BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018965
(348 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FYF9|FB76_ARATH F-box protein At1g67340 OS=Arabidopsis thaliana GN=At1g67340 PE=1
SV=1
Length = 379
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/328 (64%), Positives = 253/328 (77%), Gaps = 10/328 (3%)
Query: 18 DLFDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLSQAGPKALAVKA 77
DL D++PDDL+ +L KL S++ P+DFINVLLTCKRL + + P VLS+ PKA+AVKA
Sbjct: 42 DLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVKA 101
Query: 78 KNWSDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLA 137
NWS+ +HRFLKRCV AG+LEACYTLGMIRFYCLQNR +G SLMAKAA+ SHAPALYSLA
Sbjct: 102 HNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSLA 161
Query: 138 VIQFNGSGGGKNEKDLRAGVALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLI 197
VIQFNGSGG KN+KDLRAGVALCARAA +GHVDA+RELGHCLQDGYGV QN+ +GRR L+
Sbjct: 162 VIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFLV 221
Query: 198 EANAREFFQSVSKTRTRHQSYYFQLARATDAQIP-----CSPLLSDFGYNVEAPEVHPVN 252
+ANARE +V + + +S + L++ +P PLLSDFG NV APE HP N
Sbjct: 222 QANARE-LAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280
Query: 253 NFLKEWFESGVSDL-GNGLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKT 311
FL +WF D G+GLRLCS++GCGRPETR HE+RRCSVCG VNYCSRACQA+DWK
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340
Query: 312 RHKRECVPPLAPLINDGDADGLEGMVEI 339
RHK +C P+ + +G DG EG V+I
Sbjct: 341 RHKMDCA-PVQRWLEEG--DGGEGNVQI 365
>sp|Q9FK27|FB342_ARATH F-box protein At5g50450 OS=Arabidopsis thaliana GN=At5g50450 PE=2
SV=1
Length = 336
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/321 (61%), Positives = 238/321 (74%), Gaps = 20/321 (6%)
Query: 20 FDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLSQAGPKALAVKAKN 79
F+ L DDL+ +L KL +SA SPSDF+ VL TCKRLNR+GL P VLS+AG + LAV A+
Sbjct: 22 FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81
Query: 80 WSDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVI 139
WSDS+H+FLK CV AGN++A Y+LGMIRFYCLQN SG SLMAKAA+KSHAPALYSL+VI
Sbjct: 82 WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141
Query: 140 QFNGSGGGKNEKDLRAGVALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEA 199
QFNGSGG K +K+LRAGVALCAR+A +GHVDA+RELGHCLQDGYGV +++ +GRRLLI+A
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201
Query: 200 NAREFFQSVSKTRTRHQSYYFQLARATDAQIPCSPLLSDFGYNVEAPEVHPVNNFLKEWF 259
NARE S+ Y L + + L+D V E+HPVN FLKEWF
Sbjct: 202 NARELACSLRS--------YLSLKSGDENET-----LTDLSV-VPVQEIHPVNRFLKEWF 247
Query: 260 ESGVSDLGNGLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVP 319
SG DL GLR+CS+ GCGRPETR HE+RRCSVCGKVNYCSR CQA+DW+ +HK EC P
Sbjct: 248 SSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECTP 307
Query: 320 ------PLAPLINDGDADGLE 334
A + +DG+A +E
Sbjct: 308 LDLWVAAAAEIGDDGEAVAVE 328
>sp|Q2YDC9|PDCD2_BOVIN Programmed cell death protein 2 OS=Bos taurus GN=PDCD2 PE=2 SV=1
Length = 344
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 12/85 (14%)
Query: 234 PLLSDFGYNVEAPEVHPVNNFLKEWFESGVSDLGNGLRLCSYSGCGRPETRVHEYRRCSV 293
P +DF Y+ E P P + E ES L +G LC GC P +RCS
Sbjct: 101 PRQNDF-YSYEPPSEDPPS----ETGESVYLHLKSGAHLCRVCGCSGP-------KRCSR 148
Query: 294 CGKVNYCSRACQAIDWKTRHKRECV 318
C K +YCS+ Q++DW+ HK+ C
Sbjct: 149 CHKAHYCSKEHQSLDWRLGHKQACA 173
>sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana
GN=UBP15 PE=2 SV=2
Length = 924
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 19/30 (63%)
Query: 290 RCSVCGKVNYCSRACQAIDWKTRHKRECVP 319
RCS C V YCS CQ I W+ HK ECVP
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVP 169
>sp|Q9FXC7|FB79_ARATH Putative F-box protein At1g67623 OS=Arabidopsis thaliana
GN=At1g67623 PE=4 SV=1
Length = 296
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 20 FDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLSQAGPKALAVKAKN 79
D+LP+DLL + S + A S S N+ L K R+ V + K +
Sbjct: 24 LDSLPEDLLVEISS--CTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLKEIEFLP-- 79
Query: 80 WSDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVI 139
W +++ +F++RC + N EA + G I ++ + + G +A+AA K A Y VI
Sbjct: 80 WHENSAKFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKEAKYVYGVI 139
>sp|Q16342|PDCD2_HUMAN Programmed cell death protein 2 OS=Homo sapiens GN=PDCD2 PE=1 SV=2
Length = 344
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 260 ESGVSDLGNGLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVP 319
ES L +G LC GC P+T CS C K YCS+ Q +DW+ HK+ C
Sbjct: 122 ESVCLQLKSGAHLCRVCGCLGPKT-------CSRCHKAYYCSKEHQTLDWRLGHKQACAQ 174
Query: 320 P 320
P
Sbjct: 175 P 175
>sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana
GN=UBP19 PE=2 SV=2
Length = 672
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 276 SGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
S CG+ T+ +CS C V YCS ACQ DWK+ HK +C
Sbjct: 65 SVCGKATTK-----KCSRCKSVRYCSAACQTSDWKSGHKLKC 101
>sp|P47816|PDCD2_RAT Programmed cell death protein 2 OS=Rattus norvegicus GN=Pdcd2 PE=2
SV=2
Length = 343
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 14/66 (21%)
Query: 260 ESGVSD-------LGNGLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTR 312
E+G SD L +G LC GC P T CS C + +YCS+ Q +DW+
Sbjct: 114 ETGASDTECVCLQLKSGAHLCRVCGCLAPMT-------CSRCKQAHYCSKEHQTLDWQLG 166
Query: 313 HKRECV 318
HK+ C
Sbjct: 167 HKQACT 172
>sp|O94486|CHR2_SCHPO Chitin synthase regulatory factor 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chr2 PE=3 SV=1
Length = 512
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 129 HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIGHVDAVRELGHCLQDGYGVRQN 188
++ ALY LAV G+G + E + + L AA + HV A + CLQ G+GV QN
Sbjct: 223 YSEALYLLAVCY--GTGALRTEINEKEAYRLYKMAADLNHVQAAYRVAICLQMGFGVTQN 280
Query: 189 IEKGRRLLIEA 199
E+ A
Sbjct: 281 TEEAIHYFFRA 291
>sp|A1CBG9|MUB1_ASPCL MYND-type zinc finger protein samB OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=samB PE=3 SV=1
Length = 597
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
G+R C+Y CG+ E ++ +C C + YCS+ CQ W H+ C
Sbjct: 546 GIRQCAYYKCGKWEETARQFAKCRRCRRTKYCSKDCQKAAW-VYHRHWC 593
>sp|O94256|SET6_SCHPO SET domain and MYND-type zinc finger protein 6
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=set6 PE=4 SV=1
Length = 483
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 227 DAQIPCSPLLSDFGYNVEAPEVHPVNNFL-KEWFESGVSDLGNGLRLCSYSGCGRPETRV 285
DA + S +L +FG A + P+ + ++ + D N R CS C + +
Sbjct: 2 DAPLIASVILPEFGKGTVATDNIPIGKIIIRKRVDILSLDSANLTRTCS--TCTEEKVKT 59
Query: 286 HEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
+RC+ C ++YCS+ CQ DW HK EC
Sbjct: 60 ---QRCAACKIIHYCSKGCQKADWPF-HKLEC 87
>sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana
GN=UBP16 PE=2 SV=1
Length = 1008
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 290 RCSVCGKVNYCSRACQAIDWKTRHKRECVPPLAPLINDGD 329
RCS C V YCS CQ I W+ HK EC P A ++ D +
Sbjct: 84 RCSRCKAVRYCSGKCQIIHWRQGHKDECHP--ASIVYDSE 121
>sp|Q09415|SET14_CAEEL SET domain-containing protein 14 OS=Caenorhabditis elegans
GN=set-14 PE=4 SV=2
Length = 429
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 276 SGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
S C + T + E ++CS C ++ YCS+ CQ DWK HK EC
Sbjct: 24 SYCNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVEC 64
>sp|Q9FKP5|UBP17_ARATH Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana
GN=UBP17 PE=2 SV=1
Length = 731
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 290 RCSVCGKVNYCSRACQAIDWKTRHKRECVPP 320
RCS C V YCS CQ + W+ HK EC P
Sbjct: 67 RCSQCKSVRYCSSKCQILHWRRGHKEECRSP 97
>sp|B0Y1D1|MUB1_ASPFC MYND-type zinc finger protein samB OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=samB PE=3 SV=1
Length = 605
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
G+R C+Y CG+ E ++ +C C + YCS+ CQ W H+ C
Sbjct: 554 GIRQCAYYKCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAW-VYHRHWC 601
>sp|Q4WVI6|MUB1_ASPFU MYND-type zinc finger protein samB OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=samB
PE=3 SV=1
Length = 605
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
G+R C+Y CG+ E ++ +C C + YCS+ CQ W H+ C
Sbjct: 554 GIRQCAYYKCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAW-VYHRHWC 601
>sp|A1DDX0|MUB1_NEOFI MYND-type zinc finger protein samB OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=samB
PE=3 SV=1
Length = 606
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
G+R C+Y CG+ E ++ +C C + YCS+ CQ W H+ C
Sbjct: 555 GIRQCAYYKCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAW-VYHRHWC 602
>sp|P46718|PDCD2_MOUSE Programmed cell death protein 2 OS=Mus musculus GN=Pdcd2 PE=2 SV=2
Length = 343
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 266 LGNGLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECV 318
L +G LC GC P T CS C + +YCS+ Q +DW+ HK+ C
Sbjct: 127 LKSGAHLCRVCGCLAPMT-------CSRCKQAHYCSKEHQTLDWRLGHKQACT 172
>sp|Q0CW83|MUB1_ASPTN MYND-type zinc finger protein samB OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=samB PE=3 SV=1
Length = 603
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
G+R C+Y CG+ E ++ +C C + YCS+ CQ W H+ C
Sbjct: 552 GIRQCAYYKCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAW-VYHRHWC 599
>sp|A2RA63|MUB1_ASPNC MYND-type zinc finger protein samB OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=samB PE=3 SV=1
Length = 605
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
G+R C+Y CG+ E ++ +C C + YCS+ CQ W H+ C
Sbjct: 554 GIRQCAYYKCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAW-VYHRHWC 601
>sp|Q2U685|MUB1_ASPOR MYND-type zinc finger protein samB OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=samB PE=3 SV=1
Length = 605
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
G+R C+Y CG+ E ++ +C C + YCS+ CQ W H+ C
Sbjct: 554 GIRQCAYYKCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAW-VYHRHWC 601
>sp|B8NKS1|MUB1_ASPFN MYND-type zinc finger protein samB OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=samB PE=3 SV=1
Length = 605
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
G+R C+Y CG+ E ++ +C C + YCS+ CQ W H+ C
Sbjct: 554 GIRQCAYYKCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAW-VYHRHWC 601
>sp|Q80TS8|SE1L3_MOUSE Protein sel-1 homolog 3 OS=Mus musculus GN=Sel1l3 PE=2 SV=3
Length = 1137
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 11/118 (9%)
Query: 87 FLKRCVFAGNLEACYTLGMIRFYCLQ----NRSSGTSLMAKAAMKSHAPAL-YSLAVIQF 141
+LK GN A L + F+ Q N + AK A+++ PAL Y A++ F
Sbjct: 684 WLKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLF 743
Query: 142 NGSGGGKNEKDLRAGVALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEA 199
G G KN R + L +AAS G AV LG R+N K + ++A
Sbjct: 744 KGQGVKKNR---RLALELMKKAASKGLHQAVNGLGWYYHK---FRKNYAKAAKYWLKA 795
>sp|O42631|MUB1_EMENI MYND-type zinc finger protein samB OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=samB PE=3 SV=1
Length = 590
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPP 320
G+R C+ CG+ E ++ +C C + YCS+ CQ W H+ C P
Sbjct: 540 GIRQCANYKCGKWEEFTRQFAKCRRCRRTKYCSKDCQKAAW-LYHRHWCATP 590
>sp|Q1PEW8|FB127_ARATH F-box protein At2g35280 OS=Arabidopsis thaliana GN=At2g35280 PE=2
SV=1
Length = 163
Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 20 FDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLSQAGPKALAVKAKN 79
+ALP DLL +++K+ S D+ N +L+CK L VL AL VK
Sbjct: 11 LEALPQDLLREIVAKI--GVKSAEDYHNCILSCKELGASANDERVLKTLNL-ALLVKKPL 67
Query: 80 WSDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVI 139
+K+C+ N +A Y G+I ++ L + + AA A+Y A++
Sbjct: 68 SCRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCDVDLHHIGIAANGGQKEAIYMYAML 127
>sp|Q58EK5|TDRD1_DANRE Tudor domain-containing protein 1 OS=Danio rerio GN=tdrd1 PE=2 SV=2
Length = 1175
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 260 ESGVSDLGNGLRLCSYSGCGRPETRVHEYR-RCSVCGKVNYCSRACQAIDWKTRHKRECV 318
++ VS +G ++LC+Y H+ RC+ C K YCS ACQ DW H+ C
Sbjct: 70 QTAVSMMGQVVKLCNYCS--------HQGNLRCTRCKKTCYCSVACQTQDW-IAHRHVCK 120
Query: 319 PPLAPLIND 327
P + + ++
Sbjct: 121 PSIPEVTSE 129
>sp|Q68CR1|SE1L3_HUMAN Protein sel-1 homolog 3 OS=Homo sapiens GN=SEL1L3 PE=1 SV=2
Length = 1132
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 11/118 (9%)
Query: 87 FLKRCVFAGNLEACYTLGMIRFYCLQ----NRSSGTSLMAKAAMKSHAPAL-YSLAVIQF 141
+LK GN A L + F+ Q N + AK A+++ PAL Y A++ F
Sbjct: 679 WLKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLF 738
Query: 142 NGSGGGKNEKDLRAGVALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEA 199
G G KN R + L +AAS G AV LG ++N K + ++A
Sbjct: 739 KGQGVKKNR---RLALELMKKAASKGLHQAVNGLGWYYHK---FKKNYAKAAKYWLKA 790
>sp|Q67XW5|UBP18_ARATH Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana
GN=UBP18 PE=2 SV=2
Length = 631
Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 289 RRCSVCGKVNYCSRACQAIDWKTRHKREC----VPPLAPLINDG 328
++CS C V YCS CQ DW + H+R C + L P +G
Sbjct: 70 KKCSRCKSVRYCSAECQRSDWSSGHQRNCRDYGITTLTPSAKNG 113
>sp|Q03162|MUB1_YEAST MYND-type zinc finger protein MUB1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MUB1 PE=1 SV=1
Length = 620
Score = 38.9 bits (89), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDW 309
G+R C+ CG+ E ++ +C C + YCSR CQ W
Sbjct: 508 GVRQCANFSCGKWEDFPRQFAKCRRCKRTKYCSRKCQLKAW 548
>sp|Q7TSV3|ZMY19_RAT Zinc finger MYND domain-containing protein 19 OS=Rattus norvegicus
GN=Zmynd19 PE=2 SV=1
Length = 227
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 19/113 (16%)
Query: 209 SKTRTRHQSYYFQLARATDAQIPCSPLLSDFGYNVEAPEVHPVNNFLKEWFESG--VSDL 266
+ ++ R QS Y+ + Q+P P+ F PV N + + +G V +
Sbjct: 115 TSSKQREQSLYWLAIQ----QLPTDPIEEQF----------PVLNVTRYYNANGDVVEEE 160
Query: 267 GNGLRL--CSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
N C Y C E ++ E+ C C YC CQ DW HK+ C
Sbjct: 161 ENSCTYYECHYPPCTVIEKQLREFNICGRCQVARYCGSQCQQKDWPA-HKKHC 212
>sp|Q9CQG3|ZMY19_MOUSE Zinc finger MYND domain-containing protein 19 OS=Mus musculus
GN=Zmynd19 PE=2 SV=1
Length = 227
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 19/113 (16%)
Query: 209 SKTRTRHQSYYFQLARATDAQIPCSPLLSDFGYNVEAPEVHPVNNFLKEWFESG--VSDL 266
+ ++ R QS Y+ + Q+P P+ F PV N + + +G V +
Sbjct: 115 TSSKQREQSLYWLAIQ----QLPTDPIEEQF----------PVLNVTRYYNANGDVVEEE 160
Query: 267 GNGLRL--CSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
N C Y C E ++ E+ C C YC CQ DW HK+ C
Sbjct: 161 ENSCTYYECHYPPCTVIEKQLREFNICGRCQVARYCGSQCQQKDWPA-HKKHC 212
>sp|Q96E35|ZMY19_HUMAN Zinc finger MYND domain-containing protein 19 OS=Homo sapiens
GN=ZMYND19 PE=1 SV=1
Length = 227
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 19/113 (16%)
Query: 209 SKTRTRHQSYYFQLARATDAQIPCSPLLSDFGYNVEAPEVHPVNNFLKEWFESG--VSDL 266
+ ++ R QS Y+ + Q+P P+ F PV N + + +G V +
Sbjct: 115 TSSKQREQSLYWLAIQ----QLPTDPIEEQF----------PVLNVTRYYNANGDVVEEE 160
Query: 267 GNGLRL--CSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
N C Y C E ++ E+ C C YC CQ DW HK+ C
Sbjct: 161 ENSCTYYECHYPPCTVIEKQLREFNICGRCQVARYCGSQCQQKDWPA-HKKHC 212
>sp|P87311|MUB1_SCHPO MYND-type zinc finger protein C31F10.10c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC31F10.10c PE=3
SV=1
Length = 574
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
G+R C+ C + E ++ +C C + YCS+ CQ W H R C
Sbjct: 476 GIRRCANLLCNKWEEHSRQFAKCRRCRRTKYCSKECQHQAWPG-HSRWC 523
>sp|Q9N3Q8|DAF25_CAEEL Dauer abnormal formation protein 25 OS=Caenorhabditis elegans
GN=daf-25 PE=1 SV=2
Length = 388
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 272 LCSY-SGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
+C + S CG P + +RC+ C K+ YCS+ CQ DW HK+ C
Sbjct: 317 VCQFCSVCGHPGAK----KRCTQC-KLAYCSQECQKFDWPI-HKKVC 357
>sp|Q54ZX8|Y7331_DICDI SET and MYND domain-containing protein DDB_G0277331
OS=Dictyostelium discoideum GN=DDB_G0277331 PE=3 SV=1
Length = 549
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 289 RRCSVCGKVNYCSRACQAIDWKTRHKREC 317
+RCS C V YCS CQ WK HK+EC
Sbjct: 88 KRCSNCKLVYYCSTDCQTKAWKI-HKQEC 115
>sp|Q8IV38|ANKY2_HUMAN Ankyrin repeat and MYND domain-containing protein 2 OS=Homo sapiens
GN=ANKMY2 PE=1 SV=1
Length = 441
Score = 35.4 bits (80), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 289 RRCSVCGKVNYCSRACQAIDWKTRHKREC 317
+RCSVC V YC + CQ W T HK+ C
Sbjct: 330 KRCSVCKMVIYCDQTCQKTHWFT-HKKIC 357
>sp|Q9Z1T5|DEAF1_MOUSE Deformed epidermal autoregulatory factor 1 homolog OS=Mus musculus
GN=Deaf1 PE=1 SV=1
Length = 566
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 278 CGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPLAPLINDGDADGLEGMV 337
CGR C+ C KVNYCS CQ DWK H+ C + + D E ++
Sbjct: 508 CGR-----EAMSECTGCHKVNYCSTFCQRKDWK-DHQHVCGQSASVTVQADDVHVEESVI 561
Query: 338 E 338
E
Sbjct: 562 E 562
>sp|O88450|DEAF1_RAT Deformed epidermal autoregulatory factor 1 homolog OS=Rattus
norvegicus GN=Deaf1 PE=2 SV=1
Length = 565
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 278 CGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPLAPLINDGDADGLEGMV 337
CGR C+ C KVNYCS CQ DWK H+ C + + D E ++
Sbjct: 507 CGR-----EAMSECTGCHKVNYCSTFCQRKDWK-DHQHVCGQSASVTVQADDVHVEESVI 560
Query: 338 E 338
E
Sbjct: 561 E 561
>sp|O77562|DEAF1_PANTR Deformed epidermal autoregulatory factor 1 homolog OS=Pan
troglodytes GN=DEAF1 PE=2 SV=1
Length = 565
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 278 CGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
CGR C+ C KVNYCS CQ DWK H+ C
Sbjct: 507 CGR-----EAMNECTGCHKVNYCSTFCQRKDWK-DHQHIC 540
>sp|Q5ZMD2|ANKY2_CHICK Ankyrin repeat and MYND domain-containing protein 2 OS=Gallus
gallus GN=ANKMY2 PE=2 SV=1
Length = 460
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 289 RRCSVCGKVNYCSRACQAIDWKTRHKREC 317
+RCSVC V YC + CQ W T HK+ C
Sbjct: 330 KRCSVCKVVMYCDQNCQKTHWFT-HKKVC 357
>sp|O75398|DEAF1_HUMAN Deformed epidermal autoregulatory factor 1 homolog OS=Homo sapiens
GN=DEAF1 PE=1 SV=1
Length = 565
Score = 35.0 bits (79), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 278 CGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKREC 317
CGR C+ C KVNYCS CQ DWK H+ C
Sbjct: 507 CGR-----EAMSECTGCHKVNYCSTFCQRKDWK-DHQHIC 540
>sp|Q5ZMQ9|PEX5_CHICK Peroxisomal targeting signal 1 receptor OS=Gallus gallus GN=PEX5
PE=2 SV=1
Length = 645
Score = 35.0 bits (79), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 21 DALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLSQAGPKALAVKAKNW 80
D L + L+ + L+S AP ++ L CKRLN R G ALA+ ++NW
Sbjct: 61 DELVGEFLQGQNAPLLSHAPQTLRWMTCWLRCKRLNSPAFRQAPQRAPGVAALAL-SENW 119
Query: 81 SDSAHRFLKRCVFAGNLEACYT 102
+ FL AG++ + Y
Sbjct: 120 T---QEFLAAADTAGDVSSDYN 138
>sp|P34226|SKT5_YEAST Protein SKT5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SKT5 PE=1 SV=1
Length = 696
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 111 LQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIGHVD 170
LQ S + K ++K ++ A Y LA +G+ G K+ L AA GH++
Sbjct: 252 LQFLKEAQSYLKKLSIKGYSDAQYLLADGYSSGAFGKIENKE---AFVLFQAAAKHGHIE 308
Query: 171 AVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202
+ HCL++G G ++ K L A +R
Sbjct: 309 SAYRASHCLEEGLGTTRDSRKSVNFLKFAASR 340
>sp|Q0V9D9|SELR1_XENTR Sel1 repeat-containing protein 1 OS=Xenopus tropicalis GN=selrc1
PE=2 SV=1
Length = 231
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 87 FLKRCVFAG--NLEACYTLGMIRFYCLQNRSSGTSLMA-----KAAMKSHAPALYSLAVI 139
FLK C G ++++C+ +G++ N +L A KA + A + ++L+ I
Sbjct: 96 FLKSCNKGGKKSIDSCHNVGLLSHDGRVNDDKPDALKARDYYNKACDGNFAASCFNLSAI 155
Query: 140 QFNGSGGGKNEKDLRAGVALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEA 199
G+ G KD+ + +A S+GH+ + G GV +N EK L +
Sbjct: 156 YLQGAPG--IPKDMNMALHFSEKACSLGHMWGCANASRMYKLGDGVAKNDEKAESL--KN 211
Query: 200 NAREFFQSVSKTRTRHQSY 218
AR+ + + + RT+ S+
Sbjct: 212 KARDLHR-MQQERTQQISF 229
>sp|Q3TPE9|ANKY2_MOUSE Ankyrin repeat and MYND domain-containing protein 2 OS=Mus musculus
GN=Ankmy2 PE=1 SV=1
Length = 440
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 289 RRCSVCGKVNYCSRACQAIDWKTRHKREC 317
+RCSVC V YC + CQ W HK+ C
Sbjct: 330 KRCSVCKMVIYCDQTCQKTHW-FAHKKMC 357
>sp|Q99MV1|TDRD1_MOUSE Tudor domain-containing protein 1 OS=Mus musculus GN=Tdrd1 PE=1
SV=2
Length = 1172
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 264 SDLGNGLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVP 319
+ LG LR + CG + RCS C + YCS ACQ DW + H C P
Sbjct: 152 NSLGPPLRSTTCHRCG-----LFGSLRCSQCKQTYYCSTACQRRDWSS-HSTICRP 201
>sp|Q0VCS9|ANKY2_BOVIN Ankyrin repeat and MYND domain-containing protein 2 OS=Bos taurus
GN=ANKMY2 PE=2 SV=1
Length = 442
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 289 RRCSVCGKVNYCSRACQAIDWKTRHKREC 317
+RCSVC V YC + CQ W HK+ C
Sbjct: 330 KRCSVCKMVIYCDQTCQKTHW-FAHKKIC 357
>sp|Q99ML0|ZMY10_MOUSE Zinc finger MYND domain-containing protein 10 OS=Mus musculus
GN=Zmynd10 PE=2 SV=2
Length = 440
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 289 RRCSVCGKVNYCSRACQAIDWKTRHKRECV 318
+RCS C V YC R CQ W+ +H + CV
Sbjct: 403 KRCSRCQNVWYCCRECQVKHWE-KHGKTCV 431
>sp|O81760|P2C63_ARATH Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana
GN=At4g33920 PE=1 SV=1
Length = 380
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 110 CLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFN 142
CL +R+SG L+ ++ ++ HA YS+AV+Q N
Sbjct: 12 CLGSRASGDGLLWQSELRPHAGGDYSIAVVQAN 44
>sp|A5PLI4|LR2BP_DANRE LRP2-binding protein OS=Danio rerio GN=lrp2bp PE=2 SV=1
Length = 343
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 87 FLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGG 146
LK G+ +A + LG + + +Q + L+ ALY LAVI ++G G
Sbjct: 48 LLKEKAETGDSQATFLLGQLHY--VQGCYAEAELIFDRIKDKDPQALYQLAVIYYDGLG- 104
Query: 147 GKNEKDLRAGVALCARAA-----SIGHV--DAVRELGHCLQDGYGVRQNIEKGRRLLIEA 199
++DL V R A G V A+ LG +G+GV+ + + RL + A
Sbjct: 105 --TKEDLGRAVEYMGRVAFWDSSEAGSVRYAALYNLGQAYLEGFGVQASSSEAERLWLLA 162
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,226,333
Number of Sequences: 539616
Number of extensions: 5379521
Number of successful extensions: 11421
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 11357
Number of HSP's gapped (non-prelim): 99
length of query: 348
length of database: 191,569,459
effective HSP length: 118
effective length of query: 230
effective length of database: 127,894,771
effective search space: 29415797330
effective search space used: 29415797330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)