Query 018968
Match_columns 348
No_of_seqs 293 out of 1865
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:50:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj3_A Cathepsin L-like protei 100.0 6.5E-86 2.2E-90 621.5 31.7 305 39-348 14-331 (331)
2 3tnx_A Papain; hydrolase, cyto 100.0 3.8E-85 1.3E-89 619.6 33.8 300 39-348 58-362 (363)
3 3qt4_A Cathepsin-L-like midgut 100.0 3.4E-85 1.2E-89 615.1 30.8 302 39-348 19-329 (329)
4 1pci_A Procaricain; zymogen, h 100.0 1.7E-84 5.7E-89 610.2 32.4 303 39-348 14-321 (322)
5 1by8_A Protein (procathepsin K 100.0 1.4E-84 4.9E-89 609.0 31.3 303 41-348 5-314 (314)
6 2c0y_A Procathepsin S; proenzy 100.0 1E-84 3.5E-89 610.2 28.5 303 40-348 5-315 (315)
7 1cs8_A Human procathepsin L; p 100.0 4.9E-84 1.7E-88 605.9 29.9 299 42-348 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 6.1E-83 2.1E-87 596.9 26.3 295 45-348 3-306 (310)
9 1xkg_A DER P I, major mite fec 100.0 5.7E-79 2E-83 569.4 24.6 287 46-348 7-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.6E-72 5.6E-77 546.3 22.4 279 62-346 135-433 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 1.1E-70 3.7E-75 516.6 18.9 275 65-347 2-311 (325)
12 1cqd_A Protein (protease II); 100.0 1.2E-66 4.1E-71 465.6 23.5 212 135-348 2-217 (221)
13 3p5u_A Actinidin; SAD, cystein 100.0 3.2E-66 1.1E-70 462.8 24.1 212 136-348 1-217 (220)
14 1iwd_A Ervatamin B; cysteine p 100.0 2.8E-66 9.5E-71 461.2 23.1 210 136-348 1-214 (215)
15 1ppo_A Protease omega; hydrola 100.0 3.6E-66 1.2E-70 461.0 23.6 210 136-348 1-215 (216)
16 3pbh_A Procathepsin B; thiol p 100.0 1.7E-66 5.7E-71 487.3 21.7 260 74-346 11-312 (317)
17 1yal_A Chymopapain; hydrolase, 100.0 7.1E-66 2.4E-70 459.7 24.0 210 136-348 1-215 (218)
18 3kwz_A Cathepsin K; enzyme inh 100.0 4.6E-66 1.6E-70 460.4 22.7 211 136-348 1-215 (215)
19 1s4v_A Cysteine endopeptidase; 100.0 1.2E-65 4.1E-70 461.4 24.2 214 135-348 1-219 (229)
20 3ovx_A Cathepsin S; hydrolase, 100.0 4.2E-66 1.4E-70 461.6 20.7 212 136-348 2-218 (218)
21 2fo5_A Cysteine proteinase EP- 100.0 1.3E-65 4.5E-70 468.4 22.7 214 135-348 3-224 (262)
22 3f75_A Toxopain-2, cathepsin L 100.0 8E-66 2.7E-70 461.7 19.4 215 134-348 5-224 (224)
23 1o0e_A Ervatamin C; plant cyst 100.0 2.6E-65 9.1E-70 452.7 22.3 205 136-348 1-207 (208)
24 2cio_A Papain; hydrolase/inhib 100.0 3.6E-65 1.2E-69 453.2 23.2 206 136-348 1-211 (212)
25 2xu3_A Cathepsin L1; hydrolase 100.0 2.7E-65 9.3E-70 456.8 22.2 212 136-348 1-220 (220)
26 3u8e_A Papain-like cysteine pr 100.0 1.7E-65 5.7E-70 458.6 19.8 210 136-348 1-219 (222)
27 1m6d_A Cathepsin F, catsf; pap 100.0 7E-65 2.4E-69 452.1 22.3 208 136-348 1-213 (214)
28 8pch_A Cathepsin H; hydrolase, 100.0 2.8E-65 9.6E-70 456.9 19.3 210 136-347 1-217 (220)
29 2b1m_A SPE31; papain-like, sug 100.0 1.1E-64 3.9E-69 459.4 23.6 210 135-348 1-224 (246)
30 2bdz_A Mexicain; cysteine prot 100.0 8.2E-65 2.8E-69 451.4 22.0 206 136-348 1-211 (214)
31 3ioq_A CMS1MS2; caricaceae, cy 100.0 6.9E-65 2.3E-69 451.9 20.8 206 136-348 1-211 (213)
32 3i06_A Cruzipain; autocatalyti 100.0 1.1E-64 3.7E-69 451.3 21.4 208 136-348 1-214 (215)
33 2oul_A Falcipain 2; cysteine p 100.0 1E-64 3.6E-69 458.7 21.4 210 135-348 17-240 (241)
34 3bwk_A Cysteine protease falci 100.0 1.4E-64 4.8E-69 458.4 21.5 211 134-348 18-242 (243)
35 3f5v_A DER P 1 allergen; aller 100.0 2.5E-64 8.4E-69 451.3 18.8 210 134-348 8-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 8E-60 2.7E-64 432.8 19.9 208 135-347 6-256 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 2.5E-59 8.7E-64 426.8 21.0 208 135-346 2-251 (254)
38 1deu_A Procathepsin X; cystein 100.0 1.9E-59 6.5E-64 432.0 19.6 208 133-347 33-274 (277)
39 2wbf_X Serine-repeat antigen p 100.0 7.8E-54 2.7E-58 393.2 21.7 208 138-347 9-260 (265)
40 3ois_A Cysteine protease; alph 100.0 7.3E-52 2.5E-56 384.5 16.0 231 89-333 14-272 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 1.1E-41 3.7E-46 328.4 16.6 196 135-333 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 6.6E-41 2.3E-45 323.2 15.2 195 136-333 53-413 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 8.5E-36 2.9E-40 281.7 18.3 183 148-333 22-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 2.4E-19 8.1E-24 139.6 10.0 75 39-114 17-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 2E-18 7E-23 128.4 7.2 68 44-113 7-77 (80)
46 1pxv_A Cysteine protease; hydr 97.5 0.0021 7.1E-08 53.3 12.9 131 152-335 25-164 (183)
47 1cv8_A Staphopain; cysteine pr 97.5 0.0031 1.1E-07 52.1 13.6 121 152-320 16-145 (174)
48 1x9y_A Cysteine proteinase; ha 97.4 0.003 1E-07 57.8 13.3 129 152-333 201-338 (367)
49 3erv_A Putative C39-like pepti 89.2 1.1 3.6E-05 39.3 7.5 55 247-304 125-187 (236)
50 3bb7_A Interpain A; cysteine p 54.4 26 0.00088 31.9 6.7 58 255-331 239-297 (321)
51 1dki_A Pyrogenic exotoxin B zy 53.2 33 0.0011 31.9 7.3 52 255-332 290-344 (371)
52 4d8b_A Streptopain; papain fol 52.3 25 0.00085 31.0 6.0 52 255-332 172-226 (261)
53 2r9f_A Calpain-1 catalytic sub 31.5 46 0.0016 30.4 4.5 38 294-331 246-312 (339)
54 2nqa_A Calpain 8; calpain, cal 26.0 65 0.0022 29.1 4.5 38 294-331 241-307 (326)
55 1ziv_A Calpain 9; cysteine pro 24.3 76 0.0026 28.9 4.6 38 294-331 245-312 (339)
56 1th5_A NIFU1; iron-sulfur clus 21.1 41 0.0014 23.4 1.6 27 148-176 37-63 (74)
No 1
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=6.5e-86 Score=621.50 Aligned_cols=305 Identities=40% Similarity=0.739 Sum_probs=271.7
Q ss_pred chhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhC---CCCceEEEcccCCCCCHHHHHHhhhccCCCC
Q 018968 39 HEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTNRFSDLTNDEFRALYTGYKMPS 115 (348)
Q Consensus 39 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~ 115 (348)
++..++.+|++|+++|+|.|.+.+|+.+|++||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++.+++.
T Consensus 14 ~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~ 93 (331)
T 3qj3_A 14 PSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPA 93 (331)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCS
T ss_pred CCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhccccccc
Confidence 4678899999999999999999899999999999999999999986 5689999999999999999999998766532
Q ss_pred CCCCCCCCccccccC----CCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCC--CcCCCHHHHh
Q 018968 116 PSHRSTTSSTFKYQN----LSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGAN--LIQLSEQQLV 189 (348)
Q Consensus 116 ~~~~~~~~~~~~~~~----~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS~q~l~ 189 (348)
..... ...+.... ....+||++||||++|+|+||||||.||||||||++++||++++++++. .++||+|+|+
T Consensus 94 ~~~~~--~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~Lv 171 (331)
T 3qj3_A 94 DLHKN--GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLV 171 (331)
T ss_dssp STTTT--CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHH
T ss_pred ccccc--CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHh
Confidence 21110 11111110 0123799999999999999999999999999999999999999999998 8999999999
Q ss_pred hhcCCCCCCCCCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEE
Q 018968 190 DCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSI 268 (348)
Q Consensus 190 dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v 268 (348)
||+.. +.||+||++..|++|+.+++||++|++|||.+.++.|.........+|.+|..++..++++|+++|++ |||+|
T Consensus 172 dC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v 250 (331)
T 3qj3_A 172 DCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAV 250 (331)
T ss_dssp HHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCEEE
T ss_pred hhccC-CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCEEE
Confidence 99986 88999999999999999988999999999999999998776667789999999987789999999987 99999
Q ss_pred EEEeccccccccCCceEecC-CC-CCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC-CcccccCccce
Q 018968 269 GIAAYTTEFKSYKEGIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE-GLCGIGTQSSY 345 (348)
Q Consensus 269 ~~~~~~~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~y 345 (348)
++++. .+|+.|++|||..+ |+ ..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++|
T Consensus 251 ~i~a~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~ 328 (331)
T 3qj3_A 251 AFDAD-DPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASV 328 (331)
T ss_dssp EECCC-TTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEE
T ss_pred EEEcc-cccccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcCCceee
Confidence 99998 45999999999885 75 578999999999998 8999999999999999999999999997 99999999999
Q ss_pred ecC
Q 018968 346 PLA 348 (348)
Q Consensus 346 p~~ 348 (348)
|++
T Consensus 329 p~v 331 (331)
T 3qj3_A 329 PTL 331 (331)
T ss_dssp EEC
T ss_pred eeC
Confidence 986
No 2
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=3.8e-85 Score=619.63 Aligned_cols=300 Identities=42% Similarity=0.788 Sum_probs=265.3
Q ss_pred chhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEcccCCCCCHHHHHHhhhccCCCCCCC
Q 018968 39 HEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSH 118 (348)
Q Consensus 39 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~~~~ 118 (348)
+++.+.++|++|+++|+|+|.+.+|+.+|++||++|+++|++||++. .+|++|+|+|+|||.+||++++++..+.....
T Consensus 58 s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~-~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~~ 136 (363)
T 3tnx_A 58 STERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKN-NSYWLGLNVFADMSNDEFKEKYTGSIAGNYTT 136 (363)
T ss_dssp CHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSC-CSEEECSCTTTTSCHHHHHHHHSCSSCSCCCC
T ss_pred CHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCC-CCeEEeccccccCCHHHHHHHhcccccccccc
Confidence 46789999999999999999999999999999999999999999974 79999999999999999999998865543221
Q ss_pred CCCCCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCC
Q 018968 119 RSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNG 198 (348)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~g 198 (348)
........ ......+||++||||++|.|+||||||.||||||||+++++|+++++++++.+.||+|+|+||+.. +.|
T Consensus 137 ~~~~~~~~--~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~-~~G 213 (363)
T 3tnx_A 137 TELSYEEV--LNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR-SYG 213 (363)
T ss_dssp SSSSSSCC--CCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCT
T ss_pred cccccccc--cCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC-CCC
Confidence 11001111 111224799999999999999999999999999999999999999999999999999999999986 789
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchh-hccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccc
Q 018968 199 CGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAA-QKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEF 277 (348)
Q Consensus 199 c~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~-~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f 277 (348)
|+||.+..|++|+.++ |+++|++|||.+..+.|... ......++.+|..++..++..++.+|++|||+|++++..++|
T Consensus 214 C~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~~~F 292 (363)
T 3tnx_A 214 CNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDF 292 (363)
T ss_dssp TBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCSHHH
T ss_pred CCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecchhh
Confidence 9999999999999887 99999999999988887765 334466788898888888999999999999999999876889
Q ss_pred cccCCceEecCCCCCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 278 KSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 278 ~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
++|++|||+.+|+..++|||+|||||+ +|||||||||++|||+|||||+|+. |+|||++.++||++
T Consensus 293 ~~Y~sGVy~~~~~~~lnHaV~iVGyG~-----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPik 362 (363)
T 3tnx_A 293 QLYRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 362 (363)
T ss_dssp HTEEEEEECCCCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEEC
T ss_pred hCCCCCEECCCCCCCCCeEEEEEEcCC-----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeeccc
Confidence 999999999999988999999999986 4999999999999999999999984 56999999999985
No 3
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=3.4e-85 Score=615.14 Aligned_cols=302 Identities=37% Similarity=0.746 Sum_probs=267.4
Q ss_pred chhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhC---CCCceEEEcccCCCCCHHHHHHhhhccCCCC
Q 018968 39 HEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTNRFSDLTNDEFRALYTGYKMPS 115 (348)
Q Consensus 39 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~ 115 (348)
++..++..|++|+++|+|.|.+.+|+.+|++||++|+++|++||++ ++.+|++|+|+|+|||.+||++ ++|.+++.
T Consensus 19 ~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~~ 97 (329)
T 3qt4_A 19 PKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKAQ 97 (329)
T ss_dssp -CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCCC
T ss_pred CHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCcccc
Confidence 4567888999999999999998889999999999999999999985 5689999999999999999999 77765422
Q ss_pred CCCCCC-CCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC
Q 018968 116 PSHRST-TSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN 194 (348)
Q Consensus 116 ~~~~~~-~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~ 194 (348)
...... ....+.... .+||++||||++ +|+||||||.||||||||++++||+++++++++.++||+|+|+||+..
T Consensus 98 ~~~~~~~~~~~~~~~~---~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~ 173 (329)
T 3qt4_A 98 KPKHPENLRMPYVSSK---KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSS 173 (329)
T ss_dssp ------CCEEECCCCC---SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGG
T ss_pred cccccccccccccCCc---cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccc
Confidence 111100 011111111 379999999999 999999999999999999999999999999999999999999999874
Q ss_pred -CCCCCCCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEe
Q 018968 195 -GNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAA 272 (348)
Q Consensus 195 -~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~ 272 (348)
++.||+||++..|++|+.++ |+++|++|||.+.++.|.........+|.+|..++..++++|+++|++ |||+|++++
T Consensus 174 ~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a 252 (329)
T 3qt4_A 174 YGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDA 252 (329)
T ss_dssp GTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred cCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCcccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEec
Confidence 57899999999999999999 999999999999999998776667789999999987889999999987 999999999
Q ss_pred ccccccccCCceEecC-CC-CCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC-CcccccCccceecC
Q 018968 273 YTTEFKSYKEGIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE-GLCGIGTQSSYPLA 348 (348)
Q Consensus 273 ~~~~f~~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~yp~~ 348 (348)
+ .+|+.|++|||..+ |+ ..++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 253 ~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~yp~v 329 (329)
T 3qt4_A 253 T-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGIATAASYPAL 329 (329)
T ss_dssp C-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTTTCEEEEC
T ss_pred C-hhhhhccCceeecCCCCCCcCCEEEEEEEEEee-CCccEEEEEeCCCCcccCCcEEEEEeCCCCccCCCCceeEeeC
Confidence 8 59999999999885 75 578999999999998 7999999999999999999999999997 99999999999986
No 4
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=1.7e-84 Score=610.17 Aligned_cols=303 Identities=45% Similarity=0.858 Sum_probs=269.5
Q ss_pred chhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEcccCCCCCHHHHHHhhhccCCCCCCC
Q 018968 39 HEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSH 118 (348)
Q Consensus 39 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~~~~ 118 (348)
++..+..+|++|+++|+|.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.++.....
T Consensus 14 ~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 92 (322)
T 1pci_A 14 STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYVGSLIDATIE 92 (322)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSC
T ss_pred chHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhcCCCCccccc
Confidence 4667888999999999999998899999999999999999999987 479999999999999999999888765432211
Q ss_pred CCCCCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCC
Q 018968 119 RSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNG 198 (348)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~g 198 (348)
.. ....+... ...+||++||||++|.|+||||||.||||||||++++||+++++++++.+.||+|+|+||+. .+.|
T Consensus 93 ~~-~~~~~~~~--~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~-~~~g 168 (322)
T 1pci_A 93 QS-YDEEFINE--DIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHG 168 (322)
T ss_dssp CC-CSEECCCC--CCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT-TSCG
T ss_pred cc-cccccccc--cccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC-CCCC
Confidence 00 00111111 12379999999999999999999999999999999999999999999999999999999997 4789
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchhh-ccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccc
Q 018968 199 CGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQ-KAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEF 277 (348)
Q Consensus 199 c~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~-~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f 277 (348)
|+||++..|++|+.++ |+++|++|||.+..+.|.... ....++|.+|..++.+++++|+++|++|||+|+++++..+|
T Consensus 169 C~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~~~~f 247 (322)
T 1pci_A 169 CKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPF 247 (322)
T ss_dssp GGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTTCHHH
T ss_pred CCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEecccccc
Confidence 9999999999999998 899999999999999998763 34567899999998778999999998899999999975689
Q ss_pred cccCCceEecCCCCCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 278 KSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 278 ~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
+.|++|||+.+|+..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 248 ~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~~ 321 (322)
T 1pci_A 248 QLYKGGIFEGPCGTKVDGAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321 (322)
T ss_dssp HTEEEEEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEECC
T ss_pred cccCCeEeCCCCCCCCCEEEEEEEEecc-CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEEe
Confidence 9999999998898888999999999998 7999999999999999999999999995 99999999999985
No 5
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.4e-84 Score=608.99 Aligned_cols=303 Identities=41% Similarity=0.779 Sum_probs=267.2
Q ss_pred hHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhC---CCCceEEEcccCCCCCHHHHHHhhhccCCCCCC
Q 018968 41 QSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPS 117 (348)
Q Consensus 41 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~~~ 117 (348)
..++.+|++|+++|+|.|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||+++++|.+++...
T Consensus 5 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 84 (314)
T 1by8_A 5 EILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH 84 (314)
T ss_dssp CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccc
Confidence 45778999999999999998899999999999999999999985 357899999999999999999888876543221
Q ss_pred CCCCCCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCC
Q 018968 118 HRSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNN 197 (348)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~ 197 (348)
... ...+... .....||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. ++.
T Consensus 85 ~~~--~~~~~~~-~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~~ 160 (314)
T 1by8_A 85 SRS--NDTLYIP-EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-END 160 (314)
T ss_dssp CCS--SSSSBCC-CCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT-TSC
T ss_pred ccC--Ccccccc-ccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCC
Confidence 110 0111111 111239999999999999999999999999999999999999999999999999999999997 488
Q ss_pred CCCCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEecccc
Q 018968 198 GCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTE 276 (348)
Q Consensus 198 gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~ 276 (348)
||+||++..|++|+.+++|+++|++|||.+.++.|.........+|.+|..++..++++|+++|++ |||+|+++++..+
T Consensus 161 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~ 240 (314)
T 1by8_A 161 GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTS 240 (314)
T ss_dssp GGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCGGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred CCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCCccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHH
Confidence 999999999999998766999999999999999998765556788999999987789999999987 9999999997568
Q ss_pred ccccCCceEecC-CCC-CCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeC-CCcccccCccceecC
Q 018968 277 FKSYKEGIFNGV-CGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRD-EGLCGIGTQSSYPLA 348 (348)
Q Consensus 277 f~~y~~Giy~~~-~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~yp~~ 348 (348)
|+.|++|||+.+ |+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+ .|.|||++.++||++
T Consensus 241 f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 241 FQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 314 (314)
T ss_dssp HHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBTTTSTBTTEEEECCSSSCGGGTTSSCEEECC
T ss_pred hhhccCceecCCCCCCCCCCeEEEEEEEecc-CCceEEEEEcCCCCCcCcCCEEEEEcCCCCcCCccCeeEEeeC
Confidence 999999999887 875 78999999999998 899999999999999999999999999 599999999999985
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1e-84 Score=610.21 Aligned_cols=303 Identities=40% Similarity=0.783 Sum_probs=267.0
Q ss_pred hhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhC---CCCceEEEcccCCCCCHHHHHHhhhccCCCCC
Q 018968 40 EQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTNRFSDLTNDEFRALYTGYKMPSP 116 (348)
Q Consensus 40 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~~ 116 (348)
+..++.+|++|+++|+|.|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||+++++|.+++..
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 456778999999999999988889999999999999999999985 35799999999999999999988887654322
Q ss_pred CCCCCCCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhc-CC-
Q 018968 117 SHRSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCS-TN- 194 (348)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~-~~- 194 (348)
... ...+... ...+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+ ..
T Consensus 85 ~~~---~~~~~~~--~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~ 159 (315)
T 2c0y_A 85 WQR---NITYKSN--PNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKY 159 (315)
T ss_dssp GGS---CBCC--------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGG
T ss_pred ccC---CccccCc--ccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhccccc
Confidence 100 0111111 1236999999999999999999999999999999999999999999999999999999998 42
Q ss_pred CCCCCCCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEec
Q 018968 195 GNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAY 273 (348)
Q Consensus 195 ~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~ 273 (348)
++.||+||++..|++|+.+++|+++|++|||.+..+.|.........+|.+|..++..++++|+++|++ |||+|+++++
T Consensus 160 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~ 239 (315)
T 2c0y_A 160 GNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDAR 239 (315)
T ss_dssp TCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCCcccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecC
Confidence 478999999999999998766999999999999999998765556788999999987789999999987 9999999998
Q ss_pred cccccccCCceEecC-CCCCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeC-CCcccccCccceecC
Q 018968 274 TTEFKSYKEGIFNGV-CGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRD-EGLCGIGTQSSYPLA 348 (348)
Q Consensus 274 ~~~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~yp~~ 348 (348)
.++|+.|++|||+.+ |+..++|||+|||||++ +|++|||||||||++||++|||||+|+ .|.|||++.++||++
T Consensus 240 ~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 240 HPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 315 (315)
T ss_dssp SHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred chhhhccCCCcccCCCCCCcCCEEEEEEEEeec-CCCcEEEEEcCCCCCcCCCcEEEEEcCCCCccCcCceeEEeeC
Confidence 568999999999887 88888999999999998 899999999999999999999999999 599999999999985
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=4.9e-84 Score=605.89 Aligned_cols=299 Identities=41% Similarity=0.829 Sum_probs=264.3
Q ss_pred HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhC---CCCceEEEcccCCCCCHHHHHHhhhccCCCCCCC
Q 018968 42 SVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSH 118 (348)
Q Consensus 42 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~~~~ 118 (348)
.++.+|++|+++|+|.| +.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++.+++....
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~ 85 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRK 85 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCSC
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCcccc
Confidence 57789999999999999 8889999999999999999999985 3579999999999999999998888765432211
Q ss_pred CCCCCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC-CCC
Q 018968 119 RSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN-GNN 197 (348)
Q Consensus 119 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~ 197 (348)
...+.. ....+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. ++.
T Consensus 86 ----~~~~~~--~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 86 ----GKVFQE--PLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp ----CEECCC--CTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred ----CccccC--ccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 011111 1123799999999999999999999999999999999999999999999999999999999863 478
Q ss_pred CCCCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEecccc
Q 018968 198 GCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTE 276 (348)
Q Consensus 198 gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~ 276 (348)
||+||++..|++|+.+++|+++|++|||.+.++.|.........+|.+|..++. ++++|+++|++ |||+|+++++..+
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~~ 238 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHES 238 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCCccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCChh
Confidence 999999999999998666999999999999999998765556788999999986 89999999987 9999999998568
Q ss_pred ccccCCceEecC-CCC-CCCcEEEEEEEe---ecCCCccEEEEEcCCCCCCCCCceEEEEeCC-CcccccCccceecC
Q 018968 277 FKSYKEGIFNGV-CGT-QLDHAVTIVGFG---TTEDGANYWLIKNSWGDTWGDAGYMKILRDE-GLCGIGTQSSYPLA 348 (348)
Q Consensus 277 f~~y~~Giy~~~-~~~-~~~Hav~iVGyg---~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~yp~~ 348 (348)
|+.|++|||+.+ |+. .++|||+||||| ++++|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 239 f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 239 FLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316 (316)
T ss_dssp HHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred hccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCCCccCccceeeEeeC
Confidence 999999999886 875 789999999999 5547899999999999999999999999996 99999999999985
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=6.1e-83 Score=596.94 Aligned_cols=295 Identities=37% Similarity=0.778 Sum_probs=258.3
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhC---CCCceEEEcccCCCCCHHHHHHhhhc-cCCCCCCCCC
Q 018968 45 EMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTNRFSDLTNDEFRALYTG-YKMPSPSHRS 120 (348)
Q Consensus 45 ~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~faDlt~~E~~~~~~~-~~~~~~~~~~ 120 (348)
++|++|+++|+|+|.+.+|+.+| .||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++ .+.+......
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 57999999999999888899999 9999999999999986 35799999999999999999988877 4432111000
Q ss_pred CCCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC-CCCCC
Q 018968 121 TTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN-GNNGC 199 (348)
Q Consensus 121 ~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc 199 (348)
...+... . .+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.. ++.||
T Consensus 82 --~~~~~~~--~-~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC 156 (310)
T 2o6x_A 82 --GVPYEAN--N-RAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGC 156 (310)
T ss_dssp --SEECCC-------CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGG
T ss_pred --CCccccc--c-CCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCC
Confidence 0111111 1 2699999999999999999999999999999999999999999999999999999999863 47899
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEecccccc
Q 018968 200 GGGTMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFK 278 (348)
Q Consensus 200 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~ 278 (348)
+||++..|++|+. +.|+++|++|||.+..+.|.........+|.+|..++..++++|+++|++ |||+|+++++ .+|+
T Consensus 157 ~GG~~~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~ 234 (310)
T 2o6x_A 157 GGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDFM 234 (310)
T ss_dssp GCCCHHHHHHHHT-TSCBCBTTTSCCCSSCCCCCCCGGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHHH
T ss_pred CCCCHHHHHHHHH-HCCcCchhcCCCCCCCCCccCCCCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhhh
Confidence 9999999999998 45999999999999999998765556788999999987789999999987 9999999998 6999
Q ss_pred ccCCceEecC-CC-CCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC-CcccccCccceecC
Q 018968 279 SYKEGIFNGV-CG-TQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE-GLCGIGTQSSYPLA 348 (348)
Q Consensus 279 ~y~~Giy~~~-~~-~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~yp~~ 348 (348)
.|++|||+.+ |+ ..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 235 ~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 235 MYRSGIYQSQTCSPLRVNHAVLAVGYGTQ-GGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 306 (310)
T ss_dssp TEEEEEECCSSCCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSEEEEEE
T ss_pred hCCCceecCCCCCCCCCCEEEEEEEEecc-CCceEEEEEeCCCCccCCCcEEEEEcCCCCcCCccceeeEEEe
Confidence 9999999864 87 478999999999998 8999999999999999999999999996 89999999999974
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=5.7e-79 Score=569.39 Aligned_cols=287 Identities=29% Similarity=0.520 Sum_probs=248.1
Q ss_pred HHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEcccCCCCCHHHHHHhhhccCCCCCCCCCCCCcc
Q 018968 46 MHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSHRSTTSST 125 (348)
Q Consensus 46 ~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~~~~~~~~~~~ 125 (348)
+|++|+++|+|.|.+.+|+.+|+.||++|+++|++ |+ + |+|+|+|||.+||++++++.+.+...... ...
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~----~---g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~--~~~ 76 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG----G---AINHLSDLSLDEFKNRFLMSAEAFEHLKT--QFD 76 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC----C---CCCTTTTSCHHHHHHHHSBCHHHHHHHHH--HHC
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc----C---CCCcccCCCHHHHHHHhcCCCCccccccC--Ccc
Confidence 59999999999999889999999999999999999 74 1 99999999999999877763221100000 000
Q ss_pred cccc---CCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCC
Q 018968 126 FKYQ---NLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGG 202 (348)
Q Consensus 126 ~~~~---~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG 202 (348)
+... .....+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. ..||+||
T Consensus 77 ~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~GC~GG 154 (312)
T 1xkg_A 77 LNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS--QHGCHGD 154 (312)
T ss_dssp -----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCC
T ss_pred cccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC--CCCCCCC
Confidence 1100 0001279999999999999999999999999999999999999999999999999999999982 3899999
Q ss_pred cHHHHHHHHHHcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc--CCeEEEEEeccc-cccc
Q 018968 203 TMEKAFEYIIQNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM--QPVSIGIAAYTT-EFKS 279 (348)
Q Consensus 203 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~--GPV~v~~~~~~~-~f~~ 279 (348)
++..|++|+.+. |+++|++|||.+..+.|. ......++|.+|..++..++++|+++|++ |||+|+++++.. +|+.
T Consensus 155 ~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~-~~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~ 232 (312)
T 1xkg_A 155 TIPRGIEYIQHN-GVVQESYYRYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRH 232 (312)
T ss_dssp CHHHHHHHHHHH-CEEBGGGSCCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHT
T ss_pred CHHHHHHHHHHc-CCCccccCCccCCCCCCC-CCCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccc
Confidence 999999999986 999999999999999998 54445788999999987789999999975 999999999833 8999
Q ss_pred cCCceEecC-CC-C-CCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCCcccccCccceecC
Q 018968 280 YKEGIFNGV-CG-T-QLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA 348 (348)
Q Consensus 280 y~~Giy~~~-~~-~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~yp~~ 348 (348)
|++|||..+ |+ . . +|||+|||||++ +|++|||||||||++||++|||||+|+.|.|||++.++||++
T Consensus 233 Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 233 YDGRTIIQRDNGYQPN-YHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 302 (312)
T ss_dssp CCSSSCBCCCCSSCCE-EEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEEC
T ss_pred cCCcEEcCCCCCCCcC-ceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeec
Confidence 999999875 76 4 6 999999999998 899999999999999999999999999999999999999974
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.6e-72 Score=546.28 Aligned_cols=279 Identities=26% Similarity=0.525 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCceEEE-cccCCCCCHHHHHHhhhccCCCCCCCCCCCCccccccCCCCCCCCCee
Q 018968 62 LEKEMRFKIFKENLEYIEKANKEGNRTYKLG-TNRFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSL 140 (348)
Q Consensus 62 ~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g-~N~faDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~ 140 (348)
.|+.+|++||++|+++|++||++. .+|+++ +|+|+|||.+||++++++.+++.+............ ....+||++|
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~-~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~lP~s~ 211 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQ-KSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQ--QKILFLPTSW 211 (441)
T ss_dssp --------------------------------------------------------------------------CCCSCE
T ss_pred hhHHHHHHHHHHHHHHHHHHHccC-CceEeecccccccCCHHHHHHHhCCCcccccccccCccccccc--cccccCCCCE
Confidence 567899999999999999999875 799998 899999999999998877543322111000000101 1224899999
Q ss_pred ecCCCC---CCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCc--CCCHHHHhhhcCCCCCCCCCCcHHHH-HHHHHHc
Q 018968 141 DWRDKK---AVTPIKDQQECGCCWAFSAVAAVEGITKISGANLI--QLSEQQLVDCSTNGNNGCGGGTMEKA-FEYIIQN 214 (348)
Q Consensus 141 Dwr~~g---~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~--~lS~q~l~dc~~~~~~gc~GG~~~~a-~~~~~~~ 214 (348)
|||+++ +|+||||||.||||||||++++||++++++++... .||+|+|+||+.. +.||+||++..+ ++|+.++
T Consensus 212 DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~-~~GC~GG~~~~aa~~yi~~~ 290 (441)
T 3pdf_A 212 DWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQY-AQGCEGGFPYLIAGKYAQDF 290 (441)
T ss_dssp ETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHTTHHHHHT
T ss_pred ECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccC-CCCCCCCchhHHHHHHHHhc
Confidence 999964 79999999999999999999999999999988764 5999999999975 889999999987 8999887
Q ss_pred CCCCCCCCCCCccCCCccchhhccccccccceEEcC----CchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecCC
Q 018968 215 QGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVP----SGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVC 289 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~----~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~ 289 (348)
|+++|++|||.+..+.|..........+.+|..++ ..++++|+++|.+ |||+|+++++ ++|+.|++|||..++
T Consensus 291 -Gi~tE~~yPY~~~~~~C~~~~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~~~ 368 (441)
T 3pdf_A 291 -GLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHHTG 368 (441)
T ss_dssp -CBCBGGGSCCCSSCCCSCCCSSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECCC-
T ss_pred -CCCcHHHeeecccCCCCCCccccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEecCC
Confidence 99999999999999999876555667788888885 3578999999876 9999999998 799999999998763
Q ss_pred C-------CCCCcEEEEEEEeec-CCCccEEEEEcCCCCCCCCCceEEEEeCCCcccccCcccee
Q 018968 290 G-------TQLDHAVTIVGFGTT-EDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYP 346 (348)
Q Consensus 290 ~-------~~~~Hav~iVGyg~~-~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~yp 346 (348)
. ..++|||+|||||++ ++|++|||||||||++|||+|||||+|+.|.|||++.++++
T Consensus 369 ~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~ 433 (441)
T 3pdf_A 369 LRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAA 433 (441)
T ss_dssp --CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEE
T ss_pred CCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEe
Confidence 2 247999999999986 37899999999999999999999999999999999988854
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=1.1e-70 Score=516.64 Aligned_cols=275 Identities=25% Similarity=0.516 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEEcc-cCCCCCHHHHHHhhhccCCCCCCCCCCCCccccccCCCCCCCCCeeecC
Q 018968 65 EMRFKIFKENLEYIEKANKEGNRTYKLGTN-RFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWR 143 (348)
Q Consensus 65 ~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N-~faDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr 143 (348)
..|+..+..+.++|++||++++.+|++++| +|+|||.+||++++ |..+............+.... ...+||++||||
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~lP~s~DwR 79 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNASILPKRRFTEEE-ARAPLPSSFDSA 79 (325)
T ss_dssp -------------------------------------------------------CCSCBCCCCHHH-HHCCCCSCEEHH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHh-CCCCCCcccccccCccccccc-cccCCCCcEehh
Confidence 357788888999999999876689999999 89999999998864 433221110000001111111 013799999999
Q ss_pred CC----CCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCC-CcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcCCCC
Q 018968 144 DK----KAVTPIKDQQECGCCWAFSAVAAVEGITKISGAN-LIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIA 218 (348)
Q Consensus 144 ~~----g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~-~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~ 218 (348)
++ |.|+||||||.||||||||++++||++++++++. .++||+|+|+||+...+.||+||++..|++|++++ |++
T Consensus 80 ~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi~ 158 (325)
T 3hhi_A 80 EAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GLV 158 (325)
T ss_dssp HHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CBC
T ss_pred HhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CCC
Confidence 98 8999999999999999999999999999999987 89999999999987446899999999999999998 999
Q ss_pred CCCCCCCc-cC----------CCccchh----h------------ccccccccceEEcCCchHHHHHHHHHc-CCeEEEE
Q 018968 219 TEDEYPYQ-AV----------QGTCSAA----Q------------KAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGI 270 (348)
Q Consensus 219 ~e~~yPY~-~~----------~~~c~~~----~------------~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~ 270 (348)
+|++|||. +. .+.|... . ......+..|. + .++++||++|++ |||+|+|
T Consensus 159 ~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~i 235 (325)
T 3hhi_A 159 SDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVAF 235 (325)
T ss_dssp BTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEEE
T ss_pred cccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEEE
Confidence 99999998 32 2567621 0 01122345666 4 589999999965 9999999
Q ss_pred EeccccccccCCceEecCCCC-CCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCCcccccCccceec
Q 018968 271 AAYTTEFKSYKEGIFNGVCGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPL 347 (348)
Q Consensus 271 ~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~yp~ 347 (348)
+++ ++|+.|++|||..+|+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+.|+|||++++++++
T Consensus 236 ~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~g~ 311 (325)
T 3hhi_A 236 DVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS-NGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGI 311 (325)
T ss_dssp EEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEEEE
T ss_pred Eec-cccccccCceecCCCCCCCCCEEEEEEEEEec-CCceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEEee
Confidence 998 79999999999988765 45999999999987 89999999999999999999999999999999999988654
No 12
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.2e-66 Score=465.62 Aligned_cols=212 Identities=50% Similarity=1.026 Sum_probs=198.5
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHc
Q 018968 135 DVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||++|.|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.+|+||++..|++|++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC-CCCCCCCCHHHHHHHHHHh
Confidence 689999999999999999999999999999999999999999999999999999999976 7899999999999999987
Q ss_pred CCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCCC
Q 018968 215 QGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
+|+++|++|||.+.++.|........++|.+|..++..++++||++|++|||++++++..++|+.|++|||+.+|+..++
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 160 (221)
T 1cqd_A 81 GGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISAN 160 (221)
T ss_dssp TSBCBTTTSCCCSSCCCCCSSSCCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCCCC
T ss_pred CCccccccCCccCCCCCcCCCCCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCcCC
Confidence 79999999999999999987655667899999999877899999999889999999997568999999999998988899
Q ss_pred cEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeC----CCcccccCccceecC
Q 018968 295 HAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRD----EGLCGIGTQSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~----~~~Cgi~~~~~yp~~ 348 (348)
|||+|||||++ +|++|||||||||++|||+|||||+|+ .|.|||+++++||++
T Consensus 161 HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 161 HALTVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred eEEEEEEEccc-CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 99999999998 889999999999999999999999998 489999999999975
No 13
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=3.2e-66 Score=462.81 Aligned_cols=212 Identities=52% Similarity=1.004 Sum_probs=197.6
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC-CCCCCCCCcHHHHHHHHHHc
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN-GNNGCGGGTMEKAFEYIIQN 214 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~~~ 214 (348)
||++||||++|.|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. ++.+|+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 69999999999999999999999999999999999999999999999999999999975 37899999999999999988
Q ss_pred CCCCCCCCCCCccCCCccchhhc-cccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCC
Q 018968 215 QGIATEDEYPYQAVQGTCSAAQK-AAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQL 293 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~c~~~~~-~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 293 (348)
+|+++|++|||.+.++.|..... ...+++.+|..++..++++|+++|.+|||++++++..++|+.|++|||+.+|+...
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 79999999999999999987633 34578999999987889999999977999999999757899999999999898889
Q ss_pred CcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCC---cccccCccceecC
Q 018968 294 DHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEG---LCGIGTQSSYPLA 348 (348)
Q Consensus 294 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---~Cgi~~~~~yp~~ 348 (348)
+|||+|||||++ ++++|||||||||++|||+|||||+|+.| +|||++.++||++
T Consensus 161 ~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 161 DHAVTIVGYGTE-GGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred ceEEEEEEEecC-CCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 999999999987 88999999999999999999999999976 9999999999985
No 14
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=2.8e-66 Score=461.22 Aligned_cols=210 Identities=51% Similarity=1.004 Sum_probs=196.7
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. +.+|+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA-SHGCNGGWMNNAFQYIITNG 79 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC-CCCCCCCCHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999999999999999975 78999999999999999877
Q ss_pred CCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCCCc
Q 018968 216 GIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDH 295 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~H 295 (348)
|+++|++|||.+.++.|.... ...++|.+|..++..++++|+++|++|||++++++...+|+.|++|||+.+|+..++|
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~H 158 (215)
T 1iwd_A 80 GIDTQQNYPYSAVQGSCKPYR-LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNH 158 (215)
T ss_dssp CBCBTTTSCCCSSCCCCCTTC-CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCCCE
T ss_pred CcccccccCccCCCCCCCCCC-CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcCCE
Confidence 999999999999999998754 3578899999998778999999998899999999984489999999999889888899
Q ss_pred EEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 296 AVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 296 av~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
||+|||||++ +|++|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 159 aV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 159 GVVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp EEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEEecc-CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 9999999998 8999999999999999999999999996 89999999999985
No 15
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=3.6e-66 Score=460.97 Aligned_cols=210 Identities=50% Similarity=0.946 Sum_probs=196.3
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|.|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.+|+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~yi~~~- 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYALEYVAKN- 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS-SCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccCC-CCCCCCCCHHHHHHHHHHh-
Confidence 69999999999999999999999999999999999999999999999999999999873 7899999999999999998
Q ss_pred CCCCCCCCCCccCCCccchhhc-cccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCCC
Q 018968 216 GIATEDEYPYQAVQGTCSAAQK-AAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~~~-~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|+.... ...++|.+|..++..++++|+++|++|||+++++++.++|+.|++|||+.+|++..+
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (216)
T 1ppo_A 79 GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVD 158 (216)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCCC
T ss_pred CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCCC
Confidence 8999999999999999987632 467889999999877899999999889999999996578999999999988988889
Q ss_pred cEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 295 HAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
|||+|||||++ +|++|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 159 HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 159 HAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred EEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 99999999998 7899999999999999999999999994 89999999999985
No 16
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=1.7e-66 Score=487.28 Aligned_cols=260 Identities=29% Similarity=0.617 Sum_probs=210.5
Q ss_pred HHHHHHHHHhCCCCceEEEcccCCCCCHHHHHHhhhccCCCCCCCCCCCCccccccCCCCCCCCCeeecCCC----CCCC
Q 018968 74 NLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDK----KAVT 149 (348)
Q Consensus 74 n~~~I~~~N~~~~~s~~~g~N~faDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~ 149 (348)
+.++|++||++ +.+|++++| |+|++.||++. ++|.++..... ...+.... ..+||++||||++ +.|+
T Consensus 11 ~~~~i~~~N~~-~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~----~~~~~~~~--~~~lP~s~DwR~~~~~c~~vt 81 (317)
T 3pbh_A 11 SDELVNYVNKR-NTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKP----PQRVMFTE--DLKLPASFDAREQWPQCPTIK 81 (317)
T ss_dssp CHHHHHHHHHH-TCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCC----SEEECCCS--CCCCCSSEEHHHHCTTCGGGT
T ss_pred cHHHHHHHHCC-CCCeEEeec-cccCCHHHHHH-HcCCCCCcccc----Cccccccc--ccCCCCCEechhccCCCCCcC
Confidence 46789999987 489999999 99988877654 56655433211 11111111 2489999999987 6799
Q ss_pred ccCCCCCCcchHHHHHHHHHHHHHHHhCCC--CcCCCHHHHhhhcC-CCCCCCCCCcHHHHHHHHHHcCCCCCCCCC---
Q 018968 150 PIKDQQECGCCWAFSAVAAVEGITKISGAN--LIQLSEQQLVDCST-NGNNGCGGGTMEKAFEYIIQNQGIATEDEY--- 223 (348)
Q Consensus 150 pV~dQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS~q~l~dc~~-~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y--- 223 (348)
||||||.||||||||++++||++++++++. .+.||+|+|+||+. ..+.||+||++..|++|++++ |+++|++|
T Consensus 82 pVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~ 160 (317)
T 3pbh_A 82 EIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESH 160 (317)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCC
T ss_pred CccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCC
Confidence 999999999999999999999999999874 78999999999987 346899999999999999998 99999888
Q ss_pred ----CCcc---------CCCccchhhc--------ccc---------ccccceEEcCCchHHHHHHHHHc-CCeEEEEEe
Q 018968 224 ----PYQA---------VQGTCSAAQK--------AAA---------AKISNYEEVPSGDEQALLKAVSM-QPVSIGIAA 272 (348)
Q Consensus 224 ----PY~~---------~~~~c~~~~~--------~~~---------~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~ 272 (348)
||.. ..+.|..... ... ........++ .++++|+++|.+ |||+|+|++
T Consensus 161 ~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~ 239 (317)
T 3pbh_A 161 VGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSV 239 (317)
T ss_dssp CBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEe
Confidence 9984 3455642100 000 0111223454 478999999975 999999999
Q ss_pred ccccccccCCceEecCCCCC-CCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCCcccccCcccee
Q 018968 273 YTTEFKSYKEGIFNGVCGTQ-LDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYP 346 (348)
Q Consensus 273 ~~~~f~~y~~Giy~~~~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~yp 346 (348)
+ ++|+.|++|||..+|+.. ++|||+|||||++ +|++|||||||||++|||+|||||+|+.|+|||++.++.+
T Consensus 240 ~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~ 312 (317)
T 3pbh_A 240 Y-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAG 312 (317)
T ss_dssp E-GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEC
T ss_pred c-ccccCCCCcEEccCCCCCCCCEEEEEEEEEEe-CCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEee
Confidence 8 799999999999988754 4999999999998 8999999999999999999999999999999999988754
No 17
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=7.1e-66 Score=459.69 Aligned_cols=210 Identities=51% Similarity=0.977 Sum_probs=196.1
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|.|+||||||.||||||||++++||+++++++++.++||+|+|+||... +.+|+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~- 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKH-SYGCKGGYQTTSLQYVANN- 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcCC-CCCCCCCCHHHHHHHHHHc-
Confidence 69999999999999999999999999999999999999999999999999999999853 7899999999999999998
Q ss_pred CCCCCCCCCCccCCCccchhhc-cccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCCC
Q 018968 216 GIATEDEYPYQAVQGTCSAAQK-AAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~~~-~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|+.... ...++|.+|..++.+++++|+++|++|||+++++++.++|+.|++|||+.+|++.++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (218)
T 1yal_A 79 GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLD 158 (218)
T ss_dssp CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCCC
Confidence 8999999999999999987632 457889999999877899999999889999999996578999999999988988889
Q ss_pred cEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 295 HAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 159 HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 159 HAVTAVGYGTS-DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp EEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred EEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 99999999998 7899999999999999999999999984 89999999999975
No 18
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=4.6e-66 Score=460.38 Aligned_cols=211 Identities=45% Similarity=0.922 Sum_probs=197.3
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. +.+|+||++..|++|+++++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~-~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE-NDGCGGGYMTNAFQYVQKNR 79 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999999999999999974 88999999999999998888
Q ss_pred CCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecC-CC-CC
Q 018968 216 GIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGV-CG-TQ 292 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~-~~-~~ 292 (348)
|+++|++|||.+.++.|+........++.+|..++..++++||++|++ |||++++++..++|+.|++|||..+ |+ ..
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 159 (215)
T 3kwz_A 80 GIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDN 159 (215)
T ss_dssp CEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTTC
T ss_pred CccccccCCCccCCCccccCCCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCCh
Confidence 999999999999999998766666788999999987789999999987 9999999997568999999999875 64 57
Q ss_pred CCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC-CcccccCccceecC
Q 018968 293 LDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE-GLCGIGTQSSYPLA 348 (348)
Q Consensus 293 ~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~yp~~ 348 (348)
++|||+|||||++ ++++|||||||||++|||+|||||+|+. |+|||++.++||++
T Consensus 160 ~~HaV~iVGyg~~-~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 160 LNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215 (215)
T ss_dssp CCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEECC
T ss_pred hhCEEEEEEEecc-CCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeeeC
Confidence 8999999999998 8899999999999999999999999996 99999999999985
No 19
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=1.2e-65 Score=461.40 Aligned_cols=214 Identities=56% Similarity=1.061 Sum_probs=197.9
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHc
Q 018968 135 DVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+...+.+|+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986447899999999999999987
Q ss_pred CCCCCCCCCCCccCCCccchh-hccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCC
Q 018968 215 QGIATEDEYPYQAVQGTCSAA-QKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQL 293 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~c~~~-~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 293 (348)
+|+++|++|||.+..+.|... .....++|.+|..++.++++.|+++|.+|||++++++..++|+.|++|||+.+|+...
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~~ 160 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTEL 160 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCCC
Confidence 799999999999999999875 3345688999999987789999999999999999999547899999999998898888
Q ss_pred CcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 294 DHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 294 ~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
+|||+|||||++.+|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 161 ~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 161 DHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp CEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 99999999999844899999999999999999999999994 89999999999974
No 20
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=4.2e-66 Score=461.62 Aligned_cols=212 Identities=45% Similarity=0.922 Sum_probs=197.7
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhc-CC-CCCCCCCCcHHHHHHHHHH
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCS-TN-GNNGCGGGTMEKAFEYIIQ 213 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~-~~-~~~gc~GG~~~~a~~~~~~ 213 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+ .. ++.+|+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 32 4789999999999999987
Q ss_pred cCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecC-CCC
Q 018968 214 NQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGV-CGT 291 (348)
Q Consensus 214 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~-~~~ 291 (348)
++|+++|++|||.+..+.|.........++.+|..++..++++||++|++ |||++++++..++|+.|++|||..+ |..
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 161 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ 161 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCCS
T ss_pred hCCcCcccccCccCCCCcccCCCccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCCc
Confidence 66999999999999999998776667788999999987789999999987 9999999998568999999999875 777
Q ss_pred CCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC-CcccccCccceecC
Q 018968 292 QLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE-GLCGIGTQSSYPLA 348 (348)
Q Consensus 292 ~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~yp~~ 348 (348)
.++|||+|||||++ +|++|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 162 ~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 162 NVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 218 (218)
T ss_dssp CCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred ccCcEEEEEEEecc-CCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeeeC
Confidence 88999999999998 7899999999999999999999999996 99999999999985
No 21
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=1.3e-65 Score=468.36 Aligned_cols=214 Identities=51% Similarity=1.044 Sum_probs=198.5
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHc
Q 018968 135 DVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||++|.|+||||||.||||||||++++||+++++++++.++||+|+|+||+...+.+|+||++..|++|+.++
T Consensus 3 ~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~~ 82 (262)
T 2fo5_A 3 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNN 82 (262)
T ss_dssp CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHHT
T ss_pred CCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 78999999999999999999999999999999999999999999999999999999996447899999999999999987
Q ss_pred CCCCCCCCCCCccCCCccchhh---ccc-cccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCC
Q 018968 215 QGIATEDEYPYQAVQGTCSAAQ---KAA-AAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCG 290 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~c~~~~---~~~-~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~ 290 (348)
+|+++|++|||.+..+.|.... ... .++|.+|..++.++++.|+++|++|||+++++++.++|+.|++|||+.+|+
T Consensus 83 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c~ 162 (262)
T 2fo5_A 83 GGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGECG 162 (262)
T ss_dssp TCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCC
T ss_pred CCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCCC
Confidence 7999999999999999998764 445 688999999987789999999988999999999756899999999998898
Q ss_pred CCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 291 TQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 291 ~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
...+|||+|||||++.+|++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 163 ~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 163 TELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 88899999999999856899999999999999999999999985 56999999999974
No 22
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=8e-66 Score=461.71 Aligned_cols=215 Identities=43% Similarity=0.924 Sum_probs=200.4
Q ss_pred CCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC-CCCCCCCCcHHHHHHHHH
Q 018968 134 TDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN-GNNGCGGGTMEKAFEYII 212 (348)
Q Consensus 134 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~ 212 (348)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|++|+.. ++.+|+||++..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999875 478999999999999999
Q ss_pred HcCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCC
Q 018968 213 QNQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQ 292 (348)
Q Consensus 213 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 292 (348)
+++|+++|++|||.+.++.|+........++.+|..++..++++|+++|.+|||++++++..++|+.|++|||++.|+..
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~~ 164 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQSCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGTD 164 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGGGSCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCCC
T ss_pred HhCCccccccCCCcCCCCCCCcCCCCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCCc
Confidence 85599999999999999999877666677899999998788999999999999999999985589999999999778888
Q ss_pred CCcEEEEEEEeecC-CCccEEEEEcCCCCCCCCCceEEEEeCC---CcccccCccceecC
Q 018968 293 LDHAVTIVGFGTTE-DGANYWLIKNSWGDTWGDAGYMKILRDE---GLCGIGTQSSYPLA 348 (348)
Q Consensus 293 ~~Hav~iVGyg~~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~---~~Cgi~~~~~yp~~ 348 (348)
++|||+|||||++. ++++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 165 ~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 165 LDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEEC
T ss_pred cCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeeeC
Confidence 99999999999875 7889999999999999999999999997 99999999999985
No 23
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=2.6e-65 Score=452.65 Aligned_cols=205 Identities=51% Similarity=1.031 Sum_probs=192.1
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|.|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. +.+|+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~~ 79 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK-NHGCLGGAFVFAYQYIINNG 79 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCC-CCCCCCCCHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999999999999999864 78999999999999999877
Q ss_pred CCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCCCc
Q 018968 216 GIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDH 295 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~H 295 (348)
|+++|++|||.+..+.|+. ....+++.+|..++..++++|+++|++|||+++++++..+|+.|++|||+.+|+..++|
T Consensus 80 Gi~~e~~yPY~~~~~~C~~--~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~H 157 (208)
T 1o0e_A 80 GIDTQANYPYKAVQGPCQA--ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNH 157 (208)
T ss_dssp CBCBTTTSCCCSSCCCCCC--CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCCE
T ss_pred CcCcccccCccCCCCcCCC--CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcCCE
Confidence 9999999999999999986 44578899999998778999999998899999999974589999999999889888899
Q ss_pred EEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC--CcccccCccceecC
Q 018968 296 AVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE--GLCGIGTQSSYPLA 348 (348)
Q Consensus 296 av~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~--~~Cgi~~~~~yp~~ 348 (348)
||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 158 aV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 158 GVTIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPTK 207 (208)
T ss_dssp EEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEeCC-----CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeeec
Confidence 999999987 7999999999999999999999996 99999999999985
No 24
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=3.6e-65 Score=453.21 Aligned_cols=206 Identities=48% Similarity=0.894 Sum_probs=192.5
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|.|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.+|+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~yi~~~- 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRR-SYGCNGGYPWSALQLVAQY- 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHT-
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCCC-CCCCCCCCHHHHHHHHHHh-
Confidence 69999999999999999999999999999999999999999999999999999999974 7899999999999999988
Q ss_pred CCCCCCCCCCccCCCccchhh-ccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCCC
Q 018968 216 GIATEDEYPYQAVQGTCSAAQ-KAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~~-~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|+... ....+++.+|..++..++++|+++|++|||+++++++..+|+.|++|||+.+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~~ 158 (212)
T 2cio_A 79 GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD 158 (212)
T ss_dssp CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCC
T ss_pred CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCCC
Confidence 899999999999999998764 3557889999999877899999999889999999997458999999999988988889
Q ss_pred cEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 295 HAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
|||+|||||+ +|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 159 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 159 HAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred EEEEEEEecC-----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 9999999997 7999999999999999999999996 99999999999985
No 25
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=2.7e-65 Score=456.78 Aligned_cols=212 Identities=46% Similarity=0.934 Sum_probs=194.2
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC-CCCCCCCCcHHHHHHHHHHc
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN-GNNGCGGGTMEKAFEYIIQN 214 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~~~ 214 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. ++.+|+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 69999999999999999999999999999999999999999999999999999999864 47899999999999999755
Q ss_pred CCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecC-CCC-
Q 018968 215 QGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGV-CGT- 291 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~-~~~- 291 (348)
.|+++|++|||.+.++.|+........++++|..++. ++++||++|++ |||++++++..++|+.|++|||+.+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~~ 159 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSE 159 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCGGGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCSS
T ss_pred CCcccccccCCcccCcCccCCCCCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCCC
Confidence 5999999999999999998765556788999999986 89999999987 9999999997558999999999876 774
Q ss_pred CCCcEEEEEEEee---cCCCccEEEEEcCCCCCCCCCceEEEEeCC-CcccccCccceecC
Q 018968 292 QLDHAVTIVGFGT---TEDGANYWLIKNSWGDTWGDAGYMKILRDE-GLCGIGTQSSYPLA 348 (348)
Q Consensus 292 ~~~Hav~iVGyg~---~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~yp~~ 348 (348)
.++|||+|||||+ ++++++|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 160 ~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 160 DMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220 (220)
T ss_dssp CCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred CCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeeeC
Confidence 7899999999994 337899999999999999999999999996 89999999999985
No 26
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.7e-65 Score=458.65 Aligned_cols=210 Identities=48% Similarity=0.935 Sum_probs=190.2
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.+|+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX-XXXXXGGDADDAFRWVITNG 79 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHHHHHT
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc-ccccCCCCHHHHHHHHHHcC
Confidence 69999999999999999999999999999999999999999999999999999999986 88999999999999999888
Q ss_pred CCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCC-ceEec-CCCC--
Q 018968 216 GIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKE-GIFNG-VCGT-- 291 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~-Giy~~-~~~~-- 291 (348)
|+++|++|||.+.++.|...... .++|.+|..++ .++++|+++|.+|||+++++++..+|+.|++ |||+. +|+.
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~-~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~ 157 (222)
T 3u8e_A 80 GIASDANYPYTGVDGTCDLNKPI-AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDP 157 (222)
T ss_dssp CBCBTTTSCCCSSCCCCCCCSCC-CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCG
T ss_pred CccchhcCCCcccCCccccCCCC-eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCCC
Confidence 99999999999999999876444 78899999998 7899999999889999999998558999999 99998 6875
Q ss_pred -CCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCC----cccccCccceecC
Q 018968 292 -QLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEG----LCGIGTQSSYPLA 348 (348)
Q Consensus 292 -~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~----~Cgi~~~~~yp~~ 348 (348)
.++|||+|||||++.++++|||||||||++|||+|||||+|+.| +|||+++++||++
T Consensus 158 ~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 158 ATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp GGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 68999999999998338999999999999999999999999976 9999999999975
No 27
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=7e-65 Score=452.14 Aligned_cols=208 Identities=38% Similarity=0.761 Sum_probs=192.1
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|.|+||||||.||||||||++++||++++++++..++||+|+|+||+.. +.+|+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~i~~~~ 79 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM-DKACMGGLPSNAYSAIKNLG 79 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS-SCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhc
Confidence 69999999999999999999999999999999999999999999999999999999875 78999999999999999877
Q ss_pred CCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecC---CCC
Q 018968 216 GIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGV---CGT 291 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~---~~~ 291 (348)
|+++|++|||.+..+.|+........++.++..++. ++++||++|.+ |||++++++. .|++|++|||+.+ |+.
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~~ 156 (214)
T 1m6d_A 80 GLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCSP 156 (214)
T ss_dssp CBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSCT
T ss_pred CcccccCcCcCCCCCcCCCCcccceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCCC
Confidence 999999999999999998765555678999999974 78999999976 9999999987 5999999999863 664
Q ss_pred -CCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCCcccccCccceecC
Q 018968 292 -QLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA 348 (348)
Q Consensus 292 -~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~yp~~ 348 (348)
.++|||+|||||++ +|++|||||||||++|||+|||||+|+.|+|||++.++||++
T Consensus 157 ~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 157 WLIDHAVLLVGYGQR-SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp TCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred CcCCEEEEEEEEeec-CCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 57999999999998 889999999999999999999999999999999999999985
No 28
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=2.8e-65 Score=456.88 Aligned_cols=210 Identities=41% Similarity=0.895 Sum_probs=195.7
Q ss_pred CCCeeecCCCC-CCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC-CCCCCCCCcHHHHHHHHHH
Q 018968 136 VPTSLDWRDKK-AVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN-GNNGCGGGTMEKAFEYIIQ 213 (348)
Q Consensus 136 lP~~~Dwr~~g-~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~~~a~~~~~~ 213 (348)
||++||||++| +|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. .+.+|+||++..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 69999999998 899999999999999999999999999999999999999999999864 4789999999999999998
Q ss_pred cCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecC-CCC
Q 018968 214 NQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGV-CGT 291 (348)
Q Consensus 214 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~-~~~ 291 (348)
++|+++|++|||.+..+.|+........++.+|..++..++++||++|.+ |||+++++++ ++|+.|++|||..+ |..
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~~ 159 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCHK 159 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCCC
T ss_pred cCCcCcccccCccCCCCCCCCCCCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCCC
Confidence 87999999999999999998776666788999999987889999999976 9999999998 69999999999875 643
Q ss_pred ---CCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCCcccccCccceec
Q 018968 292 ---QLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPL 347 (348)
Q Consensus 292 ---~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~yp~ 347 (348)
.++|||+|||||++ ++++|||||||||++|||+|||||+|+.|+|||+++++||+
T Consensus 160 ~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~ 217 (220)
T 8pch_A 160 TPDKVNHAVLAVGYGEE-NGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 217 (220)
T ss_dssp STTTCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEE
T ss_pred CCCcCCcEEEEEEEEcc-CCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEe
Confidence 57999999999998 78999999999999999999999999999999999999997
No 29
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.1e-64 Score=459.37 Aligned_cols=210 Identities=41% Similarity=0.862 Sum_probs=195.3
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHc
Q 018968 135 DVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.+|+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~~-~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDE-SEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SBTTTBCCHHHHHHHHHHT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcCC-CCCCCCCCHHHHHHHHHHh
Confidence 489999999999999999999999999999999999999999999999999999999873 7899999999999999987
Q ss_pred CCCCCCCCCCCccCCCccchhhccccccccce---EEcCCchHHHHHHHHHc----CCeEEEEEeccccccccCCceEec
Q 018968 215 QGIATEDEYPYQAVQGTCSAAQKAAAAKISNY---EEVPSGDEQALLKAVSM----QPVSIGIAAYTTEFKSYKEGIFNG 287 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y---~~~~~~~~~~i~~al~~----GPV~v~~~~~~~~f~~y~~Giy~~ 287 (348)
+|+++|++|||.+.++.|........+++.+| ..++..++++|+++|++ |||++++++ ++|+.|++|||+.
T Consensus 80 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~~ 157 (246)
T 2b1m_A 80 GGIASEADYPYKARDGKCKANEIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYDG 157 (246)
T ss_dssp TCBCBTTTSCCCSSCCCCCGGGCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEECC
T ss_pred CCcCccccccccCCCCcCcCCCCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeecC
Confidence 79999999999999999987755567889999 88887789999999987 999999999 5899999999988
Q ss_pred -CCCCC--CCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 288 -VCGTQ--LDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 288 -~~~~~--~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
.|+.. ++|||+|||||++ +|++|||||||||++|||+|||||+|+. |+|||++.++||++
T Consensus 158 ~~c~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 158 GNCSSPYGINHFVLIVGYGSE-DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp TTCCSSCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred CCCCCCCcCceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 58765 8999999999998 8999999999999999999999999997 99999999999974
No 30
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=8.2e-65 Score=451.42 Aligned_cols=206 Identities=49% Similarity=0.978 Sum_probs=192.8
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|.|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.+|+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~- 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERR-SHGCDGGYQTTSLQYVVDN- 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCC-CCCCCCCCHHHHHHHHHHh-
Confidence 69999999999999999999999999999999999999999999999999999999974 7899999999999999999
Q ss_pred CCCCCCCCCCccCCCccchhhc-cccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCCC
Q 018968 216 GIATEDEYPYQAVQGTCSAAQK-AAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~~~-~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|+.... ...+++.+|..++..++++|+++|.+|||+++++++.++|+.|++|||+.+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 158 (214)
T 2bdz_A 79 GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTD 158 (214)
T ss_dssp CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCCC
Confidence 9999999999999899987643 456889999999878899999999889999999997568999999999998988899
Q ss_pred cEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 295 HAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
|||+|||||+ +|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 159 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 159 HAVTAVGYGK-----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp EEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred eEEEEEEcCC-----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 9999999987 7999999999999999999999985 89999999999974
No 31
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=6.9e-65 Score=451.89 Aligned_cols=206 Identities=48% Similarity=0.950 Sum_probs=192.4
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcC
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQ 215 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~ 215 (348)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. +.+|+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~- 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERR-SYGCRGGFPLYALQYVANS- 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH-
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCC-CCCCCCCCHHHHHHHHHHc-
Confidence 69999999999999999999999999999999999999999999999999999999985 8899999999999999999
Q ss_pred CCCCCCCCCCccCCCccchh-hccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCCC
Q 018968 216 GIATEDEYPYQAVQGTCSAA-QKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQLD 294 (348)
Q Consensus 216 Gi~~e~~yPY~~~~~~c~~~-~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 294 (348)
|+++|++|||.+..+.|... .....+++.+|..++..+++.+++++.+|||+++++++.++|+.|++|||+.+|+..++
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~ 158 (213)
T 3ioq_A 79 GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSID 158 (213)
T ss_dssp CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCC
T ss_pred CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCccC
Confidence 99999999999999999874 34567889999999877788888888889999999997678999999999998888899
Q ss_pred cEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCC----CcccccCccceecC
Q 018968 295 HAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDE----GLCGIGTQSSYPLA 348 (348)
Q Consensus 295 Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~yp~~ 348 (348)
|||+|||||+ +|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 159 HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 159 HAVAAVGYGN-----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp EEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred ceEEEEecCC-----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 9999999985 7999999999999999999999996 89999999999985
No 32
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.1e-64 Score=451.28 Aligned_cols=208 Identities=38% Similarity=0.811 Sum_probs=188.5
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHc-
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQN- 214 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~- 214 (348)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.. +.+|+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~~ 79 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAFEWIVQEN 79 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSS-SCGGGCCCHHHHHHHHHHHS
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCC-CCCCCCCCHHHHHHHHHHhc
Confidence 69999999999999999999999999999999999999999999999999999999875 7899999999999999985
Q ss_pred -CCCCCCCCCCCccCCC---ccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecCC
Q 018968 215 -QGIATEDEYPYQAVQG---TCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVC 289 (348)
Q Consensus 215 -~Gi~~e~~yPY~~~~~---~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~ 289 (348)
+|+++|++|||....+ .|.........++.+|..++. ++++||++|++ |||++++++. +|+.|++|||+...
T Consensus 80 ~gGi~~e~~yPY~~~~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~~--~f~~Y~~Giy~~~~ 156 (215)
T 3i06_A 80 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDAS--SWMTYTGGVMTSCV 156 (215)
T ss_dssp TTEEEC-CCSCCCCTTSCCCCCCCSSCCEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECCT--TGGGCCSSEECSCC
T ss_pred cccccccCccCCcCCCCCCCccccCCcccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEch--HHhcCCCCcccCCC
Confidence 4799999999997543 787665555678999999974 78999999976 9999999984 89999999998633
Q ss_pred CCCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCCcccccCccceecC
Q 018968 290 GTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA 348 (348)
Q Consensus 290 ~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~yp~~ 348 (348)
...++|||+|||||++ ++++|||||||||++|||+|||||+|+.|+|||+++++||++
T Consensus 157 ~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 157 SEQLDHGVLLVGYNDS-AAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp CSCCCEEEEEEEEESS-SSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEE
T ss_pred CCccCcEEEEEEEecc-CCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEec
Confidence 4667999999999987 889999999999999999999999999999999999999974
No 33
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=1e-64 Score=458.65 Aligned_cols=210 Identities=45% Similarity=0.865 Sum_probs=195.2
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHc
Q 018968 135 DVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQN 214 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~ 214 (348)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|++|+.. +.+|+||++..|++|+.++
T Consensus 17 ~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~-~~gC~GG~~~~a~~yi~~~ 95 (241)
T 2oul_A 17 FDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK-NYGCNGGLINNAFEDMIEL 95 (241)
T ss_dssp CCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT-SCTTBCBCHHHHHHHHHHT
T ss_pred cCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC-CCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999999999999999975 7899999999999999986
Q ss_pred CCCCCCCCCCCccCCCc-cchhhccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCCC
Q 018968 215 QGIATEDEYPYQAVQGT-CSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQL 293 (348)
Q Consensus 215 ~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 293 (348)
.|+++|++|||.+..+. |+.......++|.+|..++..++++||++| |||+++++++ ++|+.|++|||+..|+..+
T Consensus 96 ~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~~~ 172 (241)
T 2oul_A 96 GGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECGDQL 172 (241)
T ss_dssp TSBCBTTSSCCCTTSCCCCCTTSSSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBCSSC
T ss_pred CCcCccccCCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCCCCC
Confidence 69999999999998888 987655567899999999877899999999 9999999997 7999999999998887669
Q ss_pred CcEEEEEEEeecC---------CCccEEEEEcCCCCCCCCCceEEEEeCCCc----ccccCccceecC
Q 018968 294 DHAVTIVGFGTTE---------DGANYWLIKNSWGDTWGDAGYMKILRDEGL----CGIGTQSSYPLA 348 (348)
Q Consensus 294 ~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----Cgi~~~~~yp~~ 348 (348)
+|||+|||||++. ++++|||||||||++|||+|||||+|+.|. |||++.++||++
T Consensus 173 ~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 173 NHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp CEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 9999999999873 278999999999999999999999999766 999999999975
No 34
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1.4e-64 Score=458.36 Aligned_cols=211 Identities=40% Similarity=0.802 Sum_probs=195.6
Q ss_pred CCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHH
Q 018968 134 TDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQ 213 (348)
Q Consensus 134 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~ 213 (348)
.+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|++|+.. +.+|+||++..|++|+.+
T Consensus 18 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~-~~gC~GG~~~~a~~y~~~ 96 (243)
T 3bwk_A 18 KLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK-NNGCYGGYITNAFDDMID 96 (243)
T ss_dssp CCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT-SCGGGCCCHHHHHHHHHH
T ss_pred ccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC-CCCCCCCCHHHHHHHHHH
Confidence 3799999999999999999999999999999999999999999999999999999999975 789999999999999998
Q ss_pred cCCCCCCCCCCCccCCCc-cchhhccccccccceEEcCCchHHHHHHHHHcCCeEEEEEeccccccccCCceEecCCCCC
Q 018968 214 NQGIATEDEYPYQAVQGT-CSAAQKAAAAKISNYEEVPSGDEQALLKAVSMQPVSIGIAAYTTEFKSYKEGIFNGVCGTQ 292 (348)
Q Consensus 214 ~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~GPV~v~~~~~~~~f~~y~~Giy~~~~~~~ 292 (348)
+.|+++|++|||.+..+. |+.......++|.+|..++..++++||++| |||+++++++ ++|+.|++|||+..|+..
T Consensus 97 ~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~~ 173 (243)
T 3bwk_A 97 LGGLCSQDDYPYVSNLPETCNLKRCNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGECGAA 173 (243)
T ss_dssp TTSBCBTTTSCCCTTSCCCCCGGGCSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCCCSS
T ss_pred hCCcccccccCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCCCCc
Confidence 669999999999998888 987655667899999999877899999999 9999999997 799999999998888766
Q ss_pred CCcEEEEEEEeecC---------CCccEEEEEcCCCCCCCCCceEEEEeCCCc----ccccCccceecC
Q 018968 293 LDHAVTIVGFGTTE---------DGANYWLIKNSWGDTWGDAGYMKILRDEGL----CGIGTQSSYPLA 348 (348)
Q Consensus 293 ~~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~----Cgi~~~~~yp~~ 348 (348)
++|||+|||||++. .|++|||||||||++|||+|||||+|+.|. |||+++++||++
T Consensus 174 ~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 174 PNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp CCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 99999999999873 278999999999999999999999999766 999999999975
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=2.5e-64 Score=451.29 Aligned_cols=210 Identities=32% Similarity=0.590 Sum_probs=193.3
Q ss_pred CCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHH
Q 018968 134 TDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQ 213 (348)
Q Consensus 134 ~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~ 213 (348)
.+||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+. +.+|+||++..|++|+++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~~ 85 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYIQH 85 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHHHHHHHHH
Confidence 379999999999999999999999999999999999999999999999999999999997 789999999999999999
Q ss_pred cCCCCCCCCCCCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc--CCeEEEEEec-cccccccCCceEec-CC
Q 018968 214 NQGIATEDEYPYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM--QPVSIGIAAY-TTEFKSYKEGIFNG-VC 289 (348)
Q Consensus 214 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~--GPV~v~~~~~-~~~f~~y~~Giy~~-~~ 289 (348)
+ |+++|++|||.+..+.|+ ......+++.+|..++..++++||++|.+ |||++++++. .++|+.|++|||.. .|
T Consensus 86 ~-Gi~~e~~yPY~~~~~~C~-~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~ 163 (222)
T 3f5v_A 86 N-GVVQESYYRYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDN 163 (222)
T ss_dssp H-CEEBGGGSCCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCC
T ss_pred c-CCCchhhCCCcccCCCcc-CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCC
Confidence 8 999999999999999998 44556788999999987889999999976 8999999984 26899999998754 33
Q ss_pred -CCCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCCcccccCccceecC
Q 018968 290 -GTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEGLCGIGTQSSYPLA 348 (348)
Q Consensus 290 -~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~yp~~ 348 (348)
...++|||+|||||++ +|++|||||||||++|||+|||||+|+.|+|||+++++||+.
T Consensus 164 ~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 164 GYQPNYHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 222 (222)
T ss_dssp SSSCEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEC
T ss_pred CCCccCcEEEEEEEecc-CCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEeC
Confidence 4568999999999998 899999999999999999999999999999999999999974
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=8e-60 Score=432.84 Aligned_cols=208 Identities=30% Similarity=0.671 Sum_probs=178.6
Q ss_pred CCCCeeecCCC----CCCCccCCCCCCcchHHHHHHHHHHHHHHHhCC--CCcCCCHHHHhhhcCC-CCCCCCCCcHHHH
Q 018968 135 DVPTSLDWRDK----KAVTPIKDQQECGCCWAFSAVAAVEGITKISGA--NLIQLSEQQLVDCSTN-GNNGCGGGTMEKA 207 (348)
Q Consensus 135 ~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~dc~~~-~~~gc~GG~~~~a 207 (348)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||+|+|+||+.. .+.+|+||++..|
T Consensus 6 ~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a 85 (266)
T 3cbj_A 6 KLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEA 85 (266)
T ss_dssp CCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHHH
T ss_pred CCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHHH
Confidence 79999999886 789999999999999999999999999999875 4789999999999863 3689999999999
Q ss_pred HHHHHHcCCCCC-------CCCCCCc---------cCCCccchh---------h---------ccccccccceEEcCCch
Q 018968 208 FEYIIQNQGIAT-------EDEYPYQ---------AVQGTCSAA---------Q---------KAAAAKISNYEEVPSGD 253 (348)
Q Consensus 208 ~~~~~~~~Gi~~-------e~~yPY~---------~~~~~c~~~---------~---------~~~~~~i~~y~~~~~~~ 253 (348)
++|+.++ |+++ |++|||. +..+.|... . ....+.+ .+..++ .+
T Consensus 86 ~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~-~~~~v~-~~ 162 (266)
T 3cbj_A 86 WNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGY-NSYSVS-NS 162 (266)
T ss_dssp HHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBS-CCEECC-SC
T ss_pred HHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeee-eeEEeC-CC
Confidence 9999987 9999 9999998 344556321 0 0011222 334565 57
Q ss_pred HHHHHHHHHc-CCeEEEEEeccccccccCCceEecCCCCC-CCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEE
Q 018968 254 EQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVCGTQ-LDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKIL 331 (348)
Q Consensus 254 ~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~ 331 (348)
+++||++|.+ |||+++++++ ++|+.|++|||+.+|+.. ++|||+|||||++ +|++|||||||||++|||+|||||+
T Consensus 163 ~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~ 240 (266)
T 3cbj_A 163 EKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKIL 240 (266)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEeccc-CCceEEEEEcCCCCccCCCCEEEEE
Confidence 8999999976 9999999998 799999999999877653 5999999999997 8999999999999999999999999
Q ss_pred eCCCcccccCccceec
Q 018968 332 RDEGLCGIGTQSSYPL 347 (348)
Q Consensus 332 ~~~~~Cgi~~~~~yp~ 347 (348)
|+.|.|||++.+++++
T Consensus 241 rg~n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 241 RGQDHCGIESEVVAGI 256 (266)
T ss_dssp CSSCGGGTTTSCEECC
T ss_pred cCCCcccccCceEEEE
Confidence 9999999999999875
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=2.5e-59 Score=426.83 Aligned_cols=208 Identities=35% Similarity=0.738 Sum_probs=176.6
Q ss_pred CCCCeeecCCC----CCCCccCCCCCCcchHHHHHHHHHHHHHHHhCC--CCcCCCHHHHhhhcCCCCCCCCCCcHHHHH
Q 018968 135 DVPTSLDWRDK----KAVTPIKDQQECGCCWAFSAVAAVEGITKISGA--NLIQLSEQQLVDCSTNGNNGCGGGTMEKAF 208 (348)
Q Consensus 135 ~lP~~~Dwr~~----g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~ 208 (348)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||+|+|+||+...+.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 68999999997 689999999999999999999999999999876 679999999999986556899999999999
Q ss_pred HHHHHcCCCCCCCCC-------CCc---------cCCCccchh--------------hccccc----cccceEEcCCchH
Q 018968 209 EYIIQNQGIATEDEY-------PYQ---------AVQGTCSAA--------------QKAAAA----KISNYEEVPSGDE 254 (348)
Q Consensus 209 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~c~~~--------------~~~~~~----~i~~y~~~~~~~~ 254 (348)
+|++++ |+++|++| ||. +..+.|... ...... .......++ .++
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-NDE 159 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SCH
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-CcH
Confidence 999998 99999888 996 344455321 000000 111223454 478
Q ss_pred HHHHHHHHc-CCeEEEEEeccccccccCCceEecCCCC-CCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEe
Q 018968 255 QALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVCGT-QLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILR 332 (348)
Q Consensus 255 ~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~~~-~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~ 332 (348)
++||++|.+ |||+++++++ ++|+.|++|||..++.. .++|||+|||||++ ++++|||||||||++|||+|||||+|
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~r 237 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVE-NKAPYWLIANSWNEDWGENGYFRIVR 237 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeec-CCeeEEEEEeCCCCCcccCCeEEEEc
Confidence 999999976 9999999998 79999999999987654 45999999999997 89999999999999999999999999
Q ss_pred CCCcccccCcccee
Q 018968 333 DEGLCGIGTQSSYP 346 (348)
Q Consensus 333 ~~~~Cgi~~~~~yp 346 (348)
+.|+|||+++++..
T Consensus 238 g~n~CgI~~~~~~~ 251 (254)
T 3qsd_A 238 GRDECSIESEVTAG 251 (254)
T ss_dssp SSCGGGTTSSEEEE
T ss_pred CCCeecCCCceEee
Confidence 99999999988754
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.9e-59 Score=432.00 Aligned_cols=208 Identities=28% Similarity=0.641 Sum_probs=184.8
Q ss_pred CCCCCCeeecCCC---CCCCccCCCC---CCcchHHHHHHHHHHHHHHHhCC-C--CcCCCHHHHhhhcCCCCCCCCCCc
Q 018968 133 MTDVPTSLDWRDK---KAVTPIKDQQ---ECGCCWAFSAVAAVEGITKISGA-N--LIQLSEQQLVDCSTNGNNGCGGGT 203 (348)
Q Consensus 133 ~~~lP~~~Dwr~~---g~v~pV~dQg---~cGsCwAfA~~~~le~~~~~~~~-~--~~~lS~q~l~dc~~~~~~gc~GG~ 203 (348)
..+||++||||++ ++|+|||||| .||||||||++++||++++++++ . .++||+|+|+||+. ..+|+||+
T Consensus 33 ~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~~gC~GG~ 110 (277)
T 1deu_A 33 PADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--AGSCEGGN 110 (277)
T ss_dssp GGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--SEETBEEC
T ss_pred cccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--CCCCCCCC
Confidence 3489999999998 6799999999 99999999999999999999875 3 47999999999986 47999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCccCCCccchh-h--------------ccccccccceEEcCCchHHHHHHHHHc-CCeE
Q 018968 204 MEKAFEYIIQNQGIATEDEYPYQAVQGTCSAA-Q--------------KAAAAKISNYEEVPSGDEQALLKAVSM-QPVS 267 (348)
Q Consensus 204 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~-~--------------~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~ 267 (348)
+..|++|+.++ |+++|++|||.+.++.|... . ....+++.+|..++ ++++||++|.+ |||+
T Consensus 111 ~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV~ 187 (277)
T 1deu_A 111 DLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPIS 187 (277)
T ss_dssp HHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCEE
Confidence 99999999887 99999999999988888741 1 11346778888886 47889999866 9999
Q ss_pred EEEEeccccccccCCceEecC-CCCCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEEeCCC--------ccc
Q 018968 268 IGIAAYTTEFKSYKEGIFNGV-CGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKILRDEG--------LCG 338 (348)
Q Consensus 268 v~~~~~~~~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~--------~Cg 338 (348)
++++++ ++|+.|++|||+.+ +...++|||+|||||++ +|++|||||||||++|||+|||||+|+.| .||
T Consensus 188 v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cg 265 (277)
T 1deu_A 188 CGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLA 265 (277)
T ss_dssp EEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTT
T ss_pred EEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEeccc-CCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccce
Confidence 999998 79999999999886 44568999999999998 89999999999999999999999999988 999
Q ss_pred ccCccceec
Q 018968 339 IGTQSSYPL 347 (348)
Q Consensus 339 i~~~~~yp~ 347 (348)
|+++++|++
T Consensus 266 Ie~~~~~~~ 274 (277)
T 1deu_A 266 IEEHCTFGD 274 (277)
T ss_dssp TTSCEEEEE
T ss_pred eccccEeec
Confidence 999999875
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=7.8e-54 Score=393.20 Aligned_cols=208 Identities=25% Similarity=0.519 Sum_probs=167.2
Q ss_pred CeeecCCC-CCCC--ccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC-CCCCCCCCcH-HHHHHHHH
Q 018968 138 TSLDWRDK-KAVT--PIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN-GNNGCGGGTM-EKAFEYII 212 (348)
Q Consensus 138 ~~~Dwr~~-g~v~--pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-~~~gc~GG~~-~~a~~~~~ 212 (348)
...|||+. |+++ ||||||.||||||||++++||++++++++..+.||+|+|+||+.. ++.||+||.. ..++.|+.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 56799999 6877 999999999999999999999999999999999999999999864 4789999964 45567787
Q ss_pred HcCCCCCCCCCCCccC--CCccchhhc-----------------cccccccceEEcCCc----h----HHHHHHHHHc-C
Q 018968 213 QNQGIATEDEYPYQAV--QGTCSAAQK-----------------AAAAKISNYEEVPSG----D----EQALLKAVSM-Q 264 (348)
Q Consensus 213 ~~~Gi~~e~~yPY~~~--~~~c~~~~~-----------------~~~~~i~~y~~~~~~----~----~~~i~~al~~-G 264 (348)
+++|+++|++|||... .+.|+.... +...++.+|..++.. + +++||++|++ |
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 7845999999999864 467865321 224577888877642 2 4789999976 9
Q ss_pred CeEEEEEeccccccccC-CceE-ecCCCC-CCCcEEEEEEEeec--CCC--ccEEEEEcCCCCCCCCCceEEEEeC-CCc
Q 018968 265 PVSIGIAAYTTEFKSYK-EGIF-NGVCGT-QLDHAVTIVGFGTT--EDG--ANYWLIKNSWGDTWGDAGYMKILRD-EGL 336 (348)
Q Consensus 265 PV~v~~~~~~~~f~~y~-~Giy-~~~~~~-~~~Hav~iVGyg~~--~~g--~~ywivkNSWG~~WG~~Gy~~i~~~-~~~ 336 (348)
||++++++. +|+.|+ +|++ ...|+. .++|||+|||||++ ++| ++|||||||||++|||+|||||+|+ .|+
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~n~ 246 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTH 246 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCCTT
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCCCc
Confidence 999999975 577774 4433 345764 68999999999985 355 6899999999999999999999974 799
Q ss_pred ccccC---ccceec
Q 018968 337 CGIGT---QSSYPL 347 (348)
Q Consensus 337 Cgi~~---~~~yp~ 347 (348)
|||++ .++||+
T Consensus 247 Cgi~~~~~~~~~~~ 260 (265)
T 2wbf_X 247 CHFNFIHSVVIFNV 260 (265)
T ss_dssp CSSCSCCEEEEECE
T ss_pred cCcceeEEEEeccc
Confidence 99555 555553
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=7.3e-52 Score=384.53 Aligned_cols=231 Identities=20% Similarity=0.304 Sum_probs=177.6
Q ss_pred eEEEcccCCCCCHHHHHHhhhccCCCCCCCCCCCCccccccCCCCCCCCCeeecCCCCCCCccCCCCCCcchHHHHHHHH
Q 018968 89 YKLGTNRFSDLTNDEFRALYTGYKMPSPSHRSTTSSTFKYQNLSMTDVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAA 168 (348)
Q Consensus 89 ~~~g~N~faDlt~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~ 168 (348)
..-..|++.++..|.++. .+|..++.+..+... +........+||++||||+++ ||||||.||||||||++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~-~lG~~p~~~d~rd~~---~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~a 86 (291)
T 3ois_A 14 LVPRGSHMQTVLKRRKKS-GYGYIPDIADIRDFS---YTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAA 86 (291)
T ss_dssp ---------CCCCCCCCT-TCCEECCCCCTTCCB---CCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHH
T ss_pred cccchhhHhHhhhccccc-cCCCCCCCCcccccc---cCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHHH
Confidence 344678999999888765 457776655433211 111001113799999999984 9999999999999999999
Q ss_pred HHHHHHHhCCCCcCCCHHHHh--hhcCC--CC-CCCCCCcHHHHHHHHHHcCCCCCCCCCCCccCC---Cccchh-----
Q 018968 169 VEGITKISGANLIQLSEQQLV--DCSTN--GN-NGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQ---GTCSAA----- 235 (348)
Q Consensus 169 le~~~~~~~~~~~~lS~q~l~--dc~~~--~~-~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~c~~~----- 235 (348)
+|+++++ ++..+.||+|+|+ +|... ++ .+|.||++..|++|+.++ ||++|++|||.+.+ +.|...
T Consensus 87 lE~~~~~-~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~~ 164 (291)
T 3ois_A 87 IQFERIH-DKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAPA 164 (291)
T ss_dssp HHHHHHH-TTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCGG
T ss_pred HHHHHHH-hCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCccccccccccccccc
Confidence 9998764 5677899999998 67632 23 468899999999999988 99999999999863 344320
Q ss_pred ---------hccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCC--ceEecC-CCC--CCCcEEEEE
Q 018968 236 ---------QKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKE--GIFNGV-CGT--QLDHAVTIV 300 (348)
Q Consensus 236 ---------~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~--Giy~~~-~~~--~~~Hav~iV 300 (348)
.....+++.+|..++. ++++|+++|++ |||+++++++ ++|+.|++ |||..+ |.. .++|||+||
T Consensus 165 ~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iV 242 (291)
T 3ois_A 165 SKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLCV 242 (291)
T ss_dssp GSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEEE
T ss_pred cCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEEE
Confidence 1234678999999985 89999999987 8999999998 79999998 999876 432 258999999
Q ss_pred EEeecCCCccEEEEEcCCCCCCCCCceEEEEeC
Q 018968 301 GFGTTEDGANYWLIKNSWGDTWGDAGYMKILRD 333 (348)
Q Consensus 301 Gyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 333 (348)
||| ++++|||||||||++||++|||||+|+
T Consensus 243 Gy~---~~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 243 GYD---DEIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp EEE---TTTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred EEe---CCCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 997 357899999999999999999999998
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.1e-41 Score=328.39 Aligned_cols=196 Identities=18% Similarity=0.336 Sum_probs=154.7
Q ss_pred CCCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHh-CCCCcCCCH----------------HHHhhhcCC---
Q 018968 135 DVPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKIS-GANLIQLSE----------------QQLVDCSTN--- 194 (348)
Q Consensus 135 ~lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~~--- 194 (348)
..|..|+++....++||+|||.||+|||||+++++|+.++++ +++.++||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 346778888878899999999999999999999999999998 578899999 999999743
Q ss_pred ----------CCCCCCCCcHHHHHHHHHHcCCCCCCCCCCCccCC---------------------------C------c
Q 018968 195 ----------GNNGCGGGTMEKAFEYIIQNQGIATEDEYPYQAVQ---------------------------G------T 231 (348)
Q Consensus 195 ----------~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 231 (348)
++.+|+||.+..++.++.+. |++++++|||+... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 36899999999999999876 99999999998631 1 1
Q ss_pred ----------------c----------ch-------------hh-----ccccc--cccceEEc----------------
Q 018968 232 ----------------C----------SA-------------AQ-----KAAAA--KISNYEEV---------------- 249 (348)
Q Consensus 232 ----------------c----------~~-------------~~-----~~~~~--~i~~y~~~---------------- 249 (348)
| .. .+ ..... .+.+|..+
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 11 00 01112 45566543
Q ss_pred -----------------CCchH-HHHHHHHHc-CCeEEEEEeccccccccCCceEecCC---------------------
Q 018968 250 -----------------PSGDE-QALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVC--------------------- 289 (348)
Q Consensus 250 -----------------~~~~~-~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~--------------------- 289 (348)
|..+. +.++.+|.. |||++++++.. +.++++|||+.+|
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 22121 345577877 79999999983 4455999998753
Q ss_pred --CCCCCcEEEEEEEe--ecCCCc-cEEEEEcCCCCCCCCCceEEEEeC
Q 018968 290 --GTQLDHAVTIVGFG--TTEDGA-NYWLIKNSWGDTWGDAGYMKILRD 333 (348)
Q Consensus 290 --~~~~~Hav~iVGyg--~~~~g~-~ywivkNSWG~~WG~~Gy~~i~~~ 333 (348)
.+..+|||+||||| .+.+|+ +|||||||||++||++|||+|+++
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 23579999999999 654687 999999999999999999999986
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=6.6e-41 Score=323.22 Aligned_cols=195 Identities=19% Similarity=0.293 Sum_probs=139.9
Q ss_pred CCCeeecCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHh-CCCCcCCCH----------------HHHhhhcCC----
Q 018968 136 VPTSLDWRDKKAVTPIKDQQECGCCWAFSAVAAVEGITKIS-GANLIQLSE----------------QQLVDCSTN---- 194 (348)
Q Consensus 136 lP~~~Dwr~~g~v~pV~dQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~~---- 194 (348)
.|..|+++..+.++||||||.||+|||||+++++|+.++++ +++.++||+ |+|+||+..
T Consensus 53 ~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~~ 132 (457)
T 2e01_A 53 DNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDS 132 (457)
T ss_dssp CCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTS
T ss_pred CCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCcccc
Confidence 46678888878899999999999999999999999999998 788999999 778999752
Q ss_pred -------CCCCCCCCcHHHHHHHHHHcCCCCCCCCCCC-ccC---------------------------------C----
Q 018968 195 -------GNNGCGGGTMEKAFEYIIQNQGIATEDEYPY-QAV---------------------------------Q---- 229 (348)
Q Consensus 195 -------~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~---- 229 (348)
.+.+|+||.+..++.++.++ |++++++||| +.. .
T Consensus 133 r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~~ 211 (457)
T 2e01_A 133 RLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVT 211 (457)
T ss_dssp HHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHH
T ss_pred hhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHHH
Confidence 27899999999999999887 9999999999 310 0
Q ss_pred -----------------Cccch----h---------------h-cc-------ccccccc--------------------
Q 018968 230 -----------------GTCSA----A---------------Q-KA-------AAAKISN-------------------- 245 (348)
Q Consensus 230 -----------------~~c~~----~---------------~-~~-------~~~~i~~-------------------- 245 (348)
|.|+. . . ++ ....+.+
T Consensus 212 ~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve~ 291 (457)
T 2e01_A 212 LREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKIDR 291 (457)
T ss_dssp HHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEec
Confidence 00111 0 0 00 0001111
Q ss_pred -----------eEEcCCch-HHHHHHHHHc-CCeEEEEEeccccccccCCceEecCC---------------------CC
Q 018968 246 -----------YEEVPSGD-EQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVC---------------------GT 291 (348)
Q Consensus 246 -----------y~~~~~~~-~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~---------------------~~ 291 (348)
|..+|... .+.++.+|.. |||++++++. .|.+|++|||+..| .+
T Consensus 292 ~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s 369 (457)
T 2e01_A 292 LGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHES 369 (457)
T ss_dssp CCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSC
T ss_pred cCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCCC
Confidence 33333211 1445667777 7999999997 47788999998764 24
Q ss_pred CCCcEEEEEEEeecCCCc--cEEEEEcCCCCCCCCCceEEEEeC
Q 018968 292 QLDHAVTIVGFGTTEDGA--NYWLIKNSWGDTWGDAGYMKILRD 333 (348)
Q Consensus 292 ~~~Hav~iVGyg~~~~g~--~ywivkNSWG~~WG~~Gy~~i~~~ 333 (348)
..+|||+|||||.+.+|+ +|||||||||++||++||++|+++
T Consensus 370 ~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~ 413 (457)
T 2e01_A 370 LMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK 413 (457)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH
T ss_pred CCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh
Confidence 579999999999876788 899999999999999999999986
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=8.5e-36 Score=281.74 Aligned_cols=183 Identities=22% Similarity=0.344 Sum_probs=136.8
Q ss_pred CCccCCCCCCcchHHHHHHHHHHHHHHHhCCCCcCCCHHHHhhhcCC-----------CCCCCCCCcHHHHHHHHHHcCC
Q 018968 148 VTPIKDQQECGCCWAFSAVAAVEGITKISGANLIQLSEQQLVDCSTN-----------GNNGCGGGTMEKAFEYIIQNQG 216 (348)
Q Consensus 148 v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~dc~~~-----------~~~gc~GG~~~~a~~~~~~~~G 216 (348)
++||||||.||+|||||+++++|+.+++++++.++||+|+|++|+.. .+.+|+||.+..|+.|+.++ |
T Consensus 22 vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~-G 100 (383)
T 3pw3_A 22 ITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF-G 100 (383)
T ss_dssp CCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-C
T ss_pred CCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-C
Confidence 89999999999999999999999999999999999999999999741 25799999999999999987 9
Q ss_pred CCCCCCCC------CccCC-----------------C-ccc--------hh-----------------------------
Q 018968 217 IATEDEYP------YQAVQ-----------------G-TCS--------AA----------------------------- 235 (348)
Q Consensus 217 i~~e~~yP------Y~~~~-----------------~-~c~--------~~----------------------------- 235 (348)
++++++|| +.... . .-. ..
T Consensus 101 ivpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~TP 180 (383)
T 3pw3_A 101 LVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTP 180 (383)
T ss_dssp CCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEECH
T ss_pred cCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcCH
Confidence 99999999 22100 0 000 00
Q ss_pred ---hccccccccceEEcCC---------------c----------hHHHHHHH----HHcC-CeEEEEEeccccccccCC
Q 018968 236 ---QKAAAAKISNYEEVPS---------------G----------DEQALLKA----VSMQ-PVSIGIAAYTTEFKSYKE 282 (348)
Q Consensus 236 ---~~~~~~~i~~y~~~~~---------------~----------~~~~i~~a----l~~G-PV~v~~~~~~~~f~~y~~ 282 (348)
.........+|..|.. . ..+.|+++ |..| ||..+.++....|. +.
T Consensus 181 ~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~--~~ 258 (383)
T 3pw3_A 181 KSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT--RD 258 (383)
T ss_dssp HHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC--TT
T ss_pred HHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC--CC
Confidence 0000112233333210 0 14445444 5667 99999999844555 78
Q ss_pred ceEecCC-----------------------------------------------CCCCCcEEEEEEEeecCCCccEEEEE
Q 018968 283 GIFNGVC-----------------------------------------------GTQLDHAVTIVGFGTTEDGANYWLIK 315 (348)
Q Consensus 283 Giy~~~~-----------------------------------------------~~~~~Hav~iVGyg~~~~g~~ywivk 315 (348)
||...+. .+..+|||+|||||.+.+|++||+||
T Consensus 259 Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw~vk 338 (383)
T 3pw3_A 259 GVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVK 338 (383)
T ss_dssp SEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEEEEE
T ss_pred ceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEEEEE
Confidence 8873210 12347999999999866889999999
Q ss_pred cCCCCCCCCCceEEEEeC
Q 018968 316 NSWGDTWGDAGYMKILRD 333 (348)
Q Consensus 316 NSWG~~WG~~Gy~~i~~~ 333 (348)
||||++||++||++|+++
T Consensus 339 NSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 339 NSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp CSBCSCSTTTTEEEEEHH
T ss_pred eCCCCCCCcCCeEEecHH
Confidence 999999999999999976
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.80 E-value=2.4e-19 Score=139.55 Aligned_cols=75 Identities=39% Similarity=0.649 Sum_probs=69.2
Q ss_pred chhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEcccCCCCCHHHHHHhhhccCCC
Q 018968 39 HEQSVVEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKEGNRTYKLGTNRFSDLTNDEFRALYTGYKMP 114 (348)
Q Consensus 39 ~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~faDlt~~E~~~~~~~~~~~ 114 (348)
++..+...|++|+++|+|.|.+.+|+..|+.||++|++.|++||++ +.+|++|+|+|+|||.+||+++++|.+++
T Consensus 17 ~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 17 KEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred CcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 4677889999999999999999899999999999999999999998 58999999999999999999999887654
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.74 E-value=2e-18 Score=128.38 Aligned_cols=68 Identities=32% Similarity=0.539 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHHhC---CCCceEEEcccCCCCCHHHHHHhhhccCC
Q 018968 44 VEMHEKWMAQHGRSYKDELEKEMRFKIFKENLEYIEKANKE---GNRTYKLGTNRFSDLTNDEFRALYTGYKM 113 (348)
Q Consensus 44 ~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~faDlt~~E~~~~~~~~~~ 113 (348)
+..|++|+.+|+|.|.+.+|+..| .||++|++.|++||++ +..+|++|+|+|+|||.+|| +.++|.++
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 357999999999999888899999 9999999999999985 35789999999999999999 88887654
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.51 E-value=0.0021 Score=53.29 Aligned_cols=131 Identities=18% Similarity=0.198 Sum_probs=88.1
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhC--------CCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcCCCCCCCCC
Q 018968 152 KDQQECGCCWAFSAVAAVEGITKISG--------ANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEY 223 (348)
Q Consensus 152 ~dQg~cGsCwAfA~~~~le~~~~~~~--------~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y 223 (348)
..||.-+-|-+|+.++.|-+...... .-...+|+++|.++ |..+.+.++|.+.. |-.+.
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t---------~~~~~q~Iky~~s~-G~~~~--- 91 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQ-GRDIH--- 91 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC---------CBCHHHHHHHHHHT-TCCCE---
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHc-CcChh---
Confidence 45999999999999998876543221 11256777777763 45688999998755 43210
Q ss_pred CCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecCCCCCCCcEEEEEEE
Q 018968 224 PYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGF 302 (348)
Q Consensus 224 PY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGy 302 (348)
-....+ +.+++++.+.+ -|+.+...-. +....+...+||++||||
T Consensus 92 ---------------------~~nr~l--s~neV~~~i~~Nk~I~v~~~~v-----------~e~~~~~~~gHA~av~Gy 137 (183)
T 1pxv_A 92 ---------------------YQEGVP--SYNQVDQLTKDNVGIMILAQSV-----------SQNPNDPHLGHALAVVGN 137 (183)
T ss_dssp ---------------------EEESCC--CHHHHHHHHHTTCCEEEEEECC-----------CSSTTSCCCEEEEEEEEE
T ss_pred ---------------------HhcCCC--CHHHHHHHHhcCCcEEEEcccc-----------ccCCCCccCceeEEEEee
Confidence 011122 46788999977 5888765432 112233467899999999
Q ss_pred eecCCCccEEEEEcCCCCCCCCCceEEEEeCCC
Q 018968 303 GTTEDGANYWLIKNSWGDTWGDAGYMKILRDEG 335 (348)
Q Consensus 303 g~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~ 335 (348)
-.- ++.++.+|=|-|-. |++-++.+.+
T Consensus 138 a~~-~~~~~y~~WNPW~~-----~~~~~~a~S~ 164 (183)
T 1pxv_A 138 AKI-NDQEKLIYWNPWDT-----ELSIQDADSS 164 (183)
T ss_dssp EEE-TTEEEEEEECTTCS-----SCEEEETTCC
T ss_pred eec-CCCeEEEEeCCccC-----CcEeecCCCC
Confidence 987 58899999888854 7777765533
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.47 E-value=0.0031 Score=52.10 Aligned_cols=121 Identities=16% Similarity=0.179 Sum_probs=81.6
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhC--------CCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcCCCCCCCCC
Q 018968 152 KDQQECGCCWAFSAVAAVEGITKISG--------ANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEY 223 (348)
Q Consensus 152 ~dQg~cGsCwAfA~~~~le~~~~~~~--------~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y 223 (348)
..||.-+-|-+||.++.|-+...... .-...+|+++|..+. ..+.+.++|+++. |--.
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~---------~t~~e~iky~~s~-g~~~---- 81 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG---------LTPREMIYFGQTQ-GRSP---- 81 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC---------CCHHHHHHHHHHT-TCCC----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC---------CCHHHHHHHHHHc-CCCh----
Confidence 45999999999999999876553221 113578999998543 4578889998776 3210
Q ss_pred CCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecCCCCCCCcEEEEEEE
Q 018968 224 PYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGF 302 (348)
Q Consensus 224 PY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGy 302 (348)
.-....+ +.+++++.+.+ -|+.+..+-. + .+.+...+||++||||
T Consensus 82 --------------------~~~n~~l--s~~eV~~~~~~nk~i~i~~~~v-e-----------~~~~~~~gHAlav~Gy 127 (174)
T 1cv8_A 82 --------------------QLLNRMT--TYNEVDNLTKNNKGIAILGSRV-E-----------SRNGMHAGHAMAVVGN 127 (174)
T ss_dssp --------------------EEESSCC--CHHHHHHHHHTTCCEEEEEEES-S-----------CBTTBCCEEEEEEEEE
T ss_pred --------------------hhhcCCC--CHHHHHHHHhcCCceEEEcccc-c-----------CCCCCCCceeEEEEee
Confidence 0001111 45778888877 4887765432 1 1122467899999999
Q ss_pred eecCCCccEEEEEcCCCC
Q 018968 303 GTTEDGANYWLIKNSWGD 320 (348)
Q Consensus 303 g~~~~g~~ywivkNSWG~ 320 (348)
-.-.+|.+|.++=|-|-.
T Consensus 128 ~~~~ng~~~y~~WNPW~~ 145 (174)
T 1cv8_A 128 AKLNNGQEVIIIWNPWDN 145 (174)
T ss_dssp EEETTSCEEEEEECTTCS
T ss_pred eeecCCceEEEEeCCccC
Confidence 986588899999888853
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.35 E-value=0.003 Score=57.78 Aligned_cols=129 Identities=20% Similarity=0.248 Sum_probs=84.9
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhC--------CCCcCCCHHHHhhhcCCCCCCCCCCcHHHHHHHHHHcCCCCCCCCC
Q 018968 152 KDQQECGCCWAFSAVAAVEGITKISG--------ANLIQLSEQQLVDCSTNGNNGCGGGTMEKAFEYIIQNQGIATEDEY 223 (348)
Q Consensus 152 ~dQg~cGsCwAfA~~~~le~~~~~~~--------~~~~~lS~q~l~dc~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y 223 (348)
..||.-+.|-+||.+++|-+...... .-...+|+++|.++ |..+.+.++|++.. |.-
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t---------s~~~~q~Iky~qsy-G~~----- 265 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKSQ-GRD----- 265 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC---------CCCHHHHHHHHHHT-TEE-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHHh-Ccc-----
Confidence 46999999999999998876432111 11245777777663 45688899998754 421
Q ss_pred CCccCCCccchhhccccccccceEEcCCchHHHHHHHHHc-CCeEEEEEeccccccccCCceEecCCCCCCCcEEEEEEE
Q 018968 224 PYQAVQGTCSAAQKAAAAKISNYEEVPSGDEQALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGF 302 (348)
Q Consensus 224 PY~~~~~~c~~~~~~~~~~i~~y~~~~~~~~~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGy 302 (348)
+.-....+ +.+.+++.+.. -|+.+......+. ..+...+|||+||||
T Consensus 266 -------------------~~~~n~~l--s~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavvGy 313 (367)
T 1x9y_A 266 -------------------IHYQEGVP--SYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVVGN 313 (367)
T ss_dssp -------------------EEEEESCC--CHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEEEE
T ss_pred -------------------hhhhcCCC--CHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEEec
Confidence 11111222 45777888876 6998877654111 123467899999999
Q ss_pred eecCCCccEEEEEcCCCCCCCCCceEEEEeC
Q 018968 303 GTTEDGANYWLIKNSWGDTWGDAGYMKILRD 333 (348)
Q Consensus 303 g~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~ 333 (348)
-.. ++.+|.++=|-|-. +++-++..
T Consensus 314 A~~-~~~~~y~~WNPW~~-----~~~~~sa~ 338 (367)
T 1x9y_A 314 AKI-NDQEKLIYWNPWDT-----ELSIQDAD 338 (367)
T ss_dssp EEE-TTEEEEEEECTTCS-----SCEEEETT
T ss_pred ccc-CCCcEEEEecCccC-----CceeecCC
Confidence 776 58899999787743 36666544
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=89.20 E-value=1.1 Score=39.32 Aligned_cols=55 Identities=25% Similarity=0.398 Sum_probs=33.9
Q ss_pred EEcCCchHHHHHHHHHcC-CeEEEEEeccccccccCCc---eEecCCC----CCCCcEEEEEEEee
Q 018968 247 EEVPSGDEQALLKAVSMQ-PVSIGIAAYTTEFKSYKEG---IFNGVCG----TQLDHAVTIVGFGT 304 (348)
Q Consensus 247 ~~~~~~~~~~i~~al~~G-PV~v~~~~~~~~f~~y~~G---iy~~~~~----~~~~Hav~iVGyg~ 304 (348)
..+...+.++|++.|.+| ||.|-.... |.....+ .+..+.+ ...+|+|+|+||+.
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~~---~~p~~~~~~~~W~~~~G~~~~~~~~H~VVl~GYd~ 187 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNAT---FAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYDQ 187 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEETT---SSCCCGGGCEEEEETTEEEEECTTEEEEEEEEECS
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeCC---cccccccccceeecCCCceeeccCCeEEEEEEEeC
Confidence 445556899999999997 999866432 3221100 1111111 23579999999964
No 50
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=54.41 E-value=26 Score=31.91 Aligned_cols=58 Identities=22% Similarity=0.398 Sum_probs=35.7
Q ss_pred HHHHHHHHc-CCeEEEEEeccccccccCCceEecCCCCCCCcEEEEEEEeecCCCccEEEEEcCCCCCCCCCceEEEE
Q 018968 255 QALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWGDAGYMKIL 331 (348)
Q Consensus 255 ~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~ 331 (348)
+.|++.|.+ .||.+.-.-. .. . +...+||.+|=||.. .+||=+==.||-. .+|||.+.
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~--~~------~-----~~~~GHafV~DGY~~----~~~~H~NwGWgG~--~nGyy~l~ 297 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP--GS------M-----GQDAGHAFVIDGYNK----AGLVSVNWGWNGD--VDGYYKID 297 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECT----TSCEEEECSSTTT--TCEEECCT
T ss_pred HHHHHHHHhCCCEEEEEecC--CC------C-----CCCCceEEEEccccC----CCeEEEecCCCCC--CCceEecc
Confidence 467888877 5987643221 11 0 135789999999964 3677774344411 38999885
No 51
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=53.24 E-value=33 Score=31.87 Aligned_cols=52 Identities=29% Similarity=0.553 Sum_probs=35.8
Q ss_pred HHHHHHHHc-CCeEEEEEeccccccccCCceEecCCCCCCCcEEEEEEEeecCCCccEEEEEcCCCCCCC--CCceEEEE
Q 018968 255 QALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWG--DAGYMKIL 331 (348)
Q Consensus 255 ~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG--~~Gy~~i~ 331 (348)
+.|++.|.+ .||.+.-.-. ..+||.+|=||.. .+||=+= || || .+|||.+.
T Consensus 290 ~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~----~~~~H~N--wG--WgG~~nGyy~l~ 343 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADG----RNFYHVN--WG--WGGVSDGFFRLD 343 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECS----SSEEEEE--CS--STTTTCEEEESC
T ss_pred HHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccC----CCeEEEE--eC--cCCCCCcceecc
Confidence 567788887 5997643211 2689999999964 4677773 55 44 58999985
Q ss_pred e
Q 018968 332 R 332 (348)
Q Consensus 332 ~ 332 (348)
.
T Consensus 344 ~ 344 (371)
T 1dki_A 344 A 344 (371)
T ss_dssp C
T ss_pred C
Confidence 3
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=52.34 E-value=25 Score=31.01 Aligned_cols=52 Identities=29% Similarity=0.570 Sum_probs=36.6
Q ss_pred HHHHHHHHc-CCeEEEEEeccccccccCCceEecCCCCCCCcEEEEEEEeecCCCccEEEEEcCCCCCCC--CCceEEEE
Q 018968 255 QALLKAVSM-QPVSIGIAAYTTEFKSYKEGIFNGVCGTQLDHAVTIVGFGTTEDGANYWLIKNSWGDTWG--DAGYMKIL 331 (348)
Q Consensus 255 ~~i~~al~~-GPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG--~~Gy~~i~ 331 (348)
+.|++.|.+ .||.++-.. ...+||.+|=||..+ +|+-|= || || .+|||.+.
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~----~~~H~N--wG--WgG~~nGYy~l~ 225 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR----NFYHVN--WG--WGGVSDGFFRLD 225 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS----SCEEEE--CS--STTTTCEEECTT
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC----CEEEEE--cC--CCCCCCceeecc
Confidence 667888888 499875421 246899999999643 566663 55 54 58999885
Q ss_pred e
Q 018968 332 R 332 (348)
Q Consensus 332 ~ 332 (348)
.
T Consensus 226 ~ 226 (261)
T 4d8b_A 226 A 226 (261)
T ss_dssp C
T ss_pred c
Confidence 3
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=31.52 E-value=46 Score=30.37 Aligned_cols=38 Identities=21% Similarity=0.464 Sum_probs=0.0
Q ss_pred CcEEEEEEEeec---CCCccEEEEEcCCC-CCCC-------------------------CCceEEEE
Q 018968 294 DHAVTIVGFGTT---EDGANYWLIKNSWG-DTWG-------------------------DAGYMKIL 331 (348)
Q Consensus 294 ~Hav~iVGyg~~---~~g~~ywivkNSWG-~~WG-------------------------~~Gy~~i~ 331 (348)
+||-.|++.... ..+...-.+||-|| ..|- ++|-|||+
T Consensus 246 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 312 (339)
T 2r9f_A 246 GHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMS 312 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEE
No 54
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=26.02 E-value=65 Score=29.14 Aligned_cols=38 Identities=21% Similarity=0.526 Sum_probs=0.0
Q ss_pred CcEEEEEEEeec---CCCccEEEEEcCCC-CCCC-------------------------CCceEEEE
Q 018968 294 DHAVTIVGFGTT---EDGANYWLIKNSWG-DTWG-------------------------DAGYMKIL 331 (348)
Q Consensus 294 ~Hav~iVGyg~~---~~g~~ywivkNSWG-~~WG-------------------------~~Gy~~i~ 331 (348)
+||-.|++.... ..+...-.+||-|| ..|- ++|-|||+
T Consensus 241 ~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 307 (326)
T 2nqa_A 241 SHAYSVTGVEEVNFQGHPEKLIRLRNPWGEVEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMS 307 (326)
T ss_dssp SCCEEEEEEEEEEETTEEEEEEEEECTTCC-CCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CceEEEEEEEEEecCCCceEEEEecCCCcCccccCCCCCCCccccccCHHHHHHhCCCCCCCEEEEE
No 55
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=24.29 E-value=76 Score=28.89 Aligned_cols=38 Identities=26% Similarity=0.626 Sum_probs=0.0
Q ss_pred CcEEEEEEEeec---CCCccEEEEEcCCCC-----CCC----------------------CCceEEEE
Q 018968 294 DHAVTIVGFGTT---EDGANYWLIKNSWGD-----TWG----------------------DAGYMKIL 331 (348)
Q Consensus 294 ~Hav~iVGyg~~---~~g~~ywivkNSWG~-----~WG----------------------~~Gy~~i~ 331 (348)
+||-.|++.... ..+.....+||-||. .|. ++|-|||+
T Consensus 245 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~FWMs 312 (339)
T 1ziv_A 245 GHAYSVTGIDQVSFRGQRIELIRIRNPWGQVEWNGSWSDSSPEWRSVGPAEQKRLCHTALDDGEFWMA 312 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECCSSCCCCCSTTSTTCHHHHHSCHHHHHHTTCCCCSSSEEEEE
T ss_pred CeeEEEeEEEEEecCCCceEEEEecCCCCCCccCCCCCcCChhccccCHHHHHHhhCCCCCCCEEEEE
No 56
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=21.09 E-value=41 Score=23.45 Aligned_cols=27 Identities=7% Similarity=0.015 Sum_probs=20.0
Q ss_pred CCccCCCCCCcchHHHHHHHHHHHHHHHh
Q 018968 148 VTPIKDQQECGCCWAFSAVAAVEGITKIS 176 (348)
Q Consensus 148 v~pV~dQg~cGsCwAfA~~~~le~~~~~~ 176 (348)
+--|+=||.|++| ......+|..++..
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~~ 63 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLREK 63 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHHH
Confidence 5578899999999 34456788777643
Done!