Query 018965
Match_columns 348
No_of_seqs 415 out of 3170
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 08:47:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018965.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018965hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1klx_A Cysteine rich protein B 99.9 1.3E-26 4.3E-31 193.2 16.7 124 81-210 11-134 (138)
2 3e4b_A ALGK; tetratricopeptide 99.9 6.1E-25 2.1E-29 217.3 17.9 156 80-264 266-424 (452)
3 3rjv_A Putative SEL1 repeat pr 99.9 2.6E-24 9E-29 191.1 16.1 126 81-209 34-166 (212)
4 3rjv_A Putative SEL1 repeat pr 99.9 8.7E-24 3E-28 187.7 17.4 128 80-210 68-205 (212)
5 3e4b_A ALGK; tetratricopeptide 99.9 1.9E-21 6.6E-26 192.1 17.2 126 80-210 232-359 (452)
6 2xm6_A Protein corresponding t 99.8 5.6E-20 1.9E-24 182.3 18.2 127 81-210 95-224 (490)
7 1klx_A Cysteine rich protein B 99.8 3.1E-20 1.1E-24 154.3 13.8 95 81-178 41-138 (138)
8 2xm6_A Protein corresponding t 99.8 9.1E-20 3.1E-24 180.8 18.2 127 81-210 59-188 (490)
9 1ouv_A Conserved hypothetical 99.8 7.7E-17 2.6E-21 146.5 20.4 126 81-209 130-258 (273)
10 1ouv_A Conserved hypothetical 99.7 3.3E-16 1.1E-20 142.3 22.3 128 80-210 93-223 (273)
11 2d8q_A BLU protein, zinc finge 99.1 1.5E-10 5E-15 84.5 5.9 47 268-322 13-59 (70)
12 2dj8_A Protein CBFA2T1; zinc f 99.0 3.8E-10 1.3E-14 79.9 4.8 45 269-321 14-58 (60)
13 2od1_A Protein CBFA2T1; zinc f 99.0 3.6E-10 1.2E-14 80.0 4.3 46 268-321 11-56 (60)
14 2odd_A Protein CBFA2T1; MYND z 99.0 4E-10 1.4E-14 80.9 4.1 45 269-321 16-60 (64)
15 2jw6_A Deformed epidermal auto 98.9 5.3E-10 1.8E-14 76.8 4.2 43 269-319 8-50 (52)
16 4gyw_A UDP-N-acetylglucosamine 98.3 5.3E-06 1.8E-10 86.4 14.0 118 81-210 25-150 (723)
17 2pl2_A Hypothetical conserved 98.3 2.4E-05 8.1E-10 68.4 16.2 118 80-209 54-189 (217)
18 4ga2_A E3 SUMO-protein ligase 98.3 2.3E-06 7.8E-11 70.7 8.9 116 81-208 13-137 (150)
19 2pl2_A Hypothetical conserved 98.3 1.2E-05 4.1E-10 70.3 13.3 124 81-209 21-155 (217)
20 3gyz_A Chaperone protein IPGC; 98.2 6.6E-06 2.2E-10 68.6 10.5 99 96-206 35-137 (151)
21 3vtx_A MAMA; tetratricopeptide 98.2 0.00011 3.9E-09 61.3 18.2 117 81-209 55-177 (184)
22 4gco_A Protein STI-1; structur 98.2 1.5E-05 5.3E-10 63.7 11.8 101 97-209 13-119 (126)
23 1hh8_A P67PHOX, NCF-2, neutrop 98.2 1.7E-05 5.9E-10 67.9 12.2 111 81-204 22-152 (213)
24 3qww_A SET and MYND domain-con 98.1 7.9E-07 2.7E-11 87.2 3.1 49 269-323 48-96 (433)
25 2e2e_A Formate-dependent nitri 98.1 1.4E-05 4.7E-10 66.8 9.7 112 81-204 26-146 (177)
26 4gcn_A Protein STI-1; structur 98.1 2E-05 6.8E-10 63.0 9.9 93 97-201 8-111 (127)
27 3qwp_A SET and MYND domain-con 98.1 1.2E-06 4E-11 85.8 2.9 49 269-323 46-94 (429)
28 3vtx_A MAMA; tetratricopeptide 98.1 6.6E-05 2.2E-09 62.8 13.5 111 81-203 21-137 (184)
29 1xnf_A Lipoprotein NLPI; TPR, 98.1 4.4E-05 1.5E-09 67.4 12.9 110 81-202 21-140 (275)
30 2fo7_A Synthetic consensus TPR 98.1 0.00014 4.9E-09 56.0 14.5 110 81-202 17-132 (136)
31 4i17_A Hypothetical protein; T 98.1 7.9E-05 2.7E-09 64.7 14.2 114 80-205 22-149 (228)
32 4gyw_A UDP-N-acetylglucosamine 98.1 5.3E-05 1.8E-09 78.9 15.2 111 80-202 58-174 (723)
33 2xcb_A PCRH, regulatory protei 98.1 3E-05 1E-09 62.8 10.7 95 96-202 17-115 (142)
34 2vgx_A Chaperone SYCD; alterna 98.1 2.9E-05 1E-09 63.8 10.7 103 88-202 10-118 (148)
35 3sz7_A HSC70 cochaperone (SGT) 98.0 4.3E-05 1.5E-09 63.1 11.2 95 96-202 10-108 (164)
36 4gco_A Protein STI-1; structur 98.0 3.8E-05 1.3E-09 61.4 10.5 92 80-179 28-125 (126)
37 3n71_A Histone lysine methyltr 98.0 2.2E-06 7.7E-11 85.3 3.0 49 269-323 48-96 (490)
38 3upv_A Heat shock protein STI1 98.0 8.7E-05 3E-09 58.2 11.8 95 97-203 4-102 (126)
39 3qky_A Outer membrane assembly 98.0 5.2E-05 1.8E-09 67.5 11.3 118 81-203 31-178 (261)
40 3as5_A MAMA; tetratricopeptide 98.0 0.00018 6E-09 59.0 13.8 110 80-201 57-172 (186)
41 2lni_A Stress-induced-phosphop 98.0 8.5E-05 2.9E-09 57.8 11.3 95 96-202 15-113 (133)
42 3urz_A Uncharacterized protein 98.0 0.00016 5.5E-09 62.5 14.1 115 79-204 68-188 (208)
43 4abn_A Tetratricopeptide repea 97.9 5.4E-05 1.8E-09 74.5 12.1 126 81-210 118-263 (474)
44 4abn_A Tetratricopeptide repea 97.9 0.00014 4.9E-09 71.4 15.1 124 80-210 152-297 (474)
45 3q49_B STIP1 homology and U bo 97.9 0.00012 4E-09 57.9 12.0 97 94-202 6-106 (137)
46 2vq2_A PILW, putative fimbrial 97.9 0.00049 1.7E-08 58.3 16.8 111 80-202 57-176 (225)
47 2vq2_A PILW, putative fimbrial 97.9 0.00026 8.8E-09 60.1 14.5 112 81-203 24-143 (225)
48 2q7f_A YRRB protein; TPR, prot 97.9 0.00032 1.1E-08 60.5 15.3 112 80-203 106-223 (243)
49 2kck_A TPR repeat; tetratricop 97.9 6.6E-05 2.3E-09 56.5 9.6 97 95-203 4-107 (112)
50 4eqf_A PEX5-related protein; a 97.9 0.00015 5E-09 67.4 13.0 110 81-202 193-310 (365)
51 2ho1_A Type 4 fimbrial biogene 97.9 0.0002 6.8E-09 62.6 13.1 112 80-203 86-205 (252)
52 1elw_A TPR1-domain of HOP; HOP 97.8 0.00024 8.1E-09 53.7 11.8 96 96-203 3-102 (118)
53 2ho1_A Type 4 fimbrial biogene 97.8 0.00078 2.7E-08 58.7 16.7 112 80-203 120-239 (252)
54 4i17_A Hypothetical protein; T 97.8 0.00017 5.7E-09 62.6 12.2 100 92-203 2-106 (228)
55 1elr_A TPR2A-domain of HOP; HO 97.8 0.00012 4.2E-09 56.5 10.2 96 97-204 4-110 (131)
56 2dba_A Smooth muscle cell asso 97.8 0.00025 8.5E-09 56.3 12.3 97 95-203 26-129 (148)
57 4ga2_A E3 SUMO-protein ligase 97.8 0.00037 1.3E-08 57.1 13.1 93 81-180 47-145 (150)
58 2xev_A YBGF; tetratricopeptide 97.8 0.00014 4.7E-09 56.8 9.9 94 97-202 2-105 (129)
59 3as5_A MAMA; tetratricopeptide 97.8 0.00021 7.3E-09 58.5 11.4 111 81-203 24-140 (186)
60 3urz_A Uncharacterized protein 97.8 0.00014 4.9E-09 62.9 10.7 109 81-200 20-151 (208)
61 3u4t_A TPR repeat-containing p 97.8 0.00025 8.5E-09 62.6 12.5 111 81-204 53-173 (272)
62 3hym_B Cell division cycle pro 97.8 0.0012 3.9E-08 59.6 17.2 112 80-203 140-266 (330)
63 1na0_A Designed protein CTPR3; 97.8 0.00029 1E-08 53.6 11.4 94 97-202 9-106 (125)
64 4eqf_A PEX5-related protein; a 97.8 0.001 3.6E-08 61.5 17.2 110 81-202 115-276 (365)
65 1qqe_A Vesicular transport pro 97.8 0.00025 8.5E-09 64.7 12.6 112 81-203 53-188 (292)
66 2vsy_A XCC0866; transferase, g 97.8 0.00017 5.8E-09 72.1 12.2 116 80-204 38-159 (568)
67 2q7f_A YRRB protein; TPR, prot 97.8 0.00034 1.2E-08 60.3 12.7 112 80-203 72-189 (243)
68 1hxi_A PEX5, peroxisome target 97.7 0.00015 5.1E-09 57.4 9.3 90 101-202 21-114 (121)
69 2vsy_A XCC0866; transferase, g 97.7 0.00036 1.2E-08 69.7 13.9 91 81-176 73-169 (568)
70 3hym_B Cell division cycle pro 97.7 0.00054 1.9E-08 61.7 13.9 118 80-209 174-308 (330)
71 2ifu_A Gamma-SNAP; membrane fu 97.7 8.4E-05 2.9E-09 68.4 8.5 108 81-201 52-183 (307)
72 3ulq_A Response regulator aspa 97.7 0.00015 5.2E-09 68.3 10.4 110 81-202 159-293 (383)
73 1xnf_A Lipoprotein NLPI; TPR, 97.7 0.0031 1.1E-07 55.3 18.5 109 81-202 59-173 (275)
74 3rkv_A Putative peptidylprolyl 97.7 0.00029 1E-08 57.9 10.9 96 97-204 11-128 (162)
75 3uq3_A Heat shock protein STI1 97.7 0.00042 1.4E-08 60.1 12.5 96 96-203 138-237 (258)
76 1fch_A Peroxisomal targeting s 97.7 0.0007 2.4E-08 62.4 14.6 110 81-202 197-314 (368)
77 1na3_A Designed protein CTPR2; 97.7 0.0002 6.9E-09 52.1 8.7 77 96-180 8-88 (91)
78 2h6f_A Protein farnesyltransfe 97.7 0.00014 4.7E-09 69.9 9.8 111 81-202 113-229 (382)
79 2pzi_A Probable serine/threoni 97.7 0.00018 6E-09 74.2 11.1 118 80-210 448-573 (681)
80 1fch_A Peroxisomal targeting s 97.7 0.0027 9.4E-08 58.3 18.2 111 81-203 114-281 (368)
81 2vyi_A SGTA protein; chaperone 97.7 0.0005 1.7E-08 52.8 11.2 96 96-203 11-110 (131)
82 3edt_B KLC 2, kinesin light ch 97.7 0.0011 3.9E-08 57.9 14.9 110 81-202 59-198 (283)
83 1na0_A Designed protein CTPR3; 97.7 0.00058 2E-08 51.9 11.4 92 81-180 25-122 (125)
84 1a17_A Serine/threonine protei 97.7 0.00065 2.2E-08 54.9 12.3 108 81-200 29-144 (166)
85 1w3b_A UDP-N-acetylglucosamine 97.7 0.0017 6E-08 60.6 16.9 112 80-203 252-369 (388)
86 1a17_A Serine/threonine protei 97.7 0.00056 1.9E-08 55.3 11.8 95 97-203 13-111 (166)
87 3u4t_A TPR repeat-containing p 97.6 0.00033 1.1E-08 61.8 11.0 111 80-202 18-137 (272)
88 2lni_A Stress-induced-phosphop 97.6 0.00054 1.8E-08 53.1 11.0 92 81-180 32-129 (133)
89 3ulq_A Response regulator aspa 97.6 0.00019 6.4E-09 67.6 9.8 110 80-201 118-252 (383)
90 3edt_B KLC 2, kinesin light ch 97.6 0.00015 5.1E-09 63.7 8.5 110 81-202 24-156 (283)
91 1elw_A TPR1-domain of HOP; HOP 97.6 0.001 3.6E-08 50.0 12.0 92 81-180 20-117 (118)
92 3cv0_A Peroxisome targeting si 97.6 0.0012 4.1E-08 59.4 14.4 111 81-203 154-270 (327)
93 3gyz_A Chaperone protein IPGC; 97.6 0.0011 3.6E-08 55.0 12.8 81 80-168 51-135 (151)
94 3uq3_A Heat shock protein STI1 97.6 0.00046 1.6E-08 59.9 11.1 112 80-203 53-203 (258)
95 3u3w_A Transcriptional activat 97.6 0.00084 2.9E-08 60.9 13.1 110 81-201 131-265 (293)
96 2h6f_A Protein farnesyltransfe 97.6 0.00069 2.4E-08 64.9 12.7 115 81-203 148-270 (382)
97 2c2l_A CHIP, carboxy terminus 97.5 0.00079 2.7E-08 61.2 12.2 95 96-202 3-101 (281)
98 2fbn_A 70 kDa peptidylprolyl i 97.5 0.00074 2.5E-08 57.4 11.3 101 97-209 38-160 (198)
99 3gw4_A Uncharacterized protein 97.5 0.00089 3E-08 56.1 11.7 109 81-201 42-175 (203)
100 1hh8_A P67PHOX, NCF-2, neutrop 97.5 0.00048 1.6E-08 58.6 10.0 93 98-203 7-101 (213)
101 2vyi_A SGTA protein; chaperone 97.5 0.0012 4.3E-08 50.5 11.5 93 81-181 28-126 (131)
102 3mkr_A Coatomer subunit epsilo 97.5 0.0016 5.5E-08 59.5 14.0 117 80-210 116-239 (291)
103 3nf1_A KLC 1, kinesin light ch 97.5 0.00048 1.6E-08 61.6 10.2 77 81-165 127-223 (311)
104 2qfc_A PLCR protein; TPR, HTH, 97.5 0.00063 2.2E-08 61.7 11.1 110 80-201 130-265 (293)
105 3upv_A Heat shock protein STI1 97.5 0.00076 2.6E-08 52.7 10.1 92 80-179 19-122 (126)
106 2dba_A Smooth muscle cell asso 97.5 0.0014 4.7E-08 51.8 11.7 94 81-182 44-146 (148)
107 2r5s_A Uncharacterized protein 97.5 0.00021 7.1E-09 59.9 6.9 112 81-203 22-138 (176)
108 3qky_A Outer membrane assembly 97.4 0.00057 2E-08 60.6 9.9 103 93-203 11-127 (261)
109 3q15_A PSP28, response regulat 97.4 0.00058 2E-08 64.2 10.3 110 81-202 157-290 (378)
110 2fo7_A Synthetic consensus TPR 97.4 0.0018 6.1E-08 49.5 11.5 94 98-203 2-99 (136)
111 1w3b_A UDP-N-acetylglucosamine 97.4 0.002 6.7E-08 60.3 13.9 110 81-202 151-266 (388)
112 3ro3_A PINS homolog, G-protein 97.4 0.00068 2.3E-08 53.9 9.2 109 81-201 25-157 (164)
113 3q15_A PSP28, response regulat 97.4 0.00045 1.5E-08 65.0 9.3 110 80-201 116-250 (378)
114 3sz7_A HSC70 cochaperone (SGT) 97.4 0.0008 2.7E-08 55.3 9.8 89 81-177 27-121 (164)
115 2xpi_A Anaphase-promoting comp 97.4 0.0046 1.6E-07 61.0 16.9 112 80-203 456-580 (597)
116 3nf1_A KLC 1, kinesin light ch 97.4 0.00078 2.7E-08 60.2 10.3 110 81-202 43-182 (311)
117 2vgx_A Chaperone SYCD; alterna 97.4 0.0032 1.1E-07 51.3 13.1 79 80-166 36-118 (148)
118 3ma5_A Tetratricopeptide repea 97.4 0.00093 3.2E-08 50.6 9.1 81 94-182 4-90 (100)
119 1elr_A TPR2A-domain of HOP; HO 97.4 0.0012 4.1E-08 50.6 10.0 92 81-180 20-123 (131)
120 1p5q_A FKBP52, FK506-binding p 97.4 0.00094 3.2E-08 62.4 11.0 115 83-209 131-268 (336)
121 3mkr_A Coatomer subunit epsilo 97.4 0.0024 8.3E-08 58.3 13.6 110 81-202 81-195 (291)
122 3k9i_A BH0479 protein; putativ 97.4 0.00031 1E-08 54.7 6.4 78 113-201 5-89 (117)
123 1p5q_A FKBP52, FK506-binding p 97.4 0.0014 4.8E-08 61.2 12.0 107 81-199 163-291 (336)
124 2c2l_A CHIP, carboxy terminus 97.4 0.0018 6.3E-08 58.7 12.3 78 81-166 20-101 (281)
125 2xpi_A Anaphase-promoting comp 97.3 0.0076 2.6E-07 59.4 17.5 111 80-202 388-504 (597)
126 1ihg_A Cyclophilin 40; ppiase 97.3 0.0011 3.8E-08 63.1 11.0 101 97-209 223-345 (370)
127 2fbn_A 70 kDa peptidylprolyl i 97.3 0.0019 6.3E-08 54.8 11.3 93 81-181 54-168 (198)
128 2y4t_A DNAJ homolog subfamily 97.3 0.0055 1.9E-07 58.0 15.8 111 81-203 42-173 (450)
129 2kat_A Uncharacterized protein 97.3 0.0024 8.1E-08 49.0 10.9 75 83-165 3-81 (115)
130 3ieg_A DNAJ homolog subfamily 97.3 0.0084 2.9E-07 54.2 16.2 111 81-203 87-218 (359)
131 2y4t_A DNAJ homolog subfamily 97.3 0.0049 1.7E-07 58.3 15.1 81 111-202 156-240 (450)
132 2xcb_A PCRH, regulatory protei 97.3 0.0013 4.3E-08 52.9 9.4 78 81-166 34-115 (142)
133 4gcn_A Protein STI-1; structur 97.3 0.0021 7.2E-08 50.9 10.5 87 81-175 24-122 (127)
134 3cv0_A Peroxisome targeting si 97.3 0.015 5.1E-07 52.0 17.5 80 113-203 153-236 (327)
135 2ifu_A Gamma-SNAP; membrane fu 97.3 0.0012 3.9E-08 60.6 10.0 107 81-200 92-222 (307)
136 1qqe_A Vesicular transport pro 97.3 0.0017 5.8E-08 59.0 11.0 112 80-203 92-229 (292)
137 2pzi_A Probable serine/threoni 97.2 0.00054 1.8E-08 70.5 8.2 117 81-210 407-539 (681)
138 3ieg_A DNAJ homolog subfamily 97.2 0.01 3.5E-07 53.7 16.0 88 80-175 135-228 (359)
139 4f3v_A ESX-1 secretion system 97.2 0.0047 1.6E-07 56.8 13.6 112 80-204 117-239 (282)
140 2gw1_A Mitochondrial precursor 97.2 0.0014 4.8E-08 63.0 10.7 60 81-141 320-383 (514)
141 1hxi_A PEX5, peroxisome target 97.2 0.0014 4.7E-08 51.6 8.8 79 80-166 32-114 (121)
142 2l6j_A TPR repeat-containing p 97.2 0.0023 8E-08 48.0 9.6 77 96-180 3-89 (111)
143 3k9i_A BH0479 protein; putativ 97.2 0.0005 1.7E-08 53.4 5.8 84 81-172 6-98 (117)
144 2gw1_A Mitochondrial precursor 97.2 0.0047 1.6E-07 59.3 13.7 115 81-204 55-268 (514)
145 4g1t_A Interferon-induced prot 97.2 0.0019 6.4E-08 61.9 10.8 116 81-203 154-277 (472)
146 2yhc_A BAMD, UPF0169 lipoprote 97.2 0.0032 1.1E-07 54.7 11.3 118 81-203 20-177 (225)
147 3u3w_A Transcriptional activat 97.2 0.0057 1.9E-07 55.3 13.3 110 80-201 90-224 (293)
148 1zu2_A Mitochondrial import re 97.2 0.00067 2.3E-08 57.0 6.4 51 153-203 62-121 (158)
149 1zu2_A Mitochondrial import re 97.1 0.0011 3.9E-08 55.6 7.8 84 81-167 18-121 (158)
150 2qfc_A PLCR protein; TPR, HTH, 97.1 0.0059 2E-07 55.2 13.3 110 81-202 91-225 (293)
151 1kt0_A FKBP51, 51 kDa FK506-bi 97.1 0.0023 7.9E-08 62.5 11.2 109 83-203 252-381 (457)
152 4a1s_A PINS, partner of inscut 97.1 0.0019 6.5E-08 60.6 10.1 110 81-202 199-332 (411)
153 2kck_A TPR repeat; tetratricop 97.1 0.003 1E-07 47.0 9.4 81 80-167 21-107 (112)
154 4a1s_A PINS, partner of inscut 97.1 0.0018 6.2E-08 60.7 9.9 113 81-205 239-375 (411)
155 3gw4_A Uncharacterized protein 97.1 0.0016 5.6E-08 54.5 8.6 108 81-201 8-135 (203)
156 3fp2_A TPR repeat-containing p 97.1 0.0051 1.8E-07 59.6 13.0 110 81-202 259-373 (537)
157 2xev_A YBGF; tetratricopeptide 97.1 0.0062 2.1E-07 47.0 11.0 88 81-176 18-117 (129)
158 2r5s_A Uncharacterized protein 97.1 0.0027 9.4E-08 52.8 9.3 110 80-200 55-171 (176)
159 3rkv_A Putative peptidylprolyl 97.1 0.0036 1.2E-07 51.1 10.0 91 81-179 27-142 (162)
160 2if4_A ATFKBP42; FKBP-like, al 97.0 0.003 1E-07 59.0 10.1 94 97-202 179-293 (338)
161 1wao_1 Serine/threonine protei 97.0 0.0018 6.3E-08 63.7 8.7 106 81-198 22-135 (477)
162 1ihg_A Cyclophilin 40; ppiase 97.0 0.0038 1.3E-07 59.4 10.5 92 81-180 239-352 (370)
163 2hr2_A Hypothetical protein; a 97.0 0.0035 1.2E-07 52.7 9.0 94 96-201 10-130 (159)
164 2v5f_A Prolyl 4-hydroxylase su 96.9 0.0045 1.5E-07 47.5 9.0 73 96-176 4-87 (104)
165 2kat_A Uncharacterized protein 96.9 0.005 1.7E-07 47.2 9.3 76 116-202 3-82 (115)
166 1wao_1 Serine/threonine protei 96.9 0.0016 5.5E-08 64.1 7.9 95 97-203 6-104 (477)
167 3q49_B STIP1 homology and U bo 96.9 0.0072 2.5E-07 47.2 10.3 78 81-166 25-106 (137)
168 3sf4_A G-protein-signaling mod 96.9 0.015 5.1E-07 53.8 14.0 110 81-202 203-336 (406)
169 2if4_A ATFKBP42; FKBP-like, al 96.9 0.0031 1.1E-07 58.9 9.2 110 81-201 195-327 (338)
170 4g1t_A Interferon-induced prot 96.9 0.0059 2E-07 58.4 11.3 119 80-203 109-243 (472)
171 3qou_A Protein YBBN; thioredox 96.9 0.0031 1.1E-07 57.3 8.9 111 81-203 133-249 (287)
172 1kt0_A FKBP51, 51 kDa FK506-bi 96.9 0.0061 2.1E-07 59.4 11.4 93 81-181 284-397 (457)
173 3fp2_A TPR repeat-containing p 96.9 0.011 3.6E-07 57.3 12.9 111 81-203 292-408 (537)
174 3ro2_A PINS homolog, G-protein 96.8 0.013 4.3E-07 52.2 12.3 91 98-200 184-290 (338)
175 3ro3_A PINS homolog, G-protein 96.8 0.013 4.4E-07 46.1 11.1 94 97-202 9-118 (164)
176 3sf4_A G-protein-signaling mod 96.8 0.0045 1.5E-07 57.4 9.5 110 80-201 24-175 (406)
177 1fs1_A SKP2 F-BOX, cyclin A/CD 96.7 0.00075 2.6E-08 45.6 2.7 47 15-66 4-50 (53)
178 3ro2_A PINS homolog, G-protein 96.7 0.0099 3.4E-07 52.9 10.9 113 81-201 21-171 (338)
179 3ma5_A Tetratricopeptide repea 96.7 0.0059 2E-07 46.0 7.9 65 127-202 4-70 (100)
180 1na3_A Designed protein CTPR2; 96.7 0.0067 2.3E-07 43.7 7.8 60 81-141 25-88 (91)
181 2ond_A Cleavage stimulation fa 96.6 0.028 9.6E-07 51.1 13.4 111 81-202 115-232 (308)
182 2yhc_A BAMD, UPF0169 lipoprote 96.5 0.01 3.5E-07 51.4 9.2 99 96-202 3-125 (225)
183 2ond_A Cleavage stimulation fa 96.4 0.029 1E-06 51.0 12.2 111 81-202 80-198 (308)
184 2e2e_A Formate-dependent nitri 96.3 0.021 7.2E-07 46.9 9.7 79 81-167 60-145 (177)
185 1pc2_A Mitochondria fission pr 96.1 0.029 9.9E-07 46.6 8.9 89 113-209 13-109 (152)
186 2hr2_A Hypothetical protein; a 96.0 0.026 8.8E-07 47.3 8.5 78 81-166 27-131 (159)
187 1hz4_A MALT regulatory protein 96.0 0.099 3.4E-06 48.2 13.4 110 81-202 69-203 (373)
188 1hz4_A MALT regulatory protein 95.9 0.057 1.9E-06 49.9 11.5 110 81-202 30-164 (373)
189 1pc2_A Mitochondria fission pr 95.7 0.072 2.5E-06 44.2 9.7 88 82-176 15-112 (152)
190 3qou_A Protein YBBN; thioredox 95.5 0.074 2.5E-06 48.0 10.3 110 80-201 166-283 (287)
191 2l6j_A TPR repeat-containing p 95.5 0.055 1.9E-06 40.1 8.0 65 129-204 3-69 (111)
192 2v5f_A Prolyl 4-hydroxylase su 95.5 0.063 2.1E-06 40.8 8.3 71 129-210 4-85 (104)
193 1xi4_A Clathrin heavy chain; a 95.0 0.37 1.3E-05 53.3 15.0 100 82-199 1093-1221(1630)
194 3bee_A Putative YFRE protein; 95.0 0.12 3.9E-06 38.9 8.2 64 96-166 5-72 (93)
195 4f3v_A ESX-1 secretion system 94.9 0.17 5.8E-06 46.3 10.6 78 81-166 151-237 (282)
196 2kc7_A BFR218_protein; tetratr 94.9 0.11 3.7E-06 38.0 7.8 64 101-172 4-72 (99)
197 2ooe_A Cleavage stimulation fa 94.8 0.33 1.1E-05 47.4 13.4 112 81-203 337-455 (530)
198 2yqq_A Zinc finger HIT domain- 94.7 0.046 1.6E-06 37.3 4.6 43 266-321 8-50 (56)
199 3bee_A Putative YFRE protein; 94.6 0.17 5.9E-06 37.9 8.4 71 127-205 3-75 (93)
200 3u64_A Protein TP_0956; tetrat 94.3 0.23 7.8E-06 45.7 9.8 102 96-202 151-269 (301)
201 2ooe_A Cleavage stimulation fa 93.1 0.48 1.6E-05 46.2 10.5 110 82-202 303-420 (530)
202 2kc7_A BFR218_protein; tetratr 92.5 0.32 1.1E-05 35.4 6.5 59 134-203 4-65 (99)
203 3mv2_B Coatomer subunit epsilo 92.4 0.37 1.3E-05 44.6 8.1 110 84-204 85-209 (310)
204 1xi4_A Clathrin heavy chain; a 92.2 0.8 2.7E-05 50.7 11.4 100 81-203 1065-1164(1630)
205 3l2o_B F-box only protein 4; s 92.0 0.039 1.3E-06 50.8 0.9 46 17-67 2-47 (312)
206 3mv2_B Coatomer subunit epsilo 91.5 2.2 7.6E-05 39.3 12.3 118 79-210 114-260 (310)
207 3ly7_A Transcriptional activat 90.9 5.4 0.00019 37.7 14.5 114 81-205 215-342 (372)
208 3qww_A SET and MYND domain-con 90.8 2.2 7.4E-05 41.2 12.0 80 111-201 311-410 (433)
209 1nzn_A CGI-135 protein, fissio 89.8 2.6 8.8E-05 33.6 9.6 89 113-209 16-112 (126)
210 2e31_A FBS1, F-box only protei 88.6 0.17 5.8E-06 46.6 2.1 43 18-65 49-92 (297)
211 4b4t_Q 26S proteasome regulato 87.7 6.4 0.00022 36.3 12.6 110 81-202 71-204 (434)
212 3n71_A Histone lysine methyltr 87.6 2.7 9.4E-05 41.2 10.3 81 110-201 321-421 (490)
213 3dra_A Protein farnesyltransfe 87.4 3.8 0.00013 37.5 10.6 110 83-202 164-287 (306)
214 3u64_A Protein TP_0956; tetrat 86.9 2.2 7.6E-05 39.1 8.4 81 81-167 179-270 (301)
215 4b4t_Q 26S proteasome regulato 86.4 3.2 0.00011 38.4 9.7 77 81-165 111-203 (434)
216 3qwp_A SET and MYND domain-con 86.2 4.3 0.00015 39.0 10.6 81 110-201 299-399 (429)
217 1x4s_A Protein FON, zinc finge 85.5 0.49 1.7E-05 32.5 2.4 39 270-318 11-49 (59)
218 1dce_A Protein (RAB geranylger 84.9 8.8 0.0003 38.2 12.5 117 81-203 89-222 (567)
219 1nzn_A CGI-135 protein, fissio 82.3 14 0.00048 29.2 10.2 86 83-175 19-114 (126)
220 2ast_B S-phase kinase-associat 77.3 0.82 2.8E-05 41.5 1.6 47 16-67 5-51 (336)
221 3dss_A Geranylgeranyl transfer 75.5 49 0.0017 30.4 13.3 123 81-204 126-269 (331)
222 2ovr_B FBW7, F-BOX/WD repeat p 74.9 1.4 4.9E-05 41.4 2.6 46 16-66 15-60 (445)
223 3o48_A Mitochondria fission 1 73.5 19 0.00065 28.8 8.5 73 129-209 39-116 (134)
224 1dce_A Protein (RAB geranylger 72.1 16 0.00055 36.2 9.7 102 81-182 125-239 (567)
225 3v7d_B Cell division control p 68.3 1.2 4.1E-05 42.0 0.4 42 19-65 14-56 (464)
226 1b89_A Protein (clathrin heavy 67.1 9.1 0.00031 37.1 6.4 59 95-170 120-178 (449)
227 2p1m_B Transport inhibitor res 66.6 2.5 8.6E-05 41.5 2.4 37 18-58 4-40 (594)
228 1y8m_A FIS1; mitochondria, unk 66.5 48 0.0017 26.7 9.6 73 129-209 38-115 (144)
229 3dra_A Protein farnesyltransfe 65.4 13 0.00044 33.9 6.8 79 81-166 202-287 (306)
230 3ly7_A Transcriptional activat 60.6 22 0.00076 33.5 7.5 87 94-192 274-361 (372)
231 1p22_A F-BOX/WD-repeat protein 59.2 1.6 5.6E-05 41.0 -0.6 44 18-66 9-56 (435)
232 1ya0_A SMG-7 transcript varian 58.7 26 0.00088 34.3 8.0 74 100-181 155-232 (497)
233 1b89_A Protein (clathrin heavy 54.1 2.7 9.1E-05 40.9 0.0 100 81-199 48-148 (449)
234 1lv3_A Hypothetical protein YA 52.1 6.1 0.00021 27.8 1.6 15 296-310 27-41 (68)
235 4e6h_A MRNA 3'-END-processing 50.8 81 0.0028 32.0 10.5 114 81-204 394-535 (679)
236 4e6h_A MRNA 3'-END-processing 48.7 1.6E+02 0.0054 29.8 12.2 112 81-202 450-570 (679)
237 1y8m_A FIS1; mitochondria, unk 39.9 1.4E+02 0.005 23.9 8.3 74 95-175 37-117 (144)
238 4g26_A Pentatricopeptide repea 36.9 2.9E+02 0.0099 26.5 18.6 113 81-205 86-207 (501)
239 3lpz_A GET4 (YOR164C homolog); 36.8 2.5E+02 0.0086 25.8 13.4 114 81-198 12-161 (336)
240 3dss_A Geranylgeranyl transfer 36.2 2.5E+02 0.0085 25.5 13.6 117 81-203 90-223 (331)
241 3mkq_A Coatomer beta'-subunit; 34.3 3.5E+02 0.012 26.7 12.5 85 94-199 678-762 (814)
242 3o48_A Mitochondria fission 1 33.6 1.8E+02 0.0061 23.1 8.3 73 96-175 39-118 (134)
243 1wy6_A Hypothetical protein ST 33.0 78 0.0027 25.7 5.5 40 130-176 125-164 (172)
244 3ogk_B Coronatine-insensitive 31.7 14 0.00046 36.1 1.0 34 21-58 14-47 (592)
245 3ffl_A Anaphase-promoting comp 31.5 63 0.0021 26.7 4.9 27 99-126 65-91 (167)
246 1ya0_A SMG-7 transcript varian 30.9 91 0.0031 30.4 6.8 61 81-142 168-232 (497)
247 1ihs_I Hirutonin; hydrolase(se 29.1 36 0.0012 18.6 1.9 18 14-31 6-23 (26)
248 2cpt_A SKD1 protein, vacuolar 28.2 1.3E+02 0.0044 23.2 5.9 32 81-126 15-46 (117)
249 3q7a_A Farnesyltransferase alp 26.6 3.7E+02 0.013 24.6 10.8 123 81-203 105-238 (349)
250 4g26_A Pentatricopeptide repea 22.2 5.1E+02 0.018 24.6 14.2 113 81-204 42-171 (501)
251 3q7a_A Farnesyltransferase alp 21.0 4.8E+02 0.016 23.8 11.7 119 80-203 69-197 (349)
252 5gds_I Hirunorm V; serine prot 20.8 36 0.0012 18.6 1.0 15 14-28 11-25 (26)
253 1wy6_A Hypothetical protein ST 20.5 2.5E+02 0.0085 22.8 6.3 90 110-210 73-162 (172)
254 4ae4_A Ubiquitin-associated pr 20.3 2.9E+02 0.01 21.1 10.5 100 85-199 9-114 (118)
No 1
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.95 E-value=1.3e-26 Score=193.17 Aligned_cols=124 Identities=18% Similarity=0.156 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALC 160 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~ 160 (348)
.++|+.||+++++.|+++|+ ||.+|. ...+.++|++||++|+++|++.|+++||.+|..|.| +++|+++|++||
T Consensus 11 ~~~A~~~~~~aa~~g~~~a~--lg~~y~-~g~~~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g---~~~d~~~A~~~~ 84 (138)
T 1klx_A 11 LKKAIQYYVKACELNEMFGC--LSLVSN-SQINKQKLFQYLSKACELNSGNGCRFLGDFYENGKY---VKKDLRKAAQYY 84 (138)
T ss_dssp HHHHHHHHHHHHHTTCTTHH--HHHHTC-TTSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSS---SCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHhhh--HHHHHH-cCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCC---CCccHHHHHHHH
Confidence 78999999999999999999 999998 345667799999999999999999999999999999 999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCHHHHHh
Q 018965 161 ARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFFQSVSK 210 (348)
Q Consensus 161 ~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~~A~~~ 210 (348)
++|++.|++.|+++||.+|.+|.||++|.++|++||++|+++|++.|+.+
T Consensus 85 ~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A~~~ 134 (138)
T 1klx_A 85 SKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACGI 134 (138)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999975
No 2
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.93 E-value=6.1e-25 Score=217.26 Aligned_cols=156 Identities=13% Similarity=0.095 Sum_probs=130.3
Q ss_pred cHHHHHHHHHHHHHCCCHHHHHHhhhhhh---hccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 80 WSDSAHRFLKRCVFAGNLEACYTLGMIRF---YCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G~~~A~~~Lg~~y~---~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
..++|+.||++|++.|+++|+++||.+|. |+++|.++|+.||++|+ .|++.|+++||.+|..|.| +++|+.+|
T Consensus 266 d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa-~g~~~A~~~Lg~~y~~G~g---~~~d~~~A 341 (452)
T 3e4b_A 266 DVEQMMKYLDNGRAADQPRAELLLGKLYYEGKWVPADAKAAEAHFEKAV-GREVAADYYLGQIYRRGYL---GKVYPQKA 341 (452)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHTTT-TTCHHHHHHHHHHHHTTTT---SSCCHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHh-CCCHHHHHHHHHHHHCCCC---CCcCHHHH
Confidence 47888888888888888888888888887 57788888888888888 8888888888888888888 88888888
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCHHHHHhhhhhhhhhhhhhhcccccCCCCCCCc
Q 018965 157 VALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFFQSVSKTRTRHQSYYFQLARATDAQIPCSPLL 236 (348)
Q Consensus 157 ~~~~~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 236 (348)
++||++|++.|++.|+++||.+|..|.||++|+.+|..||++|+++|++.|+.. +
T Consensus 342 ~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g~~~a~~~-------------------------l 396 (452)
T 3e4b_A 342 LDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDTPEANDL-------------------------A 396 (452)
T ss_dssp HHHHHHHHTTTCTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTCCHHHHHH-------------------------H
T ss_pred HHHHHHHHhhChHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCCCHHHHHH-------------------------H
Confidence 888888888888888888888888888888888888888888888888888763 4
Q ss_pred ccccccCCCCCcchhhhHHHHHHhhccC
Q 018965 237 SDFGYNVEAPEVHPVNNFLKEWFESGVS 264 (348)
Q Consensus 237 ~~~g~~~p~~e~~~A~rf~~ew~~~~~~ 264 (348)
..+...+++.+...+..++.+|....+.
T Consensus 397 ~~l~~~~~~~~~~~a~~~~~~~~~~~~~ 424 (452)
T 3e4b_A 397 TQLEAPLTPAQRAEGQRLVQQELAARGT 424 (452)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhccc
Confidence 4455667788888899999999887543
No 3
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.92 E-value=2.6e-24 Score=191.07 Aligned_cols=126 Identities=17% Similarity=0.114 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhh--hccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRF--YCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGVA 158 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~--~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~ 158 (348)
.++|+.||++|++.|+++|+++||.+|. ++++|.++|++||++|++.|++.|+++||.+|..|.| +++|+.+|++
T Consensus 34 ~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g---~~~d~~~A~~ 110 (212)
T 3rjv_A 34 YQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQA---GATDVAHAIT 110 (212)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGG---SSCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCC---CccCHHHHHH
Confidence 4455555555555555555555555554 3444555555555555555555555555555555555 5555555555
Q ss_pred HHHHHHhCCC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc-CCHHHHH
Q 018965 159 LCARAASIGH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR-EFFQSVS 209 (348)
Q Consensus 159 ~~~kAA~~G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~-G~~~A~~ 209 (348)
||++|++.|+ +.|+++||.+|..|.||++|.++|+.||++|++. |++.|+.
T Consensus 111 ~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~a~~ 166 (212)
T 3rjv_A 111 LLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEY 166 (212)
T ss_dssp HHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSCTTHHHH
T ss_pred HHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCCCHHHHH
Confidence 5555555555 5555555555555555555555555555555555 5555544
No 4
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.91 E-value=8.7e-24 Score=187.70 Aligned_cols=128 Identities=18% Similarity=0.111 Sum_probs=123.9
Q ss_pred cHHHHHHHHHHHHHCCCHHHHHHhhhhhh---hccCCHHHHHHHHHHHHhCCC----HHHHHHHHHHHHccCCCCCCccC
Q 018965 80 WSDSAHRFLKRCVFAGNLEACYTLGMIRF---YCLQNRSSGTSLMAKAAMKSH----APALYSLAVIQFNGSGGGKNEKD 152 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G~~~A~~~Lg~~y~---~~~~d~~~A~~~~~~AA~~G~----~~A~~~Lg~~y~~G~g~~~~~~d 152 (348)
..++|+.||++|++.|++.|+++||.+|. ++.+|.++|++||++|++.|+ +.|+++||.+|..|.| +++|
T Consensus 68 ~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g---~~~d 144 (212)
T 3rjv_A 68 DYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVH---GPED 144 (212)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSS---SSCC
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCC---CCCC
Confidence 48999999999999999999999999998 679999999999999999999 9999999999999999 9999
Q ss_pred HHHHHHHHHHHHhC-CCHHHHHHHHHHHhccCC--CCCCHHHHHHHHHHHHhcCCHHHHHh
Q 018965 153 LRAGVALCARAASI-GHVDAVRELGHCLQDGYG--VRQNIEKGRRLLIEANAREFFQSVSK 210 (348)
Q Consensus 153 ~~~A~~~~~kAA~~-G~~~A~~~Lg~~y~~G~G--v~~d~~~A~~w~~~Aa~~G~~~A~~~ 210 (348)
+.+|++||++|++. |++.|+++||.+|..|.| |++|.++|+.||++|+++|+..|+..
T Consensus 145 ~~~A~~~~~~A~~~~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~A~~~ 205 (212)
T 3rjv_A 145 DVKASEYFKGSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEE 205 (212)
T ss_dssp HHHHHHHHHHHHHTSCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999 999999999999999988 99999999999999999999999874
No 5
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.87 E-value=1.9e-21 Score=192.13 Aligned_cols=126 Identities=17% Similarity=0.120 Sum_probs=121.7
Q ss_pred cHHHHHHHHHHHHHCCCHHHHHHhhhhhh--hccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 80 WSDSAHRFLKRCVFAGNLEACYTLGMIRF--YCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G~~~A~~~Lg~~y~--~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
..++|+.||++++ .|++.|+++||.+|+ ...+|.++|+.||++|++.|++.|+++||.+|..|.| +++|+.+|+
T Consensus 232 d~~~A~~~~~~aa-~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g---~~~d~~~A~ 307 (452)
T 3e4b_A 232 DEKTAQALLEKIA-PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEGKW---VPADAKAAE 307 (452)
T ss_dssp CHHHHHHHHHHHG-GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSS---SCCCHHHHH
T ss_pred CHHHHHHHHHHHc-CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCC---CCCCHHHHH
Confidence 4899999999999 999999999999955 4689999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCHHHHHh
Q 018965 158 ALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFFQSVSK 210 (348)
Q Consensus 158 ~~~~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~~A~~~ 210 (348)
+||++|+ .|++.|+++||.+|..|.|+++|.++|+.||++|+++|++.|+.+
T Consensus 308 ~~~~~Aa-~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A~~~ 359 (452)
T 3e4b_A 308 AHFEKAV-GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFA 359 (452)
T ss_dssp HHHHTTT-TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTCTTHHHH
T ss_pred HHHHHHh-CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhChHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999986
No 6
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.84 E-value=5.6e-20 Score=182.28 Aligned_cols=127 Identities=18% Similarity=0.187 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhh---hccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRF---YCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~---~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
.++|+.||+++++.|++.|++.||.+|. |+++|.++|+.||++|+++|++.|++.||.+|..|.| +++|.++|+
T Consensus 95 ~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g---~~~d~~~A~ 171 (490)
T 2xm6_A 95 YAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDG---VTRDYVMAR 171 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSS---SCCCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCC---CCCCHHHHH
Confidence 5666666666666666666666666665 3466666666666666666666666666666666666 666666666
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCHHHHHh
Q 018965 158 ALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFFQSVSK 210 (348)
Q Consensus 158 ~~~~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~~A~~~ 210 (348)
+||++|++.|++.+++.||.+|..|.|+++|.++|+.||++|++.|++.++..
T Consensus 172 ~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~ 224 (490)
T 2xm6_A 172 EWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELGQLH 224 (490)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCCCHHHHHH
Confidence 66666666666666666666666666666666666666666666666666654
No 7
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.84 E-value=3.1e-20 Score=154.26 Aligned_cols=95 Identities=19% Similarity=0.249 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhh---hccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRF---YCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~---~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
.++|++||++|++.|++.|+++||.+|. ++++|.++|++||++|+++|++.|+++||.+|..|.| +++|+++|+
T Consensus 41 ~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~a~~~Lg~~y~~G~g---~~~d~~~A~ 117 (138)
T 1klx_A 41 KQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKG---VVKNEKQAV 117 (138)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSS---SCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHCCCC---CCcCHHHHH
Confidence 5679999999999999999999999998 6799999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHH
Q 018965 158 ALCARAASIGHVDAVRELGHC 178 (348)
Q Consensus 158 ~~~~kAA~~G~~~A~~~Lg~~ 178 (348)
+||++|++.|++.|+++|+.+
T Consensus 118 ~~~~~Aa~~g~~~A~~~l~~l 138 (138)
T 1klx_A 118 KTFEKACRLGSEDACGILNNY 138 (138)
T ss_dssp HHHHHHHHTTCHHHHHHC---
T ss_pred HHHHHHHHCCCHHHHHHHhhC
Confidence 999999999999999999864
No 8
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.83 E-value=9.1e-20 Score=180.77 Aligned_cols=127 Identities=23% Similarity=0.259 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhh---hccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRF---YCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~---~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
.++|+.||+++++.|+++|++.||.+|. |+++|.++|++||++|++.|++.|++.||.+|..|.| +++|+++|+
T Consensus 59 ~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g---~~~~~~~A~ 135 (490)
T 2xm6_A 59 LTQAMDWFRRAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNG---VKVDKAESV 135 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSS---SCCCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCC---CCCCHHHHH
Confidence 4556666666666666666666666655 3455666666666666666666666666666666655 556666666
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCHHHHHh
Q 018965 158 ALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFFQSVSK 210 (348)
Q Consensus 158 ~~~~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~~A~~~ 210 (348)
+||++|++.|++.+++.||.+|..|.|+++|.++|+.||++|++.|++.|+..
T Consensus 136 ~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~~~~a~~~ 188 (490)
T 2xm6_A 136 KWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQ 188 (490)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
Confidence 66666666666666666666666666666666666666666666666655554
No 9
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.75 E-value=7.7e-17 Score=146.46 Aligned_cols=126 Identities=14% Similarity=0.187 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhh---hccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRF---YCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~---~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
.++|+.+|+++++.+++.+++.||.+|. ++.+|.++|+.||++|++.|++.+++.||.+|..|.| +..|+++|+
T Consensus 130 ~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~---~~~~~~~A~ 206 (273)
T 1ouv_A 130 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEG---ATKNFKEAL 206 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCS---SCCCHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCC---CCccHHHHH
Confidence 4555555555555555555555555554 2345555555555555555555555555555555555 555555555
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCHHHHH
Q 018965 158 ALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFFQSVS 209 (348)
Q Consensus 158 ~~~~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~~A~~ 209 (348)
.||++|++.|++.++++||.+|..|.|+.+|.++|+.||++|++.|+..|+.
T Consensus 207 ~~~~~a~~~~~~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~ 258 (273)
T 1ouv_A 207 ARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACD 258 (273)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHHH
Confidence 5555555555555555555555555555555555555555555555555554
No 10
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.74 E-value=3.3e-16 Score=142.26 Aligned_cols=128 Identities=17% Similarity=0.184 Sum_probs=99.7
Q ss_pred cHHHHHHHHHHHHHCCCHHHHHHhhhhhh---hccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 80 WSDSAHRFLKRCVFAGNLEACYTLGMIRF---YCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G~~~A~~~Lg~~y~---~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
..++|+.+|+++++.+++.+++.||.+|. ++.+|.++|+.||++|++.|++.++++||.+|..|.| +..|+++|
T Consensus 93 ~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~---~~~~~~~A 169 (273)
T 1ouv_A 93 NTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG---TPKDLKKA 169 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSS---SCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCCC---CCCCHHHH
Confidence 36777888888888888888888887776 3477778888888888888888888888888877776 67778888
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCHHHHHh
Q 018965 157 VALCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFFQSVSK 210 (348)
Q Consensus 157 ~~~~~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~~A~~~ 210 (348)
+.||++|++.|++.+++.||.+|..|.|+..|.++|+.||++|++.+++.+...
T Consensus 170 ~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~ 223 (273)
T 1ouv_A 170 LASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFN 223 (273)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCCHHHHHH
Confidence 888888888888888888888888877777888888888888888777776654
No 11
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=99.08 E-value=1.5e-10 Score=84.50 Aligned_cols=47 Identities=34% Similarity=0.839 Sum_probs=40.0
Q ss_pred CccccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCCCCCC
Q 018965 268 NGLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPLA 322 (348)
Q Consensus 268 ~~~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~~~~~ 322 (348)
...+.|.+ |++. .+++|++|+.++|||++||+.||+. ||.+|..+..
T Consensus 13 ~~~~~C~~--C~~~-----~~~~Cs~Ck~v~YCs~eCQ~~~W~~-HK~~C~~~~~ 59 (70)
T 2d8q_A 13 PERPRCAY--CSAE-----ASKRCSRCQNEWYCCRECQVKHWEK-HGKTCVLAAQ 59 (70)
T ss_dssp CCCCBCSS--SCCB-----CCCBCTTTSCCBCSCHHHHHHTHHH-HHHHCCCCCC
T ss_pred CCCCcCCC--CCCc-----ccccCCCCCCEeeCCHHHhHHHHHH-HHHHHHHHHH
Confidence 34568875 7764 4699999999999999999999998 9999998764
No 12
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.99 E-value=3.8e-10 Score=79.92 Aligned_cols=45 Identities=36% Similarity=0.846 Sum_probs=38.3
Q ss_pred ccccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCCCCC
Q 018965 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPL 321 (348)
Q Consensus 269 ~~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~~~~ 321 (348)
....|.+ |++. .+++|++|+.++|||++||+.||+. ||.+|..+.
T Consensus 14 ~~~~C~~--C~~~-----~~~~Cs~C~~v~YCs~~CQ~~~W~~-Hk~~C~~~~ 58 (60)
T 2dj8_A 14 SSESCWN--CGRK-----ASETCSGCNTARYCGSFCQHKDWEK-HHHICSGPS 58 (60)
T ss_dssp CSCCCSS--SCSC-----CCEECTTTSCCEESSHHHHHHTHHH-HTTTSCCSS
T ss_pred CCccccc--CCCC-----CcccCCCCCCEeeeCHHHHHHHHHH-HHHHHHhcc
Confidence 3457885 7763 4699999999999999999999996 999998765
No 13
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=98.98 E-value=3.6e-10 Score=80.01 Aligned_cols=46 Identities=35% Similarity=0.827 Sum_probs=38.5
Q ss_pred CccccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCCCCC
Q 018965 268 NGLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPL 321 (348)
Q Consensus 268 ~~~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~~~~ 321 (348)
.....|.+ |++. .+++|++|+.++|||++||+.||+. ||.+|..+.
T Consensus 11 ~~~~~C~~--C~~~-----~~~~Cs~C~~v~YCs~~CQ~~dW~~-Hk~~C~~~~ 56 (60)
T 2od1_A 11 DSSESCWN--CGRK-----ASETCSGCNTARYCGSFCQHKDWEK-HHHICGQTL 56 (60)
T ss_dssp CCSSCCTT--TSSC-----CCEECTTTSCCEESSHHHHHHHHHH-HTTTSSCSS
T ss_pred CCCCcccc--CCCc-----ccccCCCCCCeeecCHHHHHHHHHH-HhHHHcccc
Confidence 34467885 7763 4699999999999999999999996 999998654
No 14
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=98.96 E-value=4e-10 Score=80.90 Aligned_cols=45 Identities=36% Similarity=0.829 Sum_probs=38.1
Q ss_pred ccccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCCCCC
Q 018965 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPL 321 (348)
Q Consensus 269 ~~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~~~~ 321 (348)
....|.+ |++. .+++|++|+.++|||++||+.||+. ||.+|..+.
T Consensus 16 ~~~~C~~--C~~~-----~~~~Cs~C~~~~YCs~~CQ~~~W~~-Hk~~C~~~~ 60 (64)
T 2odd_A 16 SSESCWN--CGRK-----ASETCSGCNTARYCGSFCQHKDWEK-HHHICGQTL 60 (64)
T ss_dssp CSSSCTT--TSSC-----CCEEETTTSCCEESSHHHHHHHHHH-HTTTTTSSC
T ss_pred CCCcCcc--ccCC-----CcccCCCCCChhhCCHHHHHHHHHH-HhHHHhccc
Confidence 4567885 7763 4699999999999999999999996 999998654
No 15
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.95 E-value=5.3e-10 Score=76.79 Aligned_cols=43 Identities=44% Similarity=0.954 Sum_probs=35.3
Q ss_pred ccccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCCC
Q 018965 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVP 319 (348)
Q Consensus 269 ~~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~~ 319 (348)
....|.+ |++. .+++|++|+.+.|||++||+.||+. ||.+|.+
T Consensus 8 ~~~~C~~--C~~~-----~~~~C~~C~~~~YCs~~CQ~~~W~~-Hk~~C~~ 50 (52)
T 2jw6_A 8 KEQSCVN--CGRE-----AMSECTGCHKVNYCSTFCQRKDWKD-HQHICGQ 50 (52)
T ss_dssp ---CCSS--SSSS-----CSEECTTTCSSEESSHHHHHHHTTT-GGGTTTC
T ss_pred cCCcCCC--CCCC-----CcCcCCCCCCEeecCHHHHHHHHHH-HCHHHcc
Confidence 3457875 7764 4699999999999999999999996 9999975
No 16
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.31 E-value=5.3e-06 Score=86.42 Aligned_cols=118 Identities=16% Similarity=0.092 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|++|.+. .+++++++||.+|. ..++.++|+..|++|.+. +++.+.++||.+|.. .| ++++|
T Consensus 25 ~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~-~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g------~~~~A 96 (723)
T 4gyw_A 25 IEEAVRLYRKALEVFPEFAAAHSNLASVLQ-QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQ------DVQGA 96 (723)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC------CHHHH
Confidence 56777777776664 46777777777776 456677777777777654 466777777777753 22 56777
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC--CHHHHHh
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE--FFQSVSK 210 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G--~~~A~~~ 210 (348)
++.|++|.+. .++.+.++||.+|.. ..++++|+.+|++|.+.. ++.+..+
T Consensus 97 ~~~~~kAl~l~P~~~~a~~~Lg~~~~~----~g~~~eAi~~~~~Al~l~P~~~~a~~~ 150 (723)
T 4gyw_A 97 LQCYTRAIQINPAFADAHSNLASIHKD----SGNIPEAIASYRTALKLKPDFPDAYCN 150 (723)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCChHHHhh
Confidence 7777777653 567777777776664 346777777777776543 3444443
No 17
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.31 E-value=2.4e-05 Score=68.37 Aligned_cols=118 Identities=13% Similarity=0.019 Sum_probs=98.3
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhcc-----------CCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccC
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCL-----------QNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGS 144 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~-----------~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~ 144 (348)
..++|+..|+++.+. .++.+.+.||.+|. .. ++.++|+..|++|.+. +++.+.+.||.+|.. .
T Consensus 54 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~-~ 131 (217)
T 2pl2_A 54 LVNPALENGKTLVARTPRYLGGYMVLSEAYV-ALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYAL-L 131 (217)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-c
Confidence 378999999998875 58999999999998 44 7899999999999875 589999999999964 3
Q ss_pred CCCCCccCHHHHHHHHHHHHhC-CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC--CHHHHH
Q 018965 145 GGGKNEKDLRAGVALCARAASI-GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE--FFQSVS 209 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~~-G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G--~~~A~~ 209 (348)
| ++++|+.+|++|.+. .++.+.++||.+|.. ..+.++|+.+|++|.+.. ++.+..
T Consensus 132 g------~~~~A~~~~~~al~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~P~~~~~~~ 189 (217)
T 2pl2_A 132 G------ERDKAEASLKQALALEDTPEIRSALAELYLS----MGRLDEALAQYAKALEQAPKDLDLRV 189 (217)
T ss_dssp T------CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred C------ChHHHHHHHHHHHhcccchHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 3 789999999998754 689999999999876 358999999999998753 444444
No 18
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.30 E-value=2.3e-06 Score=70.68 Aligned_cols=116 Identities=7% Similarity=-0.019 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHCC--CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFAG--NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G--~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+..|+++.... ++.+.|.||.+|+ ..+++++|+++|++|.+. .++.+.+.||.+|.. .| ++++|
T Consensus 13 ~e~ai~~~~~a~~~~p~~~~~~~~la~~y~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~------~~~~A 84 (150)
T 4ga2_A 13 VERYIASVQGSTPSPRQKSIKGFYFAKLYY-EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EE------NTDKA 84 (150)
T ss_dssp HHHHHHHHHHHSCSHHHHHTTHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHhcccCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC------chHHH
Confidence 688999999987653 4567899999998 678999999999999876 589999999999974 23 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCH-HHHHHHHHHHHhc--CCHHHH
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNI-EKGRRLLIEANAR--EFFQSV 208 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~-~~A~~w~~~Aa~~--G~~~A~ 208 (348)
+..|++|.+. .++++.++||.+|..- .+. +.+..|+++|.+. +++.+.
T Consensus 85 ~~~~~~al~~~p~~~~~~~~la~~~~~~----~~~~~aa~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 85 VECYRRSVELNPTQKDLVLKIAELLCKN----DVTDGRAKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHH----CSSSSHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHc----CChHHHHHHHHHHHHHhCcCCHHHH
Confidence 9999999875 6899999999988752 233 3455677888764 444443
No 19
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.27 E-value=1.2e-05 Score=70.30 Aligned_cols=124 Identities=15% Similarity=0.016 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccC-CCCCC---ccC
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGS-GGGKN---EKD 152 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~-g~~~~---~~d 152 (348)
.++|+..|+++.+. +++++.+.+|.++. ..++.++|+.+|+++.+. .++.+.+.||.+|..-. ....+ ..+
T Consensus 21 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~ 99 (217)
T 2pl2_A 21 YDAALTLFERALKENPQDPEALYWLARTQL-KLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGY 99 (217)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccC
Confidence 78999999999876 69999999999998 678899999999999865 47899999999996420 00000 047
Q ss_pred HHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC-CHHHHH
Q 018965 153 LRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE-FFQSVS 209 (348)
Q Consensus 153 ~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G-~~~A~~ 209 (348)
+++|+..|++|.+. .++.+.+.||.+|.. ..+.++|+.+|++|.+.. ++.+..
T Consensus 100 ~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~ 155 (217)
T 2pl2_A 100 LEQALSVLKDAERVNPRYAPLHLQRGLVYAL----LGERDKAEASLKQALALEDTPEIRS 155 (217)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHH----cCChHHHHHHHHHHHhcccchHHHH
Confidence 89999999999874 689999999999876 568999999999998764 444444
No 20
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.24 E-value=6.6e-06 Score=68.64 Aligned_cols=99 Identities=11% Similarity=0.066 Sum_probs=83.3
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDA 171 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A 171 (348)
++++.|.+|..++ ..+++++|+.+|+++.+. .++.+.++||.+|.. .| ++++|+..|++|.+. .++.+
T Consensus 35 ~~~~~~~lg~~~~-~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~-~g------~~~~Ai~~~~~al~l~P~~~~~ 106 (151)
T 3gyz_A 35 MMDDIYSYAYDFY-NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQI-KE------QFQQAADLYAVAFALGKNDYTP 106 (151)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-Hc------cHHHHHHHHHHHHhhCCCCcHH
Confidence 5668899998887 678999999999999876 589999999999964 33 789999999999864 68999
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCHH
Q 018965 172 VRELGHCLQDGYGVRQNIEKGRRLLIEANAREFFQ 206 (348)
Q Consensus 172 ~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~~ 206 (348)
.++||.+|.. ..++++|+..|++|.+.....
T Consensus 107 ~~~lg~~~~~----lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 107 VFHTGQCQLR----LKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCH
Confidence 9999999876 458999999999998765433
No 21
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.23 E-value=0.00011 Score=61.32 Aligned_cols=117 Identities=19% Similarity=0.268 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+..++++... .++.+.+.+|.++. ...+.+.+..++.++.+. .++.+.+.+|.+|.. . .++++|
T Consensus 55 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~-~------g~~~~A 126 (184)
T 3vtx_A 55 PNDAIESLKKFVVLDTTSAEAYYILGSANF-MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDS-M------GEHDKA 126 (184)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T------TCHHHH
T ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-h------CCchhH
Confidence 77889999888664 57888999998887 677899999999998865 478899999999964 2 378999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCHHHHH
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFFQSVS 209 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~~A~~ 209 (348)
+..|+++.+. .++.+.++||.+|.. ..+.++|+.+|++|.+.....+..
T Consensus 127 ~~~~~~~l~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~a~~ 177 (184)
T 3vtx_A 127 IEAYEKTISIKPGFIRAYQSIGLAYEG----KGLRDEAVKYFKKALEKEEKKAKY 177 (184)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHhcchhhhHHHHHHHHHHH----CCCHHHHHHHHHHHHhCCccCHHH
Confidence 9999999874 689999999999986 568999999999999876555543
No 22
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.21 E-value=1.5e-05 Score=63.75 Aligned_cols=101 Identities=11% Similarity=0.056 Sum_probs=74.0
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHH
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAV 172 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~ 172 (348)
+++..++|..|+ ..+++++|+.+|++|.+. .++.+.+++|.+|.. .| ++.+|+..|++|.+. .++.+.
T Consensus 13 a~~~~~~G~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~------~~~~A~~~~~~al~~~p~~~~a~ 84 (126)
T 4gco_A 13 AQEEKNKGNEYF-KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LM------EFQRALDDCDTCIRLDSKFIKGY 84 (126)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hc------cHHHHHHHHHHHHHhhhhhhHHH
Confidence 345667787777 677888888888888765 467888888888863 23 678888888888763 578888
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHHHhc--CCHHHHH
Q 018965 173 RELGHCLQDGYGVRQNIEKGRRLLIEANAR--EFFQSVS 209 (348)
Q Consensus 173 ~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~--G~~~A~~ 209 (348)
+++|.+|.. ..++++|+.+|++|.+. .+..|+.
T Consensus 85 ~~lg~~~~~----~~~~~~A~~~~~~al~l~P~~~~a~~ 119 (126)
T 4gco_A 85 IRKAACLVA----MREWSKAQRAYEDALQVDPSNEEARE 119 (126)
T ss_dssp HHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHH----CCCHHHHHHHHHHHHHHCcCCHHHHH
Confidence 888888765 45788888888888765 3444444
No 23
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.18 E-value=1.7e-05 Score=67.87 Aligned_cols=111 Identities=10% Similarity=0.131 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVA 158 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~ 158 (348)
.++|+..|+++.+ .++.+.+.+|.+|. ..++.++|+.+|++|.+. .++.+.+++|.+|.. .| ++++|+.
T Consensus 22 ~~~A~~~~~~a~~-~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~------~~~~A~~ 92 (213)
T 1hh8_A 22 WKGALDAFSAVQD-PHSRICFNIGCMYT-ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TE------KYDLAIK 92 (213)
T ss_dssp HHHHHHHHHTSSS-CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHH
T ss_pred HHHHHHHHHHHcC-CChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cc------cHHHHHH
Confidence 7899999999864 48999999999998 678999999999999875 588999999999974 33 7899999
Q ss_pred HHHHHHhCC------------------CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 159 LCARAASIG------------------HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 159 ~~~kAA~~G------------------~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
+|+++.+.. .+.+.+++|.+|.. ..+.++|+.+|++|.+...
T Consensus 93 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~p 152 (213)
T 1hh8_A 93 DLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK----KEEWKKAEEQLALATSMKS 152 (213)
T ss_dssp HHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH----ccCHHHHHHHHHHHHHcCc
Confidence 999999853 23899999999876 4599999999999987654
No 24
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.14 E-value=7.9e-07 Score=87.18 Aligned_cols=49 Identities=29% Similarity=0.653 Sum_probs=40.5
Q ss_pred ccccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCCCCCCC
Q 018965 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPLAP 323 (348)
Q Consensus 269 ~~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~~~~~~ 323 (348)
....|.+ |.+.. ..+.+|++|+.+.|||++||+.||+. ||.+|..++.+
T Consensus 48 ~~~~C~~--C~~~~---~~~~~C~~C~~~~yCs~~Cq~~~w~~-Hk~eC~~l~~~ 96 (433)
T 3qww_A 48 RGHHCEC--CFARK---EGLSKCGRCKQAFYCDVECQKEDWPL-HKLECSSMVVL 96 (433)
T ss_dssp TTTBCTT--TCCBC---SSCEECTTTSCCEESSHHHHHHHHHH-HTTTHHHHHHS
T ss_pred cCCcCCc--ccccC---CCCCCCCCCcceeecChhhhhhhhhH-HHHHHHHHHHh
Confidence 4567885 76643 36799999999999999999999986 99999877654
No 25
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.10 E-value=1.4e-05 Score=66.80 Aligned_cols=112 Identities=15% Similarity=0.095 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHH-HHccCCCCCCccCH--
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVI-QFNGSGGGKNEKDL-- 153 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~-y~~G~g~~~~~~d~-- 153 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+ |.. .| ++
T Consensus 26 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~-~~------~~~~ 97 (177)
T 2e2e_A 26 PEAQLQALQDKIRANPQNSEQWALLGEYYL-WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQ-AS------QHMT 97 (177)
T ss_dssp -CCCCHHHHHHHHHCCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH-TT------TCCC
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-cC------Ccch
Confidence 56788888888765 58999999999998 678999999999999875 589999999999 532 33 44
Q ss_pred HHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 154 RAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 154 ~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
.+|..+|+++.+. .++.+.+.||.+|.. ..+.++|+.+|+++.+...
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p 146 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASDAFM----QANYAQAIELWQKVMDLNS 146 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cccHHHHHHHHHHHHhhCC
Confidence 8999999999874 679999999999876 4699999999999987654
No 26
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.08 E-value=2e-05 Score=63.04 Aligned_cols=93 Identities=16% Similarity=0.219 Sum_probs=77.5
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCC--C----
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIG--H---- 168 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G--~---- 168 (348)
+.+..+||..++ ..+++++|+.+|++|.+. .++.+.+++|.+|.. .| ++++|+.+|++|.+.. +
T Consensus 8 A~a~~~lG~~~~-~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~------~~~~A~~~~~~al~~~~~~~~~~ 79 (127)
T 4gcn_A 8 AIAEKDLGNAAY-KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EK------KFAECVQFCEKAVEVGRETRADY 79 (127)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hh------hHHHHHHHHHHHHHhCcccchhh
Confidence 456778999988 678999999999999875 578999999999974 33 7899999999998742 1
Q ss_pred ---HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 169 ---VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 169 ---~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
..+.++||.+|.. ..++++|+.+|++|..
T Consensus 80 ~~~a~~~~~lg~~~~~----~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 80 KLIAKAMSRAGNAFQK----QNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHh
Confidence 3578889998875 5699999999999975
No 27
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.08 E-value=1.2e-06 Score=85.85 Aligned_cols=49 Identities=35% Similarity=0.673 Sum_probs=40.3
Q ss_pred ccccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCCCCCCC
Q 018965 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPLAP 323 (348)
Q Consensus 269 ~~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~~~~~~ 323 (348)
....|.+ |.+.. ..+.+|++|+.+.|||++||+.||+. ||.+|..++.+
T Consensus 46 ~~~~C~~--C~~~~---~~~~~C~~C~~~~yCs~~Cq~~~w~~-Hk~eC~~~~~~ 94 (429)
T 3qwp_A 46 RGVVCDR--CLLGK---EKLMRCSQCRVAKYCSAKCQKKAWPD-HKRECKCLKSC 94 (429)
T ss_dssp BTTBCTT--TCCBC---SSCEECTTTSCCEESSHHHHHHTHHH-HHHHHHHHHHT
T ss_pred CCCcCcC--CCCcC---CCCCcCCCCCCcccCChhhhhhhhhh-hHHhhhhHHhc
Confidence 4557885 76542 26789999999999999999999995 99999877655
No 28
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.08 E-value=6.6e-05 Score=62.79 Aligned_cols=111 Identities=21% Similarity=0.191 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++++.+.||.+|. ..++.++|+.+++++.... ++.+.+.+|.++.. ..+..++
T Consensus 21 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~a 92 (184)
T 3vtx_A 21 FDGAIRAYKKVLKADPNNVETLLKLGKTYM-DIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFM-------IDEKQAA 92 (184)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-------TTCHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH-------cCCHHHH
Confidence 78999999999886 68999999999998 6778999999999997654 78899999998864 3478999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
...+.++.+. .+..+.+.+|.+|.. ..+.++|+..|+++.+..
T Consensus 93 ~~~~~~a~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~~l~~~ 137 (184)
T 3vtx_A 93 IDALQRAIALNTVYADAYYKLGLVYDS----MGEHDKAIEAYEKTISIK 137 (184)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCccchHHHHHHHHHHHH----hCCchhHHHHHHHHHHhc
Confidence 9999999864 689999999999876 568999999999998764
No 29
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.07 E-value=4.4e-05 Score=67.44 Aligned_cols=110 Identities=11% Similarity=0.039 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHC------CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccC
Q 018965 81 SDSAHRFLKRCVFA------GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKD 152 (348)
Q Consensus 81 ~~~A~~~~~kaA~~------G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d 152 (348)
.++|+..|+++.+. +++.+.+.+|.+|. ..++.++|+.+|+++.+.. ++.+.+.||.+|.. .| +
T Consensus 21 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~------~ 92 (275)
T 1xnf_A 21 QEVILARMEQILASRALTDDERAQLLYERGVLYD-SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AG------N 92 (275)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TT------C
T ss_pred HHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH-HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-cc------C
Confidence 45566666665553 23455556665555 4455566666666655433 45566666665542 12 4
Q ss_pred HHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 153 LRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 153 ~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+++|+.+|+++.+. .++.+.+.+|.+|.. ..++++|+.+|+++.+.
T Consensus 93 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 93 FDAAYEAFDSVLELDPTYNYAHLNRGIALYY----GGRDKLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccHHHHHHHHHHHH----hccHHHHHHHHHHHHHh
Confidence 55666666665552 345566666665544 33556666666665543
No 30
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.07 E-value=0.00014 Score=55.98 Aligned_cols=110 Identities=17% Similarity=0.225 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|..+|+++.+. .++.+.+.+|.++. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. ..++++|
T Consensus 17 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~A 88 (136)
T 2fo7_A 17 YDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-------QGDYDEA 88 (136)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-------TTCHHHH
T ss_pred HHHHHHHHHHHHHcCCcchhHHHHHHHHHH-HhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-------hcCHHHH
Confidence 78999999998764 57889999999987 567999999999999875 467889999999863 2378999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
..+|+++.+. .+..+.+.+|.+|.. ..+.++|..+|+++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 89 IEYYQKALELDPRSAEAWYNLGNAYYK----QGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHH----HccHHHHHHHHHHHHcc
Confidence 9999999875 468899999998875 56899999999998753
No 31
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.06 E-value=7.9e-05 Score=64.68 Aligned_cols=114 Identities=15% Similarity=0.043 Sum_probs=96.8
Q ss_pred cHHHHHHHHHHHHHC---CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHH
Q 018965 80 WSDSAHRFLKRCVFA---GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLR 154 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~---G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~ 154 (348)
..++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|++|.+.. ++.+.+.+|.+|.. . .++.
T Consensus 22 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~------~~~~ 93 (228)
T 4i17_A 22 NYAVAFEKYSEYLKLTNNQDSVTAYNCGVCAD-NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-M------KNNQ 93 (228)
T ss_dssp CHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-T------TCHH
T ss_pred CHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH-HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-c------ccHH
Confidence 378999999999885 57889999999998 6789999999999999875 68899999999964 2 3789
Q ss_pred HHHHHHHHHHhC--CCH-------HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCH
Q 018965 155 AGVALCARAASI--GHV-------DAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFF 205 (348)
Q Consensus 155 ~A~~~~~kAA~~--G~~-------~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~ 205 (348)
+|+.+|+++.+. .++ .+.+.+|.+|.. ..+.++|+.+|++|.+....
T Consensus 94 ~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 94 EYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQ----AGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHH----hccHHHHHHHHHHHHhcCCC
Confidence 999999999875 456 568888888865 56999999999999988655
No 32
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.06 E-value=5.3e-05 Score=78.88 Aligned_cols=111 Identities=20% Similarity=0.139 Sum_probs=94.6
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+..|++|.+. +++++.++||.+|. ..++.++|++.|++|.+. +++.|.++||.+|.. .| ++++
T Consensus 58 ~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~-~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~-~g------~~~e 129 (723)
T 4gyw_A 58 KLQEALMHYKEAIRISPTFADAYSNMGNTLK-EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD-SG------NIPE 129 (723)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC------CHHH
Confidence 388999999999875 68999999999998 678999999999999875 589999999999964 33 7899
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
|+.+|++|.+. .++.+.++||.+|.. ..|.++|...|+++.+.
T Consensus 130 Ai~~~~~Al~l~P~~~~a~~~L~~~l~~----~g~~~~A~~~~~kal~l 174 (723)
T 4gyw_A 130 AIASYRTALKLKPDFPDAYCNLAHCLQI----VCDWTDYDERMKKLVSI 174 (723)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHHHHHHHH----TTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCChHHHhhhhhHHHh----cccHHHHHHHHHHHHHh
Confidence 99999999875 689999999999875 34667777777777653
No 33
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.06 E-value=3e-05 Score=62.76 Aligned_cols=95 Identities=14% Similarity=0.162 Sum_probs=80.2
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDA 171 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A 171 (348)
++++.+.+|..++ ..+++++|+.+|+++.... ++.+.+.||.+|.. .| ++++|+.+|++|.+. .++.+
T Consensus 17 ~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g------~~~~A~~~~~~al~~~p~~~~~ 88 (142)
T 2xcb_A 17 TLEQLYALGFNQY-QAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LG------LYEQALQSYSYGALMDINEPRF 88 (142)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCTHH
T ss_pred HHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-Hh------hHHHHHHHHHHHHhcCCCCcHH
Confidence 4567888888887 6789999999999998664 78999999999964 33 789999999999875 68899
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 172 VRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 172 ~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.+++|.+|.. ..++++|+.+|+++.+.
T Consensus 89 ~~~lg~~~~~----~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 89 PFHAAECHLQ----LGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 9999999876 56899999999999764
No 34
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.06 E-value=2.9e-05 Score=63.84 Aligned_cols=103 Identities=11% Similarity=0.103 Sum_probs=84.8
Q ss_pred HHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHH
Q 018965 88 LKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARA 163 (348)
Q Consensus 88 ~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kA 163 (348)
|+++.+. .++++.+.+|..++ ..+++.+|+..|+++.+. .++.+.+.||.+|.. .| ++++|+.+|++|
T Consensus 10 ~~~al~~~p~~~~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g------~~~~A~~~~~~a 81 (148)
T 2vgx_A 10 IAMLNEISSDTLEQLYSLAFNQY-QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQA-MG------QYDLAIHSYSYG 81 (148)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHH
T ss_pred HHHHHcCCHhhHHHHHHHHHHHH-HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHH-Hh------hHHHHHHHHHHH
Confidence 4444433 35678899999988 678999999999999765 589999999999963 33 789999999999
Q ss_pred HhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 164 ASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 164 A~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
... .++.+.++||.+|.. ..+.++|+.+|++|.+.
T Consensus 82 l~l~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 82 AVMDIXEPRFPFHAAECLLQ----XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHSTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HhcCCCCchHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 864 689999999999875 56899999999999764
No 35
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.02 E-value=4.3e-05 Score=63.15 Aligned_cols=95 Identities=14% Similarity=0.046 Sum_probs=79.0
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDA 171 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A 171 (348)
++++.+.+|.+|+ ..+++++|+.+|++|.+. .++.+.+++|.+|.. .| ++.+|+.+|+++.+. .++.+
T Consensus 10 ~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g------~~~~A~~~~~~al~~~p~~~~~ 81 (164)
T 3sz7_A 10 ESDKLKSEGNAAM-ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SG------QHEKAAEDAELATVVDPKYSKA 81 (164)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-cc------CHHHHHHHHHHHHHhCCCCHHH
Confidence 4567888888887 678999999999999875 478899999999864 23 789999999999874 67899
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 172 VRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 172 ~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.++||.+|.. ..++++|+.+|+++.+.
T Consensus 82 ~~~lg~~~~~----~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 82 WSRLGLARFD----MADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----ccCHHHHHHHHHHHHHh
Confidence 9999998876 46899999999998754
No 36
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.02 E-value=3.8e-05 Score=61.39 Aligned_cols=92 Identities=11% Similarity=-0.024 Sum_probs=80.5
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+..|++|.+. .++.+.+++|.+|. ..++.++|+..|++|.+. .++.+.+++|.+|.. .| ++++
T Consensus 28 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~------~~~~ 99 (126)
T 4gco_A 28 DYPTAMRHYNEAVKRDPENAILYSNRAACLT-KLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA-MR------EWSK 99 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHhhHHH-hhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-CC------CHHH
Confidence 378999999999875 68999999999998 678999999999999875 589999999999964 33 7899
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHH
Q 018965 156 GVALCARAASI--GHVDAVRELGHCL 179 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y 179 (348)
|+++|++|.+. .+.++...|+.++
T Consensus 100 A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 100 AQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999875 7899999998864
No 37
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.99 E-value=2.2e-06 Score=85.26 Aligned_cols=49 Identities=31% Similarity=0.682 Sum_probs=40.0
Q ss_pred ccccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCCCCCCC
Q 018965 269 GLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPLAP 323 (348)
Q Consensus 269 ~~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~~~~~~ 323 (348)
....|.+ |.+.. ..+.+|++|+.+.|||++||+.||+. ||.+|..++.+
T Consensus 48 ~~~~C~~--C~~~~---~~~~~C~~C~~~~yCs~~Cq~~~w~~-Hk~eC~~~~~~ 96 (490)
T 3n71_A 48 INFVCHT--CFKRQ---EKLHRCGQCKFAHYCDRTCQKDAWLN-HKNECAAIKKY 96 (490)
T ss_dssp TTTBCTT--TCCBC---SCCEECTTTSCCEESSHHHHHHHHHH-HHHHHHHHHHH
T ss_pred cCCcCCC--CCCCC---CCCCCCCCCCCcCcCCHHHhhhhhhH-HHHHhHHHHhc
Confidence 4557885 66532 35799999999999999999999995 99999877654
No 38
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.99 E-value=8.7e-05 Score=58.24 Aligned_cols=95 Identities=13% Similarity=0.074 Sum_probs=79.1
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHH
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAV 172 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~ 172 (348)
+++.+.+|..++ ..+++++|+.+|++|.+. .++.+.+++|.+|.. . .++.+|+.+|+++.+. .++.+.
T Consensus 4 a~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~------~~~~~A~~~~~~al~~~p~~~~~~ 75 (126)
T 3upv_A 4 AEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-L------MSFPEAIADCNKAIEKDPNFVRAY 75 (126)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-h------cCHHHHHHHHHHHHHhCCCcHHHH
Confidence 467788888887 678999999999999875 478999999999974 2 3789999999999874 678999
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 173 RELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 173 ~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
+.+|.+|.. ..+.++|+.+|+++.+..
T Consensus 76 ~~lg~~~~~----~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 76 IRKATAQIA----VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHH----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HhCHHHHHHHHHHHHHhC
Confidence 999998876 458999999999998754
No 39
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.96 E-value=5.2e-05 Score=67.50 Aligned_cols=118 Identities=13% Similarity=0.010 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHC--CC---HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC-----CCHHHHHHHHHHHHcc-CCCCCC
Q 018965 81 SDSAHRFLKRCVFA--GN---LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK-----SHAPALYSLAVIQFNG-SGGGKN 149 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~---~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~-----G~~~A~~~Lg~~y~~G-~g~~~~ 149 (348)
.++|+..|+++.+. ++ +++.+.||.+|+ ..+++++|+.+|+++.+. ..+.+.|.+|.+|... ......
T Consensus 31 ~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~ 109 (261)
T 3qky_A 31 YDRAIEYFKAVFTYGRTHEWAADAQFYLARAYY-QNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELD 109 (261)
T ss_dssp HHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSC
T ss_pred HHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccccc
Confidence 78999999999886 46 899999999998 678999999999999986 3378999999999752 110001
Q ss_pred ccCHHHHHHHHHHHHhC--CCHHHH-----------------HHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 150 EKDLRAGVALCARAASI--GHVDAV-----------------RELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 150 ~~d~~~A~~~~~kAA~~--G~~~A~-----------------~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
..++.+|+.+|+++.+. .++.+. +.+|.+|.. ..++++|+..|+++.+..
T Consensus 110 ~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~l~~~ 178 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYER----RELYEAAAVTYEAVFDAY 178 (261)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHC
Confidence 34789999999999874 333333 889998876 569999999999998753
No 40
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.96 E-value=0.00018 Score=58.99 Aligned_cols=110 Identities=17% Similarity=0.182 Sum_probs=91.6
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|..+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++
T Consensus 57 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~------~~~~ 128 (186)
T 3as5_A 57 AVDRGTELLERSLADAPDNVKVATVLGLTYV-QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDN-LG------RFDE 128 (186)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHH
T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH-cC------cHHH
Confidence 378999999998775 57889999999887 677899999999998775 578899999998864 33 7899
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
|..+|+++.+. .++.+.+.+|.+|.. ..+.++|..+|+++.+
T Consensus 129 A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~ 172 (186)
T 3as5_A 129 AIDSFKIALGLRPNEGKVHRAIAFSYEQ----MGRHEEALPHFKKANE 172 (186)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccchHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 99999998875 578899999998875 4589999999999865
No 41
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.96 E-value=8.5e-05 Score=57.81 Aligned_cols=95 Identities=9% Similarity=0.035 Sum_probs=66.7
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDA 171 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A 171 (348)
++.+++.+|..+. ..++.++|+.+|+++.+.. ++.+.+.+|.+|.. ..++++|+.+|+++.+. .++.+
T Consensus 15 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-------~~~~~~A~~~~~~a~~~~~~~~~~ 86 (133)
T 2lni_A 15 LALMVKNKGNECF-QKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTK-------LLEFQLALKDCEECIQLEPTFIKG 86 (133)
T ss_dssp HHHHHHHHHHHHH-HTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTT-------TTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-------hccHHHHHHHHHHHHHhCCCchHH
Confidence 4566777777776 5667777888888777653 67777778877742 23677788888777764 46777
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 172 VRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 172 ~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.+.+|.+|.. ..+.++|+.+|+++.+.
T Consensus 87 ~~~la~~~~~----~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 87 YTRKAAALEA----MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----HhhHHHHHHHHHHHHHh
Confidence 7778877764 34777888888777654
No 42
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.96 E-value=0.00016 Score=62.52 Aligned_cols=115 Identities=15% Similarity=0.032 Sum_probs=88.5
Q ss_pred CcHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHc-cCCCCCCccCH
Q 018965 79 NWSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFN-GSGGGKNEKDL 153 (348)
Q Consensus 79 ~~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~-G~g~~~~~~d~ 153 (348)
...++|+.+|+++.+. .++++.+.||.+|. ..++.++|+.+|+++.+. +++.+.++||.+|.. |. .+.
T Consensus 68 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~------~~~ 140 (208)
T 3urz_A 68 RNYDKAYLFYKELLQKAPNNVDCLEACAEMQV-CRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE------QEK 140 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH------HHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH------HHH
Confidence 3489999999999876 58999999999998 678999999999999875 589999999999853 32 356
Q ss_pred HHHHHHHHHHHhCCC-HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 154 RAGVALCARAASIGH-VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 154 ~~A~~~~~kAA~~G~-~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
.++...|.++..... ..+.|++|..+.. ..++++|+.+|++|.+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 141 KKLETDYKKLSSPTKMQYARYRDGLSKLF----TTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHHHHHC---CCCHHHHHHHHHHHHHHH----HHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHhCCCchhHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCC
Confidence 677778877765432 2367788876654 3588999999999987543
No 43
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.95 E-value=5.4e-05 Score=74.48 Aligned_cols=126 Identities=13% Similarity=0.062 Sum_probs=102.4
Q ss_pred H-HHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC-CHHHHHHHHHHHHc-cCCCCCCc----c
Q 018965 81 S-DSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS-HAPALYSLAVIQFN-GSGGGKNE----K 151 (348)
Q Consensus 81 ~-~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G-~~~A~~~Lg~~y~~-G~g~~~~~----~ 151 (348)
. ++|..+|+++.+. .++++.+.||.+|. ..+++++|+.+|++|.+.. ++.++++||.+|.. +.+ .. .
T Consensus 118 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~---~~~~~~g 193 (474)
T 4abn_A 118 YSPEAEVLLSKAVKLEPELVEAWNQLGEVYW-KKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTD---SGDEHSR 193 (474)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCS---CHHHHHH
T ss_pred cHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccC---Chhhhhh
Confidence 5 8999999999775 57999999999998 6789999999999999865 47899999999976 333 33 6
Q ss_pred CHHHHHHHHHHHHhC--CCHHHHHHHHHHHhcc---CC-CCCCHHHHHHHHHHHHhc-----CCHHHHHh
Q 018965 152 DLRAGVALCARAASI--GHVDAVRELGHCLQDG---YG-VRQNIEKGRRLLIEANAR-----EFFQSVSK 210 (348)
Q Consensus 152 d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G---~G-v~~d~~~A~~w~~~Aa~~-----G~~~A~~~ 210 (348)
++++|+.+|++|.+. .++.+.++||.+|..- .| -..++++|+.+|++|.+. .++.+..+
T Consensus 194 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 263 (474)
T 4abn_A 194 HVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLN 263 (474)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHH
Confidence 789999999999875 6899999999988641 11 225899999999999885 45555554
No 44
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.94 E-value=0.00014 Score=71.43 Aligned_cols=124 Identities=15% Similarity=0.067 Sum_probs=100.7
Q ss_pred cHHHHHHHHHHHHHCC-CHHHHHHhhhhhhhcc---------CCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcc---C
Q 018965 80 WSDSAHRFLKRCVFAG-NLEACYTLGMIRFYCL---------QNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNG---S 144 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G-~~~A~~~Lg~~y~~~~---------~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G---~ 144 (348)
..++|..+|+++.+.. ++.+++.||.+|. .. ++.++|+.+|++|.+. .++.++++||.+|..- .
T Consensus 152 ~~~~A~~~~~~al~~~p~~~~~~~lg~~~~-~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~ 230 (474)
T 4abn_A 152 DVTSAHTCFSGALTHCKNKVSLQNLSMVLR-QLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNT 230 (474)
T ss_dssp CHHHHHHHHHHHHTTCCCHHHHHHHHHHHT-TCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhhCCCHHHHHHHHHHHH-HhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhh
Confidence 3889999999998864 5789999999988 44 7899999999999876 5789999999999642 1
Q ss_pred CCCCCccCHHHHHHHHHHHHhC-----CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc--CCHHHHHh
Q 018965 145 GGGKNEKDLRAGVALCARAASI-----GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR--EFFQSVSK 210 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~~-----G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~--G~~~A~~~ 210 (348)
|. ...++++|+.+|++|.+. .++.+.++||.+|.. ..++++|+.+|++|.+. +++.+...
T Consensus 231 ~~--~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l~p~~~~a~~~ 297 (474)
T 4abn_A 231 GQ--NPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKY----EESYGEALEGFSQAAALDPAWPEPQQR 297 (474)
T ss_dssp TC--CHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cc--ccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 20 235899999999999873 689999999999986 46999999999999765 34444443
No 45
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.94 E-value=0.00012 Score=57.87 Aligned_cols=97 Identities=16% Similarity=0.141 Sum_probs=82.2
Q ss_pred CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCH
Q 018965 94 AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHV 169 (348)
Q Consensus 94 ~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~ 169 (348)
..++.+.+.+|..++ ..+++++|+.+|+++.+. .++.+.+.+|.+|.. ..++.+|+.+|+++.+. .++
T Consensus 6 ~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-------~~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 6 SPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-------MQQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-------TTCHHHHHHHHHHHHHHCTTCH
T ss_pred cccHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHhCchhH
Confidence 357888999999988 678999999999999875 478899999999974 23789999999999864 678
Q ss_pred HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 170 DAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 170 ~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.+.+.||.+|.. ..+..+|+.+|++|.+.
T Consensus 78 ~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 78 KAHFFLGQCQLE----MESYDEAIANLQRAYSL 106 (137)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HhhHHHHHHHHHHHHHH
Confidence 999999999876 45899999999999864
No 46
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.94 E-value=0.00049 Score=58.33 Aligned_cols=111 Identities=13% Similarity=0.095 Sum_probs=92.8
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhcc-CCHHHHHHHHHHHHhC----CCHHHHHHHHHHHHccCCCCCCccC
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCL-QNRSSGTSLMAKAAMK----SHAPALYSLAVIQFNGSGGGKNEKD 152 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~-~d~~~A~~~~~~AA~~----G~~~A~~~Lg~~y~~G~g~~~~~~d 152 (348)
..++|..+|+++.+. .++.+.+.+|.+|. .. ++.++|+.+|+++.+. .++.+.+.+|.+|.. .| +
T Consensus 57 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~------~ 128 (225)
T 2vq2_A 57 VNDKAQESFRQALSIKPDSAEINNNYGWFLC-GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAK-QG------Q 128 (225)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHH-TT------C
T ss_pred ChHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHH-cC------C
Confidence 378999999998875 47889999999988 56 8999999999999882 236889999999864 23 7
Q ss_pred HHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 153 LRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 153 ~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+++|+.+|+++.+. .++.+.+.||.+|.. ..+.++|..+|+++.+.
T Consensus 129 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 129 FGLAEAYLKRSLAAQPQFPPAFKELARTKML----AGQLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCchHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 89999999999874 578999999998875 45899999999998775
No 47
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.92 E-value=0.00026 Score=60.14 Aligned_cols=112 Identities=13% Similarity=-0.004 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+.. ++.+.+.+|.+|..-.| ++++|
T Consensus 24 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~------~~~~A 96 (225)
T 2vq2_A 24 YRQATASIEDALKSDPKNELAWLVRAEIYQ-YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLN------RPAES 96 (225)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC------CHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcC------cHHHH
Confidence 78999999998875 57899999999998 6779999999999998754 78899999999964213 89999
Q ss_pred HHHHHHHHhC----CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 157 VALCARAASI----GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 157 ~~~~~kAA~~----G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
+.+|+++.+. .+..+.+.+|.+|.. ..+.++|+.+|+++.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~ 143 (225)
T 2vq2_A 97 MAYFDKALADPTYPTPYIANLNKGICSAK----QGQFGLAEAYLKRSLAAQ 143 (225)
T ss_dssp HHHHHHHHTSTTCSCHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCcCCcchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 9999999982 337899999999876 468999999999998754
No 48
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.92 E-value=0.00032 Score=60.55 Aligned_cols=112 Identities=21% Similarity=0.258 Sum_probs=89.7
Q ss_pred cHHHHHHHHHHHHHCC--CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFAG--NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G--~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|..+|+++.+.. ++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. ..++++
T Consensus 106 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~ 177 (243)
T 2q7f_A 106 MYKEAKDMFEKALRAGMENGDLFYMLGTVLV-KLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN-------EGMLDE 177 (243)
T ss_dssp CHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-------HTCCHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-------cCCHHH
Confidence 3788999999887754 7888899998887 667889999999998875 478888899988864 225688
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
|..+|+++.+. .++.+.+.+|.+|.. ..|.++|..+|+++.+..
T Consensus 178 A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~ 223 (243)
T 2q7f_A 178 ALSQFAAVTEQDPGHADAFYNAGVTYAY----KENREKALEMLDKAIDIQ 223 (243)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHH----ccCHHHHHHHHHHHHccC
Confidence 99999988764 568888999988875 457888999999887653
No 49
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.92 E-value=6.6e-05 Score=56.45 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=77.6
Q ss_pred CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--C--C
Q 018965 95 GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--G--H 168 (348)
Q Consensus 95 G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G--~ 168 (348)
+++.+.+.+|.++. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. . .++++|+.+|+++.+. . +
T Consensus 4 ~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~------~~~~~A~~~~~~a~~~~~~~~~ 75 (112)
T 2kck_A 4 QNPEEYYLEGVLQY-DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-L------ERYEEAVDCYNYVINVIEDEYN 75 (112)
T ss_dssp SSTTGGGGHHHHHH-SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHTSCCTTC
T ss_pred CcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-c------cCHHHHHHHHHHHHHhCcccch
Confidence 45667788888887 677899999999998875 478889999998864 2 3689999999999875 4 7
Q ss_pred HHHHHHHHHHHhccCCCC-CCHHHHHHHHHHHHhcC
Q 018965 169 VDAVRELGHCLQDGYGVR-QNIEKGRRLLIEANARE 203 (348)
Q Consensus 169 ~~A~~~Lg~~y~~G~Gv~-~d~~~A~~w~~~Aa~~G 203 (348)
..+.+.+|.+|.. . .+.++|+.+|+++....
T Consensus 76 ~~~~~~l~~~~~~----~~~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 76 KDVWAAKADALRY----IEGKEVEAEIAEARAKLEH 107 (112)
T ss_dssp HHHHHHHHHHHTT----CSSCSHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHH----HhCCHHHHHHHHHHHhhcc
Confidence 8899999998875 4 58889999999887543
No 50
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.87 E-value=0.00015 Score=67.41 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHCC----CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHH
Q 018965 81 SDSAHRFLKRCVFAG----NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLR 154 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G----~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~ 154 (348)
.++|..+|+++.+.. ++.+.+.||.+|. ..++.++|+.+|+++.+. .++.+.+.||.+|.. .| +++
T Consensus 193 ~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g------~~~ 264 (365)
T 4eqf_A 193 LEGVKELYLEAAHQNGDMIDPDLQTGLGVLFH-LSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN-GD------RSE 264 (365)
T ss_dssp HHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHH
T ss_pred HHHHHHHHHHHHHhCcCccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC------CHH
Confidence 789999999998864 7899999999998 678999999999999875 578999999999975 33 789
Q ss_pred HHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 155 AGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 155 ~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+|+.+|+++.+. .++.+.+.||.+|.. ..++++|+.+|++|.+.
T Consensus 265 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 310 (365)
T 4eqf_A 265 EAVEAYTRALEIQPGFIRSRYNLGISCIN----LGAYREAVSNFLTALSL 310 (365)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHH----CCCHHHHHHHHHHHHHh
Confidence 999999999874 679999999999875 35889999999999763
No 51
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.86 E-value=0.0002 Score=62.59 Aligned_cols=112 Identities=7% Similarity=0.055 Sum_probs=87.3
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHh----CCCHHHHHHHHHHHHccCCCCCCccCH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAM----KSHAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~----~G~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
..++|..+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+ ..++.+.+.+|.+|.. .| ++
T Consensus 86 ~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g------~~ 157 (252)
T 2ho1_A 86 EPKLADEEYRKALASDSRNARVLNNYGGFLY-EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQ-MK------KP 157 (252)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHH-TT------CH
T ss_pred CHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHH-cC------CH
Confidence 378888888888765 57888888888887 56788889999988876 3456788888888864 23 67
Q ss_pred HHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 154 RAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 154 ~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
++|..+|+++.+. .++.+.+.||.+|.. ..+.++|..+|+++.+..
T Consensus 158 ~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~~ 205 (252)
T 2ho1_A 158 AQAKEYFEKSLRLNRNQPSVALEMADLLYK----EREYVPARQYYDLFAQGG 205 (252)
T ss_dssp HHHHHHHHHHHHHCSCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 8888888888764 468888888888765 458888998888887654
No 52
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.85 E-value=0.00024 Score=53.70 Aligned_cols=96 Identities=9% Similarity=0.034 Sum_probs=71.3
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDA 171 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A 171 (348)
.+++.+.+|..++ ..++.++|+.+|+++.+. .++.+.+.+|.+|.. ..++.+|..+|+++.+. .++.+
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-------~~~~~~A~~~~~~~~~~~~~~~~~ 74 (118)
T 1elw_A 3 QVNELKEKGNKAL-SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-------KGDYQKAYEDGCKTVDLKPDWGKG 74 (118)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-------HTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-------hccHHHHHHHHHHHHHhCcccHHH
Confidence 3566777787776 567888888888888665 467888888888763 23678888888888764 46778
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 172 VRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 172 ~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
.+.+|.+|.. ..+.++|..+|+++.+..
T Consensus 75 ~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 75 YSRKAAALEF----LNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH----HhhHHHHHHHHHHHHHcC
Confidence 8888887765 347888888888887654
No 53
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.85 E-value=0.00078 Score=58.70 Aligned_cols=112 Identities=6% Similarity=0.009 Sum_probs=95.2
Q ss_pred cHHHHHHHHHHHHH----CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCH
Q 018965 80 WSDSAHRFLKRCVF----AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 80 ~~~~A~~~~~kaA~----~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
..++|..+|+++.+ ..++.+.+.+|.+|. ..++.++|+.+|+++.+.. ++.+.+.||.+|.. . .++
T Consensus 120 ~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~------g~~ 191 (252)
T 2ho1_A 120 RYEEAYQRLLEASQDTLYPERSRVFENLGLVSL-QMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYK-E------REY 191 (252)
T ss_dssp CHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-T------TCH
T ss_pred HHHHHHHHHHHHHhCccCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-c------CCH
Confidence 38899999999977 346789999999988 6789999999999998754 78999999999964 2 378
Q ss_pred HHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 154 RAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 154 ~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
++|..+|+++.+. .+..+.+.++.+|.. ..|.++|..+|+++.+..
T Consensus 192 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~~~~~~ 239 (252)
T 2ho1_A 192 VPARQYYDLFAQGGGQNARSLLLGIRLAKV----FEDRDTAASYGLQLKRLY 239 (252)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCcCcHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHC
Confidence 9999999999875 578899999998875 459999999999997754
No 54
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.84 E-value=0.00017 Score=62.58 Aligned_cols=100 Identities=12% Similarity=-0.012 Sum_probs=85.5
Q ss_pred HHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC---CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--
Q 018965 92 VFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK---SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI-- 166 (348)
Q Consensus 92 A~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~---G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~-- 166 (348)
+...++++.+.+|..|+ ..+++++|+.+|+++.+. .+..+.+.+|.+|.. . .++++|+.+|++|.+.
T Consensus 2 a~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~------~~~~~A~~~~~~al~~~p 73 (228)
T 4i17_A 2 AQTTDPNQLKNEGNDAL-NAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-I------KKYKEAADYFDIAIKKNY 73 (228)
T ss_dssp --CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHTTC
T ss_pred ccccCHHHHHHHHHHHH-HccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-h------hcHHHHHHHHHHHHHhCc
Confidence 44568899999999998 678999999999999985 468899999999974 2 3799999999999986
Q ss_pred CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 167 GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 167 G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
.++.+.+.+|.+|.. ..+.++|+.+|+++.+..
T Consensus 74 ~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~ 106 (228)
T 4i17_A 74 NLANAYIGKSAAYRD----MKNNQEYIATLTEGIKAV 106 (228)
T ss_dssp SHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHH----cccHHHHHHHHHHHHHHC
Confidence 478899999999976 469999999999998754
No 55
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.84 E-value=0.00012 Score=56.47 Aligned_cols=96 Identities=15% Similarity=0.172 Sum_probs=80.4
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCC--C----
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIG--H---- 168 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G--~---- 168 (348)
+++.+.+|..+. ..++.++|+.+|+++.+.. ++.+.+.+|.+|.. ..++++|+.+|+++.+.. +
T Consensus 4 ~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-------~~~~~~A~~~~~~~~~~~~~~~~~~ 75 (131)
T 1elr_A 4 ALKEKELGNDAY-KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-------KGDYNKCRELCEKAIEVGRENREDY 75 (131)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-------HTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-------hccHHHHHHHHHHHHhhccccchhH
Confidence 467888999887 6789999999999998764 78899999999964 237899999999998753 3
Q ss_pred ---HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 169 ---VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 169 ---~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
+.+.+.+|.+|.. ..+.++|..+|+++.+...
T Consensus 76 ~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 76 RQIAKAYARIGNSYFK----EEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhCC
Confidence 7899999999876 4689999999999988643
No 56
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.84 E-value=0.00025 Score=56.28 Aligned_cols=97 Identities=14% Similarity=0.078 Sum_probs=77.2
Q ss_pred CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--C
Q 018965 95 GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSH-----APALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--G 167 (348)
Q Consensus 95 G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~-----~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G 167 (348)
.++.+++.+|..++ ..+++++|+.+|+++.+... ..+.+.+|.+|.. . .++++|+.+|+++.+. .
T Consensus 26 ~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~------~~~~~A~~~~~~~~~~~~~ 97 (148)
T 2dba_A 26 SSVEQLRKEGNELF-KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-L------EDYDKAETEASKAIEKDGG 97 (148)
T ss_dssp CCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-H------ccHHHHHHHHHHHHhhCcc
Confidence 46777888888887 67789999999999987653 6788889988864 2 3788999999988764 5
Q ss_pred CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 168 HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 168 ~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
++.+.+.+|.+|.. ..+.++|+.+|+++.+..
T Consensus 98 ~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 98 DVKALYRRSQALEK----LGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcC
Confidence 78889999988875 458899999999887653
No 57
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.81 E-value=0.00037 Score=57.11 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|..+|+++.+. .++++.+.||.+|. ..++.++|+..|++|.+. .++.+.++||.+|..-.- ..+.+
T Consensus 47 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~------~~~aa 119 (150)
T 4ga2_A 47 YDLAKKYICTYINVQERDPKAHRFLGLLYE-LEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDV------TDGRA 119 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCS------SSSHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC------hHHHH
Confidence 78999999999875 69999999999998 678999999999999976 489999999999864211 22344
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHh
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQ 180 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~ 180 (348)
..|+++|.+. +++.+....+.++.
T Consensus 120 ~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 120 KYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 5567888764 78888877777764
No 58
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.80 E-value=0.00014 Score=56.80 Aligned_cols=94 Identities=13% Similarity=0.142 Sum_probs=74.7
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCH---HHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CC-
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHA---PALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GH- 168 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~---~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~- 168 (348)
+++.|.+|..++ ..+++++|+..|+++.+. +++ .+.+.+|.+|.. . .++++|+.+|+++.+. .+
T Consensus 2 ~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~------~~~~~A~~~~~~~~~~~p~~~ 73 (129)
T 2xev_A 2 ARTAYNVAFDAL-KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-T------RNFQLAEAQFRDLVSRYPTHD 73 (129)
T ss_dssp -CCHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHHCTTST
T ss_pred cHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-h------ccHHHHHHHHHHHHHHCCCCc
Confidence 345778888877 677899999999998874 355 789999998864 2 3789999999998874 45
Q ss_pred --HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 169 --VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 169 --~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+.+.+.+|.+|.. ..+.++|+.+|+++.+.
T Consensus 74 ~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 74 KAAGGLLKLGLSQYG----EGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp THHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 7889999998875 45899999999998865
No 59
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.79 E-value=0.00021 Score=58.46 Aligned_cols=111 Identities=14% Similarity=0.126 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. ..++++|
T Consensus 24 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-------~~~~~~A 95 (186)
T 3as5_A 24 YSQAVMLLEQVYDADAFDVDVALHLGIAYV-KTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ-------VQKYDLA 95 (186)
T ss_dssp HHHHHHHHTTTCCTTSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-------HTCHHHH
T ss_pred HHHHHHHHHHHHHhCccChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-------hcCHHHH
Confidence 67889999987765 57899999999998 678999999999999876 578899999999864 2378999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
..+|+++.+. .++.+.+.+|.+|.. ..+.++|..+|+++.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 140 (186)
T 3as5_A 96 VPLLIKVAEANPINFNVRFRLGVALDN----LGRFDEAIDSFKIALGLR 140 (186)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCcHhHHHHHHHHHHHHH----cCcHHHHHHHHHHHHhcC
Confidence 9999999864 688999999998875 568999999999998764
No 60
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.79 E-value=0.00014 Score=62.87 Aligned_cols=109 Identities=13% Similarity=0.098 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHH----------------hhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYT----------------LGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQ 140 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~----------------Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y 140 (348)
.++|+.+|+++.+. .++++.+. ||.+|. ..+++++|+.+|+++.+. .++.+.+.||.+|
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 98 (208)
T 3urz_A 20 NGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYK-KNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQ 98 (208)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 78999999998876 46788888 999998 678999999999999876 4899999999999
Q ss_pred HccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHh-ccCCCCCCHHHHHHHHHHHH
Q 018965 141 FNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQ-DGYGVRQNIEKGRRLLIEAN 200 (348)
Q Consensus 141 ~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~-~G~Gv~~d~~~A~~w~~~Aa 200 (348)
.. ..++++|+.+|+++.+. .++.+.++||.+|. .|. .+...+...|+++.
T Consensus 99 ~~-------~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~---~~~~~~~~~~~~~~ 151 (208)
T 3urz_A 99 VC-------RGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE---QEKKKLETDYKKLS 151 (208)
T ss_dssp HH-------HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH---HHHHHHHHHHC---
T ss_pred HH-------cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHh
Confidence 74 23789999999999874 78999999999874 331 23445555555554
No 61
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.78 E-value=0.00025 Score=62.60 Aligned_cols=111 Identities=11% Similarity=0.047 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHCC-C----HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCH
Q 018965 81 SDSAHRFLKRCVFAG-N----LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G-~----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
.++|+.+|+++.+.. + +.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++
T Consensus 53 ~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~------~~ 124 (272)
T 3u4t_A 53 YDLAQKDIETYFSKVNATKAKSADFEYYGKILM-KKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYN-KG------NF 124 (272)
T ss_dssp HHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TT------CH
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-cc------CH
Confidence 778888888888743 1 445788888887 567888888888888775 467888888888864 23 78
Q ss_pred HHHHHHHHHHHhC--CCHHHHHHHH-HHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 154 RAGVALCARAASI--GHVDAVRELG-HCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 154 ~~A~~~~~kAA~~--G~~~A~~~Lg-~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
++|+.+|+++.+. .++.+.+.+| .+|..+ +.++|+..|+++.+...
T Consensus 125 ~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~-----~~~~A~~~~~~a~~~~p 173 (272)
T 3u4t_A 125 PLAIQYMEKQIRPTTTDPKVFYELGQAYYYNK-----EYVKADSSFVKVLELKP 173 (272)
T ss_dssp HHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHhCc
Confidence 8888888888764 5788888888 788766 88888888888876543
No 62
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.78 E-value=0.0012 Score=59.56 Aligned_cols=112 Identities=12% Similarity=0.041 Sum_probs=93.0
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+..|+++.+. ++..+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. . .++++
T Consensus 140 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~------~~~~~ 211 (330)
T 3hym_B 140 EHDQAMAAYFTAAQLMKGCHLPMLYIGLEYG-LTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ-N------GEWKT 211 (330)
T ss_dssp CHHHHHHHHHHHHHHTTTCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-T------TCHHH
T ss_pred CHHHHHHHHHHHHHhccccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-c------ccHHH
Confidence 378999999998875 46788999999988 677899999999999876 478899999999864 2 37899
Q ss_pred HHHHHHHHHh-----------CCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 156 GVALCARAAS-----------IGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 156 A~~~~~kAA~-----------~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
|..+|+++.+ ..++.+.+.||.+|.. ..+.++|+.+|+++.+..
T Consensus 212 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 212 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK----LKKYAEALDYHRQALVLI 266 (330)
T ss_dssp HHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhC
Confidence 9999999987 4557899999998875 458999999999998754
No 63
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.78 E-value=0.00029 Score=53.64 Aligned_cols=94 Identities=19% Similarity=0.268 Sum_probs=65.9
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHH
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAV 172 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~ 172 (348)
+.+.+.+|.++. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++|+.+|+++.+. .++.+.
T Consensus 9 ~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~------~~~~A~~~~~~~~~~~~~~~~~~ 80 (125)
T 1na0_A 9 AEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QG------DYDEAIEYYQKALELDPNNAEAW 80 (125)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-hC------CHHHHHHHHHHHHHhCCccHHHH
Confidence 566777777776 566777888888777654 357777777777753 22 677788888777654 467777
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 173 RELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 173 ~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+.+|.+|.. ..+.++|..+|+++.+.
T Consensus 81 ~~la~~~~~----~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 81 YNLGNAYYK----QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----hcCHHHHHHHHHHHHHh
Confidence 777777764 34777888888777654
No 64
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.77 E-value=0.001 Score=61.50 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC-------------------------------
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK------------------------------- 127 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~------------------------------- 127 (348)
.++|+.+|+++.+. .++.+.+.||.+|. ..++.++|+.+|+++.+.
T Consensus 115 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 193 (365)
T 4eqf_A 115 EQAAIVALQRCLELQPNNLKALMALAVSYT-NTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVL 193 (365)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-ccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhH
Confidence 67777777777664 46777777777766 344555566555555442
Q ss_pred -------------C----CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCC
Q 018965 128 -------------S----HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQN 188 (348)
Q Consensus 128 -------------G----~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d 188 (348)
. ++.+.+.||.+|.. ..++++|+.+|+++.+. .++.+.+.||.+|.. ..+
T Consensus 194 ~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~-------~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~ 262 (365)
T 4eqf_A 194 EGVKELYLEAAHQNGDMIDPDLQTGLGVLFHL-------SGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN----GDR 262 (365)
T ss_dssp HHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH-------HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTC
T ss_pred HHHHHHHHHHHHhCcCccCHHHHHHHHHHHHH-------CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCC
Confidence 2 56777788877753 23678888888887764 567788888887775 457
Q ss_pred HHHHHHHHHHHHhc
Q 018965 189 IEKGRRLLIEANAR 202 (348)
Q Consensus 189 ~~~A~~w~~~Aa~~ 202 (348)
+++|+.+|++|.+.
T Consensus 263 ~~~A~~~~~~al~~ 276 (365)
T 4eqf_A 263 SEEAVEAYTRALEI 276 (365)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 88888888888765
No 65
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.77 E-value=0.00025 Score=64.67 Aligned_cols=112 Identities=10% Similarity=-0.069 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHC----CC----HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFA----GN----LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G~----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G~ 144 (348)
.++|+..|++|.+. |+ +.+..++|.+|. ..+++++|+.+|++|.+. |+ +.+..+||.+|..-.
T Consensus 53 ~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~l 131 (292)
T 1qqe_A 53 LNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFK-SGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDL 131 (292)
T ss_dssp THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh
Confidence 67888999988775 55 468899999998 567999999999999854 55 458889999997522
Q ss_pred CCCCCccCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 145 GGGKNEKDLRAGVALCARAASI----GH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~~----G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
| ++++|+.+|++|.+. |+ ..+..+||.+|.. ..++.+|+.+|+++.+..
T Consensus 132 g------~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 132 H------DYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL----DGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp C------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTT
T ss_pred c------CHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHH
Confidence 4 789999999999863 33 4578899998876 458999999999998753
No 66
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.76 E-value=0.00017 Score=72.05 Aligned_cols=116 Identities=17% Similarity=0.125 Sum_probs=98.8
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|...|+++.+. .++.+.+.||.+|. ..++.++|+.+|++|.+. +++.+.++||.+|.. .| ++++
T Consensus 38 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g------~~~~ 109 (568)
T 2vsy_A 38 DTTAGEMAVQRGLALHPGHPEAVARLGRVRW-TQQRHAEAAVLLQQASDAAPEHPGIALWLGHALED-AG------QAEA 109 (568)
T ss_dssp CHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cC------CHHH
Confidence 388999999999886 57899999999998 678899999999999875 578999999999964 23 7899
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
|.++|+++.+. .++.+.++||.+|..- +--.+.++|...|+++.+.+.
T Consensus 110 A~~~~~~al~~~p~~~~~~~~l~~~~~~~-~~~g~~~~A~~~~~~al~~~p 159 (568)
T 2vsy_A 110 AAAAYTRAHQLLPEEPYITAQLLNWRRRL-CDWRALDVLSAQVRAAVAQGV 159 (568)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCCTTHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHh-hccccHHHHHHHHHHHHhcCC
Confidence 99999999875 6899999999998761 112589999999999998864
No 67
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.75 E-value=0.00034 Score=60.31 Aligned_cols=112 Identities=13% Similarity=0.229 Sum_probs=93.3
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+..|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+.. ++.+.+.+|.+|.. .| ++++
T Consensus 72 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~------~~~~ 143 (243)
T 2q7f_A 72 ELERALAFYDKALELDSSAATAYYGAGNVYV-VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK-LE------QPKL 143 (243)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH-TS------CHHH
T ss_pred CHHHHHHHHHHHHHcCCcchHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hc------cHHH
Confidence 378999999998875 47899999999988 6778999999999988764 78899999999864 23 7899
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
|..+|+++.+. .++.+.+.+|.+|.. ..+.++|+.+|+++.+..
T Consensus 144 A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~ 189 (243)
T 2q7f_A 144 ALPYLQRAVELNENDTEARFQFGMCLAN----EGMLDEALSQFAAVTEQD 189 (243)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 99999998864 578899999998865 447889999999988764
No 68
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.74 E-value=0.00015 Score=57.38 Aligned_cols=90 Identities=13% Similarity=0.057 Sum_probs=61.8
Q ss_pred HHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHH
Q 018965 101 YTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELG 176 (348)
Q Consensus 101 ~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg 176 (348)
+.+|..++ ..++.++|+..|++|.+. .++.+.+.||.+|.. .| ++.+|+..|++|.+. .++.+.+.||
T Consensus 21 ~~~g~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g------~~~~A~~~~~~al~l~P~~~~~~~~la 92 (121)
T 1hxi_A 21 MEEGLSML-KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NE------KDGLAIIALNHARMLDPKDIAVHAALA 92 (121)
T ss_dssp HHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cC------CHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 44555555 456777788888777754 477788888877753 23 577788888887764 5677888888
Q ss_pred HHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 177 HCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 177 ~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.+|.. ..+.++|+.+|+++.+.
T Consensus 93 ~~~~~----~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 93 VSHTN----EHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHC-
T ss_pred HHHHH----cCCHHHHHHHHHHHHHh
Confidence 77764 34677788887777653
No 69
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.72 E-value=0.00036 Score=69.68 Aligned_cols=91 Identities=14% Similarity=-0.008 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|..+|+++.+. .++.+.+.||.+|. ..++.++|+++|+++.+. +++.+.++||.+|..- + .-.+.++|
T Consensus 73 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-~---~~g~~~~A 147 (568)
T 2vsy_A 73 HAEAAVLLQQASDAAPEHPGIALWLGHALE-DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRL-C---DWRALDVL 147 (568)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-T---CCTTHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-h---ccccHHHH
Confidence 77888888887764 56788888888877 567788888888888765 4677888888887642 1 11378888
Q ss_pred HHHHHHHHhCC--CHHHHHHHH
Q 018965 157 VALCARAASIG--HVDAVRELG 176 (348)
Q Consensus 157 ~~~~~kAA~~G--~~~A~~~Lg 176 (348)
.+.|+++.+.+ +..+.+.|+
T Consensus 148 ~~~~~~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 148 SAQVRAAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp HHHHHHHHHHTCCCSCHHHHTT
T ss_pred HHHHHHHHhcCCcccChHHHhC
Confidence 88888887653 445555554
No 70
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.71 E-value=0.00054 Score=61.74 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=99.2
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHh-----------CCCHHHHHHHHHHHHccCCC
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAM-----------KSHAPALYSLAVIQFNGSGG 146 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~-----------~G~~~A~~~Lg~~y~~G~g~ 146 (348)
..++|..+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+ ..++.+.+.||.+|.. .|
T Consensus 174 ~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g- 250 (330)
T 3hym_B 174 NSKLAERFFSQALSIAPEDPFVMHEVGVVAF-QNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-LK- 250 (330)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH-TT-
T ss_pred hHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH-hc-
Confidence 378999999999886 57899999999998 67899999999999998 5567899999999964 23
Q ss_pred CCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC--CHHHHH
Q 018965 147 GKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE--FFQSVS 209 (348)
Q Consensus 147 ~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G--~~~A~~ 209 (348)
++++|+.+|+++.+. .++.+.+.||.+|.. ..+.++|..+|+++.+.. ++.+..
T Consensus 251 -----~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~ 308 (330)
T 3hym_B 251 -----KYAEALDYHRQALVLIPQNASTYSAIGYIHSL----MGNFENAVDYFHTALGLRRDDTFSVT 308 (330)
T ss_dssp -----CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH----HTCHHHHHHHHHTTTTTCSCCHHHHH
T ss_pred -----CHHHHHHHHHHHHhhCccchHHHHHHHHHHHH----hccHHHHHHHHHHHHccCCCchHHHH
Confidence 789999999999864 578999999999876 458999999999997654 444444
No 71
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.71 E-value=8.4e-05 Score=68.40 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHC----CC----HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFA----GN----LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G~----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G~ 144 (348)
.++|...|.++++. |+ ..+..++|.+|. ...++++|+.+|++|.+. |+ ..+..+||.+|..
T Consensus 52 ~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-- 128 (307)
T 2ifu_A 52 LEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLK-DLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-- 128 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc--
Confidence 67888888887764 34 457888888887 556889999999998754 44 4578899999965
Q ss_pred CCCCCccCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 145 GGGKNEKDLRAGVALCARAASI----GH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~~----G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
| ++++|+.+|++|.+. |+ ..+..+||.+|.. ..++.+|+.+|++|.+
T Consensus 129 g------~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 183 (307)
T 2ifu_A 129 L------DLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR----QQKFDEAAASLQKEKS 183 (307)
T ss_dssp T------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred C------CHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 5 789999999999863 43 5678899998875 4589999999999986
No 72
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.71 E-value=0.00015 Score=68.25 Aligned_cols=110 Identities=12% Similarity=0.067 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHC---------CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHcc
Q 018965 81 SDSAHRFLKRCVFA---------GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNG 143 (348)
Q Consensus 81 ~~~A~~~~~kaA~~---------G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G 143 (348)
.++|+.++++|.+. +...+.+.||.+|. ..+++++|+.+|++|.+. ++ ..+.++||.+|..
T Consensus 159 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~- 236 (383)
T 3ulq_A 159 TYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL-DLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNS- 236 (383)
T ss_dssp HHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH-
Confidence 78999999998763 23568899999998 678999999999999854 33 3588999999964
Q ss_pred CCCCCCccCHHHHHHHHHHHHh--------CCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 144 SGGGKNEKDLRAGVALCARAAS--------IGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 144 ~g~~~~~~d~~~A~~~~~kAA~--------~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.| ++++|..+|++|.+ .+.+.+.++||.+|.. ..+.++|..+|++|.+.
T Consensus 237 ~g------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 293 (383)
T 3ulq_A 237 QS------QYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYK----LGKIDKAHEYHSKGMAY 293 (383)
T ss_dssp TT------CHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred CC------CHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHH
Confidence 23 79999999999988 3457899999999875 45899999999999764
No 73
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.71 E-value=0.0031 Score=55.25 Aligned_cols=109 Identities=9% Similarity=-0.074 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+.+.||.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++|
T Consensus 59 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~g------~~~~A 130 (275)
T 1xnf_A 59 RALARNDFSQALAIRPDMPEVFNYLGIYLT-QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY-GG------RDKLA 130 (275)
T ss_dssp HHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH-hc------cHHHH
Confidence 78999999999875 47999999999998 677999999999999985 478999999999965 33 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+.+|+++.+. .+......++..+.. .+.++|..+|+++...
T Consensus 131 ~~~~~~a~~~~~~~~~~~~~~~~~~~~-----~~~~~A~~~~~~~~~~ 173 (275)
T 1xnf_A 131 QDDLLAFYQDDPNDPFRSLWLYLAEQK-----LDEKQAKEVLKQHFEK 173 (275)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH-----HCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHh-----cCHHHHHHHHHHHHhc
Confidence 9999999874 456566666665554 3788999999887764
No 74
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.70 E-value=0.00029 Score=57.89 Aligned_cols=96 Identities=11% Similarity=0.042 Sum_probs=77.5
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--------------------CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--------------------SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--------------------G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
+.+...+|..++ ..+++.+|+.+|++|.+. .++.+.+++|.+|.. ..++.+|
T Consensus 11 a~~~~~~G~~~~-~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-------~~~~~~A 82 (162)
T 3rkv_A 11 VEALRQKGNELF-VQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-------IGDLHEA 82 (162)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-------HTCHHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-------cCcHHHH
Confidence 456677788777 677889999999998875 345789999999964 2378999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
+.+|.+|.+. .++.+.+.+|.+|.. ..++++|+.+|++|.+...
T Consensus 83 ~~~~~~al~~~p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~p 128 (162)
T 3rkv_A 83 EETSSEVLKREETNEKALFRRAKARIA----AWKLDEAEEDLKLLLRNHP 128 (162)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHH----HhcHHHHHHHHHHHHhcCC
Confidence 9999999864 689999999998875 4589999999999987643
No 75
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.70 E-value=0.00042 Score=60.10 Aligned_cols=96 Identities=13% Similarity=0.068 Sum_probs=80.9
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDA 171 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A 171 (348)
++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++|+.+|+++.+. .++.+
T Consensus 138 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~------~~~~A~~~~~~al~~~~~~~~~ 209 (258)
T 3uq3_A 138 KAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LM------SFPEAIADCNKAIEKDPNFVRA 209 (258)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-hC------CHHHHHHHHHHHHHhCHHHHHH
Confidence 4678888998887 678999999999999875 468899999999964 23 789999999999864 67899
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 172 VRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 172 ~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
.+.+|.+|.. ..+.++|..+|++|.+..
T Consensus 210 ~~~l~~~~~~----~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 210 YIRKATAQIA----VKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----HhhHHHHHHHHHHHHHhC
Confidence 9999999876 468999999999998654
No 76
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.70 E-value=0.0007 Score=62.36 Aligned_cols=110 Identities=14% Similarity=0.044 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHCC----CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHH
Q 018965 81 SDSAHRFLKRCVFAG----NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLR 154 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G----~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~ 154 (348)
.++|+.+|+++.+.. ++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++.
T Consensus 197 ~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g------~~~ 268 (368)
T 1fch_A 197 FLEVKELFLAAVRLDPTSIDPDVQCGLGVLFN-LSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLAN-GN------QSE 268 (368)
T ss_dssp HHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHH
T ss_pred HHHHHHHHHHHHHhCcCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-cC------CHH
Confidence 689999999988754 5789999999998 678999999999999875 478899999999964 33 789
Q ss_pred HHHHHHHHHHh--CCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 155 AGVALCARAAS--IGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 155 ~A~~~~~kAA~--~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+|+.+|+++.+ ..++.+.+.||.+|.. ..++++|+.+|++|.+.
T Consensus 269 ~A~~~~~~al~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 314 (368)
T 1fch_A 269 EAVAAYRRALELQPGYIRSRYNLGISCIN----LGAHREAVEHFLEALNM 314 (368)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHh
Confidence 99999999986 4679999999999876 45899999999999763
No 77
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.68 E-value=0.0002 Score=52.13 Aligned_cols=77 Identities=22% Similarity=0.319 Sum_probs=64.4
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDA 171 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A 171 (348)
++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. . .++++|+.+|+++.+. +++.+
T Consensus 8 ~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~------~~~~~A~~~~~~a~~~~p~~~~~ 79 (91)
T 1na3_A 8 SAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-Q------GDYDEAIEYYQKALELDPNNAEA 79 (91)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-H------hhHHHHHHHHHHHHhcCCCCHHH
Confidence 4678888998887 678999999999999875 578899999999864 2 3789999999999875 68899
Q ss_pred HHHHHHHHh
Q 018965 172 VRELGHCLQ 180 (348)
Q Consensus 172 ~~~Lg~~y~ 180 (348)
.+.||.+|.
T Consensus 80 ~~~l~~~~~ 88 (91)
T 1na3_A 80 KQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 78
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.68 E-value=0.00014 Score=69.89 Aligned_cols=111 Identities=7% Similarity=-0.038 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+..|+++.+. .++.+.+.+|.++....+|.++|+.+|++|.+.. ++.+.+++|.+|..- | ++.+|
T Consensus 113 ~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~-g------~~~eA 185 (382)
T 2h6f_A 113 SERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL-R------DPSQE 185 (382)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-T------CCTTH
T ss_pred hHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-c------CHHHH
Confidence 45666777766654 4666777777766633334677777777766543 566777777666431 2 44566
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+..|++|.+. .+..+.+++|.+|.. ..+.++|+.+|++|.+.
T Consensus 186 l~~~~kal~ldP~~~~a~~~lg~~~~~----~g~~~eAl~~~~~al~l 229 (382)
T 2h6f_A 186 LEFIADILNQDAKNYHAWQHRQWVIQE----FKLWDNELQYVDQLLKE 229 (382)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCccCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHh
Confidence 6666666643 466666666666544 12445566666666554
No 79
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.67 E-value=0.00018 Score=74.19 Aligned_cols=118 Identities=13% Similarity=-0.008 Sum_probs=97.8
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+..|+++.+. .++++.+.+|.+|. ..+++++|+..|++|.+. +++.+.++||.+|..- | ++++
T Consensus 448 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~-g------~~~~ 519 (681)
T 2pzi_A 448 DVAKATRKLDDLAERVGWRWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGELAPKLALAATAELA-G------NTDE 519 (681)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHH-T------CCCT
T ss_pred CHHHHHHHHHHHhccCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHc-C------ChHH
Confidence 388999999998874 79999999999998 678999999999999875 5899999999999642 2 4456
Q ss_pred HHHHHHHHHh--CCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC--HHHHHh
Q 018965 156 GVALCARAAS--IGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF--FQSVSK 210 (348)
Q Consensus 156 A~~~~~kAA~--~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~--~~A~~~ 210 (348)
+.+|++|.+ -.++.+.++||.+|.. ..++++|+.+|++|.+..- ..|..+
T Consensus 520 -~~~~~~al~~~P~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~P~~~~a~~~ 573 (681)
T 2pzi_A 520 -HKFYQTVWSTNDGVISAAFGLARARSA----EGDRVGAVRTLDEVPPTSRHFTTARLT 573 (681)
T ss_dssp -TCHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHTSCTTSTTHHHHHHH
T ss_pred -HHHHHHHHHhCCchHHHHHHHHHHHHH----cCCHHHHHHHHHhhcccCcccHHHHHH
Confidence 788999876 4789999999999876 5589999999999987654 444443
No 80
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.67 E-value=0.0027 Score=58.30 Aligned_cols=111 Identities=17% Similarity=0.096 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC------------------------------
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS------------------------------ 128 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G------------------------------ 128 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+..
T Consensus 114 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (368)
T 1fch_A 114 ELLAISALRRCLELKPDNQTALMALAVSFT-NESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL 192 (368)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh
Confidence 77888888888775 47888888888876 4556666666666655432
Q ss_pred -----------------------CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccC
Q 018965 129 -----------------------HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGY 183 (348)
Q Consensus 129 -----------------------~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~ 183 (348)
++.+.+.||.+|.. .| ++++|+.+|+++.+. .++.+.+.+|.+|..
T Consensus 193 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~-~g------~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-- 263 (368)
T 1fch_A 193 SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNL-SG------EYDKAVDCFTAALSVRPNDYLLWNKLGATLAN-- 263 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH--
T ss_pred hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHH-cC------CHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH--
Confidence 56788888888864 23 788999999998764 568889999988876
Q ss_pred CCCCCHHHHHHHHHHHHhcC
Q 018965 184 GVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 184 Gv~~d~~~A~~w~~~Aa~~G 203 (348)
..++++|+.+|+++.+..
T Consensus 264 --~g~~~~A~~~~~~al~~~ 281 (368)
T 1fch_A 264 --GNQSEEAVAAYRRALELQ 281 (368)
T ss_dssp --TTCHHHHHHHHHHHHHHC
T ss_pred --cCCHHHHHHHHHHHHHhC
Confidence 458899999999987653
No 81
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.67 E-value=0.0005 Score=52.76 Aligned_cols=96 Identities=18% Similarity=0.118 Sum_probs=63.2
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDA 171 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A 171 (348)
++.+.+.+|..+. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. . .++++|..+|+++.+. .++.+
T Consensus 11 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~------~~~~~A~~~~~~~~~~~~~~~~~ 82 (131)
T 2vyi_A 11 EAERLKTEGNEQM-KVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSK-L------GNYAGAVQDCERAICIDPAYSKA 82 (131)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hhHHHHHHHHHHH-HccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-h------hchHHHHHHHHHHHhcCccCHHH
Confidence 3455666666666 456777777777777654 356777777777753 2 2567777777777653 45677
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 172 VRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 172 ~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
.+.+|.+|.. ..+.++|+.+|+++.+..
T Consensus 83 ~~~~~~~~~~----~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 83 YGRMGLALSS----LNKHVEAVAYYKKALELD 110 (131)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHH----hCCHHHHHHHHHHHHhcC
Confidence 7777776654 346777777777776543
No 82
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.66 E-value=0.0011 Score=57.93 Aligned_cols=110 Identities=17% Similarity=0.141 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHC----------CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----------CCHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA----------GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----------SHAPALYSLAVIQ 140 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----------G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----------G~~~A~~~Lg~~y 140 (348)
.++|..+|+++.+. ..+.+.+.||.+|. ..++.++|+.+|++|.+. ....+.++||.+|
T Consensus 59 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 137 (283)
T 3edt_B 59 YKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLC 137 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 67888888888765 23568899999988 678999999999999876 2467889999999
Q ss_pred HccCCCCCCccCHHHHHHHHHHHHhC--------C--CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 141 FNGSGGGKNEKDLRAGVALCARAASI--------G--HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 141 ~~G~g~~~~~~d~~~A~~~~~kAA~~--------G--~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.. .| ++++|..+|+++.+. . ...+.+.||.+|.. ..+.++|+.+|+++.+.
T Consensus 138 ~~-~g------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 138 QN-QG------KAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK----QGKYQDAETLYKEILTR 198 (283)
T ss_dssp HT-TT------CHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HH-cC------CHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 64 23 789999999999875 1 35688899998875 45899999999999863
No 83
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.66 E-value=0.00058 Score=51.93 Aligned_cols=92 Identities=23% Similarity=0.344 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|..+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++|
T Consensus 25 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~------~~~~A 96 (125)
T 1na0_A 25 YDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QG------DYDEA 96 (125)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hc------CHHHH
Confidence 78999999998875 57899999999988 568999999999999876 578899999999964 23 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHh
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQ 180 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~ 180 (348)
..+|+++.+. .++.+...||.++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 97 IEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 9999999875 67899999998875
No 84
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.66 E-value=0.00065 Score=54.91 Aligned_cols=108 Identities=12% Similarity=0.083 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|..+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++.+|
T Consensus 29 ~~~A~~~~~~al~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~------~~~~A 100 (166)
T 1a17_A 29 YENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LG------KFRAA 100 (166)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hc------cHHHH
Confidence 78899999998775 47899999999987 677899999999999875 478899999999864 23 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHH--HhccCCCCCCHHHHHHHHHHHH
Q 018965 157 VALCARAASI--GHVDAVRELGHC--LQDGYGVRQNIEKGRRLLIEAN 200 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~--y~~G~Gv~~d~~~A~~w~~~Aa 200 (348)
+.+|+++.+. .+..+...++.. +.. ..+.++|+.++.++.
T Consensus 101 ~~~~~~a~~~~p~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~~~ 144 (166)
T 1a17_A 101 LRDYETVVKVKPHDKDAKMKYQECNKIVK----QKAFERAIAGDEHKR 144 (166)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHH----HHHHHHHHHcccchH
Confidence 9999999875 567777555544 442 357888888888765
No 85
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.65 E-value=0.0017 Score=60.60 Aligned_cols=112 Identities=20% Similarity=0.141 Sum_probs=91.4
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+.+|+++.+. .++++.+.||.+|. ..++.++|+.+|+++.+. .++.+.+.||.+|.. .| ++++
T Consensus 252 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g------~~~~ 323 (388)
T 1w3b_A 252 LIDLAIDTYRRAIELQPHFPDAYCNLANALK-EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE-QG------NIEE 323 (388)
T ss_dssp CHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TT------CHHH
T ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHH-cC------CHHH
Confidence 378899999998875 47889999999887 567899999999998875 478889999988863 23 7899
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
|+.+|+++.+. .++.+.+.||.+|.. ..+.++|+.+|++|.+..
T Consensus 324 A~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~~ 369 (388)
T 1w3b_A 324 AVRLYRKALEVFPEFAAAHSNLASVLQQ----QGKLQEALMHYKEAIRIS 369 (388)
T ss_dssp HHHHHHHHTTSCTTCHHHHHHHHHHHHT----TTCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhC
Confidence 99999999875 578899999998875 457889999999987643
No 86
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.65 E-value=0.00056 Score=55.33 Aligned_cols=95 Identities=9% Similarity=-0.042 Sum_probs=80.7
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHH
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAV 172 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~ 172 (348)
+.+.+.+|..++ ..++.++|+.+|+++.+. .++.+.+.+|.+|.. . .++.+|+.+|+++.+. .++.+.
T Consensus 13 ~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~-~------~~~~~A~~~~~~a~~~~~~~~~~~ 84 (166)
T 1a17_A 13 AEELKTQANDYF-KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-T------ECYGYALGDATRAIELDKKYIKGY 84 (166)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-c------CCHHHHHHHHHHHHHhCcccHHHH
Confidence 467788888887 678999999999999875 478999999999964 2 3789999999999875 678999
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 173 RELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 173 ~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
+.+|.+|.. ..+.++|+.+|+++.+..
T Consensus 85 ~~~a~~~~~----~~~~~~A~~~~~~a~~~~ 111 (166)
T 1a17_A 85 YRRAASNMA----LGKFRAALRDYETVVKVK 111 (166)
T ss_dssp HHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 999998876 458999999999998764
No 87
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.63 E-value=0.00033 Score=61.76 Aligned_cols=111 Identities=8% Similarity=0.021 Sum_probs=94.6
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHccCCCCCCccC
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS-----HAPALYSLAVIQFNGSGGGKNEKD 152 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G-----~~~A~~~Lg~~y~~G~g~~~~~~d 152 (348)
..++|+.+|+++.+. .++.+.+.+|.+|. ..+++++|+.+|+++.+.+ .+.+.+.+|.+|.. .| +
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~-~~------~ 89 (272)
T 3u4t_A 18 NYAEAIEVFNKLEAKKYNSPYIYNRRAVCYY-ELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMK-KG------Q 89 (272)
T ss_dssp CHHHHHHHHHHHHHTTCCCSTTHHHHHHHHH-HTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHH-TT------C
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH-cc------c
Confidence 378999999999886 47889999999988 6789999999999999854 24568999999964 23 7
Q ss_pred HHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 153 LRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 153 ~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+++|+.+|+++.+. .++.+.+.+|.+|.. ..+.++|+.+|+++.+.
T Consensus 90 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 90 DSLAIQQYQAAVDRDTTRLDMYGQIGSYFYN----KGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp HHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH----TTCHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHH----ccCHHHHHHHHHHHhhc
Confidence 89999999999874 678999999999976 56999999999999875
No 88
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.63 E-value=0.00054 Score=53.10 Aligned_cols=92 Identities=9% Similarity=0.010 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. . .++++|
T Consensus 32 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~------~~~~~A 103 (133)
T 2lni_A 32 YPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA-M------KDYTKA 103 (133)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T------TCHHHH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-H------hhHHHH
Confidence 57899999999876 47999999999998 678999999999999875 478999999999964 2 378999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHh
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQ 180 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~ 180 (348)
+.+|+++.+. .+..+.+.|+.+|.
T Consensus 104 ~~~~~~~~~~~p~~~~~~~~l~~~~~ 129 (133)
T 2lni_A 104 MDVYQKALDLDSSCKEAADGYQRCMM 129 (133)
T ss_dssp HHHHHHHHHHCGGGTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 9999999875 56788899998875
No 89
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.63 E-value=0.00019 Score=67.63 Aligned_cols=110 Identities=13% Similarity=0.101 Sum_probs=90.8
Q ss_pred cHHHHHHHHHHHHHC----C----CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC---------CCHHHHHHHHHHHHc
Q 018965 80 WSDSAHRFLKRCVFA----G----NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK---------SHAPALYSLAVIQFN 142 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~----G----~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~---------G~~~A~~~Lg~~y~~ 142 (348)
..++|+.+|++|.+. + .+.+.+.||.+|. ..++..+|+.+|++|.+. +.+.+.++||.+|..
T Consensus 118 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~ 196 (383)
T 3ulq_A 118 EYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYY-YMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLD 196 (383)
T ss_dssp CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHH
Confidence 389999999999875 4 3578999999998 678999999999999853 235688999999964
Q ss_pred cCCCCCCccCHHHHHHHHHHHHhC----CCH----HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 143 GSGGGKNEKDLRAGVALCARAASI----GHV----DAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 143 G~g~~~~~~d~~~A~~~~~kAA~~----G~~----~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
.| ++++|..+|++|.+. ++. .+.++||.+|.. ..++++|+.+|++|.+
T Consensus 197 -~g------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 197 -LK------QYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNS----QSQYEDAIPYFKRAIA 252 (383)
T ss_dssp -TT------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred -hc------CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 23 789999999999853 433 488999999976 5699999999999988
No 90
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.62 E-value=0.00015 Score=63.73 Aligned_cols=110 Identities=17% Similarity=0.114 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHCC---CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----------CCHHHHHHHHHHHHccCCCC
Q 018965 81 SDSAHRFLKRCVFAG---NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----------SHAPALYSLAVIQFNGSGGG 147 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G---~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----------G~~~A~~~Lg~~y~~G~g~~ 147 (348)
.++|+..+++..... .+.+.+.||.+|. ...+.++|+.+|+++.+. ..+.+.+.||.+|.. .
T Consensus 24 ~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~--- 98 (283)
T 3edt_B 24 CKQALEDLEKTSGHDHPDVATMLNILALVYR-DQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-R--- 98 (283)
T ss_dssp HHHHHHHHHHHHCSSSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHT-T---
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH-h---
Confidence 556666666655434 4678999999998 678999999999999865 235688999999963 2
Q ss_pred CCccCHHHHHHHHHHHHhC----------CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 148 KNEKDLRAGVALCARAASI----------GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 148 ~~~~d~~~A~~~~~kAA~~----------G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.++++|+.+|++|.+. ....+.++||.+|.. ..++++|+.+|+++.+.
T Consensus 99 ---g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 99 ---GKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN----QGKAEEVEYYYRRALEI 156 (283)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred ---ccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 3789999999999875 346788999999875 45899999999999876
No 91
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.60 E-value=0.001 Score=49.98 Aligned_cols=92 Identities=7% Similarity=-0.148 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|..+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+.. ++.+.+.+|.+|.. .| ++++|
T Consensus 20 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~------~~~~A 91 (118)
T 1elw_A 20 IDDALQCYSEAIKLDPHNHVLYSNRSAAYA-KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF-LN------RFEEA 91 (118)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-Hh------hHHHH
Confidence 78999999998775 58999999999998 6789999999999998764 78999999999964 23 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHh
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQ 180 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~ 180 (348)
..+|+++.+. .++.+...++.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 92 KRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 9999999986 57888888887753
No 92
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.60 E-value=0.0012 Score=59.36 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|..+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++|
T Consensus 154 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~------~~~~A 225 (327)
T 3cv0_A 154 YRECRTLLHAALEMNPNDAQLHASLGVLYN-LSNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GN------RPQEA 225 (327)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cC------CHHHH
Confidence 68999999998775 47899999999998 678999999999999865 468899999999975 33 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
..+|+++.+. .++.+.+.||.+|.. ..+.++|+.+|+++.+..
T Consensus 226 ~~~~~~a~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~~ 270 (327)
T 3cv0_A 226 LDAYNRALDINPGYVRVMYNMAVSYSN----MSQYDLAAKQLVRAIYMQ 270 (327)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 9999999875 578999999999876 568999999999997643
No 93
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.60 E-value=0.0011 Score=55.00 Aligned_cols=81 Identities=11% Similarity=0.009 Sum_probs=71.1
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|..+|+++.+. .++.+.+.||.+|. ..+++++|+..|++|.+. +++.+.++||.+|.. .| ++++
T Consensus 51 ~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~-lg------~~~e 122 (151)
T 3gyz_A 51 RIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR-LK------APLK 122 (151)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH-TT------CHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH-cC------CHHH
Confidence 389999999999875 68999999999998 678999999999999875 589999999999974 34 7899
Q ss_pred HHHHHHHHHhCCC
Q 018965 156 GVALCARAASIGH 168 (348)
Q Consensus 156 A~~~~~kAA~~G~ 168 (348)
|...|++|.+...
T Consensus 123 A~~~~~~al~l~~ 135 (151)
T 3gyz_A 123 AKECFELVIQHSN 135 (151)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhCC
Confidence 9999999988643
No 94
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.00046 Score=59.85 Aligned_cols=112 Identities=12% Similarity=0.005 Sum_probs=92.2
Q ss_pred cHHHHHHHHHHHHHCC--C-------HHHHHHhhhhhhhccCCHHHHHHHHHHHHh------------------------
Q 018965 80 WSDSAHRFLKRCVFAG--N-------LEACYTLGMIRFYCLQNRSSGTSLMAKAAM------------------------ 126 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G--~-------~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~------------------------ 126 (348)
..++|+.+|+++.+.. + +.+.+.+|.+|. ..++.++|+.+|+++.+
T Consensus 53 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~ 131 (258)
T 3uq3_A 53 EYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYH-KLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAE 131 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHH
Confidence 3789999999988753 2 688999999988 67789999999999988
Q ss_pred --C--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Q 018965 127 --K--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEAN 200 (348)
Q Consensus 127 --~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa 200 (348)
. .++.+.+.+|.+|.. .| ++++|+.+|+++.+. .++.+.+.+|.+|.. ..+.++|+.+|+++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~-~~------~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al 200 (258)
T 3uq3_A 132 AYVNPEKAEEARLEGKEYFT-KS------DWPNAVKAYTEMIKRAPEDARGYSNRAAALAK----LMSFPEAIADCNKAI 200 (258)
T ss_dssp HHCCHHHHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHH
T ss_pred HHcCcchHHHHHHHHHHHHH-hc------CHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH----hCCHHHHHHHHHHHH
Confidence 3 245688899999864 23 789999999999874 578999999999875 458999999999998
Q ss_pred hcC
Q 018965 201 ARE 203 (348)
Q Consensus 201 ~~G 203 (348)
+..
T Consensus 201 ~~~ 203 (258)
T 3uq3_A 201 EKD 203 (258)
T ss_dssp HHC
T ss_pred HhC
Confidence 754
No 95
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.58 E-value=0.00084 Score=60.90 Aligned_cols=110 Identities=13% Similarity=0.051 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHC----CC----HHHHHHhhhhhhhccCCHHHHHHHHHHHHh----C-C----CHHHHHHHHHHHHcc
Q 018965 81 SDSAHRFLKRCVFA----GN----LEACYTLGMIRFYCLQNRSSGTSLMAKAAM----K-S----HAPALYSLAVIQFNG 143 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G~----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~----~-G----~~~A~~~Lg~~y~~G 143 (348)
.++|+.+|+++.+. ++ ..+.+.||.+|. ..+++++|+.+|++|.+ . + .+.+.++||.+|..
T Consensus 131 ~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~- 208 (293)
T 3u3w_A 131 YEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL- 208 (293)
T ss_dssp HHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH-
Confidence 79999999999873 33 347899999998 67799999999999984 1 2 24578999999964
Q ss_pred CCCCCCccCHHHHHHHHHHHHhC----C----CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 144 SGGGKNEKDLRAGVALCARAASI----G----HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 144 ~g~~~~~~d~~~A~~~~~kAA~~----G----~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
..++++|+++|++|-+. + -+.+.+++|.+|.. ..++.++|..+|++|..
T Consensus 209 ------~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~---~g~~~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 209 ------DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK---LEYEEAEIEDAYKKASF 265 (293)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHH
T ss_pred ------HhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH---hCCcHHHHHHHHHHHHH
Confidence 23889999999998762 2 27899999999975 22357999999999964
No 96
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.55 E-value=0.00069 Score=64.94 Aligned_cols=115 Identities=7% Similarity=-0.017 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+.+++|.+|. ..+++++|+..|++|.+. .++.+.+++|.+|..- | ++++|
T Consensus 148 ~~eAl~~~~~al~l~P~~~~a~~~~g~~~~-~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~-g------~~~eA 219 (382)
T 2h6f_A 148 LHEEMNYITAIIEEQPKNYQVWHHRRVLVE-WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF-K------LWDNE 219 (382)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-T------CCTTH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHc-C------ChHHH
Confidence 78999999998885 58899999999988 456788899999999876 4889999999998642 2 45779
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCC-CCC-HHHHHHHHHHHHhcC
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGV-RQN-IEKGRRLLIEANARE 203 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv-~~d-~~~A~~w~~~Aa~~G 203 (348)
+.+|+++.+. .+..+.+++|.+|..-.|. ... ...++.+|++|.+..
T Consensus 220 l~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~ 270 (382)
T 2h6f_A 220 LQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLV 270 (382)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHC
Confidence 9999999875 6899999999998872222 211 233468888887644
No 97
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.53 E-value=0.00079 Score=61.20 Aligned_cols=95 Identities=17% Similarity=0.139 Sum_probs=65.6
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDA 171 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A 171 (348)
++.+.+.+|..++ ..+++++|+.+|++|.+. .++.+.+++|.+|.. .| ++++|+.+|++|.+. +++.+
T Consensus 3 ~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~------~~~~A~~~~~~al~~~p~~~~~ 74 (281)
T 2c2l_A 3 SAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQ------QPEQALADCRRALELDGQSVKA 74 (281)
T ss_dssp CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHTTSCTTCHHH
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hc------CHHHHHHHHHHHHHhCCCCHHH
Confidence 4566777777776 566777777777777653 367777777777753 22 677777777777764 56777
Q ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 172 VRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 172 ~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.+.+|.+|.. ..+.++|+.+|++|.+.
T Consensus 75 ~~~lg~~~~~----~g~~~~A~~~~~~al~l 101 (281)
T 2c2l_A 75 HFFLGQCQLE----MESYDEAIANLQRAYSL 101 (281)
T ss_dssp HHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 7777777764 34777777777777654
No 98
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.53 E-value=0.00074 Score=57.35 Aligned_cols=101 Identities=14% Similarity=0.031 Sum_probs=76.8
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCH----------------HHHHHHHHHHHccCCCCCCccCHHHHHH
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHA----------------PALYSLAVIQFNGSGGGKNEKDLRAGVA 158 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~----------------~A~~~Lg~~y~~G~g~~~~~~d~~~A~~ 158 (348)
+.+.+.+|..++ ..+++.+|+.+|++|.+. .++ .+.+++|.+|.. .| ++.+|+.
T Consensus 38 ~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~------~~~~A~~ 109 (198)
T 2fbn_A 38 AFDIKEEGNEFF-KKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NK------DYPKAID 109 (198)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TT------CHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hc------CHHHHHH
Confidence 455677787777 677889999999999874 233 788889988864 23 7889999
Q ss_pred HHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc--CCHHHHH
Q 018965 159 LCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR--EFFQSVS 209 (348)
Q Consensus 159 ~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~--G~~~A~~ 209 (348)
+|+++.+. .++.+.+.+|.+|.. ..++++|+.+|++|.+. .+..+..
T Consensus 110 ~~~~al~~~p~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~ 160 (198)
T 2fbn_A 110 HASKVLKIDKNNVKALYKLGVANMY----FGFLEEAKENLYKAASLNPNNLDIRN 160 (198)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHH----cccHHHHHHHHHHHHHHCCCcHHHHH
Confidence 99998764 578899999988865 45889999999998765 3445544
No 99
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.52 E-value=0.00089 Score=56.14 Aligned_cols=109 Identities=17% Similarity=0.194 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHH----C----CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----C-C----HHHHHHHHHHHHcc
Q 018965 81 SDSAHRFLKRCVF----A----GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----S-H----APALYSLAVIQFNG 143 (348)
Q Consensus 81 ~~~A~~~~~kaA~----~----G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G-~----~~A~~~Lg~~y~~G 143 (348)
.++|..+|+++.+ . ..+.+.+.+|.+|. ..+++++|+.+|++|.+. | + ..+.++||.+|..
T Consensus 42 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~- 119 (203)
T 3gw4_A 42 FDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALH- 119 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH-
Confidence 6788888888776 2 34568889999988 677999999999998875 3 3 4578899999864
Q ss_pred CCCCCCccCHHHHHHHHHHHHh----CCCHH----HHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 144 SGGGKNEKDLRAGVALCARAAS----IGHVD----AVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 144 ~g~~~~~~d~~~A~~~~~kAA~----~G~~~----A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
.| ++++|..+|+++.+ .++.. +...||.+|.. ..|.++|..+|++|.+
T Consensus 120 ~g------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~ 175 (203)
T 3gw4_A 120 FG------DLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQ----EKNLLEAQQHWLRARD 175 (203)
T ss_dssp HT------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred hC------CHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH----CcCHHHHHHHHHHHHH
Confidence 23 78999999999874 45544 45888988875 4589999999998864
No 100
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.52 E-value=0.00048 Score=58.64 Aligned_cols=93 Identities=10% Similarity=0.048 Sum_probs=79.4
Q ss_pred HHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHH
Q 018965 98 EACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVREL 175 (348)
Q Consensus 98 ~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~L 175 (348)
...|.+|..++ ..+++++|+..|+++.+. ++.+.+++|.+|.. . .++.+|+.+|++|.+. .++.+.+++
T Consensus 7 ~~~~~~g~~~~-~~~~~~~A~~~~~~a~~~-~~~~~~~lg~~~~~-~------g~~~~A~~~~~~al~~~~~~~~~~~~l 77 (213)
T 1hh8_A 7 ISLWNEGVLAA-DKKDWKGALDAFSAVQDP-HSRICFNIGCMYTI-L------KNMTEAEKAFTRSINRDKHLAVAYFQR 77 (213)
T ss_dssp HHHHHHHHHHH-HTTCHHHHHHHHHTSSSC-CHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHHHHHHHHHcCC-ChHHHHHHHHHHHH-c------CCHHHHHHHHHHHHHhCccchHHHHHH
Confidence 45678888887 678999999999999744 89999999999964 2 3789999999999874 689999999
Q ss_pred HHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 176 GHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 176 g~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
|.+|.. ..+.++|+.+|++|.+..
T Consensus 78 g~~~~~----~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 78 GMLYYQ----TEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHH----TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHH----cccHHHHHHHHHHHHHhC
Confidence 999986 568999999999998853
No 101
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.51 E-value=0.0012 Score=50.46 Aligned_cols=93 Identities=12% Similarity=0.002 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. . .++.+|
T Consensus 28 ~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~A 99 (131)
T 2vyi_A 28 FEAAVHFYGKAIELNPANAVYFCNRAAAYS-KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSS-L------NKHVEA 99 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T------TCHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-h------CCHHHH
Confidence 78999999998765 57899999999998 678999999999999875 468899999999864 2 378999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhc
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQD 181 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~ 181 (348)
..+|+++.+. .+..+.+.+|.++..
T Consensus 100 ~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 100 VAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 9999999875 578899999988753
No 102
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.51 E-value=0.0016 Score=59.53 Aligned_cols=117 Identities=17% Similarity=0.134 Sum_probs=89.3
Q ss_pred cHHHHHHHHHHHHHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHH---ccCCCCCCccCHHHH
Q 018965 80 WSDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQF---NGSGGGKNEKDLRAG 156 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~---~G~g~~~~~~d~~~A 156 (348)
..++|+.+|++ .+++++.+.+|.+|. ..++.++|+.+|+++.+.......++|+..+. .+.| ++++|
T Consensus 116 ~~~~Al~~l~~---~~~~~~~~~l~~~~~-~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~------~~~eA 185 (291)
T 3mkr_A 116 NPDAALRTLHQ---GDSLECMAMTVQILL-KLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGE------KLQDA 185 (291)
T ss_dssp CHHHHHHHHTT---CCSHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTT------HHHHH
T ss_pred CHHHHHHHHhC---CCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCch------HHHHH
Confidence 38899999998 689999999999988 56789999999999987753333444443221 2333 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc--CCHHHHHh
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR--EFFQSVSK 210 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~--G~~~A~~~ 210 (348)
+..|+++.+. .++.+.+.+|.+|.. ..+.++|...|++|.+. .++.+..+
T Consensus 186 ~~~~~~~l~~~p~~~~~~~~la~~~~~----~g~~~eA~~~l~~al~~~p~~~~~l~~ 239 (291)
T 3mkr_A 186 YYIFQEMADKCSPTLLLLNGQAACHMA----QGRWEAAEGVLQEALDKDSGHPETLIN 239 (291)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 9999999874 678899999998876 45899999999998775 35555554
No 103
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.50 E-value=0.00048 Score=61.57 Aligned_cols=77 Identities=12% Similarity=0.036 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHC----------CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC------C----CHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA----------GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK------S----HAPALYSLAVIQ 140 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----------G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~------G----~~~A~~~Lg~~y 140 (348)
.++|..+|+++.+. ....+.+.+|.+|. ..++.++|+.+|+++.+. + .+.+.+.||.+|
T Consensus 127 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 205 (311)
T 3nf1_A 127 YKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ-NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCY 205 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 55666666666553 12345566666665 455666666666666554 1 233555666666
Q ss_pred HccCCCCCCccCHHHHHHHHHHHHh
Q 018965 141 FNGSGGGKNEKDLRAGVALCARAAS 165 (348)
Q Consensus 141 ~~G~g~~~~~~d~~~A~~~~~kAA~ 165 (348)
.. ..++++|..+|+++.+
T Consensus 206 ~~-------~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 206 LK-------QGKFKQAETLYKEILT 223 (311)
T ss_dssp HH-------HTCHHHHHHHHHHHHH
T ss_pred HH-------cCCHHHHHHHHHHHHH
Confidence 42 1255666666666654
No 104
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.50 E-value=0.00063 Score=61.74 Aligned_cols=110 Identities=14% Similarity=0.051 Sum_probs=83.9
Q ss_pred cHHHHHHHHHHHHHC----CC----HHHHHHhhhhhhhccCCHHHHHHHHHHHHh---C--CC----HHHHHHHHHHHHc
Q 018965 80 WSDSAHRFLKRCVFA----GN----LEACYTLGMIRFYCLQNRSSGTSLMAKAAM---K--SH----APALYSLAVIQFN 142 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~----G~----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~---~--G~----~~A~~~Lg~~y~~ 142 (348)
..++|+.+|+++.+. .+ ..+.+.+|.+|. ..+++++|+.+|++|.+ . ++ +.+.+++|.+|..
T Consensus 130 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 2qfc_A 130 DYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp CHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH
Confidence 378999999998753 22 568889999988 67889999999999972 1 22 2688999999863
Q ss_pred cCCCCCCccCHHHHHHHHHHHHhC----C----CHHHHHHHHHHHhccCCCCCCHHHH-HHHHHHHHh
Q 018965 143 GSGGGKNEKDLRAGVALCARAASI----G----HVDAVRELGHCLQDGYGVRQNIEKG-RRLLIEANA 201 (348)
Q Consensus 143 G~g~~~~~~d~~~A~~~~~kAA~~----G----~~~A~~~Lg~~y~~G~Gv~~d~~~A-~~w~~~Aa~ 201 (348)
..++++|+.+|++|.+. + ...+.+++|.+|.. ..+.++| ..+|++|..
T Consensus 209 -------~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~----~g~~~~Ai~~~~~~Al~ 265 (293)
T 2qfc_A 209 -------DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK----LEYEEAEIEDAYKKASF 265 (293)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHH----TTCCHHHHHHHHHHHHH
T ss_pred -------HhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH----cCCcHHHHHHHHHHHHH
Confidence 23789999999998753 1 16788999998875 3477888 788888753
No 105
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.49 E-value=0.00076 Score=52.65 Aligned_cols=92 Identities=10% Similarity=-0.076 Sum_probs=75.0
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+.+|+++.+. .++.+.+++|.+|. ..++.++|+.+|++|.+. .++.+.+.+|.+|.. .| ++++
T Consensus 19 ~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~------~~~~ 90 (126)
T 3upv_A 19 DWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VK------EYAS 90 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-Hh------CHHH
Confidence 378999999999875 58999999999998 678999999999999876 478999999999964 33 7899
Q ss_pred HHHHHHHHHhCC--------CHHHHHHHHHHH
Q 018965 156 GVALCARAASIG--------HVDAVRELGHCL 179 (348)
Q Consensus 156 A~~~~~kAA~~G--------~~~A~~~Lg~~y 179 (348)
|+.+|+++.+.. +..+...|+.+.
T Consensus 91 A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~ 122 (126)
T 3upv_A 91 ALETLDAARTKDAEVNNGSSAREIDQLYYKAS 122 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccCCchhHHHHHHHHHHHH
Confidence 999999997643 455555555443
No 106
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.48 E-value=0.0014 Score=51.84 Aligned_cols=94 Identities=14% Similarity=0.001 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHCCC-----HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCH
Q 018965 81 SDSAHRFLKRCVFAGN-----LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~-----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
.++|+.+|+++.+... +.+.+.+|.+|. ..+++++|+.+|+++.+. .++.+.+.+|.+|.. ..++
T Consensus 44 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-------~~~~ 115 (148)
T 2dba_A 44 YGGALAAYTQALGLDATPQDQAVLHRNRAACHL-KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK-------LGRL 115 (148)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-------HTCH
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH-------cCCH
Confidence 7899999999988653 788999999988 678999999999999875 478999999999964 2378
Q ss_pred HHHHHHHHHHHhC--CCHHHHHHHHHHHhcc
Q 018965 154 RAGVALCARAASI--GHVDAVRELGHCLQDG 182 (348)
Q Consensus 154 ~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G 182 (348)
++|..+|+++.+. .+..+...++.+....
T Consensus 116 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 146 (148)
T 2dba_A 116 DQAVLDLQRCVSLEPKNKVFQEALRNISGPS 146 (148)
T ss_dssp HHHHHHHHHHHHHCSSCHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHhhc
Confidence 9999999999874 5788888888876543
No 107
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.47 E-value=0.00021 Score=59.85 Aligned_cols=112 Identities=8% Similarity=-0.011 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHH--CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC-CHHHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 81 SDSAHRFLKRCVF--AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS-HAPALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 81 ~~~A~~~~~kaA~--~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G-~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
.++|...|+++.+ -+++.+.+.+|.+|. ..++.++|+..|+++.+.. ++.....++.+...+.+ +..+|+
T Consensus 22 ~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~------~~~~a~ 94 (176)
T 2r5s_A 22 HAQALNVIQTLSDELQSRGDVKLAKADCLL-ETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQA------AESPEL 94 (176)
T ss_dssp HHHHHHHHHTSCHHHHTSHHHHHHHHHHHH-HTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHH------TSCHHH
T ss_pred HHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhc------ccchHH
Confidence 6788999988654 578999999999988 6778999999999987665 45555555555433222 112468
Q ss_pred HHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 158 ALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 158 ~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
..|+++.+. +++.+.+.||.+|.. ..+.++|+.+|+++.+..
T Consensus 95 ~~~~~al~~~P~~~~~~~~la~~~~~----~g~~~~A~~~~~~~l~~~ 138 (176)
T 2r5s_A 95 KRLEQELAANPDNFELACELAVQYNQ----VGRDEEALELLWNILKVN 138 (176)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHH----cccHHHHHHHHHHHHHhC
Confidence 889888764 679999999998875 458999999999998765
No 108
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.44 E-value=0.00057 Score=60.59 Aligned_cols=103 Identities=14% Similarity=0.042 Sum_probs=85.2
Q ss_pred HCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CC---HHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC-
Q 018965 93 FAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SH---APALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI- 166 (348)
Q Consensus 93 ~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~---~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~- 166 (348)
+..++++.|.+|..++ ..+++++|+.+|+++.+. ++ +.+.+.||.+|.. . .++.+|+.+|+++.+.
T Consensus 11 ~~~~~~~~~~~a~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~------~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 11 RHSSPQEAFERAMEFY-NQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-N------KEYLLAASEYERFIQIY 82 (261)
T ss_dssp CCSSHHHHHHHHHHHH-HTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-h------CcHHHHHHHHHHHHHHC
Confidence 4578899999999998 678999999999999886 46 8899999999974 2 3899999999999985
Q ss_pred ----CCHHHHHHHHHHHhcc-C---CCCCCHHHHHHHHHHHHhcC
Q 018965 167 ----GHVDAVRELGHCLQDG-Y---GVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 167 ----G~~~A~~~Lg~~y~~G-~---Gv~~d~~~A~~w~~~Aa~~G 203 (348)
..+.+.+.+|.+|..- . --..+..+|+.+|+++.+..
T Consensus 83 p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~ 127 (261)
T 3qky_A 83 QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY 127 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC
T ss_pred CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC
Confidence 3378999999998751 1 11458899999999998753
No 109
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.44 E-value=0.00058 Score=64.24 Aligned_cols=110 Identities=12% Similarity=0.040 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHC----C-----CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHcc
Q 018965 81 SDSAHRFLKRCVFA----G-----NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNG 143 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G-----~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G 143 (348)
.++|+.++++|.+. + .+.+.+.||.+|. ..+++++|+.+|++|.+. |+ ..+.++||.+|..
T Consensus 157 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~- 234 (378)
T 3q15_A 157 THVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD-DFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR- 234 (378)
T ss_dssp HHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-
Confidence 78899999888763 2 2568889999998 678999999999999874 33 4688899999964
Q ss_pred CCCCCCccCHHHHHHHHHHHHh-----C--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 144 SGGGKNEKDLRAGVALCARAAS-----I--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 144 ~g~~~~~~d~~~A~~~~~kAA~-----~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
. .++++|..+|++|.+ . ..+.+.+.||.+|.. ..+.++|..+|++|.+.
T Consensus 235 ~------~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 235 S------GDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK----AGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp H------TCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred C------CCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHH
Confidence 2 378999999999987 3 237889999999875 56899999999999874
No 110
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.43 E-value=0.0018 Score=49.55 Aligned_cols=94 Identities=18% Similarity=0.241 Sum_probs=78.2
Q ss_pred HHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHH
Q 018965 98 EACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVR 173 (348)
Q Consensus 98 ~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~ 173 (348)
++.+.+|..|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. ..++++|..+|+++.+. .++.+.+
T Consensus 2 ~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-------~~~~~~A~~~~~~~~~~~~~~~~~~~ 73 (136)
T 2fo7_A 2 EAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-------QGDYDEAIEYYQKALELDPRSAEAWY 73 (136)
T ss_dssp HHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-------HTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHH-HcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHCCCchHHHH
Confidence 56788888887 567999999999999764 478899999999864 23789999999999764 5788899
Q ss_pred HHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 174 ELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 174 ~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
.+|.+|.. ..+.++|..+|+++....
T Consensus 74 ~l~~~~~~----~~~~~~A~~~~~~~~~~~ 99 (136)
T 2fo7_A 74 NLGNAYYK----QGDYDEAIEYYQKALELD 99 (136)
T ss_dssp HHHHHHHT----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 99998875 458999999999998754
No 111
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.43 E-value=0.002 Score=60.27 Aligned_cols=110 Identities=15% Similarity=0.047 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|...|+++.+. .++.+.+.+|.+|. ..++..+|+.+|+++.+. .++.+.+.+|.+|..- .++++|
T Consensus 151 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-------~~~~~A 222 (388)
T 1w3b_A 151 LEEAKACYLKAIETQPNFAVAWSNLGCVFN-AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA-------RIFDRA 222 (388)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT-------TCTTHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHc-------CCHHHH
Confidence 56777777776653 45667777777766 456677777777776644 3566666677666431 244556
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+..|+++.+. .++.+.+.||.+|.. ..+.++|+.+|+++.+.
T Consensus 223 ~~~~~~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 266 (388)
T 1w3b_A 223 VAAYLRALSLSPNHAVVHGNLACVYYE----QGLIDLAIDTYRRAIEL 266 (388)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhCcCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhh
Confidence 6666665543 345566666665543 33566666666666554
No 112
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.42 E-value=0.00068 Score=53.86 Aligned_cols=109 Identities=16% Similarity=0.106 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHC----CCH----HHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFA----GNL----EACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G~~----~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G~ 144 (348)
.++|+.+|+++.+. +++ .+.+.+|.+|. ..++.++|+.+|++|.+. ++ ..+.+++|.+|.. .
T Consensus 25 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 102 (164)
T 3ro3_A 25 FRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL-L 102 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH-H
Confidence 67788888877654 443 47888999888 678999999999998764 33 4578899998864 2
Q ss_pred CCCCCccCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 145 GGGKNEKDLRAGVALCARAASI----GH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~~----G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
| ++++|..+|+++.+. ++ ..+.+.||.+|.. ..+.++|..+|++|.+
T Consensus 103 ~------~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 103 Q------DYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTA----LGNHDQAMHFAEKHLE 157 (164)
T ss_dssp T------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred h------hHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHH
Confidence 3 789999999998753 33 4578889988865 4589999999999864
No 113
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.42 E-value=0.00045 Score=65.03 Aligned_cols=110 Identities=7% Similarity=0.019 Sum_probs=89.8
Q ss_pred cHHHHHHHHHHHHHC----C----CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC---------CCHHHHHHHHHHHHc
Q 018965 80 WSDSAHRFLKRCVFA----G----NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK---------SHAPALYSLAVIQFN 142 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~----G----~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~---------G~~~A~~~Lg~~y~~ 142 (348)
..++|+.+|++|.+. + .+.+.+.||.+|. ..++..+|+.++++|.+. +.+.+.++||.+|..
T Consensus 116 ~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~ 194 (378)
T 3q15_A 116 EYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYY-HMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDD 194 (378)
T ss_dssp CHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 388999999999865 3 3678999999998 677999999999999853 235688899999964
Q ss_pred cCCCCCCccCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 143 GSGGGKNEKDLRAGVALCARAASI----GH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 143 G~g~~~~~~d~~~A~~~~~kAA~~----G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
. .++++|.++|++|.+. |+ ..+.++||.+|.. ..+.++|+.+|++|.+
T Consensus 195 -~------~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 195 -F------KHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR----SGDDQMAVEHFQKAAK 250 (378)
T ss_dssp -T------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred -h------CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 2 3789999999999763 44 4578899999875 4599999999999987
No 114
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.42 E-value=0.0008 Score=55.30 Aligned_cols=89 Identities=9% Similarity=0.009 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+++.+|.+|+ ..+++++|+.+|++|.+. .++.+.++||.+|.. .| ++++|
T Consensus 27 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g------~~~~A 98 (164)
T 3sz7_A 27 YSKAIDLYTQALSIAPANPIYLSNRAAAYS-ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD-MA------DYKGA 98 (164)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cc------CHHHH
Confidence 78999999999875 58999999999998 678999999999999876 478999999999964 33 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHH
Q 018965 157 VALCARAASI--GHVDAVRELGH 177 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~ 177 (348)
+.+|+++.+. .+..+.+.++.
T Consensus 99 ~~~~~~al~~~p~~~~~~~~~~l 121 (164)
T 3sz7_A 99 KEAYEKGIEAEGNGGSDAMKRGL 121 (164)
T ss_dssp HHHHHHHHHHHSSSCCHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHH
Confidence 9999999764 44555555544
No 115
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.41 E-value=0.0046 Score=60.99 Aligned_cols=112 Identities=11% Similarity=0.016 Sum_probs=92.6
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----C---C--HHHHHHHHHHHHccCCCCC
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----S---H--APALYSLAVIQFNGSGGGK 148 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G---~--~~A~~~Lg~~y~~G~g~~~ 148 (348)
..++|..+|+++.+. .++.+.+.+|.+|. ..++.++|+++|+++.+. + + ..+.+.||.+|.. .|
T Consensus 456 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~-~g--- 530 (597)
T 2xpi_A 456 NILLANEYLQSSYALFQYDPLLLNELGVVAF-NKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRK-LK--- 530 (597)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHH-TT---
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH-hc---
Confidence 378999999998774 57899999999988 677899999999999875 1 1 6788999998864 33
Q ss_pred CccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 149 NEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 149 ~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
++++|.++|+++.+. .++.+.+.||.+|.. ..+.++|..+|+++.+..
T Consensus 531 ---~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~l~~~ 580 (597)
T 2xpi_A 531 ---MYDAAIDALNQGLLLSTNDANVHTAIALVYLH----KKIPGLAITHLHESLAIS 580 (597)
T ss_dssp ---CHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred ---CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----hCCHHHHHHHHHHHHhcC
Confidence 789999999999875 478999999998876 458999999999998754
No 116
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.40 E-value=0.00078 Score=60.15 Aligned_cols=110 Identities=18% Similarity=0.155 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHC----------CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC------C----CHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA----------GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK------S----HAPALYSLAVIQ 140 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----------G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~------G----~~~A~~~Lg~~y 140 (348)
.++|+.+|+++.+. ..+.+.+.+|.+|. ...+.++|+.+|+++.+. + ...+.+.||.+|
T Consensus 43 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (311)
T 3nf1_A 43 YEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYR-DQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLY 121 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Confidence 67888888887763 23567889999987 677999999999999875 2 356888999998
Q ss_pred HccCCCCCCccCHHHHHHHHHHHHhC----------CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 141 FNGSGGGKNEKDLRAGVALCARAASI----------GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 141 ~~G~g~~~~~~d~~~A~~~~~kAA~~----------G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.. .| ++.+|..+|+++.+. ....+.+.||.+|.. ..+.++|+.+|+++.+.
T Consensus 122 ~~-~g------~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 122 GK-RG------KYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN----QGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HT-TT------CHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HH-cC------cHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 63 23 789999999999874 235678889998875 46899999999999875
No 117
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.39 E-value=0.0032 Score=51.31 Aligned_cols=79 Identities=13% Similarity=0.077 Sum_probs=68.7
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+..|+++.+. .++.+.+.||.+|. ..+++++|+.+|++|.+. .++.+.++||.+|.. .| ++++
T Consensus 36 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g------~~~~ 107 (148)
T 2vgx_A 36 XYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ-XG------ELAE 107 (148)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TT------CHHH
T ss_pred ChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-cC------CHHH
Confidence 378999999998764 68999999999998 678999999999999875 589999999999964 34 7899
Q ss_pred HHHHHHHHHhC
Q 018965 156 GVALCARAASI 166 (348)
Q Consensus 156 A~~~~~kAA~~ 166 (348)
|..+|+++.+.
T Consensus 108 A~~~~~~al~~ 118 (148)
T 2vgx_A 108 AESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999764
No 118
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.39 E-value=0.00093 Score=50.60 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=61.6
Q ss_pred CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHh----CC
Q 018965 94 AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAAS----IG 167 (348)
Q Consensus 94 ~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~----~G 167 (348)
-.++.+.+.||.+|+ ..+++++|+.+|+++.+.. ++.+.+.||.+|.. .| ++++|+.+|++|.+ .+
T Consensus 4 p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g------~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 4 PEDPFTRYALAQEHL-KHDNASRALALFEELVETDPDYVGTYYHLGKLYER-LD------RTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp -CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cC------CHHHHHHHHHHHHhhhhcCC
Confidence 467888888998887 6678889999998888764 67888889988864 23 67888888888864 47
Q ss_pred CHHHHHHHHHHHhcc
Q 018965 168 HVDAVRELGHCLQDG 182 (348)
Q Consensus 168 ~~~A~~~Lg~~y~~G 182 (348)
+..+...+..++...
T Consensus 76 ~~~~~~~l~~~l~~~ 90 (100)
T 3ma5_A 76 TQKDLSELQDAKLKA 90 (100)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHc
Confidence 777777777766543
No 119
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.39 E-value=0.0012 Score=50.64 Aligned_cols=92 Identities=12% Similarity=0.109 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--C-------HHHHHHHHHHHHccCCCCCC
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--H-------APALYSLAVIQFNGSGGGKN 149 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~-------~~A~~~Lg~~y~~G~g~~~~ 149 (348)
.++|..+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+.. + +.+.+.+|.+|.. .|
T Consensus 20 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~---- 93 (131)
T 1elr_A 20 FDTALKHYDKAKELDPTNMTYITNQAAVYF-EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFK-EE---- 93 (131)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH-TT----
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-hc----
Confidence 78999999999876 57899999999998 6789999999999998764 3 7899999999974 23
Q ss_pred ccCHHHHHHHHHHHHhC-CCHHHHHHHHHHHh
Q 018965 150 EKDLRAGVALCARAASI-GHVDAVRELGHCLQ 180 (348)
Q Consensus 150 ~~d~~~A~~~~~kAA~~-G~~~A~~~Lg~~y~ 180 (348)
++.+|..+|+++.+. .++.....++.++.
T Consensus 94 --~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~ 123 (131)
T 1elr_A 94 --KYKDAIHFYNKSLAEHRTPDVLKKCQQAEK 123 (131)
T ss_dssp --CHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 789999999999875 46777888877654
No 120
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.39 E-value=0.00094 Score=62.44 Aligned_cols=115 Identities=10% Similarity=0.033 Sum_probs=82.0
Q ss_pred HHHHHHHHHHH--CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--C---------------HHHHHHHHHHHHcc
Q 018965 83 SAHRFLKRCVF--AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--H---------------APALYSLAVIQFNG 143 (348)
Q Consensus 83 ~A~~~~~kaA~--~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~---------------~~A~~~Lg~~y~~G 143 (348)
+|+..|+++.+ ..++.+.+.+|..|+ ..+++++|+..|++|.+.. + +.++++||.+|..
T Consensus 131 ~A~~~~~~a~~~~p~~a~~~~~~g~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~- 208 (336)
T 1p5q_A 131 KAKESWEMNSEEKLEQSTIVKERGTVYF-KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK- 208 (336)
T ss_dssp CCCCGGGCCHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cccchhcCCHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 34444444332 345678888888887 5678888888888888654 3 5788888888864
Q ss_pred CCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC--CHHHHH
Q 018965 144 SGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE--FFQSVS 209 (348)
Q Consensus 144 ~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G--~~~A~~ 209 (348)
. .++.+|+.+|++|.+. .++.+.+++|.+|.. ..++++|+.+|++|.+.. +..+..
T Consensus 209 ~------g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~P~~~~a~~ 268 (336)
T 1p5q_A 209 L------QAFSAAIESCNKALELDSNNEKGLSRRGEAHLA----VNDFELARADFQKVLQLYPNNKAAKT 268 (336)
T ss_dssp T------TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred c------CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 2 2678888888888764 578888888888765 458888888888887653 344443
No 121
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.38 E-value=0.0024 Score=58.32 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHC----CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA----GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|++.|++..+. +++.+.+.+|.+|. ..++.++|+.+|++ .+++++.+.+|.+|.. .| +.++|
T Consensus 81 ~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~-~~g~~~~Al~~l~~---~~~~~~~~~l~~~~~~-~g------~~~~A 149 (291)
T 3mkr_A 81 RDAIVAELDREMSRSVDVTNTTFLLMAASIYF-YDQNPDAALRTLHQ---GDSLECMAMTVQILLK-LD------RLDLA 149 (291)
T ss_dssp HHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHH-HTTCHHHHHHHHTT---CCSHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHH-HCCCHHHHHHHHhC---CCCHHHHHHHHHHHHH-CC------CHHHH
Confidence 78999999998764 48999999999998 78899999999999 6899999999999864 33 68999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHhc-cCCCCCCHHHHHHHHHHHHhc
Q 018965 157 VALCARAASIGHVDAVRELGHCLQD-GYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 157 ~~~~~kAA~~G~~~A~~~Lg~~y~~-G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
..+|+++.+.........|+..+.. +.+ ..++++|+..|+++.+.
T Consensus 150 ~~~l~~~~~~~p~~~~~~l~~a~~~l~~~-~~~~~eA~~~~~~~l~~ 195 (291)
T 3mkr_A 150 RKELKKMQDQDEDATLTQLATAWVSLAAG-GEKLQDAYYIFQEMADK 195 (291)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHC-TTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcCcHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHh
Confidence 9999999876543344444432211 111 25899999999999876
No 122
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.38 E-value=0.00031 Score=54.65 Aligned_cols=78 Identities=19% Similarity=0.144 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCC
Q 018965 113 NRSSGTSLMAKAAMKS-----HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGV 185 (348)
Q Consensus 113 d~~~A~~~~~~AA~~G-----~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv 185 (348)
+.++|+.+|++|.+.+ ++.+.++||.+|.. .| ++++|+.+|+++.+. .++.+.++||.+|..
T Consensus 5 ~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~-~~------~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~---- 73 (117)
T 3k9i_A 5 LEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRT-LG------EYRKAEAVLANGVKQFPNHQALRVFYAMVLYN---- 73 (117)
T ss_dssp --CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----
T ss_pred cHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH-cC------CHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH----
Confidence 3444555555555442 23455555555532 11 445555555555443 345555555555443
Q ss_pred CCCHHHHHHHHHHHHh
Q 018965 186 RQNIEKGRRLLIEANA 201 (348)
Q Consensus 186 ~~d~~~A~~w~~~Aa~ 201 (348)
..+.++|+.+|+++.+
T Consensus 74 ~g~~~~A~~~~~~al~ 89 (117)
T 3k9i_A 74 LGRYEQGVELLLKIIA 89 (117)
T ss_dssp HTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 2345555555555543
No 123
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.37 E-value=0.0014 Score=61.24 Aligned_cols=107 Identities=18% Similarity=0.112 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHCC--C---------------HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFAG--N---------------LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQF 141 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G--~---------------~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~ 141 (348)
.++|+..|++|.+.. + +.++++||.+|+ ..+++++|+.+|++|.+. .++.+.+++|.+|.
T Consensus 163 ~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 241 (336)
T 1p5q_A 163 YKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL-KLQAFSAAIESCNKALELDSNNEKGLSRRGEAHL 241 (336)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 789999999998853 4 589999999998 678999999999999876 48999999999996
Q ss_pred ccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHH-HHHHHHH
Q 018965 142 NGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKG-RRLLIEA 199 (348)
Q Consensus 142 ~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A-~~w~~~A 199 (348)
. .| ++++|+.+|++|.+. .+..+.+.|+.+|.. ..+..+| ...|++.
T Consensus 242 ~-~g------~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~----~~~~~~a~~~~~~~~ 291 (336)
T 1p5q_A 242 A-VN------DFELARADFQKVLQLYPNNKAAKTQLAVCQQR----IRRQLAREKKLYANM 291 (336)
T ss_dssp H-TT------CHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred H-CC------CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 4 33 799999999999875 689999999999874 2345555 3344443
No 124
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.35 E-value=0.0018 Score=58.71 Aligned_cols=78 Identities=14% Similarity=0.024 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+..|+++.+. .++.+.+++|.+|. ..+++++|+.+|++|.+. +++.+.+.+|.+|.. .| ++++|
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g------~~~~A 91 (281)
T 2c2l_A 20 YPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-ME------SYDEA 91 (281)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC------CHHHH
Confidence 78999999999874 58999999999998 677999999999999886 578999999999974 33 78999
Q ss_pred HHHHHHHHhC
Q 018965 157 VALCARAASI 166 (348)
Q Consensus 157 ~~~~~kAA~~ 166 (348)
..+|++|.+.
T Consensus 92 ~~~~~~al~l 101 (281)
T 2c2l_A 92 IANLQRAYSL 101 (281)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 125
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.34 E-value=0.0076 Score=59.40 Aligned_cols=111 Identities=11% Similarity=0.011 Sum_probs=94.8
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|..+|+++.+. .++.+.+.||.+|. ..++.++|+++|+++.+.+ ++.+.+.||.+|.. .| ++++
T Consensus 388 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g------~~~~ 459 (597)
T 2xpi_A 388 KISEARRYFSKSSTMDPQFGPAWIGFAHSFA-IEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ-LG------NILL 459 (597)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH-HT------CHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cC------CHHH
Confidence 378999999998764 57899999999998 6789999999999998764 67899999999964 23 7899
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
|.++|+++.+. .++.+.+.||.+|.. ..+.++|+.+|+++.+.
T Consensus 460 A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 460 ANEYLQSSYALFQYDPLLLNELGVVAFN----KSDMQTAINHFQNALLL 504 (597)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHH----hCCHHHHHHHHHHHHHh
Confidence 99999999764 678999999998875 45899999999999875
No 126
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.34 E-value=0.0011 Score=63.11 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=82.3
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHh------------------CCCHHHHHHHHHHHHccCCCCCCccCHHHHHH
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAM------------------KSHAPALYSLAVIQFNGSGGGKNEKDLRAGVA 158 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~------------------~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~ 158 (348)
+.+++.+|..++ ..+++++|+..|++|.+ ..++.+.++||.+|.. .| ++++|+.
T Consensus 223 a~~~~~~g~~~~-~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g------~~~~A~~ 294 (370)
T 1ihg_A 223 SEDLKNIGNTFF-KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MS------DWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TT------CHHHHHH
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-cc------CHHHHHH
Confidence 356788888887 67899999999999986 2356789999999974 33 7899999
Q ss_pred HHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC--CHHHHH
Q 018965 159 LCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE--FFQSVS 209 (348)
Q Consensus 159 ~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G--~~~A~~ 209 (348)
+|++|.+. .++.+.+.+|.+|.. ..++++|+.+|++|.+.. +..+..
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~----~g~~~eA~~~l~~Al~l~P~~~~~~~ 345 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQG----LKEYDQALADLKKAQEIAPEDKAIQA 345 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999986 589999999999876 468999999999998764 444443
No 127
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.33 E-value=0.0019 Score=54.82 Aligned_cols=93 Identities=16% Similarity=0.086 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHC--CCH----------------HHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNL----------------EACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQ 140 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~----------------~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y 140 (348)
.++|+.+|+++.+. .++ .+.+++|.+|. ..+++++|+.+|+++.+. .++.+.+.+|.+|
T Consensus 54 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 132 (198)
T 2fbn_A 54 INEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYN-KNKDYPKAIDHASKVLKIDKNNVKALYKLGVAN 132 (198)
T ss_dssp HHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 78999999999985 344 89999999998 678999999999999875 4789999999999
Q ss_pred HccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhc
Q 018965 141 FNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQD 181 (348)
Q Consensus 141 ~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~ 181 (348)
.. ..++++|+.+|+++.+. .+..+...|+.++..
T Consensus 133 ~~-------~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 168 (198)
T 2fbn_A 133 MY-------FGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 168 (198)
T ss_dssp HH-------HTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HH-------cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 63 23789999999999865 688999999988753
No 128
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.32 E-value=0.0055 Score=58.03 Aligned_cols=111 Identities=11% Similarity=0.024 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+.+ ++.+.+.||.+|.. .| ++++|
T Consensus 42 ~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g------~~~~A 113 (450)
T 2y4t_A 42 LADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK-QG------KLDEA 113 (450)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-cC------CHHHH
Confidence 78999999998874 68999999999998 6678999999999998864 78899999999974 33 78999
Q ss_pred HHHHHHHHhCCC--H---HHHHHH------------HHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 157 VALCARAASIGH--V---DAVREL------------GHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 157 ~~~~~kAA~~G~--~---~A~~~L------------g~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
..+|+++.+... . .+...| |..|.. ..+.++|+.+|+++.+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 173 (450)
T 2y4t_A 114 EDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFG----SGDYTAAIAFLDKILEVC 173 (450)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 999999988653 3 444444 444543 457888888888887653
No 129
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.32 E-value=0.0024 Score=49.04 Aligned_cols=75 Identities=13% Similarity=0.011 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHH
Q 018965 83 SAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVA 158 (348)
Q Consensus 83 ~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~ 158 (348)
+++..|+++.+. .++.+.+.||.+|. ..+++++|+.+|+++.+. .++.+.+.||.+|.. .| +..+|..
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g------~~~~A~~ 74 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYA-EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QG------DRAGARQ 74 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HT------CHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cC------CHHHHHH
Confidence 345566666553 46677777777766 456677777777777654 356677777777653 22 5667777
Q ss_pred HHHHHHh
Q 018965 159 LCARAAS 165 (348)
Q Consensus 159 ~~~kAA~ 165 (348)
+|+++.+
T Consensus 75 ~~~~al~ 81 (115)
T 2kat_A 75 AWESGLA 81 (115)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 130
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.30 E-value=0.0084 Score=54.24 Aligned_cols=111 Identities=14% Similarity=0.038 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHC-----CCHHHHHHhh------------hhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA-----GNLEACYTLG------------MIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQF 141 (348)
Q Consensus 81 ~~~A~~~~~kaA~~-----G~~~A~~~Lg------------~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~ 141 (348)
.++|+.+|+++.+. .++.+.+.++ .++. ..++.++|+.+|+++.+.. ++.+.+.+|.+|.
T Consensus 87 ~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
T 3ieg_A 87 LDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAF-DGADYTAAITFLDKILEVCVWDAELRELRAECFI 165 (359)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 56777777777665 3345555553 3333 4567777777777777653 5667777777765
Q ss_pred ccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 142 NGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 142 ~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
. . .++++|..+|+++.+. .++.+.+.+|.+|.. ..+.++|..+|+++.+..
T Consensus 166 ~-~------~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~ 218 (359)
T 3ieg_A 166 K-E------GEPRKAISDLKAASKLKSDNTEAFYKISTLYYQ----LGDHELSLSEVRECLKLD 218 (359)
T ss_dssp H-T------TCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred H-C------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhC
Confidence 3 2 2567777777777664 467777777777654 346777777777776543
No 131
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.30 E-value=0.0049 Score=58.34 Aligned_cols=81 Identities=11% Similarity=0.010 Sum_probs=43.0
Q ss_pred cCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHh--CCCHHHHHHHHHHHhccCCCC
Q 018965 111 LQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAAS--IGHVDAVRELGHCLQDGYGVR 186 (348)
Q Consensus 111 ~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~--~G~~~A~~~Lg~~y~~G~Gv~ 186 (348)
.++.++|+.+|+++.+.. ++.+.+.+|.+|.. .| ++++|+.+|+++.+ ..++.+.+.||.+|.. .
T Consensus 156 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g------~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~ 224 (450)
T 2y4t_A 156 SGDYTAAIAFLDKILEVCVWDAELRELRAECFIK-EG------EPRKAISDLKAASKLKNDNTEAFYKISTLYYQ----L 224 (450)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHH----T
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-CC------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----c
Confidence 344444445554444432 44455555555532 11 44556666666554 2456666666666554 3
Q ss_pred CCHHHHHHHHHHHHhc
Q 018965 187 QNIEKGRRLLIEANAR 202 (348)
Q Consensus 187 ~d~~~A~~w~~~Aa~~ 202 (348)
.+.++|+.+|+++...
T Consensus 225 g~~~~A~~~~~~~~~~ 240 (450)
T 2y4t_A 225 GDHELSLSEVRECLKL 240 (450)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 4666666666666544
No 132
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.29 E-value=0.0013 Score=52.93 Aligned_cols=78 Identities=15% Similarity=0.124 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|..+|+++.+. .++.+.+.||.+|. ..+++++|+.+|++|.+. .++.+.+.+|.+|.. .| ++++|
T Consensus 34 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g------~~~~A 105 (142)
T 2xcb_A 34 WDDAQKIFQALCMLDHYDARYFLGLGACRQ-SLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQ-LG------DLDGA 105 (142)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH-cC------CHHHH
Confidence 78999999998875 58999999999998 678999999999999876 588999999999974 34 78999
Q ss_pred HHHHHHHHhC
Q 018965 157 VALCARAASI 166 (348)
Q Consensus 157 ~~~~~kAA~~ 166 (348)
..+|+++.+.
T Consensus 106 ~~~~~~al~~ 115 (142)
T 2xcb_A 106 ESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 133
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.29 E-value=0.0021 Score=50.92 Aligned_cols=87 Identities=16% Similarity=0.125 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--C-------HHHHHHHHHHHHccCCCCCC
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--H-------APALYSLAVIQFNGSGGGKN 149 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~-------~~A~~~Lg~~y~~G~g~~~~ 149 (348)
.++|+.+|++|.+. .++.+.+++|.+|+ ..+++++|+.+|++|.+.. + ..++++||.+|.. .
T Consensus 24 ~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~-~----- 96 (127)
T 4gcn_A 24 FEKAHVHYDKAIELDPSNITFYNNKAAVYF-EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQK-Q----- 96 (127)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-T-----
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHhHHHHHH-HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHH-c-----
Confidence 78999999999885 68999999999998 6789999999999998753 1 3588899988853 3
Q ss_pred ccCHHHHHHHHHHHHhC-CCHHHHHHH
Q 018965 150 EKDLRAGVALCARAASI-GHVDAVREL 175 (348)
Q Consensus 150 ~~d~~~A~~~~~kAA~~-G~~~A~~~L 175 (348)
.++++|+++|++|.+. -+++..-.|
T Consensus 97 -~~~~~A~~~~~kal~~~~~~~~~~~l 122 (127)
T 4gcn_A 97 -NDLSLAVQWFHRSLSEFRDPELVKKV 122 (127)
T ss_dssp -TCHHHHHHHHHHHHHHSCCHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhhCcCHHHHHHH
Confidence 3899999999999753 455544443
No 134
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.28 E-value=0.015 Score=51.98 Aligned_cols=80 Identities=18% Similarity=0.109 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCC
Q 018965 113 NRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQN 188 (348)
Q Consensus 113 d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d 188 (348)
+.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++|+.+|+++.+. .++.+.+.+|.+|.. ..+
T Consensus 153 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~------~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~ 221 (327)
T 3cv0_A 153 EYRECRTLLHAALEMNPNDAQLHASLGVLYNL-SN------NYDSAAANLRRAVELRPDDAQLWNKLGATLAN----GNR 221 (327)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTC
T ss_pred cHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-hc------cHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCC
Confidence 344455555554433 256777888887753 23 678888888888754 567888888888875 457
Q ss_pred HHHHHHHHHHHHhcC
Q 018965 189 IEKGRRLLIEANARE 203 (348)
Q Consensus 189 ~~~A~~w~~~Aa~~G 203 (348)
.++|+.+|+++.+..
T Consensus 222 ~~~A~~~~~~a~~~~ 236 (327)
T 3cv0_A 222 PQEALDAYNRALDIN 236 (327)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcC
Confidence 888888888887654
No 135
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.27 E-value=0.0012 Score=60.64 Aligned_cols=107 Identities=12% Similarity=0.072 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHC----CCH----HHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFA----GNL----EACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G~~----~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G~ 144 (348)
.++|+.+|++|.+. |++ .+..+||.+|. . .++++|+.+|++|.+. |+ ..++++||.+|.. .
T Consensus 92 ~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~-~ 168 (307)
T 2ifu_A 92 MPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR-Q 168 (307)
T ss_dssp GGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH-c
Confidence 56788888887654 554 57889999997 4 9999999999999864 33 5688899999964 3
Q ss_pred CCCCCccCHHHHHHHHHHHHh----CCC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Q 018965 145 GGGKNEKDLRAGVALCARAAS----IGH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEAN 200 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~----~G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa 200 (348)
| ++.+|+.+|+++.+ .+. ..+.+.+|.+|.. ..|+.+|+.+|+++.
T Consensus 169 g------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 169 Q------KFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLH----RADYVAAQKCVRESY 222 (307)
T ss_dssp T------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHT
T ss_pred C------CHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHh
Confidence 3 78999999999987 343 3467777887764 348999999999997
No 136
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.26 E-value=0.0017 Score=59.01 Aligned_cols=112 Identities=14% Similarity=0.103 Sum_probs=87.9
Q ss_pred cHHHHHHHHHHHHHC----CC----HHHHHHhhhhhhhcc-CCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHc
Q 018965 80 WSDSAHRFLKRCVFA----GN----LEACYTLGMIRFYCL-QNRSSGTSLMAKAAMK----SH----APALYSLAVIQFN 142 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~----G~----~~A~~~Lg~~y~~~~-~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~ 142 (348)
..++|+.+|++|.+. |+ +.++.+||.+|. .. +++++|+.+|++|.+. |+ ..+..+||.+|..
T Consensus 92 ~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~ 170 (292)
T 1qqe_A 92 NSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE-NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL 170 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Confidence 378899999998764 55 458889999997 54 8999999999999864 33 4578899999864
Q ss_pred cCCCCCCccCHHHHHHHHHHHHhCC--CH-------HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 143 GSGGGKNEKDLRAGVALCARAASIG--HV-------DAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 143 G~g~~~~~~d~~~A~~~~~kAA~~G--~~-------~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
.| ++.+|+.+|+++.+.. +. .+.+++|.+|.. ..|+.+|+..|++|.+..
T Consensus 171 -~g------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 229 (292)
T 1qqe_A 171 -DG------QYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLA----ATDAVAAARTLQEGQSED 229 (292)
T ss_dssp -TT------CHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHH----TTCHHHHHHHHHGGGCC-
T ss_pred -hC------CHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhC
Confidence 33 7899999999999842 21 267889998875 458999999999997643
No 137
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.24 E-value=0.00054 Score=70.54 Aligned_cols=117 Identities=10% Similarity=0.049 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHH--------H--CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCC
Q 018965 81 SDSAHRFLKRCV--------F--AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGK 148 (348)
Q Consensus 81 ~~~A~~~~~kaA--------~--~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~ 148 (348)
.++|+..|+++. + -.++++.+.+|.+|. ..+++++|+..|+++.+. +++.+.+++|.+|.. .|
T Consensus 407 ~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g--- 481 (681)
T 2pzi_A 407 PVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALL-DLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL-TG--- 481 (681)
T ss_dssp HHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HT---
T ss_pred HHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHH-hcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-cC---
Confidence 789999999988 3 467899999999998 678999999999999865 689999999999974 23
Q ss_pred CccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc--CCHHHHHh
Q 018965 149 NEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR--EFFQSVSK 210 (348)
Q Consensus 149 ~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~--G~~~A~~~ 210 (348)
++++|+..|++|.+. +++.+.++||.+|.. ..++++ +.+|++|.+. .++.+..+
T Consensus 482 ---~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~----~g~~~~-~~~~~~al~~~P~~~~a~~~ 539 (681)
T 2pzi_A 482 ---DYDSATKHFTEVLDTFPGELAPKLALAATAEL----AGNTDE-HKFYQTVWSTNDGVISAAFG 539 (681)
T ss_dssp ---CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH----HTCCCT-TCHHHHHHHHCTTCHHHHHH
T ss_pred ---CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH----cCChHH-HHHHHHHHHhCCchHHHHHH
Confidence 789999999999865 789999999998875 234555 6777777654 34555544
No 138
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.24 E-value=0.01 Score=53.67 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=72.0
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++
T Consensus 135 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~------~~~~ 206 (359)
T 3ieg_A 135 DYTAAITFLDKILEVCVWDAELRELRAECFI-KEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQ-LG------DHEL 206 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHH-HT------CHHH
T ss_pred CHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC------CHHH
Confidence 378999999998775 58899999999998 678999999999999876 478999999999974 23 7899
Q ss_pred HHHHHHHHHhC--CCHHHHHHH
Q 018965 156 GVALCARAASI--GHVDAVREL 175 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~L 175 (348)
|+.+|+++.+. .+..+...+
T Consensus 207 A~~~~~~a~~~~~~~~~~~~~~ 228 (359)
T 3ieg_A 207 SLSEVRECLKLDQDHKRCFAHY 228 (359)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHhhCccchHHHHHH
Confidence 99999999864 344444333
No 139
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.24 E-value=0.0047 Score=56.80 Aligned_cols=112 Identities=13% Similarity=-0.022 Sum_probs=91.0
Q ss_pred cHHHHHHHHHHHHHCC--CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCH----HHHHHHHHHHHccCCCCCCccCH
Q 018965 80 WSDSAHRFLKRCVFAG--NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHA----PALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G--~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~----~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
-+++|.+.|......+ ++ ++|.+|.+++ ..++...|+..|+++....++ .+.|.||.++.. .| ++
T Consensus 117 ~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~-~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~-LG------~~ 187 (282)
T 4f3v_A 117 NYADAMEALEAAPVAGSEHL-VAWMKAVVYG-AAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN-LA------LF 187 (282)
T ss_dssp CHHHHHHHHTSSCCTTCHHH-HHHHHHHHHH-HTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH-TT------CH
T ss_pred CHHHHHHHHHHHHhcCCchH-HHHHHHHHHH-HcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH-CC------CH
Confidence 3889999998876544 35 9999999888 789999999999988766544 489999999853 44 78
Q ss_pred HHHHHHHHHHHhCC-----CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 154 RAGVALCARAASIG-----HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 154 ~~A~~~~~kAA~~G-----~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
.+|+.||+++.... .+++++++|.++.. .-+.++|...|+++.....
T Consensus 188 ~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~----lGr~deA~~~l~~a~a~~P 239 (282)
T 4f3v_A 188 TEAERRLTEANDSPAGEACARAIAWYLAMARRS----QGNESAAVALLEWLQTTHP 239 (282)
T ss_dssp HHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCC
Confidence 99999999998655 45799999998865 3388999999999987644
No 140
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.24 E-value=0.0014 Score=63.03 Aligned_cols=60 Identities=15% Similarity=0.078 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQF 141 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~ 141 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.
T Consensus 320 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 383 (514)
T 2gw1_A 320 YDQAGKDFDKAKELDPENIFPYIQLACLAY-RENKFDDCETLFSEAKRKFPEAPEVPNFFAEILT 383 (514)
T ss_dssp TTHHHHHHHHHHHTCSSCSHHHHHHHHHTT-TTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChhhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHH
Confidence 34555555555443 24445555555544 334455555555554433 23444445554443
No 141
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.23 E-value=0.0014 Score=51.62 Aligned_cols=79 Identities=18% Similarity=0.044 Sum_probs=68.4
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+..|+++.+. .++++.+.||.++. ..++.++|+..|++|.+. .++.+.+.||.+|.. ..+.++
T Consensus 32 ~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~-------~g~~~~ 103 (121)
T 1hxi_A 32 NLAEAALAFEAVCQKEPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-------EHNANA 103 (121)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-------HHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-------cCCHHH
Confidence 378999999999875 69999999999998 678999999999999986 489999999999964 237899
Q ss_pred HHHHHHHHHhC
Q 018965 156 GVALCARAASI 166 (348)
Q Consensus 156 A~~~~~kAA~~ 166 (348)
|+.+|+++.+.
T Consensus 104 A~~~~~~al~~ 114 (121)
T 1hxi_A 104 ALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHHh
Confidence 99999998765
No 142
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.0023 Score=48.02 Aligned_cols=77 Identities=9% Similarity=0.051 Sum_probs=61.3
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CC---
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GH--- 168 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~--- 168 (348)
++++.+.+|..++ ..+++++|+.+|++|.+. .++.+.+++|.+|.. .| ++++|+.+|+++.+. .+
T Consensus 3 ~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g------~~~~A~~~~~~al~~~p~~~~~ 74 (111)
T 2l6j_A 3 QFEKQKEQGNSLF-KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LG------EYTQAIQMCQQGLRYTSTAEHV 74 (111)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHTSCSSTTSH
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hc------CHHHHHHHHHHHHHhCCCccHH
Confidence 4677888998887 678999999999999875 478899999999864 23 789999999999876 34
Q ss_pred ---HHHHHHHHHHHh
Q 018965 169 ---VDAVRELGHCLQ 180 (348)
Q Consensus 169 ---~~A~~~Lg~~y~ 180 (348)
..+.+.+|.++.
T Consensus 75 ~~~~~~~~~~~~~~~ 89 (111)
T 2l6j_A 75 AIRSKLQYRLELAQG 89 (111)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 667777777664
No 143
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.20 E-value=0.0005 Score=53.39 Aligned_cols=84 Identities=17% Similarity=0.221 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHCC-----CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCH
Q 018965 81 SDSAHRFLKRCVFAG-----NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G-----~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
.++|+.+|+++.+.+ ++.+.+.||.+|. ..+++++|+.+|++|.+. .++.+.+.||.+|.. .| ++
T Consensus 6 ~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g------~~ 77 (117)
T 3k9i_A 6 EAQAVPYYEKAIASGLQGKDLAECYLGLGSTFR-TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LG------RY 77 (117)
T ss_dssp -CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HT------CH
T ss_pred HHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cC------CH
Confidence 457889999999875 4578999999998 678999999999999876 589999999999964 23 78
Q ss_pred HHHHHHHHHHHhC--CCHHHH
Q 018965 154 RAGVALCARAASI--GHVDAV 172 (348)
Q Consensus 154 ~~A~~~~~kAA~~--G~~~A~ 172 (348)
++|+.+|+++.+. .++...
T Consensus 78 ~~A~~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 78 EQGVELLLKIIAETSDDETIQ 98 (117)
T ss_dssp HHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999765 444443
No 144
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.18 E-value=0.0047 Score=59.31 Aligned_cols=115 Identities=5% Similarity=-0.114 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCC-----------------------------
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSH----------------------------- 129 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~----------------------------- 129 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+..|+++.+.+.
T Consensus 55 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (514)
T 2gw1_A 55 LKKVVEMSTKALELKPDYSKVLLRRASANE-GLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDI 133 (514)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHhccChHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888765 57888899998887 56788889888888876653
Q ss_pred ----------------------------------------------------HHHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 130 ----------------------------------------------------APALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 130 ----------------------------------------------------~~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
+.+.+.+|.++..-. ...++++|+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~A~ 209 (514)
T 2gw1_A 134 DTATATPTELSTQPAKERKDKQENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKR----SPESYDKAD 209 (514)
T ss_dssp -----------------------CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSC----CTTHHHHHH
T ss_pred HHHHHhhhhccCChhhHHHhhccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhh----hhccHHHHH
Confidence 566677776665310 123788889
Q ss_pred HHHHHHHh----------------CCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 158 ALCARAAS----------------IGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 158 ~~~~kAA~----------------~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
.+|+++.+ ..++.+.+.+|.+|.. ..+..+|+.+|+++.+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~~l~~~~ 268 (514)
T 2gw1_A 210 ESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL----KNDPLGAHEDIKKAIELFP 268 (514)
T ss_dssp HHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH----SSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhhCc
Confidence 99988887 3456788888888765 4578889999988877654
No 145
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.18 E-value=0.0019 Score=61.94 Aligned_cols=116 Identities=15% Similarity=0.107 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhh--hccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRF--YCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLR 154 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~--~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~ 154 (348)
+++|+.+|++|.+. .++++.+.+|.++. +...+..+|++.|++|.+. .++.+.+.||..+..-.. ...+..
T Consensus 154 y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~---~~~~~~ 230 (472)
T 4g1t_A 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMRE---EGEEEG 230 (472)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC---------C
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHh---hhhHHH
Confidence 78999999999875 68999999998865 4556677899999999865 478889999987754322 345788
Q ss_pred HHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 155 AGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 155 ~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
+|..+|+++.+. .++.+.++||.+|.. ..+..+|+..|++|.+..
T Consensus 231 ~a~~~~~~al~~~~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 277 (472)
T 4g1t_A 231 EGEKLVEEALEKAPGVTDVLRSAAKFYRR----KDEPDKAIELLKKALEYI 277 (472)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHH----cCchHHHHHHHHHHHHhC
Confidence 999999999764 689999999999986 568999999999998754
No 146
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.17 E-value=0.0032 Score=54.74 Aligned_cols=118 Identities=7% Similarity=-0.064 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHCC--C---HHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CH---HHHHHHHHHHHcc-------
Q 018965 81 SDSAHRFLKRCVFAG--N---LEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HA---PALYSLAVIQFNG------- 143 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G--~---~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~---~A~~~Lg~~y~~G------- 143 (348)
.++|+..|+++.+.. + +++.+.+|.+|+ ..++.++|+..|+++.+.. ++ .|.|.+|.+|..-
T Consensus 20 ~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~ 98 (225)
T 2yhc_A 20 WRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQG 98 (225)
T ss_dssp HHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhh
Confidence 789999999998742 3 479999999998 6789999999999998753 33 4899999998641
Q ss_pred ---CCC-CCCccCHHHHHHHHHHHHhC--CCHHHH-----------------HHHHHHHhccCCCCCCHHHHHHHHHHHH
Q 018965 144 ---SGG-GKNEKDLRAGVALCARAASI--GHVDAV-----------------RELGHCLQDGYGVRQNIEKGRRLLIEAN 200 (348)
Q Consensus 144 ---~g~-~~~~~d~~~A~~~~~kAA~~--G~~~A~-----------------~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa 200 (348)
.+. .....+.++|+..|+++.+. .++.+. +.+|.+|.. ..++.+|+..|+++.
T Consensus 99 ~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~l 174 (225)
T 2yhc_A 99 FFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTE----RGAWVAVVNRVEGML 174 (225)
T ss_dssp ---------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHH
T ss_pred hhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cCcHHHHHHHHHHHH
Confidence 010 00134789999999999875 333222 566777665 569999999999998
Q ss_pred hcC
Q 018965 201 ARE 203 (348)
Q Consensus 201 ~~G 203 (348)
+.-
T Consensus 175 ~~~ 177 (225)
T 2yhc_A 175 RDY 177 (225)
T ss_dssp HHS
T ss_pred HHC
Confidence 763
No 147
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.16 E-value=0.0057 Score=55.31 Aligned_cols=110 Identities=12% Similarity=-0.017 Sum_probs=83.8
Q ss_pred cHHHHHHHHHHHHHCC--CHH------HHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHcc
Q 018965 80 WSDSAHRFLKRCVFAG--NLE------ACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNG 143 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G--~~~------A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G 143 (348)
..++|...++++.+.- +++ ..+.+|.+|. ...+.++|+.+|++|.+. ++ ..+..+||.+|..
T Consensus 90 ~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~- 167 (293)
T 3u3w_A 90 RYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE- 167 (293)
T ss_dssp CHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHH-cccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH-
Confidence 3789999999987743 333 2224666665 566999999999999873 23 3478999999964
Q ss_pred CCCCCCccCHHHHHHHHHHHHh----C-C----CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 144 SGGGKNEKDLRAGVALCARAAS----I-G----HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 144 ~g~~~~~~d~~~A~~~~~kAA~----~-G----~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
.| ++++|+.+|++|.+ . + ...+.++||.+|.. ..++++|+.++++|.+
T Consensus 168 ~g------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~----~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 168 NG------YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL----DSRYEESLYQVNKAIE 224 (293)
T ss_dssp TT------CHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred cC------CHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH----HhHHHHHHHHHHHHHH
Confidence 33 78999999999984 1 2 34578999999876 5699999999999975
No 148
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.15 E-value=0.00067 Score=57.02 Aligned_cols=51 Identities=14% Similarity=0.233 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhC--CCHHHHHHHHHHHhc-cCCCCC------CHHHHHHHHHHHHhcC
Q 018965 153 LRAGVALCARAASI--GHVDAVRELGHCLQD-GYGVRQ------NIEKGRRLLIEANARE 203 (348)
Q Consensus 153 ~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~-G~Gv~~------d~~~A~~w~~~Aa~~G 203 (348)
+++|+..|++|.+. .+.+|.|+||..|.. |.-+|. ++++|+.+|++|.+..
T Consensus 62 ~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhC
Confidence 45555566655543 355566666655542 222332 6777777777777654
No 149
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.15 E-value=0.0011 Score=55.59 Aligned_cols=84 Identities=6% Similarity=-0.002 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhh--hcc-------CCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHc-cCCC
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRF--YCL-------QNRSSGTSLMAKAAMKS--HAPALYSLAVIQFN-GSGG 146 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~--~~~-------~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~-G~g~ 146 (348)
.++|+..++++.+. +++++.+++|.++. +.. ...++|+..|++|.+.. +++|+|+||..|.. |.-
T Consensus 18 feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l- 96 (158)
T 1zu2_A 18 FEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFL- 96 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhccc-
Confidence 68899999998875 69999999999887 211 23679999999999876 89999999999964 322
Q ss_pred CCCcc------CHHHHHHHHHHHHhCC
Q 018965 147 GKNEK------DLRAGVALCARAASIG 167 (348)
Q Consensus 147 ~~~~~------d~~~A~~~~~kAA~~G 167 (348)
+|. ++++|+.+|++|.+..
T Consensus 97 --~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 97 --TPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --CcchhhhhccHHHHHHHHHHHHHhC
Confidence 222 7899999999998764
No 150
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.15 E-value=0.0059 Score=55.19 Aligned_cols=110 Identities=11% Similarity=-0.024 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHCCC--H------HHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFAGN--L------EACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~--~------~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G~ 144 (348)
.++|+.+++++.+... . ...+.+|.+|. ...++++|+.+|++|.+. .+ ..+.+++|.+|.. .
T Consensus 91 y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~-~ 168 (293)
T 2qfc_A 91 YKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE-N 168 (293)
T ss_dssp HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH-TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH-c
Confidence 7899999998877532 2 34556666665 556999999999999853 12 5689999999974 3
Q ss_pred CCCCCccCHHHHHHHHHHHHh----C-CC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 145 GGGKNEKDLRAGVALCARAAS----I-GH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~----~-G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
| ++++|+.+|++|.+ . ++ +.+.+++|.+|.. ..++++|+.+|++|.+.
T Consensus 169 ~------~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~----~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 169 G------YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL----DSRYEESLYQVNKAIEI 225 (293)
T ss_dssp T------CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred C------CHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH----HhhHHHHHHHHHHHHHH
Confidence 3 78999999999973 2 22 2689999999975 67999999999999764
No 151
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.14 E-value=0.0023 Score=62.47 Aligned_cols=109 Identities=11% Similarity=0.054 Sum_probs=85.7
Q ss_pred HHHHHHHHHHH--CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CC---------------HHHHHHHHHHHHcc
Q 018965 83 SAHRFLKRCVF--AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SH---------------APALYSLAVIQFNG 143 (348)
Q Consensus 83 ~A~~~~~kaA~--~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~---------------~~A~~~Lg~~y~~G 143 (348)
+|..+|+++.+ ..++.+.+.+|..|+ ..+++.+|+.+|++|.+. .+ ..++++||.+|..
T Consensus 252 ~A~~~~~~~~~~~~~~a~~~~~~G~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~- 329 (457)
T 1kt0_A 252 KAKESWEMDTKEKLEQAAIVKEKGTVYF-KGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLK- 329 (457)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cCcchhhcCHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 34444444332 245678888999988 678999999999999864 34 6899999999974
Q ss_pred CCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 144 SGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 144 ~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
..++.+|+.+|.+|.+. .++.+.+++|.+|.. ..++++|+.+|++|.+..
T Consensus 330 ------~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~----~g~~~~A~~~~~~al~l~ 381 (457)
T 1kt0_A 330 ------LREYTKAVECCDKALGLDSANEKGLYRRGEAQLL----MNEFESAKGDFEKVLEVN 381 (457)
T ss_dssp ------TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred ------hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhC
Confidence 23789999999999874 689999999998876 458999999999998764
No 152
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.13 E-value=0.0019 Score=60.55 Aligned_cols=110 Identities=14% Similarity=0.099 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHC----C----CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFA----G----NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G----~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G~ 144 (348)
.++|+.+|+++.+. + ...+.+.+|.+|. ..+++++|+.+|+++.+. ++ ..+.+.||.+|.. .
T Consensus 199 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~ 276 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIF-L 276 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH-C
Confidence 57888888887653 2 3458889999988 678999999999999764 33 2388899999964 2
Q ss_pred CCCCCccCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 145 GGGKNEKDLRAGVALCARAASI----GH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~~----G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.++.+|..+|+++.+. ++ ..+.+.||.+|.. ..+.++|+.+|++|.+.
T Consensus 277 ------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 332 (411)
T 4a1s_A 277 ------GQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTL----LHEFNTAIEYHNRHLAI 332 (411)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred ------cCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 3789999999998764 33 6788999998875 45899999999998764
No 153
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.13 E-value=0.003 Score=46.96 Aligned_cols=81 Identities=9% Similarity=-0.093 Sum_probs=67.9
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC----CHHHHHHHHHHHHccCCCCCCccCH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS----HAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G----~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
..++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+.. ++.+.+.+|.+|.. . +.+.
T Consensus 21 ~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~-~-----~~~~ 93 (112)
T 2kck_A 21 NYTESIDLFEKAIQLDPEESKYWLMKGKALY-NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY-I-----EGKE 93 (112)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT-C-----SSCS
T ss_pred hHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-H-----hCCH
Confidence 378999999998875 57899999999998 5678999999999999864 78999999999964 2 0377
Q ss_pred HHHHHHHHHHHhCC
Q 018965 154 RAGVALCARAASIG 167 (348)
Q Consensus 154 ~~A~~~~~kAA~~G 167 (348)
++|.++|+++.+..
T Consensus 94 ~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 94 VEAEIAEARAKLEH 107 (112)
T ss_dssp HHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhhcc
Confidence 99999999987653
No 154
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.12 E-value=0.0018 Score=60.74 Aligned_cols=113 Identities=15% Similarity=0.115 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHC----CC----HHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCC--------HHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFA----GN----LEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSH--------APALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G~----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~--------~~A~~~Lg~~y~~G~ 144 (348)
.++|..+|+++.+. ++ ..+.+.+|.+|. ..++.++|+.+|+++.+... ..+.+.||.+|.. .
T Consensus 239 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~ 316 (411)
T 4a1s_A 239 FQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHI-FLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTL-L 316 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T
T ss_pred hHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-c
Confidence 78899999988764 34 238889999988 67899999999999876532 6788999999964 3
Q ss_pred CCCCCccCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCH
Q 018965 145 GGGKNEKDLRAGVALCARAASI----GH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFF 205 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~~----G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~ 205 (348)
| ++++|..+|+++.+. ++ ..+.+.||.+|.. ..|.++|..+|++|.+.-..
T Consensus 317 g------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~~~ 375 (411)
T 4a1s_A 317 H------EFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSA----IGGHERALKYAEQHLQLAXX 375 (411)
T ss_dssp T------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCH
T ss_pred C------CHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHHhh
Confidence 3 789999999998764 33 5588999998875 45899999999999876554
No 155
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.12 E-value=0.0016 Score=54.48 Aligned_cols=108 Identities=12% Similarity=0.072 Sum_probs=81.9
Q ss_pred HHHHHH---HHHHHHHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHh------C--CCHHHHHHHHHHHHccCCCCCC
Q 018965 81 SDSAHR---FLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAM------K--SHAPALYSLAVIQFNGSGGGKN 149 (348)
Q Consensus 81 ~~~A~~---~~~kaA~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~------~--G~~~A~~~Lg~~y~~G~g~~~~ 149 (348)
.++|.. ++.. .....+.+.+.+|.+|. ..+++++|+.+|++|.+ . ..+.+.++||.+|.. .|
T Consensus 8 ~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g---- 80 (203)
T 3gw4_A 8 YALAERQAQALLA-HPATASGARFMLGYVYA-FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM-AG---- 80 (203)
T ss_dssp HHHHHHHHHHHHT-STTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TT----
T ss_pred HHHHHHHHHHhcC-ChHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH-cC----
Confidence 556666 4422 11245788999999988 67899999999999987 2 245688899999864 33
Q ss_pred ccCHHHHHHHHHHHHhC----C-C----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 150 EKDLRAGVALCARAASI----G-H----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 150 ~~d~~~A~~~~~kAA~~----G-~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
++++|..+|++|.+. | + ..+.++||.+|.. ..++++|+.+|++|.+
T Consensus 81 --~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 135 (203)
T 3gw4_A 81 --NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALH----FGDLAGARQEYEKSLV 135 (203)
T ss_dssp --CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHH
Confidence 789999999998764 4 3 4578899998875 3589999999999874
No 156
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.09 E-value=0.0051 Score=59.61 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHCC-CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 81 SDSAHRFLKRCVFAG-NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G-~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
.++|..+|+++.+.. ++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++|.
T Consensus 259 ~~~A~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~------~~~~A~ 330 (537)
T 3fp2_A 259 LLDAQVLLQESINLHPTPNSYIFLALTLA-DKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFI-LQ------DYKNAK 330 (537)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHTC-CSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHH-HhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh-cC------CHHHHH
Confidence 455555555554432 2445555555554 344455555555555443 244555555555532 11 445555
Q ss_pred HHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 158 ALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 158 ~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.+|+++.+. .++.+.+.+|.+|.. ..+.++|+.+|+++.+.
T Consensus 331 ~~~~~a~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~ 373 (537)
T 3fp2_A 331 EDFQKAQSLNPENVYPYIQLACLLYK----QGKFTESEAFFNETKLK 373 (537)
T ss_dssp HHHHHHHHHCTTCSHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 555555432 334455555554443 23445555555554433
No 157
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.07 E-value=0.0062 Score=47.01 Aligned_cols=88 Identities=18% Similarity=0.202 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHC--CCH---HHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CC---HHHHHHHHHHHHccCCCCCCc
Q 018965 81 SDSAHRFLKRCVFA--GNL---EACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SH---APALYSLAVIQFNGSGGGKNE 150 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~---~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~---~~A~~~Lg~~y~~G~g~~~~~ 150 (348)
.++|...|+++.+. +++ .+.+.+|.+|. ..+++++|+.+|+++.+. .+ +.+.+.+|.+|.. .|
T Consensus 18 ~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-~g----- 90 (129)
T 2xev_A 18 YDDASQLFLSFLELYPNGVYTPNALYWLGESYY-ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-EG----- 90 (129)
T ss_dssp HHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TT-----
T ss_pred HHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-cC-----
Confidence 78999999998874 456 79999999998 678999999999999875 45 8899999999974 34
Q ss_pred cCHHHHHHHHHHHHhC--CCHHHHHHHH
Q 018965 151 KDLRAGVALCARAASI--GHVDAVRELG 176 (348)
Q Consensus 151 ~d~~~A~~~~~kAA~~--G~~~A~~~Lg 176 (348)
++++|..+|+++.+. .++.+...+.
T Consensus 91 -~~~~A~~~~~~~~~~~p~~~~~~~a~~ 117 (129)
T 2xev_A 91 -KNTEAQQTLQQVATQYPGSDAARVAQE 117 (129)
T ss_dssp -CHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHCCCChHHHHHHH
Confidence 789999999999875 3444444333
No 158
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.05 E-value=0.0027 Score=52.81 Aligned_cols=110 Identities=8% Similarity=-0.057 Sum_probs=81.8
Q ss_pred cHHHHHHHHHHHHHCC-CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 80 WSDSAHRFLKRCVFAG-NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G-~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
..++|+..|+++.+.. ++.....++.+......+...|+..|+++.+. +++.+.+.||.+|.. .| ++++|
T Consensus 55 ~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~-~g------~~~~A 127 (176)
T 2r5s_A 55 QFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQ-VG------RDEEA 127 (176)
T ss_dssp CHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred CHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cc------cHHHH
Confidence 3789999999987655 56666555655431111223478999999876 589999999999964 33 78999
Q ss_pred HHHHHHHHhCC----CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Q 018965 157 VALCARAASIG----HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEAN 200 (348)
Q Consensus 157 ~~~~~kAA~~G----~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa 200 (348)
...|+++.+.. ++.+.+.||.+|.. ..+..+|...|+++.
T Consensus 128 ~~~~~~~l~~~p~~~~~~a~~~l~~~~~~----~g~~~~A~~~y~~al 171 (176)
T 2r5s_A 128 LELLWNILKVNLGAQDGEVKKTFMDILSA----LGQGNAIASKYRRQL 171 (176)
T ss_dssp HHHHHHHHTTCTTTTTTHHHHHHHHHHHH----HCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcccChHHHHHHHHHHHHH----hCCCCcHHHHHHHHH
Confidence 99999999864 36699999998874 235678899998875
No 159
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.05 E-value=0.0036 Score=51.12 Aligned_cols=91 Identities=9% Similarity=0.013 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHC--------------------CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA--------------------GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAV 138 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--------------------G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~ 138 (348)
.++|+..|++|.+. .++.+.+++|.+|+ ..+++.+|+.++++|.+. .++.+.+.+|.
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 105 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL-NIGDLHEAEETSSEVLKREETNEKALFRRAK 105 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 67888888888765 45579999999998 567999999999999875 58999999999
Q ss_pred HHHccCCCCCCccCHHHHHHHHHHHHhCC--CH-HHHHHHHHHH
Q 018965 139 IQFNGSGGGKNEKDLRAGVALCARAASIG--HV-DAVRELGHCL 179 (348)
Q Consensus 139 ~y~~G~g~~~~~~d~~~A~~~~~kAA~~G--~~-~A~~~Lg~~y 179 (348)
+|.. .| ++.+|+.+|++|.+.. ++ .....|+.+.
T Consensus 106 ~~~~-~g------~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 106 ARIA-AW------KLDEAEEDLKLLLRNHPAAASVVAREMKIVT 142 (162)
T ss_dssp HHHH-TT------CHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred HHHH-Hh------cHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 9964 34 7899999999998763 44 3344555443
No 160
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=97.00 E-value=0.003 Score=59.05 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=77.4
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCH-------------------HHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHA-------------------PALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~-------------------~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
+.+.+.+|..++ ..+++.+|+.+|++|.+.... .+.++||.+|.. . .++.+|+
T Consensus 179 a~~~~~~g~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~------g~~~~A~ 250 (338)
T 2if4_A 179 ADRRKMDGNSLF-KEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-L------KRYDEAI 250 (338)
T ss_dssp HHHHHHHHHHTC-SSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-T------TCCHHHH
T ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-c------CCHHHHH
Confidence 456888898887 678899999999999876543 378899999964 2 3679999
Q ss_pred HHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 158 ALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 158 ~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.+|++|.+. .++.+.+++|.+|.. ..++++|+.+|++|.+.
T Consensus 251 ~~~~~al~~~p~~~~a~~~lg~a~~~----~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 251 GHCNIVLTEEEKNPKALFRRGKAKAE----LGQMDSARDDFRKAQKY 293 (338)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHT----TTCHHHHHHHHHHTTC-
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 999999874 689999999999986 56899999999999654
No 161
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.98 E-value=0.0018 Score=63.70 Aligned_cols=106 Identities=12% Similarity=0.085 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|++|.+. .++.+++++|.+|. ..+++++|+.+|++|.+. .++.+.++||.+|.. .| ++++|
T Consensus 22 ~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g------~~~eA 93 (477)
T 1wao_1 22 YENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LG------KFRAA 93 (477)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC------CHHHH
Confidence 78999999998875 47889999999988 677899999999999876 478899999999864 23 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHH--HhccCCCCCCHHHHHHHHHH
Q 018965 157 VALCARAASI--GHVDAVRELGHC--LQDGYGVRQNIEKGRRLLIE 198 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~--y~~G~Gv~~d~~~A~~w~~~ 198 (348)
..+|++|.+. .+..+.+.++.+ +.. ..+.++|+..|++
T Consensus 94 ~~~~~~al~~~p~~~~~~~~l~~~~~~~~----~g~~~~A~~~~~~ 135 (477)
T 1wao_1 94 LRDYETVVKVKPHDKDAKMKYQECNKIVK----QKAFERAIAGDEH 135 (477)
T ss_dssp HHHHHHHHHHSTTCTTHHHHHHHHHHHHH----HHHHCCC------
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHH----HHHHHHHhccccc
Confidence 9999999874 567788888877 443 2466667766664
No 162
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.96 E-value=0.0038 Score=59.36 Aligned_cols=92 Identities=16% Similarity=0.083 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHH------------------CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVF------------------AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQ 140 (348)
Q Consensus 81 ~~~A~~~~~kaA~------------------~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y 140 (348)
.++|+..|++|.+ ..++.+++++|.+|+ ..+++++|+.+|++|.+. .++.+.+.+|.+|
T Consensus 239 ~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 317 (370)
T 1ihg_A 239 WEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQGAVDSCLEALEIDPSNTKALYRRAQGW 317 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 6788888888876 246788999999998 678999999999999986 4799999999999
Q ss_pred HccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHh
Q 018965 141 FNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQ 180 (348)
Q Consensus 141 ~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~ 180 (348)
.. .| ++++|+.+|++|.+. .+..+...|+.++.
T Consensus 318 ~~-~g------~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~ 352 (370)
T 1ihg_A 318 QG-LK------EYDQALADLKKAQEIAPEDKAIQAELLKVKQ 352 (370)
T ss_dssp HH-TT------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HH-cc------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 74 23 789999999999875 57888888888775
No 163
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.96 E-value=0.0035 Score=52.68 Aligned_cols=94 Identities=7% Similarity=-0.085 Sum_probs=73.7
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCH--------------HHHHHHHHHHHccCCCCCCccCHHHHHHHHH
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHA--------------PALYSLAVIQFNGSGGGKNEKDLRAGVALCA 161 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~--------------~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~ 161 (348)
..+..+.+|..++ ..+++++|+..|++|.+.... .+++++|.++.. .| ++++|+..|.
T Consensus 10 ~a~~~~~~G~~l~-~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lg------r~~eAl~~~~ 81 (159)
T 2hr2_A 10 GAYLALSDAQRQL-VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LR------SFDEALHSAD 81 (159)
T ss_dssp HHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TT------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CC------CHHHHHHHHH
Confidence 3455677777776 567899999999999876422 288999988854 33 6888999999
Q ss_pred HHHhC---------CCHHHH----HHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 162 RAASI---------GHVDAV----RELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 162 kAA~~---------G~~~A~----~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
+|.+. .++.|. |++|..+.. -.++++|+..|++|.+
T Consensus 82 kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~----lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 82 KALHYFNRRGELNQDEGKLWISAVYSRALALDG----LGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHhhhccccCCCchHHHHHHHHHhHHHHHHH----CCCHHHHHHHHHHHHh
Confidence 98865 677788 999998875 4589999999999975
No 164
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.95 E-value=0.0045 Score=47.45 Aligned_cols=73 Identities=21% Similarity=0.324 Sum_probs=59.6
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC---------CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK---------SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI 166 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~---------G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~ 166 (348)
+++-+|.||..++ ..+++..|+.||++|.+. ..+...+.||.+|.. .| ++++|+.++++|.+.
T Consensus 4 sa~dc~~lG~~~~-~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g------~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 4 TAEDCFELGKVAY-TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QG------DLDKALLLTKKLLEL 75 (104)
T ss_dssp CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-cc------CHHHHHHHHHHHHhc
Confidence 4677899999988 788999999999999974 246778899999863 33 789999999999764
Q ss_pred --CCHHHHHHHH
Q 018965 167 --GHVDAVRELG 176 (348)
Q Consensus 167 --G~~~A~~~Lg 176 (348)
.+..+..+++
T Consensus 76 ~P~~~~~~~n~~ 87 (104)
T 2v5f_A 76 DPEHQRANGNLK 87 (104)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHhhHH
Confidence 5788888877
No 165
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.94 E-value=0.005 Score=47.15 Aligned_cols=76 Identities=14% Similarity=0.061 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHH
Q 018965 116 SGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEK 191 (348)
Q Consensus 116 ~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~ 191 (348)
.++.+|+++.+. .++.+.+.||.+|.. .| ++++|+.+|+++.+. .++.+.+.||.+|.. ..+.++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~-~g------~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~g~~~~ 71 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAE-HE------QFDAALPHLRAALDFDPTYSVAWKWLGKTLQG----QGDRAG 71 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----HTCHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cc------CHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH----cCCHHH
Confidence 578889998775 479999999999964 23 789999999999875 678999999999876 458999
Q ss_pred HHHHHHHHHhc
Q 018965 192 GRRLLIEANAR 202 (348)
Q Consensus 192 A~~w~~~Aa~~ 202 (348)
|+.+|++|.+.
T Consensus 72 A~~~~~~al~~ 82 (115)
T 2kat_A 72 ARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999753
No 166
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.93 E-value=0.0016 Score=64.11 Aligned_cols=95 Identities=8% Similarity=-0.046 Sum_probs=78.8
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHH
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAV 172 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~ 172 (348)
+++.+.+|..|+ ..+++++|+.+|++|.+.. ++.+.+++|.+|.. . .++++|+.+|++|.+. .++.+.
T Consensus 6 a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~-~------g~~~~A~~~~~~al~l~p~~~~~~ 77 (477)
T 1wao_1 6 AEELKTQANDYF-KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-T------ECYGYALGDATRAIELDKKYIKGY 77 (477)
T ss_dssp HTTSSSSSSSTT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-T------TCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-h------cCHHHHHHHHHHHHHhCCCCHHHH
Confidence 345677888887 6789999999999998764 68899999999964 2 3789999999999886 578999
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 173 RELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 173 ~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
++||.+|.. ..+.++|+.+|++|.+..
T Consensus 78 ~~lg~~~~~----~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 78 YRRAASNMA----LGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHH----HTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 999998875 458999999999998763
No 167
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.92 E-value=0.0072 Score=47.18 Aligned_cols=78 Identities=14% Similarity=0.024 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. +++.+.+.||.+|.. .| ++.+|
T Consensus 25 ~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~------~~~~A 96 (137)
T 3q49_B 25 YPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-ME------SYDEA 96 (137)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHHhhCcCcHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-Hh------hHHHH
Confidence 78999999998875 57899999999998 678999999999999875 478999999999974 23 78999
Q ss_pred HHHHHHHHhC
Q 018965 157 VALCARAASI 166 (348)
Q Consensus 157 ~~~~~kAA~~ 166 (348)
..+|+++.+.
T Consensus 97 ~~~~~~a~~~ 106 (137)
T 3q49_B 97 IANLQRAYSL 106 (137)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 168
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.91 E-value=0.015 Score=53.77 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHC----CC----HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFA----GN----LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G~----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G~ 144 (348)
.++|..+|+++.+. ++ ..+.+.+|.+|. ..++.++|+.+|+++.+. ++ ..+.+.+|.+|.. .
T Consensus 203 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~ 280 (406)
T 3sf4_A 203 FRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL-L 280 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHH-h
Confidence 67888888887653 33 237888888887 567888999999888743 33 5677888888863 2
Q ss_pred CCCCCccCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 145 GGGKNEKDLRAGVALCARAASI----GH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~~----G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
| ++++|..+|++|.+. ++ ..+.+.||.+|.. ..|+++|+.+|++|.+.
T Consensus 281 g------~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 336 (406)
T 3sf4_A 281 Q------DYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTA----LGNHDQAMHFAEKHLEI 336 (406)
T ss_dssp T------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred C------cHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 3 788999999888653 44 6678888888875 45889999999988654
No 169
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.89 E-value=0.0031 Score=58.92 Aligned_cols=110 Identities=9% Similarity=0.027 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHCCCH-------------------HHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNL-------------------EACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVI 139 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~-------------------~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~ 139 (348)
.++|+..|++|.+.... .++++||.+|+ ..+++.+|+.+|++|.+. .++.+++++|.+
T Consensus 195 ~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a 273 (338)
T 2if4_A 195 LEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLI-KLKRYDEAIGHCNIVLTEEEKNPKALFRRGKA 273 (338)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 67889999998876543 37889999988 677899999999999875 579999999999
Q ss_pred HHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 140 QFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 140 y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
|.. .| ++++|..+|++|.+. .+..+...|+.+... .....+++..+|+++..
T Consensus 274 ~~~-~g------~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~---~~~~~~~a~~~~~~~l~ 327 (338)
T 2if4_A 274 KAE-LG------QMDSARDDFRKAQKYAPDDKAIRRELRALAEQ---EKALYQKQKEMYKGIFK 327 (338)
T ss_dssp HHT-TT------CHHHHHHHHHHTTC--------------------------------------
T ss_pred HHH-cC------CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhC
Confidence 964 33 799999999999754 678888888887543 23345566667766643
No 170
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=96.89 E-value=0.0059 Score=58.37 Aligned_cols=119 Identities=13% Similarity=0.070 Sum_probs=86.8
Q ss_pred cHHHHHHHHHHHHHC----------CCHHHHHHhhhhhh-hccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHc-cCC
Q 018965 80 WSDSAHRFLKRCVFA----------GNLEACYTLGMIRF-YCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFN-GSG 145 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~----------G~~~A~~~Lg~~y~-~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~-G~g 145 (348)
..++|..+|+++.+. ..++....+|..+. ...+++++|+.+|++|.+. .++.+.+.+|.++.. +.-
T Consensus 109 ~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~ 188 (472)
T 4g1t_A 109 RLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW 188 (472)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS
T ss_pred ChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc
Confidence 378999999988653 45778888887765 3457899999999999875 589999999987642 211
Q ss_pred CCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 146 GGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 146 ~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
.+..+|++.|++|.+. .++.+...||..+..=.-...+..+|..+|++|....
T Consensus 189 -----~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~ 243 (472)
T 4g1t_A 189 -----PPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKA 243 (472)
T ss_dssp -----CCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHC
T ss_pred -----hHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhC
Confidence 2446788999998764 6788999999877654444567889999999987654
No 171
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.88 E-value=0.0031 Score=57.28 Aligned_cols=111 Identities=10% Similarity=0.019 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|...|+++.+. +++++.+.||.+|. ..++.++|+.+|+++.... +......++..+... + +...|
T Consensus 133 ~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~-~------~~~~a 204 (287)
T 3qou_A 133 YTDALPLLXDAWQLSNQNGEIGLLLAETLI-ALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQ-A------ADTPE 204 (287)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHH-HTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHH-H------TSCHH
T ss_pred HHHHHHHHHHHHHhCCcchhHHHHHHHHHH-HCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhh-c------ccCcc
Confidence 67777788776553 57788888888777 5667788888887775532 222333333333221 1 23457
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
+..|+++.+. +++.+.++||.+|.. ..+.++|+..|+++....
T Consensus 205 ~~~l~~al~~~P~~~~~~~~la~~l~~----~g~~~~A~~~l~~~l~~~ 249 (287)
T 3qou_A 205 IQQLQQQVAENPEDAALATQLALQLHQ----VGRNEEALELLFGHLRXD 249 (287)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHH----cccHHHHHHHHHHHHhcc
Confidence 7888888754 789999999999876 458999999999998753
No 172
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.87 E-value=0.0061 Score=59.45 Aligned_cols=93 Identities=15% Similarity=0.100 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHC--CC---------------HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA--GN---------------LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQF 141 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~---------------~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~ 141 (348)
+++|+..|++|.+. .+ ..+++++|.+|+ ...++++|+.+|++|.+. .++.|+|++|.+|.
T Consensus 284 ~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~ 362 (457)
T 1kt0_A 284 YMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL-KLREYTKAVECCDKALGLDSANEKGLYRRGEAQL 362 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 78999999999874 44 689999999998 678999999999999885 58999999999997
Q ss_pred ccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhc
Q 018965 142 NGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQD 181 (348)
Q Consensus 142 ~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~ 181 (348)
. .| ++++|+.+|++|.+. .+..+.+.|+.++..
T Consensus 363 ~-~g------~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 397 (457)
T 1kt0_A 363 L-MN------EFESAKGDFEKVLEVNPQNKAARLQISMCQKK 397 (457)
T ss_dssp H-TT------CHHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred H-cc------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4 23 789999999999886 578899999998864
No 173
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=96.85 E-value=0.011 Score=57.33 Aligned_cols=111 Identities=17% Similarity=0.193 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAG 156 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A 156 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. .++.+.+.+|.+|.. .| ++++|
T Consensus 292 ~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g------~~~~A 363 (537)
T 3fp2_A 292 SQEFFKFFQKAVDLNPEYPPTYYHRGQMYF-ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK-QG------KFTES 363 (537)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH-TT------CHHHH
T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC------CHHHH
Confidence 78999999998875 57999999999998 678999999999999876 467899999999964 23 78999
Q ss_pred HHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 157 VALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 157 ~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
..+|+++.+. .++.+.+.+|.+|.. ..+.++|+.+|++|.+..
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~~ 408 (537)
T 3fp2_A 364 EAFFNETKLKFPTLPEVPTFFAEILTD----RGDFDTAIKQYDIAKRLE 408 (537)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHH----hCCHHHHHHHHHHHHHcC
Confidence 9999999875 678899999999876 469999999999998754
No 174
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.83 E-value=0.013 Score=52.23 Aligned_cols=91 Identities=14% Similarity=0.123 Sum_probs=42.6
Q ss_pred HHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHh----
Q 018965 98 EACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SH----APALYSLAVIQFNGSGGGKNEKDLRAGVALCARAAS---- 165 (348)
Q Consensus 98 ~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~----~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~---- 165 (348)
.+.+.+|.+|. ..++.++|+.+|+++.+. ++ ..+.+.+|.+|.. .| ++++|..+|+++.+
T Consensus 184 ~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~-~g------~~~~A~~~~~~al~~~~~ 255 (338)
T 3ro2_A 184 RAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF-LG------EFETASEYYKKTLLLARQ 255 (338)
T ss_dssp HHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-HT------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-cC------CHHHHHHHHHHHHHHHHh
Confidence 35555555555 344555555555554432 22 1244555555432 11 44555555555432
Q ss_pred CCC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Q 018965 166 IGH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEAN 200 (348)
Q Consensus 166 ~G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa 200 (348)
.++ ..+.+.+|.+|.. ..+.++|..+|++|.
T Consensus 256 ~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~ 290 (338)
T 3ro2_A 256 LKDRAVEAQSCYSLGNTYTL----LQDYEKAIDYHLKHL 290 (338)
T ss_dssp TTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHH
T ss_pred hcchhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHH
Confidence 233 4555555555543 234555555555543
No 175
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.81 E-value=0.013 Score=46.15 Aligned_cols=94 Identities=15% Similarity=0.098 Sum_probs=73.9
Q ss_pred HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CCH----HHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--
Q 018965 97 LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SHA----PALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI-- 166 (348)
Q Consensus 97 ~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~~----~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~-- 166 (348)
..+.+.+|.+|. ...++++|+.+|++|.+. ++. .+.+.+|.+|.. .| ++++|..+|+++.+.
T Consensus 9 ~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g------~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 9 GRAFGNLGNTHY-LLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIF-LG------EFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH-cC------CHHHHHHHHHHHHHHHH
Confidence 346788888887 677999999999998865 332 488899999864 23 789999999998763
Q ss_pred --CC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 167 --GH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 167 --G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
++ ..+.+++|.+|.. ..++++|..+|++|.+.
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 81 QLKDRAVEAQSCYSLGNTYTL----LQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HhCCcHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHH
Confidence 43 5578889998875 56899999999998753
No 176
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.81 E-value=0.0045 Score=57.38 Aligned_cols=110 Identities=16% Similarity=0.205 Sum_probs=85.9
Q ss_pred cHHHHHHHHHHHHHCC--C----HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--------CCHHHHHHHHHHHHccCC
Q 018965 80 WSDSAHRFLKRCVFAG--N----LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--------SHAPALYSLAVIQFNGSG 145 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G--~----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--------G~~~A~~~Lg~~y~~G~g 145 (348)
..++|+.+|+++.+.. + ..+++.+|.+|. ...++++|+.+|++|.+. ..+.+.+.+|.+|.. .|
T Consensus 24 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~g 101 (406)
T 3sf4_A 24 DCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV-LG 101 (406)
T ss_dssp CHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TT
T ss_pred cHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-cC
Confidence 3789999999998864 4 367889999988 678999999999998654 235688899999864 33
Q ss_pred CCCCccCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHhccCCCCCC--------------------HHHHHHHHH
Q 018965 146 GGKNEKDLRAGVALCARAASI----GH----VDAVRELGHCLQDGYGVRQN--------------------IEKGRRLLI 197 (348)
Q Consensus 146 ~~~~~~d~~~A~~~~~kAA~~----G~----~~A~~~Lg~~y~~G~Gv~~d--------------------~~~A~~w~~ 197 (348)
++.+|+.+|++|.+. ++ ..+.+.||.+|.. ..+ +++|+.+|+
T Consensus 102 ------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~ 171 (406)
T 3sf4_A 102 ------NFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHA----KGKSFGCPGPQDVGEFPEEVRDALQAAVDFYE 171 (406)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HHHTCC-------CCCCHHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH----cCCcccccccchhhhhhhhHHHHHHHHHHHHH
Confidence 789999999998764 44 5588899998864 224 888888888
Q ss_pred HHHh
Q 018965 198 EANA 201 (348)
Q Consensus 198 ~Aa~ 201 (348)
+|.+
T Consensus 172 ~al~ 175 (406)
T 3sf4_A 172 ENLS 175 (406)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 177
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=96.75 E-value=0.00075 Score=45.57 Aligned_cols=47 Identities=28% Similarity=0.403 Sum_probs=36.3
Q ss_pred CCCCCCCCCChHHHHHHHHHhhcCCCCHHHHHHHHHHhHHHHhccCCchhhc
Q 018965 15 EKPDLFDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLS 66 (348)
Q Consensus 15 ~~~~~~~~l~~d~l~~il~~~a~~~~s~~d~~~~~l~~k~~~~~~~~~~~l~ 66 (348)
+++..+..||+|++..||..+ ++.|+..+..+||.|+.+..++..+.
T Consensus 4 ~~~~~~~~LP~eil~~I~~~L-----~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 4 FPGVSWDSLPDELLLGIFSCL-----CLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp -----CCSSCHHHHHHHHTTS-----CGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCCCHHHCCHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 356689999999999999987 45799999999999999988766554
No 178
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.74 E-value=0.0099 Score=52.92 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHC--CC----HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--------CCHHHHHHHHHHHHccCCC
Q 018965 81 SDSAHRFLKRCVFA--GN----LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--------SHAPALYSLAVIQFNGSGG 146 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~----~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--------G~~~A~~~Lg~~y~~G~g~ 146 (348)
.++|+.+|+++.+. ++ ..+.+.+|.+|. ...++++|+.+|+++.+. ..+.+.+.+|.+|.. .|
T Consensus 21 ~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g- 97 (338)
T 3ro2_A 21 CRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV-LG- 97 (338)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TT-
T ss_pred HHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHH-cc-
Confidence 78999999998875 34 367889999988 677999999999998654 235688899999864 33
Q ss_pred CCCccCHHHHHHHHHHHHhC----CC----HHHHHHHHHHHhc-cCC---------------CCCCHHHHHHHHHHHHh
Q 018965 147 GKNEKDLRAGVALCARAASI----GH----VDAVRELGHCLQD-GYG---------------VRQNIEKGRRLLIEANA 201 (348)
Q Consensus 147 ~~~~~d~~~A~~~~~kAA~~----G~----~~A~~~Lg~~y~~-G~G---------------v~~d~~~A~~w~~~Aa~ 201 (348)
++++|..+|+++.+. ++ ..+.+.+|.+|.. |.- ..+++++|..+|+++.+
T Consensus 98 -----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~ 171 (338)
T 3ro2_A 98 -----NFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLS 171 (338)
T ss_dssp -----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 789999999998663 44 4488899998864 210 00117888888888754
No 179
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.72 E-value=0.0059 Score=46.00 Aligned_cols=65 Identities=12% Similarity=0.116 Sum_probs=55.2
Q ss_pred CCCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 127 KSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 127 ~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
-.++.+.+.||.+|.. .| ++++|+.+|+++.+. .++.+.+.||.+|.. ..+.++|+.+|++|.+.
T Consensus 4 p~~~~~~~~lg~~~~~-~g------~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLK-HD------NASRALALFEELVETDPDYVGTYYHLGKLYER----LDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp -CCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHH-cC------CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhh
Confidence 4578999999999964 33 799999999999875 578999999999976 56899999999999853
No 180
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.69 E-value=0.0067 Score=43.66 Aligned_cols=60 Identities=22% Similarity=0.207 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQF 141 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~ 141 (348)
.++|+.+|+++.+. .++.+.+.+|.+|. ..++.++|+.+|+++.+. +++.+.++||.+|.
T Consensus 25 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 25 YDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 78999999999875 68999999999998 678999999999999876 68999999999885
No 181
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.64 E-value=0.028 Score=51.06 Aligned_cols=111 Identities=12% Similarity=0.055 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHCC--CHH-HHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 81 SDSAHRFLKRCVFAG--NLE-ACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G--~~~-A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
.++|...|+++.+.. +++ +.+.+|.++. ..++.++|+..|++|.+.. +......++.+.....| ++++
T Consensus 115 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~------~~~~ 187 (308)
T 2ond_A 115 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK------DKSV 187 (308)
T ss_dssp HHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH-HHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSC------CHHH
T ss_pred HHHHHHHHHHHHhccccCccHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC------CHHH
Confidence 677777888777643 454 6777777765 4456777888888887654 33343333433322223 7788
Q ss_pred HHHHHHHHHh--CCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 156 GVALCARAAS--IGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 156 A~~~~~kAA~--~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
|...|++|.+ -.++.+...++.++.. ..+.++|+.+|++|...
T Consensus 188 A~~~~~~al~~~p~~~~~~~~~~~~~~~----~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 188 AFKIFELGLKKYGDIPEYVLAYIDYLSH----LNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT----TCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhc
Confidence 8888888865 4678888888887754 34888899999999885
No 182
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=96.53 E-value=0.01 Score=51.41 Aligned_cols=99 Identities=10% Similarity=-0.022 Sum_probs=78.4
Q ss_pred CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--C---HHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CC
Q 018965 96 NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--H---APALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GH 168 (348)
Q Consensus 96 ~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~---~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~ 168 (348)
++++.|.+|..++ ..+++++|+..|+++.+.. + +.+++.+|.+|.. .| ++.+|+..|+++.+. .+
T Consensus 3 ~~~~~~~~a~~~~-~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~------~~~~A~~~~~~~l~~~P~~ 74 (225)
T 2yhc_A 3 PPNEIYATAQQKL-QDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NA------DLPLAQAAIDRFIRLNPTH 74 (225)
T ss_dssp CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cC------CHHHHHHHHHHHHHHCcCC
Confidence 5678899999988 6789999999999998742 2 4799999999974 23 799999999999874 33
Q ss_pred H---HHHHHHHHHHhcc----------CC----CCCCHHHHHHHHHHHHhc
Q 018965 169 V---DAVRELGHCLQDG----------YG----VRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 169 ~---~A~~~Lg~~y~~G----------~G----v~~d~~~A~~w~~~Aa~~ 202 (348)
+ .|.+.+|.+|..- .+ -..+.++|+..|+++.+.
T Consensus 75 ~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~ 125 (225)
T 2yhc_A 75 PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG 125 (225)
T ss_dssp TTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH
Confidence 3 4899999988641 11 134789999999999875
No 183
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.45 E-value=0.029 Score=50.97 Aligned_cols=111 Identities=7% Similarity=0.026 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHC---CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHH-HHHHHHHHHHccCCCCCCccCHH
Q 018965 81 SDSAHRFLKRCVFA---GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAP-ALYSLAVIQFNGSGGGKNEKDLR 154 (348)
Q Consensus 81 ~~~A~~~~~kaA~~---G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~-A~~~Lg~~y~~G~g~~~~~~d~~ 154 (348)
.++|...|++|.+. +++.+.+.+|.++. ..++.++|...|++|.+.. ++. +...+|.++.. . .+++
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~------~~~~ 151 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-A------EGIK 151 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-H------HCHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHH-h------cCHH
Confidence 47999999999983 67889999999987 5668999999999999865 455 88999988854 2 3689
Q ss_pred HHHHHHHHHHhCCC--HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 155 AGVALCARAASIGH--VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 155 ~A~~~~~kAA~~G~--~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+|...|++|.+... ......++.+... ...+.++|+..|++|.+.
T Consensus 152 ~A~~~~~~a~~~~p~~~~~~~~~a~~~~~---~~~~~~~A~~~~~~al~~ 198 (308)
T 2ond_A 152 SGRMIFKKAREDARTRHHVYVTAALMEYY---CSKDKSVAFKIFELGLKK 198 (308)
T ss_dssp HHHHHHHHHHTSTTCCTHHHHHHHHHHHH---TSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHh
Confidence 99999999998643 3443333433221 135899999999999764
No 184
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=96.34 E-value=0.021 Score=46.90 Aligned_cols=79 Identities=14% Similarity=0.171 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhh-hhhccCCH--HHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMI-RFYCLQNR--SSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~-y~~~~~d~--~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
.++|..+|+++.+. .++.+.+.+|.+ |. ..++. ++|+.+|+++.+. .++.+.+.||.+|.. .| ++
T Consensus 60 ~~~A~~~~~~al~~~p~~~~~~~~la~~l~~-~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g------~~ 131 (177)
T 2e2e_A 60 YSNSLLAYRQALQLRGENAELYAALATVLYY-QASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM-QA------NY 131 (177)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHH-HTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cc------cH
Confidence 78999999998774 589999999999 65 44565 9999999999875 478999999999974 23 78
Q ss_pred HHHHHHHHHHHhCC
Q 018965 154 RAGVALCARAASIG 167 (348)
Q Consensus 154 ~~A~~~~~kAA~~G 167 (348)
++|..+|+++.+..
T Consensus 132 ~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 132 AQAIELWQKVMDLN 145 (177)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998763
No 185
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.06 E-value=0.029 Score=46.61 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCC----CHHHHHHHHHHHhccCCCC
Q 018965 113 NRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIG----HVDAVRELGHCLQDGYGVR 186 (348)
Q Consensus 113 d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G----~~~A~~~Lg~~y~~G~Gv~ 186 (348)
+...+.+-|.++.+.| +.+++|++|..+... . .+.|..+++..|+...+.. +.++.|+||..|.. .
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S-~---~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k----l 84 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRS-K---YNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR----L 84 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC-S---SHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH----T
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcC-C---CHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH----c
Confidence 4456667777776654 578888888888763 3 4678888888888888876 36788888887755 5
Q ss_pred CCHHHHHHHHHHHHhcC--CHHHHH
Q 018965 187 QNIEKGRRLLIEANARE--FFQSVS 209 (348)
Q Consensus 187 ~d~~~A~~w~~~Aa~~G--~~~A~~ 209 (348)
+|+.+|+++++++-+.. |.+|+.
T Consensus 85 ~~Y~~A~~y~~~lL~ieP~n~QA~~ 109 (152)
T 1pc2_A 85 KEYEKALKYVRGLLQTEPQNNQAKE 109 (152)
T ss_dssp SCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 68899999998886654 455554
No 186
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.02 E-value=0.026 Score=47.31 Aligned_cols=78 Identities=15% Similarity=0.027 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHCCC---------H-----HHHHHhhhhhhhccCCHHHHHHHHHHHHhC---------CCHHHH----
Q 018965 81 SDSAHRFLKRCVFAGN---------L-----EACYTLGMIRFYCLQNRSSGTSLMAKAAMK---------SHAPAL---- 133 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~---------~-----~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~---------G~~~A~---- 133 (348)
+++|+..|++|.+... . .+++++|.++. .-+++++|+..|.+|.+. .++.|+
T Consensus 27 ~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~-~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~ 105 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA-GLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAV 105 (159)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHH
Confidence 7899999999887642 2 28999999987 457899999999999976 678888
Q ss_pred HHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC
Q 018965 134 YSLAVIQFNGSGGGKNEKDLRAGVALCARAASI 166 (348)
Q Consensus 134 ~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~ 166 (348)
|++|..+. +.| ++++|+..|++|.+.
T Consensus 106 ~~rG~aL~-~lg------r~eEAl~~y~kAlel 131 (159)
T 2hr2_A 106 YSRALALD-GLG------RGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHHHHHHH-HTT------CHHHHHHHHHHHHHH
T ss_pred HhHHHHHH-HCC------CHHHHHHHHHHHHhc
Confidence 99999985 344 789999999998653
No 187
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.98 E-value=0.099 Score=48.20 Aligned_cols=110 Identities=12% Similarity=0.042 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHH----CCCH----HHHHHhhhhhhhccCCHHHHHHHHHHHHhCC----------CHHHHHHHHHHHHc
Q 018965 81 SDSAHRFLKRCVF----AGNL----EACYTLGMIRFYCLQNRSSGTSLMAKAAMKS----------HAPALYSLAVIQFN 142 (348)
Q Consensus 81 ~~~A~~~~~kaA~----~G~~----~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G----------~~~A~~~Lg~~y~~ 142 (348)
.++|..+++++.+ .|++ .+.+.+|.+|. ..+++.+|+.+|+++.+.. ...+..+||.+|..
T Consensus 69 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 147 (373)
T 1hz4_A 69 LTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF-AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA 147 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH
Confidence 7788888888765 4555 34678888887 6789999999999987632 24567789988854
Q ss_pred cCCCCCCccCHHHHHHHHHHHHhC----C---CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 143 GSGGGKNEKDLRAGVALCARAASI----G---HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 143 G~g~~~~~~d~~~A~~~~~kAA~~----G---~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
.| ++++|..+|+++.+. | ...+.+.||.++.. ..|.++|..+++++...
T Consensus 148 -~g------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~l~~a~~~ 203 (373)
T 1hz4_A 148 -WA------RLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLA----RGDLDNARSQLNRLENL 203 (373)
T ss_dssp -TT------CHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred -hc------CHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 34 789999999998763 2 24678889988765 45899999999998753
No 188
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.93 E-value=0.057 Score=49.86 Aligned_cols=110 Identities=19% Similarity=0.153 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHC---CCHH----HHHHhhhhhhhccCCHHHHHHHHHHHHh----CCCH----HHHHHHHHHHHccCC
Q 018965 81 SDSAHRFLKRCVFA---GNLE----ACYTLGMIRFYCLQNRSSGTSLMAKAAM----KSHA----PALYSLAVIQFNGSG 145 (348)
Q Consensus 81 ~~~A~~~~~kaA~~---G~~~----A~~~Lg~~y~~~~~d~~~A~~~~~~AA~----~G~~----~A~~~Lg~~y~~G~g 145 (348)
.++|..+++++.+. +++. +.+.+|.+|. ...++++|..+|++|.+ .|++ .+.+++|.+|.. .|
T Consensus 30 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~-~G 107 (373)
T 1hz4_A 30 PDEAERLAKLALEELPPGWFYSRIVATSVLGEVLH-CKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA-QG 107 (373)
T ss_dssp HHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-CC
Confidence 67888999888764 3332 6778888877 57799999999999875 3554 346788988864 34
Q ss_pred CCCCccCHHHHHHHHHHHHhC----C------CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 146 GGKNEKDLRAGVALCARAASI----G------HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 146 ~~~~~~d~~~A~~~~~kAA~~----G------~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
++.+|..+|+++.+. | ...+..+||.+|.. ..++++|..++++|.+.
T Consensus 108 ------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 108 ------FLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA----WARLDEAEASARSGIEV 164 (373)
T ss_dssp ------CHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHH
Confidence 789999999998752 2 24567789988764 35899999999998764
No 189
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=95.66 E-value=0.072 Score=44.19 Aligned_cols=88 Identities=9% Similarity=0.007 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHH--CCCHHHHHHhhhhhh--hccCCHHHHHHHHHHHHhCC----CHHHHHHHHHHHHccCCCCCCccCH
Q 018965 82 DSAHRFLKRCVF--AGNLEACYTLGMIRF--YCLQNRSSGTSLMAKAAMKS----HAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 82 ~~A~~~~~kaA~--~G~~~A~~~Lg~~y~--~~~~d~~~A~~~~~~AA~~G----~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
..+.+-|.+..+ ..+++++|++|..+. ..+.|..+|+.+|+...+.. +.++.|+||+-|.. -.|+
T Consensus 15 ~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-------l~~Y 87 (152)
T 1pc2_A 15 LKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-------LKEY 87 (152)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-------TSCH
T ss_pred HHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-------ccCH
Confidence 455666676666 446899999999988 34457889999999999987 36799999999953 3489
Q ss_pred HHHHHHHHHHHhC--CCHHHHHHHH
Q 018965 154 RAGVALCARAASI--GHVDAVRELG 176 (348)
Q Consensus 154 ~~A~~~~~kAA~~--G~~~A~~~Lg 176 (348)
.+|.++++++-+. +|.+|+.-.-
T Consensus 88 ~~A~~y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 88 EKALKYVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 9999999998764 6777776544
No 190
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=95.53 E-value=0.074 Score=47.96 Aligned_cols=110 Identities=8% Similarity=-0.044 Sum_probs=79.8
Q ss_pred cHHHHHHHHHHHHHCC-C-HHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFAG-N-LEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~G-~-~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
-.++|..+|+++.+.. + ......++..+. ...+...|+..|+++.+. +++.+.++||.+|... | ++++
T Consensus 166 ~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~-~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~-g------~~~~ 237 (287)
T 3qou_A 166 RSEDAEAVLXTIPLQDQDTRYQGLVAQIELL-XQAADTPEIQQLQQQVAENPEDAALATQLALQLHQV-G------RNEE 237 (287)
T ss_dssp CHHHHHHHHTTSCGGGCSHHHHHHHHHHHHH-HHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-T------CHHH
T ss_pred CHHHHHHHHHhCchhhcchHHHHHHHHHHHH-hhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHc-c------cHHH
Confidence 3789999999876542 2 333333343333 233455688899998865 5899999999999742 3 6899
Q ss_pred HHHHHHHHHhC--CC--HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 156 GVALCARAASI--GH--VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 156 A~~~~~kAA~~--G~--~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
|+..|+++... ++ ..+..+|+.+|.. ..+..+|..+|+++..
T Consensus 238 A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~----~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 238 ALELLFGHLRXDLTAADGQTRXTFQEILAA----LGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHHHHCTTGGGGHHHHHHHHHHHH----HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccchHHHHHHHHHHH----cCCCCcHHHHHHHHHH
Confidence 99999999875 45 8899999999875 2245678888888753
No 191
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=95.52 E-value=0.055 Score=40.13 Aligned_cols=65 Identities=6% Similarity=-0.074 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 129 HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 129 ~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
++.+.+.+|..|.. ..++.+|+.+|++|.+. .++.+.+++|.+|.. ..++++|+.+|++|.+...
T Consensus 3 ~~~~~~~~g~~~~~-------~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p 69 (111)
T 2l6j_A 3 QFEKQKEQGNSLFK-------QGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK----LGEYTQAIQMCQQGLRYTS 69 (111)
T ss_dssp HHHHHHHHHHHHHT-------TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTSCS
T ss_pred hHHHHHHHHHHHHH-------cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhCC
Confidence 45788999999863 23899999999999874 689999999999876 4589999999999987643
No 192
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=95.49 E-value=0.063 Score=40.82 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC---------CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHH
Q 018965 129 HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI---------GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEA 199 (348)
Q Consensus 129 ~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~---------G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~A 199 (348)
++.-+|.||..++. ..|+.+|+.||++|.+. ..++....||.+|.. ..|+++|+.++++|
T Consensus 4 sa~dc~~lG~~~~~-------~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~----~g~~~~A~~~~~~a 72 (104)
T 2v5f_A 4 TAEDCFELGKVAYT-------EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ----QGDLDKALLLTKKL 72 (104)
T ss_dssp CHHHHHHHHHHHHH-------TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH----TTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-------ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH----ccCHHHHHHHHHHH
Confidence 46678999999874 34899999999999873 347788999998875 44899999999999
Q ss_pred HhcC--CHHHHHh
Q 018965 200 NARE--FFQSVSK 210 (348)
Q Consensus 200 a~~G--~~~A~~~ 210 (348)
.... +..+..+
T Consensus 73 l~l~P~~~~~~~n 85 (104)
T 2v5f_A 73 LELDPEHQRANGN 85 (104)
T ss_dssp HHHCTTCHHHHHH
T ss_pred HhcCCCCHHHHhh
Confidence 7543 4455443
No 193
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.00 E-value=0.37 Score=53.34 Aligned_cols=100 Identities=15% Similarity=0.156 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHH
Q 018965 82 DSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCA 161 (348)
Q Consensus 82 ~~A~~~~~kaA~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~ 161 (348)
++|.+++.+. .++...+.+|..+. ...+.++|+..|.+| +++.+.+++|..+.. .| +++.|+++|.
T Consensus 1093 drAiE~Aerv---n~p~vWsqLAKAql-~~G~~kEAIdsYiKA---dD~say~eVa~~~~~-lG------kyEEAIeyL~ 1158 (1630)
T 1xi4_A 1093 DRAYEFAERC---NEPAVWSQLAKAQL-QKGMVKEAIDSYIKA---DDPSSYMEVVQAANT-SG------NWEELVKYLQ 1158 (1630)
T ss_pred HHHHHHHHhc---CCHHHHHHHHHHHH-hCCCHHHHHHHHHhc---CChHHHHHHHHHHHH-cC------CHHHHHHHHH
Confidence 4444444433 56777888888877 566788888888887 788888888888754 22 6677777776
Q ss_pred HHHhCC-----------------------------CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHH
Q 018965 162 RAASIG-----------------------------HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEA 199 (348)
Q Consensus 162 kAA~~G-----------------------------~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~A 199 (348)
+|-+.. +....+.+|..+.. ..++++|..+|.+|
T Consensus 1159 mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~----eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1159 MARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYD----EKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHh----cCCHHHHHHHHHhh
Confidence 644322 22334445554443 45777888888776
No 194
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.98 E-value=0.12 Score=38.86 Aligned_cols=64 Identities=11% Similarity=-0.039 Sum_probs=32.4
Q ss_pred CHHHHHHhhhhhh--hccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC
Q 018965 96 NLEACYTLGMIRF--YCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI 166 (348)
Q Consensus 96 ~~~A~~~Lg~~y~--~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~ 166 (348)
|++..+.+|..++ +......+|..+|++|... .++.|.+.||.+++. .| |+.+|+.+|++..++
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g------~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SF------RFQEAIDTWVLLLDS 72 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cC------CHHHHHHHHHHHHhh
Confidence 4555555555543 2223345555555555443 355555555555543 12 455555555555544
No 195
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=94.92 E-value=0.17 Score=46.29 Aligned_cols=78 Identities=15% Similarity=0.039 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHCCCH----HHHHHhhhhhhhccCCHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHccCCCCCCcc
Q 018965 81 SDSAHRFLKRCVFAGNL----EACYTLGMIRFYCLQNRSSGTSLMAKAAMKS-----HAPALYSLAVIQFNGSGGGKNEK 151 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~----~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G-----~~~A~~~Lg~~y~~G~g~~~~~~ 151 (348)
.++|+..|+++....++ .+.|.||.++. .-++..+|+.||+++.... .+++++++|.++.. .|
T Consensus 151 ~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~-~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~-lG------ 222 (282)
T 4f3v_A 151 WTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA-NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS-QG------ 222 (282)
T ss_dssp HHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH-HT------
T ss_pred HHHHHHHHHHhhccCCcccHHHHHHHHHHHHH-HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH-cC------
Confidence 57889999877766544 48999999988 5679999999999998665 34699999999864 34
Q ss_pred CHHHHHHHHHHHHhC
Q 018965 152 DLRAGVALCARAASI 166 (348)
Q Consensus 152 d~~~A~~~~~kAA~~ 166 (348)
+.++|...|+++...
T Consensus 223 r~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 223 NESAAVALLEWLQTT 237 (282)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc
Confidence 679999999998765
No 196
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=94.89 E-value=0.11 Score=38.01 Aligned_cols=64 Identities=8% Similarity=-0.042 Sum_probs=44.6
Q ss_pred HHhhhhhhhccCCHHHHHHHHHHHHhC--CCHH-HHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHH
Q 018965 101 YTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAP-ALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAV 172 (348)
Q Consensus 101 ~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~-A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~ 172 (348)
+.+|..++ ..++.++|+.+|+++.+. .++. +.+.+|.+|.. .| ++++|+.+|+++.+. .++.+.
T Consensus 4 ~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~------~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELI-NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LG------DWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHH-HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HT------CHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cC------CHHHHHHHHHHHHhcCCCcHHHH
Confidence 45566665 566788888888888765 3667 88888888863 22 678888888888764 344444
No 197
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=94.84 E-value=0.33 Score=47.38 Aligned_cols=112 Identities=12% Similarity=0.051 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHCCC--H-HHHHHhhhhhhhccCCHHHHHHHHHHHHhCCC--HHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 81 SDSAHRFLKRCVFAGN--L-EACYTLGMIRFYCLQNRSSGTSLMAKAAMKSH--APALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~--~-~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~--~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
.++|...|+++.+... + .+...+|.++. ..++.++|...|++|.+... .......+.+...-.| |+++
T Consensus 337 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~------~~~~ 409 (530)
T 2ooe_A 337 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK------DKSV 409 (530)
T ss_dssp HHHHHHHHHHHHHSSSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTC------CHHH
T ss_pred HHHHHHHHHHHhCccccCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcC------ChhH
Confidence 5566666666665432 2 34444444443 23345666666666665432 2223333333211122 5677
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
|...|++|.+. .++.....++.++.. ..|.++|+.+|++|...+
T Consensus 410 A~~~~e~al~~~p~~~~~~~~~~~~~~~----~g~~~~Ar~~~~~al~~~ 455 (530)
T 2ooe_A 410 AFKIFELGLKKYGDIPEYVLAYIDYLSH----LNEDNNTRVLFERVLTSG 455 (530)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTT----TTCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHh----CCCHhhHHHHHHHHHhcc
Confidence 77777777653 456777777776654 237777888888877654
No 198
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.68 E-value=0.046 Score=37.28 Aligned_cols=43 Identities=35% Similarity=0.790 Sum_probs=30.7
Q ss_pred CCCccccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCCCCC
Q 018965 266 LGNGLRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECVPPL 321 (348)
Q Consensus 266 ~~~~~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~~~~ 321 (348)
+......|.. |+.... .+|.+|. ++|||..|. +. ||..|...+
T Consensus 8 ~~~~~~~C~v--C~~~~k-----Y~CPrC~-~~yCSl~C~----k~-Hk~~C~~~~ 50 (56)
T 2yqq_A 8 LKCSTVVCVI--CLEKPK-----YRCPACR-VPYCSVVCF----RK-HKEQCNPET 50 (56)
T ss_dssp CCCCCCCCTT--TCSCCS-----EECTTTC-CEESSHHHH----HH-HHHHCCCCC
T ss_pred cCCCCCccCc--CcCCCe-----eeCCCCC-CCeeCHHHH----HH-HHhhCcCCc
Confidence 3344456875 776333 7899998 899999996 44 676787655
No 199
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.64 E-value=0.17 Score=37.86 Aligned_cols=71 Identities=8% Similarity=-0.146 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHh--CCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 127 KSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAAS--IGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 127 ~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~--~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
-.+++..+.+|..+....+ .....+|..+|++|.. -.++.|.+.||..+.. ..|+.+|+.+|++..++..
T Consensus 3 p~~~~~~~~~a~al~~~~~----~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~----~g~y~~Ai~~w~~~l~~~p 74 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHK----QAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI----SFRFQEAIDTWVLLLDSND 74 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTT----TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHHhcC----CCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCC
Confidence 3578888999988754332 2356899999999976 4799999999998887 6799999999999988766
Q ss_pred H
Q 018965 205 F 205 (348)
Q Consensus 205 ~ 205 (348)
.
T Consensus 75 ~ 75 (93)
T 3bee_A 75 P 75 (93)
T ss_dssp T
T ss_pred C
Confidence 5
No 200
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=94.28 E-value=0.23 Score=45.66 Aligned_cols=102 Identities=10% Similarity=-0.048 Sum_probs=77.0
Q ss_pred CHHHHHHhhhhhh---hcc-------CCHHHHHHHHHHHHhCC----CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHH
Q 018965 96 NLEACYTLGMIRF---YCL-------QNRSSGTSLMAKAAMKS----HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCA 161 (348)
Q Consensus 96 ~~~A~~~Lg~~y~---~~~-------~d~~~A~~~~~~AA~~G----~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~ 161 (348)
++++.|.+|.... +.. ....+|...+++|.+.. +..|+..||.+|..=.+. .--|.++|.+.|+
T Consensus 151 dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~--~gGd~ekA~~~fe 228 (301)
T 3u64_A 151 DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPES--FGGGMEKAHTAFE 228 (301)
T ss_dssp GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTT--TTCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCc--cCCCHHHHHHHHH
Confidence 4788888888764 221 24678999999999885 345999999999762100 0128999999999
Q ss_pred HHHhC---CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 162 RAASI---GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 162 kAA~~---G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+|.+. |+.+..+.+|..|..- ..|.+++..++++|...
T Consensus 229 rAL~LnP~~~id~~v~YA~~l~~~---~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 229 HLTRYCSAHDPDHHITYADALCIP---LNNRAGFDEALDRALAI 269 (301)
T ss_dssp HHHHHCCTTCSHHHHHHHHHTTTT---TTCHHHHHHHHHHHHHC
T ss_pred HHHHhCCCCCchHHHHHHHHHHHh---cCCHHHHHHHHHHHHcC
Confidence 99874 4599999999988642 25899999999999753
No 201
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=93.06 E-value=0.48 Score=46.22 Aligned_cols=110 Identities=6% Similarity=0.010 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHH---CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCC--H-HHHHHHHHHHHccCCCCCCccCHHH
Q 018965 82 DSAHRFLKRCVF---AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSH--A-PALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 82 ~~A~~~~~kaA~---~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~--~-~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
++|...|++|.+ -.++...+.+|.++. ..++.++|...|+++.+... + .+...+|.++.. . .+.++
T Consensus 303 ~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~------~~~~~ 374 (530)
T 2ooe_A 303 DEAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-A------EGIKS 374 (530)
T ss_dssp HHHHHHHHHHTTTTCSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHH-H------HHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHH-h------cCHHH
Confidence 389999999986 357889999998887 45789999999999998754 3 477788877753 2 26789
Q ss_pred HHHHHHHHHhCCC--HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 156 GVALCARAASIGH--VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 156 A~~~~~kAA~~G~--~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
|...|.+|.+... .......+.+... ...|.++|+..|++|.+.
T Consensus 375 A~~~~~~Al~~~~~~~~~~~~~a~~~~~---~~~~~~~A~~~~e~al~~ 420 (530)
T 2ooe_A 375 GRMIFKKAREDARTRHHVYVTAALMEYY---CSKDKSVAFKIFELGLKK 420 (530)
T ss_dssp HHHHHHHHHTCTTCCTHHHHHHHHHHHH---HTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCchHHHHHHHHHHHH---HcCChhHHHHHHHHHHHH
Confidence 9999999998653 3333333433211 135889999999999765
No 202
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=92.48 E-value=0.32 Score=35.36 Aligned_cols=59 Identities=12% Similarity=0.021 Sum_probs=48.0
Q ss_pred HHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHH-HHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 134 YSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVD-AVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 134 ~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~-A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
+.+|..|.. ..++.+|+.+|+++.+. .++. +.+.+|.+|.. ..+.++|+.+|++|.+..
T Consensus 4 ~~~a~~~~~-------~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 4 LKTIKELIN-------QGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK----LGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHHHH-------HTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH-------cCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 566777653 33789999999999875 5788 99999999875 458999999999998754
No 203
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=92.40 E-value=0.37 Score=44.60 Aligned_cols=110 Identities=6% Similarity=-0.018 Sum_probs=81.2
Q ss_pred HHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC----CCHHHHHHHHHHHHccCCCCCCccCHHHHH
Q 018965 84 AHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK----SHAPALYSLAVIQFNGSGGGKNEKDLRAGV 157 (348)
Q Consensus 84 A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~----G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~ 157 (348)
++..|++..+. .+..+.+.+|.+|. ..+|.++|+.|+.+..+. ++.++...++.+|+. .| ++++|.
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~-~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~-~~------r~d~A~ 156 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQA-ILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALL-NN------NVSTAS 156 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHH-TT------CHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHH-HcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHH-CC------CHHHHH
Confidence 66777776664 56777889999988 678999999999999776 478888888888875 23 578899
Q ss_pred HHHHHHHhCCC------HHHHHHHHHHH---hccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 158 ALCARAASIGH------VDAVRELGHCL---QDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 158 ~~~~kAA~~G~------~~A~~~Lg~~y---~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
+.+++..+... -....+|+..+ ..|. .+...|+..|+..++...
T Consensus 157 k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~---~~~q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 157 TIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNK---ETATSNFYYYEELSQTFP 209 (310)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTC---STTTHHHHHHHHHHTTSC
T ss_pred HHHHHHHhcCccccccchHHHHHHHHHHHHHHhCC---ccHHHHHHHHHHHHHhCC
Confidence 99988765543 45566666442 2232 257889999999877754
No 204
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.18 E-value=0.8 Score=50.75 Aligned_cols=100 Identities=15% Similarity=0.131 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALC 160 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~ 160 (348)
.++|+..|+|+- -+.+|+-.| +. .-++.++|.+++++. ..+...++||..++.. | .+++|+..|
T Consensus 1065 yEEAf~IYkKa~--~~~~A~~VL---ie-~i~nldrAiE~Aerv---n~p~vWsqLAKAql~~-G------~~kEAIdsY 1128 (1630)
T 1xi4_A 1065 FEEAFAIFRKFD--VNTSAVQVL---IE-HIGNLDRAYEFAERC---NEPAVWSQLAKAQLQK-G------MVKEAIDSY 1128 (1630)
T ss_pred HHHHHHHHHHcC--CHHHHHHHH---HH-HHhhHHHHHHHHHhc---CCHHHHHHHHHHHHhC-C------CHHHHHHHH
Confidence 899999999973 233332211 22 346789999999877 6799999999999764 3 689999999
Q ss_pred HHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC
Q 018965 161 ARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 161 ~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G 203 (348)
.+| +++.+.++++..+.. ..++++|.+||.+|-...
T Consensus 1129 iKA---dD~say~eVa~~~~~----lGkyEEAIeyL~mArk~~ 1164 (1630)
T 1xi4_A 1129 IKA---DDPSSYMEVVQAANT----SGNWEELVKYLQMARKKA 1164 (1630)
T ss_pred Hhc---CChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhc
Confidence 997 999999999999886 559999999999987655
No 205
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=91.98 E-value=0.039 Score=50.83 Aligned_cols=46 Identities=26% Similarity=0.255 Sum_probs=40.4
Q ss_pred CCCCCCCChHHHHHHHHHhhcCCCCHHHHHHHHHHhHHHHhccCCchhhcc
Q 018965 17 PDLFDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLSQ 67 (348)
Q Consensus 17 ~~~~~~l~~d~l~~il~~~a~~~~s~~d~~~~~l~~k~~~~~~~~~~~l~~ 67 (348)
++.||.||+|++..||+.+ +|.|+..+..+|+.|+.++.++..+..
T Consensus 2 ~~~l~~LP~ei~l~IlsfL-----~p~DL~~l~~vcr~Wr~la~D~~LWr~ 47 (312)
T 3l2o_B 2 ASTLTRLPIDVQLYILSFL-----SPHDLCQLGSTNHYWNETVRDPILWRY 47 (312)
T ss_dssp CCHHHHSCHHHHHHHHHTS-----CHHHHHHHHTTCHHHHHHHTCHHHHHH
T ss_pred cchhHhCCHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 5678999999999999976 778999999999999999998876643
No 206
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=91.49 E-value=2.2 Score=39.31 Aligned_cols=118 Identities=8% Similarity=-0.030 Sum_probs=83.9
Q ss_pred CcHHHHHHHHHHHHHC----CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCC------HHHHHHHHHH--HH-ccCC
Q 018965 79 NWSDSAHRFLKRCVFA----GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSH------APALYSLAVI--QF-NGSG 145 (348)
Q Consensus 79 ~~~~~A~~~~~kaA~~----G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~------~~A~~~Lg~~--y~-~G~g 145 (348)
...++|++|+.+..+. ++.+++..+..+|+ ...+.++|.+.+++..+... -....+|+.. .+ .|.+
T Consensus 114 g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L-~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~ 192 (310)
T 3mv2_B 114 GDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL-LNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKE 192 (310)
T ss_dssp TCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCc
Confidence 3489999999999776 57899999999998 56779999999988766643 3455666644 32 2322
Q ss_pred CCCCccCHHHHHHHHHHHHhCCC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHH------------hcCCHHHHH
Q 018965 146 GGKNEKDLRAGVALCARAASIGH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEAN------------AREFFQSVS 209 (348)
Q Consensus 146 ~~~~~~d~~~A~~~~~kAA~~G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa------------~~G~~~A~~ 209 (348)
+++.|+..|+..++... +...++ ++.. ..++++|...+++.- +..++.+..
T Consensus 193 ------~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~----~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~La 259 (310)
T 3mv2_B 193 ------TATSNFYYYEELSQTFPTWKTQLGLLN---LHLQ----QRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLA 259 (310)
T ss_dssp ------TTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHH----HTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHH
T ss_pred ------cHHHHHHHHHHHHHhCCCcccHHHHHH---HHHH----cCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHH
Confidence 57899999999988753 334444 3322 248899998887543 356777775
Q ss_pred h
Q 018965 210 K 210 (348)
Q Consensus 210 ~ 210 (348)
+
T Consensus 260 N 260 (310)
T 3mv2_B 260 N 260 (310)
T ss_dssp H
T ss_pred H
Confidence 4
No 207
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=90.93 E-value=5.4 Score=37.69 Aligned_cols=114 Identities=9% Similarity=-0.051 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhh----hccCC--HHHHHHHHHHHH-----hCCCHHHHHHHHHHHHccCCCC
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRF----YCLQN--RSSGTSLMAKAA-----MKSHAPALYSLAVIQFNGSGGG 147 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~----~~~~d--~~~A~~~~~~AA-----~~G~~~A~~~Lg~~y~~G~g~~ 147 (348)
..+|+.+|++|.+. +++.|+-.++..|. ..+.+ ...++.--.+++ ...++.+...++.++.. .|
T Consensus 215 ~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~-~g-- 291 (372)
T 3ly7_A 215 LNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALV-KG-- 291 (372)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHH-HT--
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHh-CC--
Confidence 58999999999875 68888888888775 11112 222222112222 13467777777777642 24
Q ss_pred CCccCHHHHHHHHHHHHhCC-CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCH
Q 018965 148 KNEKDLRAGVALCARAASIG-HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFF 205 (348)
Q Consensus 148 ~~~~d~~~A~~~~~kAA~~G-~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~ 205 (348)
|+++|+.++++|.... +..+...+|.++.. .-+.++|..+|.+|....-.
T Consensus 292 ----d~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~----~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 292 ----KTDESYQAINTGIDLEMSWLNYVLLGKVYEM----KGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp ----CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHSCS
T ss_pred ----CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcCCC
Confidence 8999999999998875 34455677887763 45899999999999876543
No 208
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=90.77 E-value=2.2 Score=41.22 Aligned_cols=80 Identities=14% Similarity=0.116 Sum_probs=62.7
Q ss_pred cCCHHHHHHHHHHHHhC-----C--CH---HHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHh-----CC--C---HH
Q 018965 111 LQNRSSGTSLMAKAAMK-----S--HA---PALYSLAVIQFNGSGGGKNEKDLRAGVALCARAAS-----IG--H---VD 170 (348)
Q Consensus 111 ~~d~~~A~~~~~~AA~~-----G--~~---~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~-----~G--~---~~ 170 (348)
.+++++|..+|+++-+. | |+ ..+.+||..|.. .| ++++|..+|+++.+ .| + ..
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g------~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~ 383 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQ------DWEGALKYGQKIIKPYSKHYPVYSLNVAS 383 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHHHHHSCSSCHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hc------CHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 34789999999999763 2 43 578899999964 34 78999999999876 34 4 34
Q ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 171 AVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 171 A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
++++||.+|.. ..++++|..+|++|.+
T Consensus 384 ~l~nLa~~~~~----qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 384 MWLKLGRLYMG----LENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh----ccCHHHHHHHHHHHHH
Confidence 78899999976 3489999999999964
No 209
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=89.79 E-value=2.6 Score=33.58 Aligned_cols=89 Identities=15% Similarity=0.048 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCCCH----HHHHHHHHHHhccCCCC
Q 018965 113 NRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIGHV----DAVRELGHCLQDGYGVR 186 (348)
Q Consensus 113 d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G~~----~A~~~Lg~~y~~G~Gv~ 186 (348)
+......-|.++...| ..+++|++|..+... . .+.|..+++.+++.-...+++ +..|.||..+.. -
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S-~---~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk----l 87 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRT-R---YNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR----L 87 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTS-S---SHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH----T
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcC-C---CHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH----h
Confidence 3445566676666644 477888888888663 3 577788888888888777643 577888876654 4
Q ss_pred CCHHHHHHHHHHHHhcC--CHHHHH
Q 018965 187 QNIEKGRRLLIEANARE--FFQSVS 209 (348)
Q Consensus 187 ~d~~~A~~w~~~Aa~~G--~~~A~~ 209 (348)
.|+.+|+++....-+.. |.+|+.
T Consensus 88 g~Y~~A~~~~~~lL~~eP~n~QA~~ 112 (126)
T 1nzn_A 88 KEYEKALKYVRGLLQTEPQNNQAKE 112 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 58888888887765443 345443
No 210
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=88.59 E-value=0.17 Score=46.61 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=36.5
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCCHHHHH-HHHHHhHHHHhccCCchhh
Q 018965 18 DLFDALPDDLLECVLSKLISSAPSPSDFI-NVLLTCKRLNRVGLRPTVL 65 (348)
Q Consensus 18 ~~~~~l~~d~l~~il~~~a~~~~s~~d~~-~~~l~~k~~~~~~~~~~~l 65 (348)
..++.||+|++.+||.+|. +.++. ...++||.|+.+..++..+
T Consensus 49 ~~~~~LP~ell~~Il~~Lp-----~~~L~~r~~~VCk~Wr~l~~~~~~w 92 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELP-----ATELVQACRLVCLRWKELVDGAPLW 92 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSC-----HHHHHHTGGGTCHHHHHHHTSHHHH
T ss_pred cChhhCCHHHHHHHHHcCC-----HHHHHHHHHHHhHHHHHHhcChHHH
Confidence 4788899999999999884 46898 9999999999998765543
No 211
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.69 E-value=6.4 Score=36.31 Aligned_cols=110 Identities=13% Similarity=0.081 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHC----CCH----HHHHHhhhhhhhccCCHHHHHHHHHHHHhC--------CCHHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFA----GNL----EACYTLGMIRFYCLQNRSSGTSLMAKAAMK--------SHAPALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G~~----~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--------G~~~A~~~Lg~~y~~G~ 144 (348)
.++|..+|+++... ++. .....+|.++. ...+.++++.+++++.+. +......+||.+|.
T Consensus 71 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--- 146 (434)
T 4b4t_Q 71 KDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHY--- 146 (434)
T ss_dssp HHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH---
Confidence 56677777665441 222 12233444444 667778888888877753 22556777777775
Q ss_pred CCCCCccCHHHHHHHHHHHHhC--------CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 145 GGGKNEKDLRAGVALCARAASI--------GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~~--------G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
...++.+|...+.++... ..+.+...+|.+|.. ..|+.+|..+|++|-..
T Consensus 147 ----~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~ 204 (434)
T 4b4t_Q 147 ----QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHK----LRNLAKSKASLTAARTA 204 (434)
T ss_dssp ----HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred ----HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH----hCcHHHHHHHHHHHHHH
Confidence 456778888888877762 235567777777775 78888888888887654
No 212
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=87.63 E-value=2.7 Score=41.19 Aligned_cols=81 Identities=15% Similarity=0.017 Sum_probs=63.0
Q ss_pred ccCCHHHHHHHHHHHHhC-------CCH---HHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHh-----CC--C---H
Q 018965 110 CLQNRSSGTSLMAKAAMK-------SHA---PALYSLAVIQFNGSGGGKNEKDLRAGVALCARAAS-----IG--H---V 169 (348)
Q Consensus 110 ~~~d~~~A~~~~~~AA~~-------G~~---~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~-----~G--~---~ 169 (348)
...++++|+.+|+++-+. .|+ ..+.+||.+|.. .| ++++|..+|++|.+ .| + .
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g------~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQ------AYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hc------CHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 567889999999998764 344 578899999964 34 78999999999876 23 4 3
Q ss_pred HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 170 DAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 170 ~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
.++++||.+|.. ..++++|..+|++|.+
T Consensus 394 ~~l~nLa~~~~~----~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 394 MAVMRAGLTNWH----AGHIEVGHGMICKAYA 421 (490)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 478899999986 3478999999999964
No 213
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=87.44 E-value=3.8 Score=37.50 Aligned_cols=110 Identities=9% Similarity=0.042 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHC--CCHHHHHHhhhhhhhccC-----CHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccCCCCCCccCH
Q 018965 83 SAHRFLKRCVFA--GNLEACYTLGMIRFYCLQ-----NRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 83 ~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~-----d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
+++.++.++.+. .|..|...-+.+...... ..+++++++.++.+. ++..|.+.++.++..... ..
T Consensus 164 ~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~------~~ 237 (306)
T 3dra_A 164 KELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR------SI 237 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC------CG
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC------Ch
Confidence 677777777664 467777777776652111 267788888887754 477888888877755322 23
Q ss_pred HHHHHHHHHHHhCC-----CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 154 RAGVALCARAASIG-----HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 154 ~~A~~~~~kAA~~G-----~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
+.....+.+..+.+ ++.|...|+.+|.. ..+.++|++.|.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~----~~~~~~A~~~~~~l~~~ 287 (306)
T 3dra_A 238 TQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQ----QKKYNESRTVYDLLKSK 287 (306)
T ss_dssp GGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHc----cCCHHHHHHHHHHHHhc
Confidence 44445555555544 78888888888874 34788899999988864
No 214
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=86.93 E-value=2.2 Score=39.09 Aligned_cols=81 Identities=10% Similarity=-0.108 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHCC----CHHHHHHhhhhhhhc----cCCHHHHHHHHHHHHhCC---CHHHHHHHHHHHHccCCCCCC
Q 018965 81 SDSAHRFLKRCVFAG----NLEACYTLGMIRFYC----LQNRSSGTSLMAKAAMKS---HAPALYSLAVIQFNGSGGGKN 149 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G----~~~A~~~Lg~~y~~~----~~d~~~A~~~~~~AA~~G---~~~A~~~Lg~~y~~G~g~~~~ 149 (348)
..+|...+++|.+.. +..|+..||.+|..+ ..|.++|...|++|.+.+ ++.+.+.+|..|..-.
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~----- 253 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPL----- 253 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTT-----
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhc-----
Confidence 568888999988864 356999999999844 469999999999999754 4999999999986533
Q ss_pred ccCHHHHHHHHHHHHhCC
Q 018965 150 EKDLRAGVALCARAASIG 167 (348)
Q Consensus 150 ~~d~~~A~~~~~kAA~~G 167 (348)
.|.+.+.+++++|-...
T Consensus 254 -gd~~~a~~~L~kAL~a~ 270 (301)
T 3u64_A 254 -NNRAGFDEALDRALAID 270 (301)
T ss_dssp -TCHHHHHHHHHHHHHCC
T ss_pred -CCHHHHHHHHHHHHcCC
Confidence 48999999999997754
No 215
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.44 E-value=3.2 Score=38.44 Aligned_cols=77 Identities=9% Similarity=0.031 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHC----C----CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--------CCHHHHHHHHHHHHccC
Q 018965 81 SDSAHRFLKRCVFA----G----NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--------SHAPALYSLAVIQFNGS 144 (348)
Q Consensus 81 ~~~A~~~~~kaA~~----G----~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--------G~~~A~~~Lg~~y~~G~ 144 (348)
.+++..+++++.+. + -......||.+|. ..+++.+|+..++++... ....+...+|.+|.
T Consensus 111 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 186 (434)
T 4b4t_Q 111 LDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHY-QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYH--- 186 (434)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH-HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH---
Confidence 56677776665432 2 2456777777777 677788888888777632 23456667777774
Q ss_pred CCCCCccCHHHHHHHHHHHHh
Q 018965 145 GGGKNEKDLRAGVALCARAAS 165 (348)
Q Consensus 145 g~~~~~~d~~~A~~~~~kAA~ 165 (348)
...|+.+|..+|++|-.
T Consensus 187 ----~~~~~~~A~~~~~~al~ 203 (434)
T 4b4t_Q 187 ----KLRNLAKSKASLTAART 203 (434)
T ss_dssp ----HTTCHHHHHHHHHHHHH
T ss_pred ----HhCcHHHHHHHHHHHHH
Confidence 45677777777777754
No 216
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=86.25 E-value=4.3 Score=38.96 Aligned_cols=81 Identities=12% Similarity=-0.007 Sum_probs=63.1
Q ss_pred ccCCHHHHHHHHHHHHhC-------CC---HHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHh-----CC--C---H
Q 018965 110 CLQNRSSGTSLMAKAAMK-------SH---APALYSLAVIQFNGSGGGKNEKDLRAGVALCARAAS-----IG--H---V 169 (348)
Q Consensus 110 ~~~d~~~A~~~~~~AA~~-------G~---~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~-----~G--~---~ 169 (348)
...++++|+..|+++.+. .| ...+.+||..|.. .| ++++|..+++++.+ .| + .
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g------~~~eA~~~~~~~L~i~~~~lg~~Hp~~a 371 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LG------LLEEALFYGTRTMEPYRIFFPGSHPVRG 371 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HT------CHHHHHHHHHHHHHHHHHHSCSSCHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hc------cHHHHHHHHHHHHHhHHHHcCCCChHHH
Confidence 456889999999999864 24 3578899999964 33 78999999999875 23 3 3
Q ss_pred HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Q 018965 170 DAVRELGHCLQDGYGVRQNIEKGRRLLIEANA 201 (348)
Q Consensus 170 ~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~ 201 (348)
..+++||.+|.. .-++++|+.+|++|.+
T Consensus 372 ~~l~nLa~~~~~----~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 372 VQVMKVGKLQLH----QGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----cCCHHHHHHHHHHHHH
Confidence 478899999987 3478999999999974
No 217
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=85.52 E-value=0.49 Score=32.45 Aligned_cols=39 Identities=28% Similarity=0.702 Sum_probs=26.3
Q ss_pred cccccCCCCCCCCccccccccCCCCCceeecChHHHHHhchhhchhcCC
Q 018965 270 LRLCSYSGCGRPETRVHEYRRCSVCGKVNYCSRACQAIDWKTRHKRECV 318 (348)
Q Consensus 270 ~~~C~~~~C~~~~~~~~~l~~C~~C~~~~YCs~~CQ~~~W~~~Hk~~C~ 318 (348)
...|.. |...+. .....+|.+|. +.|||..|.+. || .|.
T Consensus 11 ~~~C~v--C~~~~~-~~akY~CPrC~-~rYCSl~C~k~-----Hk-~Cs 49 (59)
T 1x4s_A 11 AGPCGF--CPAGEV-QPARYTCPRCN-APYCSLRCYRT-----HG-TCA 49 (59)
T ss_dssp CEEECS--SCTTCC-EEECEECTTTC-CEESSHHHHHH-----HC-CGG
T ss_pred CCcCcC--CCCCcC-CCccccCcCCC-CCccChHHHHH-----Hh-HhC
Confidence 347875 764110 12348899998 89999999984 65 464
No 218
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=84.91 E-value=8.8 Score=38.17 Aligned_cols=117 Identities=10% Similarity=-0.001 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhh-hccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRF-YCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~-~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
.++++.++.++.+. .+..|.+.-+.++. ....+.++++.++.++.+.. +..|.+.-+.++..- | ...++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l-~-----~~~~~ 162 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQA-A-----VAPAE 162 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-C-----CCHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHc-C-----CChHH
Confidence 67899999999875 47889888888776 22336799999999999875 788999888887652 2 25789
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhc-c-C------C--CCCCHHHHHHHHHHHHhcC
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQD-G-Y------G--VRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~-G-~------G--v~~d~~~A~~w~~~Aa~~G 203 (348)
+++++.++.+. .+..|.++.+.++.. + . | ....+++++.++.+|....
T Consensus 163 el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~ 222 (567)
T 1dce_A 163 ELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTD 222 (567)
T ss_dssp HHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhC
Confidence 99999999876 689999999998765 1 1 1 1245789999999998654
No 219
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=82.31 E-value=14 Score=29.21 Aligned_cols=86 Identities=10% Similarity=0.020 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHC--CCHHHHHHhhhhhh--hccCCHHHHHHHHHHHHhCCCH----HHHHHHHHHHHccCCCCCCccCHH
Q 018965 83 SAHRFLKRCVFA--GNLEACYTLGMIRF--YCLQNRSSGTSLMAKAAMKSHA----PALYSLAVIQFNGSGGGKNEKDLR 154 (348)
Q Consensus 83 ~A~~~~~kaA~~--G~~~A~~~Lg~~y~--~~~~d~~~A~~~~~~AA~~G~~----~A~~~Lg~~y~~G~g~~~~~~d~~ 154 (348)
....-|.+..+. -+++++|+++..+. ..+.|..+++.+++.-...+++ +..|.||+-|.. -.|+.
T Consensus 19 ~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-------lg~Y~ 91 (126)
T 1nzn_A 19 KFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-------LKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-------TTCHH
T ss_pred HHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-------hhhHH
Confidence 445566666664 46899999999887 4556778899999999988755 588999988864 23899
Q ss_pred HHHHHHHHHHh--CCCHHHHHHH
Q 018965 155 AGVALCARAAS--IGHVDAVREL 175 (348)
Q Consensus 155 ~A~~~~~kAA~--~G~~~A~~~L 175 (348)
+|.+++...-+ -+|.+|+--.
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHH
Confidence 99999988754 4666666443
No 220
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=77.25 E-value=0.82 Score=41.55 Aligned_cols=47 Identities=28% Similarity=0.422 Sum_probs=37.3
Q ss_pred CCCCCCCCChHHHHHHHHHhhcCCCCHHHHHHHHHHhHHHHhccCCchhhcc
Q 018965 16 KPDLFDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLSQ 67 (348)
Q Consensus 16 ~~~~~~~l~~d~l~~il~~~a~~~~s~~d~~~~~l~~k~~~~~~~~~~~l~~ 67 (348)
+...|+.||+|++..||..+. ..|+.....+|+.|+....++..+..
T Consensus 5 ~~~~~~~LP~eil~~If~~L~-----~~d~~~~~~vc~~W~~~~~~~~~~~~ 51 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLC-----LPELLKVSGVCKRWYRLASDESLWQT 51 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSC-----HHHHHHTTSSCHHHHHHHTCSTTSSE
T ss_pred ccCChhhCCHHHHHHHHHhCC-----HHHHHHHHHHHHHHHHHhcCchhhee
Confidence 356789999999999999874 46999999999999999866554443
No 221
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=75.53 E-value=49 Score=30.44 Aligned_cols=123 Identities=12% Similarity=-0.044 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHccC--------CCCC
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMK--SHAPALYSLAVIQFNGS--------GGGK 148 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~--G~~~A~~~Lg~~y~~G~--------g~~~ 148 (348)
.++++.++.++.+. .|..|.+.-+.+........+++++++.++.+. .+..|.+..+.++..-. +. .
T Consensus 126 ~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~-~ 204 (331)
T 3dss_A 126 WARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGR-L 204 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------C-C
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccc-c
Confidence 46888888888775 578888888877652223368899999999876 47889999988875421 10 0
Q ss_pred CccCHHHHHHHHHHHHh--CCCHHHHHHHHHHHhccCCCC-------CCHHHHHHHHHHHHhcCC
Q 018965 149 NEKDLRAGVALCARAAS--IGHVDAVRELGHCLQDGYGVR-------QNIEKGRRLLIEANAREF 204 (348)
Q Consensus 149 ~~~d~~~A~~~~~kAA~--~G~~~A~~~Lg~~y~~G~Gv~-------~d~~~A~~w~~~Aa~~G~ 204 (348)
...-+.++++++.+|.. -+|..|-+++.-++..+.|.+ .-+++++.++.+..+...
T Consensus 205 ~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~p 269 (331)
T 3dss_A 205 PENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEP 269 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred chHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCc
Confidence 12347889999999985 478999988988888887743 235677777777765443
No 222
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=74.87 E-value=1.4 Score=41.42 Aligned_cols=46 Identities=26% Similarity=0.418 Sum_probs=38.1
Q ss_pred CCCCCCCCChHHHHHHHHHhhcCCCCHHHHHHHHHHhHHHHhccCCchhhc
Q 018965 16 KPDLFDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLS 66 (348)
Q Consensus 16 ~~~~~~~l~~d~l~~il~~~a~~~~s~~d~~~~~l~~k~~~~~~~~~~~l~ 66 (348)
....|+.||+|++..||..+ ++.|+..+..+|+.|+.+..++.++.
T Consensus 15 ~~d~~~~lp~e~~~~i~~~l-----~~~~l~~~~~v~~~~~~~~~~~~~w~ 60 (445)
T 2ovr_B 15 QRDFISLLPKELALYVLSFL-----EPKDLLQAAQTCRYWRILAEDNLLWR 60 (445)
T ss_dssp CCSTTTSSCHHHHHHHHTTS-----CHHHHHHHTTSCHHHHHHHTCSHHHH
T ss_pred cCChhHHCCHHHHHHHHHhC-----CHHHHHHHHHHhHHHHhhcCchhHhh
Confidence 34578899999999999877 57899999999999999887665443
No 223
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=73.50 E-value=19 Score=28.80 Aligned_cols=73 Identities=12% Similarity=0.017 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCCC---HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC--
Q 018965 129 HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIGH---VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE-- 203 (348)
Q Consensus 129 ~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G~---~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G-- 203 (348)
.++++|++|..+.... .+.|..+++..++.-...+. -+..|.|+.-+.. -.|+.+|+++....-+..
T Consensus 39 s~qt~F~yAw~Lv~S~----~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk----lgdY~~Ar~y~d~lL~~eP~ 110 (134)
T 3o48_A 39 TIQSRFNYAWGLIKST----DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK----LGEYSMAKRYVDTLFEHERN 110 (134)
T ss_dssp CHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHTTCTT
T ss_pred ChhhHHHHHHHHHcCC----CHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH----hhhHHHHHHHHHHHHhhCCC
Confidence 4566777776665543 35566777777766665432 4566777765543 347777777777665543
Q ss_pred CHHHHH
Q 018965 204 FFQSVS 209 (348)
Q Consensus 204 ~~~A~~ 209 (348)
|.+|+.
T Consensus 111 N~QA~~ 116 (134)
T 3o48_A 111 NKQVGA 116 (134)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 444443
No 224
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=72.08 E-value=16 Score=36.23 Aligned_cols=102 Identities=10% Similarity=-0.057 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcc-CC------CCCC
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNG-SG------GGKN 149 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G-~g------~~~~ 149 (348)
.++++.++.++.+. .|..|.+.-+.+........+++++++.++.+.. +..|.+..|.++..- .. +...
T Consensus 125 ~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~ 204 (567)
T 1dce_A 125 WARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLP 204 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSC
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccccccccccccc
Confidence 48899999999886 4788998888877633347889999999999875 789999999988651 11 0001
Q ss_pred ccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhcc
Q 018965 150 EKDLRAGVALCARAASI--GHVDAVRELGHCLQDG 182 (348)
Q Consensus 150 ~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G 182 (348)
...++++++++.+|... .+..+.++++.++..+
T Consensus 205 ~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~ 239 (567)
T 1dce_A 205 ENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRA 239 (567)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcC
Confidence 24579999999999864 6888999999988775
No 225
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=68.33 E-value=1.2 Score=42.02 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=35.2
Q ss_pred CCCCCChHHHHHHHHHhhcCCCCHHHHHHHHHHhHHHHhccCC-chhh
Q 018965 19 LFDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLR-PTVL 65 (348)
Q Consensus 19 ~~~~l~~d~l~~il~~~a~~~~s~~d~~~~~l~~k~~~~~~~~-~~~l 65 (348)
.+..||+|++..||..+ ++.|+.++..+|+.|+.+..+ +..+
T Consensus 14 ~~~~lp~~~~~~i~~~l-----~~~~l~~~~~v~~~w~~~~~~~~~~w 56 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYL-----QFEDIINSLGVSQNWNKIIRKSTSLW 56 (464)
T ss_dssp HHHHSCHHHHHHHHTTS-----CHHHHHHHHTTCHHHHHHHTTCHHHH
T ss_pred ChHHCCHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 45679999999999977 667999999999999998876 4443
No 226
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=67.13 E-value=9.1 Score=37.08 Aligned_cols=59 Identities=14% Similarity=0.040 Sum_probs=30.9
Q ss_pred CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCCCHH
Q 018965 95 GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIGHVD 170 (348)
Q Consensus 95 G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G~~~ 170 (348)
.+..+.+.+|..++ ..+..++|..+|.++ .....||.++.. -.+++.|++.|++| +++.
T Consensus 120 pn~~a~~~IGd~~~-~~g~yeeA~~~Y~~a------~n~~~LA~~L~~-------Lg~yq~AVea~~KA---~~~~ 178 (449)
T 1b89_A 120 PNNAHIQQVGDRCY-DEKMYDAAKLLYNNV------SNFGRLASTLVH-------LGEYQAAVDGARKA---NSTR 178 (449)
T ss_dssp C-----------------CTTTHHHHHHHT------TCHHHHHHHHHT-------TTCHHHHHHHHHHH---TCHH
T ss_pred CcHHHHHHHHHHHH-HcCCHHHHHHHHHHh------hhHHHHHHHHHH-------hccHHHHHHHHHHc---CCch
Confidence 34446666666655 566777888888876 356677777753 23688899999988 5673
No 227
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=66.62 E-value=2.5 Score=41.50 Aligned_cols=37 Identities=27% Similarity=0.395 Sum_probs=28.1
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCCHHHHHHHHHHhHHHHhc
Q 018965 18 DLFDALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRV 58 (348)
Q Consensus 18 ~~~~~l~~d~l~~il~~~a~~~~s~~d~~~~~l~~k~~~~~ 58 (348)
..++.||+|++..||..+. +..|.....++|+.|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~----~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQ----LDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCC----CHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcC----CchhHHHHHHHHHHHHHh
Confidence 4688999999999999885 467999999999999877
No 228
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=66.50 E-value=48 Score=26.74 Aligned_cols=73 Identities=12% Similarity=0.018 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCC---CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcC--
Q 018965 129 HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIG---HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANARE-- 203 (348)
Q Consensus 129 ~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G---~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G-- 203 (348)
.++++|+++..+.... .+.|..+++.+++.-...+ .-+..|.|+.-|.. -+|+.+|+++....-+..
T Consensus 38 s~~t~F~YAw~Lv~S~----~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk----l~~Y~~Ar~y~d~lL~~eP~ 109 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKST----DVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK----LGEYSMAKRYVDTLFEHERN 109 (144)
T ss_dssp CHHHHHHHHHHHHHSS----SHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHHcCC----CHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH----hhhHHHHHHHHHHHHhcCCC
Confidence 5667777777665543 3567777777777766532 35677888876654 458888888877766544
Q ss_pred CHHHHH
Q 018965 204 FFQSVS 209 (348)
Q Consensus 204 ~~~A~~ 209 (348)
|.+|+.
T Consensus 110 n~QA~~ 115 (144)
T 1y8m_A 110 NKQVGA 115 (144)
T ss_dssp CHHHHH
T ss_pred cHHHHH
Confidence 445543
No 229
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=65.42 E-value=13 Score=33.90 Aligned_cols=79 Identities=14% Similarity=-0.024 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHccCCCCCCccCH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS-----HAPALYSLAVIQFNGSGGGKNEKDL 153 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G-----~~~A~~~Lg~~y~~G~g~~~~~~d~ 153 (348)
.+++++++.++... +|..|.+.++.++.......+....+..+..+.+ ++.|...|+.+|.. .| +.
T Consensus 202 ~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~-~~------~~ 274 (306)
T 3dra_A 202 IDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQ-QK------KY 274 (306)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHH-TT------CH
T ss_pred HHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHc-cC------CH
Confidence 57899999988764 7999999999988733445566667788777755 88999999999973 23 78
Q ss_pred HHHHHHHHHHHhC
Q 018965 154 RAGVALCARAASI 166 (348)
Q Consensus 154 ~~A~~~~~kAA~~ 166 (348)
++|++.|.++++.
T Consensus 275 ~~A~~~~~~l~~~ 287 (306)
T 3dra_A 275 NESRTVYDLLKSK 287 (306)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999874
No 230
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=60.58 E-value=22 Score=33.47 Aligned_cols=87 Identities=5% Similarity=-0.167 Sum_probs=60.0
Q ss_pred CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCC-HHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCCCHHHH
Q 018965 94 AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSH-APALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIGHVDAV 172 (348)
Q Consensus 94 ~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~-~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G~~~A~ 172 (348)
..++.+...++.+++ ...+++.|+.++++|.+.+. ..+...+|.++.. .| ++++|.+.|.+|....-..-.
T Consensus 274 ~~~a~~~~alal~~l-~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~-~G------~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 274 NNLSIIYQIKAVSAL-VKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEM-KG------MNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp TTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHHSCSHHH
T ss_pred CcCHHHHHHHHHHHH-hCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-CC------CHHHHHHHHHHHHhcCCCcCh
Confidence 356777777877776 57899999999999998864 3344577877753 34 789999999999987543323
Q ss_pred HHHHHHHhccCCCCCCHHHH
Q 018965 173 RELGHCLQDGYGVRQNIEKG 192 (348)
Q Consensus 173 ~~Lg~~y~~G~Gv~~d~~~A 192 (348)
|. +..+....-|++.-
T Consensus 346 ~~----~~~~l~F~sn~~~i 361 (372)
T 3ly7_A 346 LY----WIENGIFQTSVPYV 361 (372)
T ss_dssp HH----HHHHSSSCCCHHHH
T ss_pred HH----HHhCceeecchhhh
Confidence 32 23334444455543
No 231
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=59.17 E-value=1.6 Score=40.99 Aligned_cols=44 Identities=30% Similarity=0.422 Sum_probs=35.4
Q ss_pred CCCCCCChH----HHHHHHHHhhcCCCCHHHHHHHHHHhHHHHhccCCchhhc
Q 018965 18 DLFDALPDD----LLECVLSKLISSAPSPSDFINVLLTCKRLNRVGLRPTVLS 66 (348)
Q Consensus 18 ~~~~~l~~d----~l~~il~~~a~~~~s~~d~~~~~l~~k~~~~~~~~~~~l~ 66 (348)
..|..||+| ++..||..+ ++.|+..+..+|+.|+.+..++..+.
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l-----~~~~l~~~~~v~~~w~~~~~~~~~w~ 56 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYL-----DAKSLCAAELVCKEWYRVTSDGMLWK 56 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTC-----CHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred ChHHHCCcchHHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 456679999 888888866 56799999999999999887655544
No 232
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=58.70 E-value=26 Score=34.33 Aligned_cols=74 Identities=20% Similarity=0.184 Sum_probs=53.6
Q ss_pred HHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHH--hCCCHHHHHHH
Q 018965 100 CYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAA--SIGHVDAVREL 175 (348)
Q Consensus 100 ~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA--~~G~~~A~~~L 175 (348)
...||.+.. -......|..||.+|+... +..++.+||+++.. .| |.-.|++||.++- ..-++.|.-+|
T Consensus 155 l~~LGDL~R-Y~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~-~~------~~l~a~y~y~rsl~~~~Pf~~a~~nL 226 (497)
T 1ya0_A 155 LVHLGDIAR-YRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS-KG------DHLTTIFYYCRSIAVKFPFPAASTNL 226 (497)
T ss_dssp HHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHH-TT------CHHHHHHHHHHHHSSSBCCHHHHHHH
T ss_pred HHHcccHHH-HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhc-cc------ccHHHHHHHHHHHhcCCCChhHHHHH
Confidence 345666644 1234688999999999763 66788999999854 23 6677889988875 45678888888
Q ss_pred HHHHhc
Q 018965 176 GHCLQD 181 (348)
Q Consensus 176 g~~y~~ 181 (348)
..++..
T Consensus 227 ~~~f~~ 232 (497)
T 1ya0_A 227 QKALSK 232 (497)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887754
No 233
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=54.12 E-value=2.7 Score=40.86 Aligned_cols=100 Identities=9% Similarity=-0.013 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC-CHHHHHHHHHHHHccCCCCCCccCHHHHHHH
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS-HAPALYSLAVIQFNGSGGGKNEKDLRAGVAL 159 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G-~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~ 159 (348)
.++|++.|.++ .|+.+.+.++..+. ...+.++|+.+|+++-+.. ++...+.|+.+|.. .| +..++..+
T Consensus 48 ~~eAIdsfika---~D~~~y~~V~~~ae-~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~K-lg------~l~e~e~f 116 (449)
T 1b89_A 48 VKEAIDSYIKA---DDPSSYMEVVQAAN-TSGNWEELVKYLQMARKKARESYVETELIFALAK-TN------RLAELEEF 116 (449)
T ss_dssp ------------------------------------------------------------------------CHHHHTTT
T ss_pred HHHHHHHHHcC---CCHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHH-hC------CHHHHHHH
Confidence 67888888875 67778888887766 5667888999888887642 33446677777754 23 66777777
Q ss_pred HHHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHH
Q 018965 160 CARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEA 199 (348)
Q Consensus 160 ~~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~A 199 (348)
+. .++..+...+|..|.+ ....++|..+|.++
T Consensus 117 ~~----~pn~~a~~~IGd~~~~----~g~yeeA~~~Y~~a 148 (449)
T 1b89_A 117 IN----GPNNAHIQQVGDRCYD----EKMYDAAKLLYNNV 148 (449)
T ss_dssp TT----CC--------------------CTTTHHHHHHHT
T ss_pred Hc----CCcHHHHHHHHHHHHH----cCCHHHHHHHHHHh
Confidence 75 3566688888886654 33444455555443
No 234
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=52.12 E-value=6.1 Score=27.78 Aligned_cols=15 Identities=40% Similarity=0.769 Sum_probs=12.6
Q ss_pred ceeecChHHHHHhch
Q 018965 296 KVNYCSRACQAIDWK 310 (348)
Q Consensus 296 ~~~YCs~~CQ~~~W~ 310 (348)
.+.|||+.|+..|-.
T Consensus 27 ~rPFCSeRCr~iDLg 41 (68)
T 1lv3_A 27 FRPFCSKRCQLIDLG 41 (68)
T ss_dssp CCSSSSHHHHHHHHS
T ss_pred CCcccCHHHHhhhHH
Confidence 467999999999854
No 235
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=50.83 E-value=81 Score=32.00 Aligned_cols=114 Identities=8% Similarity=0.003 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHCC----------CH------------HHHHHhhhhhh-hccCCHHHHHHHHHHHHhC-C--CHHHHH
Q 018965 81 SDSAHRFLKRCVFAG----------NL------------EACYTLGMIRF-YCLQNRSSGTSLMAKAAMK-S--HAPALY 134 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G----------~~------------~A~~~Lg~~y~-~~~~d~~~A~~~~~~AA~~-G--~~~A~~ 134 (348)
.++|...|+++.+.. .| .+...+..+.+ -...+.+.|...|.+|-+. + ......
T Consensus 394 ~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi 473 (679)
T 4e6h_A 394 IPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYL 473 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHH
Confidence 678888898887642 11 11122222222 2345789999999999877 3 234444
Q ss_pred HHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 135 SLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 135 ~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
..+.+...- ..|.++|...|+++.+. .++.-...++.+... ..|.+.|+.||++|.....
T Consensus 474 ~~A~lE~~~------~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~----~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 474 ENAYIEYHI------SKDTKTACKVLELGLKYFATDGEYINKYLDFLIY----VNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHHHHHHTT------TSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHTTTSS
T ss_pred HHHHHHHHh------CCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh----CCCHHHHHHHHHHHHHhcC
Confidence 555554432 23678999999999875 233333334443322 2389999999999998765
No 236
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=48.68 E-value=1.6e+02 Score=29.81 Aligned_cols=112 Identities=5% Similarity=0.001 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHC-C--CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 81 SDSAHRFLKRCVFA-G--NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 81 ~~~A~~~~~kaA~~-G--~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
.+.|...|.+|.+. + ........+.+.+....|.+.|...|+++.+.= ++.-...++.+. ...| |.++
T Consensus 450 l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe-~~~~------~~~~ 522 (679)
T 4e6h_A 450 LAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFL-IYVN------EESQ 522 (679)
T ss_dssp HHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHT------CHHH
T ss_pred HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHH-HhCC------CHHH
Confidence 67899999999876 3 234444445554444567899999999998862 233222333322 2233 7899
Q ss_pred HHHHHHHHHhCCC----HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Q 018965 156 GVALCARAASIGH----VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAR 202 (348)
Q Consensus 156 A~~~~~kAA~~G~----~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~ 202 (348)
|..||++|..... ..-.+..=.-|+.-.| |.+.+...++++.+.
T Consensus 523 AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G---~~~~~~~v~~R~~~~ 570 (679)
T 4e6h_A 523 VKSLFESSIDKISDSHLLKMIFQKVIFFESKVG---SLNSVRTLEKRFFEK 570 (679)
T ss_dssp HHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTC---CSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHh
Confidence 9999999998764 3334444344555555 445566666666543
No 237
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=39.92 E-value=1.4e+02 Score=23.88 Aligned_cols=74 Identities=5% Similarity=0.055 Sum_probs=55.7
Q ss_pred CCHHHHHHhhhhhh--hccCCHHHHHHHHHHHHhCC---CHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--C
Q 018965 95 GNLEACYTLGMIRF--YCLQNRSSGTSLMAKAAMKS---HAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--G 167 (348)
Q Consensus 95 G~~~A~~~Lg~~y~--~~~~d~~~A~~~~~~AA~~G---~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G 167 (348)
=+++++|+++..+. ....|..+++.+++.-...+ .-+-.|.||+-|.. -.|+.+|.++....-+. +
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-------l~~Y~~Ar~y~d~lL~~eP~ 109 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-------LGEYSMAKRYVDTLFEHERN 109 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-------TTCHHHHHHHHHHHHHTCCC
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-------hhhHHHHHHHHHHHHhcCCC
Confidence 47789999988877 45667889999999888754 34688888888763 34899999998887654 5
Q ss_pred CHHHHHHH
Q 018965 168 HVDAVREL 175 (348)
Q Consensus 168 ~~~A~~~L 175 (348)
|.+|+--.
T Consensus 110 n~QA~~Lk 117 (144)
T 1y8m_A 110 NKQVGALK 117 (144)
T ss_dssp CHHHHHHH
T ss_pred cHHHHHHH
Confidence 66666443
No 238
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=36.90 E-value=2.9e+02 Score=26.47 Aligned_cols=113 Identities=9% Similarity=-0.029 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHCC---CHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCC---HHHHHHHHHHHHccCCCCCCccCHH
Q 018965 81 SDSAHRFLKRCVFAG---NLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSH---APALYSLAVIQFNGSGGGKNEKDLR 154 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G---~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~---~~A~~~Lg~~y~~G~g~~~~~~d~~ 154 (348)
.++|+.+|..-.+.| |...+..|-..|. ...+.++|+++|+.--+.|. ......|=..|.. .| +.+
T Consensus 86 l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~-~g------~~~ 157 (501)
T 4g26_A 86 LSRGFDIFKQMIVDKVVPNEATFTNGARLAV-AKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR-KG------DAD 157 (501)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-TT------CHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHH-CC------CHH
Confidence 578999999888887 4445444444444 66789999999999988884 3333333223321 23 789
Q ss_pred HHHHHHHHHHhCCC---HHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCH
Q 018965 155 AGVALCARAASIGH---VDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREFF 205 (348)
Q Consensus 155 ~A~~~~~kAA~~G~---~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~~ 205 (348)
+|.++|..-.+.|. ......|-..|.. ..+.++|.++|++--+.|..
T Consensus 158 ~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~----~g~~d~A~~ll~~Mr~~g~~ 207 (501)
T 4g26_A 158 KAYEVDAHMVESEVVPEEPELAALLKVSMD----TKNADKVYKTLQRLRDLVRQ 207 (501)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHhh----CCCHHHHHHHHHHHHHhCCC
Confidence 99999999888884 3333333333332 45788999999988877764
No 239
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=36.83 E-value=2.5e+02 Score=25.77 Aligned_cols=114 Identities=12% Similarity=0.117 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhh------hccCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHH----ccC-C
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRF------YCLQNRSSGTSLMAKAA----MKSHAPALYSLAVIQF----NGS-G 145 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~------~~~~d~~~A~~~~~~AA----~~G~~~A~~~Lg~~y~----~G~-g 145 (348)
.++-+.=++...+.|+.+-+|..-++|. -..+++.+|++++...| +.|...+--.|+.++. ... -
T Consensus 12 ~~~~i~rl~~~I~~G~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~ 91 (336)
T 3lpz_A 12 IERIIARLQRRIAEGQPEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQR 91 (336)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCC
Confidence 4566777888888888754454444443 24567888888877766 4466665556664442 111 0
Q ss_pred CC------------CCcc-C------HHHHHHHHHHHH--hCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHH
Q 018965 146 GG------------KNEK-D------LRAGVALCARAA--SIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIE 198 (348)
Q Consensus 146 ~~------------~~~~-d------~~~A~~~~~kAA--~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~ 198 (348)
-+ ..+. + ..+|+.|-.+.- ..|+++-...+|..|... .++.+|...|-.
T Consensus 92 ~~~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e----~~~~~Ae~H~il 161 (336)
T 3lpz_A 92 VDGASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEE----GEFEAAEKHLVL 161 (336)
T ss_dssp CCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHT----TCHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHcc----CCHHHHHHHHHh
Confidence 00 0111 1 357888988754 579999999999999874 588888888853
No 240
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=36.25 E-value=2.5e+02 Score=25.54 Aligned_cols=117 Identities=9% Similarity=-0.025 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhc-cCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYC-LQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~-~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
.++++.++.++... .|..+.+.-+.++... ..+..+++.++.++.+.. +..|.+.-+.++..- | ...++
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l-~-----~~~~e 163 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQA-A-----VAPAE 163 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-T-----CCHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh-C-----cCHHH
Confidence 46888999988874 5888988888877622 236899999999999875 788988888877542 2 13578
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhccCC---------C-CCCHHHHHHHHHHHHhcC
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQDGYG---------V-RQNIEKGRRLLIEANARE 203 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~G---------v-~~d~~~A~~w~~~Aa~~G 203 (348)
+++++.++.+. .|..|-++.+.++..-.. + ...+.+++.++.+|....
T Consensus 164 el~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~ 223 (331)
T 3dss_A 164 ELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTD 223 (331)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhC
Confidence 99999999875 789999999987754211 1 134778999999998544
No 241
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=34.32 E-value=3.5e+02 Score=26.68 Aligned_cols=85 Identities=16% Similarity=0.121 Sum_probs=52.0
Q ss_pred CCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCCCHHHHH
Q 018965 94 AGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIGHVDAVR 173 (348)
Q Consensus 94 ~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G~~~A~~ 173 (348)
..++...-.||.+++ ...|.+.|.+.|.++ |+......|-.. .| |.++..+.-+.|...|+....+
T Consensus 678 ~~~~~~W~~la~~al-~~~~~~~A~~~y~~~---~d~~~l~~l~~~----~~------~~~~~~~~~~~a~~~~~~~~A~ 743 (814)
T 3mkq_A 678 ESAEMKWRALGDASL-QRFNFKLAIEAFTNA---HDLESLFLLHSS----FN------NKEGLVTLAKDAETTGKFNLAF 743 (814)
T ss_dssp CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHH---TCHHHHHHHHHH----TT------CHHHHHHHHHHHHHTTCHHHHH
T ss_pred hCcHhHHHHHHHHHH-HcCCHHHHHHHHHHc---cChhhhHHHHHH----cC------CHHHHHHHHHHHHHcCchHHHH
Confidence 345666667777777 677888888888876 555544333222 23 4555555666666677776655
Q ss_pred HHHHHHhccCCCCCCHHHHHHHHHHH
Q 018965 174 ELGHCLQDGYGVRQNIEKGRRLLIEA 199 (348)
Q Consensus 174 ~Lg~~y~~G~Gv~~d~~~A~~w~~~A 199 (348)
.+. +.. .|+++|++.|.+.
T Consensus 744 ~~~--~~~-----g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 744 NAY--WIA-----GDIQGAKDLLIKS 762 (814)
T ss_dssp HHH--HHH-----TCHHHHHHHHHHT
T ss_pred HHH--HHc-----CCHHHHHHHHHHc
Confidence 552 112 2777887777654
No 242
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=33.62 E-value=1.8e+02 Score=23.05 Aligned_cols=73 Identities=5% Similarity=0.052 Sum_probs=53.4
Q ss_pred CHHHHHHhhhhhh--hccCCHHHHHHHHHHHHhCCC---HHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhC--CC
Q 018965 96 NLEACYTLGMIRF--YCLQNRSSGTSLMAKAAMKSH---APALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASI--GH 168 (348)
Q Consensus 96 ~~~A~~~Lg~~y~--~~~~d~~~A~~~~~~AA~~G~---~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~--G~ 168 (348)
.+.++|+++..+. ....|..+++.+++.-...+. -+-.|.||+-+.. -.|+.+|.++....-+. +|
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk-------lgdY~~Ar~y~d~lL~~eP~N 111 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-------LGEYSMAKRYVDTLFEHERNN 111 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-------HTCHHHHHHHHHHHHTTCTTC
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH-------hhhHHHHHHHHHHHHhhCCCC
Confidence 5788999988777 445577899999988887653 4568888877753 24889999998887664 56
Q ss_pred HHHHHHH
Q 018965 169 VDAVREL 175 (348)
Q Consensus 169 ~~A~~~L 175 (348)
.+|+--.
T Consensus 112 ~QA~~Lk 118 (134)
T 3o48_A 112 KQVGALK 118 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665433
No 243
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=32.95 E-value=78 Score=25.74 Aligned_cols=40 Identities=25% Similarity=0.273 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCCCHHHHHHHH
Q 018965 130 APALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIGHVDAVRELG 176 (348)
Q Consensus 130 ~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G~~~A~~~Lg 176 (348)
|+-.+.||..|.. .| |..+|-+++.+|.+.|-.+|..++-
T Consensus 125 ~~~l~kia~Ay~K-lg------~~r~a~eLl~~AC~kG~kEAC~~in 164 (172)
T 1wy6_A 125 ASILVAIANALRR-VG------DERDATTLLIEACKKGEKEACNAVN 164 (172)
T ss_dssp HHHHHHHHHHHHH-TT------CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHH-hc------chhhHHHHHHHHHHhhhHHHHHHHH
Confidence 5556666666632 23 5566666777777777766665543
No 244
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=31.71 E-value=14 Score=36.14 Aligned_cols=34 Identities=29% Similarity=0.482 Sum_probs=29.5
Q ss_pred CCCChHHHHHHHHHhhcCCCCHHHHHHHHHHhHHHHhc
Q 018965 21 DALPDDLLECVLSKLISSAPSPSDFINVLLTCKRLNRV 58 (348)
Q Consensus 21 ~~l~~d~l~~il~~~a~~~~s~~d~~~~~l~~k~~~~~ 58 (348)
..||+|++..||..+. ++.|.....++|+.|+..
T Consensus 14 ~~LPdeil~~I~~~L~----~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYIT----DPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCC----CHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcC----CHHHHHHHHHHhHHHHHh
Confidence 3599999999999884 568999999999999876
No 245
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=31.46 E-value=63 Score=26.75 Aligned_cols=27 Identities=11% Similarity=-0.137 Sum_probs=20.7
Q ss_pred HHHHhhhhhhhccCCHHHHHHHHHHHHh
Q 018965 99 ACYTLGMIRFYCLQNRSSGTSLMAKAAM 126 (348)
Q Consensus 99 A~~~Lg~~y~~~~~d~~~A~~~~~~AA~ 126 (348)
+++.+|..++ ..+++.+|...|++|-.
T Consensus 65 ~l~~ladalf-~~~eyrrA~~~y~qALq 91 (167)
T 3ffl_A 65 LLVYHADSLF-HDKEYRNAVSKYTMALQ 91 (167)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cccHHHHHHHHHHHHHH
Confidence 6677777776 68888888888888743
No 246
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=30.86 E-value=91 Score=30.38 Aligned_cols=61 Identities=8% Similarity=0.047 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHh--CCCHHHHHHHHHHHHc
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAM--KSHAPALYSLAVIQFN 142 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~--~G~~~A~~~Lg~~y~~ 142 (348)
.+.|..||.+|+.. ++...+..||.+.. ...|.-.|+.||.+|.- .-++.|.-+|..++..
T Consensus 168 ~~~A~~~Y~~A~~~~P~~G~~~nqLavla~-~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 168 TSQAESYYRHAAQLVPSNGQPYNQLAILAS-SKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHHHCTTBSHHHHHHHHHHH-HTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHHh-cccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 57999999999986 57789999999987 46688889999998864 4577888899888854
No 247
>1ihs_I Hirutonin; hydrolase(serine proteinase), hydrolase-hydrolase inhibitor; HET: DPN OPR; 2.00A {Homo sapiens}
Probab=29.08 E-value=36 Score=18.60 Aligned_cols=18 Identities=17% Similarity=0.498 Sum_probs=14.3
Q ss_pred cCCCCCCCCCChHHHHHH
Q 018965 14 VEKPDLFDALPDDLLECV 31 (348)
Q Consensus 14 ~~~~~~~~~l~~d~l~~i 31 (348)
+++-..|+.||++.+...
T Consensus 6 shn~gDFe~IPEeYl~~~ 23 (26)
T 1ihs_I 6 SHNDGDFEEIPEEYLQXX 23 (26)
T ss_pred cCCCCCCCcCCHHHHhhh
Confidence 577889999999976543
No 248
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=28.16 E-value=1.3e+02 Score=23.15 Aligned_cols=32 Identities=13% Similarity=0.004 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHHHh
Q 018965 81 SDSAHRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKAAM 126 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~ 126 (348)
.++|+.++++|.+. -...++++|+.+|..|++
T Consensus 15 l~kAi~lv~~Ave~--------------D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 15 LQKAIDLASKAAQE--------------DKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHH--------------HHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--------------HHccCHHHHHHHHHHHHH
Confidence 45666666666421 134667777777777754
No 249
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=26.62 E-value=3.7e+02 Score=24.58 Aligned_cols=123 Identities=7% Similarity=-0.009 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHhhhhhhhc-cCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHc-cCCCCCCccCHH
Q 018965 81 SDSAHRFLKRCVFA--GNLEACYTLGMIRFYC-LQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFN-GSGGGKNEKDLR 154 (348)
Q Consensus 81 ~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~-~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~-G~g~~~~~~d~~ 154 (348)
.++++.++.++... .+..+.+.-+.++... ..++.+++.++.++.+.. +..|.+.-+.++.. |.-.........
T Consensus 105 l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~ 184 (349)
T 3q7a_A 105 LEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWG 184 (349)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHH
Confidence 67899999998875 5788888888887633 237789999999999775 67788877766643 221000123456
Q ss_pred HHHHHHHHHHhC--CCHHHHHHHHHHHhccCC---CCCCHHHHHHHHHHHHhcC
Q 018965 155 AGVALCARAASI--GHVDAVRELGHCLQDGYG---VRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 155 ~A~~~~~kAA~~--G~~~A~~~Lg~~y~~G~G---v~~d~~~A~~w~~~Aa~~G 203 (348)
++++++.++.+. .|..|-++.+.++..-.+ ....+++++.++.++....
T Consensus 185 eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~ 238 (349)
T 3q7a_A 185 SELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLI 238 (349)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhC
Confidence 899999999875 689999999998866332 2223678999999987543
No 250
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=22.24 E-value=5.1e+02 Score=24.64 Aligned_cols=113 Identities=10% Similarity=0.035 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHCCC---HHHHHHhhhhhh--h------ccCCHHHHHHHHHHHHhCC---CHHHHHHHHHHHHccCCC
Q 018965 81 SDSAHRFLKRCVFAGN---LEACYTLGMIRF--Y------CLQNRSSGTSLMAKAAMKS---HAPALYSLAVIQFNGSGG 146 (348)
Q Consensus 81 ~~~A~~~~~kaA~~G~---~~A~~~Lg~~y~--~------~~~d~~~A~~~~~~AA~~G---~~~A~~~Lg~~y~~G~g~ 146 (348)
.++|+++|...-+.|- ...+..|=..+. + ...+.++|++.|..--+.| +......|-..|..
T Consensus 42 ~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~---- 117 (501)
T 4g26_A 42 VLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVA---- 117 (501)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh----
Confidence 6788888888887773 333333322222 1 1234788999999888888 34444444444432
Q ss_pred CCCccCHHHHHHHHHHHHhCC---CHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCC
Q 018965 147 GKNEKDLRAGVALCARAASIG---HVDAVRELGHCLQDGYGVRQNIEKGRRLLIEANAREF 204 (348)
Q Consensus 147 ~~~~~d~~~A~~~~~kAA~~G---~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~Aa~~G~ 204 (348)
..+.++|+++|..--+.| +......|=..|.. ..+.++|.++|..-.+.|.
T Consensus 118 ---~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~----~g~~~~A~~l~~~M~~~G~ 171 (501)
T 4g26_A 118 ---KDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR----KGDADKAYEVDAHMVESEV 171 (501)
T ss_dssp ---HTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTTC
T ss_pred ---cCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHH----CCCHHHHHHHHHHHHhcCC
Confidence 237789999999888877 33443333333332 3477888888888877775
No 251
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=20.96 E-value=4.8e+02 Score=23.82 Aligned_cols=119 Identities=9% Similarity=-0.090 Sum_probs=87.7
Q ss_pred cHHHHHHHHHHHHHC--CCHHHHHHhhhhhhhccCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHccCCCCCCccCHHH
Q 018965 80 WSDSAHRFLKRCVFA--GNLEACYTLGMIRFYCLQNRSSGTSLMAKAAMKS--HAPALYSLAVIQFNGSGGGKNEKDLRA 155 (348)
Q Consensus 80 ~~~~A~~~~~kaA~~--G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~AA~~G--~~~A~~~Lg~~y~~G~g~~~~~~d~~~ 155 (348)
..++|+.++.++.+. .+..+.+.-+.++.....+.++++.++.++.... +..+.+.-+.++....+ .++.+
T Consensus 69 ~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~-----~~~~~ 143 (349)
T 3q7a_A 69 KSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISP-----QDPVS 143 (349)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCC-----SCCHH
T ss_pred CCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC-----CChHH
Confidence 356788999888776 5788888888887644457999999999999765 78899999988876423 14579
Q ss_pred HHHHHHHHHhC--CCHHHHHHHHHHHhc-c-CC--CCCCHHHHHHHHHHHHhcC
Q 018965 156 GVALCARAASI--GHVDAVRELGHCLQD-G-YG--VRQNIEKGRRLLIEANARE 203 (348)
Q Consensus 156 A~~~~~kAA~~--G~~~A~~~Lg~~y~~-G-~G--v~~d~~~A~~w~~~Aa~~G 203 (348)
++..+.++.+. .|..|-+.-+.++.. | .. ......+++.++.++.+..
T Consensus 144 EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~d 197 (349)
T 3q7a_A 144 EIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVD 197 (349)
T ss_dssp HHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhC
Confidence 99999999976 478888777766543 2 11 1223458888888887653
No 252
>5gds_I Hirunorm V; serine protease-inhibitor complex, thrombin, thrombin synthe inhibitors, antithrombotics, hirunorms; HET: CHG NAL ALC DGL NAG; 2.10A {Homo sapiens} PDB: 4thn_I*
Probab=20.84 E-value=36 Score=18.63 Aligned_cols=15 Identities=7% Similarity=0.233 Sum_probs=12.3
Q ss_pred cCCCCCCCCCChHHH
Q 018965 14 VEKPDLFDALPDDLL 28 (348)
Q Consensus 14 ~~~~~~~~~l~~d~l 28 (348)
+++...|+.||++.+
T Consensus 11 shn~gDfe~IPeeYl 25 (26)
T 5gds_I 11 SHXGGDYEEIPAAYX 25 (26)
T ss_pred cccCCCcccCcHhhc
Confidence 577889999999864
No 253
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=20.55 E-value=2.5e+02 Score=22.81 Aligned_cols=90 Identities=14% Similarity=0.027 Sum_probs=43.4
Q ss_pred ccCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHccCCCCCCccCHHHHHHHHHHHHhCCCHHHHHHHHHHHhccCCCCCCH
Q 018965 110 CLQNRSSGTSLMAKAAMKSHAPALYSLAVIQFNGSGGGKNEKDLRAGVALCARAASIGHVDAVRELGHCLQDGYGVRQNI 189 (348)
Q Consensus 110 ~~~d~~~A~~~~~~AA~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A~~~~~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~ 189 (348)
.-+|...-++.|-+. |-..-.+.||.-++.-.| -...+++-..=+.+ -++-+++-.+.||..|.. .| |.
T Consensus 73 ~C~NlKrVi~C~~~~---n~~se~vd~ALd~lv~~~---KkDqLdki~~~~l~-n~~~~~~~l~kia~Ay~K-lg---~~ 141 (172)
T 1wy6_A 73 KCQNLKSVVECGVIN---NTLNEHVNKALDILVIQG---KRDKLEEIGREILK-NNEVSASILVAIANALRR-VG---DE 141 (172)
T ss_dssp GCSCTHHHHHHHHHT---TCCCHHHHHHHHHHHHTT---CHHHHHHHHHHHC---CCSCHHHHHHHHHHHHH-TT---CH
T ss_pred hhhcHHHHHHHHHHh---cchHHHHHHHHHHHHHhc---cHhHHHHHHHHHhc-cCCCChHHHHHHHHHHHH-hc---ch
Confidence 445555555555443 333344555555554444 22222222111101 222346666666666654 23 45
Q ss_pred HHHHHHHHHHHhcCCHHHHHh
Q 018965 190 EKGRRLLIEANAREFFQSVSK 210 (348)
Q Consensus 190 ~~A~~w~~~Aa~~G~~~A~~~ 210 (348)
.+|-.++.+|.+.|-.+|-.+
T Consensus 142 r~a~eLl~~AC~kG~kEAC~~ 162 (172)
T 1wy6_A 142 RDATTLLIEACKKGEKEACNA 162 (172)
T ss_dssp HHHHHHHHHHHHTTCHHHHHH
T ss_pred hhHHHHHHHHHHhhhHHHHHH
Confidence 566666666666666666554
No 254
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=20.31 E-value=2.9e+02 Score=21.10 Aligned_cols=100 Identities=13% Similarity=0.031 Sum_probs=59.7
Q ss_pred HHHHHHHHHCCCHHHHHHhhhhhhhccCCHHHHHHHHHHH---HhCCCHHHHHHHHHHHHccCCCCCCccCHHHH---HH
Q 018965 85 HRFLKRCVFAGNLEACYTLGMIRFYCLQNRSSGTSLMAKA---AMKSHAPALYSLAVIQFNGSGGGKNEKDLRAG---VA 158 (348)
Q Consensus 85 ~~~~~kaA~~G~~~A~~~Lg~~y~~~~~d~~~A~~~~~~A---A~~G~~~A~~~Lg~~y~~G~g~~~~~~d~~~A---~~ 158 (348)
...+.+-.+.|.|......++.-.| . |.++|++|+..= -+.|..+....-.+-.. + + +..++ .+
T Consensus 9 ~~~v~~l~~MGFp~~~~~kAl~~~g-~-~~e~amewL~~h~~L~d~~~d~~~~e~~l~~~-~-~------~~~~~~~~~~ 78 (118)
T 4ae4_A 9 RQCVETVVNMGYSYECVLRAMKAAG-A-NIEQILDYLFAHGQLCEKGFDPLLVEEALEMH-Q-C------SEEKMMEFLQ 78 (118)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHC-S-CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHC-S-S------CHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHC-c-CHHHHHHHHHHhchhcccCCChhhhHHHHHhc-c-C------CccccccCHH
Confidence 3466777888988888877776654 3 899999998653 24554333322222111 1 1 11122 22
Q ss_pred HHHHHHhCCCHHHHHHHHHHHhccCCCCCCHHHHHHHHHHH
Q 018965 159 LCARAASIGHVDAVRELGHCLQDGYGVRQNIEKGRRLLIEA 199 (348)
Q Consensus 159 ~~~kAA~~G~~~A~~~Lg~~y~~G~Gv~~d~~~A~~w~~~A 199 (348)
...+-.+.|....+..-+....+| |.++|+.|+..-
T Consensus 79 ~v~~L~eMGF~~~~a~~AL~~~~n-----d~erAlewL~~~ 114 (118)
T 4ae4_A 79 LMSKFKEMGFELKDIKEVLLLHNN-----DQDNALEDLMAR 114 (118)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHTTT-----CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHcCC-----CHHHHHHHHHHh
Confidence 344445667777776666665543 889999988653
Done!