Query 018967
Match_columns 348
No_of_seqs 278 out of 2291
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 08:49:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018967.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018967hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozl_A PDHE1-A type I, pyruvat 100.0 8.2E-78 2.8E-82 590.2 34.0 311 34-347 6-318 (365)
2 1qs0_A 2-oxoisovalerate dehydr 100.0 1.2E-70 4.1E-75 546.2 32.0 291 55-347 67-361 (407)
3 1w85_A Pyruvate dehydrogenase 100.0 2E-68 6.9E-73 524.4 34.1 282 55-347 37-322 (368)
4 2bfd_A 2-oxoisovalerate dehydr 100.0 1.3E-68 4.5E-73 531.0 32.8 292 55-347 48-342 (400)
5 1umd_A E1-alpha, 2-OXO acid de 100.0 2.6E-64 9E-69 495.3 34.6 290 56-347 30-323 (367)
6 2yic_A 2-oxoglutarate decarbox 100.0 1.8E-60 6.2E-65 509.3 20.2 308 33-347 84-438 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 3.1E-59 1.1E-63 510.4 21.4 308 33-347 329-683 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 7.2E-58 2.4E-62 491.8 23.5 296 45-347 183-510 (933)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 4E-32 1.4E-36 283.0 18.8 233 46-299 10-291 (621)
10 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 3.1E-31 1.1E-35 276.6 12.0 230 47-297 13-294 (629)
11 1gpu_A Transketolase; transfer 99.9 1E-26 3.4E-31 244.5 21.8 236 71-321 12-281 (680)
12 2e6k_A Transketolase; structur 99.9 1.1E-26 3.7E-31 243.2 17.3 153 163-321 111-281 (651)
13 3rim_A Transketolase, TK; TPP, 99.9 5.5E-26 1.9E-30 238.7 20.1 149 164-315 127-296 (700)
14 2r8o_A Transketolase 1, TK 1; 99.9 9.9E-26 3.4E-30 236.6 21.0 151 163-316 107-275 (669)
15 1r9j_A Transketolase; domains, 99.9 1.2E-25 4.1E-30 235.9 19.5 150 164-316 110-277 (673)
16 1itz_A Transketolase; calvin c 99.9 7.1E-25 2.4E-29 230.3 20.9 245 55-316 7-289 (675)
17 3mos_A Transketolase, TK; thia 99.9 4.4E-24 1.5E-28 222.1 25.2 143 156-303 107-253 (616)
18 2qtc_A Pyruvate dehydrogenase 99.9 3.6E-24 1.2E-28 229.7 22.8 264 44-316 58-422 (886)
19 3kom_A Transketolase; rossmann 99.9 4E-24 1.4E-28 223.8 19.5 148 164-314 110-275 (663)
20 3l84_A Transketolase; TKT, str 99.9 5.4E-24 1.9E-28 221.7 19.9 236 61-314 3-268 (632)
21 3uk1_A Transketolase; structur 99.9 4.2E-24 1.4E-28 224.9 16.2 148 164-315 149-314 (711)
22 3m49_A Transketolase; alpha-be 99.9 2.4E-23 8.1E-28 218.6 19.0 149 164-315 134-300 (690)
23 4feg_A Pyruvate oxidase; carba 99.9 5E-23 1.7E-27 213.5 10.7 162 168-339 418-597 (603)
24 1v5e_A Pyruvate oxidase; oxido 99.6 6.2E-16 2.1E-20 159.9 10.8 119 168-294 411-541 (590)
25 2pan_A Glyoxylate carboligase; 99.6 9.2E-16 3.2E-20 159.2 8.9 120 167-294 439-582 (616)
26 2uz1_A Benzaldehyde lyase; thi 99.6 1.9E-15 6.6E-20 155.2 8.9 116 168-292 417-546 (563)
27 2vk8_A Pyruvate decarboxylase 99.6 1.4E-15 4.8E-20 156.1 6.8 120 167-292 410-542 (563)
28 1ozh_A ALS, acetolactate synth 99.6 2.4E-15 8.1E-20 154.8 7.8 116 167-293 417-544 (566)
29 1q6z_A BFD, BFDC, benzoylforma 99.6 2.1E-15 7.3E-20 153.6 7.3 112 170-292 401-525 (528)
30 2iht_A Carboxyethylarginine sy 99.6 3.9E-15 1.3E-19 153.2 7.9 114 168-292 434-561 (573)
31 1ybh_A Acetolactate synthase, 99.5 7.1E-15 2.4E-19 151.8 9.2 119 167-296 423-562 (590)
32 2pgn_A Cyclohexane-1,2-dione h 99.5 5.2E-15 1.8E-19 152.9 8.1 119 168-297 422-552 (589)
33 1t9b_A Acetolactate synthase, 99.5 6.3E-15 2.1E-19 154.9 8.7 118 167-295 510-640 (677)
34 3eya_A Pyruvate dehydrogenase 99.5 1.3E-14 4.5E-19 148.6 9.9 116 168-294 404-531 (549)
35 2vbf_A Branched-chain alpha-ke 99.5 1.5E-14 5.2E-19 148.7 9.4 116 167-292 422-551 (570)
36 2vbi_A Pyruvate decarboxylase; 99.5 9.8E-15 3.3E-19 150.0 7.7 116 167-292 406-533 (566)
37 1ovm_A Indole-3-pyruvate decar 99.5 9.5E-15 3.2E-19 149.5 7.5 115 167-292 405-532 (552)
38 2wvg_A PDC, pyruvate decarboxy 99.5 1.9E-14 6.3E-19 148.0 8.8 116 167-292 410-541 (568)
39 2nxw_A Phenyl-3-pyruvate decar 99.5 1.8E-14 6E-19 148.2 7.2 114 168-292 420-542 (565)
40 2c31_A Oxalyl-COA decarboxylas 99.5 6.3E-14 2.2E-18 144.0 10.6 115 167-293 423-548 (568)
41 2q28_A Oxalyl-COA decarboxylas 99.5 1.3E-13 4.5E-18 141.5 11.4 116 167-294 418-546 (564)
42 3hww_A 2-succinyl-5-enolpyruvy 99.4 4.8E-14 1.7E-18 144.7 6.3 113 167-292 414-539 (556)
43 3ahc_A Phosphoketolase, xylulo 99.4 4.8E-13 1.6E-17 142.1 12.8 139 156-298 161-333 (845)
44 2x7j_A 2-succinyl-5-enolpyruvy 99.4 6.2E-14 2.1E-18 145.2 4.0 112 169-292 454-580 (604)
45 3lq1_A 2-succinyl-5-enolpyruvy 99.3 4.3E-13 1.5E-17 138.2 5.2 107 173-292 439-560 (578)
46 2c42_A Pyruvate-ferredoxin oxi 98.8 1.6E-08 5.5E-13 112.3 12.6 97 192-293 953-1071(1231)
47 2o1s_A 1-deoxy-D-xylulose-5-ph 91.2 0.95 3.2E-05 46.6 10.4 101 176-288 374-476 (621)
48 3mos_A Transketolase, TK; thia 91.1 1.3 4.6E-05 45.5 11.5 102 176-288 368-470 (616)
49 1itz_A Transketolase; calvin c 89.9 2.2 7.4E-05 44.4 11.9 110 169-288 419-531 (675)
50 2r8o_A Transketolase 1, TK 1; 89.7 2.1 7.1E-05 44.5 11.5 109 169-287 407-517 (669)
51 2pgn_A Cyclohexane-1,2-dione h 89.6 2.5 8.4E-05 43.0 11.9 104 177-290 57-164 (589)
52 3kom_A Transketolase; rossmann 88.7 3 0.0001 43.4 11.8 109 169-287 408-518 (663)
53 2o1x_A 1-deoxy-D-xylulose-5-ph 88.6 1.1 3.8E-05 46.2 8.4 101 176-289 377-479 (629)
54 1ybh_A Acetolactate synthase, 88.2 1.4 4.7E-05 44.8 8.8 103 177-290 64-171 (590)
55 3l84_A Transketolase; TKT, str 88.0 2.6 8.8E-05 43.6 10.7 109 169-288 387-497 (632)
56 2e6k_A Transketolase; structur 88.0 2.7 9.3E-05 43.5 10.9 110 169-288 402-513 (651)
57 3uk1_A Transketolase; structur 87.9 3 0.0001 43.8 11.2 108 169-287 453-562 (711)
58 1gpu_A Transketolase; transfer 87.6 2.5 8.4E-05 44.1 10.4 109 169-287 414-525 (680)
59 3eya_A Pyruvate dehydrogenase 87.5 1.6 5.6E-05 43.9 8.8 102 177-289 55-160 (549)
60 2uz1_A Benzaldehyde lyase; thi 87.0 2 6.9E-05 43.3 9.2 104 177-291 55-164 (563)
61 2iht_A Carboxyethylarginine sy 86.8 2.2 7.5E-05 43.1 9.3 104 177-290 62-170 (573)
62 4feg_A Pyruvate oxidase; carba 86.6 1.8 6E-05 44.2 8.5 102 177-289 64-169 (603)
63 1ozh_A ALS, acetolactate synth 86.6 1.8 6.1E-05 43.8 8.5 103 177-290 62-169 (566)
64 1t9b_A Acetolactate synthase, 86.4 1.8 6.2E-05 45.0 8.6 102 177-289 134-240 (677)
65 1yd7_A 2-keto acid:ferredoxin 85.5 1.6 5.4E-05 42.4 7.1 108 174-291 75-188 (395)
66 2ozl_B PDHE1-B, pyruvate dehyd 85.5 2.8 9.7E-05 39.8 8.8 99 175-289 74-184 (341)
67 2vbi_A Pyruvate decarboxylase; 85.4 3.8 0.00013 41.2 10.3 105 177-290 55-168 (566)
68 2wvg_A PDC, pyruvate decarboxy 84.9 4.2 0.00014 41.0 10.2 106 177-291 55-169 (568)
69 2q28_A Oxalyl-COA decarboxylas 84.0 2.2 7.5E-05 43.0 7.7 104 178-290 60-168 (564)
70 2c31_A Oxalyl-COA decarboxylas 83.8 2.3 7.9E-05 42.9 7.7 104 178-290 62-170 (568)
71 3rim_A Transketolase, TK; TPP, 83.6 5.9 0.0002 41.4 10.9 109 169-287 437-549 (700)
72 3m49_A Transketolase; alpha-be 83.5 6.8 0.00023 40.9 11.3 109 169-287 432-542 (690)
73 2x7j_A 2-succinyl-5-enolpyruvy 83.2 2.4 8.1E-05 43.2 7.6 106 177-291 83-198 (604)
74 2pan_A Glyoxylate carboligase; 82.5 4.6 0.00016 41.1 9.5 104 178-290 80-187 (616)
75 1v5e_A Pyruvate oxidase; oxido 82.3 3.1 0.0001 42.3 8.0 103 177-289 57-162 (590)
76 1r9j_A Transketolase; domains, 82.3 10 0.00036 39.3 12.1 110 169-288 407-518 (673)
77 1ik6_A Pyruvate dehydrogenase; 82.1 5.4 0.00019 38.3 9.3 98 176-288 111-219 (369)
78 1qs0_B 2-oxoisovalerate dehydr 81.9 4.2 0.00014 38.3 8.3 100 174-288 63-173 (338)
79 1q6z_A BFD, BFDC, benzoylforma 81.8 3.6 0.00012 41.0 8.2 105 177-291 52-161 (528)
80 2nxw_A Phenyl-3-pyruvate decar 81.7 3.9 0.00013 41.3 8.4 105 178-290 74-185 (565)
81 2bfd_B 2-oxoisovalerate dehydr 80.0 2.7 9.3E-05 39.9 6.3 99 175-288 79-189 (342)
82 1w85_B Pyruvate dehydrogenase 79.1 7 0.00024 36.6 8.8 98 174-287 61-170 (324)
83 3lq1_A 2-succinyl-5-enolpyruvy 78.9 7.9 0.00027 39.1 9.7 104 178-290 64-177 (578)
84 1umd_B E1-beta, 2-OXO acid deh 78.8 10 0.00035 35.4 9.8 97 175-287 63-171 (324)
85 2vk8_A Pyruvate decarboxylase 72.0 10 0.00036 37.9 8.4 105 177-290 56-169 (563)
86 2vbf_A Branched-chain alpha-ke 69.8 17 0.00057 36.5 9.3 104 177-290 77-189 (570)
87 2c42_A Pyruvate-ferredoxin oxi 66.7 24 0.00083 39.2 10.5 110 176-297 67-178 (1231)
88 3hww_A 2-succinyl-5-enolpyruvy 64.5 30 0.001 34.5 10.0 103 178-290 61-170 (556)
89 1ovm_A Indole-3-pyruvate decar 56.9 26 0.00089 34.8 7.9 49 176-231 56-104 (552)
90 2zzd_B Thiocyanate hydrolase s 49.0 14 0.00048 31.3 3.7 26 322-347 114-139 (157)
91 2jgd_A 2-oxoglutarate dehydrog 39.5 1.3E+02 0.0044 32.5 10.2 100 176-286 665-775 (933)
92 2wns_A Orotate phosphoribosylt 34.2 97 0.0033 26.6 7.0 26 321-346 171-196 (205)
93 3m3h_A OPRT, oprtase, orotate 34.2 1.2E+02 0.004 27.0 7.6 144 176-345 70-222 (234)
94 3dez_A OPRT, oprtase, orotate 30.3 2.7E+02 0.0094 24.7 9.5 145 176-345 82-234 (243)
95 3ibs_A Conserved hypothetical 30.3 57 0.002 27.4 4.7 37 192-228 111-147 (218)
96 2khz_A C-MYC-responsive protei 29.8 61 0.0021 27.0 4.7 35 193-230 79-113 (165)
97 2kl8_A OR15; structural genomi 29.4 64 0.0022 23.2 4.0 28 257-284 5-33 (85)
98 4hhu_A OR280; engineered prote 28.8 53 0.0018 26.5 3.9 32 252-283 82-114 (170)
99 1m3s_A Hypothetical protein YC 26.7 1.6E+02 0.0055 24.0 6.9 39 190-230 78-116 (186)
100 4hhu_A OR280; engineered prote 26.1 63 0.0022 26.1 3.8 31 253-283 2-33 (170)
101 2p1h_A APAF-1, apoptotic prote 26.0 38 0.0013 25.3 2.5 24 321-344 24-47 (94)
102 2yic_A 2-oxoglutarate decarbox 26.0 3E+02 0.01 29.3 10.3 103 176-287 597-708 (868)
103 3hyn_A Putative signal transdu 24.5 66 0.0022 28.0 3.9 37 192-229 80-118 (189)
104 2x5n_A SPRPN10, 26S proteasome 24.0 99 0.0034 26.3 5.1 34 193-226 108-141 (192)
105 3hbm_A UDP-sugar hydrolase; PS 23.8 2.2E+02 0.0076 25.7 7.8 34 196-230 3-38 (282)
106 3ehd_A Uncharacterized conserv 23.0 83 0.0029 26.4 4.3 37 193-231 71-108 (162)
107 2xt6_A 2-oxoglutarate decarbox 22.7 3.6E+02 0.012 29.5 10.3 104 176-287 842-953 (1113)
108 3hht_B NitrIle hydratase beta 22.3 78 0.0027 28.3 4.1 30 311-346 73-102 (229)
109 3etn_A Putative phosphosugar i 21.1 1.9E+02 0.0065 24.8 6.4 39 190-230 105-145 (220)
110 4fm4_B NitrIle hydratase beta 21.1 65 0.0022 28.3 3.3 25 311-341 69-93 (206)
111 1ugp_B NitrIle hydratase beta 21.0 88 0.003 27.9 4.2 30 311-346 69-98 (226)
112 2w84_A Peroxisomal membrane pr 20.7 1.1E+02 0.0037 22.3 3.8 28 318-346 32-59 (70)
113 1jeo_A MJ1247, hypothetical pr 20.3 1.5E+02 0.005 24.2 5.3 41 189-231 80-120 (180)
No 1
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=8.2e-78 Score=590.24 Aligned_cols=311 Identities=54% Similarity=0.945 Sum_probs=296.0
Q ss_pred CCcceecCCcccccccccC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHhcCC
Q 018967 34 TTPLTIETSVPFTSHQCEA-PSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT 112 (348)
Q Consensus 34 ~~~~~~~~~~~~~~~~~e~-~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~~l~ 112 (348)
.++.+|+.+ ||+.|+++. |+..+.+|+++++++|+.|+++|+||+++..+|++|+++||+|++.||||+++|+..+|+
T Consensus 6 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~e~l~~~yr~M~~~R~~e~~~~~l~~~g~i~gf~~~~~GqEa~~vg~~~al~ 84 (365)
T 2ozl_A 6 ANDATFEIK-KCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGIN 84 (365)
T ss_dssp CSEEEEECC-CCEEESCSCCSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSC
T ss_pred ccccccccC-ccccccCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHhhC
Confidence 345677776 999999986 677788999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEcCCcchHHHHhcCCCHHHHHHHHhCCCCCCCCCCCCCcCCCCCCCCccCCCccccchhHHHHHHHHHHHhCCCC
Q 018967 113 KKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDE 192 (348)
Q Consensus 113 ~~D~i~~~yR~~~~~l~~G~~~~~~~ael~g~~~g~~~G~ggs~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~ 192 (348)
++|+|+++||+|++++++|+++.++|+|++|+.+++++|++|+||++.+ ++++++|+||+++|+|+|+|+|.|+++++
T Consensus 85 ~~D~i~~~yR~~~~~~~~G~~~~~i~~e~~g~~~g~~~g~gg~~H~~~~--~~~~~~g~~G~~lp~A~G~A~A~~~~~~~ 162 (365)
T 2ozl_A 85 PTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGKD 162 (365)
T ss_dssp TTSEEECCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCTTCCCBT--TBCCCCCSTTTHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEehHHHHHHHHHhcCCCHHHHHHHHcCCCCCCCCCCCCCCCcCcc--ccCCCcchhhhhhHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999764 88999999999999999999999999999
Q ss_pred cEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchHHhhcCCcceEEEcCCCHHHHHHHHH
Q 018967 193 TVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACK 272 (348)
Q Consensus 193 ~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~~~~g~gipg~~VDG~D~~av~~a~~ 272 (348)
++|||++|||++++|.++|+||+|++|+||+||||+||+|+++++..+.+..++|+++++|+|+++|||+|+++|++|++
T Consensus 163 ~~vv~~~GDGa~~~G~~~Ealn~A~~~~lpvi~vv~NN~~g~~t~~~~~~~~~~~~~ra~g~p~~~VdG~D~~av~~a~~ 242 (365)
T 2ozl_A 163 EVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATR 242 (365)
T ss_dssp CCEEEEEETTGGGCHHHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGGTTTTSCEEEEETTCHHHHHHHHH
T ss_pred ceEEEEECchhhhccHHHHHHHHHHHHCcCEEEEEECCCcccCCCcccccCCCCHHHHhCCCCEEEEeCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877777778899899999999999999999999999
Q ss_pred HHHHHhcc-CCCEEEEEEEecCCCCCCCCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 018967 273 FAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKVFIQLVY 347 (348)
Q Consensus 273 ~A~~~ar~-~gP~lIe~~t~R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~~~~ 347 (348)
+|++++|+ +||+|||+.|||++|||++||+.+||+++|++.|++.+|||.+|+++|+++|++|++++++|+++++
T Consensus 243 ~A~~~~r~~~gP~lIe~~t~R~~gHs~~D~~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~ 318 (365)
T 2ozl_A 243 FAAAYCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVR 318 (365)
T ss_dssp HHHHHHHTTCCCEEEEEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEeecCCCCCCCCCCcccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 99999998 9999999999999999999998889999999999866899999999999999999999999999876
No 2
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=1.2e-70 Score=546.17 Aligned_cols=291 Identities=26% Similarity=0.387 Sum_probs=277.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHhcCCCCCEEEcCCcchHHHHhcCCCH
Q 018967 55 RSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTL 134 (348)
Q Consensus 55 ~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~~l~~~D~i~~~yR~~~~~l~~G~~~ 134 (348)
..+.+++++++++|+.|+++|.||+++..+|++|++ +|||++.||||+++|+..+|+++|+|+++||+|+++|++|+++
T Consensus 67 ~~~~~~~e~~~~~y~~M~~~R~fe~~~~~~~~qgr~-~~~~~~~GqEA~~vg~~~al~~~D~v~~~yR~~~~~l~~g~~~ 145 (407)
T 1qs0_A 67 WAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKM-SFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSL 145 (407)
T ss_dssp GGSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SCCCCCTTTHHHHHHHHHHSCTTSEEECCSSCHHHHHHTTCCH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-ccCcCCCChHHHHHHHHHhcCCCCEEEecccchHHHHhcCCCH
Confidence 346799999999999999999999999999999998 5999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcCCCCCCCCccCCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHH
Q 018967 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALN 214 (348)
Q Consensus 135 ~~~~ael~g~~~g~~~G~ggs~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn 214 (348)
.++|+|++|+..+.++|+++++|++.++.+|++++|+||+++|+|+|+|+|.|++++++++||++|||++++|.++|+||
T Consensus 146 ~~i~~el~g~~~~~~~G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~vv~i~GDGa~~~G~~~Eal~ 225 (407)
T 1qs0_A 146 VEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALT 225 (407)
T ss_dssp HHHHHHHHTCTTCTTTTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCCceeecchhccCccccccccccchhHHHHHHHHHHHhCCCCEEEEEECCchhhcChHHHHHH
Confidence 99999999999998999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCeEEEEecCCccccccccccc-CCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018967 215 IAALWDLPAILVCENNHYGMGTAEWRAA-KSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (348)
Q Consensus 215 ~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~-~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (348)
+|++|+||+||||+||+|+++++..+.+ ..++|+++ +||+|+++|||+|+++|++|+++|++++|+ +||+|||+.|
T Consensus 226 ~A~~~~lpvi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~gP~lIe~~t 305 (407)
T 1qs0_A 226 FAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVT 305 (407)
T ss_dssp HHHHHTCCEEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEEC
T ss_pred HHHHHCcCEEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 9999999999999999999999877665 46788775 599999999999999999999999999998 9999999999
Q ss_pred ecCCCCCCCCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 018967 291 YRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKVFIQLVY 347 (348)
Q Consensus 291 ~R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~~~~ 347 (348)
||++|||++|+++.||+++|++.|+ ++|||.+|+++|+++|++|++++++|+++++
T Consensus 306 ~R~~Ghs~~Dd~~~Yr~~~e~~~~~-~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~~ 361 (407)
T 1qs0_A 306 YRAGPHSTSDDPSKYRPADDWSHFP-LGDPIARLKQHLIKIGHWSEEEHQATTAEFE 361 (407)
T ss_dssp CCCSCSSTTCCGGGTSCTTHHHHCT-TCCHHHHHHHHHHHTTSCCHHHHHHHHHHHH
T ss_pred eccCCcCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998 5999999999999999999999999999876
No 3
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=2e-68 Score=524.44 Aligned_cols=282 Identities=29% Similarity=0.454 Sum_probs=261.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHhcCCCCCEEEcCCcchHHHHhcCCCH
Q 018967 55 RSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTL 134 (348)
Q Consensus 55 ~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~~l~~~D~i~~~yR~~~~~l~~G~~~ 134 (348)
..+.+|+++++++|+.|+++|.||+++.+++++|++ ||||++.||||+++|+..+|+++|+++++||+|++++++|.++
T Consensus 37 ~~~~l~~e~l~~~y~~M~~~R~fe~~~~~~~~qgr~-g~~~~~~G~Ea~~vg~~~~l~~~D~v~~~~R~~~~~~~~G~~~ 115 (368)
T 1w85_A 37 AMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRL-GFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPL 115 (368)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CSCCCCTTCHHHHHHHHHTCCTTCEEECCSSCHHHHHHTTCCH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCCHHHHHHHHHHhcCCcCEEEecchhHHHHHhcCCCH
Confidence 346799999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcCCCCCCCCccCCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHH
Q 018967 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALN 214 (348)
Q Consensus 135 ~~~~ael~g~~~g~~~G~ggs~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn 214 (348)
..+|+|++|+.+ |++|| ++.++.+++|++|+++|+|+|+|+|.|+.+++++|||++|||++++|.++|+||
T Consensus 116 ~~~~~el~G~~~------G~~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~~~~~~vv~i~GDGa~~~G~~~Eal~ 186 (368)
T 1w85_A 116 YQAFLFSRGHFH------GNQIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGIN 186 (368)
T ss_dssp HHHHHHHHTCGG------GGCCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHTTCSCCEEEEEETGGGGSHHHHHHHH
T ss_pred HHHHHHHCCCCC------CCCCC---cccccCCCccccCccccHHHHHHHHhHhhCCCCeEEEEEchhhhhhcHHHHHHH
Confidence 999999999875 35677 567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCeEEEEecCCcccccccccccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEe
Q 018967 215 IAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (348)
Q Consensus 215 ~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~ 291 (348)
+|++|+||+||||+||+|+++++.......+++.++ +||+|+++|||+|+++|++|+++|++++|+ +||+|||+.||
T Consensus 187 ~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~ 266 (368)
T 1w85_A 187 FAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCF 266 (368)
T ss_dssp HHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECC
T ss_pred HHHHHCcCEEEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEee
Confidence 999999999999999999999887776666788875 499999999999999999999999999998 89999999999
Q ss_pred cCCCCC-CCCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 018967 292 RYHGHS-MSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKVFIQLVY 347 (348)
Q Consensus 292 R~~GHs-~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~~~~ 347 (348)
|++||| ++|+++.||+++|++.|+ ++|||.+|+++|+++|++|++++++|+++++
T Consensus 267 r~~gHs~~~Ddp~~yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~ 322 (368)
T 1w85_A 267 RYGPHTMSGDDPTRYRSKELENEWA-KKDPLVRFRKFLEAKGLWSEEEENNVIEQAK 322 (368)
T ss_dssp CSSCSCSSCC------CHHHHHHHH-TTCHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 999999 999999999999999998 4999999999999999999999999999876
No 4
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=1.3e-68 Score=531.01 Aligned_cols=292 Identities=25% Similarity=0.388 Sum_probs=258.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHhcCCCCCEEEcCCcchHHHHhcCCCH
Q 018967 55 RSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTL 134 (348)
Q Consensus 55 ~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~~l~~~D~i~~~yR~~~~~l~~G~~~ 134 (348)
..+.+++++++++|+.|+++|.||+++.++|++|+++ |+|++.||||+++|+..+|+++|+|+++||+|++++++|+++
T Consensus 48 ~~~~~~~e~~~~~y~~M~~~r~fe~~~~~~~~~gri~-~~~~~~GqEa~~vg~~~al~~~D~v~~~yR~~~~~~~~G~~~ 126 (400)
T 2bfd_A 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRIS-FYMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPL 126 (400)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSS-CCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-eeecCCChHHHHHHHHHhcCCCCEEEecCcCHHHHHHcCCCH
Confidence 3578999999999999999999999999999999985 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcCCCCCCCCccCCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHH
Q 018967 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALN 214 (348)
Q Consensus 135 ~~~~ael~g~~~g~~~G~ggs~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn 214 (348)
.++|++++|+.+++++|+++++|++.++.++++++|+||+++|+|+|+|+|.++.+++++|||++|||++++|.+||+||
T Consensus 127 ~~~l~e~~g~~~g~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~AvG~AlA~~~~~~~~~vv~~~GDGa~~~G~~~Eal~ 206 (400)
T 2bfd_A 127 ELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFN 206 (400)
T ss_dssp HHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCCcCCcccccCccccCccccccccHHHHHHHhhhhhCCCCeEEEEECchhhhcChHHHHHH
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCeEEEEecCCcccccccccccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEe
Q 018967 215 IAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (348)
Q Consensus 215 ~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~ 291 (348)
+|+.|+||+||||+||+|+++++.......+++.++ +||+++++|||+|+++|++|+++|++++|+ ++|+|||++||
T Consensus 207 ~A~~~~lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~ty 286 (400)
T 2bfd_A 207 FAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 (400)
T ss_dssp HHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HHHHHCcCEEEEEECCceeeeecccccCCCCCHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEee
Confidence 999999999999999999999987777666788775 599999999999999999999999999998 99999999999
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 018967 292 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKVFIQLVY 347 (348)
Q Consensus 292 R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~~~~ 347 (348)
|++|||++|+++.||+++|++.|++..|||.+|+++|++.|++|++++++|+++++
T Consensus 287 R~~gHs~~D~~~~Yr~~~e~~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~ 342 (400)
T 2bfd_A 287 RIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSR 342 (400)
T ss_dssp CCC--CC-------------------CCHHHHHHHHHTTTTCCCHHHHHHHHHHHH
T ss_pred eeCCCCCCCCCccCCCHHHHHHHHhcCCHHHHHHHHHHHCCCCChHHHHHHHHHHH
Confidence 99999999998899999999999865689999999999999999999998887765
No 5
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=2.6e-64 Score=495.33 Aligned_cols=290 Identities=28% Similarity=0.441 Sum_probs=276.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHhcCCCC-CEEEcCCcchHHHHhcCCCH
Q 018967 56 SVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKK-DSIITAYRDHCTFLGRGGTL 134 (348)
Q Consensus 56 ~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~~l~~~-D~i~~~yR~~~~~l~~G~~~ 134 (348)
.+.+|+++++++|+.|+++|.||+++..++++|++ ||++++.|||++++|+..+|+++ |+++++||+|++.+.+|+++
T Consensus 30 ~~~l~~~~l~~l~~~m~~~R~~~~~~~~~~~~G~~-g~~~~~~G~ea~~~~~~~~l~~~rD~i~~s~r~~~~~~~~G~~~ 108 (367)
T 1umd_A 30 PLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPL 108 (367)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-SCCCCCTTCHHHHHHHHHHSCTTTSEEECCTTTHHHHHHHTCCH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-cCCCCCcCHHHHHHHHHHHcCCCCcEEEeCcHHHHHHHHcCCCH
Confidence 46799999999999999999999999999999998 89999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcCCCCCCCCccCCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHH
Q 018967 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALN 214 (348)
Q Consensus 135 ~~~~ael~g~~~g~~~G~ggs~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn 214 (348)
.++|++++|+.++++.|+++++|++.++.++++++|++|+++|+|+|+|+|.|+.+++++|||++|||++++|.++|+||
T Consensus 109 ~~~l~~~~g~~~g~~~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~~~~~~vv~i~GDGa~~~G~~~Eal~ 188 (367)
T 1umd_A 109 KELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGIN 188 (367)
T ss_dssp HHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHhCCCCeEEEEEcccccccCcHHHHHH
Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCeEEEEecCCcccccccccccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEe
Q 018967 215 IAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (348)
Q Consensus 215 ~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~ 291 (348)
+|+.|++|+||||+||+|+++++.......+++.++ ++|+|+++|||+|+.+|++|+++|++++++ +||+|||+.||
T Consensus 189 ~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~A~~~a~~~~gP~lIe~~t~ 268 (367)
T 1umd_A 189 FAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVY 268 (367)
T ss_dssp HHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECC
T ss_pred HHHHhCcCEEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEee
Confidence 999999999999999999999887666666777775 599999999999999999999999999988 89999999999
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 018967 292 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKVFIQLVY 347 (348)
Q Consensus 292 R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~~~~ 347 (348)
|.+||+++|+++.||+++|++.|+ ++|||.+|+++|+++|++|++++++|+++++
T Consensus 269 r~~Ghs~~D~~~~Yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~ 323 (367)
T 1umd_A 269 RYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIR 323 (367)
T ss_dssp CCSCSSTTCCGGGTSCHHHHHHHH-TTCHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCccccCCHHHHHHHH-cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999998 4999999999999999999999999999876
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=1.8e-60 Score=509.27 Aligned_cols=308 Identities=20% Similarity=0.202 Sum_probs=263.7
Q ss_pred CCCcceecCC-------cccccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHH
Q 018967 33 DTTPLTIETS-------VPFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAI 105 (348)
Q Consensus 33 ~~~~~~~~~~-------~~~~~~~~e~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~v 105 (348)
.+.++.+|+- .+|..+++|.+. +.+|+++++++|+.|+++|.||+++..+|+++|+.|+ .||||+++
T Consensus 84 yc~~ig~e~~~i~~~~~~~w~~~~~e~~~--~~~s~e~~~~~y~~m~~~R~fE~~l~~~~~~~k~~g~----~G~Ea~~~ 157 (868)
T 2yic_A 84 YCRHVGVEYTHILEPEQQRWIQERVETKH--DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSL----EGAETVIP 157 (868)
T ss_dssp HSSSEEEECTTCSCHHHHHHHHHHHSSCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHH
T ss_pred hcCCCCcceeccCChHHhHHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC----CChHHHHH
Confidence 4666777631 149999999754 7899999999999999999999999999999887664 99999999
Q ss_pred HHHhc------CCCCCEEEc-CCcchHHHHh--cCCCHHHHHHHHhCCCCCC-CC-CCCCCcCCCCCC------------
Q 018967 106 GMEAG------ITKKDSIIT-AYRDHCTFLG--RGGTLLEVFSELMGRKDGC-SH-GKGGSMHFYKKD------------ 162 (348)
Q Consensus 106 g~~~~------l~~~D~i~~-~yR~~~~~l~--~G~~~~~~~ael~g~~~g~-~~-G~ggs~h~~~~~------------ 162 (348)
|+..+ ++++|++++ +||||+++|+ +|+++.++|+|++|+.+++ ++ |++.++|++...
T Consensus 158 g~~~~l~~~~~l~~~D~v~gm~hRg~~~~Lan~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~ 237 (868)
T 2yic_A 158 MMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIE 237 (868)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHTTTCC------------CGGGTCCEEEEEECSSSSCEEE
T ss_pred HHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCccee
Confidence 99866 558999998 8999999999 9999999999999998876 43 444478987532
Q ss_pred CCccCCCccccchhHHHHHHHHHHHhCC----------CCcEEEEEeCCccc-cchhHHHHHHHHHHCCCC---eEEEEe
Q 018967 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAA-NQGQLFEALNIAALWDLP---AILVCE 228 (348)
Q Consensus 163 ~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~~~GDGa~-~~G~~~Ealn~Aa~~~LP---vI~Vv~ 228 (348)
.++.+++|+||+++|+|+|+|+|.|+++ .+.++||++|||++ +||.+||+||+|++|+|| +||||+
T Consensus 238 l~l~~n~s~Lg~~~P~A~G~A~A~k~~~~~~~~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~ 317 (868)
T 2yic_A 238 VSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVV 317 (868)
T ss_dssp EEECCCCSSTTTTHHHHHHHHHHHHHHHTCSTTSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEE
T ss_pred eeecCCCccccccccHHHHHHHHHHhhccCCcccccccCCceEEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEE
Confidence 2456678999999999999999999864 66899999999995 999999999999999999 999999
Q ss_pred cCCcccccccccccCCchHHh--hcCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCCCCCCCCCCCCC
Q 018967 229 NNHYGMGTAEWRAAKSPSYYK--RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTY 305 (348)
Q Consensus 229 NN~~~i~~~~~~~~~~~~~~~--~g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~GHs~~D~~~~Y 305 (348)
||+|+++++.......+++.+ .+||+|+++|||+|+++|++|+++|++++|+ ++|+|||+.|||++|||++|+++ |
T Consensus 318 NN~~g~st~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p~-~ 396 (868)
T 2yic_A 318 NNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-M 396 (868)
T ss_dssp ECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-G
T ss_pred cCCcccccCccccccccCHHHHHHhCCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCcCcccccc-c
Confidence 999999997543333344444 3599999999999999999999999999998 99999999999999999999985 7
Q ss_pred CCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 018967 306 RTRDEISGVRQERDPIERIRKLILAHDLATEKELKVFIQLVY 347 (348)
Q Consensus 306 R~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~~~~ 347 (348)
|+++|++.|++++||+.+|+++|+++|++|++|+++|+++++
T Consensus 397 ~~p~~~~~~~~~~dPi~~~~~~L~~~G~~t~ee~~~i~~e~~ 438 (868)
T 2yic_A 397 TQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQ 438 (868)
T ss_dssp TCHHHHHHHTTCCCHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHhCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 788889999878999999999999999999999999999875
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=3.1e-59 Score=510.42 Aligned_cols=308 Identities=20% Similarity=0.202 Sum_probs=262.8
Q ss_pred CCCcceecCC-------cccccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHH
Q 018967 33 DTTPLTIETS-------VPFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAI 105 (348)
Q Consensus 33 ~~~~~~~~~~-------~~~~~~~~e~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~v 105 (348)
.|.++.+|+- .+|..+++|.+. +.+|+++++++|+.|+++|.||+++..+|++||+.|+ .||||+++
T Consensus 329 yc~~ig~e~~~i~~~~~~~w~~~~~e~~~--~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~~k~~g~----~GqEa~~~ 402 (1113)
T 2xt6_A 329 YCRHVGVEYTHILEPEQQRWIQERVETKH--DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSL----EGAETVIP 402 (1113)
T ss_dssp HSSSEEEECTTCSCHHHHHHHHHHHHSCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHH
T ss_pred ccCCCCcceeccCCHHHhHHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC----CChHHHHH
Confidence 4666777732 149999999754 7899999999999999999999999999999888774 99999999
Q ss_pred HHHhc------CCCCCEEEc-CCcchHHHHh--cCCCHHHHHHHHhCCCCCC-CC-CCCCCcCCCCCC------------
Q 018967 106 GMEAG------ITKKDSIIT-AYRDHCTFLG--RGGTLLEVFSELMGRKDGC-SH-GKGGSMHFYKKD------------ 162 (348)
Q Consensus 106 g~~~~------l~~~D~i~~-~yR~~~~~l~--~G~~~~~~~ael~g~~~g~-~~-G~ggs~h~~~~~------------ 162 (348)
|+..+ ++++|++++ +||||+++|+ +|+++.++|+|++|+.+++ ++ |++.++|++...
T Consensus 403 g~~~~l~~~~~l~~~D~v~gm~hRg~~~~La~~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~ 482 (1113)
T 2xt6_A 403 MMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIE 482 (1113)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHSTTC-------------CGGGTCCEEEEEECSSSSCEEE
T ss_pred HHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCccee
Confidence 98777 558999998 8999999999 9999999999999998876 43 444478987532
Q ss_pred CCccCCCccccchhHHHHHHHHHHHhCC----------CCcEEEEEeCCccc-cchhHHHHHHHHHHCCCC---eEEEEe
Q 018967 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAA-NQGQLFEALNIAALWDLP---AILVCE 228 (348)
Q Consensus 163 ~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~~~GDGa~-~~G~~~Ealn~Aa~~~LP---vI~Vv~ 228 (348)
.++.+++|+||+++|+|+|+|+|.|+.+ .+.+++|++|||++ +||.+||+||+|++|+|| +||||+
T Consensus 483 l~l~~n~s~Lg~~~p~A~G~A~A~k~~~~~~~~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~ 562 (1113)
T 2xt6_A 483 VSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVV 562 (1113)
T ss_dssp EEECCCCSSTTTTHHHHHHHHHHHHHHTTBSTTSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEE
T ss_pred eeecCCCccccccccHHHHHHHHHHHhccccCccccccCCcEEEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEE
Confidence 2456678999999999999999999865 57899999999995 999999999999999999 999999
Q ss_pred cCCcccccccccccCCchHHh--hcCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCCCCCCCCCCCCC
Q 018967 229 NNHYGMGTAEWRAAKSPSYYK--RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTY 305 (348)
Q Consensus 229 NN~~~i~~~~~~~~~~~~~~~--~g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~GHs~~D~~~~Y 305 (348)
||+|+|+++.......+++.+ .+||+|+++|||+|+++|++|+++|++++|+ ++|+|||+.|||++|||++|+++ |
T Consensus 563 NN~~gist~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p~-~ 641 (1113)
T 2xt6_A 563 NNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-M 641 (1113)
T ss_dssp ECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-G
T ss_pred eCCcccccCccccccccCHHHHHHhcCCcEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeEccCCcCCCCccc-c
Confidence 999999997543333333333 3699999999999999999999999999998 99999999999999999999985 7
Q ss_pred CCHHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 018967 306 RTRDEISGVRQERDPIERIRKLILAHDLATEKELKVFIQLVY 347 (348)
Q Consensus 306 R~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~~~~ 347 (348)
|.++|++.|++++||+.+|+++|+++|++|++|+++|+++++
T Consensus 642 ~~~~~~~~~~~~~dpi~~~~~~L~~~G~~t~ee~~~i~~e~~ 683 (1113)
T 2xt6_A 642 TQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQ 683 (1113)
T ss_dssp TCHHHHHHHTTCCCHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 778888899878999999999999999999999999999876
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=7.2e-58 Score=491.81 Aligned_cols=296 Identities=17% Similarity=0.201 Sum_probs=242.8
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHhcCC------CCCEEE
Q 018967 45 FTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT------KKDSII 118 (348)
Q Consensus 45 ~~~~~~e~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~~l~------~~D~i~ 118 (348)
|...++|.+ .+.+|+|+++++|+.|+++|.||+++..+|++||..| +.|||++++|+..+++ ++|+|+
T Consensus 183 w~~~~~e~~--~~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~gkrf~----~~G~Ea~i~g~~~~~~~a~~~g~~D~v~ 256 (933)
T 2jgd_A 183 WIQQRIESG--RATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFS----LEGGDALIPMLKEMIRHAGNSGTREVVL 256 (933)
T ss_dssp HHHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCC----CTTCTTHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc----CCCchHHHHHHHHHHHHHhhCCCCCEEe
Confidence 888888864 5789999999999999999999999999999988533 5899999999766654 799999
Q ss_pred c-CCcchHHHHh--cCCCHHHHHHHHhCCCCCCCCCCCCCcCCCCCCC----------CccCCCccccchhHHHHHHHHH
Q 018967 119 T-AYRDHCTFLG--RGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDS----------GFYGGHGIVGAQIPLGCGLAFA 185 (348)
Q Consensus 119 ~-~yR~~~~~l~--~G~~~~~~~ael~g~~~g~~~G~ggs~h~~~~~~----------~~~~~~g~lG~~lp~A~G~A~A 185 (348)
+ +||||+++|+ +|+++.++|+|++|+.++.+.|++.++|++.... ++.+++|++|+++|+|+|+|+|
T Consensus 257 g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~~~~shlg~~~p~A~G~A~A 336 (933)
T 2jgd_A 257 GMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRA 336 (933)
T ss_dssp ECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEECCCCSSTTCHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCcccccccCCCceEEeecccCcccccccCHHHHHHHH
Confidence 7 8999999999 9999999999999999887767777889886432 2357789999999999999999
Q ss_pred HHhCC-----CCcEEEEEeCCccc-cchhHHHHHHHHHHCCCC---eEEEEecCCccccc-ccccccCCchHHhh--cCC
Q 018967 186 QKYSK-----DETVTFALYGDGAA-NQGQLFEALNIAALWDLP---AILVCENNHYGMGT-AEWRAAKSPSYYKR--GDY 253 (348)
Q Consensus 186 ~k~~~-----~~~~vv~~~GDGa~-~~G~~~Ealn~Aa~~~LP---vI~Vv~NN~~~i~~-~~~~~~~~~~~~~~--g~g 253 (348)
.|+++ .+.++||++|||++ ++|.+||+||+|+.|++| +||||+||+|+|++ +...+...+++.++ ++|
T Consensus 337 ~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~~~~~~a~a~g 416 (933)
T 2jgd_A 337 RLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQ 416 (933)
T ss_dssp HHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC---------------CGGGGGGTTT
T ss_pred HHhhccccCCCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhcccchhHHHHHHHcC
Confidence 99884 67899999999998 999999999999999999 99999999999999 77755544555554 599
Q ss_pred cceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCCCCCCCCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHHcC
Q 018967 254 VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHD 332 (348)
Q Consensus 254 ipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g 332 (348)
+|+++|||+|+++|++++++|++++|+ ++|+|||+.|||++||+++|+++ ||+++|++.|++.+||+.+|+++|+++|
T Consensus 417 ~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~~-yr~~~e~~~~~~~~dPi~~~~~~Li~~G 495 (933)
T 2jgd_A 417 APIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPS-ATQPLMYQKIKKHPTPRKIYADKLEQEK 495 (933)
T ss_dssp CCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC------------CCTTHHHHHTSCCHHHHHHHHHHTTT
T ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccchh-hCCHHHHHHHHccCCHHHHHHHHHHHcC
Confidence 999999999999999999999999998 99999999999999999999975 9999999999966899999999999999
Q ss_pred CCCHHHHHHHHHHHH
Q 018967 333 LATEKELKVFIQLVY 347 (348)
Q Consensus 333 ~~t~~el~~i~~~~~ 347 (348)
++|++++++++++++
T Consensus 496 v~t~~~~~~i~~~~~ 510 (933)
T 2jgd_A 496 VATLEDATEMVNLYR 510 (933)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999999876
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.98 E-value=4e-32 Score=282.98 Aligned_cols=233 Identities=18% Similarity=0.154 Sum_probs=175.6
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHhcCC-CCCEEE--cCCc
Q 018967 46 TSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT-KKDSII--TAYR 122 (348)
Q Consensus 46 ~~~~~e~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~~l~-~~D~i~--~~yR 122 (348)
...+++.|.+...++.++|.++++.| |.+...+. ++..|+++++.|+|++.+++...++ ++|+++ ..||
T Consensus 10 ~l~~i~~p~d~~~l~~~~l~~l~~~i---R~~~~~~~-----~~~~Gh~~~~lg~~~~~~~l~~~~~~~~D~~v~~~gH~ 81 (621)
T 2o1s_A 10 TLALVDSTQELRLLPKESLPKLCDEL---RRYLLDSV-----SRSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQ 81 (621)
T ss_dssp TGGGCSSHHHHTTSCGGGHHHHHHHH---HHHHHHHS-----CGGGCTHHHHHTTHHHHHHHHHHSCTTTSEEEESSSTT
T ss_pred hhhhcCChHHhhhCCHHHHHHHHHHH---HHHHHHHH-----hhcCCCcCCChhHHHHHHHHHhccCCCCCEEEEeCchH
Confidence 35677778888899999999999887 66554332 2357999999999999999999999 899988 6899
Q ss_pred chHHHHhcCCCHHHHHHHHhCCCCCCCCCCCCCcCCCCC-C-CCccCCCccccchhHHHHHHHHHHHhCCCCcEEEEEeC
Q 018967 123 DHCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKK-D-SGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYG 200 (348)
Q Consensus 123 ~~~~~l~~G~~~~~~~ael~g~~~g~~~G~ggs~h~~~~-~-~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~G 200 (348)
++++.+.+|. .+ ++.. .+..+|.+++..+ + .+...++|++|+++|+|+|+|+|.|+++++++|||++|
T Consensus 82 ~y~~~~l~G~-~~----~~~~-----~r~~~g~~g~~~~~~s~~~~~~~G~~G~gl~~A~G~AlA~~~~~~~~~Vv~v~G 151 (621)
T 2o1s_A 82 AYPHKILTGR-RD----KIGT-----IRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIG 151 (621)
T ss_dssp CHHHHHTTTT-GG----GGGG-----TTSTTSCCSSCCTTTCTTCCSCCSSSSCHHHHHHHHHHHHHHHTSCCCEEEEEE
T ss_pred HHHHHHHhCC-Hh----hhhc-----ccccCCCCCCCCCCCCCCCccCCcccchHHHHHHHHHHHHHHhCCCCeEEEEEc
Confidence 9999998887 11 1210 1111222222221 0 12334699999999999999999999999999999999
Q ss_pred CccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCC----------------------------------ch
Q 018967 201 DGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKS----------------------------------PS 246 (348)
Q Consensus 201 DGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~----------------------------------~~ 246 (348)
||++++|.++|+||+|+.|++|+||||+||+|+++++...+... .+
T Consensus 152 DG~~~~G~~~EaL~~A~~~~~pli~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~~~~~~r~~~ 231 (621)
T 2o1s_A 152 DGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEE 231 (621)
T ss_dssp TTGGGSHHHHHHHHHHHHHCCSEEEEEEECC-------------------------------------------------
T ss_pred hhhhhccHHHHHHHHHHhhCCCEEEEEeCCCcccCCCcchHHHHHHhhhcchhHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 99999999999999999999999999999999988765431100 01
Q ss_pred H-------Hh--hcCCcceE-EEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCC
Q 018967 247 Y-------YK--RGDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMS 299 (348)
Q Consensus 247 ~-------~~--~g~gipg~-~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~ 299 (348)
+ .+ .++|++++ +|||+|+.++.+++++|++. ++|+|||+.|+|++||+..
T Consensus 232 ~~~~~~~p~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~~---~gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 232 HIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDL---KGPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp -------CHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHS---CSEEEEEEECCCTTCCCCC
T ss_pred HhhhccChhhHHHHCCCeEeeeeCCCCHHHHHHHHHHHHHc---CCCEEEEEEEecccCCChh
Confidence 1 12 35888888 99999999999999998763 8999999999999999854
No 10
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.97 E-value=3.1e-31 Score=276.61 Aligned_cols=230 Identities=17% Similarity=0.127 Sum_probs=177.6
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHhcCC-CCCEEEcCCcchH
Q 018967 47 SHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT-KKDSIITAYRDHC 125 (348)
Q Consensus 47 ~~~~e~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~~l~-~~D~i~~~yR~~~ 125 (348)
...|+.|.+...++.++|.++|+.| |.+... .+. +..|+++++.|+-.+.+++...++ ++|+++.. |||+
T Consensus 13 l~~i~~p~d~~~l~~~~l~~l~~~i---R~~~~~---~~~--~~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~-~GH~ 83 (629)
T 2o1x_A 13 LDQIHGPKDLKRLSREQLPALTEEL---RGEIVR---VCS--RGGLHLASSLGAVDIITALHYVLDSPRDRILFD-VGHQ 83 (629)
T ss_dssp GGGCSSHHHHTTSCGGGHHHHHHHH---HHHHHH---HHT--TSSSCHHHHHHTHHHHHHHHHHSCTTTSEEEES-SSTT
T ss_pred hhhCCChhhhhhCCHHHHHHHHHHH---HHHHHH---HHH--hcCCcCCCchhHHHHHHHHHhhcCCCCCeEEec-CchH
Confidence 4667777788889999999999988 654432 232 257999999999777777766678 89999988 8986
Q ss_pred ---HHHhcCC-CHHHHHHHHhCCCCCCCCCCCCCcCCCCCCCCccCCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCC
Q 018967 126 ---TFLGRGG-TLLEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGD 201 (348)
Q Consensus 126 ---~~l~~G~-~~~~~~ael~g~~~g~~~G~ggs~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GD 201 (348)
+.+..|. +....+.++.|. +|+..++. ++ ++..++|++|+++|+|+|+|+|.|+++++++|||++||
T Consensus 84 ~y~~~~l~G~~~~~~~~r~~~g~-~G~p~~~~-s~-------~~~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v~GD 154 (629)
T 2o1x_A 84 AYAHKILTGRRDQMADIKKEGGI-SGFTKVSE-SE-------HDAITVGHASTSLTNALGMALARDAQGKDFHVAAVIGD 154 (629)
T ss_dssp CHHHHHTTTTGGGGGGTTSTTSC-CSSCCGGG-CT-------TCCSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEEEET
T ss_pred HHHHHHHhCcHhHHhCcccCCCC-CCCCCCCC-CC-------CCCcCCCcccccHhHHHHHHHHHHHhCCCCeEEEEEch
Confidence 5666665 222234444442 23333221 22 34567899999999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccC--------------------------C---------ch
Q 018967 202 GAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAK--------------------------S---------PS 246 (348)
Q Consensus 202 Ga~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~--------------------------~---------~~ 246 (348)
|++++|.++|+||+|+.|++|+||||+||+|+++++...+.. . ++
T Consensus 155 G~~~~G~~~EaL~~A~~~~~pli~IvnnN~~~i~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d 234 (629)
T 2o1x_A 155 GSLTGGMALAALNTIGDMGRKMLIVLNDNEMSISENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKN 234 (629)
T ss_dssp TGGGSHHHHHHHHHHHHHCCSEEEEEEECSBSSSBCCSSHHHHC------------------------------------
T ss_pred hhhhccHHHHHHHHHHhhCCCEEEEEECCCCCCCCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 999999999999999999999999999999998775532100 0 03
Q ss_pred HH---------h--hcCCcceE-EEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCC
Q 018967 247 YY---------K--RGDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHS 297 (348)
Q Consensus 247 ~~---------~--~g~gipg~-~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs 297 (348)
+. + .++|++++ +|||+|+.++.+++++|++ .++|+|||+.|++++||+
T Consensus 235 ~~~~~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~---~~~P~lI~v~t~kg~G~~ 294 (629)
T 2o1x_A 235 STRHFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVD---LDGPTILHIVTTKGKGLS 294 (629)
T ss_dssp ---------CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTT---SSSEEEEEEECCTTTTCH
T ss_pred HHHhhcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHh---cCCCEEEEEEEecCCCCC
Confidence 21 3 35899999 9999999999999988764 289999999999999997
No 11
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.95 E-value=1e-26 Score=244.47 Aligned_cols=236 Identities=18% Similarity=0.169 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHh--cCCC-------CCEE-Ec-CCcc---hHHHHhcCC--CH
Q 018967 71 MATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEA--GITK-------KDSI-IT-AYRD---HCTFLGRGG--TL 134 (348)
Q Consensus 71 M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~--~l~~-------~D~i-~~-~yR~---~~~~l~~G~--~~ 134 (348)
...+|.+-..+...... |+.-++.|.--+.+++.. .+++ .|.+ ++ .|-+ +.+.+..|. +.
T Consensus 12 a~~iR~~~~~~v~~a~~----GH~g~~l~~~~i~~~L~~~~~~~~~~p~~~~rDr~v~s~GH~~~~lYa~~~l~G~~~~~ 87 (680)
T 1gpu_A 12 VSTIRILAVDTVSKANS----GHPGAPLGMAPAAHVLWSQMRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGYDLSI 87 (680)
T ss_dssp HHHHHHHHHHHHHHHTC----SCCHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHTTCSCCH
T ss_pred HHHHHHHHHHHHHHcCC----CccCCchhHHHHHHHHHHhCCCCccCCCCCCCCEEEEecchHHHHHHHHHHHhCCCCCH
Confidence 34566655444332222 332335566556665554 3443 5765 44 4655 444444555 34
Q ss_pred HHHHHHHhCCCCCCCCCCCCCcCCCCCCCCccCCCccccchhHHHHHHHHHHHhCC----------CCcEEEEEeCCccc
Q 018967 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAA 204 (348)
Q Consensus 135 ~~~~ael~g~~~g~~~G~ggs~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~~~GDGa~ 204 (348)
+++. . +.+.. |+ -+.|......++...+|++|+++|.|+|+|+|.++.+ .+++|||++|||++
T Consensus 88 ~~l~-~-~r~~g----~~-~~ghp~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~ 160 (680)
T 1gpu_A 88 EDLK-Q-FRQLG----SR-TPGHPEFELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCL 160 (680)
T ss_dssp HHHT-T-TTCTT----CS-CCSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHH
T ss_pred HHHH-h-hcccC----CC-CCCCCCccCCCeeeccccccchHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCcc
Confidence 4321 1 11111 11 1234443345788899999999999999999998754 37899999999999
Q ss_pred cchhHHHHHHHHHHCCCC-eEEEEecCCcccccccccccCCchHHhh--cCCcceE-EEcCC-CHHHHHHHHHHHHHHhc
Q 018967 205 NQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGL-KVDGM-DALAVKQACKFAKEHAL 279 (348)
Q Consensus 205 ~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~~~i~~~~~~~~~~~~~~~~--g~gipg~-~VDG~-D~~av~~a~~~A~~~ar 279 (348)
++|.+||++|+|+.|+|| +|+||+||+|+++++..... .+++.++ +||++++ +|||| |+.++.+|+++|++ .
T Consensus 161 ~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~A~~--~ 237 (680)
T 1gpu_A 161 QEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATSISF-DEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKL--S 237 (680)
T ss_dssp HSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHH--C
T ss_pred chhhHHHHHHHHHHhCCCcEEEEEECCCceEeccccccc-CccHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH--C
Confidence 999999999999999999 88999999999988766543 4577764 5899999 99999 99999999999986 1
Q ss_pred cCCCEEEEEEEecCCCCCCCCCC---CCCCCHHHHHHHHhcCCHH
Q 018967 280 KNGPMILEMDTYRYHGHSMSDPG---STYRTRDEISGVRQERDPI 321 (348)
Q Consensus 280 ~~gP~lIe~~t~R~~GHs~~D~~---~~YR~~~e~~~~~~~~DPi 321 (348)
.++|+||+++|+|++||++.|+. ..||+++|+++|++ ++++
T Consensus 238 ~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~~-~~~~ 281 (680)
T 1gpu_A 238 KDKPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLKS-KFGF 281 (680)
T ss_dssp TTSCEEEEEECCTTTTSTTTTSGGGSSSCCCHHHHHHHHH-HTTC
T ss_pred CCCCEEEEEEeecccccccCCCCccCCCCCCHHHHHHHHH-HcCC
Confidence 38999999999999999988864 46999999999974 4443
No 12
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.94 E-value=1.1e-26 Score=243.22 Aligned_cols=153 Identities=22% Similarity=0.246 Sum_probs=133.8
Q ss_pred CCccCCCccccchhHHHHHHHHHHHhCC----------CCcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEecCC
Q 018967 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNH 231 (348)
Q Consensus 163 ~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~ 231 (348)
.++..++|++|+++|.|+|+|+|.++.+ +++.|+|++|||++++|.++|++++|+.++|| +|+||+||+
T Consensus 111 ~g~~~~~G~lG~gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~ 190 (651)
T 2e6k_A 111 PGVEVTTGPLGQGISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKLIVFWDDNR 190 (651)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECC
T ss_pred CCeeeccccccchHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeEEEEEECCC
Confidence 3778899999999999999999998765 68899999999999999999999999999999 889999999
Q ss_pred cccccccccccCCchHHhh--cCCcceE-EEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCCCC---
Q 018967 232 YGMGTAEWRAAKSPSYYKR--GDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTY--- 305 (348)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~--g~gipg~-~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~~~Y--- 305 (348)
|+++++..... .+++.++ +||++++ +|||||+.++.+|+++|++ .++|+||+++|+|++||++.|+ ..|
T Consensus 191 ~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~---~~~P~lI~~~t~kg~G~~~~~~-~~~H~~ 265 (651)
T 2e6k_A 191 ISIDGPTDLAF-TEDVLARYRAYGWQTLRVEDVNDLEALRKAIKLAKL---DERPTLIAVRSHIGFGSPKQDS-AKAHGE 265 (651)
T ss_dssp EETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTCHHHHHHHHHHHHH---SSSCEEEEEECCTTTTSTTTTS-GGGTSS
T ss_pred ccccccccccc-CccHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHH---CCCCEEEEEEeEeccccccccc-cccccc
Confidence 99988776554 5677764 5999999 9999999999999999886 4899999999999999995554 344
Q ss_pred -CCHHHHHHHHhcCCHH
Q 018967 306 -RTRDEISGVRQERDPI 321 (348)
Q Consensus 306 -R~~~e~~~~~~~~DPi 321 (348)
++++|+++|+ +++|+
T Consensus 266 ~~~~~e~~~~~-~~~~~ 281 (651)
T 2e6k_A 266 PLGPEAVEATR-RNLGW 281 (651)
T ss_dssp CCHHHHHHHHH-HHHTC
T ss_pred CCCHHHHHHHH-HHcCC
Confidence 6889999997 46665
No 13
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.94 E-value=5.5e-26 Score=238.68 Aligned_cols=149 Identities=19% Similarity=0.206 Sum_probs=127.1
Q ss_pred CccCCCccccchhHHHHHHHHHHHhC-------------CCCcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEec
Q 018967 164 GFYGGHGIVGAQIPLGCGLAFAQKYS-------------KDETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCEN 229 (348)
Q Consensus 164 ~~~~~~g~lG~~lp~A~G~A~A~k~~-------------~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~N 229 (348)
++..++|++|+++|+|+|+|+|.|+. +.+++|+|++|||++++|++|||+|+|+.|+|| +|+||+|
T Consensus 127 gv~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d~ 206 (700)
T 3rim_A 127 GVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDR 206 (700)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CccccccccCCcchHHHHHHHHHHHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEEC
Confidence 67788999999999999999999974 567899999999999999999999999999998 8999999
Q ss_pred CCcccccccccccCCchHHhh--cCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCC---
Q 018967 230 NHYGMGTAEWRAAKSPSYYKR--GDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGS--- 303 (348)
Q Consensus 230 N~~~i~~~~~~~~~~~~~~~~--g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~~--- 303 (348)
|+|+++++..... ..++.++ +||+++++| ||||+.+|++|+++|++. .++|+||+++|+|++||+......
T Consensus 207 N~~si~~~~~~~~-~~~~~~~~~a~G~~~~~V~DG~D~~al~~Al~~A~~~--~~~P~lI~~~T~kG~G~~~~e~~~~~H 283 (700)
T 3rim_A 207 NQISIEDDTNIAL-CEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAQAV--TDRPSFIALRTVIGYPAPNLMDTGKAH 283 (700)
T ss_dssp CSEETTEEGGGTC-CCCHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHC--CSSCEEEEEECCTTTTCTTTTTSHHHH
T ss_pred CCcccccchhhcc-chhHHHHHHHcCCeEEEECCCCCHHHHHHHHHHHHHc--CCCCEEEEEEEEeeecCCccCCCcccc
Confidence 9999998876544 4566664 589999999 999999999999999861 389999999999999998654321
Q ss_pred -CCCCHHHHHHHH
Q 018967 304 -TYRTRDEISGVR 315 (348)
Q Consensus 304 -~YR~~~e~~~~~ 315 (348)
.--++||++.++
T Consensus 284 g~~~~~e~~~~~~ 296 (700)
T 3rim_A 284 GAALGDDEVAAVK 296 (700)
T ss_dssp HSCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 124667776554
No 14
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.94 E-value=9.9e-26 Score=236.55 Aligned_cols=151 Identities=23% Similarity=0.232 Sum_probs=131.9
Q ss_pred CCccCCCccccchhHHHHHHHHHHHhCC----------CCcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEecCC
Q 018967 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNH 231 (348)
Q Consensus 163 ~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~ 231 (348)
.++..++|++|+++|.|+|+|+|.++.+ .++.|||++|||++++|.++|++++|+.++|| +|+||+||+
T Consensus 107 ~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~ 186 (669)
T 2r8o_A 107 AGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNG 186 (669)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred CCcccccccccchHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 3788899999999999999999998654 37899999999999999999999999999999 889999999
Q ss_pred cccccccccccCCchHHhh--cCCcceE-EEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCC-CCCC---CC
Q 018967 232 YGMGTAEWRAAKSPSYYKR--GDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSM-SDPG---ST 304 (348)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~--g~gipg~-~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~-~D~~---~~ 304 (348)
|+++.+..... .+++.++ +||++++ +|||||+.++.+|+++|++. .++|+||+++|+|..||+. .|+. ..
T Consensus 187 ~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~~--~~~P~lI~~~T~kg~G~~~~~~~~~~H~~ 263 (669)
T 2r8o_A 187 ISIDGHVEGWF-TDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAV--TDKPSLLMCKTIIGFGSPNKAGTHDSHGA 263 (669)
T ss_dssp EETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHC--CSSCEEEEEECCTTTTCTTTTTSGGGTSS
T ss_pred cEecccccccc-CccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHhc--CCCCEEEEEEeEeccCcCCcCCCCcccCC
Confidence 99988766443 4577664 5999999 99999999999999999861 3899999999999999994 5543 46
Q ss_pred CCCHHHHHHHHh
Q 018967 305 YRTRDEISGVRQ 316 (348)
Q Consensus 305 YR~~~e~~~~~~ 316 (348)
||+++|++.|++
T Consensus 264 ~~~~ee~~~~~~ 275 (669)
T 2r8o_A 264 PLGDAEIALTRE 275 (669)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 999999998874
No 15
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.93 E-value=1.2e-25 Score=235.95 Aligned_cols=150 Identities=21% Similarity=0.235 Sum_probs=131.9
Q ss_pred CccCCCccccchhHHHHHHHHHHHhCC----------CCcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEecCCc
Q 018967 164 GFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHY 232 (348)
Q Consensus 164 ~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~~ 232 (348)
++..++|++|+++|.|+|+|+|.++.+ .+++|+|++|||++++|.+||++++|+.|+|| +|+||+||+|
T Consensus 110 gv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~N~~ 189 (673)
T 1r9j_A 110 GVEVTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNYI 189 (673)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECSB
T ss_pred CeeeccCCCCCcHHHHHHHHHHHHHhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 677889999999999999999998764 58899999999999999999999999999999 8899999999
Q ss_pred ccccccccccCCchHHhh--cCCcceE-EEcC-CCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCC---CCC
Q 018967 233 GMGTAEWRAAKSPSYYKR--GDYVPGL-KVDG-MDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPG---STY 305 (348)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~--g~gipg~-~VDG-~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~---~~Y 305 (348)
+++++..... ..++.++ +||++++ .||| +|+.++++|+++|++. .++|+||+++|+|++||++.|.. ..+
T Consensus 190 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~Al~~A~~~--~~~P~lI~~~T~kg~G~~~~~~~~~H~~~ 266 (673)
T 1r9j_A 190 SIDGSTSLSF-TEQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKAT--KGKPKMIVQTTTIGFGSSKQGTEKVHGAP 266 (673)
T ss_dssp CSSSBGGGTC-CCCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHHC--CSSCEEEEEECCTTTTSTTTTSGGGTSSC
T ss_pred ccccchhhcc-CHhHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHHHHHc--CCCCEEEEEecccccccccCCCcccccCC
Confidence 9988776655 5677764 5999999 9999 9999999999998861 38999999999999999966652 246
Q ss_pred CCHHHHHHHHh
Q 018967 306 RTRDEISGVRQ 316 (348)
Q Consensus 306 R~~~e~~~~~~ 316 (348)
++++|++.+++
T Consensus 267 ~~~ee~~~~~~ 277 (673)
T 1r9j_A 267 LGEEDIANIKA 277 (673)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 89999998874
No 16
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.93 E-value=7.1e-25 Score=230.25 Aligned_cols=245 Identities=19% Similarity=0.171 Sum_probs=168.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHH---hcCC-------CCCEE-Ec-CCc
Q 018967 55 RSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGME---AGIT-------KKDSI-IT-AYR 122 (348)
Q Consensus 55 ~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~---~~l~-------~~D~i-~~-~yR 122 (348)
....|+.++|.++ ...+|.+-..+...... |+.-++.|.--+.+.+. ..++ +.|.+ ++ .|-
T Consensus 7 ~~~~l~~~~l~~~---a~~iR~~~~~~v~~a~~----GH~g~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr~vls~GH~ 79 (675)
T 1itz_A 7 QGKAATGELLEKS---VNTIRFLAIDAVEKANS----GHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVLSAGHG 79 (675)
T ss_dssp ---CCCHHHHHHH---HHHHHHHHHHHHHHHTC----SCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGG
T ss_pred ccCCCCHHHHHHH---HHHHHHHHHHHHHHcCC----CccCccHhHHHHHHHHHHHHhcCCcCCCCCCCCCeEEEcCcch
Confidence 4467888888764 44667655444443222 33233556555555554 2333 24654 45 465
Q ss_pred c---hHHHHhcCC---CHHHHHHHHhCCCCCCCCCCCCCcCCCCC-CCCccCCCccccchhHHHHHHHHHHHhCC-----
Q 018967 123 D---HCTFLGRGG---TLLEVFSELMGRKDGCSHGKGGSMHFYKK-DSGFYGGHGIVGAQIPLGCGLAFAQKYSK----- 190 (348)
Q Consensus 123 ~---~~~~l~~G~---~~~~~~ael~g~~~g~~~G~ggs~h~~~~-~~~~~~~~g~lG~~lp~A~G~A~A~k~~~----- 190 (348)
+ +.+.+..|. +.+++ .. +.+.. ++ -+.|.... ..++..++|++|+++|.|+|+|+|.++.+
T Consensus 80 ~~~lYa~l~l~G~~~~~~~~l-~~-~r~~~----~~-~~ghp~~~~~~~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~ 152 (675)
T 1itz_A 80 CMLQYALLHLAGYDSVKEEDL-KQ-FRQWG----SR-TPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNK 152 (675)
T ss_dssp HHHHHHHHHHHTCTTCCHHHH-TT-TTSTT----CS-SCSSCCTTTCTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCB
T ss_pred HHHHHHHHHHcCCCCCCHHHH-Hh-cccCC----CC-CCCCCCCCCCCCeeECCccHHhHHHHHHHHHHHhhhhcccccc
Confidence 5 444444554 32321 11 11110 11 01232211 13677889999999999999999998765
Q ss_pred -----CCcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEecCCcccccccccccCCchHHhh--cCCcceE-EEcC
Q 018967 191 -----DETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGL-KVDG 261 (348)
Q Consensus 191 -----~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~~~i~~~~~~~~~~~~~~~~--g~gipg~-~VDG 261 (348)
+++.|||++|||++++|.+||++++|+.++|| +|+||+||+|+|+.+..... .+++.++ +||++++ +|||
T Consensus 153 ~~~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG 231 (675)
T 1itz_A 153 PDSEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEALGWHTIWVKNG 231 (675)
T ss_dssp TTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCT
T ss_pred cccCCCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEECCCccCCCChhhhc-ChhHHHHHHhCCCEEEEEecC
Confidence 78899999999999999999999999999995 88999999999988766544 5677764 5999999 9999
Q ss_pred C-CHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCC----CCCCHHHHHHHHh
Q 018967 262 M-DALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGS----TYRTRDEISGVRQ 316 (348)
Q Consensus 262 ~-D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~~----~YR~~~e~~~~~~ 316 (348)
| |+.++.+|+++|++. .++|+||+++|+|.+||+...++. .+.+++|++++++
T Consensus 232 ~~d~~~l~~al~~a~~~--~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~e~~~~~~~ 289 (675)
T 1itz_A 232 NTGYDDIRAAIKEAKAV--TDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRQ 289 (675)
T ss_dssp TTCHHHHHHHHHHHHHC--CSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC--CCCeEEEEEeeecccCcccccCcccccCCCCCHHHHHHHHH
Confidence 9 999999999998862 389999999999999998643321 3567888877763
No 17
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.93 E-value=4.4e-24 Score=222.09 Aligned_cols=143 Identities=22% Similarity=0.319 Sum_probs=119.7
Q ss_pred cCCCCCCCCccCCCccccchhHHHHHHHHHHHhCCC-CcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEecCCcc
Q 018967 156 MHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKD-ETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHYG 233 (348)
Q Consensus 156 ~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~-~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~~~ 233 (348)
.|......++..++|++|+++|+|+|+|+|.++.+. ++.|||++|||++++|.+||++|+|+.|+|| +|+|++||+|+
T Consensus 107 ghp~~~~~~~d~~~G~lG~gl~~A~G~AlA~~~~~~~~~~vv~v~GDG~~~eG~~~Eal~~A~~~~l~~livi~nnN~~~ 186 (616)
T 3mos_A 107 GHPVPKQAFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLG 186 (616)
T ss_dssp SSCCTTSTTCSSCCCSTTCHHHHHHHHHHHHHHTSCCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCTTEEEEEEECSBC
T ss_pred CCCCCCCCcccccccccCCccHHHHHHHHHHHHhCCCCCEEEEEECccccccCcHHHHHHHHHHcCCCcEEEEEECCCCC
Confidence 344333335556899999999999999999986554 6899999999999999999999999999999 67889999999
Q ss_pred cccccccccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCC
Q 018967 234 MGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGS 303 (348)
Q Consensus 234 i~~~~~~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~~ 303 (348)
++.+.......+++.++ +||+++++|||||+.++.++++.+ .++|+||+++|+|++||+..+++.
T Consensus 187 i~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~~-----~~~P~lI~v~T~kg~G~~~~e~~~ 253 (616)
T 3mos_A 187 QSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQA-----KHQPTAIIAKTFKGRGITGVEDKE 253 (616)
T ss_dssp SSSBCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHSC-----CSSCEEEEEECCTTTTSTTTTTCS
T ss_pred CcCCcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhc-----CCCCEEEEEEEecccccccccCch
Confidence 98876655545677664 599999999999999999998543 389999999999999998776554
No 18
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.92 E-value=3.6e-24 Score=229.70 Aligned_cols=264 Identities=16% Similarity=0.059 Sum_probs=170.4
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--hcccccccccCCChhHHHHHH-HHhcCC------CC
Q 018967 44 PFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLY--KAKLVRGFCHLYDGQEAVAIG-MEAGIT------KK 114 (348)
Q Consensus 44 ~~~~~~~e~~~~~~~~s~e~l~~~y~~M~~~R~~e~~~~~l~--~~g~~~gf~h~~~GqEa~~vg-~~~~l~------~~ 114 (348)
|| ...|..|.+.....+.+|.+-+. ..+|.+-..+...- +.+++.|+.-++.|.--+.+. ....++ ++
T Consensus 58 ~~-l~~i~~~~~~~~p~d~~l~~~la--~~iR~~~i~~v~~a~~~~~~~gGH~gs~ls~ael~~~l~~~~~~~~~~~~~~ 134 (886)
T 2qtc_A 58 NY-INTIPVEEQPEYPGNLELERRIR--SAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGG 134 (886)
T ss_dssp CS-SCSSCGGGCCCCCSCHHHHHHHH--HHHHHHHHHHHHHHHHTCSCCCCCSHHHHHHHHHHHHHHHHTCCCCCSSSCC
T ss_pred ch-hhhCCCccccCCCchHHHHHHHH--HHHHHHHHHHHHHhcCCCCCCccCcCCcHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 44 34554444444444556653333 34555443333321 223445544444554444433 344467 57
Q ss_pred CEEEc-CCcc---hHHHHhcCCCHHHHHHHHhCCCCCCCCCCCCCcCCCCC--CCCccCCCccccchhHHHHHHHHHHHh
Q 018967 115 DSIIT-AYRD---HCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKK--DSGFYGGHGIVGAQIPLGCGLAFAQKY 188 (348)
Q Consensus 115 D~i~~-~yR~---~~~~l~~G~~~~~~~ael~g~~~g~~~G~ggs~h~~~~--~~~~~~~~g~lG~~lp~A~G~A~A~k~ 188 (348)
|+|+. .|-+ +++.+..|.-..+-|..+ -+. +...|- +.|.... ..++..++|++|.+++.|+|+|+|.|+
T Consensus 135 D~V~~~GH~sp~~Ya~~~l~Gr~~~e~l~~f-Rq~-~~~~gl--~~~p~~~~~p~~~~~~tG~~G~g~s~AiG~A~a~~~ 210 (886)
T 2qtc_A 135 DLVYFQGHISPGVYARAFLEGRLTQEQLDNF-RQE-VHGNGL--SSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKY 210 (886)
T ss_dssp CEEECCGGGHHHHHHHHHHTTSSCHHHHTTB-TCC-TTSSCB--CSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEcchhHHHHHHHHHHhCCCCHHHHHhc-cCC-CCCCCC--CCCCCcccCCCcccccccccCccHHHHHHHHHHhhh
Confidence 87777 4666 455556675322222221 111 111111 2222111 113677899999999999999999998
Q ss_pred -------CCCCcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEecCCccccccccccc-CCchHHh--hcCCcceE
Q 018967 189 -------SKDETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAA-KSPSYYK--RGDYVPGL 257 (348)
Q Consensus 189 -------~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~~~i~~~~~~~~-~~~~~~~--~g~gipg~ 257 (348)
++.++.|||++|||++++|.+|||+|+|+.++|+ +||||+||+++++.+..... ...++.+ +++|.+.+
T Consensus 211 l~~~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~N~~si~~~v~~~~~~~~~l~~~~~~~G~~~~ 290 (886)
T 2qtc_A 211 LEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVI 290 (886)
T ss_dssp HHHTTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEE
T ss_pred hcccccccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEECCCcccCCCccccccccHHHHHHHHhCCCCEE
Confidence 7889999999999999999999999999999997 89999999999988765421 2234444 35788888
Q ss_pred EE---------------------------------------------------------------------cCCCHHHHH
Q 018967 258 KV---------------------------------------------------------------------DGMDALAVK 268 (348)
Q Consensus 258 ~V---------------------------------------------------------------------DG~D~~av~ 268 (348)
+| ||||+.+|+
T Consensus 291 ~v~~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~~~r~~~F~~~~~~~~l~~~~~d~~i~~l~~dGhD~~~l~ 370 (886)
T 2qtc_A 291 KVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIY 370 (886)
T ss_dssp EECBCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTSTTSHHHHTTTTTCCHHHHHTCCBGGGCHHHHH
T ss_pred EEecchhHHHHHccCCchHHHHHHHhccchhhhhhhhccchHHHHhhcccchHHHHHHhhcChhhHhhcccCCCCHHHHH
Confidence 87 799999999
Q ss_pred HHHHHHHHHhccCCCEEEEEEEecCCCCCC--CCCCC----CCCCHHHHHHHHh
Q 018967 269 QACKFAKEHALKNGPMILEMDTYRYHGHSM--SDPGS----TYRTRDEISGVRQ 316 (348)
Q Consensus 269 ~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~--~D~~~----~YR~~~e~~~~~~ 316 (348)
+|+++|+++ .++|+||+++|+|++||+. .++.. .|++.+|++.|++
T Consensus 371 ~a~~~A~~~--~~~PtlI~~~T~KG~G~~~~~e~~~~~H~~~~l~~~~~~~~r~ 422 (886)
T 2qtc_A 371 AAFKKAQET--KGKATVILAHTIKGYGMGDAAKGKNIAHQVKKMNMDGVRHIRD 422 (886)
T ss_dssp HHHHHHHHC--CSSCEEEEEECCTTTTCTTCC-------------CHHHHHHHH
T ss_pred HHHHHHHHc--CCCCEEEEEeeeeccccchhhcCCccccCCCCCCHHHHHHHHH
Confidence 999999874 3699999999999999973 33322 2889999998874
No 19
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.92 E-value=4e-24 Score=223.83 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=120.0
Q ss_pred CccCCCccccchhHHHHHHHHHHHhCCC----------CcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEecCCc
Q 018967 164 GFYGGHGIVGAQIPLGCGLAFAQKYSKD----------ETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHY 232 (348)
Q Consensus 164 ~~~~~~g~lG~~lp~A~G~A~A~k~~~~----------~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~~ 232 (348)
++..++|++|+++|+|+|+|+|.++.+. ++.|+|++|||++++|.++|++++|+.|+|| +|+||+||+|
T Consensus 110 gve~~tG~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dnN~~ 189 (663)
T 3kom_A 110 GVETTTGPLGQGVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDDNNI 189 (663)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECC-
T ss_pred CcccCCcchhhHHHHHHHHHHhHHhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEECCCc
Confidence 5677899999999999999999987543 7899999999999999999999999999999 7899999999
Q ss_pred ccccccccccCCchHHhh--cCCcceE-EEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCC--CC--
Q 018967 233 GMGTAEWRAAKSPSYYKR--GDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGS--TY-- 305 (348)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~--g~gipg~-~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~~--~Y-- 305 (348)
+++++..... .+++.++ +||++++ +|||||+.++.+|+++|++. .++|+||+++|+|++||+...+.. ++
T Consensus 190 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~A~~~--~~~P~lI~~~T~kg~G~~~~e~~~~~Hg~~ 266 (663)
T 3kom_A 190 SIDGDTKGWF-SDNTPERFRAYGWHVIENVDGHDFVAIEKAINEAHSQ--QQKPTLICCKTVIGFGSPEKAGTASVHGSP 266 (663)
T ss_dssp ----CGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHC--SSSCEEEEEECCTTTTCTTTTTCSSTTSSC
T ss_pred ccccchhhhc-chhHHHHHHHCCCeEEEEEcCCCHHHHHHHHHHHHhc--CCCCEEEEEecccccccCCCCCCccccCCC
Confidence 9988766543 4577764 5999999 99999999999999988762 389999999999999998654322 22
Q ss_pred CCHHHHHHH
Q 018967 306 RTRDEISGV 314 (348)
Q Consensus 306 R~~~e~~~~ 314 (348)
-++||++..
T Consensus 267 l~~e~~~~~ 275 (663)
T 3kom_A 267 LSDQERASA 275 (663)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 256666654
No 20
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.92 E-value=5.4e-24 Score=221.65 Aligned_cols=236 Identities=17% Similarity=0.168 Sum_probs=161.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCChhHHHHHHHHhcCC---------CCCEEEc--CCcc---hHH
Q 018967 61 PKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT---------KKDSIIT--AYRD---HCT 126 (348)
Q Consensus 61 ~e~l~~~y~~M~~~R~~e~~~~~l~~~g~~~gf~h~~~GqEa~~vg~~~~l~---------~~D~i~~--~yR~---~~~ 126 (348)
.+++.++ ...+|.+=..+...-.. |+.-++.|.--+.+.+...|+ +.|.++- .|-+ +.+
T Consensus 3 ~~~l~~~---a~~iR~~~i~~v~~a~~----GH~g~~lg~~ei~~~L~~~~~~~p~~p~~~~rDrfvls~GH~~~~lYa~ 75 (632)
T 3l84_A 3 IQILQEQ---ANTLRFLSADMVQKANS----GHPGAPLGLADILSVLSYHLKHNPKNPTWLNRDRLVFSGGHASALLYSF 75 (632)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHTC----SCCHHHHHHHHHHHHHTTTCCCCTTCTTCTTSCEEEESSGGGHHHHHHH
T ss_pred HHHHHHH---HHHHHHHHHHHHHhcCC----CCCCcChhHHHHHHHHHHHhCcCCCCCCCCCCCEEEEcCCcccHHHHHH
Confidence 3444443 34566554444332222 332235566666666655564 4676554 4666 444
Q ss_pred HHhcCC--CHHHHHHHHhCCCCCCCCCCCCCcCCCCCCCCccCCCccccchhHHHHHHHHHHHhCCC-------CcEEEE
Q 018967 127 FLGRGG--TLLEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKD-------ETVTFA 197 (348)
Q Consensus 127 ~l~~G~--~~~~~~ael~g~~~g~~~G~ggs~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~-------~~~vv~ 197 (348)
....|. +.+++. . +.+..+.+ +.|.-....++..++|++|+++|.|+|+|+|.++.+. ++.|+|
T Consensus 76 l~l~G~~~~~~~l~-~-~r~~~s~~-----~ghp~~~~~g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~ 148 (632)
T 3l84_A 76 LHLSGYDLSLEDLK-N-FRQLHSKT-----PGHPEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYC 148 (632)
T ss_dssp HHHHTCSCCHHHHT-T-TTCTTCSS-----CSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTTCCCCEEE
T ss_pred HHHhCCCCCHHHHH-H-HhcCCCCC-----CCCCCCCCCCcccCCcchhhHHHHHHHHHHHHHhhccccccCCCCCeEEE
Confidence 444554 444421 1 11111111 1233222246778899999999999999999997653 889999
Q ss_pred EeCCccccchhHHHHHHHHHHCCCC-eEEEEecCCcccccccccccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHH
Q 018967 198 LYGDGAANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFA 274 (348)
Q Consensus 198 ~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~~~i~~~~~~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A 274 (348)
++|||++++|.++|++++|+.|+|| +|+|++||+|+++.+..... .+++.++ +||+++++|||||+.++.+|+++|
T Consensus 149 v~GDG~~~eG~~~Eal~~A~~~~L~~livi~nnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~vdGhd~~~l~~al~~A 227 (632)
T 3l84_A 149 LCGDGDLQEGISYEACSLAGLHKLDNFILIYDSNNISIEGDVGLAF-NENVKMRFEAQGFEVLSINGHDYEEINKALEQA 227 (632)
T ss_dssp EEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEETTCHHHHHHHHHHH
T ss_pred EECCcchhhccHHHHHHHHHHcCCCcEEEEEECCCcccccchhhhc-ChhHHHHHHHcCCeEEEEeeCCHHHHHHHHHHH
Confidence 9999999999999999999999999 78999999999988765543 4567664 599999999999999999999887
Q ss_pred HHHhccCCCEEEEEEEecCCCCCCCCCCC--CC--CCHHHHHHH
Q 018967 275 KEHALKNGPMILEMDTYRYHGHSMSDPGS--TY--RTRDEISGV 314 (348)
Q Consensus 275 ~~~ar~~gP~lIe~~t~R~~GHs~~D~~~--~Y--R~~~e~~~~ 314 (348)
++ .++|+||+++|+|++||+...+.. ++ -++||++..
T Consensus 228 ~~---~~~P~lI~v~T~kG~G~~~~e~~~~~Hg~~l~~e~~~~~ 268 (632)
T 3l84_A 228 KK---STKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKA 268 (632)
T ss_dssp HT---CSSCEEEEEECCTTTTCGGGTTCGGGSSSCCCHHHHHHH
T ss_pred Hh---CCCCEEEEEeeEeeecCCCCCCcccccCCCCCHHHHHHH
Confidence 64 389999999999999998643321 22 245666554
No 21
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.91 E-value=4.2e-24 Score=224.86 Aligned_cols=148 Identities=22% Similarity=0.255 Sum_probs=113.6
Q ss_pred CccCCCccccchhHHHHHHHHHHHhCCC----------CcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEecCCc
Q 018967 164 GFYGGHGIVGAQIPLGCGLAFAQKYSKD----------ETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHY 232 (348)
Q Consensus 164 ~~~~~~g~lG~~lp~A~G~A~A~k~~~~----------~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~~ 232 (348)
++..++|++|+++|.|+|+|+|.++.+. ++.|||++|||++++|.++|++++|+.++|| +|+||+||+|
T Consensus 149 gve~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~ 228 (711)
T 3uk1_A 149 GVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGI 228 (711)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSE
T ss_pred CcccCccchhhHHHHHHHHHHHHHhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEECCCc
Confidence 6677899999999999999999987543 7899999999999999999999999999999 8899999999
Q ss_pred ccccccccccCCchHHhh--cCCcceEE-EcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCCCCC---
Q 018967 233 GMGTAEWRAAKSPSYYKR--GDYVPGLK-VDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYR--- 306 (348)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~--g~gipg~~-VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~~~YR--- 306 (348)
+++.+..... .+++.++ +||+++++ |||||+.++.+|+++|++ .++|+||+++|+|++||+...++..|.
T Consensus 229 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~Al~~A~~---~~~P~lI~v~T~kG~G~~~~e~~~~~Hg~~ 304 (711)
T 3uk1_A 229 SIDGDVVNWF-HDDTPKRFEAYGWNVIPNVNGHDVDAIDAAIAKAKR---SDKPSLICCKTRIGNGAATKAGGHDVHGAP 304 (711)
T ss_dssp ETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHTT---CSSCEEEEEEC-------------------
T ss_pred ccccchhhhc-CCCHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHHHh---CCCCEEEEEccccccCCCCCCCcccccCCC
Confidence 9988766543 4677764 59999998 899999999999988754 389999999999999998644333232
Q ss_pred -CHHHHHHHH
Q 018967 307 -TRDEISGVR 315 (348)
Q Consensus 307 -~~~e~~~~~ 315 (348)
++||++..+
T Consensus 305 l~~e~~~~~~ 314 (711)
T 3uk1_A 305 LGADEIAKTR 314 (711)
T ss_dssp -CHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 456665543
No 22
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.90 E-value=2.4e-23 Score=218.64 Aligned_cols=149 Identities=25% Similarity=0.282 Sum_probs=123.7
Q ss_pred CccCCCccccchhHHHHHHHHHHHhCCC----------CcEEEEEeCCccccchhHHHHHHHHHHCCCC-eEEEEecCCc
Q 018967 164 GFYGGHGIVGAQIPLGCGLAFAQKYSKD----------ETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHY 232 (348)
Q Consensus 164 ~~~~~~g~lG~~lp~A~G~A~A~k~~~~----------~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LP-vI~Vv~NN~~ 232 (348)
++..++|++|+++|.|+|+|+|.++.+. ++.|+|++|||++++|.++|++++|+.++|| +|+|++||+|
T Consensus 134 gv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~~ 213 (690)
T 3m49_A 134 GVDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLYDSNDI 213 (690)
T ss_dssp TCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSB
T ss_pred ccccCCccccccHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEEECCCe
Confidence 5667899999999999999999986542 7899999999999999999999999999998 7899999999
Q ss_pred ccccccccccCCchHHhh--cCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCCCC----
Q 018967 233 GMGTAEWRAAKSPSYYKR--GDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTY---- 305 (348)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~--g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~~~Y---- 305 (348)
+++.+..... .+++.++ +||+++++| ||+|+.++.+|+++|++. .++|+||+++|+|.+|++...++..|
T Consensus 214 ~i~~~~~~~~-~~d~~~~~~a~G~~~~~v~DG~d~~~l~~Al~~a~~~--~~~P~lI~v~T~kG~G~~~~~~~~~~Hg~~ 290 (690)
T 3m49_A 214 SLDGDLNRSF-SESVEDRYKAYGWQVIRVEDGNDIEAIAKAIEEAKAD--EKRPTLIEVRTTIGFGSPNKSGKSASHGSP 290 (690)
T ss_dssp CSSSBGGGTC-CCCHHHHHHHHTCEEEEESCTTCHHHHHHHHHHHHHC--CSSCEEEEEECCTTTTCTTTTTSGGGTSSC
T ss_pred ecccchhhcc-chhHHHHHHHcCCcEEEEecCCCHHHHHHHHHHHHhc--CCCCEEEEEEeecccccCcccCcccccCCC
Confidence 9988765443 4566664 589999999 999999999999888751 28999999999999999854433212
Q ss_pred CCHHHHHHHH
Q 018967 306 RTRDEISGVR 315 (348)
Q Consensus 306 R~~~e~~~~~ 315 (348)
-++||++..+
T Consensus 291 ~~~e~~~~~~ 300 (690)
T 3m49_A 291 LGVEETKLTK 300 (690)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 2566666554
No 23
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.88 E-value=5e-23 Score=213.52 Aligned_cols=162 Identities=17% Similarity=0.221 Sum_probs=125.9
Q ss_pred CCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-ccccccc--------
Q 018967 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAE-------- 238 (348)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~~i~~~~-------- 238 (348)
+.|++|+++|.|+|++++. +++.|||++|||+++++ +++|++|+.+++|+++||.||+ |++.+..
T Consensus 418 ~~g~~G~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~~~~~~~~~~ 491 (603)
T 4feg_A 418 LFATMGVGIPGAIAAKLNY----PERQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQND 491 (603)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHCSSC
T ss_pred ccccccchhHHHhhHHHhC----CCCcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHHHHHHhcCCC
Confidence 4689999999999999985 57899999999999986 5669999999999988887776 8863211
Q ss_pred --ccccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEE---ecCCCCCCCCCCCCCCCHH--
Q 018967 239 --WRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDT---YRYHGHSMSDPGSTYRTRD-- 309 (348)
Q Consensus 239 --~~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t---~R~~GHs~~D~~~~YR~~~-- 309 (348)
......+||.++ +||+++++|| ++.++.+++++|++ ...+||+|||+.| +|+.+|...|+++.||..+
T Consensus 492 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~-~~~~gP~lIev~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (603)
T 4feg_A 492 FIGVEFNDIDFSKIADGVHMQAFRVN--KIEQLPDVFEQAKA-IAQHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADIE 568 (603)
T ss_dssp CCSSBCCCCCHHHHHHHTTCEEEEEC--BGGGHHHHHHHHHH-HTTTSCEEEEEECCCCCCCCTTSCCCCTTTSCHHHHH
T ss_pred cccCcCCCCCHHHHHHHCCCeEEEEC--CHHHHHHHHHHHHH-hcCCCcEEEEEEeCCCCCCCcccchhhhhhhhHHHHH
Confidence 112234678875 5999999998 45678888888763 1138999999999 6677899999888898665
Q ss_pred HHHHHHhcCCHHHHHHHHHHHcCCCCHHHH
Q 018967 310 EISGVRQERDPIERIRKLILAHDLATEKEL 339 (348)
Q Consensus 310 e~~~~~~~~DPi~~~~~~L~~~g~~t~~el 339 (348)
|..+|. ++||+.+|+++|.++|++++++.
T Consensus 569 ~~~~~~-~~d~~~~~~~~l~~~g~~~~~~~ 597 (603)
T 4feg_A 569 AFKQRY-EAQDLQPLSTYLKQFGLDDLQHQ 597 (603)
T ss_dssp HHHHHH-TCTTCCCHHHHHHHTTC------
T ss_pred HHHhhC-CcccCCchHHHHHHcCCchhhhh
Confidence 666665 59999999999999999998754
No 24
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.63 E-value=6.2e-16 Score=159.88 Aligned_cols=119 Identities=16% Similarity=0.232 Sum_probs=98.3
Q ss_pred CCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC-Ccccccccccc-----
Q 018967 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEWRA----- 241 (348)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN-~~~i~~~~~~~----- 241 (348)
+.|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+++++|+++||.|| +|++.......
T Consensus 411 ~~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~q~~~~~~~ 484 (590)
T 1v5e_A 411 LFATMGIAIPGGLGAKNTY----PDRQVWNIIGDGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKNL 484 (590)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGTTSSSCCSC
T ss_pred CCCcccChHHHHHHHHHhC----CCCeEEEEEechHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHHHHHhcCCC
Confidence 5799999999999999985 57889999999999986 588999999999987776555 68887643211
Q ss_pred ----cCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCC
Q 018967 242 ----AKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYH 294 (348)
Q Consensus 242 ----~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~ 294 (348)
...+||.+. +||+++++|+ ++.++.+++++|++.+|.+||+|||+.|+|..
T Consensus 485 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~gp~liev~~~~~~ 541 (590)
T 1v5e_A 485 FGVDFTDVDYAKIAEAQGAKGFTVS--RIEDMDRVMAEAVAANKAGHTVVIDCKITQDR 541 (590)
T ss_dssp CCCCCCCCCHHHHHHHTTSEEEEEC--BHHHHHHHHHHHHHHHHTTCCEEEEEECCSCC
T ss_pred ccccCCCCCHHHHHHHcCCEEEEEC--CHHHHHHHHHHHHHhcCCCCCEEEEEEecccc
Confidence 134678775 5999999997 58899999999998765689999999999854
No 25
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.60 E-value=9.2e-16 Score=159.23 Aligned_cols=120 Identities=24% Similarity=0.259 Sum_probs=97.3
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-ccccccccc-----
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAEWR----- 240 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~~i~~~~~~----- 240 (348)
+++|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+++++|+++||.||+ |++.+....
T Consensus 439 g~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 512 (616)
T 2pan_A 439 GQAGPLGWTIPAALGVCAAD----PKRNVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMD 512 (616)
T ss_dssp TTTCCTTCHHHHHHHHHHHC----TTCEEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHGGGGTCC
T ss_pred CCcccccchHHHHHHHHHhC----CCCcEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHHHHHHhcCC
Confidence 45799999999999999985 57899999999999886 5679999999999876666665 887543110
Q ss_pred -----------ccC----CchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCC
Q 018967 241 -----------AAK----SPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYH 294 (348)
Q Consensus 241 -----------~~~----~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~ 294 (348)
... ..||.+. +||+++++|+ ++.++.+++++|+++++. +||+|||+.|+|..
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 513 YCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVF--KPEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp CSCBCCCCCTTCGGGTTCCCCHHHHHHHTTCEEEEEC--SGGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred ccccccccccccccCCCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 011 2577774 5999999997 577999999999987776 99999999999865
No 26
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.58 E-value=1.9e-15 Score=155.16 Aligned_cols=116 Identities=21% Similarity=0.215 Sum_probs=94.0
Q ss_pred CCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC-Ccccccccc-------
Q 018967 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------- 239 (348)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN-~~~i~~~~~------- 239 (348)
+.|++|+++|.|+|+|+|.| ++++.|||++|||+++++ +++|++|+++++|+++||.|| +|++.....
T Consensus 417 g~g~~G~~l~~AiGaa~a~~--~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 492 (563)
T 2uz1_A 417 YLGSMGVGFGTALGAQVADL--EAGRRTILVTGDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLHFQQLAVGPN 492 (563)
T ss_dssp TTCCTTTHHHHHHHHHHHHH--HHTCEEEEEEEHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCTT
T ss_pred CCccccChHHHHHHHHHHhh--CCCCeEEEEEccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHHHHHHhcCCC
Confidence 46999999999999999986 568899999999999986 467999999999987666555 588765321
Q ss_pred ccc----CCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 240 RAA----KSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 240 ~~~----~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
+.. ..+||.+. +||+++++|+ ++.++.+++++|++ .+||+|||+.|++
T Consensus 493 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~---~~gp~liev~~~~ 546 (563)
T 2uz1_A 493 RVTGTRLENGSYHGVAAAFGADGYHVD--SVESFSAALAQALA---HNRPACINVAVAL 546 (563)
T ss_dssp CCCSCBCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH---SSSCEEEEEECCS
T ss_pred cccCCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHH---CCCCEEEEEEecc
Confidence 111 23578774 5999999996 68899999998876 3899999999974
No 27
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.57 E-value=1.4e-15 Score=156.12 Aligned_cols=120 Identities=14% Similarity=0.093 Sum_probs=94.2
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-cccccccc------
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAEW------ 239 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~~i~~~~~------ 239 (348)
++.|++|+++|.|+|+|+|.+.++.++.|||++|||+++++ +++|++|+++++|+++||.||+ |++.+...
T Consensus 410 ~~~g~mG~~l~~A~Gaala~~~~~~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 487 (563)
T 2vk8_A 410 VLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLT--VQEISTMIRWGLKPYLFVLNNDGYTIQKLIHGPKAQY 487 (563)
T ss_dssp TTTCCTTHHHHHHHHHHHHHHHHCTTCCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred cchhhhhhHHHHHHHHHHhCcccCCCCCEEEEEcchHhhcc--HHHHHHHHHcCCCcEEEEEECCcchhhhhhhCCCCCc
Confidence 45799999999999999999888888999999999999885 5679999999999877776555 88754321
Q ss_pred cccCCchHHhh--cCCcc---eEEEcCCCHHHHHHHHH-HHHHHhccCCCEEEEEEEec
Q 018967 240 RAAKSPSYYKR--GDYVP---GLKVDGMDALAVKQACK-FAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 240 ~~~~~~~~~~~--g~gip---g~~VDG~D~~av~~a~~-~A~~~ar~~gP~lIe~~t~R 292 (348)
.....+||.++ +||++ +++|| +++++.++++ ++++. .++|+|||+.|++
T Consensus 488 ~~~~~~d~~~~a~a~G~~~~~~~~v~--~~~el~~al~~~a~~~--~~~p~liev~~~~ 542 (563)
T 2vk8_A 488 NEIQGWDHLSLLPTFGAKDYETHRVA--TTGEWDKLTQDKSFND--NSKIRMIEVMLPV 542 (563)
T ss_dssp GCCCCCCGGGHHHHTTCSSEEEEEEC--BHHHHHHHHTCTTTTS--CSSEEEEEEECCT
T ss_pred ccCCCCCHHHHHHHhCCCCCcEEEec--CHHHHHHHHHHHHHhC--CCCcEEEEEEeCc
Confidence 11134577764 59999 99998 5778888887 55531 1479999999975
No 28
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.57 E-value=2.4e-15 Score=154.76 Aligned_cols=116 Identities=17% Similarity=0.200 Sum_probs=93.1
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC-Ccccccccc------
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------ 239 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN-~~~i~~~~~------ 239 (348)
++.|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+.+++|+++||.|| +|++.....
T Consensus 417 ~g~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 490 (566)
T 1ozh_A 417 NGQQTMGVALPWAIGAWLVN----PERKVVSVSGDGGFLQS--SMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQR 490 (566)
T ss_dssp CTTCCTTCHHHHHHHHHHHS----TTSEEEEEEEHHHHHHH--TTHHHHHHHHTCCEEEEEEECSBCHHHHHHHHHHHSS
T ss_pred CCcccccchHHHHHHHHHhC----CCCCEEEEEcChHHhcc--HHHHHHHHHhCCCcEEEEEECCchhHHHHHHHHhcCC
Confidence 34699999999999999985 57899999999999885 466999999999987666666 588765322
Q ss_pred ---cccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecC
Q 018967 240 ---RAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (348)
Q Consensus 240 ---~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~ 293 (348)
.....+||.+. +||+++++|+ +++++.+++++|++ .+||+|||+.|+|.
T Consensus 491 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~---~~gp~liev~~~~~ 544 (566)
T 1ozh_A 491 LSGVEFGPMDFKAYAESFGAKGFAVE--SAEALEPTLRAAMD---VDGPAVVAIPVDYR 544 (566)
T ss_dssp CCSCBCCCCCHHHHHHTTTSEEEECC--SGGGHHHHHHHHHH---SSSCEEEEEEBCCT
T ss_pred CccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEEeCCC
Confidence 12234678774 5999999997 46788999988875 38999999999863
No 29
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.56 E-value=2.1e-15 Score=153.63 Aligned_cols=112 Identities=30% Similarity=0.401 Sum_probs=90.7
Q ss_pred ccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-ccccccccc--------
Q 018967 170 GIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAEWR-------- 240 (348)
Q Consensus 170 g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~~i~~~~~~-------- 240 (348)
|++|+++|.|+|+|+|. +++.|||++|||+++++ +|+|++|+.+++|+++||.||+ |++.+....
T Consensus 401 g~~G~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~ 474 (528)
T 1q6z_A 401 GGLGFALPAAIGVQLAE----PERQVIAVIGDGSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVP 474 (528)
T ss_dssp CCTTSHHHHHHHHHHHC----TTSCEEEEEEHHHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCCSCC
T ss_pred ccccchHHHHHHHHHhC----CCCcEEEEECCcHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHHhcCCCcc
Confidence 99999999999999985 56789999999999987 6889999999999888776665 888654211
Q ss_pred --ccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 241 --AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 241 --~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
.....||.+. +||+++++||+ .+++.+++++|++ .+||+|||+.|.|
T Consensus 475 ~~~~~~~d~~~~a~a~G~~~~~v~~--~~~l~~al~~a~~---~~gp~liev~~~~ 525 (528)
T 1q6z_A 475 GLDVPGIDFRALAKGYGVQALKADN--LEQLKGSLQEALS---AKGPVLIEVSTVS 525 (528)
T ss_dssp SCBCCCCCHHHHHHHHTCEEEEESS--HHHHHHHHHHHHT---CSSCEEEEEEBCC
T ss_pred cCCCCCCCHHHHHHHcCCeEEEeCC--HHHHHHHHHHHHH---CCCcEEEEEEecC
Confidence 1134578774 59999999984 6688888877764 3899999999975
No 30
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.55 E-value=3.9e-15 Score=153.25 Aligned_cols=114 Identities=21% Similarity=0.265 Sum_probs=92.4
Q ss_pred CCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-cccccccc-------
Q 018967 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAEW------- 239 (348)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~~i~~~~~------- 239 (348)
+.|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+.+++|+++||.||+ |++.....
T Consensus 434 g~g~mG~~l~~AiGaa~a~----~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~~ 507 (573)
T 2iht_A 434 GCSSFGYGIPAAIGAQMAR----PDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIELYQNIGHHRS 507 (573)
T ss_dssp SSCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHHSSC
T ss_pred CCcccccHHHHHHHHHHhC----CCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHHHHHHhcCCC
Confidence 4699999999999999985 57889999999999886 5689999999999876665554 88765421
Q ss_pred ----cccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 240 ----RAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 240 ----~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
.....+||.+. +||+++++|+ ++.++.+++++|++ .+||+|||+.|.|
T Consensus 508 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~---~~gp~liev~~~~ 561 (573)
T 2iht_A 508 HDPAVKFGGVDFVALAEANGVDATRAT--NREELLAALRKGAE---LGRPFLIEVPVNY 561 (573)
T ss_dssp CGGGTBCCCCCHHHHHHHTTCEEEECC--SHHHHHHHHHHHHT---SSSCEEEEEEBCC
T ss_pred cCccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEECCC
Confidence 22234678774 5999999996 67888888888774 3899999999998
No 31
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.54 E-value=7.1e-15 Score=151.83 Aligned_cols=119 Identities=21% Similarity=0.298 Sum_probs=94.2
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC-Ccccccccc------
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------ 239 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN-~~~i~~~~~------ 239 (348)
+++|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+++++|+++||.|| +|++.....
T Consensus 423 g~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 496 (590)
T 1ybh_A 423 GGLGAMGFGLPAAIGASVAN----PDAIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKA 496 (590)
T ss_dssp CSSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHHHHHHHSTT
T ss_pred CCcccccchHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHHHHHHhcCC
Confidence 44699999999999999985 57889999999999886 567999999999977665555 688754211
Q ss_pred ----cc--c------CCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCC
Q 018967 240 ----RA--A------KSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGH 296 (348)
Q Consensus 240 ----~~--~------~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GH 296 (348)
.. . ..+||.+. +||+++++|+ ++.++.+++++|++ .+||+|||+.|+|....
T Consensus 497 ~~~~~~~~~p~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~---~~gp~liev~~~~~~~~ 562 (590)
T 1ybh_A 497 NRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVT--KKADLREAIQTMLD---TPGPYLLDVICPHQEHV 562 (590)
T ss_dssp CCCSCBCSCGGGTTSCSSCHHHHHHHTTCCEEEEC--BHHHHHHHHHHHHH---SSSCEEEEEECCTTCCC
T ss_pred ccccccccccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEEecCCccc
Confidence 00 1 13578774 5999999997 68899999988875 38999999999987643
No 32
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.54 E-value=5.2e-15 Score=152.87 Aligned_cols=119 Identities=23% Similarity=0.322 Sum_probs=95.4
Q ss_pred CCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-cccccccc-------
Q 018967 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAEW------- 239 (348)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~~i~~~~~------- 239 (348)
+.|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+++++|+++||.||+ |++.....
T Consensus 422 g~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 495 (589)
T 2pgn_A 422 AEGILGCGFPMALGAQLAE----PNSRVFLGTGDGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTLMNHQFGQN 495 (589)
T ss_dssp TTCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHHSSC
T ss_pred CcchhhhHHHHHHHHHHhC----CCCcEEEEEeeHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHHHHhhcCCC
Confidence 4699999999999999985 57889999999999886 5889999999999876666665 88765321
Q ss_pred --cccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCC
Q 018967 240 --RAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHS 297 (348)
Q Consensus 240 --~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs 297 (348)
.....+||.+. +||+++++|+. +.++.+++++|++ .+||+|||+.|+|.....
T Consensus 496 ~~~~~~~~d~~~~a~a~G~~~~~v~~--~~el~~al~~a~~---~~gp~liev~~~~~~~~~ 552 (589)
T 2pgn_A 496 NWTEFMNPDWVGIAKAFGAYGESVRE--TGDIAGALQRAID---SGKPALIEIPVSKTQGLA 552 (589)
T ss_dssp CSCBCCCCCHHHHHHHHTCEEEECTT--TCCHHHHHHHHHH---HCSCEEEEEECCSSSSTT
T ss_pred ccccCCCCCHHHHHHHCCCeEEEECC--HHHHHHHHHHHHh---CCCCEEEEEEecCCCCcC
Confidence 12234678774 59999999984 5688888888875 389999999999876543
No 33
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.54 E-value=6.3e-15 Score=154.85 Aligned_cols=118 Identities=25% Similarity=0.348 Sum_probs=94.2
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC-Ccccccccc------
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------ 239 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN-~~~i~~~~~------ 239 (348)
++.|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+++++|+++||.|| +|++.+...
T Consensus 510 g~~G~mG~~lpaAiGaalA~----p~~~Vv~i~GDGsf~~~--~~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~~~~~~~ 583 (677)
T 1t9b_A 510 GGLGTMGYGLPAAIGAQVAK----PESLVIDIDGDASFNMT--LTELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEH 583 (677)
T ss_dssp CSSCCTTCHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHHTCCCEEEEEECSSCHHHHHHHHHHSTT
T ss_pred CCcchhhchHHHHHHHHHhC----CCCeEEEEEeehHHhcc--HHHHHHHHHhCCCeEEEEEeCCCchhhhhhhhhhcCC
Confidence 44689999999999999995 78899999999999885 455999999999987665555 588755321
Q ss_pred c----ccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCC
Q 018967 240 R----AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHG 295 (348)
Q Consensus 240 ~----~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~G 295 (348)
+ ....+||.+. +||+++++|+ ++.++.+++++|++ .+||+|||+.|+|...
T Consensus 584 ~~~~~~~~~~d~~~la~a~G~~~~~v~--~~~el~~al~~a~~---~~gp~lIev~~~~~~~ 640 (677)
T 1t9b_A 584 RYSHTHQLNPDFIKLAEAMGLKGLRVK--KQEELDAKLKEFVS---TKGPVLLEVEVDKKVP 640 (677)
T ss_dssp CCCSCCCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHH---CSSCEEEEEEBCSSCC
T ss_pred CcccCcCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHH---CCCcEEEEEEecCCcc
Confidence 1 1134678775 5999999996 68899999988875 3899999999998654
No 34
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.53 E-value=1.3e-14 Score=148.61 Aligned_cols=116 Identities=21% Similarity=0.310 Sum_probs=90.5
Q ss_pred CCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC-Ccccccccc-------
Q 018967 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------- 239 (348)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN-~~~i~~~~~------- 239 (348)
+.|++|+++|.|+|+++|. +++.|||++|||+++++ .++|++|+++++|+++||.|| +|++.+...
T Consensus 404 ~~g~mG~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~~~~~~~~~~ 477 (549)
T 3eya_A 404 NHGSMANAMPQALGAQATE----PERQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYLT 477 (549)
T ss_dssp TTCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC-----------
T ss_pred CCchhhhHHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHHHHHhcCCCC
Confidence 5689999999999999985 57889999999999876 567999999999977665555 588743211
Q ss_pred --cccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCC
Q 018967 240 --RAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYH 294 (348)
Q Consensus 240 --~~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~ 294 (348)
.....+||.+. +||+++++|+ ++.++.+++++|++ .+||+|||+.|.+..
T Consensus 478 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~---~~gp~liev~~~~~~ 531 (549)
T 3eya_A 478 DGTELHDTNFARIAEACGITGIRVE--KASEVDEALQRAFS---IDGPVLVDVVVAKEE 531 (549)
T ss_dssp -CCBCCCCCHHHHHHHTTSEEEEEC--SGGGHHHHHHHHHH---SSSCEEEEEEBCCCC
T ss_pred cCCcCCCCCHHHHHHHcCCcEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEEecccc
Confidence 11234578774 5999999996 57788889988875 389999999998743
No 35
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.52 E-value=1.5e-14 Score=148.71 Aligned_cols=116 Identities=18% Similarity=0.124 Sum_probs=90.1
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEe-cCCcccccccc---c--
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEW---R-- 240 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~-NN~~~i~~~~~---~-- 240 (348)
++.|.+|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+++++|+++||. ||+|++..... .
T Consensus 422 ~~~g~mG~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 495 (570)
T 2vbf_A 422 PLWGSIGYTFPAALGSQIAD----KESRHLLFIGDGSLQLT--VQELGLSIREKLNPICFIINNDGYTVEREIHGPTQSY 495 (570)
T ss_dssp TTTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred ccchhhhhhHHHHHHHHHhC----CCCcEEEEEcchhhhcC--HHHHHHHHHcCCCCEEEEEECCchHHHHHHhccCCCc
Confidence 45799999999999999995 57899999999999885 5669999999999776655 55688765321 1
Q ss_pred -ccCCchHHhh--cCCcc-----eEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 241 -AAKSPSYYKR--GDYVP-----GLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 241 -~~~~~~~~~~--g~gip-----g~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
....+||.+. +||++ +++|+ ++.++.++++++.. ..+||+|||+.|+|
T Consensus 496 ~~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~~--~~~~p~liev~~~~ 551 (570)
T 2vbf_A 496 NDIPMWNYSKLPETFGATEDRVVSKIVR--TENEFVSVMKEAQA--DVNRMYWIELVLEK 551 (570)
T ss_dssp GCCCCCCGGGHHHHTTCCTTTEEEEEEC--BHHHHHHHHHHHHH--CTTSEEEEEEECCT
T ss_pred cCCCCCCHHHHHHHcCCCcCCcceEEec--CHHHHHHHHHHHHh--cCCCcEEEEEEcCc
Confidence 1234577774 59998 78996 58888888887521 13899999999986
No 36
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.52 E-value=9.8e-15 Score=150.01 Aligned_cols=116 Identities=22% Similarity=0.279 Sum_probs=92.0
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEe-cCCccccccccc----c
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEWR----A 241 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~-NN~~~i~~~~~~----~ 241 (348)
++.|.+|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+.+++|+++||. ||+|++...... .
T Consensus 406 ~~~g~mG~~l~~A~G~ala~----~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 479 (566)
T 2vbi_A 406 MQWGHIGWSVPSAFGNAMGS----QDRQHVVMVGDGSFQLT--AQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNY 479 (566)
T ss_dssp TTTCCTTTHHHHHHHHHHTC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGC
T ss_pred CcccchhhHHHHHHHHHHhC----CCCcEEEEEcchHHHhh--HHHHHHHHHhCCCcEEEEEECCcceEEEeeccCCccC
Confidence 35799999999999999985 57899999999999885 4669999999999765555 556888664321 1
Q ss_pred cCCchHHhh--cCCc-----ceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 242 AKSPSYYKR--GDYV-----PGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 242 ~~~~~~~~~--g~gi-----pg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
...+||.+. +||+ ++++|+ ++.++.+++++|++. .+||+|||+.|+|
T Consensus 480 ~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~~~--~~gp~liev~~~~ 533 (566)
T 2vbi_A 480 IKNWDYAGLMEVFNAGEGHGLGLKAT--TPKELTEAIARAKAN--TRGPTLIECQIDR 533 (566)
T ss_dssp CCCCCTTTHHHHHHTTTCCCEEEEEC--SHHHHHHHHHHHHHC--CSSCEEEEEECCT
T ss_pred CCCCCHHHHHHHcCCCCCCccEEEeC--CHHHHHHHHHHHHhc--CCCcEEEEEEeCc
Confidence 233567664 4888 999997 688999999988862 1899999999986
No 37
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.52 E-value=9.5e-15 Score=149.50 Aligned_cols=115 Identities=17% Similarity=0.121 Sum_probs=90.2
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC-Ccccccccc------
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------ 239 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN-~~~i~~~~~------ 239 (348)
++.|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+++++|+++||.|| +|++.+...
T Consensus 405 ~~~g~mG~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 478 (552)
T 1ovm_A 405 PLWGSIGYTLAAAFGAQTAC----PNRRVIVLTGDGAAQLT--IQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRY 478 (552)
T ss_dssp TTTCCTTHHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--TTHHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred hhhHhhhhHHHHHHHHHHhC----CCCcEEEEECchHHHhH--HHHHHHHHHhCCCCEEEEEECCCCeEEEeeccCCCCc
Confidence 35799999999999999985 57889999999999875 566999999999987666555 588764321
Q ss_pred cccCCchHHhh--cCCc----ceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 240 RAAKSPSYYKR--GDYV----PGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 240 ~~~~~~~~~~~--g~gi----pg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
.....+||.+. +||+ ++++|+ ++.++.+++++|++ .+||+|||+.|++
T Consensus 479 ~~~~~~d~~~~a~a~G~~~~~~~~~v~--~~~~l~~al~~a~~---~~gp~liev~~~~ 532 (552)
T 1ovm_A 479 NDIALWNWTHIPQALSLDPQSECWRVS--EAEQLADVLEKVAH---HERLSLIEVMLPK 532 (552)
T ss_dssp GCCCCCCGGGSTTTSCSSCCEEEEEEC--BHHHHHHHHHHHTT---CSSEEEEEEECCT
T ss_pred ccCCCCCHHHHHHHhCCCcCCCEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEEcCc
Confidence 11234577774 5899 899997 57788888877653 3899999999975
No 38
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.51 E-value=1.9e-14 Score=148.00 Aligned_cols=116 Identities=22% Similarity=0.253 Sum_probs=92.4
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEE-ecCCccccccccc----c
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEWR----A 241 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv-~NN~~~i~~~~~~----~ 241 (348)
++.|.+|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+++++|+++|| +||+|++...... .
T Consensus 410 ~~~g~~G~~l~~A~G~ala~----~~~~vv~i~GDGs~~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 483 (568)
T 2wvg_A 410 MQWGHIGWSVPAAFGYAVGA----PERRNILMVGDGSFQLT--AQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNN 483 (568)
T ss_dssp TTTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGC
T ss_pred CCcchhhhHHHHHHHHHHhC----CCCcEEEEEcChhHhcc--HHHHHHHHHcCCCcEEEEEECCcceEeeeeccCCCcC
Confidence 35789999999999999995 57899999999999884 556999999999976555 5556888664321 1
Q ss_pred cCCchHHhh--cCCc---------ceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 242 AKSPSYYKR--GDYV---------PGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 242 ~~~~~~~~~--g~gi---------pg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
....||.+. +||+ ++++|+ +..++.+++++|++. .+||+|||+.|+|
T Consensus 484 ~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~--~~~el~~al~~a~~~--~~gp~liev~~~~ 541 (568)
T 2wvg_A 484 IKNWDYAGLMEVFNGNGGYDSGAGKGLKAK--TGGELAEAIKVALAN--TDGPTLIECFIGR 541 (568)
T ss_dssp CCCCCHHHHHHHHHCTTSSSCCCCEEEEES--BHHHHHHHHHHHHHC--CSSCEEEEEECCT
T ss_pred CCCCCHHHHHHHhCCCcccccCCcceEEeC--CHHHHHHHHHHHHhc--CCCcEEEEEEcCc
Confidence 234577764 4888 889996 588999999998863 2899999999986
No 39
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.49 E-value=1.8e-14 Score=148.20 Aligned_cols=114 Identities=19% Similarity=0.151 Sum_probs=90.9
Q ss_pred CCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC-Ccccccccc-----cc
Q 018967 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW-----RA 241 (348)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN-~~~i~~~~~-----~~ 241 (348)
+.|.+|+++|.|+|+|+|. +++.|||++|||++++ ..++|++|+++++|+++||.|| +|++..... ..
T Consensus 420 ~~g~mG~~l~~A~G~ala~----~~~~vv~i~GDG~~~~--~~~~l~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 493 (565)
T 2nxw_A 420 YYAGMGFGVPAGIGAQCVS----GGKRILTVVGDGAFQM--TGWELGNCRRLGIDPIVILFNNASWEMLRTFQPESAFND 493 (565)
T ss_dssp TTCCTTCHHHHHHHHHHHT----TTCCEEEEEEHHHHHH--HGGGGGGHHHHTCCCEEEEEECSBCHHHHHHCTTCGGGB
T ss_pred ccccccccchHHHHHHHhC----CCCcEEEEEechHHHh--hHHHHHHHHHhCCCCEEEEEECCCCcEEeeecccCCCCc
Confidence 3689999999999999996 5788999999999985 4677999999999977666555 588754321 12
Q ss_pred cCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCE-EEEEEEec
Q 018967 242 AKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPM-ILEMDTYR 292 (348)
Q Consensus 242 ~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~-lIe~~t~R 292 (348)
...+||.+. +||+++++|+ +++++.+++++|++ .+||+ |||+.|+|
T Consensus 494 ~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~---~~gp~~liev~~~~ 542 (565)
T 2nxw_A 494 LDDWRFADMAAGMGGDGVRVR--TRAELKAALDKAFA---TRGRFQLIEAMIPR 542 (565)
T ss_dssp CCCCCHHHHTGGGTSEEEEEC--BHHHHHHHHHHHHH---CCSSCEEEEEECCT
T ss_pred CCCCCHHHHHHHcCCCEEEeC--CHHHHHHHHHHHHh---cCCCeEEEEEEccc
Confidence 234678774 5999999997 57899999988875 37898 99999975
No 40
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.49 E-value=6.3e-14 Score=144.03 Aligned_cols=115 Identities=17% Similarity=0.122 Sum_probs=91.8
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-c-cccccc---cc-
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-Y-GMGTAE---WR- 240 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~-~i~~~~---~~- 240 (348)
+..|++|+++|.|+|+|+| +++.|||++|||++++. .++|++|+++++|+++||.||+ | .+.... ..
T Consensus 423 g~~g~~G~~l~~AiGaala-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 495 (568)
T 2c31_A 423 GTWGVMGIGMGYCVAAAAV-----TGKPVIAVEGDSAFGFS--GMELETICRYNLPVTVIIMNNGGIYKGNEADPQPGVI 495 (568)
T ss_dssp TTTTCSSCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEESSBSSCSCCCCSBTTBC
T ss_pred CCCccccccHHHHHHHHhC-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHhhcCCc
Confidence 4568999999999999998 57889999999999874 5669999999999988887776 4 432211 00
Q ss_pred ---ccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecC
Q 018967 241 ---AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (348)
Q Consensus 241 ---~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~ 293 (348)
....+||.+. +||+++++|+ ++.++.+++++|++ .+||+|||+.|+|.
T Consensus 496 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~---~~~p~liev~~~~~ 548 (568)
T 2c31_A 496 SCTRLTRGRYDMMMEAFGGKGYVAN--TPAELKAALEEAVA---SGKPCLINAMIDPD 548 (568)
T ss_dssp CTTBCCCCCHHHHHHTTTCEEEEES--SHHHHHHHHHHHHH---HTSCEEEEEEBCTT
T ss_pred ccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEEeccc
Confidence 0234688875 5999999996 68899999998875 38999999999874
No 41
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.47 E-value=1.3e-13 Score=141.45 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=91.5
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-c-cccccc----cc
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-Y-GMGTAE----WR 240 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~-~i~~~~----~~ 240 (348)
+..|++|+++|.|+|+|+| +++.|||++|||++++. .++|++|+++++|+++||.||+ | ++.... .+
T Consensus 418 g~~g~~G~~l~~AiGaa~a-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 490 (564)
T 2q28_A 418 GTWGVMGIGMGYAIGASVT-----SGSPVVAIEGDSAFGFS--GMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGA 490 (564)
T ss_dssp TTTTCTTCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEECSBSSCSCCCCTTSSCC
T ss_pred CCCCcccchHHHHHHHhhc-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHHhccCC
Confidence 4579999999999999998 57889999999999874 3669999999999887777776 4 442211 00
Q ss_pred -----ccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCC
Q 018967 241 -----AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYH 294 (348)
Q Consensus 241 -----~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~ 294 (348)
....+||.+. +||+++++|+ ++.++.+++++|++ .++|+|||+.|.|..
T Consensus 491 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~---~~~p~liev~~~~~~ 546 (564)
T 2q28_A 491 PSPTDLLHHARYDKLMDAFRGVGYNVT--TTDELRHALTTGIQ---SRKPTIINVVIDPAA 546 (564)
T ss_dssp CCTTBCCTTCCGGGGGGGGTCEEEEEC--SHHHHHHHHHHHHH---HTSCEEEEEEBCTTS
T ss_pred ccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEEecccc
Confidence 1124577774 5999999996 68899999998875 389999999998754
No 42
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.45 E-value=4.8e-14 Score=144.67 Aligned_cols=113 Identities=19% Similarity=0.159 Sum_probs=83.0
Q ss_pred CCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-ccccccc-------
Q 018967 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAE------- 238 (348)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~~i~~~~------- 238 (348)
+..|++|. +|.|+|+++| +++.|||++|||++.+. .++|++|+++++|+++||.||+ |++....
T Consensus 414 g~~g~~G~-l~~A~Gaa~a-----~~~~vv~i~GDGsf~~~--~~eL~ta~~~~lpv~ivv~NN~~~~~~~~~~~~~~~~ 485 (556)
T 3hww_A 414 GASGIDGL-LSTAAGVQRA-----SGKPTLAIVGDLSALYD--LNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSER 485 (556)
T ss_dssp SSCCSSSH-HHHHHHHHHH-----HCCCEEEEEEHHHHHHT--GGGHHHHTTCSSCEEEEEEESCC--------------
T ss_pred cccccccH-HHHHHHHHhc-----CCCcEEEEEccHHhhhc--chhhHhhcccCCCcEEEEEECCCCCcccCCCCcchhH
Confidence 34677777 9999999998 36789999999999875 3459999999999988887777 5664321
Q ss_pred cc---ccCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 239 WR---AAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 239 ~~---~~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
+. ....+||.+. +||+++++|+ +++++.+++++|++ .+||+|||+.|.+
T Consensus 486 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~---~~gp~liev~~~~ 539 (556)
T 3hww_A 486 ERFYLMPQNVHFEHAAAMFELKYHRPQ--NWQELETAFADAWR---TPTTTVIEMVVND 539 (556)
T ss_dssp ---CCCCCCCCSHHHHHHTTCEEECCS--SHHHHHHHHHHHTT---SSSEEEEEEECCS
T ss_pred HHhccCCCCCCHHHHHHHcCCcEEecC--CHHHHHHHHHHHHh---CCCCEEEEEECCc
Confidence 11 1234678774 5999999997 56788888777654 2899999999864
No 43
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.43 E-value=4.8e-13 Score=142.06 Aligned_cols=139 Identities=18% Similarity=0.196 Sum_probs=111.8
Q ss_pred cCCCCCCCCccCCCccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchh---HHHHHHHHHHCCCC-eEEEEecCC
Q 018967 156 MHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQ---LFEALNIAALWDLP-AILVCENNH 231 (348)
Q Consensus 156 ~h~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~---~~Ealn~Aa~~~LP-vI~Vv~NN~ 231 (348)
.|....-.|+...+|+||++++.|+|+|+ .+++..|+|++|||+.++|. .||+.+++..+++. +|.|+++|+
T Consensus 161 gHp~~~tpGve~~tG~LGqGls~AvG~A~----~~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~~~l~nl~~i~D~N~ 236 (845)
T 3ahc_A 161 SHFAPETPGSIHEGGELGYALSHAYGAVM----NNPSLFVPCIIGDGEAETGPLATGWQSNKLVNPRTDGIVLPILHLNG 236 (845)
T ss_dssp SSCCTTSTTCSCCCSSTTCHHHHHHHHHT----TCTTCEEEEEEETTGGGSHHHHHHGGGGGSCCTTTSCEEEEEEEECS
T ss_pred CCCCCCCCCeecCCCCccchHhHHhhhhh----cCCCCeEEEEECCCchhhhcchhhhHHhhhhhhhcCCCEEEEEECCC
Confidence 46543334788889999999999999994 46889999999999999999 99999999999998 668889999
Q ss_pred ccccccccccc-CCchHHh--hcCCcceE-EEcC-C--CHHHHHHHHHHHHHH-----------hcc---CCC--EEEEE
Q 018967 232 YGMGTAEWRAA-KSPSYYK--RGDYVPGL-KVDG-M--DALAVKQACKFAKEH-----------ALK---NGP--MILEM 288 (348)
Q Consensus 232 ~~i~~~~~~~~-~~~~~~~--~g~gipg~-~VDG-~--D~~av~~a~~~A~~~-----------ar~---~gP--~lIe~ 288 (348)
+.|..+..... ...++.+ +|||...+ .||| + |+.++.+++.+|++. +|+ ++| ++|.+
T Consensus 237 ~~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w~~Ii~ 316 (845)
T 3ahc_A 237 YKIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFYPMLIF 316 (845)
T ss_dssp BSSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCEEEEEE
T ss_pred CcCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCeEEEE
Confidence 99987765322 2334544 36887778 8999 9 999999988766632 332 579 99999
Q ss_pred EEecCC-------CCCC
Q 018967 289 DTYRYH-------GHSM 298 (348)
Q Consensus 289 ~t~R~~-------GHs~ 298 (348)
+|.+++ |..+
T Consensus 317 rT~kG~tgp~~~~G~~~ 333 (845)
T 3ahc_A 317 RTPKGWTCPKFIDGKKT 333 (845)
T ss_dssp ECCTTTTSCSEETTEEC
T ss_pred ECcccCCCCCCCCCccc
Confidence 999999 8854
No 44
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.41 E-value=6.2e-14 Score=145.24 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=85.6
Q ss_pred CccccchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEe-cCCcccccccc--------
Q 018967 169 HGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEW-------- 239 (348)
Q Consensus 169 ~g~lG~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~-NN~~~i~~~~~-------- 239 (348)
.+.+|+++|.|+|+|+|. ++.|||++|||+++++ .++|++|+++++|+++||. ||+|++.....
T Consensus 454 ~~~ig~~l~~AiGaala~-----~~~vv~i~GDGsf~~~--~~eL~ta~~~~lp~~ivv~NN~~~~i~~~~~~~q~~~~~ 526 (604)
T 2x7j_A 454 ANGIDGVVSSAMGVCEGT-----KAPVTLVIGDLSFYHD--LNGLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTHF 526 (604)
T ss_dssp TCCSSSHHHHHHHHHHHH-----TSCEEEEEEHHHHHHT--GGGGHHHHHHCCCEEEEEEECSSCGGGGGSGGGSCHHHH
T ss_pred cCCcCcHHHHHHHHHhcC-----CCcEEEEEccHHHHhH--HHHHHHhhhcCCCeEEEEEeCCCCcccccCCCCccchhh
Confidence 467899999999999993 6789999999999886 3559999999999876665 55688744211
Q ss_pred -cc---cCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 240 -RA---AKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 240 -~~---~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
+. ...+||.+. +||+++++|+ +++++.+++++|++ .+||+|||+.|.|
T Consensus 527 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~---~~gp~liev~~~~ 580 (604)
T 2x7j_A 527 EDLFGTPTGLDFKHAAALYGGTYSCPA--SWDEFKTAYAPQAD---KPGLHLIEIKTDR 580 (604)
T ss_dssp HHHTTCCCCCCTHHHHHHTTCEEECCS--SHHHHHHHCCCCCS---SCCEEEEEEECCH
T ss_pred HhhccCCCCCCHHHHHHHcCCeEEecC--CHHHHHHHHHHHHh---CCCCEEEEEECCc
Confidence 11 123577774 5999999997 57787777766553 2899999999864
No 45
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.34 E-value=4.3e-13 Score=138.22 Aligned_cols=107 Identities=17% Similarity=0.094 Sum_probs=75.2
Q ss_pred cchhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC-ccccccc---c------cc-
Q 018967 173 GAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAE---W------RA- 241 (348)
Q Consensus 173 G~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~~i~~~~---~------~~- 241 (348)
|+++|.|+|+|+ +++.|||++|||++++. .++|++|+++++|+++||.||+ |++.... . +.
T Consensus 439 ~g~l~~AiGaa~------~~~~vv~i~GDGsf~~~--~~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~~~~~~~~~~~~ 510 (578)
T 3lq1_A 439 DGVVSSALGASV------VFQPMFLLIGDLSFYHD--MNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLF 510 (578)
T ss_dssp SSHHHHHHHHTT------TSSSEEEEEEHHHHHHT--GGGGHHHHHTTCCEEEEEECCC---------------------
T ss_pred ccHHHHHHHHhc------CCCCEEEEEchHHHHhh--HHHHHhhccCCCCeEEEEEECCcCccccccccccccchhhhhc
Confidence 347999999863 47889999999999875 4569999999999887777774 7875421 0 00
Q ss_pred --cCCchHHhh--cCCcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEec
Q 018967 242 --AKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (348)
Q Consensus 242 --~~~~~~~~~--g~gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (348)
...+||.+. +||+++++|+ +++++.+++++|++ .+||+|||+.|.+
T Consensus 511 ~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~---~~gp~liev~~~~ 560 (578)
T 3lq1_A 511 GTSTELDFRFAAAFYDADYHEAK--SVDELEEAIDKASY---HKGLDIIEVKTNR 560 (578)
T ss_dssp ----CCCTHHHHHHTTCEEEECC--SHHHHHHHHHHHTT---SSSEEEEEEC---
T ss_pred cCCCCCCHHHHHHHcCCceEecC--CHHHHHHHHHHHHh---CCCCEEEEEECCc
Confidence 123577774 5999999996 67888888887764 3899999998865
No 46
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=98.82 E-value=1.6e-08 Score=112.29 Aligned_cols=97 Identities=11% Similarity=0.038 Sum_probs=73.3
Q ss_pred CcEEEEEeCCc-cccchhHHHHHHHHHHCCCCeEEEEecCC-cccccccccc----------------cCCchHHhh--c
Q 018967 192 ETVTFALYGDG-AANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAEWRA----------------AKSPSYYKR--G 251 (348)
Q Consensus 192 ~~~vv~~~GDG-a~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~-~~i~~~~~~~----------------~~~~~~~~~--g 251 (348)
++.||++.||| ++.+| + ..|.+|..+++|+++||.||+ |++...+... ...+||.+. +
T Consensus 953 ~~~Vv~i~GDG~~~~mg-~-~eL~ta~~~~~~v~iiVlnN~~yg~tg~Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA~a 1030 (1231)
T 2c42_A 953 KKSVWIFGGDGWAYDIG-Y-GGLDHVLASGEDVNVFVMDTEVYSNTGGQSSKATPTGAVAKFAAAGKRTGKKDLARMVMT 1030 (1231)
T ss_dssp CCEEEEEEEHHHHHTTT-H-HHHHHHHHTTCSCEEEEEECSSBTTTTCBCCTTSCTTCCBBTBTTCCSSCCCCHHHHHHT
T ss_pred CCcEEEEeCcHHHHHcc-h-HHHHHHHHhCCCeEEEEEECHHHHhHHhhhccCCCCCceeeecccCCCCCchhHHHHHHH
Confidence 47899999999 78887 3 359999999999987777777 6765422110 012577774 5
Q ss_pred CCcceEEE-cC-CCHHHHHHHHHHHHHHhccCCCEEEEEEEecC
Q 018967 252 DYVPGLKV-DG-MDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (348)
Q Consensus 252 ~gipg~~V-DG-~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~ 293 (348)
+|++++.+ .- .++.++.+++++|+++ +||+|||+.+.-.
T Consensus 1031 ~G~~~va~~~v~~~~~~l~~al~eAl~~---~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1031 YGYVYVATVSMGYSKQQFLKVLKEAESF---PGPSLVIAYATCI 1071 (1231)
T ss_dssp TSSSEEEEECTTTCHHHHHHHHHHHHHS---SSCEEEEEECCCG
T ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHhc---CCCEEEEEeecCc
Confidence 99999854 33 4899999999999974 9999999997544
No 47
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=91.18 E-value=0.95 Score=46.59 Aligned_cols=101 Identities=15% Similarity=0.193 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCc-ccccccccccCCchHHhhcCCc
Q 018967 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHY-GMGTAEWRAAKSPSYYKRGDYV 254 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~-~i~~~~~~~~~~~~~~~~g~gi 254 (348)
+.+|+|+|++ .-++++.++++... =.+.+.++.++..++|+++++.+.++ +-..+. .....|+.-. -.+
T Consensus 374 ~~~a~G~A~~-----G~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~~g~~G~t--H~~~~d~~~~-~~i 443 (621)
T 2o1s_A 374 VTFAAGLAIG-----GYKPIVAIYSTFLQ--RAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQT--HQGAFDLSYL-RCI 443 (621)
T ss_dssp HHHHHHHHHT-----TCEEEEEEETTGGG--GGHHHHHHTTTTTTCCCEEEEESCBCCCTTCGG--GCBCSHHHHT-TTS
T ss_pred HHHHHHHHHC-----CCEEEEEehHhHHH--HHHHHHHHHHHhcCCCEEEEEECCccCCCCCCc--cCchHHHHHH-hcC
Confidence 4567777764 24677888888753 22334577788999999999977665 211121 1122343322 124
Q ss_pred ceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018967 255 PGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (348)
Q Consensus 255 pg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (348)
|++.| .=.|+.+++..++.|++. .++|++|-.
T Consensus 444 P~l~v~~P~d~~e~~~~l~~a~~~--~~~Pv~i~~ 476 (621)
T 2o1s_A 444 PEMVIMTPSDENECRQMLYTGYHY--NDGPSAVRY 476 (621)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHHC--CSSCEEEEC
T ss_pred CCCEEEecCCHHHHHHHHHHHHHc--CCCCEEEEe
Confidence 55433 556899999999999873 278998854
No 48
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=91.11 E-value=1.3 Score=45.53 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchHHhhcCCcc
Q 018967 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVP 255 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~~~~g~gip 255 (348)
+.+|+|+|++ +...++++.++++.. ..++.+.+++..++|+++++..-+++.+..........++.-.. .+|
T Consensus 368 v~~a~G~A~~----G~~~~~~~~f~~Fl~---~a~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH~~~ed~a~l~-~iP 439 (616)
T 3mos_A 368 VSIAVGCATR----NRTVPFCSTFAAFFT---RAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFR-SVP 439 (616)
T ss_dssp HHHHHHHHGG----GCCEEEEEEEGGGGG---GGHHHHHHHHHTTCCEEEEEESBSGGGCTTCGGGCBSSHHHHHH-TST
T ss_pred HHHHHHHHHc----CCCCEEEEehHHHHH---HHHHHHHHHHHhCCCeEEEEECCCccccCCCCcccCHHHHHHhc-CCC
Confidence 3455666654 333567778999874 35777888899999999988776664432111111223333221 367
Q ss_pred eEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018967 256 GLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (348)
Q Consensus 256 g~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (348)
++.| .=.|+.++..+++.|.+. ++|++|-.
T Consensus 440 ~l~V~~P~d~~e~~~~l~~a~~~---~gp~~ir~ 470 (616)
T 3mos_A 440 TSTVFYPSDGVATEKAVELAANT---KGICFIRT 470 (616)
T ss_dssp TEEEECCCSHHHHHHHHHHHHTC---CSEEEEEC
T ss_pred CCEEEecCCHHHHHHHHHHHHhc---CCCEEEEE
Confidence 6655 556888999998888753 89987643
No 49
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=89.95 E-value=2.2 Score=44.44 Aligned_cols=110 Identities=18% Similarity=0.154 Sum_probs=67.7
Q ss_pred Cccccch-hHHHHHHHHHHHhCC-CCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCch
Q 018967 169 HGIVGAQ-IPLGCGLAFAQKYSK-DETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPS 246 (348)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~-~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~ 246 (348)
.|+-.++ +++|+|+|+ .+ .-++++.++.+.+. ..++++..++..++|++|++...+++.+..........+
T Consensus 419 ~gIaE~~~v~~a~GlA~----~G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tHq~~ed 491 (675)
T 1itz_A 419 FGVREHGMGAICNGIAL----HSPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEH 491 (675)
T ss_dssp CCSCHHHHHHHHHHHHT----TCTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSH
T ss_pred ecccHHHHHHHHHHHHh----cCCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCcCcHHH
Confidence 3444333 346666664 33 24566666655543 356778889999999999997777764321111122233
Q ss_pred HHhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018967 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (348)
Q Consensus 247 ~~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (348)
+.-.. .+|++.| .=-|+.++..+++.|++. .++|++|-.
T Consensus 492 la~lr-~iP~l~V~~Pad~~e~~~~l~~a~~~--~~~Pv~i~~ 531 (675)
T 1itz_A 492 LVSFR-AMPNILMLRPADGNETAGAYKVAVLN--RKRPSILAL 531 (675)
T ss_dssp HHHHH-SSSSCEEECCCSHHHHHHHHHHHHHC--TTSCEEEEE
T ss_pred HHHhc-cCCCeEEEECCCHHHHHHHHHHHHHh--CCCcEEEEe
Confidence 33221 3666544 556899999999999873 289999854
No 50
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=89.66 E-value=2.1 Score=44.51 Aligned_cols=109 Identities=16% Similarity=0.168 Sum_probs=67.3
Q ss_pred Cccccch-hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchH
Q 018967 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSY 247 (348)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~ 247 (348)
.|+-.++ +++|+|+|+. +.-++++..+..-+. ..++++.+++..++|+++++...+++.+..........++
T Consensus 407 ~GIaE~~~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tHq~~edl 479 (669)
T 2r8o_A 407 YGVREFGMTAIANGISLH----GGFLPYTSTFLMFVE---YARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQV 479 (669)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---TTHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTCCSSHH
T ss_pred cchhHHHHHHHHHHHHHc----CCCeEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCCcCcCCCCCccCCHHHH
Confidence 3444443 3566777654 223556666655443 2356788899999999999988887644221111222343
Q ss_pred HhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018967 248 YKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (348)
Q Consensus 248 ~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (348)
.-.. .+|++.| .=-|+.++..+++.|++. .++|++|-
T Consensus 480 a~lr-~iP~l~V~~Pad~~E~~~~l~~a~~~--~~~Pv~i~ 517 (669)
T 2r8o_A 480 ASLR-VTPNMSTWRPCDQVESAVAWKYGVER--QDGPTALI 517 (669)
T ss_dssp HHHH-TSTTCEEECCSSHHHHHHHHHHHHHC--SSSCEEEE
T ss_pred HHhc-CCCCCEEEecCCHHHHHHHHHHHHHh--CCCcEEEE
Confidence 3321 2555544 556899999999999973 28999974
No 51
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=89.64 E-value=2.5 Score=42.98 Aligned_cols=104 Identities=16% Similarity=0.042 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHhhc-CCc
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKRG-DYV 254 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~~g-~gi 254 (348)
-+|.|.|.+ .+.-.+++|..|=|++|. .-++..|..-++|+|+|.-+-... ++....-+ ..|....+ +--
T Consensus 57 ~~A~GyAr~---tg~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~Q--~~d~~~~~~~tk 128 (589)
T 2pgn_A 57 WMVNGYNYV---KDRSAAVGAWHCVGNLLL---HAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQ--QVPWQSFTPIAR 128 (589)
T ss_dssp HHHHHHHHH---HTSCCEEEEEEGGGGGGC---HHHHHHHHHTTCCEEEEEEESCGGGTTCTTCSS--CCCGGGGTTTSS
T ss_pred HHHHHHHHH---HCCCEEEEEecCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCCCCccc--ccChhhccccEE
Confidence 346666654 355678999999999984 456778889999999998765532 21110001 11221111 112
Q ss_pred ceEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018967 255 PGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (348)
Q Consensus 255 pg~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (348)
....+ .+++++.+.+.+|+..+.. .||+.|++-.
T Consensus 129 ~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 164 (589)
T 2pgn_A 129 STQRV--ERLDKVGEAIHEAFRVAEGHPAGPAYVDIPF 164 (589)
T ss_dssp EEEEC--CSGGGHHHHHHHHHHHHTSSSCCEEEEEEET
T ss_pred EEeec--CCHHHHHHHHHHHHHHHhcCCCccEEEEeCH
Confidence 22444 4677888888888888776 4999998754
No 52
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=88.68 E-value=3 Score=43.38 Aligned_cols=109 Identities=17% Similarity=0.147 Sum_probs=68.7
Q ss_pred Cccccc-hhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchH
Q 018967 169 HGIVGA-QIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSY 247 (348)
Q Consensus 169 ~g~lG~-~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~ 247 (348)
.|+-.+ .+++|+|+|+. +.-++++..+.+-.. ..++++.+++..++|++|+....+++.+..........++
T Consensus 408 ~GIaE~~~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~THq~~ed~ 480 (663)
T 3kom_A 408 YGVREFGMAAIMNGLSLY----GGIKPYGGTFLVFSD---YSRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTHQPIEHV 480 (663)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGHH---HHHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTCCSSHH
T ss_pred cCccHHHHHHHHHHHHHc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCCcCCHHHH
Confidence 455555 34667888764 234566666665542 3467788899999999999887777644222112222333
Q ss_pred HhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018967 248 YKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (348)
Q Consensus 248 ~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (348)
+-.. .+|++.| -=.|+.++..+++.|++. .++|++|-
T Consensus 481 a~lr-~iPnl~V~~Pad~~e~~~~l~~A~~~--~~~Pv~ir 518 (663)
T 3kom_A 481 PSLR-LIPNLSVWRPADTIETMIAWKEAVKS--KDTPSVMV 518 (663)
T ss_dssp HHHH-TSTTCEEECCCSHHHHHHHHHHHHHC--SSCCEEEE
T ss_pred HHHh-cCCCcEEEeeCCHHHHHHHHHHHHHh--CCCCEEEE
Confidence 3211 3566544 445888999999999862 28999884
No 53
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=88.56 E-value=1.1 Score=46.16 Aligned_cols=101 Identities=19% Similarity=0.263 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCc-ccccccccccCCchHHhhcCCc
Q 018967 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHY-GMGTAEWRAAKSPSYYKRGDYV 254 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~-~i~~~~~~~~~~~~~~~~g~gi 254 (348)
+.+|+|+|++ .-++++.++.+.. +=.+...++.++..++|+++++.+.++ +-..+. .....|..-. -.+
T Consensus 377 ~~~a~G~A~~-----G~rp~~~~~~~F~--~~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~t--H~~~~d~a~~-r~i 446 (629)
T 2o1x_A 377 VTTAAGMALQ-----GMRPVVAIYSTFL--QRAYDQVLHDVAIEHLNVTFCIDRAGIVGADGAT--HNGVFDLSFL-RSI 446 (629)
T ss_dssp HHHHHHHHHT-----TCEEEEEEEHHHH--GGGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTT--TCBCSHHHHT-TTS
T ss_pred HHHHHHHHHc-----CCEEEEEecHHHH--HHHHHHHHHHHhhcCCCEEEEEECCccCCCCCcc--cCccHHHHHH-Hcc
Confidence 4567777764 2466777777654 222334567788999999999977665 211111 1112333221 125
Q ss_pred ceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEEE
Q 018967 255 PGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMD 289 (348)
Q Consensus 255 pg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~~ 289 (348)
|++.| .=.|+.+++..++.|++. ++|++|-..
T Consensus 447 P~l~v~~P~d~~e~~~~~~~a~~~---~~Pv~i~~~ 479 (629)
T 2o1x_A 447 PGVRIGLPKDAAELRGMLKYAQTH---DGPFAIRYP 479 (629)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHHS---SSCEEEECC
T ss_pred CCcEEEecCCHHHHHHHHHHHHhC---CCCEEEEec
Confidence 55443 556899999999999974 899988553
No 54
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=88.22 E-value=1.4 Score=44.85 Aligned_cols=103 Identities=20% Similarity=0.174 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHhh--cCC
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDY 253 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~~--g~g 253 (348)
-+|.|.|.+. ++-.+++|..|=|++|. .-++..|...++|+|+|+-+-... ++.. .....|.... .+-
T Consensus 64 ~~A~Gyar~t---g~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~g~~---~~Q~~d~~~~~~~~~ 134 (590)
T 1ybh_A 64 FAAEGYARSS---GKPGICIATSGPGATNL---VSGLADALLDSVPLVAITGQVPRRMIGTD---AFQETPIVEVTRSIT 134 (590)
T ss_dssp HHHHHHHHHH---SSCEEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTTT---CTTCCCHHHHHGGGS
T ss_pred HHHHHHHHHH---CCCEEEEeccCchHHHH---HHHHHHHHhhCCCEEEEeCcCCccccCCC---cccccCHHHHHHHHh
Confidence 4566766553 45567778888888873 456777888899999988665432 1110 0111122221 121
Q ss_pred cceEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018967 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (348)
Q Consensus 254 ipg~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (348)
-....| .+++++.+.+++|+..+++ .||+.|++-.
T Consensus 135 k~~~~v--~~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~ 171 (590)
T 1ybh_A 135 KHNYLV--MDVEDIPRIIEEAFFLATSGRPGPVLVDVPK 171 (590)
T ss_dssp SEEEEC--CCGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred CeEEec--CCHHHHHHHHHHHHHHHhhCCCceEEEEeCc
Confidence 222344 4677899999999988776 5899998854
No 55
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=87.97 E-value=2.6 Score=43.60 Aligned_cols=109 Identities=16% Similarity=0.079 Sum_probs=68.4
Q ss_pred Cccccch-hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchH
Q 018967 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSY 247 (348)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~ 247 (348)
.|+-.++ +.+|+|+|+. +.-++++..+.+=. + ..++.+.+++..++|++|+....+++.+.......+..++
T Consensus 387 ~GIaE~~~v~~a~GlA~~----gG~~P~~~~f~~F~--~-~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~THq~~ed~ 459 (632)
T 3l84_A 387 FGIREHAMAAINNAFARY----GIFLPFSATFFIFS--E-YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIEQL 459 (632)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGH--H-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGSCSSHH
T ss_pred eCccHHHHHHHHHHHHHc----CCCEEEEEecHHHH--H-HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCCCCHhHH
Confidence 4555544 3667787765 22355666665433 2 3567788889999999999887777644222222223343
Q ss_pred HhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018967 248 YKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (348)
Q Consensus 248 ~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (348)
+-.. .+|++.| -=-|+.++..+++.|++ .++|++|-.
T Consensus 460 a~lr-~iP~l~V~~P~d~~e~~~~l~~A~~---~~~Pv~ir~ 497 (632)
T 3l84_A 460 STFR-AMPNFLTFRPADGVENVKAWQIALN---ADIPSAFVL 497 (632)
T ss_dssp HHHH-HSSSCEEECCSSHHHHHHHHHHHHH---CSSCEEEEC
T ss_pred HHHh-cCCCCEEEecCCHHHHHHHHHHHHh---CCCCEEEEE
Confidence 3211 2565544 44588999999999987 489998753
No 56
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=87.96 E-value=2.7 Score=43.48 Aligned_cols=110 Identities=19% Similarity=0.170 Sum_probs=67.8
Q ss_pred Cccccch-hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchH
Q 018967 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSY 247 (348)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~ 247 (348)
.|+-.++ +++|+|+|+. +.-++++..+.-.+. -.++++.+++..++|+++++.+.+++.+..........|+
T Consensus 402 ~gIaE~~~~~~a~GlA~~----Gg~~P~~~t~~~F~~---~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tHq~~edl 474 (651)
T 2e6k_A 402 FGVREHAMGAILNGLNLH----GGYRAYGGTFLVFSD---YMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTHQPVEHL 474 (651)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---GSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSHH
T ss_pred cCcCHHHHHHHHHHHHHc----CCCEEEEEeHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCcCccccHHHH
Confidence 3444333 3567777765 223566666633332 2456788899999999999988887654222111222343
Q ss_pred HhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018967 248 YKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (348)
Q Consensus 248 ~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (348)
.-.. .+|++.| .=.|+.++..+++.|++. .++|++|-.
T Consensus 475 a~lr-~iP~l~V~~Pad~~E~~~~l~~A~~~--~~~Pv~i~~ 513 (651)
T 2e6k_A 475 MSLR-AMPNLFVIRPADAYETFYAWLVALRR--KEGPTALVL 513 (651)
T ss_dssp HHHH-TSTTCEEECCSSHHHHHHHHHHHHHC--CSSCEEEEC
T ss_pred HHhc-CCCCcEEEecCCHHHHHHHHHHHHHc--CCCCEEEEE
Confidence 3321 2555443 556899999999999873 278998865
No 57
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=87.91 E-value=3 Score=43.78 Aligned_cols=108 Identities=19% Similarity=0.192 Sum_probs=67.4
Q ss_pred Cccccch-hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchH
Q 018967 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSY 247 (348)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~ 247 (348)
.|+-.++ +.+|+|+|+. +.-++++.++. .|.+ ..+..+.+++..++|++|+....+++.+.......+..++
T Consensus 453 ~GIaE~~mv~~AaGlA~~----~G~~Pv~~~f~--~F~~-~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~THq~~ed~ 525 (711)
T 3uk1_A 453 YGVREFGMSAAINGLVLH----GGYKPFGGTFL--TFSD-YSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTHQSVEHV 525 (711)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEG--GGHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSHH
T ss_pred eCccHHHHHHHHHHHHHc----CCCEEEEEEhH--HHHH-HHHHHHHHhhhcCCCEEEEEECCCcCcCCCCCccCChhHH
Confidence 4555554 4677888863 12345555553 2332 3456788889999999999987776544221112222333
Q ss_pred HhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018967 248 YKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (348)
Q Consensus 248 ~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (348)
+-. -.+|++.| .=-|+.++..+++.|++ .++|++|-
T Consensus 526 a~l-r~iPnl~V~~Pad~~E~~~~l~~Ai~---~~~Pv~ir 562 (711)
T 3uk1_A 526 ASL-RLIPNLDVWRPADTVETAVAWTYAVA---HQHPSCLI 562 (711)
T ss_dssp HHH-HTSTTCEEECCSSHHHHHHHHHHHHH---SSSCEEEE
T ss_pred HHH-hcCCCCEEEecCCHHHHHHHHHHHHh---cCCCEEEE
Confidence 321 13666544 45688999999999987 48999884
No 58
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=87.62 E-value=2.5 Score=44.06 Aligned_cols=109 Identities=19% Similarity=0.179 Sum_probs=66.6
Q ss_pred Cccccchh-HHHHHHHHHHHhCCCCc-EEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCch
Q 018967 169 HGIVGAQI-PLGCGLAFAQKYSKDET-VTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPS 246 (348)
Q Consensus 169 ~g~lG~~l-p~A~G~A~A~k~~~~~~-~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~ 246 (348)
.|+-.+++ ++|+|+|+. +.-+ +++..+.+-+. ..++++.+++..++|++|++...+++.+.......+..+
T Consensus 414 ~gIaE~~~vg~a~GlA~~----Gg~~~P~~~~f~~F~~---~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tHq~~ed 486 (680)
T 1gpu_A 414 YGIREHAMGAIMNGISAF----GANYKPYGGTFLNFVS---YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTHQPIET 486 (680)
T ss_dssp CCSCHHHHHHHHHHHHHH----CTTCEEEEEEEHHHHG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSH
T ss_pred CCccHHHHHHHHHHHHhc----CCCceEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCccCCHHH
Confidence 45444443 567777764 3225 56666543332 235668889999999999987777764421111122233
Q ss_pred HHhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018967 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (348)
Q Consensus 247 ~~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (348)
++-.. .+|++.| -=-|+.++..+++.|++. .++|++|-
T Consensus 487 la~lr-~iP~l~V~~Pad~~e~~~~l~~A~~~--~~~Pv~i~ 525 (680)
T 1gpu_A 487 LAHFR-SLPNIQVWRPADGNEVSAAYKNSLES--KHTPSIIA 525 (680)
T ss_dssp HHHHH-TSSSCEEECCCSHHHHHHHHHHHHHC--SSCCEEEE
T ss_pred HHHhc-CCCCCEEEecCCHHHHHHHHHHHHHh--CCCcEEEE
Confidence 33221 3566544 446899999999999873 28999984
No 59
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=87.52 E-value=1.6 Score=43.87 Aligned_cols=102 Identities=13% Similarity=0.023 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHhh-c-CC
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR-G-DY 253 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~~-g-~g 253 (348)
-+|.|.|.+ .+.-.+++|..|=|++|. .-++..|..-+.|+|+|+-+-... ++.. ..-..|.... + +-
T Consensus 55 ~~A~GyAr~---tg~~~v~~~TsGpG~~N~---~~gi~~A~~~~vPvl~itg~~~~~~~~~~---~~Q~~d~~~~~~~~t 125 (549)
T 3eya_A 55 FAAGAEAQL---SGELAVCAGSCGPGNLHL---INGLFDCHRNHVPVLAIAAHIPSSEIGSG---YFQETHPQELFRECS 125 (549)
T ss_dssp HHHHHHHHH---HSSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEESCGGGTTSC---CTTCCCHHHHTSTTC
T ss_pred HHHHHHHHH---hCCCEEEEeCCCCcHhhh---HHHHHHHHhhCCCEEEEeCCCchhhcCCC---CCCccCHHHHHhhhh
Confidence 346666654 345567778888888883 456778889999999988654321 1110 0111222221 1 11
Q ss_pred cceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEE
Q 018967 254 VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMD 289 (348)
Q Consensus 254 ipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~ 289 (348)
-....| .+++.+.+.+.+|+..+.. .||+.|++-
T Consensus 126 k~~~~v--~~~~~~~~~i~~A~~~A~~~~GPV~l~iP 160 (549)
T 3eya_A 126 HYCELV--SSPEQIPQVLAIAMRKAVLNRGVSVVVLP 160 (549)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred heEEEe--CCHHHHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 222344 3566777777777777666 899999975
No 60
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=87.04 E-value=2 Score=43.28 Aligned_cols=104 Identities=18% Similarity=0.106 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCC-chHHhh--cC
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKS-PSYYKR--GD 252 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~-~~~~~~--g~ 252 (348)
-+|.|.|.+. ++-.++++..|=|++|. .-++..|...++|+|+|+-+-... ++.. . ... .|.... .+
T Consensus 55 ~~A~Gyar~t---g~p~v~~~TsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~~~~-~--~Q~~~d~~~~~~~~ 125 (563)
T 2uz1_A 55 HAAEGYARAG---AKLGVALVTAGGGFTNA---VTPIANAWLDRTPVLFLTGSGALRDDETN-T--LQAGIDQVAMAAPI 125 (563)
T ss_dssp HHHHHHHHHH---TSCEEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTSC-C--TTCCCCHHHHHGGG
T ss_pred HHHHHHHHHh---CCCEEEEEccCccHHHH---HHHHHHHHhcCCCEEEEeCCCCcccCCch-h--hhhhccHHHHhhhh
Confidence 3466666543 44556777778888873 345666788899999998765542 2111 0 111 232221 12
Q ss_pred CcceEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEEe
Q 018967 253 YVPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDTY 291 (348)
Q Consensus 253 gipg~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t~ 291 (348)
-.....| .+++++.+.+.+|+..+.. .||+.|++-..
T Consensus 126 tk~~~~v--~~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 126 TKWAHRV--MATEHIPRLVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp CSEEEEC--CCGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred hceEEEc--CCHHHHHHHHHHHHHHhcCCCCceEEEEeCHH
Confidence 2223445 4677788888888877766 59999988543
No 61
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=86.83 E-value=2.2 Score=43.14 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHhh--cCC
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDY 253 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~~--g~g 253 (348)
-+|.|.|.+ .++-.++++..|=|++| ..-++..|..-++|+|+|+-+-... ++... .....|.... .+-
T Consensus 62 ~~A~Gyar~---tg~p~v~~~TsGpG~~N---~~~~v~~A~~~~~Pll~itg~~~~~~~~~~~--~~Q~~d~~~~~~~~~ 133 (573)
T 2iht_A 62 VAADVLARI---TGRPQACWATLGPGMTN---LSTGIATSVLDRSPVIALAAQSESHDIFPND--THQCLDSVAIVAPMS 133 (573)
T ss_dssp HHHHHHHHH---HCSCEEEEECTTHHHHH---HHHHHHHHHHHTCCEEEEEEESCGGGCCTTT--STTCCCHHHHHGGGS
T ss_pred HHHHHHHHH---HCCCEEEEEccCchHHH---HHHHHHHHHhhCCCEEEEcccCcccccCCcC--ccccCCHHHHHHhHh
Confidence 345666654 34456677777888877 3456777888899999998765542 22200 0111232221 122
Q ss_pred cceEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018967 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (348)
Q Consensus 254 ipg~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (348)
-....+ .+++++.+.+.+|+..+.. .||+.|++-.
T Consensus 134 k~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 170 (573)
T 2iht_A 134 KYAVEL--QRPHEITDLVDSAVNAAMTEPVGPSFISLPV 170 (573)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHTBSSCCCEEEEEEH
T ss_pred hEEEEc--CCHHHHHHHHHHHHHHHhcCCCceEEEEecc
Confidence 222444 4677888888888888776 4999999864
No 62
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=86.62 E-value=1.8 Score=44.23 Aligned_cols=102 Identities=15% Similarity=0.093 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCc-cccc--ccccccCCchHHhhcCC
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHY-GMGT--AEWRAAKSPSYYKRGDY 253 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~-~i~~--~~~~~~~~~~~~~~g~g 253 (348)
-+|.|.|.+ .+.-.++++..|=|++|. .-++..|..-+.|+|+|+-+-.. .++. .++. ....+.+ .+-
T Consensus 64 ~aA~GyAr~---tg~~gv~~~TsGpG~~N~---~~gia~A~~~~vPvl~itG~~~~~~~~~~~~Q~~--d~~~~~~-~~t 134 (603)
T 4feg_A 64 MAAAADAKL---TGKIGVCFGSAGPGGTHL---MNGLYDAREDHVPVLALIGQFGTTGMNMDTFQEM--NENPIYA-DVA 134 (603)
T ss_dssp HHHHHHHHH---HSSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTTTTSCCTTCC--CCGGGGT-TTC
T ss_pred HHHHHHHHH---hCCceEEEecCCchHHHH---HHHHHHHHHcCCCEEEEecCCcccccCCCccccc--cHHHHhh-hhc
Confidence 346666654 345567777888888883 45677888899999988855332 1111 1110 0111111 111
Q ss_pred cceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEE
Q 018967 254 VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMD 289 (348)
Q Consensus 254 ipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~ 289 (348)
.....|. +++.+.+.+.+|+..+.+ .||++|++-
T Consensus 135 k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP 169 (603)
T 4feg_A 135 DYNVTAV--NAATLPHVIDEAIRRAYAHQGVAVVQIP 169 (603)
T ss_dssp SEEEECC--CSTTHHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred eEEEEcC--CHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 2223442 444566666666655555 899999874
No 63
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=86.56 E-value=1.8 Score=43.79 Aligned_cols=103 Identities=12% Similarity=0.053 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHhh--cCC
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDY 253 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~~--g~g 253 (348)
-+|.|.|.+ .++-.++++..|=|++|. .-++..|..-++|+|+|+-+-... ++.. . ....|.... .+-
T Consensus 62 ~~A~Gyar~---tg~p~v~~~TsGpG~~N~---~~~l~~A~~~~vPll~itg~~~~~~~~~~-~--~Q~~d~~~~~~~~t 132 (566)
T 1ozh_A 62 FMAAAVGRI---TGKAGVALVTSGPGCSNL---ITGMATANSEGDPVVALGGAVKRADKAKQ-V--HQSMDTVAMFSPVT 132 (566)
T ss_dssp HHHHHHHHH---HSSCEEEEECSTHHHHTT---HHHHHHHHHHTCCEEEEEEECCTTTC---------CCCHHHHHGGGC
T ss_pred HHHHHHHHH---HCCCEEEEEccChHHHHH---HHHHHHHHhcCCCEEEEeCCCccccCCCC-c--ccccCHHHHHHHHh
Confidence 346666654 344556777778888873 445777777899999988665432 2211 0 111232221 122
Q ss_pred cceEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018967 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (348)
Q Consensus 254 ipg~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (348)
.....| .+++++.+.+.+|+..+.. .||+.|++-.
T Consensus 133 k~~~~v--~~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~ 169 (566)
T 1ozh_A 133 KYAIEV--TAPDALAEVVSNAFRAAEQGRPGSAFVSLPQ 169 (566)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred heEEEc--CCHHHHHHHHHHHHHHHhcCCCCeEEEEeCh
Confidence 223445 4677788888888877766 5999998864
No 64
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=86.37 E-value=1.8 Score=44.98 Aligned_cols=102 Identities=21% Similarity=0.181 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHh--hcCC
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYK--RGDY 253 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~--~g~g 253 (348)
-+|.|.|.+ .+.-.+++|..|=|++|. .-++..|..-++|+|+|+-+-... ++.. .....|... +.+-
T Consensus 134 ~aAdGyAr~---tGkpgvv~~TsGpG~~N~---~~gia~A~~d~vPllvItG~~~~~~~g~~---a~Q~~Dq~~i~~~~t 204 (677)
T 1t9b_A 134 HMAEGYARA---SGKPGVVLVTSGPGATNV---VTPMADAFADGIPMVVFTGQVPTSAIGTD---AFQEADVVGISRSCT 204 (677)
T ss_dssp HHHHHHHHH---HSSCEEEEECSTHHHHTT---HHHHHHHHHHTCCEEEEEEECCTTTTTSC---CTTCCCHHHHTGGGS
T ss_pred HHHHHHHHH---HCCCEEEEECCChHHHHH---HHHHHHHHHcCCCEEEEeCCCChhhcCCC---CccccCHHHHhhhhe
Confidence 456677655 345567888888888873 445777778899999998664432 1111 001112211 1111
Q ss_pred cceEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEE
Q 018967 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMD 289 (348)
Q Consensus 254 ipg~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~ 289 (348)
-....| .++..+.+.+.+|+..+.+ .||++|++-
T Consensus 205 k~~~~v--~~~~~i~~~i~~A~~~A~~grpGPV~l~lP 240 (677)
T 1t9b_A 205 KWNVMV--KSVEELPLRINEAFEIATSGRPGPVLVDLP 240 (677)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEE
T ss_pred eEEEEc--CCHHHHHHHHHHHHHHHhhCCCceEEEEcC
Confidence 222445 4677888888888887765 589999986
No 65
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=85.54 E-value=1.6 Score=42.41 Aligned_cols=108 Identities=19% Similarity=0.140 Sum_probs=58.9
Q ss_pred chhHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCc-ccc--ccccc-ccCCchHHh
Q 018967 174 AQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHY-GMG--TAEWR-AAKSPSYYK 249 (348)
Q Consensus 174 ~~lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~-~i~--~~~~~-~~~~~~~~~ 249 (348)
..+.+|+|+|++ ..++++...|.|-... .+.|..++..++|+++++-+... +.+ +..+. ......|..
T Consensus 75 ~a~~~a~Gaa~a-----G~r~~~~ts~~G~~~~---~d~l~~aa~~~~P~Vi~~~~~~~~~~g~~~~~~~sd~~~~~~~~ 146 (395)
T 1yd7_A 75 ASIAAAIGASWA-----GAKAMTATSGPGFSLM---QENIGYAVMTETPVVIVDVQRSGPSTGQPTLPAQGDIMQAIWGT 146 (395)
T ss_dssp HHHHHHHHHHHT-----TCCEEEEEETTHHHHH---TTTCC----CCCCEEEEEEC------------------------
T ss_pred HHHHHHHHHHHh-----CCcEEEEeCchHHHHH---HHHHHHHHhcCCCEEEEEeeCCCCCCCCCcccchhHHHHHHhcc
Confidence 344556666665 3457778889888653 45566677889998877766443 322 21111 010111111
Q ss_pred hc-CCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEe
Q 018967 250 RG-DYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (348)
Q Consensus 250 ~g-~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~ 291 (348)
.| ++++.+ .-.++.+++..+..|.+.+++ +.|+++....+
T Consensus 147 ~g~~g~~vl--~p~~~qea~~l~~~A~~lA~~~~~PVi~~~~~~ 188 (395)
T 1yd7_A 147 HGDHSLIVL--SPSTVQEAFDFTIRAFNLSEKYRTPVILLTDAE 188 (395)
T ss_dssp --CCCCEEE--CCCSHHHHHHHHHHHHHHHHHHTSEEEEEECHH
T ss_pred CCCcceEEE--eCCCHHHHHHHHHHHHHHHHHHCCCEEEEcchh
Confidence 11 345434 446899999999999987777 89999988765
No 66
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=85.54 E-value=2.8 Score=39.77 Aligned_cols=99 Identities=19% Similarity=0.127 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHhCCCCcEEEE-EeCCccccchhHHHHHHHHH---------HCCCCeEEEEecCCc-ccccccccccC
Q 018967 175 QIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALNIAA---------LWDLPAILVCENNHY-GMGTAEWRAAK 243 (348)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv~-~~GDGa~~~G~~~Ealn~Aa---------~~~LPvI~Vv~NN~~-~i~~~~~~~~~ 243 (348)
.+.+|.|+|++ + -++++. .++|... ..++.+.+.+ +.++|+++++.+ ++ +-..+...+
T Consensus 74 ~v~~a~G~A~~----G-~rp~~~~~f~~F~~---~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G~tHs~-- 142 (341)
T 2ozl_B 74 FAGIAVGAAMA----G-LRPICEFMTFNFSM---QAIDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVAAQHSQ-- 142 (341)
T ss_dssp HHHHHHHHHHT----T-CEEEEECSSGGGGG---GGHHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCCGGGCC--
T ss_pred HHHHHHHHHHC----C-CEEEEEeccHHHHH---HHHHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCCcchhh--
Confidence 34567777764 2 344554 4888872 3455555433 389999999885 53 211122211
Q ss_pred CchHHhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEEE
Q 018967 244 SPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMD 289 (348)
Q Consensus 244 ~~~~~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~~ 289 (348)
..+ ..--.+|++.| .=.|+.+.+..++.|++. ++|++|-..
T Consensus 143 ~~e--a~l~~iP~l~V~~Psd~~e~~~~l~~a~~~---~~Pv~i~~~ 184 (341)
T 2ozl_B 143 CFA--AWYGHCPGLKVVSPWNSEDAKGLIKSAIRD---NNPVVVLEN 184 (341)
T ss_dssp CCH--HHHHTSTTCEEECCCSHHHHHHHHHHHHHS---SSCEEEEEC
T ss_pred HHH--HHhccCCCCEEEEeCCHHHHHHHHHHHHhc---CCCEEEEEC
Confidence 112 11112555433 556899999999998864 899987653
No 67
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=85.44 E-value=3.8 Score=41.24 Aligned_cols=105 Identities=18% Similarity=0.190 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-ccccc--ccc--cCC-chHHh-
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAE--WRA--AKS-PSYYK- 249 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~--~~~--~~~-~~~~~- 249 (348)
-+|.|.|.+ .+ -.++++..|=|++| ..-++..|...++|+|+|+-+-... ++... ... ... .|...
T Consensus 55 ~~A~Gyar~---tg-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~ 127 (566)
T 2vbi_A 55 FSAEGYARS---NG-AAAAVVTFSVGAIS---AMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEM 127 (566)
T ss_dssp HHHHHHHHH---HS-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHHHH
T ss_pred HHHHHHHhh---cC-CeEEEEeCCCCHHH---HHHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCcchHHHHHH
Confidence 456676654 34 55666777888887 3445667888999999998765532 21110 000 001 12222
Q ss_pred h-cCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018967 250 R-GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (348)
Q Consensus 250 ~-g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (348)
. .+-.....|. +++++.+.+.+|+..+.. .||+.|++-.
T Consensus 128 ~~~~tk~~~~v~--~~~~~~~~l~~A~~~a~~~~GPV~l~iP~ 168 (566)
T 2vbi_A 128 ARQVTCAAESIT--DAHSAPAKIDHVIRTALRERKPAYLDIAC 168 (566)
T ss_dssp HHTTCSEEEEEC--SSSSHHHHHHHHHHHHHHHTCCEEEEEET
T ss_pred HhhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 1 1222334553 344455556666655555 7999999864
No 68
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=84.87 E-value=4.2 Score=40.97 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-ccccc--ccc--cCC-chHHhh
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAE--WRA--AKS-PSYYKR 250 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~--~~~--~~~-~~~~~~ 250 (348)
-+|.|.|.+. + -.++++..|=|++| ..-++..|...++|+|+|+-+-... .+... ... ... .|....
T Consensus 55 ~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~ 127 (568)
T 2wvg_A 55 FSAEGYARAK---G-AAAAVVTYSVGALS---AFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEM 127 (568)
T ss_dssp HHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHH
T ss_pred HHHHHHHHhh---C-CeEEEEeCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHHH
Confidence 4566766553 4 56777788888887 3456777889999999998765542 21110 000 001 122221
Q ss_pred --cCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEe
Q 018967 251 --GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (348)
Q Consensus 251 --g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~ 291 (348)
.+-.....|. +++.+.+.+.+|+..+.. .||+.|++-..
T Consensus 128 ~~~~tk~~~~v~--~~~~~~~~l~~A~~~A~~~~GPV~l~iP~d 169 (568)
T 2wvg_A 128 AKNITAAAEAIY--TPEEAPAKIDHVIKTALREKKPVYLEIACN 169 (568)
T ss_dssp HTTSCSCEEEEC--SGGGHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred HHhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 1222335553 566666667777666666 79999998653
No 69
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=83.97 E-value=2.2 Score=42.99 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHh--hcCCc
Q 018967 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYK--RGDYV 254 (348)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~--~g~gi 254 (348)
+|.|.|.+ .+.-.+++|..|=|++| ..-++..|..-++|+|+|+-+-... ++... ......|... +.+-.
T Consensus 60 ~A~Gyar~---tg~pgv~~~TsGpG~~N---~~~gi~~A~~~~vPll~itg~~~~~~~~~~~-~~~Q~~dq~~~~~~~tk 132 (564)
T 2q28_A 60 AAAASGFL---TQKPGICLTVSAPGFLN---GLTALANATVNGFPMIMISGSSDRAIVDLQQ-GDYEELDQMNAAKPYAK 132 (564)
T ss_dssp HHHHHHHH---HSSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTS-CCTTCCCHHHHHGGGSS
T ss_pred HHHHHHHH---hCCCEEEEEccCchHHH---HHHHHHHHHhcCCCEEEEeCCCCccccCCCC-CccccccHHHHHHHhhh
Confidence 46666654 34445777777888877 3456777888899999998765432 11000 0011112211 11222
Q ss_pred ceEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018967 255 PGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (348)
Q Consensus 255 pg~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (348)
....| .+++.+.+.+.+|+..+.. .||+.|++-.
T Consensus 133 ~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 168 (564)
T 2q28_A 133 AAFRV--NQPQDLGIALARAIRVSVSGRPGGVYLDLPA 168 (564)
T ss_dssp EEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred eeeec--CCHHHHHHHHHHHHHHHhcCCCceEEEEcCH
Confidence 22444 3566777777888777765 6999998753
No 70
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=83.78 E-value=2.3 Score=42.91 Aligned_cols=104 Identities=11% Similarity=0.092 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHhh--cCCc
Q 018967 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDYV 254 (348)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~~--g~gi 254 (348)
+|.|.|.+ .+.-.+++|..|=|++| ..-++..|..-++|+|+|+-+-... ++... ......|.... .+--
T Consensus 62 ~A~GyAr~---tg~pgv~~~TsGpG~~N---~~~~i~~A~~~~vPll~itg~~~~~~~~~~~-~~~Q~~dq~~~~~~~tk 134 (568)
T 2c31_A 62 AASIAGYI---EGKPGVCLTVSAPGFLN---GVTSLAHATTNCFPMILLSGSSEREIVDLQQ-GDYEEMDQMNVARPHCK 134 (568)
T ss_dssp HHHHHHHH---HSSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTC-CCTTCCCHHHHSGGGSS
T ss_pred HHHHHHHH---hCCCEEEEEcCCccHHH---HHHHHHHHHhcCCCEEEEccCCCccccCCCC-CcccccCHHHHHHhhhh
Confidence 46666654 34445777777888887 3556777888899999998765432 11000 00111122211 1112
Q ss_pred ceEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018967 255 PGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (348)
Q Consensus 255 pg~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (348)
....| .+++.+.+.+.+|+..+.. .||+.|++-.
T Consensus 135 ~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 170 (568)
T 2c31_A 135 ASFRI--NSIKDIPIGIARAVRTAVSGRPGGVYVDLPA 170 (568)
T ss_dssp EEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEET
T ss_pred eeeec--CCHHHHHHHHHHHHHHhcCCCCceEEEeCCH
Confidence 22344 3666777778888777665 6899998753
No 71
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=83.57 E-value=5.9 Score=41.42 Aligned_cols=109 Identities=19% Similarity=0.193 Sum_probs=63.8
Q ss_pred Cccccch-hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchH
Q 018967 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSY 247 (348)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~ 247 (348)
.|+-.++ +.+|.|+|+. +.-++++..+..=+ . ...-++.++++.++|++||....+++.+.......+..++
T Consensus 437 ~GIaE~~mv~~A~GlA~~----gG~~Pv~~tF~~F~-d--~~~~~ir~~al~~lpvv~v~thdg~gvG~dG~THq~ied~ 509 (700)
T 3rim_A 437 FGVREHAMGAILSGIVLH----GPTRAYGGTFLQFS-D--YMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTHQPIEHL 509 (700)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGG-G--GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTSCSSHH
T ss_pred cCccHHHHHHHHHHHHHc----CCCEEEEEecHHHH-H--HHHHHHHHhcCCCCCEEEEEeCCCcccCCCCCccCChhHH
Confidence 4444443 3667787765 22344444332211 1 1233577899999999999987777644322222223344
Q ss_pred HhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccC--CCEEEE
Q 018967 248 YKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKN--GPMILE 287 (348)
Q Consensus 248 ~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~--gP~lIe 287 (348)
+-.. .+|++.| -=-|+.++..+++.|++. .+ +|++|-
T Consensus 510 a~lr-~iPnl~V~~Pad~~e~~~~l~~Ai~~--~~~~~Pv~ir 549 (700)
T 3rim_A 510 SALR-AIPRLSVVRPADANETAYAWRTILAR--RNGSGPVGLI 549 (700)
T ss_dssp HHHH-TSTTCEEECCSSHHHHHHHHHHHHTT--TTCSSCEEEE
T ss_pred HHHh-cCCCCEEEeCCCHHHHHHHHHHHHHc--cCCCCCEEEE
Confidence 3321 3666544 445888999999998863 25 799985
No 72
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=83.53 E-value=6.8 Score=40.90 Aligned_cols=109 Identities=19% Similarity=0.126 Sum_probs=64.9
Q ss_pred Cccccch-hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchH
Q 018967 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSY 247 (348)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~ 247 (348)
.|+-.++ +.+|+|+|+. +.-++++..+.-=+. ...-++.++++.++||+|++...+++.+.......+..++
T Consensus 432 ~GIaE~~mv~~A~GlA~~----gG~~P~~~tf~~Fs~---f~~~air~~al~~lpVv~v~~~~gigvG~dG~THq~ied~ 504 (690)
T 3m49_A 432 YGVREFAMGAAMNGIALH----GGLKTYGGTFFVFSD---YLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHEPIEQL 504 (690)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGCCSSHH
T ss_pred cCchHHHHHHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHHHhcCCCcEEEEECCCcCCCCCCCccCCHHHH
Confidence 4555544 3667787764 123445544422221 1133577889999999999988887544322222223344
Q ss_pred HhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018967 248 YKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (348)
Q Consensus 248 ~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (348)
+-.. .+|++.| -=-|+.++..+++.|++. .++|++|-
T Consensus 505 a~lr-~iPnl~V~~Pad~~E~~~~l~~Ai~~--~~~Pv~ir 542 (690)
T 3m49_A 505 AALR-AMPNVSVIRPADGNESVAAWRLALES--TNKPTALV 542 (690)
T ss_dssp HHHH-TSTTCEEECCSSHHHHHHHHHHHHHC--SSSCEEEE
T ss_pred HHHh-cCCCCEEEeeCCHHHHHHHHHHHHHc--CCCCEEEE
Confidence 3221 3666544 445889999999999873 27899884
No 73
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=83.19 E-value=2.4 Score=43.25 Aligned_cols=106 Identities=16% Similarity=0.094 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-ccc--ccccccCCchHHhhcCC
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGT--AEWRAAKSPSYYKRGDY 253 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~--~~~~~~~~~~~~~~g~g 253 (348)
-+|.|.|.+ .++-.+++|..|=|++|- .-++..|..-++|+|+|.-+-... +++ .++. ....+.+ .+-
T Consensus 83 ~aA~GyAr~---tgkpgv~~~TsGpG~~N~---~~gia~A~~~~vPlv~ItG~~~~~~~g~~~~Q~~--d~~~~~~-~~t 153 (604)
T 2x7j_A 83 FFALGLAKA---KQRPVLLICTSGTAAANF---YPAVVEAHYSRVPIIVLTADRPHELREVGAPQAI--NQHFLFG-NFV 153 (604)
T ss_dssp HHHHHHHHH---HTSCEEEEECSSHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGSSSCCTTCC--CCTTTTG-GGS
T ss_pred HHHHHHHHh---hCCCEEEEECChhHHHHH---HHHHHHHhhcCCCEEEEeCCCCHHHhCCCCCCcC--cHHHHhh-hhe
Confidence 346666654 345567788888888873 445777778899999998665432 211 1110 0011111 111
Q ss_pred cceEEEc-CCC-H---HHHHHHHHHHHHHhcc--CCCEEEEEEEe
Q 018967 254 VPGLKVD-GMD-A---LAVKQACKFAKEHALK--NGPMILEMDTY 291 (348)
Q Consensus 254 ipg~~VD-G~D-~---~av~~a~~~A~~~ar~--~gP~lIe~~t~ 291 (348)
-....|. ..+ + ..+.+.+++|+..+.. .||+.|++-..
T Consensus 154 k~~~~v~~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 154 KFFTDSALPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp SCEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECC
T ss_pred eeeeecCCCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccC
Confidence 1224443 222 0 0166666777666655 69999998653
No 74
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=82.48 E-value=4.6 Score=41.12 Aligned_cols=104 Identities=14% Similarity=0.083 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchHHhh--cCCcc
Q 018967 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVP 255 (348)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~~~~--g~gip 255 (348)
+|.|.|.+. .++-.++++..|=|++|. .-++..|..-+.|+|+|+-+-.........-+ ..|.... .+--.
T Consensus 80 ~A~GyAr~t--gg~~~v~~~TsGpG~~N~---~~~l~~A~~~~vPlvvItg~~p~~~~~~~~~Q--~~d~~~~~~~~tk~ 152 (616)
T 2pan_A 80 MAEGYTRAT--AGNIGVCLGTSGPAGTDM---ITALYSASADSIPILCITGQAPRARLHKEDFQ--AVDIEAIAKPVSKM 152 (616)
T ss_dssp HHHHHHHHS--TTCCEEEEECSTHHHHTS---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCTT--CCCHHHHHGGGSSE
T ss_pred HHHHHHHhc--CCCceEEEeCCCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCccccc--ccCHHHHHHHHHHh
Confidence 456666441 134456667778888773 44577788889999988876543211110001 1222221 12122
Q ss_pred eEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018967 256 GLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (348)
Q Consensus 256 g~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (348)
...+ .++..+...+++|+..+.. .||+.|++-.
T Consensus 153 ~~~v--~~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 153 AVTV--REAALVPRVLQQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp EEEC--CSGGGHHHHHHHHHHHHHSSSCCCEEEEEEH
T ss_pred hccc--CCHHHHHHHHHHHHHHHhcCCCceEEEEcch
Confidence 2344 4567788888888877765 5899998853
No 75
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=82.34 E-value=3.1 Score=42.32 Aligned_cols=103 Identities=15% Similarity=0.096 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHhhcCCcc
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKRGDYVP 255 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~~g~gip 255 (348)
-+|.|.|.+ .++-.++++..|=|++|. .-++.-|..-++|+|+|+-+-... ++...........+.+ .+--.
T Consensus 57 ~~A~GyAr~---tgk~~v~~~tsGpG~~N~---~~gl~~A~~~~vPll~Itg~~p~~~~g~~~~Q~~d~~~~~~-~~tk~ 129 (590)
T 1v5e_A 57 MAAVMQSKF---GGNLGVTVGSGGPGASHL---INGLYDAAMDNIPVVAILGSRPQRELNMDAFQELNQNPMYD-HIAVY 129 (590)
T ss_dssp HHHHHHHHT---TCCCCEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTTTCTTCCCCHHHHH-TTCSE
T ss_pred HHHHHHHHH---HCCCEEEEeCcChHHHHH---HHHHHHHHhcCCCEEEEcCCCCcccCCCCcccccCHHHHHH-hhccE
Confidence 345555543 344567777778888873 345666778899999998765542 2211000001111221 12222
Q ss_pred eEEEcCCCHHHHHHHHHHHHHHhcc-C-CCEEEEEE
Q 018967 256 GLKVDGMDALAVKQACKFAKEHALK-N-GPMILEMD 289 (348)
Q Consensus 256 g~~VDG~D~~av~~a~~~A~~~ar~-~-gP~lIe~~ 289 (348)
...+ .++.++.+.+++|+..+.+ + ||++| +-
T Consensus 130 ~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l-iP 162 (590)
T 1v5e_A 130 NRRV--AYAEQLPKLVDEAARMAIAKRGVAVLE-VP 162 (590)
T ss_dssp EEEC--CSGGGHHHHHHHHHHHHHHTTSEEEEE-EE
T ss_pred EEEe--CCHHHHHHHHHHHHHHHhcCCCceEEE-Ec
Confidence 3444 4677788888888877766 4 89999 53
No 76
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=82.30 E-value=10 Score=39.28 Aligned_cols=110 Identities=16% Similarity=0.112 Sum_probs=65.9
Q ss_pred Cccccch-hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchH
Q 018967 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSY 247 (348)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~ 247 (348)
.|+-.++ +++|+|+|+. +.-++++.++..-+. ..++++.+++..++|+++++...+++.+..........++
T Consensus 407 ~GIaE~~~~~~a~GlA~~----GG~~P~~~~~~~F~~---~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tHq~~edl 479 (673)
T 1r9j_A 407 FGVREHAMCAILNGLDAH----DGIIPFGGTFLNFIG---YALGAVRLAAISHHRVIYVATHDSIGVGEDGPTHQPVELV 479 (673)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTTCCSSHH
T ss_pred cCccHHHHHHHHHHHHhc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEECCccCcCCCCcccCCHHHH
Confidence 3444333 2467777654 223566666644332 2356688899999999999877777644221111122333
Q ss_pred HhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018967 248 YKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (348)
Q Consensus 248 ~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (348)
.-.. .+|++.| .=.|+.++..+++.|++. .++|++|-.
T Consensus 480 a~lr-~iP~l~V~~Pad~~e~~~~l~~a~~~--~~~Pv~i~~ 518 (673)
T 1r9j_A 480 AALR-AMPNLQVIRPSDQTETSGAWAVALSS--IHTPTVLCL 518 (673)
T ss_dssp HHHH-HSTTCEEECCSSHHHHHHHHHHHHHC--TTCCEEEEC
T ss_pred HHHc-CCCCCEEEeCCCHHHHHHHHHHHHHh--CCCeEEEEE
Confidence 3221 2555543 556889999999999873 289999843
No 77
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=82.08 E-value=5.4 Score=38.26 Aligned_cols=98 Identities=16% Similarity=0.051 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEE-eCCccccchhHHHHHHH-HHHC--------CCCeEEEEecCCcccccccccccCCc
Q 018967 176 IPLGCGLAFAQKYSKDETVTFAL-YGDGAANQGQLFEALNI-AALW--------DLPAILVCENNHYGMGTAEWRAAKSP 245 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~~-~GDGa~~~G~~~Ealn~-Aa~~--------~LPvI~Vv~NN~~~i~~~~~~~~~~~ 245 (348)
+.+|.|+|++ + -++++.+ ++|... ..++.+.. ++.. ++|+++++.+.+..-+.+.. + ..
T Consensus 111 v~~a~G~A~~----G-~rpv~~~tf~~Fl~---~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~h--s-~~ 179 (369)
T 1ik6_A 111 LGFAMGMAMA----G-LKPVAEIQFVDFIW---LGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYH--S-NS 179 (369)
T ss_dssp HHHHHHHHHT----T-CEEEEECCCC-------CCHHHHHHHHHHHHC------CCCCEEEEEECC--------------
T ss_pred HHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCccc--c-cc
Confidence 4567777764 2 3455544 888763 23444533 4443 99999998866632111111 1 11
Q ss_pred hHHhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018967 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (348)
Q Consensus 246 ~~~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (348)
+. ..--.+|++.| .=.|+.+.+.+++.|++ .++|++|-.
T Consensus 180 ~~-a~l~~iPnl~V~~Psd~~e~~~ll~~A~~---~~~Pv~i~~ 219 (369)
T 1ik6_A 180 PE-AIFVHTPGLVVVMPSTPYNAKGLLKAAIR---GDDPVVFLE 219 (369)
T ss_dssp HH-HHHHTCTTCEEECCCSHHHHHHHHHHHHH---SSSCEEEEE
T ss_pred HH-HHHcCCCCcEEEecCCHHHHHHHHHHHHh---CCCCEEEEE
Confidence 21 11113455433 55689999999999886 489998843
No 78
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=81.94 E-value=4.2 Score=38.32 Aligned_cols=100 Identities=14% Similarity=0.029 Sum_probs=58.1
Q ss_pred chhHHHHHHHHHHHhCCCCcEEEE-EeCCccccchhHHHHHH-HHHH--------CCCCeEEEEecCCcccccccccccC
Q 018967 174 AQIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALN-IAAL--------WDLPAILVCENNHYGMGTAEWRAAK 243 (348)
Q Consensus 174 ~~lp~A~G~A~A~k~~~~~~~vv~-~~GDGa~~~G~~~Ealn-~Aa~--------~~LPvI~Vv~NN~~~i~~~~~~~~~ 243 (348)
+.+.+|.|+|++ + -++++. .++++.. ..++.+. .++. +++|+++++.+.+...+ + ....
T Consensus 63 ~~~~~a~G~A~~----G-~rp~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g~~~G-~--th~s 131 (338)
T 1qs0_B 63 GIVGTAVGMGAY----G-LRPVVEIQFADYFY---PASDQIVSEMARLRYRSAGEFIAPLTLRMPCGGGIYG-G--QTHS 131 (338)
T ss_dssp HHHHHHHHHHHH----T-CEEEEECSCGGGCG---GGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECCSSSC-C--SSSS
T ss_pred HHHHHHHHHHhC----C-CEEEEEeccHhHHH---HHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCCCCCC-c--cccc
Confidence 345677788776 2 344454 4888872 3455543 3443 35999999866542211 1 1112
Q ss_pred CchHHhhcCCcceEE-EcCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018967 244 SPSYYKRGDYVPGLK-VDGMDALAVKQACKFAKEHALKNGPMILEM 288 (348)
Q Consensus 244 ~~~~~~~g~gipg~~-VDG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (348)
..|..-.. .+|++. +.-.|+.+.+..++.|++. ++|++|-.
T Consensus 132 ~~d~~~l~-~iP~l~V~~Psd~~e~~~~l~~A~~~---~~Pv~i~~ 173 (338)
T 1qs0_B 132 QSPEAMFT-QVCGLRTVMPSNPYDAKGLLIASIEC---DDPVIFLE 173 (338)
T ss_dssp CCCHHHHT-TSTTCEEECCCSHHHHHHHHHHHHHS---SSCEEEEE
T ss_pred ccHHHHHh-cCCCCEEEeeCCHHHHHHHHHHHHhc---CCcEEEEE
Confidence 22433211 244433 3556899999999998864 89998844
No 79
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=81.84 E-value=3.6 Score=41.02 Aligned_cols=105 Identities=18% Similarity=0.073 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHhh--cCC
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDY 253 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~~--g~g 253 (348)
-+|.|.|.+. +...++++..|=|++|. .-++..|...++|+|+|+-+-... ++.. .-+. ..|.... .+-
T Consensus 52 ~~A~Gyar~t---g~~~v~~~tsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~~~~-~~q~-~~d~~~~~~~~~ 123 (528)
T 1q6z_A 52 GIADGYAQAS---RKPAFINLHSAAGTGNA---MGALSNAWNSHSPLIVTAGQQTRAMIGVE-ALLT-NVDAANLPRPLV 123 (528)
T ss_dssp HHHHHHHHHH---TSCEEEEEEHHHHHHHT---HHHHHHHHHTTCCEEEEEEECCHHHHTTT-CTTC-CTTGGGSSTTSC
T ss_pred HHHHHHHHHh---CCCEEEEEcCChHHHHH---HHHHHHHhhcCCCEEEEeCCCcccccCCC-cccc-cccHHHHHHHhh
Confidence 4566776553 45566777778888863 445677888999999998664431 1110 0011 0122221 111
Q ss_pred cceEEEcCCCHHHHHHHHHHHHHHhcc--CCCEEEEEEEe
Q 018967 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDTY 291 (348)
Q Consensus 254 ipg~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t~ 291 (348)
-....+ .+++++.+.+.+|+..+.. .||+.|++-..
T Consensus 124 k~~~~v--~~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d 161 (528)
T 1q6z_A 124 KWSYEP--ASAAEVPHAMSRAIHMASMAPQGPVYLSVPYD 161 (528)
T ss_dssp SCEECC--SSGGGHHHHHHHHHHHHHSSSCCCEEEEEEGG
T ss_pred HhhhcC--CCHHHHHHHHHHHHHHHhcCCCCcEEEEechh
Confidence 112334 3566677777777776665 58999998653
No 80
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=81.71 E-value=3.9 Score=41.29 Aligned_cols=105 Identities=16% Similarity=0.102 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccc--cccCCch-HHh-h-c
Q 018967 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEW--RAAKSPS-YYK-R-G 251 (348)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~--~~~~~~~-~~~-~-g 251 (348)
+|.|.|.+. ++-.+++|..|=|++|. .-++..|..-++|+|+|+-+-... ++.... -+....| ... . .
T Consensus 74 ~A~GyAr~t---gkp~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~~ 147 (565)
T 2nxw_A 74 AADAAARYS---STLGVAAVTYGAGAFNM---VNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFKE 147 (565)
T ss_dssp HHHHHHHHH---TSCEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTCC--CCCC-------CHHHHHHTT
T ss_pred HHHHHHHHh---CCCeEEEECCCCCHHHH---HHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHHHh
Confidence 466766553 44556777778888873 445777888999999998764332 211100 0000111 111 1 1
Q ss_pred CCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018967 252 DYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (348)
Q Consensus 252 ~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (348)
+-.....|. +++++.+.+.+|+..+.. .||+.|++-.
T Consensus 148 ~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 185 (565)
T 2nxw_A 148 ITVAQARLD--DPAKAPAEIARVLGAARAQSRPVYLEIPR 185 (565)
T ss_dssp SCSCEEECC--CTTTHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred hheEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEECCh
Confidence 222234553 444555556666655555 8999999873
No 81
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=80.05 E-value=2.7 Score=39.86 Aligned_cols=99 Identities=18% Similarity=0.137 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHhCCCCcEEEE-EeCCccccchhHHHHHH-HHHHCC--------C-CeEEEEecCCcccccccccccC
Q 018967 175 QIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALN-IAALWD--------L-PAILVCENNHYGMGTAEWRAAK 243 (348)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv~-~~GDGa~~~G~~~Ealn-~Aa~~~--------L-PvI~Vv~NN~~~i~~~~~~~~~ 243 (348)
.+.+|+|+|++ + -++++. .++++.. ..++.+. .++.++ + |+++++..-+.+.+ +. ...
T Consensus 79 ~v~~a~G~A~~----G-~rp~~~~tf~~F~~---~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~~~G-~t--h~~ 147 (342)
T 2bfd_B 79 IVGFGIGIAVT----G-ATAIAEIQFADYIF---PAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHG-AL--YHS 147 (342)
T ss_dssp HHHHHHHHHHT----T-CCEEEECSSGGGCG---GGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCCSSC-GG--GSS
T ss_pred HHHHHHHHHHC----C-CeeEEEecchhHHH---HHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCCCCC-cc--hhh
Confidence 35667777764 2 345554 4888854 2455554 455444 4 99988775432211 11 111
Q ss_pred CchHHhhcCCcceE-EEcCCCHHHHHHHHHHHHHHhccCCCEEEEE
Q 018967 244 SPSYYKRGDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEM 288 (348)
Q Consensus 244 ~~~~~~~g~gipg~-~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (348)
..|..-.. .+|++ .+.-.|+.+.+..++.|+++ ++|++|-.
T Consensus 148 ~~d~~~l~-~iP~l~V~~Psd~~e~~~~l~~a~~~---~~Pv~i~~ 189 (342)
T 2bfd_B 148 QSPEAFFA-HCPGIKVVIPRSPFQAKGLLLSCIED---KNPCIFFE 189 (342)
T ss_dssp CCCHHHHH-TSTTCEEECCSSHHHHHHHHHHHHHS---SSCEEEEE
T ss_pred HhHHHHHh-cCCCcEEEeeCCHHHHHHHHHHHHhc---CCcEEEEe
Confidence 22332211 25553 33557899999999999864 89999844
No 82
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=79.13 E-value=7 Score=36.56 Aligned_cols=98 Identities=18% Similarity=0.069 Sum_probs=56.6
Q ss_pred chhHHHHHHHHHHHhCCCCcEEEE-EeCCccccchhHHHHHHH-HHH--------CCCCeEEEEecCCcc-ccccccccc
Q 018967 174 AQIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALNI-AAL--------WDLPAILVCENNHYG-MGTAEWRAA 242 (348)
Q Consensus 174 ~~lp~A~G~A~A~k~~~~~~~vv~-~~GDGa~~~G~~~Ealn~-Aa~--------~~LPvI~Vv~NN~~~-i~~~~~~~~ 242 (348)
+.+.+|+|+|++ + -+++++ .+++... ..++.+.. ++. .++|+++++. .+++ .+.+. .+
T Consensus 61 ~~v~~a~G~A~~----G-~rp~~~~t~~~F~~---~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g~~--hs 129 (324)
T 1w85_B 61 GIGGLAIGLALQ----G-FRPVPEIQFFGFVY---EVMDSICGQMARIRYRTGGRYHMPITIRSP-FGGGVHTPEL--HS 129 (324)
T ss_dssp HHHHHHHHHHHT----T-CEEEEBCSSGGGGG---GTHHHHHTTGGGHHHHTTTSSCCCCEEEEE-ECSSSCCCTT--SS
T ss_pred HHHHHHHHHHhC----C-CEEEEEecchhHHH---HHHHHHHHHHHHHhhhccCCCcCCEEEEEe-ccCCCCCCCc--cc
Confidence 345667777764 2 344444 4888862 34555543 444 7999998876 3432 22111 11
Q ss_pred CCchHHhhcCCcceEE-EcCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018967 243 KSPSYYKRGDYVPGLK-VDGMDALAVKQACKFAKEHALKNGPMILE 287 (348)
Q Consensus 243 ~~~~~~~~g~gipg~~-VDG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (348)
.. +..-. -.+|++. +.-.|+.+.+..++.|++ .++|++|-
T Consensus 130 ~~-~~a~~-~~iP~l~V~~Psd~~e~~~~l~~a~~---~~~Pv~i~ 170 (324)
T 1w85_B 130 DS-LEGLV-AQQPGLKVVIPSTPYDAKGLLISAIR---DNDPVIFL 170 (324)
T ss_dssp CC-CHHHH-TTSTTCEEECCSSHHHHHHHHHHHHH---SSSCEEEE
T ss_pred cc-HHHHH-ccCCCCEEEeeCCHHHHHHHHHHHHH---cCCCEEEE
Confidence 12 22111 2356543 355789999999999886 38999884
No 83
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=78.88 E-value=7.9 Score=39.10 Aligned_cols=104 Identities=24% Similarity=0.215 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cc--cccccccCCchHHhhcCCc
Q 018967 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MG--TAEWRAAKSPSYYKRGDYV 254 (348)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~--~~~~~~~~~~~~~~~g~gi 254 (348)
+|.|.|.+ .++-.++++..|=|++|- .-++..|..-+.|+|+|.-+-... ++ ..++. ....+.+ .+--
T Consensus 64 aAdGyAr~---tG~pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~p~~~~g~~~~Qe~--d~~~~~~-~~tk 134 (578)
T 3lq1_A 64 FALGLAKA---SKRPVVLLCTSGTAAANY---FPAVAEANLSQIPLIVLTADRPHELRNVGAPQAM--DQLHLYG-SHVK 134 (578)
T ss_dssp HHHHHHHH---HCCCEEEEECSSHHHHTT---HHHHHHHHHTTCCEEEEEEECCGGGTTSSCTTCC--CCTTTTG-GGSS
T ss_pred HHHHHHHh---hCCCEEEEECCchhhhhh---hHHHHHHHhcCCCeEEEeCCCCHHhhcCCCCCCc--CHhhHHh-hhee
Confidence 46677655 355567888889998883 446778889999999888653321 11 11110 0011111 0111
Q ss_pred ceEEE-cCCCHH----HHHHHHHHHHHHhcc--CCCEEEEEEE
Q 018967 255 PGLKV-DGMDAL----AVKQACKFAKEHALK--NGPMILEMDT 290 (348)
Q Consensus 255 pg~~V-DG~D~~----av~~a~~~A~~~ar~--~gP~lIe~~t 290 (348)
....| +..+.. .+..++++|+..+.+ .||++|++-.
T Consensus 135 ~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 135 DFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp EEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred eEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 11333 233432 233456666665555 7999999864
No 84
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=78.76 E-value=10 Score=35.39 Aligned_cols=97 Identities=16% Similarity=0.106 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHHhCCCCcEEEE-EeCCccccchhHHHHHHH-HHH--------CCCCeEEEEecCCcc-cccccccccC
Q 018967 175 QIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALNI-AAL--------WDLPAILVCENNHYG-MGTAEWRAAK 243 (348)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv~-~~GDGa~~~G~~~Ealn~-Aa~--------~~LPvI~Vv~NN~~~-i~~~~~~~~~ 243 (348)
.+.+|+|+|++ + -++++. .+++.. + ..++.+.. ++. .++|+++++.. +++ .+.+... .
T Consensus 63 ~v~~a~G~A~~----G-~~p~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~-g~~~~~g~~hs--~ 131 (324)
T 1umd_B 63 IVGAALGMAAH----G-LRPVAEIQFADYI-F--PGFDQLVSQVAKLRYRSGGQFTAPLVVRMPS-GGGVRGGHHHS--Q 131 (324)
T ss_dssp HHHHHHHHHHH----T-CEEEEECSSGGGC-G--GGHHHHHHTTTTHHHHTTTSSCCCCEEEEEE-CSSSSCGGGSS--C
T ss_pred HHHHHHHHHHC----C-CEEEEEeccHhHH-H--HHHHHHHHHHHHHHhhcCCCCcCCEEEEEcC-CCCCCCCCccc--h
Confidence 35667888775 2 244554 488886 2 34555543 443 79999988863 432 2211111 1
Q ss_pred CchHHhhcCCcceE-EEcCCCHHHHHHHHHHHHHHhccCCCEEEE
Q 018967 244 SPSYYKRGDYVPGL-KVDGMDALAVKQACKFAKEHALKNGPMILE 287 (348)
Q Consensus 244 ~~~~~~~g~gipg~-~VDG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (348)
.+..-. -.+|++ .+.=.|+.+.+..++.|++ .++|++|-
T Consensus 132 -~~~a~~-~~iP~~~V~~P~d~~e~~~~l~~a~~---~~~Pv~i~ 171 (324)
T 1umd_B 132 -SPEAHF-VHTAGLKVVAVSTPYDAKGLLKAAIR---DEDPVVFL 171 (324)
T ss_dssp -CCHHHH-HTSTTCEEEECCSHHHHHHHHHHHHH---CSSCEEEE
T ss_pred -hHHHHH-hcCCCCEEEEeCCHHHHHHHHHHHHh---cCCCEEEE
Confidence 122111 124553 3355689999999999986 38999874
No 85
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=72.04 E-value=10 Score=37.94 Aligned_cols=105 Identities=8% Similarity=0.016 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCccc-cc--ccc--ccc-CCchHHh-
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGM-GT--AEW--RAA-KSPSYYK- 249 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i-~~--~~~--~~~-~~~~~~~- 249 (348)
-+|.|.|.+. + -.++++..|=|++| ..-++..|..-++|+|+|+-+-.... .. ... ... ...+...
T Consensus 56 ~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~~ 128 (563)
T 2vk8_A 56 YAADGYARIK---G-MSCIITTFGVGELS---ALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRM 128 (563)
T ss_dssp HHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHHH
T ss_pred HHHHHHHHhh---C-CcEEEEcCCCcHHH---HHHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcchHHHHHH
Confidence 4566776653 4 44777778888887 34456778888999999986644321 00 000 000 0002221
Q ss_pred -hcCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018967 250 -RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (348)
Q Consensus 250 -~g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (348)
+.+--....|. +++.+.+.+.+|+..+.. .||+.|++-.
T Consensus 129 ~~~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 169 (563)
T 2vk8_A 129 SANISETTAMIT--DIATAPAEIDRCIRTTYVTQRPVYLGLPA 169 (563)
T ss_dssp HHTTCSEEEECC--CTTTHHHHHHHHHHHHHHHTSCEEEEEET
T ss_pred hhhhEEEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 11222234553 444455555555554444 7999999864
No 86
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=69.83 E-value=17 Score=36.52 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-ccccc----cccc-CCchHHh-
Q 018967 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAE----WRAA-KSPSYYK- 249 (348)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~----~~~~-~~~~~~~- 249 (348)
-+|.|.|.+ .+ -.++++..|=|++| ..-++..|...++|+|+|+-+.... .+... .... ...+...
T Consensus 77 ~~A~GyAr~---tG-~~v~~~tsGpG~~N---~~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (570)
T 2vbf_A 77 YMADGYART---KK-AAAFLTTFGVGELS---AINGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHFMKM 149 (570)
T ss_dssp HHHHHHHHH---HS-CEEEEEETTHHHHH---HHHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHHHHH
T ss_pred HHHHHHHHH---hC-CeEEEEcCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeeccccchHHHHHH
Confidence 456677655 34 45777778888877 3445777888899999998765542 11100 0000 0011111
Q ss_pred -hcCCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEE
Q 018967 250 -RGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (348)
Q Consensus 250 -~g~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (348)
+.+-.....|. + ..+...+.+|+..+.. .||+.|++-.
T Consensus 150 ~~~~tk~~~~v~--~-~~~~~~l~~A~~~A~~~~GPV~l~iP~ 189 (570)
T 2vbf_A 150 HEPVTAARTLLT--A-ENATYEIDRVLSQLLKERKPVYINLPV 189 (570)
T ss_dssp TGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHCCCEEEEEEH
T ss_pred hhhhEEEEEEEC--c-ccHHHHHHHHHHHHhhCCCCEEEEcch
Confidence 11222234453 2 3444445555544444 7999999864
No 87
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=66.71 E-value=24 Score=39.23 Aligned_cols=110 Identities=13% Similarity=0.052 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcccccccccccCCchH-HhhcCCc
Q 018967 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSY-YKRGDYV 254 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~i~~~~~~~~~~~~~-~~~g~gi 254 (348)
+.+++|++++ +.++++.+--.+++ ...|.|..++-..+|+|+++.+-... ++.........|+ +.+..|+
T Consensus 67 ~~aaiGAa~a------GaR~~t~Ts~~Gl~--lm~e~l~~~ag~~~P~Vi~va~R~g~-~~glsi~~~hsd~~~ar~~G~ 137 (1231)
T 2c42_A 67 AGAVHGALAA------GALTTTFTASQGLL--LMIPNMYKISGELLPGVFHVTARAIA-AHALSIFGDHQDIYAARQTGF 137 (1231)
T ss_dssp HHHHHHHHHT------TCCEEEEECHHHHH--HHHHHHHHHHHTTCCCEEEEEECCCC-SSSBCCSCCSHHHHTTTTSSC
T ss_pred HHHHHHHHHc------CChHhhhccHHHHH--HHHHHHHHHhCCCCCEEEEECCCCcc-CCCCcCCCchhhHHHHhcCCc
Confidence 4567777765 34455554333333 35677765555689988887766531 1111111111122 2344455
Q ss_pred ceEEEcCCCHHHHHHHHHHHHHHhcc-CCCEEEEEEEecCCCCC
Q 018967 255 PGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHS 297 (348)
Q Consensus 255 pg~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~GHs 297 (348)
+ .+.-.++.+.+.-+..|...+.+ .-|+++-..++|. +|.
T Consensus 138 ~--vl~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~-sh~ 178 (1231)
T 2c42_A 138 A--MLASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRT-SHE 178 (1231)
T ss_dssp E--EEECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT-TTC
T ss_pred E--EEECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCccc-ccc
Confidence 3 34556888888888888766666 8999998888775 554
No 88
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=64.54 E-value=30 Score=34.53 Aligned_cols=103 Identities=18% Similarity=0.118 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCCcc-cccccccccCCchHHhh--cCCc
Q 018967 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR--GDYV 254 (348)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~~~-i~~~~~~~~~~~~~~~~--g~gi 254 (348)
+|.|.|.+ .++-.++++..|=|++|- .-++..|..-+.|+|+|.-+-... +++.. -+ ..|.... .+--
T Consensus 61 ~AdGyAr~---tG~pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~~~~~~g~~~-~Q--~~d~~~~~~~~tk 131 (556)
T 3hww_A 61 LALGLAKV---SKQPVAVIVTSGTAVANL---YPALIEAGLTGEKLILLTADRPPELIDCGA-NQ--AIRQPGMFASHPT 131 (556)
T ss_dssp HHHHHHHH---HCSCEEEEECSSHHHHTT---HHHHHHHHHHCCCEEEEEEECCGGGSSSSC-TT--CCCCTTTTTTCSS
T ss_pred HHHHHHHh---hCCCEEEEECCCcHHHhh---hHHHHHHHHhCCCeEEEeCCCCHHHhccCC-Cc--cccHHHHHhhhee
Confidence 45666654 355567888889999884 445777888899999888654432 21110 00 1111110 0111
Q ss_pred ceEEEc-CC---CHHHHHHHHHHHHHHhccCCCEEEEEEE
Q 018967 255 PGLKVD-GM---DALAVKQACKFAKEHALKNGPMILEMDT 290 (348)
Q Consensus 255 pg~~VD-G~---D~~av~~a~~~A~~~ar~~gP~lIe~~t 290 (348)
....|. .. .+..+.+++++|+.. ...||+.|++-.
T Consensus 132 ~~~~v~~~~~~~~~~~i~~~i~~A~~~-~r~GPV~i~iP~ 170 (556)
T 3hww_A 132 HSISLPRPTQDIPARWLVSTIDHALGT-LHAGGVHINCPF 170 (556)
T ss_dssp EEEECCCCCTTSCHHHHHHHHHHHHHS-CCSSCEEEEEEC
T ss_pred EEEecCCCcccccHHHHHHHHHHHHhc-CCCCCEEEeCCc
Confidence 123332 11 245577888888731 127999999864
No 89
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=56.95 E-value=26 Score=34.84 Aligned_cols=49 Identities=10% Similarity=0.101 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC
Q 018967 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH 231 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~ 231 (348)
.-+|.|.|.+. + -.++++..|=|++|. .-++.-|...++|+|+|+-+-.
T Consensus 56 ~~~A~Gyar~t---g-~~v~~~tsGpG~~N~---~~gv~~A~~~~~Pll~itg~~p 104 (552)
T 1ovm_A 56 SYAADGYARCK---G-FAALLTTFGVGELSA---MNGIAGSYAEHVPVLHIVGAPG 104 (552)
T ss_dssp HHHHHHHHHHH---S-CEEEEEETTHHHHHT---HHHHHHHHHTTCCEEEEEEECC
T ss_pred HHHHHHHHHhh---C-CcEEEEccCCcHHHH---HHHHHHHhhhcCCEEEEECCCC
Confidence 34577777664 3 347788888888763 4457788899999999987654
No 90
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=49.02 E-value=14 Score=31.27 Aligned_cols=26 Identities=15% Similarity=0.143 Sum_probs=22.6
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHH
Q 018967 322 ERIRKLILAHDLATEKELKVFIQLVY 347 (348)
Q Consensus 322 ~~~~~~L~~~g~~t~~el~~i~~~~~ 347 (348)
.-+.+.|+++|++|++||++-.++++
T Consensus 114 ~ALe~lLvekGvit~~EL~ar~aEv~ 139 (157)
T 2zzd_B 114 LTAARILVDKQFVTLTELHNKIVEMR 139 (157)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 45889999999999999998877765
No 91
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=39.48 E-value=1.3e+02 Score=32.47 Aligned_cols=100 Identities=18% Similarity=0.285 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhCCCCcEEEE--EeCCccccch--hHHHHH-HHH-HHC--CCCeEEEEecCCc-ccccccccccCCch
Q 018967 176 IPLGCGLAFAQKYSKDETVTFA--LYGDGAANQG--QLFEAL-NIA-ALW--DLPAILVCENNHY-GMGTAEWRAAKSPS 246 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~--~~GDGa~~~G--~~~Eal-n~A-a~~--~LPvI~Vv~NN~~-~i~~~~~~~~~~~~ 246 (348)
++.|.|+|++ ++..++|+ .+||= .+| ..++-+ +-+ +.| ++|+++++.. +| +.+ +...+....+
T Consensus 665 vg~a~G~A~~----G~~~lpv~e~qf~dF--~~~AQra~DQii~~~~ak~~~~~~vv~~l~~-G~~g~G-~~Hss~~~E~ 736 (933)
T 2jgd_A 665 LAFEYGYATA----EPRTLTIWEAQFGDF--ANGAQVVIDQFISSGEQKWGRMCGLVMLLPH-GYEGQG-PEHSSARLER 736 (933)
T ss_dssp HHHHHHHHHH----CTTSEEEEEC-CGGG--GGGGHHHHHHTTTTHHHHHCCCCCCEEEEEC-CCSSSC-TTSSCCCHHH
T ss_pred HHHHHHHHhc----CCCCCCEEEEEEhhh--hcccHHHHHHHHHHHHHHHccCCCEEEEEeC-CCCCCC-cccccchHHH
Confidence 4566666655 45544443 56653 332 233333 333 344 8999988875 55 332 2211111224
Q ss_pred HHhhcCCcceEEE-cCCCHHHHHHHHHHHHHHhcc-CCCEEE
Q 018967 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALK-NGPMIL 286 (348)
Q Consensus 247 ~~~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~-~gP~lI 286 (348)
|... ..+|++.| .=.|+.+.+..++.++. +. ++|++|
T Consensus 737 ~l~~-~~~pnm~V~~Pst~~e~~~lLr~a~~--~~~~~Pvii 775 (933)
T 2jgd_A 737 YLQL-CAEQNMQVCVPSTPAQVYHMLRRQAL--RGMRRPLVV 775 (933)
T ss_dssp HHHT-CCTTCCEEECCCSHHHHHHHHHHHHH--SSCCCCEEE
T ss_pred HHHH-hCCCCeEEEecCCHHHHHHHHHHHHH--hcCCCcEEE
Confidence 4432 23355443 55789999999988753 24 799988
No 92
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=34.19 E-value=97 Score=26.55 Aligned_cols=26 Identities=0% Similarity=0.180 Sum_probs=21.5
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHH
Q 018967 321 IERIRKLILAHDLATEKELKVFIQLV 346 (348)
Q Consensus 321 i~~~~~~L~~~g~~t~~el~~i~~~~ 346 (348)
+..+-+++.+.|.+++++++.+.+-.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (205)
T 2wns_A 171 LSKMLEILEQQKKVDAETVGRVKRFI 196 (205)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 35678888999999999999987644
No 93
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=34.16 E-value=1.2e+02 Score=26.98 Aligned_cols=144 Identities=11% Similarity=0.064 Sum_probs=68.2
Q ss_pred hHHHHHHHHHHHhCCC--CcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEec-CCcccccccccccCCchHHhhcC
Q 018967 176 IPLGCGLAFAQKYSKD--ETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCEN-NHYGMGTAEWRAAKSPSYYKRGD 252 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~--~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~N-N~~~i~~~~~~~~~~~~~~~~g~ 252 (348)
+--.+|-.+|.++... +.-+|+-.--|++. =+..+|...++|++++--. ..++...... . .+ --
T Consensus 70 ~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~-----~a~~lA~~L~~p~~~vrk~~k~~G~~~~i~----g-~~---~~ 136 (234)
T 3m3h_A 70 VRQTIAAGLEELIKEHFPTVEVIAGTATAGIA-----HAAWVSDRMDLPMCYVRSKAKGHGKGNQIE----G-KA---EK 136 (234)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEC---CHH-----HHHHHHHHHTCCEEEEC---------CCEE----S-CC---CT
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeccchHH-----HHHHHHHHcCCCEEEEEEeeccCCcceEEe----c-cc---CC
Confidence 3445677777666432 22233333233332 2456777889998765321 1222211110 0 00 01
Q ss_pred CcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEecCCCCCCCCCCCCCCCHHHHHHHHhcCCH------HHHHHH
Q 018967 253 YVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDP------IERIRK 326 (348)
Q Consensus 253 gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~~~YR~~~e~~~~~~~~DP------i~~~~~ 326 (348)
|-..+-|| |+..-=..+.++++.+++.|+.++.+.+.=- +....-.+...+..=| +..+-+
T Consensus 137 Gk~VLIVD--DvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~-----------~~~~~~~e~l~~~gi~v~sL~~~~dl~~ 203 (234)
T 3m3h_A 137 GQKVVVVE--DLISTGGSAITCVEALREAGCEVLGIVSIFT-----------YELEAGKEKLEAANVASYSLSDYSALTE 203 (234)
T ss_dssp TCEEEEEE--EEESSSHHHHHHHHHHHHTTCEEEEEEEEEE-----------CCCHHHHHHHHHTTCCEEESSCHHHHHH
T ss_pred CCEEEEEe--cccchhHHHHHHHHHHHHCCCEEEEEEEEEE-----------CcCchHHHHHHhcCCCEEEEeeHHHHHH
Confidence 33346666 4444444555555555567777766654210 1111111222111112 345678
Q ss_pred HHHHcCCCCHHHHHHHHHH
Q 018967 327 LILAHDLATEKELKVFIQL 345 (348)
Q Consensus 327 ~L~~~g~~t~~el~~i~~~ 345 (348)
++.+.|.+++++++.+++-
T Consensus 204 ~~~~~~~i~~~~~~~~~~~ 222 (234)
T 3m3h_A 204 VAAEKGIIGQAETKKLQEW 222 (234)
T ss_dssp HHHHTTSSCHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHH
Confidence 8889999999999888753
No 94
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=30.30 E-value=2.7e+02 Score=24.67 Aligned_cols=145 Identities=11% Similarity=0.050 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHhCCC--CcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC-CcccccccccccCCchHHhhcC
Q 018967 176 IPLGCGLAFAQKYSKD--ETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEWRAAKSPSYYKRGD 252 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~--~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN-~~~i~~~~~~~~~~~~~~~~g~ 252 (348)
+--.+|-.++.++... +.-+|+-.=-|++ .=+..+|...++|++++--.. .++...... . .+ --
T Consensus 82 ~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi-----~~A~~lA~~L~~p~~~vrk~~k~~G~~~~ie----g-~~---~~ 148 (243)
T 3dez_A 82 TRTLIENGFVETIKEAFPEVEVIAGTATAGI-----PHGAIIADKMNLPLAYIRSKPKDHGAGNQIE----G-RV---TK 148 (243)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEETTTTH-----HHHHHHHHHTTCCEEEECSSCC-----CCEE----S-CC---CT
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEecCchH-----HHHHHHHHHcCCCEEEEEEeeccCCceeEEE----e-cc---CC
Confidence 3445777777776532 2223333333333 334567888999987653211 122111110 0 00 01
Q ss_pred CcceEEEcCCCHHHHHHHHHHHHHHhccCCCEEEEEEEe--cCCCCCCCCCCCCCCCHHHHHHHHh---cCCHHHHHHHH
Q 018967 253 YVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTY--RYHGHSMSDPGSTYRTRDEISGVRQ---ERDPIERIRKL 327 (348)
Q Consensus 253 gipg~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~--R~~GHs~~D~~~~YR~~~e~~~~~~---~~DPi~~~~~~ 327 (348)
|-..+-|| |+..-=..+.++++.+++.|+.++.+.+. |..+ ...+.++..-- .---+..+-++
T Consensus 149 Gk~VLIVD--DvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~----------~a~e~l~~~gi~~~sL~~~~dl~~~ 216 (243)
T 3dez_A 149 GQKMVIIE--DLISTGGSVLDAVAAAQREGADVLGVVAIFTYELP----------KATANFEKASVKLVTLSNYSELIKV 216 (243)
T ss_dssp TCEEEEEE--EEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCH----------HHHHHHHHHTCCEEESSCHHHHHHH
T ss_pred CCEEEEEE--eeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCc----------hHHHHHHhcCCCEEEEeeHHHHHHH
Confidence 33346666 44444445555555555577777666532 2110 01122211000 00124557788
Q ss_pred HHHcCCCCHHHHHHHHHH
Q 018967 328 ILAHDLATEKELKVFIQL 345 (348)
Q Consensus 328 L~~~g~~t~~el~~i~~~ 345 (348)
+.+.|.+++++++.+++-
T Consensus 217 ~~~~~~i~~~~~~~~~~~ 234 (243)
T 3dez_A 217 AKVQGYIDADGLTLLKKF 234 (243)
T ss_dssp HHHTTSSCHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHH
Confidence 889999999999988753
No 95
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=30.28 E-value=57 Score=27.40 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=28.4
Q ss_pred CcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEe
Q 018967 192 ETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE 228 (348)
Q Consensus 192 ~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~ 228 (348)
...+|+++.||..+.+...+++..+...++++..|-.
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igi 147 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGV 147 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEE
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEe
Confidence 4578999999999888777888888777777654433
No 96
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=29.82 E-value=61 Score=27.04 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=27.5
Q ss_pred cEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC
Q 018967 193 TVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN 230 (348)
Q Consensus 193 ~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN 230 (348)
.++|+.++ ....|..+| +.+|...+.|||.+..++
T Consensus 79 D~vva~~~--~~d~Gt~~E-iGyA~algKPVi~l~~~~ 113 (165)
T 2khz_A 79 DVVVAEVT--QPSLGVGYE-LGRAVALGKPILCLFRPQ 113 (165)
T ss_dssp SEEEEECS--SCCHHHHHH-HHHHHHTCSSEEEEECTT
T ss_pred CEEEEECC--CCCCCHHHH-HHHHHHCCCEEEEEEcCC
Confidence 45666665 667888899 889999999999887665
No 97
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=29.39 E-value=64 Score=23.17 Aligned_cols=28 Identities=29% Similarity=0.301 Sum_probs=23.8
Q ss_pred EEEcCCCHHHHHHHHHHHHHHhcc-CCCE
Q 018967 257 LKVDGMDALAVKQACKFAKEHALK-NGPM 284 (348)
Q Consensus 257 ~~VDG~D~~av~~a~~~A~~~ar~-~gP~ 284 (348)
++..|.|.++...|+++.+..+|+ .|.+
T Consensus 5 irfrgddleafekalkemirqarkfagtv 33 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGTV 33 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCEE
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcceE
Confidence 566799999999999999999888 6643
No 98
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=28.82 E-value=53 Score=26.49 Aligned_cols=32 Identities=28% Similarity=0.190 Sum_probs=26.8
Q ss_pred CCcceEEEcCCCHHHHHHHHHHHHHHhcc-CCC
Q 018967 252 DYVPGLKVDGMDALAVKQACKFAKEHALK-NGP 283 (348)
Q Consensus 252 ~gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP 283 (348)
-|+-.++..|.|.+++..|+++.+..+|+ .|.
T Consensus 82 sgvm~i~f~gddlea~ekalkemirqarkfagt 114 (170)
T 4hhu_A 82 SGVMVIVFEGDDLEALEKALKEMIRQARKFAGT 114 (170)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred ceEEEEEEecCcHHHHHHHHHHHHHHHHhhcce
Confidence 45555788999999999999999999888 664
No 99
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=26.69 E-value=1.6e+02 Score=24.05 Aligned_cols=39 Identities=13% Similarity=0.063 Sum_probs=31.3
Q ss_pred CCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecC
Q 018967 190 KDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN 230 (348)
Q Consensus 190 ~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN 230 (348)
+++.++|++..-|... ...+++..|...+.|+|.|..|.
T Consensus 78 ~~~d~vI~iS~sG~t~--~~~~~~~~ak~~g~~vi~IT~~~ 116 (186)
T 1m3s_A 78 AEGDLVIIGSGSGETK--SLIHTAAKAKSLHGIVAALTINP 116 (186)
T ss_dssp CTTCEEEEECSSSCCH--HHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCCEEEEEcCCCCcH--HHHHHHHHHHHCCCEEEEEECCC
Confidence 4677888888888875 36788999999999998777653
No 100
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=26.10 E-value=63 Score=26.07 Aligned_cols=31 Identities=29% Similarity=0.191 Sum_probs=23.7
Q ss_pred CcceEEEcCCCHHHHHHHHHHHHHHhcc-CCC
Q 018967 253 YVPGLKVDGMDALAVKQACKFAKEHALK-NGP 283 (348)
Q Consensus 253 gipg~~VDG~D~~av~~a~~~A~~~ar~-~gP 283 (348)
|+-.++..|.|.+++..|+++.+..+|+ .|.
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagt 33 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGT 33 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcce
Confidence 3444667888999999999888888887 654
No 101
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=26.01 E-value=38 Score=25.32 Aligned_cols=24 Identities=13% Similarity=0.072 Sum_probs=21.1
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHH
Q 018967 321 IERIRKLILAHDLATEKELKVFIQ 344 (348)
Q Consensus 321 i~~~~~~L~~~g~~t~~el~~i~~ 344 (348)
+..+-.+|+++|++|+++.+.|..
T Consensus 24 v~~lld~L~~~~vlt~~~~e~I~~ 47 (94)
T 2p1h_A 24 TSYIMDHMISDGFLTISEEEKVRN 47 (94)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHc
Confidence 566888999999999999999975
No 102
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=26.00 E-value=3e+02 Score=29.28 Aligned_cols=103 Identities=11% Similarity=0.142 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEeCCccccchh---HHHHHHHHH--HC--CCCeEEEEecCCcccccccccccCCchHH
Q 018967 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQ---LFEALNIAA--LW--DLPAILVCENNHYGMGTAEWRAAKSPSYY 248 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~---~~Ealn~Aa--~~--~LPvI~Vv~NN~~~i~~~~~~~~~~~~~~ 248 (348)
++.|+|+|++ +++.++|.-.-=|.|.++. +.+ +-..+ .| ++|+++++-.-+++.+ +...+....+|.
T Consensus 597 vG~a~G~A~~----G~~~~~i~eaqf~dF~~~AQ~~~DQ-~i~~~~~k~~~~~~vvi~~p~G~~G~G-p~Hs~~~~E~~l 670 (868)
T 2yic_A 597 VGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDE-FISSGEAKWGQLSDVVLLLPHGHEGQG-PDHTSGRIERFL 670 (868)
T ss_dssp HHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHH-TTTTHHHHHCCCCCCEEEEECCCSSSC-TTSSCCCHHHHH
T ss_pred HHHHHHHHcc----CCCCceEEEEehHHHHhhHHHHHHH-HHHHHHHHhCCCCCEEEEecCCCCCCC-hhhcCCcHHHHH
Confidence 4566666655 4555555444444554443 333 32222 23 7899888875444432 222211122444
Q ss_pred hhcCCcceEEE-cCCCHHHHHHHHHHHHHHhcc-CCCEEEE
Q 018967 249 KRGDYVPGLKV-DGMDALAVKQACKFAKEHALK-NGPMILE 287 (348)
Q Consensus 249 ~~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~-~gP~lIe 287 (348)
.. ..+|++.| .=.|+.+.+..++.++.. . ++|++|-
T Consensus 671 ~l-~~~pnm~V~~Ps~p~~~~~lLr~a~~~--~~~~Pvii~ 708 (868)
T 2yic_A 671 QL-WAEGSMTIAMPSTPANYFHLLRRHGKD--GIQRPLIVF 708 (868)
T ss_dssp HH-CCTTSCEEECCCSHHHHHHHHHHHHHS--SCCCCEEEE
T ss_pred hc-CCCCCCEEEEeCCHHHHHHHHHHHHhc--CCCCcEEEE
Confidence 32 23555443 556899999999887752 3 5898763
No 103
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=24.51 E-value=66 Score=27.96 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=30.0
Q ss_pred CcEEEEEeCCccc-cchhHHHHHHHHH-HCCCCeEEEEec
Q 018967 192 ETVTFALYGDGAA-NQGQLFEALNIAA-LWDLPAILVCEN 229 (348)
Q Consensus 192 ~~~vv~~~GDGa~-~~G~~~Ealn~Aa-~~~LPvI~Vv~N 229 (348)
-..+|+++|+=.. ..++.|| +..|. ..++|||.|-.+
T Consensus 80 Sk~vIllIs~~T~~s~~v~wE-Ie~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 80 SKNIILFLSSITANSRALREE-MNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp EEEEEEECCTTCCCCHHHHHH-HHHHTTTTCCCEEEEETT
T ss_pred cCcEEEEEecCccccchhHHH-HHHHHHhcCCcEEEEECC
Confidence 3568889998886 4667775 99999 999999988765
No 104
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=23.95 E-value=99 Score=26.29 Aligned_cols=34 Identities=3% Similarity=-0.045 Sum_probs=23.3
Q ss_pred cEEEEEeCCccccchhHHHHHHHHHHCCCCeEEE
Q 018967 193 TVTFALYGDGAANQGQLFEALNIAALWDLPAILV 226 (348)
Q Consensus 193 ~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~V 226 (348)
++++.+.||+....+...++...+...++.+.+|
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEE
Confidence 3455666766555677778888888888876554
No 105
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=23.78 E-value=2.2e+02 Score=25.67 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=28.4
Q ss_pred EEEeCCccc--cchhHHHHHHHHHHCCCCeEEEEecC
Q 018967 196 FALYGDGAA--NQGQLFEALNIAALWDLPAILVCENN 230 (348)
Q Consensus 196 v~~~GDGa~--~~G~~~Ealn~Aa~~~LPvI~Vv~NN 230 (348)
|+|--||+. +.|.++-++.+|..++ .+.|+|.+.
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~ 38 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPL 38 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecC
Confidence 567778885 7889999999999999 888998653
No 106
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=23.03 E-value=83 Score=26.43 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=28.5
Q ss_pred cEEEEEeCCcc-ccchhHHHHHHHHHHCCCCeEEEEecCC
Q 018967 193 TVTFALYGDGA-ANQGQLFEALNIAALWDLPAILVCENNH 231 (348)
Q Consensus 193 ~~vv~~~GDGa-~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~ 231 (348)
.++|+++ ||. ...|..+| +.+|...+.||+.+..+-.
T Consensus 71 D~viA~l-dg~~~D~Gt~~E-iG~A~a~gkPVi~~~~D~R 108 (162)
T 3ehd_A 71 DLLVALL-DGPTIDAGVASE-IGVAYAKGIPVVALYTDSR 108 (162)
T ss_dssp SEEEEEC-CSSSCCHHHHHH-HHHHHHTTCCEEEECCCGG
T ss_pred CEEEEEC-CCCCCCCCHHHH-HHHHHHCCCEEEEEEcCcc
Confidence 4455555 665 58899999 8999999999988876654
No 107
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=22.71 E-value=3.6e+02 Score=29.54 Aligned_cols=104 Identities=11% Similarity=0.144 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHHhCCCCcEEEEEeCCccccchh---HHHHHHHHH-HC--CCCeEEEEecCCcccccccccccCCchHHh
Q 018967 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQ---LFEALNIAA-LW--DLPAILVCENNHYGMGTAEWRAAKSPSYYK 249 (348)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~~~GDGa~~~G~---~~Ealn~Aa-~~--~LPvI~Vv~NN~~~i~~~~~~~~~~~~~~~ 249 (348)
++.|+|+|++ +++-++|.-.-=|.|.++. +.+-++-+. .| ++|+++++-.-+.|.+ +...+....+|..
T Consensus 842 vg~a~G~A~~----G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G~G-~~Hs~~~~E~~l~ 916 (1113)
T 2xt6_A 842 VGFEYGYSVG----NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQG-PDHTSGRIERFLQ 916 (1113)
T ss_dssp HHHHHHHHHH----CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSC-TTSSCCCHHHHHH
T ss_pred HHHHHHHHhc----CCCCceEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCCCC-hhhhcccHHHHHh
Confidence 4556666655 4555555444444454443 333223221 23 8899988885443432 2222211223432
Q ss_pred hcCCcceEEE-cCCCHHHHHHHHHHHHHHhcc-CCCEEEE
Q 018967 250 RGDYVPGLKV-DGMDALAVKQACKFAKEHALK-NGPMILE 287 (348)
Q Consensus 250 ~g~gipg~~V-DG~D~~av~~a~~~A~~~ar~-~gP~lIe 287 (348)
. ..+|++.| .=.|+.+.+..++.++.+ . ++|++|-
T Consensus 917 l-~~~pnm~V~~Ps~~~~~~~lLr~a~~~--~~~~Pvii~ 953 (1113)
T 2xt6_A 917 L-WAEGSMTIAMPSTPANYFHLLRRHGKD--GIQRPLIVF 953 (1113)
T ss_dssp H-CCTTSCEEECCSSHHHHHHHHHHHHHS--SCCCCEEEE
T ss_pred c-CCCCCcEEEecCCHHHHHHHHHHHHhc--cCCCCEEEE
Confidence 2 23555544 556899999999988752 3 5898873
No 108
>3hht_B NitrIle hydratase beta subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: b.34.4.4 PDB: 2dpp_B 1v29_B
Probab=22.32 E-value=78 Score=28.29 Aligned_cols=30 Identities=13% Similarity=0.091 Sum_probs=24.7
Q ss_pred HHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 018967 311 ISGVRQERDPIERIRKLILAHDLATEKELKVFIQLV 346 (348)
Q Consensus 311 ~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~~~ 346 (348)
++.|. .-+.+.|++.|++|++||++..+++
T Consensus 73 Ye~WL------~ale~lLvekGvit~~EL~~r~~~~ 102 (229)
T 3hht_B 73 YGHWI------ATVAYNLVDTGVLDEKELDERTEVF 102 (229)
T ss_dssp HHHHH------HHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 56674 4589999999999999999877663
No 109
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=21.11 E-value=1.9e+02 Score=24.77 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=30.4
Q ss_pred CCCcEEEEEeCCccccchhHHHHHHHHHH--CCCCeEEEEecC
Q 018967 190 KDETVTFALYGDGAANQGQLFEALNIAAL--WDLPAILVCENN 230 (348)
Q Consensus 190 ~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~--~~LPvI~Vv~NN 230 (348)
.++.++|++..-|.+. .+.+++..|.. .+.++|.|..|.
T Consensus 105 ~~~DlvI~iS~SG~t~--~~i~~~~~ak~~~~Ga~vI~IT~~~ 145 (220)
T 3etn_A 105 QENDLLLLISNSGKTR--EIVELTQLAHNLNPGLKFIVITGNP 145 (220)
T ss_dssp CTTCEEEEECSSSCCH--HHHHHHHHHHHHCTTCEEEEEESCT
T ss_pred CCCCEEEEEcCCCCCH--HHHHHHHHHHhcCCCCeEEEEECCC
Confidence 4667888888888765 47788999998 899988777553
No 110
>4fm4_B NitrIle hydratase beta subunit; iron type hydratase, hydrolysis, sulfinic acid, lyase; 2.38A {Comamonas testosteroni}
Probab=21.09 E-value=65 Score=28.33 Aligned_cols=25 Identities=20% Similarity=0.193 Sum_probs=20.7
Q ss_pred HHHHHhcCCHHHHHHHHHHHcCCCCHHHHHH
Q 018967 311 ISGVRQERDPIERIRKLILAHDLATEKELKV 341 (348)
Q Consensus 311 ~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~ 341 (348)
++.|. .-+.+.|++.|++|++||++
T Consensus 69 Ye~Wl------~ale~lLvekG~it~~EL~a 93 (206)
T 4fm4_B 69 FERVF------TTAVTLCIEKGVFTAAELEA 93 (206)
T ss_dssp HHHHH------HHHHHHHHHTTSSCHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCcCHHHHhh
Confidence 56664 45889999999999999976
No 111
>1ugp_B NitrIle hydratase beta subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: b.34.4.4 PDB: 1ire_B 1ugq_B 1ugr_B 1ugs_B
Probab=21.02 E-value=88 Score=27.89 Aligned_cols=30 Identities=10% Similarity=-0.197 Sum_probs=24.0
Q ss_pred HHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 018967 311 ISGVRQERDPIERIRKLILAHDLATEKELKVFIQLV 346 (348)
Q Consensus 311 ~~~~~~~~DPi~~~~~~L~~~g~~t~~el~~i~~~~ 346 (348)
++.|. .-+.+.|++.|++|++||++..++.
T Consensus 69 Ye~Wl------~ale~lLvekGvit~~EL~ar~~~~ 98 (226)
T 1ugp_B 69 YWHWI------RTYIHHGVRTGKIDLEELERRTQYY 98 (226)
T ss_dssp HHHHH------HHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred HHHHH------HHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 56674 4589999999999999998776543
No 112
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=20.74 E-value=1.1e+02 Score=22.28 Aligned_cols=28 Identities=18% Similarity=0.354 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 018967 318 RDPIERIRKLILAHDLATEKELKVFIQLV 346 (348)
Q Consensus 318 ~DPi~~~~~~L~~~g~~t~~el~~i~~~~ 346 (348)
.-|+..=.+.|...| +|++||+..-+++
T Consensus 32 ~sp~~~K~~FL~sKG-Lt~eEI~~Al~ra 59 (70)
T 2w84_A 32 QSPLATRRAFLKKKG-LTDEEIDMAFQQS 59 (70)
T ss_dssp GSCHHHHHHHHHHTT-CCHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHcC-CCHHHHHHHHHHc
Confidence 357888888999988 5999999876654
No 113
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=20.26 E-value=1.5e+02 Score=24.15 Aligned_cols=41 Identities=10% Similarity=0.125 Sum_probs=32.8
Q ss_pred CCCCcEEEEEeCCccccchhHHHHHHHHHHCCCCeEEEEecCC
Q 018967 189 SKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH 231 (348)
Q Consensus 189 ~~~~~~vv~~~GDGa~~~G~~~Ealn~Aa~~~LPvI~Vv~NN~ 231 (348)
.+++.++|++.--|...+ ..+++..|...+.|+|.|..|..
T Consensus 80 ~~~~d~vi~iS~sG~t~~--~~~~~~~ak~~g~~vi~IT~~~~ 120 (180)
T 1jeo_A 80 YEKDDLLILISGSGRTES--VLTVAKKAKNINNNIIAIVCECG 120 (180)
T ss_dssp CCTTCEEEEEESSSCCHH--HHHHHHHHHTTCSCEEEEESSCC
T ss_pred CCCCCEEEEEeCCCCcHH--HHHHHHHHHHCCCcEEEEeCCCC
Confidence 346788999998888864 78899999999999988876543
Done!