..+....++-..+.-+.....+|.-|...+.+++ +.++.|.. +.
T Consensus 97 ~WqemP~eYR~~LiRlI~~haDSEiagve~e-~~wi~~APSL~~k~~L~aiVqDE~gHg~~mlyllae~fG~Dr~---e~ 172 (481)
T 3pf7_A 97 VWQEVPGEYRSTLRRIIVTQGDTEPASVEQQ-RHLGLTAPSLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGR---EE 172 (481)
T ss_dssp CBSSCCGGGHHHHHHHHHHHHHHHHHHHHHH-TTGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHH---HH
T ss_pred chhhCCHHHHHHHHHHHHHHhhhHHhhchhh-hhHHhcCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH---HH
Confidence 3889999999999999998877663332221 1234455666665555555779999999888888 66653332 22
Q ss_pred HHHHhhcHHHHHHHH------HHHHHhcCc-hHHHHHHHHH-HHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhh
Q 018964 150 FNAIENIPCVAQKAK------WALDWIHSS-DSFAERLVGF-ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 221 (348)
Q Consensus 150 ~~~~~~~p~l~~k~~------~i~~~~~~~-~~~~~~lv~~-~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE 221 (348)
.+.. .+|.. .....++-+ .+++.. ++| .++.+. +-.-+..|.+. -.--++...+.|+..|
T Consensus 173 ad~L------L~R~sGd~~~pk~L~~FNyPt~~WaD~-~~f~~LvDrA----gi~qL~~L~~s-SY~PlARamr~I~kEE 240 (481)
T 3pf7_A 173 GEAL------LERRSGDEDNPRILTAFNEKTPDWLSF-FMFTFITDRD----GKFQLASLAES-AFDPLARTCKFMLTEE 240 (481)
T ss_dssp HHHH------HHCCTTCSSSCCSSGGGSSCCCSHHHH-HHHHHHTHHH----HHHHHHHHTTC-SBHHHHHHHHHHHHHH
T ss_pred HHHH------HhhccCCcccccccccccCCCCCHHHH-HHHHHhhhHH----HHHHHHHHHhC-CcHHHHHHHHHHhhHH
Confidence 2211 11100 001112212 234443 334 345553 22233344443 3445788899999999
Q ss_pred hhhHHHHHHHHHHHHh
Q 018964 222 GLHCDFACLLYSLLRK 237 (348)
Q Consensus 222 ~~H~~f~~~l~~~l~~ 237 (348)
+.|...|-..+..+..
T Consensus 241 afH~~~Ge~gl~rli~ 256 (481)
T 3pf7_A 241 AHHLFVGESGIARVIQ 256 (481)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999987776654
No 31
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=90.79 E-value=4.1 Score=30.90 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=54.4
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHH
Q 018964 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKE 145 (348)
Q Consensus 73 ~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e 145 (348)
.+||+..++...-+-+..+-++.+ ++=...+...++|+++.++.-.+..|..|+-.+-.+|+.+ ||..
T Consensus 11 ~~ls~~~~d~~rai~aL~~EleAI---~~Y~q~A~~t~D~evk~vl~~iadEEkeH~g~~l~~Lrr~--dp~~ 78 (95)
T 1zpy_A 11 QELSDETRDMHRAIISLREELEAV---DLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRC--DPAF 78 (95)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CHHH
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CHHH
Confidence 479999999888777555555533 3334577889999999999999999999999999999977 6653
No 32
>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4
Probab=86.70 E-value=15 Score=31.70 Aligned_cols=200 Identities=15% Similarity=0.064 Sum_probs=119.7
Q ss_pred HHHHHHhcCCcCc-cccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHH-
Q 018964 48 EMYKKAQASFWTA-EEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAME- 125 (348)
Q Consensus 48 ~lykk~~~~fW~p-eeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E- 125 (348)
.|.++.. |.+ ...|+-+...+ .+||++.-..+..--..+. . .+.+.+. ......++++.+..+...+..|
T Consensus 11 ~L~~~~~---~~~~~~HPf~~~l~~-G~L~~e~~~~yl~qdy~yl--~-~f~~~~a-~~~~~~~~~~~~~~~~~~i~~e~ 82 (231)
T 1rcw_A 11 QLDLIIQ---NKHMLEHTFYVKWSK-GELTKEQLQAYAKDYYLHI--K-AFPKYLS-AIHSRCDDLEARKLLLDNLMDEE 82 (231)
T ss_dssp HHHHHHH---HTCGGGSHHHHHHHT-TCCCHHHHHHHHHHTHHHH--H-HHHHHHH-HHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HhhcccCHHHHHHhC-CCCCHHHHHHHHHHhHHHH--H-HHHHHHH-HHHhcCCCHHHHHHHHHHHHHhc
Confidence 4555444 544 45555443321 2687665443332211111 1 1222222 3445678899888888777777
Q ss_pred ---HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhHHHHHhHHHH-H-HH
Q 018964 126 ---NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCA-I-FW 200 (348)
Q Consensus 126 ---~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~~lEgi~f~s~F~~-~-~~ 200 (348)
..|.+.|...++.++.++++ .....-.|..+.-.+++.+...+. ++...+.++.+.|++.- ..+. . -.
T Consensus 83 ~~~~~h~~l~~~~~~~~Gi~~~~----~~~~~~~p~t~~y~~~~~~~~~~~-~~~~~laal~~~E~~~~--~~~~~~~~~ 155 (231)
T 1rcw_A 83 NGYPNHIDLWKQFVFALGVTPEE----LEAHEPSEAAKAKVATFMRWCTGD-SLAAGVAALYSYESQIP--RIAREKIRG 155 (231)
T ss_dssp SSSSCHHHHHHHHHHHTTCCHHH----HHHCCCCHHHHHHHHHHHHHHTSS-CHHHHHHHHHHHHTTHH--HHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHcCCCHHH----HhcCCCCHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 68999999999999877753 233445677777777777766543 35566666445566531 1111 1 11
Q ss_pred HHh-cCCC--CchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC
Q 018964 201 LKK-RGLM--PGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEALP 264 (348)
Q Consensus 201 l~~-~g~l--~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~~~~~~~ 264 (348)
+.. .+.. -+..---.++.-| ..|+..+..++..+.. ...+++.+.+..+.+.|..|-+.++.
T Consensus 156 ~~~~~~wi~~~~~~~f~~h~~~d-~~h~~~~~~~l~~~~~-~~~~~~~~~~~~~~~le~~fwd~~~~ 220 (231)
T 1rcw_A 156 LTEYFGFSNPEDYAYFTEHEEAD-VRHAREEKALIEMLLK-DDADKVLEASQEVTQSLYGFLDSFLD 220 (231)
T ss_dssp HHHHSCCCSGGGGHHHHHHHHHH-HHHHHHHHHHHHHHCS-SCHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHCCCCChhhhHHHHHHHHHh-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 2433 2333444566667 4699999888877755 34578999999999999999987663
No 33
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=86.11 E-value=21 Score=33.05 Aligned_cols=152 Identities=14% Similarity=0.062 Sum_probs=89.8
Q ss_pred HHHhcCChHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHH
Q 018964 104 RFLNDIQIPEARAFYGFQIAME-------NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSF 176 (348)
Q Consensus 104 ~~~~~~~~~E~~~~~~~q~~~E-------~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~ 176 (348)
.+....++++.+..+.....+| ..|.+.|..+++.++.+++ +......|....-.+.......+. ++
T Consensus 162 ~~~a~~~~~~~r~~l~e~i~DE~G~g~~e~~H~el~~~~l~~lGld~~-----~~~~~~~p~~~~~v~~~~~~~~~~-~~ 235 (332)
T 3bjd_A 162 DLLVNLTDVDEAAALARYLYGELGEEDEKGSHPRLLAKLLEAIGLEAD-----FQAVSTMPEEIAYLNNRARAFRHA-EV 235 (332)
T ss_dssp HHHHTCCSHHHHHHHHHHHHHHTTTTCGGGCHHHHHHHHHHHTTCCCC-----TTCCCCCHHHHHHHHHHHHHHHCS-ST
T ss_pred HHHcCCCCHHHHHHHHHHHHHHhCCCCccccHHHHHHHHHHHcCCChh-----HhcccCCHHHHHHHHHHHHHHhcC-CH
Confidence 3456678899888888776766 3679999999999987764 233334565555555555444332 24
Q ss_pred HHHHHHHHHhhHHHHHhHHHHH-HHHHhcCCCC-chHHHHHHHHhhhhhhH-HHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 018964 177 AERLVGFACVEGIFFSGSFCAI-FWLKKRGLMP-GLTFSNELISRDEGLHC-DFACLLYSLLRKRLHWQKVHHMVHEAVE 253 (348)
Q Consensus 177 ~~~lv~~~~lEgi~f~s~F~~~-~~l~~~g~l~-g~~~~i~~I~rDE~~H~-~f~~~l~~~l~~e~~~~~i~~l~~eav~ 253 (348)
...+.++.+.|+... .+|.-+ -.+.+.|.-+ +..---.+|.-|. .|. .....+...+........+...+..+++
T Consensus 236 ~~alaal~~~E~~~p-~~y~~i~~~l~~~g~~~~~~~yf~~HI~lD~-~H~~~~~~~ll~~~~~~~~q~~~~~a~~~~l~ 313 (332)
T 3bjd_A 236 GWGLAVFYITELVVP-GNHEKLYRALLQAGLSEDQAEYYKVHISLVP-PRAKREWQLIARRIPDVQFQNAFLTSLSQHFR 313 (332)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCCTTTTHHHHHHHHHCC----CTTHHHHHTTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhH-HHHHHHHHHHHHcCCCcccchHHHHHHHHhH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 455555577899753 344333 3666666523 4466668888898 488 4333333333211122345555555568
Q ss_pred HHHHHHHHhc
Q 018964 254 IETQFVCEAL 263 (348)
Q Consensus 254 ~E~~~~~~~~ 263 (348)
.+..|.+.+.
T Consensus 314 ~~~~f~D~l~ 323 (332)
T 3bjd_A 314 VERAYYDAIW 323 (332)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888876554
No 34
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=80.79 E-value=25 Score=29.75 Aligned_cols=123 Identities=18% Similarity=0.120 Sum_probs=70.7
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH----HHHHHHHHHhhcHHHHHHHHHHHHHhc-CchHHHH
Q 018964 104 RFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK----EKHRLFNAIENIPCVAQKAKWALDWIH-SSDSFAE 178 (348)
Q Consensus 104 ~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~----e~~~~~~~~~~~p~l~~k~~~i~~~~~-~~~~~~~ 178 (348)
..+..-.-+++...+...+..|..|++-|..++..+-.+.. +..++.. -...|. ..+. +.++.-+
T Consensus 49 ~~A~~EG~~~IA~~F~~~A~~E~~HA~r~~kll~~l~~~~~~~~~~~~~~v~-~~~~p~---------~~~~~T~eN~~~ 118 (179)
T 3qhb_A 49 EIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVS-TIESQI---------DAVASDSRGLRR 118 (179)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCHHHHHHHHHHH-HHHHTH---------HHHHHSHHHHHH
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccc-cccccc---------cccCcHHHHHHH
Confidence 34445556889999999999999999999999876532210 0001111 111221 1111 1122111
Q ss_pred HHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018964 179 RLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236 (348)
Q Consensus 179 ~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~ 236 (348)
.|-+-.--|.--.-..|-.+.-.++.--++.++..++.|.+||..|......++..|.
T Consensus 119 ~L~~A~~GE~~E~~~mYp~fA~~A~eEG~~eiA~~F~~ia~~Ek~H~~ry~~ll~~l~ 176 (179)
T 3qhb_A 119 ALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLL 176 (179)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1221122233222222333333366656899999999999999999998888877664
No 35
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=80.56 E-value=16 Score=27.54 Aligned_cols=67 Identities=15% Similarity=0.217 Sum_probs=52.1
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 018964 73 ERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 144 (348)
Q Consensus 73 ~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~ 144 (348)
.+||+..++...-+.+.-+-+|.+ ++=...+..+.+|+++..+.-.+-.|-.|.-.+..+|+.+ ||.
T Consensus 11 e~Ls~e~~d~~Rai~sl~~EleAI---~~Y~q~a~~~~d~~~k~vl~~i~~EEkeH~g~~lelLrr~--Dp~ 77 (95)
T 3k6c_A 11 QELSDETRDMHRAIISLREELEAV---DLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRC--DPA 77 (95)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CHH
Confidence 479999888777766544444433 3333467788999999999999999999999999999976 664
No 36
>1otk_A Protein PAAC, phenylacetic acid degradation protein PAAC; structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: a.25.1.2 PDB: 3pvt_B* 3pvr_B* 3pvy_B* 3pw1_B* 3pw8_A* 3pwq_A
Probab=73.54 E-value=49 Score=29.41 Aligned_cols=171 Identities=9% Similarity=0.024 Sum_probs=100.2
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-ChHHHHHHHHHHhhcHHHHHHHHHHHH-HhcC-chHHHHHH
Q 018964 105 FLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY-IK-DSKEKHRLFNAIENIPCVAQKAKWALD-WIHS-SDSFAERL 180 (348)
Q Consensus 105 ~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~-~~-d~~e~~~~~~~~~~~p~l~~k~~~i~~-~~~~-~~~~~~~l 180 (348)
-....|.-|.+..++..+-+|.=|++.+-.+..++ +. |+++ + . +...+. ++-+- .++- ..+|+..+
T Consensus 26 W~~~AP~LEediAlanialDelGhar~ly~~a~~l~G~~~~D~---L-a-~~R~~~-----~frn~~l~e~P~gdwa~ti 95 (249)
T 1otk_A 26 WCGHAPELEIDLALANIGLDLLGQARNFLSYAAELAGEGDEDT---L-A-FTRDER-----QFSNLLLVEQPNGNFADTI 95 (249)
T ss_dssp TTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHH---H-H-HSCCGG-----GCCCCGGGGSCCCSHHHHH
T ss_pred HHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH---H-H-HhcCHH-----HhhccHHHcCCCCCHHHHH
Confidence 34566778889999999899999999999999988 65 3332 2 1 111111 00000 1111 22455444
Q ss_pred HHHHHhhHHHHHhHHHHHHHHH-hcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 018964 181 VGFACVEGIFFSGSFCAIFWLK-KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259 (348)
Q Consensus 181 v~~~~lEgi~f~s~F~~~~~l~-~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~~ 259 (348)
+.. +++.++..+.+-. .+.--+.++.+..+|++.|..|..++...+..|... .++-++.+.+|++.=--++
T Consensus 96 ~r~------~l~d~~~~~~~~~L~~ss~~plA~ia~K~~kEe~yH~~h~~~w~~rL~~g--T~Es~~r~Q~Al~~~wp~~ 167 (249)
T 1otk_A 96 ARQ------YFIDAWHVALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNG--TDVSGQKMQQAINKLWRFT 167 (249)
T ss_dssp HHH------HHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CHHHHHHHHHHHHHHGGGT
T ss_pred HHH------HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHH
Confidence 322 3445555543222 334468899999999999999999999887777632 2344566666666433333
Q ss_pred HHhcCCC---------CCCCCHHHHHHHHHHHHHHHHHHcCCC
Q 018964 260 CEALPCA---------LIGMNSSLMSQYIKFVADRLLVALGCQ 293 (348)
Q Consensus 260 ~~~~~~~---------~~Gl~~~~~~~yi~y~an~~L~~lG~~ 293 (348)
...|+.+ -++.+.+++.+=-.-.....|..+|++
T Consensus 168 ~elF~~~~~~~~l~~~Gi~~~~~~Lr~~w~~~v~~~l~~agL~ 210 (249)
T 1otk_A 168 AELFDADEIDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLN 210 (249)
T ss_dssp GGGGCCCHHHHHHHHTTSSCCGGGGHHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCCccHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 3333211 122344445444444566677788875
No 37
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=68.57 E-value=26 Score=31.69 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=36.0
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChH
Q 018964 103 ARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIK-DSK 144 (348)
Q Consensus 103 ~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~-d~~ 144 (348)
..++.....|-++..++..+.+|+.|..+|.++++.++. +|+
T Consensus 167 ~n~a~~~~dPvL~~i~~~IA~DE~RH~~~y~~~v~~~le~dpd 209 (275)
T 1za0_A 167 RNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRD 209 (275)
T ss_dssp HHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 346678889999999999999999999999999998863 554
No 38
>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*
Probab=61.35 E-value=87 Score=27.69 Aligned_cols=139 Identities=11% Similarity=-0.041 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHH-------HHHHHHHHHH-HhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 018964 112 PEARAFYGFQIAMENI-------HSEMYSLLLE-TYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGF 183 (348)
Q Consensus 112 ~E~~~~~~~q~~~E~i-------H~esYs~il~-~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~ 183 (348)
++...-+..-..+|.= |.+.|.+.++ .++.|++. ..-.|.-++-++-+.+++ ++. ...++-|+
T Consensus 72 ~~~~~eL~~NL~EE~G~~d~~~~H~~lyRr~L~~~lGld~~~-------~~p~~sT~~~idt~~~lc-s~d-~~~aLGA~ 142 (244)
T 3b5o_A 72 NGVAQELQENIDEEMGSTTGGISHYTLLADGLEEGLGVAVKN-------TMPSVATSKLLRTVLSLF-DRQ-VDYVLGAT 142 (244)
T ss_dssp HHHHHHHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHCCCCTT-------CCCCHHHHHHHHHHHHHH-TSC-HHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHhcCCCccc-------cCCCchHHHHHHHHHHHh-CCC-HHHHHHHH
Confidence 5555555555566754 9999999999 99878753 133355555666666677 443 35666666
Q ss_pred HHhhHHHHHh--HHHHH-HHHHhcCCCCc-hHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 018964 184 ACVEGIFFSG--SFCAI-FWLKKRGLMPG-LTFSNELISR-DEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258 (348)
Q Consensus 184 ~~lEgi~f~s--~F~~~-~~l~~~g~l~g-~~~~i~~I~r-DE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~ 258 (348)
+.+|++.-+- -+.-+ -.|.+. ..|. .-.-.++=.. +|.-|..-...++....+......+.+-...+++....|
T Consensus 143 yatE~iaipe~~ly~~li~gL~~~-~~~~~~l~FF~~HidelE~~Ha~~l~~~l~~~~~~eef~~~~~G~~~~Lda~~~f 221 (244)
T 3b5o_A 143 YAIEATSIPELTLIVKLVEWLHEG-AIPKDLQYFFSKHLDEWEIEHEAGLRTSVAAYIQPEEFGEFAAGFRAMIDAMQVW 221 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSS-CCCHHHHHHHHHHHC-------CHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhHHHHHHHHHHHHHhC-CCchhHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHH
Confidence 7899984431 12222 234333 3343 2233333323 778899888877765544433567777777777776666
Q ss_pred HH
Q 018964 259 VC 260 (348)
Q Consensus 259 ~~ 260 (348)
-+
T Consensus 222 Wd 223 (244)
T 3b5o_A 222 WQ 223 (244)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 39
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=61.05 E-value=31 Score=26.00 Aligned_cols=55 Identities=7% Similarity=-0.062 Sum_probs=40.6
Q ss_pred HHHHHHHHHHH-hhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHH
Q 018964 175 SFAERLVGFAC-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 235 (348)
Q Consensus 175 ~~~~~lv~~~~-lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l 235 (348)
.+.+++.+... +|.|.+|...+.. -.-|.+..++..|+.+|-.|.+....+++.+
T Consensus 19 d~~Rai~sl~~EleAI~~Y~q~a~~------~~d~~~k~vl~~i~~EEkeH~g~~lelLrr~ 74 (95)
T 3k6c_A 19 DMHRAIISLREELEAVDLYNQRVNA------CKDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35666665543 7888887766554 4568899999999999999999777665443
No 40
>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=60.92 E-value=81 Score=27.19 Aligned_cols=147 Identities=9% Similarity=-0.031 Sum_probs=83.3
Q ss_pred hcCChHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 018964 107 NDIQIPE--ARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFA 184 (348)
Q Consensus 107 ~~~~~~E--~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~ 184 (348)
...++++ .+..+...+..|.-|-..+-+-++.++.++++ .....-.|....-++++....... +....+.+.+
T Consensus 64 ~ka~~~~~~~~~~~~~~~~~e~~~e~~~~~~l~~~G~~~~~----~~~~~~~pat~aY~~~l~~~a~~~-~~~~~la~~~ 138 (239)
T 3dde_A 64 IMGKDLPGKYLSFCFHHAHEEAGHELMALSDIASIGFDRED----VLSSKPLPATETLIAYLYWISATG-NPVQRLGYSY 138 (239)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHTTTHHHHHHHHHHTTCCHHH----HHTCCCCHHHHHHHHHHHHHHHSS-CGGGGHHHHH
T ss_pred HhCCCchHHHHHHHHHHHHHHHChHHHHHHHHHHhCCCHHH----HHhCCCChHHHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 4456655 66677777777766665655558888766643 333455777777777777665432 2233444456
Q ss_pred HhhHHHHHhHHHHHHHHHhc-CCCCc--hHHHHHHHHhhhhhhHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHH
Q 018964 185 CVEGIFFSGSFCAIFWLKKR-GLMPG--LTFSNELISRDEGLHCDFACLLYSLLR-KRLHWQKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 185 ~lEgi~f~s~F~~~~~l~~~-g~l~g--~~~~i~~I~rDE~~H~~f~~~l~~~l~-~e~~~~~i~~l~~eav~~E~~~~~ 260 (348)
++|++.-.++-. .-.+.+. | +|. +.-..-...-|+ -|......+++.+. .+-..+.|.+..+.+.+....+.+
T Consensus 139 ~~E~~y~~~~~~-~~~l~~~~~-l~~~~~~f~~~h~~~d~-~h~~~~~~~ld~~~~~~~~~~~ii~~a~~~~~l~~~~f~ 215 (239)
T 3dde_A 139 WAENVYGYIDPV-LKAIQSTLD-LTPQSMKFFIAHSKIDA-KHAEEVNEMLHEVCKTQEDVDSVVAVMENSLVLTARILD 215 (239)
T ss_dssp HHHTCHHHHHHH-HHHHHHHTT-CCGGGGHHHHHHHHHHH-HHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHH-HHHHHHHhC-cCHHHHHHHHHHHhcch-hHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789985112222 2233333 4 443 233333333455 58887777776663 233345666666677776666554
Q ss_pred H
Q 018964 261 E 261 (348)
Q Consensus 261 ~ 261 (348)
.
T Consensus 216 ~ 216 (239)
T 3dde_A 216 D 216 (239)
T ss_dssp H
T ss_pred H
Confidence 3
No 41
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=59.24 E-value=39 Score=25.48 Aligned_cols=55 Identities=7% Similarity=-0.062 Sum_probs=41.9
Q ss_pred HHHHHHHHHHH-hhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHH
Q 018964 175 SFAERLVGFAC-VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 235 (348)
Q Consensus 175 ~~~~~lv~~~~-lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l 235 (348)
++.+++.+... +|+|-+|...+.. -.-|.+..+..-|+.+|-.|++....+++.+
T Consensus 19 d~~rai~aL~~EleAI~~Y~q~A~~------t~D~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 19 DMHRAIISLREELEAVDLYNQRVNA------CKDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46667666543 8999998877665 4568899999999999999999766654444
No 42
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=57.73 E-value=89 Score=26.64 Aligned_cols=113 Identities=12% Similarity=-0.026 Sum_probs=67.9
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 018964 105 FLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFA 184 (348)
Q Consensus 105 ~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~ 184 (348)
.+..-.-+++..++..++..|..|++-|..++..+..++. + .+ .|. ..+.+ ..+.|-.-.
T Consensus 53 ~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~----i--~~--~p~---------~~~gs---t~enL~~a~ 112 (202)
T 1yuz_A 53 AAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYE----K--PT--VAA---------PSAYS---CDLNLISGA 112 (202)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCC----C--CC--C-----------CCCCC---HHHHHHHHH
T ss_pred HHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce----e--cc--CCc---------cCCCC---HHHHHHHHH
Confidence 3444556889999999999999999999999998755542 1 11 121 00111 111111111
Q ss_pred HhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 018964 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK 237 (348)
Q Consensus 185 ~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~ 237 (348)
--|.--....+--+.-.++.-....++..+++|.++|..|......++..+..
T Consensus 113 ~gE~~E~t~my~~~a~~A~eEgd~~~a~~f~~i~~~E~~H~~~~~~ll~~l~~ 165 (202)
T 1yuz_A 113 NGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYNDIDA 165 (202)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12222221222223333555557889999999999999999988877766553
No 43
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=56.66 E-value=79 Score=25.74 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=69.4
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-h--HHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHH
Q 018964 103 ARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD-S--KEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAER 179 (348)
Q Consensus 103 ~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d-~--~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~ 179 (348)
..++..+++|+++..+..-+.+|..|++.+..++..+.++ + .....++..+ .|. ...+....+.. .
T Consensus 40 ~~~A~~~~~~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~-~ 108 (175)
T 2fzf_A 40 KSLAEKIKIEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPEL--QPV--------ARELEKVQDII-D 108 (175)
T ss_dssp HHHHHSCCCTTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCSCCBSCCC--CCC--------CSCCCSHHHHH-H
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhhh--hhh--------HHhccccCCHH-H
Confidence 3577788899999999999999999999999999877321 1 0000001000 000 00001111111 1
Q ss_pred HHHHH-Hhh--HHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 018964 180 LVGFA-CVE--GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK 237 (348)
Q Consensus 180 lv~~~-~lE--gi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~ 237 (348)
.+..+ -.| ++-||..++-. -.=|.+..++..|++||..|......++..+..
T Consensus 109 ~L~~ai~~E~~a~~~Y~~~a~~------~~d~~~r~l~~~ia~eE~~H~~~l~~~l~~l~~ 163 (175)
T 2fzf_A 109 LIRWAMKAEEIAAEFYLKLEEM------VKEEEKKRLMRYLADMERGHYYTLRAEYELLLN 163 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT------SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22221 223 34444444332 223889999999999999999988877766643
No 44
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=56.19 E-value=86 Score=25.98 Aligned_cols=100 Identities=8% Similarity=-0.059 Sum_probs=60.3
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHH
Q 018964 103 ARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVG 182 (348)
Q Consensus 103 ~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~ 182 (348)
...+..-.-|++...+..++..|..|++-.-..|..+ ++.. ..|+.-++
T Consensus 29 A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~i-~~t~------------enL~~a~~------------------ 77 (170)
T 3pwf_A 29 AEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKL-GKTP------------ENLQMGIE------------------ 77 (170)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCHH------------HHHHHHHH------------------
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CChH------------HHHHHHHH------------------
Confidence 3455566678999999999999999998665544321 1111 01110000
Q ss_pred HHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018964 183 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236 (348)
Q Consensus 183 ~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~ 236 (348)
-=.-|..-.|..|+ -.++.--...++..+++|.+||..|......++..+.
T Consensus 78 gE~~e~~~mY~~~a---~~A~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~ 128 (170)
T 3pwf_A 78 GETFEVEEMYPVYN---KAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAE 128 (170)
T ss_dssp HHHHHHHTHHHHHH---HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHH---HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00001111222222 2344444688999999999999999998888877664
No 45
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=52.85 E-value=70 Score=29.77 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=32.6
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018964 104 RFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140 (348)
Q Consensus 104 ~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~ 140 (348)
.++.....|-++..++..+.+|+.|..+|.++++.++
T Consensus 183 r~A~~~gdPvLa~i~~~IA~DE~RH~~~Y~~~v~~~l 219 (338)
T 2uw1_A 183 KLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLA 219 (338)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455678999999999999999999999999999875
No 46
>2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A
Probab=50.90 E-value=1.3e+02 Score=26.49 Aligned_cols=142 Identities=11% Similarity=-0.081 Sum_probs=83.6
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 018964 106 LNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFAC 185 (348)
Q Consensus 106 ~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~~ 185 (348)
+...++ +....+..++... +. ..+..+++.++.++++ + ....|.-+.-.+++.....+ .++...++++..
T Consensus 106 ~aka~~-~~~~~~~~~~~~~-~~-~lh~~~~~~~Gi~~~~---~---~~~~pat~aYt~~ll~~a~~-g~~~~~laAl~p 175 (258)
T 2a2m_A 106 ATCAQD-ETLREFFKAKAKS-YD-EYNETYHQTWHLREAS---G---LIPGTDIKDYADYEAYVAGS-LASPYMCVVMLP 175 (258)
T ss_dssp HHTCSS-HHHHHHHHHHHHH-HH-HHHHHHHHTSCBCCGG---G---BCCCHHHHHHHHHHHHHHHH-SCTHHHHHHHHH
T ss_pred HHhCCc-HHHHHHHHHHHHH-HH-HHHHHHHHHcCCCHHH---c---cCCCHHHHHHHHHHHHHHhc-CCHHHHHHHHHH
Confidence 344555 4444443333222 11 4455666777655443 1 34457777777777665432 246777777777
Q ss_pred hhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHH---hhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 018964 186 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS---RDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFVCEA 262 (348)
Q Consensus 186 lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~---rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~~~~~ 262 (348)
++.++...|- .+..... +. .---.||. .|| -++.....++..+....+.+++.+++..+++.|..|-+..
T Consensus 176 C~~~Y~eig~----~l~~~~~-~~-~~Y~~WI~~~Y~~~-~~v~~~~~lld~~~~~~~~~~l~~~F~~a~~lE~~Fwd~a 248 (258)
T 2a2m_A 176 CEYLWPWIAN----FLDGYTP-TN-SLYRFWIEWNGGTP-NGAYQMGNMLEQYRDKIDEDKAVEIFNTAMNYELKVFTSS 248 (258)
T ss_dssp HHHHHHHHHH----HHGGGSC-TT-STTHHHHHHHCSCC-HHHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH----HHHhccC-CC-chHHHHHHhccCCH-HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHh
Confidence 7776544332 2222211 22 22345666 777 6777777777666544457789999999999999998877
Q ss_pred cC
Q 018964 263 LP 264 (348)
Q Consensus 263 ~~ 264 (348)
+.
T Consensus 249 ~~ 250 (258)
T 2a2m_A 249 TI 250 (258)
T ss_dssp TC
T ss_pred hh
Confidence 63
No 47
>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A
Probab=48.80 E-value=1.4e+02 Score=26.29 Aligned_cols=150 Identities=11% Similarity=-0.077 Sum_probs=95.0
Q ss_pred HHhcCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 018964 105 FLNDIQIPEARAFYGFQIAME-NIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGF 183 (348)
Q Consensus 105 ~~~~~~~~E~~~~~~~q~~~E-~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~ 183 (348)
.....++++...++..++... ......+..+++.++.++++ .......|....-.+++.....+ .++...++++
T Consensus 85 a~aka~~~~~~~~l~~~i~~~~~~E~~lh~~~~~~~Gi~~~~----l~~~~~~pat~aYt~~l~~~a~~-g~~~~~laAl 159 (263)
T 2qcx_A 85 GAAYAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEE----RKAFKPSPTAYSFTSHMYRSVLS-GNFAEILAAL 159 (263)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHH----HHSCCCCHHHHHHHHHHHHHHTT-TCHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH----HhhCCCChHHHHHHHHHHHHHhc-CCHHHHHHHH
Confidence 334567788777776664432 12345555667888767653 33455567777777888776543 3467777777
Q ss_pred HHhhHHHHHhHHHHHHHHHhcCCCCc--hHHHHHHHHhhh-hhhHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHH
Q 018964 184 ACVEGIFFSGSFCAIFWLKKRGLMPG--LTFSNELISRDE-GLHCDFACLLYSLLRKRLH---WQKVHHMVHEAVEIETQ 257 (348)
Q Consensus 184 ~~lEgi~f~s~F~~~~~l~~~g~l~g--~~~~i~~I~rDE-~~H~~f~~~l~~~l~~e~~---~~~i~~l~~eav~~E~~ 257 (348)
..+|.++...|- .+..... |. ..+=|+.=.-+| .-|+.....++..+....+ .+++.+++..+++.|..
T Consensus 160 ~pC~w~Y~~ig~----~l~~~~~-~~~~Y~~WI~~y~~~df~~~v~~~~~lld~l~~~~s~~~~~~l~~~F~~a~~lE~~ 234 (263)
T 2qcx_A 160 LPCYWLYYEVGE----KLLHCDP-GHPIYQKWIGTYGGDWFRQQVEEQINRFDELAENSTEEVRAKMKENFVISSYYEYQ 234 (263)
T ss_dssp HHHHHHHHHHHH----HHTTCCC-CSHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHhccC-CCcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 778887644332 2333322 33 123333333455 4788888888887765443 35688999999999999
Q ss_pred HHHHhcC
Q 018964 258 FVCEALP 264 (348)
Q Consensus 258 ~~~~~~~ 264 (348)
|-+..+.
T Consensus 235 Fwd~a~~ 241 (263)
T 2qcx_A 235 FWGMAYR 241 (263)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9887763
No 48
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=48.57 E-value=32 Score=26.85 Aligned_cols=56 Identities=14% Similarity=0.123 Sum_probs=40.7
Q ss_pred HHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 018964 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQFV 259 (348)
Q Consensus 200 ~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~~ 259 (348)
.|+..--=...-++|.-|.+||-.|....+.++. .. +++.-.+.+..|+.-|.+=+
T Consensus 53 qLA~~AP~ee~k~iI~eIr~DE~rH~~~F~~lY~---TG-~p~sY~eGL~~A~~~Eqeav 108 (115)
T 2hz8_A 53 EAAEKARNPEKRQVIDKILEDEEKHIEWLKAASK---QG-NAEQFASLVQQILQDEQRHV 108 (115)
T ss_dssp HHHHSCCCTTTTTTHHHHHHHHHHHHHHHHHHHH---SS-CCTTHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hC-ChHhHHHHHHHHHHHHHHHH
Confidence 3443332245678899999999999999999988 22 45667778888888877644
No 49
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=46.78 E-value=79 Score=25.36 Aligned_cols=92 Identities=16% Similarity=-0.001 Sum_probs=0.0
Q ss_pred hcCchHHHHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh---------
Q 018964 170 IHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH--------- 240 (348)
Q Consensus 170 ~~~~~~~~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~--------- 240 (348)
+.++......|-.-...|-...+--++.-.++...| ++|++..+...+.+|..|..-....+..+--.|.
T Consensus 1 Mk~~~kvi~~LN~~l~~El~A~~~Y~~~a~~~~~~g-~~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~~ 79 (159)
T 4am5_A 1 MKGDQKVIEYLNRGLRSELTAVSQYWLHYRMLEDWG-YKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLRI 79 (159)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccccccccc
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 018964 241 WQKVHHMVHEAVEIETQFVCEA 262 (348)
Q Consensus 241 ~~~i~~l~~eav~~E~~~~~~~ 262 (348)
.+.+.+++..+.+.|..++...
T Consensus 80 ~~~~~e~l~~~l~~E~~~~~~~ 101 (159)
T 4am5_A 80 GQTVKEVLESDLAAEREARALY 101 (159)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHH
No 50
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=46.26 E-value=93 Score=24.65 Aligned_cols=92 Identities=15% Similarity=0.047 Sum_probs=0.0
Q ss_pred hcCchHHHHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhH--------
Q 018964 170 IHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW-------- 241 (348)
Q Consensus 170 ~~~~~~~~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~-------- 241 (348)
+..+......+-.....|-...+--+..-.++...| +++++..+..+..+|..|..-....++.+-..|.-
T Consensus 3 m~~~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~-~~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~~~~~ 81 (161)
T 3uoi_A 3 MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWG-FTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI 81 (161)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCCCCC
Q ss_pred -HHHHHHHHHHHHHHHHHHHHh
Q 018964 242 -QKVHHMVHEAVEIETQFVCEA 262 (348)
Q Consensus 242 -~~i~~l~~eav~~E~~~~~~~ 262 (348)
..+.++++.+++.|...+...
T Consensus 82 ~~~~~e~l~~~l~~E~~~~~~~ 103 (161)
T 3uoi_A 82 GQTLREQFEADLAIEYDVLNRL 103 (161)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
No 51
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=45.63 E-value=1.3e+02 Score=26.97 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=50.5
Q ss_pred hcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Q 018964 54 QASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133 (348)
Q Consensus 54 ~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs 133 (348)
..+-|++.-|..+.|+.. -+...++ ++. ..+..-.+++..+.+|.++..+.+-+..|.+|...|.
T Consensus 122 ~G~pWt~~yv~~~Gdl~a----------DL~~nia----aE~-~Ar~~Y~rl~~~tdDp~vkd~L~fLi~RE~~H~~~f~ 186 (266)
T 1o9i_A 122 NGAAWNAGYVTSSGNLVA----------DMRFNVV----RES-EARLQVSRLYSMTEDEGVRDMLKFLLARETQHQLQFM 186 (266)
T ss_dssp TCCBCBGGGCCCCSCHHH----------HHHHHHH----HHH-HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccccccCCCHHH----------HHHHHHH----HHH-HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHH
Confidence 347899999988877652 1112221 111 1122224677888999999999999999999999999
Q ss_pred HHHHHh
Q 018964 134 LLLETY 139 (348)
Q Consensus 134 ~il~~~ 139 (348)
..++.+
T Consensus 187 ~aLe~l 192 (266)
T 1o9i_A 187 KAQEEL 192 (266)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999987
No 52
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=43.50 E-value=92 Score=26.19 Aligned_cols=60 Identities=12% Similarity=0.073 Sum_probs=41.5
Q ss_pred HHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhh-------h---HHHHHHHHHHHHHHHHHHHH
Q 018964 200 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL-------H---WQKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 200 ~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~-------~---~~~i~~l~~eav~~E~~~~~ 260 (348)
++...| ++|+++-+...+.+|.-|..-....++.+-..+ | ...+.++++.+.+.|+....
T Consensus 35 ~f~~~~-l~g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p~~~~~s~~e~le~aL~~Ek~v~~ 104 (189)
T 3uno_A 35 YFDSED-LPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTD 104 (189)
T ss_dssp HHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 456667 999999999999999999985554444332211 1 13466778888888876553
No 53
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=42.86 E-value=1.4e+02 Score=27.18 Aligned_cols=71 Identities=20% Similarity=0.266 Sum_probs=51.3
Q ss_pred hcCCcCccccCcccchHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Q 018964 54 QASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYS 133 (348)
Q Consensus 54 ~~~fW~peeid~s~D~~d~~~L~~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs 133 (348)
..+-|++.-|..+.|+.. -+...++ ++. ..+..-.+++..+.+|.++..+.+-+..|.+|...|.
T Consensus 129 ~G~pWta~Yv~~~Gdl~a----------DL~~Nia----AE~-~Ar~~Y~rL~~~tdDp~vkd~L~fLi~RE~~H~~~f~ 193 (302)
T 2v8t_A 129 MGEHWNGEYVFTSGNLIL----------DLLHNFF----LEV-AARTHKLRVYEMTDNPVAREMIGYLLVRGGVHAAAYG 193 (302)
T ss_dssp TSCBCBGGGCCCCSCHHH----------HHHHHHH----HHH-HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcchhcCCCCHHH----------HHHHHHH----HHH-HHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHH
Confidence 457899999988887652 1112221 111 1122224677888999999999999999999999999
Q ss_pred HHHHHh
Q 018964 134 LLLETY 139 (348)
Q Consensus 134 ~il~~~ 139 (348)
..++.+
T Consensus 194 ~ALe~l 199 (302)
T 2v8t_A 194 KALESL 199 (302)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999998
No 54
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=42.29 E-value=1.4e+02 Score=24.24 Aligned_cols=107 Identities=12% Similarity=-0.035 Sum_probs=63.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhHH
Q 018964 110 QIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVEGI 189 (348)
Q Consensus 110 ~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~~lEgi 189 (348)
.-+....++..++..|..|++.+...+..++..|. ...+.. ...+.+....+-...-.|.
T Consensus 41 ~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~-----~~~~~~--------------~~~~~~~~e~l~~al~~E~- 100 (179)
T 1nfv_A 41 DYGELAANMKLIAIDEMRHAENFAERIKELGGEPT-----TQKEGK--------------VVTGQAVPVIYESDADQED- 100 (179)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CCCSSC--------------CCCSCCHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCc-----CCCCCc--------------CCCCCCHHHHHHHHHHHHH-
Confidence 34888999999999999999999999888865542 110100 0000111111111111222
Q ss_pred HHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018964 190 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236 (348)
Q Consensus 190 ~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~ 236 (348)
.....+--+..++....-+.++..+..+..||..|......++..+.
T Consensus 101 ~~~~~y~~l~~~a~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~l~ 147 (179)
T 1nfv_A 101 ATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIK 147 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222333444444689999999999999999988877776554
No 55
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A
Probab=40.13 E-value=1.1e+02 Score=25.34 Aligned_cols=59 Identities=12% Similarity=0.025 Sum_probs=43.1
Q ss_pred HHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhh--------hH--HHHHHHHHHHHHHHHHHHH
Q 018964 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL--------HW--QKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 201 l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~--------~~--~~i~~l~~eav~~E~~~~~ 260 (348)
+...| +++++..++....+|.-|..-....++.+-..+ +. ..+.++++.+++.|...+.
T Consensus 36 ~~~~g-f~~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~~~~~~~~~e~l~~~l~~E~~~~~ 104 (189)
T 3oj5_A 36 FDSED-LPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTD 104 (189)
T ss_dssp HHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HccCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 35566 999999999999999999997776666553221 11 2467788888888877554
No 56
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=39.85 E-value=2e+02 Score=25.70 Aligned_cols=120 Identities=13% Similarity=0.008 Sum_probs=68.3
Q ss_pred CChHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHhhcHHHHHHH------HHHH-------------
Q 018964 109 IQIPEA-RAFYGFQIAMENIHSEMYSLLLETYIKD-SKEKHRLFNAIENIPCVAQKA------KWAL------------- 167 (348)
Q Consensus 109 ~~~~E~-~~~~~~q~~~E~iH~esYs~il~~~~~d-~~e~~~~~~~~~~~p~l~~k~------~~i~------------- 167 (348)
++.++. +..+.-.+.+|--|.|..+.++..+..+ +.+..+ ...+|.+.+-. .++.
T Consensus 49 ~~~~~~y~dLL~dIatEEl~HlEmva~~I~~L~~ga~~~~~~----a~~~p~~~~~~~g~n~~~~~~~g~g~~p~ds~G~ 124 (266)
T 1o9i_A 49 STGAEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPED----LKRDPSLATTMAGMDPEHSLVHGLNASLNNPNGA 124 (266)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHH----HHHCTTHHHHHHHSCHHHHHTTSSCCCSBCTTCC
T ss_pred CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCcchhh----cccchhhHhhhcCCChHHHHhcCCCCCccCCCCC
Confidence 345688 8888888899999999999999999643 211211 11233331111 0221
Q ss_pred ----HHhcCchHHHHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018964 168 ----DWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236 (348)
Q Consensus 168 ----~~~~~~~~~~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~ 236 (348)
.++....+...-+......|.-. -.-+.-+ -+.-.=|++.+++.+|..||..|..-....+..+.
T Consensus 125 pWt~~yv~~~Gdl~aDL~~niaaE~~A-r~~Y~rl---~~~tdDp~vkd~L~fLi~RE~~H~~~f~~aLe~l~ 193 (266)
T 1o9i_A 125 AWNAGYVTSSGNLVADMRFNVVRESEA-RLQVSRL---YSMTEDEGVRDMLKFLLARETQHQLQFMKAQEELE 193 (266)
T ss_dssp BCBGGGCCCCSCHHHHHHHHHHHHHHH-HHHHHHH---HTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccccCCCHHHHHHHHHHHHHHH-HHHHHHH---HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111112333333334455321 1112222 22222489999999999999999998777766663
No 57
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=38.23 E-value=1.5e+02 Score=23.64 Aligned_cols=105 Identities=12% Similarity=0.034 Sum_probs=61.8
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 018964 104 RFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGF 183 (348)
Q Consensus 104 ~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~ 183 (348)
..+..-.-|++..++..++..|..|++-+-.+|..+ .+|.. ..| +.+. .+.|-.-
T Consensus 36 ~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~~-~~p~~---------~~~------------~~~T---~enL~~A 90 (144)
T 4di0_A 36 SKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAV-GDPAT---------GLP------------FGTS---RQNLQSA 90 (144)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCTTT---------SCC------------CSSH---HHHHHHH
T ss_pred HHHHHCChHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccc---------CCC------------CCcH---HHHHHHH
Confidence 344444568899999999999999999887777654 24410 001 1110 1111111
Q ss_pred HHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHH
Q 018964 184 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 233 (348)
Q Consensus 184 ~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~ 233 (348)
..-|.--....|..+.-.++.--.+.++..+..|.+||..|......++.
T Consensus 91 ~~GE~~e~~~~Y~~~a~~A~~eG~~~ia~~f~~~a~~E~~Ha~~~~~~l~ 140 (144)
T 4di0_A 91 IAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALD 140 (144)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11222211112222223344444899999999999999999997776654
No 58
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=37.35 E-value=1.6e+02 Score=23.74 Aligned_cols=55 Identities=11% Similarity=0.126 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018964 84 SHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETY 139 (348)
Q Consensus 84 ~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~ 139 (348)
..+|..-..++.-.. ..-..++..+++++++..+...+..|..|.+.+..+++.+
T Consensus 107 ~~~L~~ai~~E~~a~-~~Y~~~a~~~~d~~~r~l~~~ia~eE~~H~~~l~~~l~~l 161 (175)
T 2fzf_A 107 IDLIRWAMKAEEIAA-EFYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELL 161 (175)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHTSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444432 2334577778899999999999999999999999998876
No 59
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=36.27 E-value=1.6e+02 Score=23.18 Aligned_cols=105 Identities=14% Similarity=0.102 Sum_probs=65.3
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 018964 107 NDIQIPEARAFYGFQIAMENIHSEMYSLLLET--YIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFA 184 (348)
Q Consensus 107 ~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~--~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~ 184 (348)
..-.-+.+..++-.|+..|..|+..+-..+.. ++ .|. . ..| +.+....++. -.
T Consensus 35 ~~~g~~~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg-~p~--------~-~~p------------~~~~~e~L~~---al 89 (144)
T 1j30_A 35 DEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLT-DPA--------T-DKP------------IGTLEQMIES---AI 89 (144)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCB-CTT--------T-SCB------------CSSHHHHHHH---HH
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC-CCC--------c-CCC------------CccHHHHHHH---HH
Confidence 33455888899999999999999988777765 53 331 0 112 1111111111 01
Q ss_pred HhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018964 185 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236 (348)
Q Consensus 185 ~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~ 236 (348)
-.|.--....+.-+...++....+.+...++.|..||..|......++..+.
T Consensus 90 ~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~i~~~E~~H~~~~~~~l~~i~ 141 (144)
T 1j30_A 90 AGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQLK 141 (144)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222222233334445566667899999999999999999998888776654
No 60
>3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV}
Probab=36.24 E-value=2.3e+02 Score=25.12 Aligned_cols=201 Identities=13% Similarity=0.015 Sum_probs=109.8
Q ss_pred hHHHHHHHHHhcCCcCc-cccCcccchHHHh--cCCHHHHHHHHHH-HHHHHHHHHHHHhhHHHHHHhcCC------hHH
Q 018964 44 KQVWEMYKKAQASFWTA-EEVDLSQDVQHWE--RLLDSEKHFISHV-LAFFAASDGIVLENLAARFLNDIQ------IPE 113 (348)
Q Consensus 44 ~~~~~lykk~~~~fW~p-eeid~s~D~~d~~--~L~~~er~~~~~~-la~l~~~d~~v~~~l~~~~~~~~~------~~E 113 (348)
+|..+|++.... .|.. -+-|+ +..|. +|+.+--..|..- .-++..- .+.+.. .....+ ..+
T Consensus 20 ~~se~L~~~~~~-iw~~i~~HPF---v~~L~dGtL~~e~Fr~Yl~QDy~YL~~f----ar~~Al-~~aKa~~~~~~~~~~ 90 (262)
T 3oql_A 20 AWAQQLINDCSP-AKARVVEHEL---YQQMRDAKLSPQIMRQYLIGGWPVVEQF----AVYMAK-NLTKTRFGRHPGEDM 90 (262)
T ss_dssp HHHHHHHHHHHH-HHHHHHTCHH---HHHHHTTCSCHHHHHHHHHHHHHHHHHH----HHHHHH-HHTTCCTTSCHHHHH
T ss_pred HHHHHHHHHhHH-HHHHHHCChH---HHHHHcCCCCHHHHHHHHHHhHHHHHHH----HHHHHH-HHHhCccccCCChHH
Confidence 666677765444 5544 33344 33453 6886654433331 1222221 122222 222222 336
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHH-HHhhHHHHH
Q 018964 114 ARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGF-ACVEGIFFS 192 (348)
Q Consensus 114 ~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~-~~lEgi~f~ 192 (348)
++.++...+..|..|.+.+..+.+.++.++++ ......-|.-..-..++.+.... .++...+.|. +.+|+.---
T Consensus 91 ~~~~l~~~i~vE~~H~~~~~~f~~~~Gis~ee----l~~~~~~P~~~aYt~~ml~~a~~-g~l~e~lAAl~ya~e~~ig~ 165 (262)
T 3oql_A 91 ARRWLMRNIRVELNHADYWVNWCAAHDVTLED----LHDQRVAPELHALSHWCWQTSSS-DSLAVAMAATNYAIEGATGE 165 (262)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHTTTCCHHH----HHHTCSCGGGGHHHHHHHHHHHH-SCHHHHHHHTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHcCCCHHH----HhcCCCChHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHhhh
Confidence 77788777778888999999999988777653 23344456655556666654322 2355666665 455554221
Q ss_pred hHHHHHHHHHhcCC----CCchH---HHHHHH---HhhhhhhHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHH
Q 018964 193 GSFCAIFWLKKRGL----MPGLT---FSNELI---SRDEGLHCDFACLLYSLLRKRL----HWQKVHHMVHEAVEIETQF 258 (348)
Q Consensus 193 s~F~~~~~l~~~g~----l~g~~---~~i~~I---~rDE~~H~~f~~~l~~~l~~e~----~~~~i~~l~~eav~~E~~~ 258 (348)
-+ .-...|+ .++.. ...+|| ..=...|..-...++..|.... ..+++.+.+..+.+.|..|
T Consensus 166 ~s-----~~~~~g~~~~~~~~~~~~~~~~~w~~~h~~~D~~H~~e~~~li~~l~~~~~~~~e~~~~~~a~~~S~~~~~~f 240 (262)
T 3oql_A 166 WS-----AVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDDAHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLF 240 (262)
T ss_dssp HH-----HHHHSSSHHHHTSCHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-----HHhhhhHHHhcCCCcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011222 11110 122222 2223479999999998887432 3467888999999999999
Q ss_pred HHHhc
Q 018964 259 VCEAL 263 (348)
Q Consensus 259 ~~~~~ 263 (348)
.+.++
T Consensus 241 ld~~y 245 (262)
T 3oql_A 241 LERCI 245 (262)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98766
No 61
>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A
Probab=35.64 E-value=1.6e+02 Score=24.04 Aligned_cols=61 Identities=13% Similarity=0.094 Sum_probs=42.3
Q ss_pred HHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHh--------hhh----HHHHHHHHHHHHHHHHHHHH
Q 018964 199 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRK--------RLH----WQKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 199 ~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~--------e~~----~~~i~~l~~eav~~E~~~~~ 260 (348)
+++.+.| +||+++-+..-+.+|.-|..-....++..-. +|+ ...+.+++..+.+.|+....
T Consensus 28 ~~f~~~~-l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~~~~~~e~le~aL~~Ek~v~~ 100 (168)
T 3e6s_A 28 IWFDQND-WEGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCAEWSSPEDVWQSILELEQANTR 100 (168)
T ss_dssp HHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGGTCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHCcCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCCccccCCCHHHHHHHHHHHHHHHHH
Confidence 3566777 8999999999999999999854444333211 121 12366788888888887554
No 62
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=33.38 E-value=1.4e+02 Score=25.27 Aligned_cols=59 Identities=8% Similarity=-0.054 Sum_probs=41.8
Q ss_pred HHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh--------HHHHHHHHHHHHHHH-HHHH
Q 018964 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH--------WQKVHHMVHEAVEIE-TQFV 259 (348)
Q Consensus 201 l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~--------~~~i~~l~~eav~~E-~~~~ 259 (348)
.++.--+++++..++.++.+|..|......++..+...+. ...+.+.++.+++.| .+|.
T Consensus 53 ~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i~~~p~~~~gst~enL~~a~~gE~~E~t 120 (202)
T 1yuz_A 53 AAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPSAYSCDLNLISGANGEIYETS 120 (202)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCC--CCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCccCCCCHHHHHHHHHHhHHHHHH
Confidence 3555568999999999999999999877777665422111 124667778888888 5554
No 63
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=32.72 E-value=1.8e+02 Score=22.89 Aligned_cols=58 Identities=12% Similarity=-0.000 Sum_probs=43.0
Q ss_pred hcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHHHHH
Q 018964 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH---------WQKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 203 ~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~---------~~~i~~l~~eav~~E~~~~~ 260 (348)
+..-+++++..+..+..+|..|..-....+..+-..|. ...+.+++..+++.|...+.
T Consensus 33 ~~~~~~~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~~~~~~~~~~~e~l~~~l~~E~~~~~ 99 (161)
T 3gvy_A 33 EDWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLRIGQTLRETLDADLAAEHDART 99 (161)
T ss_dssp HHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 44568999999999999999999977777666643322 13467788888888877654
No 64
>3hl1_A Ferritin like protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Caulobacter vibrioides}
Probab=32.01 E-value=90 Score=28.75 Aligned_cols=40 Identities=10% Similarity=-0.004 Sum_probs=31.4
Q ss_pred HHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhh
Q 018964 197 AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKR 238 (348)
Q Consensus 197 ~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e 238 (348)
..|++...+ ......|+-|.++|.+|....+++++.+--.
T Consensus 32 a~ySi~~~n--~~~~~~i~~V~~eEMlHl~l~aNll~AiGg~ 71 (317)
T 3hl1_A 32 VLYSIKDPT--TVPYRLIQAAVYQEMLHAQLVSNIANAYGYS 71 (317)
T ss_dssp HHHHBSCTT--SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHhcCCCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 344454443 5788999999999999999999999887543
No 65
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=29.73 E-value=2.1e+02 Score=23.25 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=42.5
Q ss_pred HHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhh--------hH--HHHHHHHHHHHHHHHHHHH
Q 018964 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL--------HW--QKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 201 l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~--------~~--~~i~~l~~eav~~E~~~~~ 260 (348)
+...| ++|++..++..+.+|.-|..-...-++.+-..+ +. ..+.++++.+++.|...+.
T Consensus 45 ~~~~~-~~~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~~~~~~~~e~le~~l~~E~~v~~ 113 (176)
T 1vlg_A 45 FDAEG-FKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPSNWNGIKDAFEAALKHEEFVTQ 113 (176)
T ss_dssp HHHHT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HccCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 34444 899999999999999999997666655543222 11 3477888888888887664
No 66
>3bvf_A Ferritin; iron storage, metal-binding, oxidoreductase; 1.50A {Helicobacter pylori} PDB: 3bve_A 3bvi_A 3bvk_A 3bvl_A 3egm_A
Probab=28.73 E-value=2.2e+02 Score=23.39 Aligned_cols=57 Identities=11% Similarity=0.014 Sum_probs=41.8
Q ss_pred cCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhh--------hH--HHHHHHHHHHHHHHHHHHH
Q 018964 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL--------HW--QKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 204 ~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~--------~~--~~i~~l~~eav~~E~~~~~ 260 (348)
+--+||++..+...+.+|.-|..-....+..+-..+ .. ..+.++++.+++.|+..+.
T Consensus 47 ~~gl~~~a~~f~~~a~EE~~HA~~l~e~i~~lGG~p~l~~i~~p~~~~~~~~e~le~aL~~E~~~~~ 113 (181)
T 3bvf_A 47 THSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISE 113 (181)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 445899999999999999999986666555443222 11 3477888888888887664
No 67
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=28.27 E-value=2.3e+02 Score=22.64 Aligned_cols=92 Identities=15% Similarity=0.047 Sum_probs=0.0
Q ss_pred hcCchHHHHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhH--------
Q 018964 170 IHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW-------- 241 (348)
Q Consensus 170 ~~~~~~~~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~-------- 241 (348)
+.........+-.....|-...+--...-.++...| +|+++..+..+..+|..|..-....+..+-..+.-
T Consensus 3 m~~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~-~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~~ 81 (174)
T 3qb9_A 3 MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWG-FTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI 81 (174)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCCC
Q ss_pred -HHHHHHHHHHHHHHHHHHHHh
Q 018964 242 -QKVHHMVHEAVEIETQFVCEA 262 (348)
Q Consensus 242 -~~i~~l~~eav~~E~~~~~~~ 262 (348)
..+.++++.+++.|...+...
T Consensus 82 ~~~~~e~l~~al~~E~~~~~~y 103 (174)
T 3qb9_A 82 GQTLREQFEADLAIEYDVLNRL 103 (174)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
No 68
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=27.28 E-value=2.3e+02 Score=23.10 Aligned_cols=89 Identities=17% Similarity=0.017 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhH---------HH
Q 018964 173 SDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLHW---------QK 243 (348)
Q Consensus 173 ~~~~~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~~---------~~ 243 (348)
+......|-.....|-...+--+..-.++...| +++++..+..+..+|..|..-....++.+-..|.- ..
T Consensus 25 ~~~~~~~LN~~la~E~~a~~~Y~~~a~~~~~~~-~~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~~~~~ 103 (182)
T 3fvb_A 25 EPKVIERLNEALFLELGAVNQYWLHYRLLNDWG-YTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLRIGQN 103 (182)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCC
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 018964 244 VHHMVHEAVEIETQFVCEA 262 (348)
Q Consensus 244 i~~l~~eav~~E~~~~~~~ 262 (348)
+.+++..+++.|...+...
T Consensus 104 ~~e~l~~~l~~E~~~~~~y 122 (182)
T 3fvb_A 104 VKEVLEADLKGEYDARASY 122 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
No 69
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=26.33 E-value=97 Score=25.18 Aligned_cols=57 Identities=18% Similarity=-0.002 Sum_probs=42.1
Q ss_pred cCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHHHHH
Q 018964 204 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH---------WQKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 204 ~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~---------~~~i~~l~~eav~~E~~~~~ 260 (348)
..-+|+++..+..+..+|..|..-....+..+-..+. ...+.++++.+++.|...+.
T Consensus 39 ~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~~~~~e~l~~al~~E~~~~~ 104 (179)
T 1nfv_A 39 DMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIE 104 (179)
T ss_dssp HTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCCSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCCcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3457999999999999999999977777665533221 12467888888888886654
No 70
>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A*
Probab=26.04 E-value=3e+02 Score=23.21 Aligned_cols=144 Identities=10% Similarity=-0.101 Sum_probs=85.8
Q ss_pred HHhcCChHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHH
Q 018964 105 FLNDIQIPEARAFYGFQIAM----ENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERL 180 (348)
Q Consensus 105 ~~~~~~~~E~~~~~~~q~~~----E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~l 180 (348)
.....++++...++..++.. |.-+ +..+++.++.++++ .......|....-.+++.....+. ++...+
T Consensus 66 ~~~ka~~~~~~~~l~~~~~~~i~~E~~l---h~~~~~~~Gi~~~~----~~~~~~~p~t~aY~~~l~~~a~~~-~~~~~l 137 (221)
T 2gm8_A 66 AASRAPSVDLMKTALELAYGTVTGEMAN---YEALLKEVGLSLRD----AAEAEPNRVNVSYMAYLKSTCALE-GFYQCM 137 (221)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHHHTHHHH---HHHHHHHTTCCHHH----HHHSCCCHHHHHHHHHHHHHHHHS-CHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHcCCCHHH----HhhCCCChHHHHHHHHHHHHHhcC-CHHHHH
Confidence 34456777777766654432 5432 23345777766653 334555677777777777655432 467777
Q ss_pred HHHHHhhHHHHHhHHHHHHHHHhcCC-CCchHHHHHHHH---hhh-hhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 018964 181 VGFACVEGIFFSGSFCAIFWLKKRGL-MPGLTFSNELIS---RDE-GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIE 255 (348)
Q Consensus 181 v~~~~lEgi~f~s~F~~~~~l~~~g~-l~g~~~~i~~I~---rDE-~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E 255 (348)
+++..+|.++...|- .+..... .|+ .---+||. -+| .-|+.....++..+ +...+++.+++..+.+.|
T Consensus 138 aAl~pc~~~Y~~ig~----~l~~~~~~~~~-~~y~~Wi~~y~~~~f~~~v~~~~~lld~~--~~~~~~~~~~f~~a~~lE 210 (221)
T 2gm8_A 138 AALLPCFWSYAEIAE----RHGGKLRENPV-HVYKKWASVYLSPEYRGLVERLRAVLDSS--GLSAEELWPYFKEASLYE 210 (221)
T ss_dssp HHHHHHHHHHHHHHH----HHGGGGGGCCC-HHHHHHHHHHHSHHHHHHHHHHHHHHHTS--SCCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHH----HHHhccCCCCC-chHHHHHHHhCCHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHH
Confidence 777778887654332 2222211 133 22234443 344 45666666666555 233568999999999999
Q ss_pred HHHHHHhc
Q 018964 256 TQFVCEAL 263 (348)
Q Consensus 256 ~~~~~~~~ 263 (348)
..|-+..+
T Consensus 211 ~~Fwd~a~ 218 (221)
T 2gm8_A 211 LEFWQAAY 218 (221)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987654
No 71
>3ez0_A Uncharacterized protein with ferritin-like fold; YP_832262.1, protein of unknown function with ferritin-like structural genomics; HET: UNL TLA; 2.33A {Arthrobacter SP}
Probab=25.26 E-value=3.4e+02 Score=23.59 Aligned_cols=198 Identities=14% Similarity=0.054 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 018964 77 DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENI 156 (348)
Q Consensus 77 ~~er~~~~~~la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~ 156 (348)
+.....+..+|+.++.++......+.. =+...|+-..|.-++..+..|.-|-+.-...+...+.|+.+-.+-|....
T Consensus 10 ~~~~~~v~~llg~lAygel~AF~RLa~-da~~AP~L~~r~ala~mAaae~~hf~~L~~~l~~~G~D~~~am~pf~~~l-- 86 (225)
T 3ez0_A 10 ARYNRFVADLFGMMAYGELSAFERFSA-DARYSPTLHDRAVLGRIAVVEFRHYELVSARLEAMGIDAEDAMLPFQAAV-- 86 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCSSSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGHHHH--
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHH-HHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH--
Confidence 344556778888888888666666653 34566777778889999999999999988889888888854222221110
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018964 157 PCVAQKAKWALDWIHSSDSFAERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236 (348)
Q Consensus 157 p~l~~k~~~i~~~~~~~~~~~~~lv~~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~ 236 (348)
... .....|.++.++++--++.-|+.- =|+- --..++-|.+...+.-+.. +.-|..|...-++...
T Consensus 87 d~f--------h~~T~P~dW~E~LvKaYVgdgla~--DFy~---~ia~~L~~~~r~~v~~vL~-~~~~~~f~v~~vraai 152 (225)
T 3ez0_A 87 DYF--------HSRTRPADWYESLMKAYVIDTVSA--DFYR---AISRYVDAGTRDVIEQIQA-SDETTEVLRERLRSAL 152 (225)
T ss_dssp HHH--------HHTCCCSSHHHHHHHHHHHHHHHH--HHHH---HHTTTSCHHHHHHHHHHSC-CHHHHHHHHHHHHHHH
T ss_pred HHH--------HhcCCCCChHHHHHHHHHHhhHHH--HHHH---HHHhhCCHHHHHHHHHHhc-cccchHHHHHHHHHHH
Confidence 000 011246678888887777666631 1221 1234555677887888776 5569999988877666
Q ss_pred hhhhH--H----HHHHHHHHHHHHHHHHHH------HhcCCCCCCCCH-----HHHHHHHHHHHHHHHHHcCCC
Q 018964 237 KRLHW--Q----KVHHMVHEAVEIETQFVC------EALPCALIGMNS-----SLMSQYIKFVADRLLVALGCQ 293 (348)
Q Consensus 237 ~e~~~--~----~i~~l~~eav~~E~~~~~------~~~~~~~~Gl~~-----~~~~~yi~y~an~~L~~lG~~ 293 (348)
...|. . .-+.++.|++-+-...+. .++++. ++.. ..+...+.-...+|+..||+.
T Consensus 153 ~aDp~l~sRLaLWgRRLvGEAL~qaQ~vla~~~~L~~l~~g~--dl~~~~~~v~~lf~~l~~~H~~RM~~LGL~ 224 (225)
T 3ez0_A 153 ADDPRLASRLALWGRRLLGEALTQAQRVSYEHAFLGSLIGGE--DSAAAKELVSGLIAGLAEKHSKRMTQLGLT 224 (225)
T ss_dssp HHCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred hcCchhhhHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcCC--CcchhhhhHHHHHHHHHHHHHHHHHHcCCC
Confidence 54332 1 134566666554333221 112111 3333 567777888889999999985
No 72
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=24.33 E-value=2.9e+02 Score=22.47 Aligned_cols=59 Identities=12% Similarity=-0.030 Sum_probs=40.1
Q ss_pred HHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhh--------hH--HHHHHHHHHHHHHHHHHHH
Q 018964 201 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRL--------HW--QKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 201 l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~--------~~--~~i~~l~~eav~~E~~~~~ 260 (348)
+... -+||+++-++..+.+|.-|..-....+..+-..+ .. ..+.+++..+.+.|+.-+.
T Consensus 33 ~~~~-~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p~~~~~~~~e~le~aL~~E~~v~~ 101 (173)
T 1s3q_A 33 FDSI-GLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSEWDSPLAAFEHVYEHEVNVTK 101 (173)
T ss_dssp HHHT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HhHc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 3444 4899999999999999999986555544433222 11 3467777777777776553
No 73
>2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2}
Probab=22.49 E-value=3.4e+02 Score=22.63 Aligned_cols=136 Identities=7% Similarity=-0.082 Sum_probs=84.7
Q ss_pred hcCChHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHH
Q 018964 107 NDIQIPEARAFYGFQIA----MENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVG 182 (348)
Q Consensus 107 ~~~~~~E~~~~~~~q~~----~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~ 182 (348)
... +++....+..++. .|.-|-+ .+++.++.++++ .......|....-.+++.....+ ++...+++
T Consensus 64 ~ka-~~~~~~~~~~~~~~~i~~E~~~h~---~~~~~~Gi~~~~----~~~~~~~p~t~aY~~~l~~~a~~--~~~~~~aA 133 (214)
T 2qzc_A 64 SKG-PIDKVTKILNLVFSSRDKGLETHG---KLYSKLDISRDV----IVKTGYNLINYAYTRHLYYYANL--DWNKFLVA 133 (214)
T ss_dssp TTS-CHHHHHHHHHHHTCC--CHHHHHH---HHHHHTTCCHHH----HHHSCCCHHHHHHHHHHHHHHHH--CHHHHHHH
T ss_pred HhC-CHHHHHHHHHHHHHHHHHHHHHHH---HHHHHcCCCHHH----HhhCCCChHHHHHHHHHHHHHhc--CHHHHHHH
Confidence 344 7777666665533 3643333 335777666653 33455567777777777776544 57778888
Q ss_pred HHHhhHHHHHhHHHHHHHHHhcCCCCchHHHHHHHH---hhh-hhhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 018964 183 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS---RDE-GLHCDFACLLYSLLRKRLHWQKVHHMVHEAVEIETQF 258 (348)
Q Consensus 183 ~~~lEgi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~---rDE-~~H~~f~~~l~~~l~~e~~~~~i~~l~~eav~~E~~~ 258 (348)
+..+|.++...| -.+... |+ .---+||. -+| .-|+.....+++.+ ....+ +.+++..+.+.|..|
T Consensus 134 l~pc~~~Y~~ig----~~l~~~---~~-~~y~~Wi~~y~~~~f~~~v~~~~~lld~~--~~~~~-~~~~f~~a~~~E~~F 202 (214)
T 2qzc_A 134 WTPCMFGYSIVG----DYVIDS---PN-EVYKTWASFYASTEYKKRIEAILYALDEV--SITED-LLNIFINSVRFEIGF 202 (214)
T ss_dssp HHHHHHHHHHHH----HHHTTC---SC-HHHHHHHHHHHSHHHHHHHHHHHHHHTTS--CCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHhC---CC-ChHHHHHHHhCCHHHHHHHHHHHHHHHhC--ccHHH-HHHHHHHHHHHHHHH
Confidence 877888765544 122222 44 22235553 344 46777777766555 22346 999999999999999
Q ss_pred HHHhc
Q 018964 259 VCEAL 263 (348)
Q Consensus 259 ~~~~~ 263 (348)
-+..+
T Consensus 203 wd~a~ 207 (214)
T 2qzc_A 203 WDASL 207 (214)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87766
No 74
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=22.43 E-value=2.7e+02 Score=21.52 Aligned_cols=58 Identities=19% Similarity=-0.002 Sum_probs=42.4
Q ss_pred hcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHHHHH
Q 018964 203 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKRLH---------WQKVHHMVHEAVEIETQFVC 260 (348)
Q Consensus 203 ~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~~e~~---------~~~i~~l~~eav~~E~~~~~ 260 (348)
...-+++++..+..+..+|..|..-....++.+-..|+ ...+.++++.+++.|...+.
T Consensus 33 ~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~~~~~e~l~~~l~~E~~~~~ 99 (158)
T 2y3q_A 33 KNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAK 99 (158)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 34457899999999999999999977777666543221 13466788888888877554
No 75
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=20.95 E-value=3.9e+02 Score=22.85 Aligned_cols=56 Identities=18% Similarity=0.264 Sum_probs=40.9
Q ss_pred HHHHHH-HHHHHHHHHHHHhhHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018964 81 HFISHV-LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYI 140 (348)
Q Consensus 81 ~~~~~~-la~l~~~d~~v~~~l~~~~~~~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~ 140 (348)
..+.++ ++.+.-+-|. +.+ ..++++++++ .+-||..-+..|+.|-..|=.+-+.++
T Consensus 111 ~l~D~Llv~AlIEARSC--ERF-~lLa~~l~d~-L~~FY~~Ll~SEArHy~~yl~LA~~y~ 167 (206)
T 2itb_A 111 KLVDTLVVGAFIEARSC--ERF-AALVPHLDEE-LGRFYHGLLKSEARHYQGYLKLAHNYG 167 (206)
T ss_dssp HHHHHHHHHHHHHHHHH--HHH-HHHGGGSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhH--HHH-HHHHhcCcHH-HHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 344443 3444443332 344 3588899988 999999999999999999999999886
No 76
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=20.72 E-value=3e+02 Score=21.29 Aligned_cols=109 Identities=10% Similarity=-0.098 Sum_probs=65.1
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcHHHHHHHHHHHHHhcCchHHHHHHHHHHHhh
Q 018964 108 DIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVAQKAKWALDWIHSSDSFAERLVGFACVE 187 (348)
Q Consensus 108 ~~~~~E~~~~~~~q~~~E~iH~esYs~il~~~~~d~~e~~~~~~~~~~~p~l~~k~~~i~~~~~~~~~~~~~lv~~~~lE 187 (348)
...-+....++-.++..|.-|++.....+..++..|.- ..+...+. -.+....++.. .-.|
T Consensus 34 ~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~-----~~~~~~~~-----------~~~~~e~l~~~---l~~E 94 (158)
T 2y3q_A 34 NWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNL-----QDLGKLNI-----------GEDVEEMLRSD---LALE 94 (158)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-----SCCCCCCC-----------CSSHHHHHHHH---HHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcC-----CCCCcCCC-----------CCCHHHHHHHH---HHHH
Confidence 34447888899999999999999999988888655521 10111000 00111111111 1122
Q ss_pred HHHHHhHHHHHHHHHhcCCCCchHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 018964 188 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 236 (348)
Q Consensus 188 gi~f~s~F~~~~~l~~~g~l~g~~~~i~~I~rDE~~H~~f~~~l~~~l~ 236 (348)
.- ....+--+...+....-+.++..+..+..||.-|......++..+.
T Consensus 95 ~~-~~~~y~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l~ 142 (158)
T 2y3q_A 95 LD-GAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQ 142 (158)
T ss_dssp HH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1122223333444445689999999999999999998888776654
Done!