Query 018970
Match_columns 348
No_of_seqs 267 out of 2707
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 08:52:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xtp_A LMAJ004091AAA; SGPP, st 100.0 4.6E-31 1.6E-35 238.9 19.4 242 66-325 12-254 (254)
2 2ex4_A Adrenal gland protein A 100.0 6.3E-28 2.1E-32 217.3 16.9 216 101-325 26-241 (241)
3 3h2b_A SAM-dependent methyltra 99.9 2E-21 6.9E-26 169.7 18.3 142 158-311 42-184 (203)
4 4gek_A TRNA (CMO5U34)-methyltr 99.9 2.3E-21 7.9E-26 177.0 16.1 148 155-309 68-245 (261)
5 3e23_A Uncharacterized protein 99.9 4.3E-21 1.5E-25 168.8 15.6 158 155-326 41-200 (211)
6 3hnr_A Probable methyltransfer 99.9 3.8E-21 1.3E-25 170.0 15.1 158 156-334 44-217 (220)
7 3dtn_A Putative methyltransfer 99.9 1.2E-20 4E-25 168.5 16.4 146 155-309 42-214 (234)
8 1pjz_A Thiopurine S-methyltran 99.8 1E-20 3.4E-25 166.2 14.6 151 155-310 20-177 (203)
9 3bus_A REBM, methyltransferase 99.8 2E-20 6.8E-25 170.9 16.2 148 155-309 59-216 (273)
10 3l8d_A Methyltransferase; stru 99.8 2.1E-20 7E-25 167.5 15.3 141 156-308 52-199 (242)
11 1kpg_A CFA synthase;, cyclopro 99.8 6.5E-20 2.2E-24 168.9 19.1 146 155-308 62-227 (287)
12 3g5l_A Putative S-adenosylmeth 99.8 2.1E-20 7.1E-25 169.0 15.4 146 155-311 42-218 (253)
13 3jwh_A HEN1; methyltransferase 99.8 9.4E-20 3.2E-24 161.0 16.2 167 156-323 28-206 (217)
14 2o57_A Putative sarcosine dime 99.8 4.5E-20 1.5E-24 170.8 14.8 147 155-308 80-233 (297)
15 2p7i_A Hypothetical protein; p 99.8 4.2E-20 1.4E-24 165.5 14.1 139 156-308 41-198 (250)
16 3ujc_A Phosphoethanolamine N-m 99.8 7.6E-20 2.6E-24 165.8 14.8 147 155-309 53-206 (266)
17 3hem_A Cyclopropane-fatty-acyl 99.8 1.8E-19 6.1E-24 167.4 16.5 147 155-309 70-243 (302)
18 2gb4_A Thiopurine S-methyltran 99.8 3.3E-19 1.1E-23 161.9 17.5 165 156-325 67-250 (252)
19 1vl5_A Unknown conserved prote 99.8 1.1E-19 3.6E-24 165.1 14.2 145 155-308 35-189 (260)
20 3lcc_A Putative methyl chlorid 99.8 2.2E-19 7.4E-24 160.6 16.0 143 158-311 67-209 (235)
21 2fk8_A Methoxy mycolic acid sy 99.8 2.1E-19 7.3E-24 168.0 16.6 146 155-308 88-253 (318)
22 3jwg_A HEN1, methyltransferase 99.8 5.2E-19 1.8E-23 156.3 18.2 157 156-313 28-196 (219)
23 3dli_A Methyltransferase; PSI- 99.8 6.6E-20 2.3E-24 164.6 12.4 144 155-313 39-188 (240)
24 1nkv_A Hypothetical protein YJ 99.8 1.6E-19 5.4E-24 163.2 14.6 145 155-307 34-185 (256)
25 4htf_A S-adenosylmethionine-de 99.8 1.2E-19 4.3E-24 166.9 13.4 146 157-310 68-233 (285)
26 3ou2_A SAM-dependent methyltra 99.8 2.7E-19 9.2E-24 157.4 14.5 142 155-308 44-204 (218)
27 3bkw_A MLL3908 protein, S-aden 99.8 2.3E-19 8E-24 160.6 14.0 144 156-310 42-215 (243)
28 3dh0_A SAM dependent methyltra 99.8 2.6E-19 9E-24 158.0 14.1 146 155-310 35-182 (219)
29 3dlc_A Putative S-adenosyl-L-m 99.8 3.3E-20 1.1E-24 163.0 8.2 144 159-309 45-203 (219)
30 3f4k_A Putative methyltransfer 99.8 1.7E-19 5.8E-24 163.1 12.7 145 155-308 44-195 (257)
31 1xxl_A YCGJ protein; structura 99.8 2.3E-19 7.8E-24 161.1 13.2 145 155-308 19-173 (239)
32 3pfg_A N-methyltransferase; N, 99.8 7.7E-19 2.6E-23 159.6 16.6 141 156-309 49-237 (263)
33 3mgg_A Methyltransferase; NYSG 99.8 1.7E-19 5.8E-24 165.1 12.2 159 139-308 22-197 (276)
34 3sm3_A SAM-dependent methyltra 99.8 8E-19 2.7E-23 156.0 15.9 153 156-310 29-208 (235)
35 3kkz_A Uncharacterized protein 99.8 1.7E-19 6E-24 164.4 11.8 147 155-309 44-196 (267)
36 2xvm_A Tellurite resistance pr 99.8 1.1E-18 3.8E-23 151.3 16.0 143 156-309 31-173 (199)
37 2a14_A Indolethylamine N-methy 99.8 2.4E-19 8.1E-24 163.6 11.9 170 139-309 38-238 (263)
38 3vc1_A Geranyl diphosphate 2-C 99.8 6E-19 2.1E-23 164.7 14.3 147 155-309 115-269 (312)
39 3cgg_A SAM-dependent methyltra 99.8 2.9E-18 9.8E-23 147.7 15.4 130 156-309 45-175 (195)
40 3g2m_A PCZA361.24; SAM-depende 99.8 4.5E-18 1.5E-22 157.7 17.1 149 157-310 82-275 (299)
41 2i62_A Nicotinamide N-methyltr 99.8 1.9E-18 6.4E-23 156.7 13.8 156 155-310 54-240 (265)
42 3dp7_A SAM-dependent methyltra 99.8 4.8E-18 1.6E-22 162.2 16.8 149 157-312 179-345 (363)
43 1ri5_A MRNA capping enzyme; me 99.8 7.3E-18 2.5E-22 155.4 17.5 150 155-309 62-250 (298)
44 3ocj_A Putative exported prote 99.8 2.4E-18 8.3E-23 160.1 14.0 148 155-308 116-290 (305)
45 2kw5_A SLR1183 protein; struct 99.8 2.1E-18 7.3E-23 150.3 12.8 141 156-309 29-171 (202)
46 2p8j_A S-adenosylmethionine-de 99.8 2.4E-18 8.2E-23 150.5 12.5 148 155-309 21-183 (209)
47 3ggd_A SAM-dependent methyltra 99.8 2.6E-18 8.9E-23 154.4 12.7 143 155-309 54-219 (245)
48 3e8s_A Putative SAM dependent 99.8 1.3E-18 4.5E-23 153.6 10.0 137 156-308 51-208 (227)
49 3m70_A Tellurite resistance pr 99.8 8.4E-18 2.9E-22 154.7 15.5 141 157-309 120-260 (286)
50 3bxo_A N,N-dimethyltransferase 99.8 7E-18 2.4E-22 150.5 14.5 102 156-270 39-142 (239)
51 2yqz_A Hypothetical protein TT 99.8 2.1E-18 7.2E-23 156.2 11.1 142 155-306 37-193 (263)
52 1y8c_A S-adenosylmethionine-de 99.8 1.1E-17 3.8E-22 149.6 15.6 144 157-309 37-225 (246)
53 2g72_A Phenylethanolamine N-me 99.8 4.1E-18 1.4E-22 157.3 13.1 154 157-310 71-257 (289)
54 3i9f_A Putative type 11 methyl 99.8 6.8E-18 2.3E-22 143.0 13.0 135 155-310 15-149 (170)
55 3gu3_A Methyltransferase; alph 99.8 3.9E-18 1.3E-22 157.1 12.4 144 155-308 20-189 (284)
56 4hg2_A Methyltransferase type 99.8 1.2E-18 4.3E-23 158.5 8.9 98 156-269 38-135 (257)
57 2gs9_A Hypothetical protein TT 99.8 7.9E-18 2.7E-22 147.7 13.6 126 157-300 36-171 (211)
58 3ccf_A Cyclopropane-fatty-acyl 99.8 1.1E-17 3.7E-22 153.5 14.9 139 155-308 55-209 (279)
59 3d2l_A SAM-dependent methyltra 99.8 7.2E-18 2.4E-22 150.8 13.2 144 156-309 32-223 (243)
60 2aot_A HMT, histamine N-methyl 99.8 6.4E-18 2.2E-22 156.3 13.3 160 141-307 35-219 (292)
61 4fsd_A Arsenic methyltransfera 99.7 2.2E-18 7.4E-23 165.7 10.2 149 155-308 81-250 (383)
62 2p35_A Trans-aconitate 2-methy 99.7 3E-17 1E-21 148.3 16.9 137 155-305 31-186 (259)
63 3g07_A 7SK snRNA methylphospha 99.7 2.2E-18 7.4E-23 159.7 9.4 153 157-309 46-269 (292)
64 1ve3_A Hypothetical protein PH 99.7 2E-17 6.8E-22 146.4 15.2 107 156-270 37-143 (227)
65 3orh_A Guanidinoacetate N-meth 99.7 3.3E-19 1.1E-23 160.2 3.5 141 156-305 59-206 (236)
66 1vlm_A SAM-dependent methyltra 99.7 1.6E-17 5.6E-22 146.9 14.1 134 158-311 48-190 (219)
67 3ofk_A Nodulation protein S; N 99.7 2.6E-17 8.8E-22 144.9 15.3 135 155-305 49-184 (216)
68 3ege_A Putative methyltransfer 99.7 3.6E-18 1.2E-22 155.4 10.0 138 155-309 32-178 (261)
69 3i53_A O-methyltransferase; CO 99.7 3.1E-17 1.1E-21 154.4 16.6 148 155-310 167-322 (332)
70 3bkx_A SAM-dependent methyltra 99.7 4.4E-17 1.5E-21 148.7 15.5 148 155-309 41-219 (275)
71 1wzn_A SAM-dependent methyltra 99.7 2.3E-17 7.8E-22 148.7 13.2 117 139-268 27-144 (252)
72 1zx0_A Guanidinoacetate N-meth 99.7 3.2E-18 1.1E-22 153.4 7.4 141 156-303 59-204 (236)
73 2r3s_A Uncharacterized protein 99.7 2.1E-17 7.2E-22 155.4 13.3 148 156-310 164-324 (335)
74 2pxx_A Uncharacterized protein 99.7 1.1E-16 3.7E-21 140.2 16.8 107 156-270 41-160 (215)
75 3thr_A Glycine N-methyltransfe 99.7 4.9E-18 1.7E-22 156.6 8.3 111 156-269 56-175 (293)
76 3gwz_A MMCR; methyltransferase 99.7 8.5E-17 2.9E-21 153.8 17.1 146 155-308 200-355 (369)
77 3cc8_A Putative methyltransfer 99.7 5.3E-17 1.8E-21 143.5 14.1 139 156-310 31-186 (230)
78 3mcz_A O-methyltransferase; ad 99.7 4E-17 1.4E-21 154.7 14.1 145 155-306 176-336 (352)
79 1x19_A CRTF-related protein; m 99.7 1.6E-16 5.6E-21 151.1 16.6 147 155-309 188-348 (359)
80 4e2x_A TCAB9; kijanose, tetron 99.7 6.3E-18 2.2E-22 164.0 6.8 145 155-310 105-254 (416)
81 2vdw_A Vaccinia virus capping 99.7 3.3E-17 1.1E-21 152.5 9.5 154 156-309 47-246 (302)
82 1qzz_A RDMB, aclacinomycin-10- 99.7 3.9E-16 1.3E-20 149.1 15.6 148 155-310 180-340 (374)
83 3lst_A CALO1 methyltransferase 99.7 6.5E-16 2.2E-20 146.4 16.5 143 155-308 182-335 (348)
84 2ip2_A Probable phenazine-spec 99.7 2.3E-16 7.8E-21 148.4 13.2 143 159-309 169-322 (334)
85 3iv6_A Putative Zn-dependent a 99.7 1.2E-16 4E-21 145.4 10.3 106 155-269 43-148 (261)
86 4a6d_A Hydroxyindole O-methylt 99.7 9.7E-16 3.3E-20 145.7 16.9 146 155-309 177-334 (353)
87 2qe6_A Uncharacterized protein 99.7 4E-16 1.4E-20 143.2 13.7 139 157-305 77-238 (274)
88 1tw3_A COMT, carminomycin 4-O- 99.7 5.9E-16 2E-20 147.1 15.3 148 155-310 181-340 (360)
89 3reo_A (ISO)eugenol O-methyltr 99.7 8.5E-16 2.9E-20 146.8 16.3 140 155-310 201-356 (368)
90 2zfu_A Nucleomethylin, cerebra 99.7 3.9E-16 1.3E-20 137.3 12.7 113 156-308 66-178 (215)
91 3grz_A L11 mtase, ribosomal pr 99.7 5.6E-16 1.9E-20 135.4 13.4 128 156-310 59-186 (205)
92 3p9c_A Caffeic acid O-methyltr 99.7 5.3E-16 1.8E-20 148.1 14.3 140 155-310 199-354 (364)
93 4df3_A Fibrillarin-like rRNA/T 99.7 1.1E-15 3.7E-20 136.5 15.0 151 149-316 69-224 (233)
94 3e05_A Precorrin-6Y C5,15-meth 99.6 3E-15 1E-19 130.8 15.9 123 155-302 38-161 (204)
95 3g5t_A Trans-aconitate 3-methy 99.6 4.2E-16 1.4E-20 144.4 11.0 105 156-268 35-148 (299)
96 3htx_A HEN1; HEN1, small RNA m 99.6 6E-15 2E-19 150.6 19.9 155 156-311 720-900 (950)
97 3mti_A RRNA methylase; SAM-dep 99.6 1.2E-15 4E-20 131.1 12.4 119 140-270 10-136 (185)
98 1fbn_A MJ fibrillarin homologu 99.6 3E-15 1E-19 133.5 15.3 141 155-314 72-218 (230)
99 3m33_A Uncharacterized protein 99.6 2.7E-16 9.4E-21 139.8 8.3 117 156-307 47-165 (226)
100 3q87_B N6 adenine specific DNA 99.6 2.5E-15 8.7E-20 127.9 13.4 122 156-310 22-150 (170)
101 3hm2_A Precorrin-6Y C5,15-meth 99.6 3.1E-15 1.1E-19 127.2 13.9 128 155-308 23-152 (178)
102 3evz_A Methyltransferase; NYSG 99.6 3.1E-15 1.1E-19 132.9 14.5 137 155-311 53-208 (230)
103 3bgv_A MRNA CAP guanine-N7 met 99.6 1.2E-15 4.2E-20 142.2 12.3 154 156-309 33-232 (313)
104 1xdz_A Methyltransferase GIDB; 99.6 1.6E-15 5.4E-20 136.2 12.0 129 156-308 69-201 (240)
105 3njr_A Precorrin-6Y methylase; 99.6 3.6E-15 1.2E-19 130.7 14.0 127 155-308 53-179 (204)
106 3mq2_A 16S rRNA methyltransfer 99.6 9.8E-16 3.4E-20 135.1 10.3 149 155-308 25-183 (218)
107 3lpm_A Putative methyltransfer 99.6 3.3E-15 1.1E-19 135.6 13.6 140 155-314 46-206 (259)
108 1yzh_A TRNA (guanine-N(7)-)-me 99.6 3.6E-15 1.2E-19 131.4 13.1 132 157-308 41-181 (214)
109 1fp1_D Isoliquiritigenin 2'-O- 99.6 1.2E-15 4E-20 146.0 10.6 138 155-308 207-359 (372)
110 1fp2_A Isoflavone O-methyltran 99.6 3.3E-15 1.1E-19 141.8 12.6 139 155-309 186-341 (352)
111 2ld4_A Anamorsin; methyltransf 99.6 1.6E-15 5.4E-20 129.4 9.4 118 154-304 9-130 (176)
112 3bzb_A Uncharacterized protein 99.6 1.2E-14 4.2E-19 133.7 15.8 142 156-309 78-237 (281)
113 3p2e_A 16S rRNA methylase; met 99.6 2.8E-15 9.5E-20 133.6 10.9 147 156-308 23-184 (225)
114 1nt2_A Fibrillarin-like PRE-rR 99.6 2.1E-14 7.2E-19 126.5 15.7 137 155-314 55-200 (210)
115 2fca_A TRNA (guanine-N(7)-)-me 99.6 5.6E-15 1.9E-19 130.4 11.4 131 157-307 38-177 (213)
116 1l3i_A Precorrin-6Y methyltran 99.6 4.4E-15 1.5E-19 127.3 10.0 126 155-305 31-156 (192)
117 3r0q_C Probable protein argini 99.6 2.3E-15 7.9E-20 144.2 8.9 108 155-269 61-169 (376)
118 3p9n_A Possible methyltransfer 99.6 2.5E-15 8.5E-20 129.7 8.2 109 156-271 43-155 (189)
119 2nxc_A L11 mtase, ribosomal pr 99.6 3.8E-15 1.3E-19 135.1 9.8 128 156-311 119-246 (254)
120 2avn_A Ubiquinone/menaquinone 99.6 9E-15 3.1E-19 132.7 11.8 100 157-270 54-153 (260)
121 3eey_A Putative rRNA methylase 99.6 2.2E-14 7.4E-19 124.3 13.7 111 155-270 20-140 (197)
122 2ipx_A RRNA 2'-O-methyltransfe 99.6 2.3E-14 7.9E-19 127.8 13.4 145 154-315 74-223 (233)
123 3g89_A Ribosomal RNA small sub 99.6 1.2E-14 4.1E-19 131.5 11.1 130 156-309 79-212 (249)
124 3dmg_A Probable ribosomal RNA 99.6 1.1E-14 3.8E-19 139.6 11.3 219 37-271 103-342 (381)
125 2frn_A Hypothetical protein PH 99.6 2.5E-14 8.5E-19 131.4 12.8 130 156-305 124-253 (278)
126 2ozv_A Hypothetical protein AT 99.6 7.6E-14 2.6E-18 126.9 15.8 136 155-311 34-196 (260)
127 3id6_C Fibrillarin-like rRNA/T 99.6 1.2E-13 4.2E-18 123.3 16.7 150 150-316 69-223 (232)
128 3fzg_A 16S rRNA methylase; met 99.5 2.8E-15 9.6E-20 128.7 5.4 119 135-269 33-152 (200)
129 3fpf_A Mtnas, putative unchara 99.5 1.1E-14 3.9E-19 133.9 9.8 103 155-270 120-223 (298)
130 2fyt_A Protein arginine N-meth 99.5 2E-14 6.9E-19 135.8 11.4 104 155-266 62-168 (340)
131 3giw_A Protein of unknown func 99.5 1.5E-14 5E-19 131.7 9.7 158 137-305 61-243 (277)
132 1zg3_A Isoflavanone 4'-O-methy 99.5 1.7E-14 6E-19 137.1 10.7 138 156-309 192-347 (358)
133 2ift_A Putative methylase HI07 99.5 6.3E-15 2.2E-19 128.8 7.0 108 157-271 53-165 (201)
134 2b3t_A Protein methyltransfera 99.5 2.6E-14 8.8E-19 131.0 11.0 131 156-308 108-262 (276)
135 1g8a_A Fibrillarin-like PRE-rR 99.5 1.7E-13 5.7E-18 121.6 15.9 143 155-315 71-218 (227)
136 1dus_A MJ0882; hypothetical pr 99.5 3.1E-14 1.1E-18 122.1 10.8 109 155-271 50-159 (194)
137 3lbf_A Protein-L-isoaspartate 99.5 2.5E-14 8.5E-19 125.2 10.1 102 155-271 75-176 (210)
138 3q7e_A Protein arginine N-meth 99.5 1.8E-14 6.1E-19 136.7 9.7 106 156-267 65-171 (349)
139 2y1w_A Histone-arginine methyl 99.5 2.2E-14 7.5E-19 136.0 10.0 107 155-268 48-154 (348)
140 4dzr_A Protein-(glutamine-N5) 99.5 4.2E-15 1.4E-19 129.9 4.7 132 156-309 29-192 (215)
141 1af7_A Chemotaxis receptor met 99.5 1.2E-14 4E-19 133.2 7.9 112 157-268 105-251 (274)
142 3dxy_A TRNA (guanine-N(7)-)-me 99.5 9.4E-15 3.2E-19 129.6 6.9 108 157-270 34-151 (218)
143 2yxd_A Probable cobalt-precorr 99.5 6.2E-14 2.1E-18 119.2 11.7 122 155-306 33-154 (183)
144 3lec_A NADB-rossmann superfami 99.5 6.1E-14 2.1E-18 124.7 11.8 129 155-308 19-148 (230)
145 3hp7_A Hemolysin, putative; st 99.5 1.6E-14 5.5E-19 133.0 8.3 139 157-310 85-233 (291)
146 1jsx_A Glucose-inhibited divis 99.5 1.1E-13 3.7E-18 120.8 12.9 121 157-307 65-186 (207)
147 1yb2_A Hypothetical protein TA 99.5 4.5E-14 1.5E-18 129.3 10.8 126 155-308 108-236 (275)
148 1g6q_1 HnRNP arginine N-methyl 99.5 3.4E-14 1.2E-18 133.6 9.6 106 156-267 37-143 (328)
149 3uwp_A Histone-lysine N-methyl 99.5 5.4E-14 1.9E-18 134.3 11.0 112 155-273 171-292 (438)
150 3opn_A Putative hemolysin; str 99.5 7.5E-15 2.6E-19 131.4 4.4 142 156-310 36-185 (232)
151 3kr9_A SAM-dependent methyltra 99.5 1.3E-13 4.4E-18 122.4 12.0 128 155-308 13-142 (225)
152 3gdh_A Trimethylguanosine synt 99.5 7.7E-16 2.6E-20 137.9 -2.6 141 157-309 78-219 (241)
153 3gnl_A Uncharacterized protein 99.5 1.1E-13 3.8E-18 124.0 11.3 129 155-308 19-148 (244)
154 2esr_A Methyltransferase; stru 99.5 2.8E-14 9.7E-19 121.5 7.1 108 156-271 30-140 (177)
155 1vbf_A 231AA long hypothetical 99.5 1.3E-13 4.4E-18 122.5 11.6 100 155-271 68-167 (231)
156 4dcm_A Ribosomal RNA large sub 99.5 8.5E-14 2.9E-18 133.2 11.0 111 156-270 221-335 (375)
157 3mb5_A SAM-dependent methyltra 99.5 7E-14 2.4E-18 126.1 9.9 128 155-309 91-222 (255)
158 3bwc_A Spermidine synthase; SA 99.5 5.2E-14 1.8E-18 131.0 9.1 141 156-308 94-239 (304)
159 2pjd_A Ribosomal RNA small sub 99.5 4.5E-14 1.5E-18 133.6 8.3 106 157-271 196-305 (343)
160 2fpo_A Methylase YHHF; structu 99.5 4.2E-14 1.5E-18 123.6 7.5 106 157-271 54-162 (202)
161 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.5E-13 5.1E-18 123.9 11.1 127 155-308 94-223 (258)
162 2h00_A Methyltransferase 10 do 99.5 5.2E-15 1.8E-19 133.7 1.4 145 157-308 65-237 (254)
163 3tfw_A Putative O-methyltransf 99.5 1.4E-13 4.7E-18 124.2 10.7 107 156-272 62-173 (248)
164 2fhp_A Methylase, putative; al 99.5 3.6E-14 1.2E-18 121.5 6.2 108 156-271 43-156 (187)
165 3ckk_A TRNA (guanine-N(7)-)-me 99.5 1E-13 3.6E-18 124.2 9.5 115 155-269 44-168 (235)
166 3b3j_A Histone-arginine methyl 99.5 7.8E-14 2.7E-18 137.5 9.2 106 155-267 156-261 (480)
167 1o9g_A RRNA methyltransferase; 99.5 8.2E-14 2.8E-18 125.6 8.4 111 156-271 50-216 (250)
168 3ntv_A MW1564 protein; rossman 99.5 9.3E-14 3.2E-18 124.0 8.0 106 156-271 70-178 (232)
169 1o54_A SAM-dependent O-methylt 99.5 2.3E-13 8E-18 124.5 10.8 127 155-308 110-238 (277)
170 3u81_A Catechol O-methyltransf 99.5 8.4E-14 2.9E-18 123.2 7.5 108 156-271 57-172 (221)
171 1ej0_A FTSJ; methyltransferase 99.4 8.4E-13 2.9E-17 111.2 13.1 122 155-308 20-160 (180)
172 1dl5_A Protein-L-isoaspartate 99.4 1.8E-13 6E-18 128.1 9.7 103 155-271 73-177 (317)
173 2igt_A SAM dependent methyltra 99.4 3E-13 1E-17 127.3 11.1 131 156-304 152-299 (332)
174 2yxe_A Protein-L-isoaspartate 99.4 2.1E-13 7E-18 119.8 9.2 103 155-271 75-179 (215)
175 3dr5_A Putative O-methyltransf 99.4 1.3E-13 4.4E-18 122.5 7.7 106 157-272 56-166 (221)
176 3tma_A Methyltransferase; thum 99.4 1E-12 3.5E-17 124.7 14.2 131 155-309 201-339 (354)
177 3duw_A OMT, O-methyltransferas 99.4 2.6E-13 8.7E-18 119.9 9.2 107 156-272 57-170 (223)
178 3tr6_A O-methyltransferase; ce 99.4 1.3E-13 4.6E-18 121.8 7.2 106 157-272 64-177 (225)
179 1ws6_A Methyltransferase; stru 99.4 6.5E-14 2.2E-18 118.0 3.7 103 157-271 41-149 (171)
180 3r3h_A O-methyltransferase, SA 99.4 7E-14 2.4E-18 125.9 4.2 106 157-272 60-173 (242)
181 3tm4_A TRNA (guanine N2-)-meth 99.4 1.9E-12 6.4E-17 123.8 14.3 148 156-330 216-370 (373)
182 2gpy_A O-methyltransferase; st 99.4 3.5E-13 1.2E-17 120.1 8.5 106 156-271 53-162 (233)
183 4azs_A Methyltransferase WBDD; 99.4 7.2E-14 2.5E-18 140.8 4.2 107 156-269 65-173 (569)
184 1p91_A Ribosomal RNA large sub 99.4 1.3E-12 4.5E-17 118.7 12.2 97 156-272 84-181 (269)
185 1ixk_A Methyltransferase; open 99.4 9.7E-13 3.3E-17 123.0 11.3 135 155-306 116-272 (315)
186 4hc4_A Protein arginine N-meth 99.4 5.5E-13 1.9E-17 127.1 9.7 104 157-267 83-187 (376)
187 1u2z_A Histone-lysine N-methyl 99.4 7.9E-13 2.7E-17 128.1 10.5 114 155-275 240-365 (433)
188 1wy7_A Hypothetical protein PH 99.4 3E-12 1E-16 111.6 13.3 126 155-306 47-172 (207)
189 1ne2_A Hypothetical protein TA 99.4 2.6E-12 8.8E-17 111.6 12.3 117 156-305 50-166 (200)
190 2plw_A Ribosomal RNA methyltra 99.4 4.6E-12 1.6E-16 109.8 13.9 121 155-307 20-177 (201)
191 2vdv_E TRNA (guanine-N(7)-)-me 99.4 8.6E-13 2.9E-17 118.7 9.3 115 155-269 47-173 (246)
192 3adn_A Spermidine synthase; am 99.4 1.7E-12 6E-17 120.0 11.3 113 156-269 82-198 (294)
193 1jg1_A PIMT;, protein-L-isoasp 99.4 1.2E-12 4E-17 116.9 9.7 102 155-271 89-191 (235)
194 3c3p_A Methyltransferase; NP_9 99.4 5.2E-13 1.8E-17 117.0 7.2 104 157-271 56-162 (210)
195 1i9g_A Hypothetical protein RV 99.4 1.3E-12 4.6E-17 119.3 9.9 127 155-307 97-228 (280)
196 2hnk_A SAM-dependent O-methylt 99.4 6.4E-13 2.2E-17 118.9 7.5 107 156-272 59-184 (239)
197 3sso_A Methyltransferase; macr 99.4 4.2E-13 1.4E-17 127.8 5.7 141 139-302 203-360 (419)
198 1sui_A Caffeoyl-COA O-methyltr 99.4 8.7E-13 3E-17 119.0 7.5 106 157-272 79-193 (247)
199 2yvl_A TRMI protein, hypotheti 99.4 3.4E-12 1.2E-16 114.3 11.1 103 155-270 89-191 (248)
200 3k6r_A Putative transferase PH 99.4 5.3E-12 1.8E-16 115.6 12.5 131 155-305 123-253 (278)
201 2pbf_A Protein-L-isoaspartate 99.3 9.2E-13 3.1E-17 116.7 7.0 107 155-270 78-194 (227)
202 3lcv_B Sisomicin-gentamicin re 99.3 2.1E-12 7.3E-17 115.8 9.2 154 135-307 116-270 (281)
203 1i1n_A Protein-L-isoaspartate 99.3 1.4E-12 4.8E-17 115.4 7.7 107 155-270 75-183 (226)
204 3gjy_A Spermidine synthase; AP 99.3 1.9E-12 6.5E-17 120.4 8.8 105 159-269 91-200 (317)
205 2qm3_A Predicted methyltransfe 99.3 1.2E-11 4E-16 118.3 14.4 127 157-306 172-306 (373)
206 3cbg_A O-methyltransferase; cy 99.3 2E-12 6.9E-17 115.3 8.1 106 157-272 72-185 (232)
207 3a27_A TYW2, uncharacterized p 99.3 1.6E-12 5.4E-17 119.0 7.1 105 155-272 117-222 (272)
208 2avd_A Catechol-O-methyltransf 99.3 1.8E-12 6E-17 114.9 7.0 107 156-272 68-182 (229)
209 1r18_A Protein-L-isoaspartate( 99.3 1.2E-12 3.9E-17 116.3 5.7 107 155-270 82-195 (227)
210 2oxt_A Nucleoside-2'-O-methylt 99.3 9.2E-13 3.2E-17 120.1 4.9 105 155-269 72-185 (265)
211 3c3y_A Pfomt, O-methyltransfer 99.3 2.6E-12 8.7E-17 115.1 7.7 106 156-271 69-183 (237)
212 2b78_A Hypothetical protein SM 99.3 4.1E-12 1.4E-16 121.9 9.6 139 157-309 212-362 (385)
213 2bm8_A Cephalosporin hydroxyla 99.3 2.7E-12 9.1E-17 115.0 7.1 122 157-304 81-214 (236)
214 1mjf_A Spermidine synthase; sp 99.3 1.5E-12 5.1E-17 119.8 5.0 113 156-269 74-193 (281)
215 1xj5_A Spermidine synthase 1; 99.3 3.1E-12 1.1E-16 120.4 6.6 110 156-269 119-235 (334)
216 2f8l_A Hypothetical protein LM 99.3 2.1E-11 7.2E-16 115.2 12.2 155 156-328 129-306 (344)
217 1nv8_A HEMK protein; class I a 99.3 8.3E-12 2.8E-16 115.0 9.1 106 157-269 123-249 (284)
218 1iy9_A Spermidine synthase; ro 99.3 3.6E-12 1.2E-16 116.9 6.6 109 157-269 75-189 (275)
219 2yxl_A PH0851 protein, 450AA l 99.3 4.8E-11 1.7E-15 116.8 14.8 134 155-305 257-415 (450)
220 2cmg_A Spermidine synthase; tr 99.3 6.9E-12 2.4E-16 114.1 7.8 100 157-269 72-171 (262)
221 2b25_A Hypothetical protein; s 99.3 6.2E-12 2.1E-16 118.4 7.7 148 155-309 103-281 (336)
222 2i7c_A Spermidine synthase; tr 99.3 4.2E-12 1.4E-16 116.9 6.4 112 156-269 77-192 (283)
223 2wa2_A Non-structural protein 99.3 3.7E-12 1.3E-16 116.7 6.0 105 155-269 80-193 (276)
224 2o07_A Spermidine synthase; st 99.3 2.5E-12 8.5E-17 119.6 4.8 110 156-269 94-209 (304)
225 2as0_A Hypothetical protein PH 99.3 6.1E-12 2.1E-16 121.2 7.7 110 157-271 217-337 (396)
226 1uir_A Polyamine aminopropyltr 99.3 4.5E-12 1.6E-16 118.4 6.1 110 156-269 76-195 (314)
227 2b2c_A Spermidine synthase; be 99.2 3.9E-12 1.3E-16 118.8 5.6 111 156-269 107-222 (314)
228 3v97_A Ribosomal RNA large sub 99.2 8.7E-12 3E-16 128.3 8.7 130 157-305 539-678 (703)
229 3frh_A 16S rRNA methylase; met 99.2 1.8E-11 6.2E-16 108.7 9.2 103 156-269 104-206 (253)
230 3ajd_A Putative methyltransfer 99.2 5.9E-12 2E-16 115.3 6.0 135 155-306 81-238 (274)
231 2yx1_A Hypothetical protein MJ 99.2 2E-11 6.8E-16 115.1 9.8 123 156-309 194-317 (336)
232 2pt6_A Spermidine synthase; tr 99.2 7E-12 2.4E-16 117.4 6.4 111 156-269 115-230 (321)
233 1zq9_A Probable dimethyladenos 99.2 2.5E-11 8.7E-16 111.7 9.8 103 155-266 26-144 (285)
234 3dou_A Ribosomal RNA large sub 99.2 3.2E-11 1.1E-15 104.5 9.4 123 155-310 23-165 (191)
235 4dmg_A Putative uncharacterize 99.2 5.7E-11 2E-15 114.1 11.5 107 156-270 213-327 (393)
236 3c0k_A UPF0064 protein YCCW; P 99.2 3.1E-11 1E-15 116.3 9.4 134 157-303 220-364 (396)
237 1inl_A Spermidine synthase; be 99.2 1.3E-11 4.3E-16 114.4 6.4 109 157-269 90-205 (296)
238 2nyu_A Putative ribosomal RNA 99.2 1.5E-11 5.3E-16 105.9 5.6 99 155-270 20-146 (196)
239 1wxx_A TT1595, hypothetical pr 99.2 1.8E-11 6.2E-16 117.3 6.5 108 157-271 209-327 (382)
240 3m6w_A RRNA methylase; rRNA me 99.1 7.5E-11 2.6E-15 115.3 9.1 134 155-306 99-256 (464)
241 1sqg_A SUN protein, FMU protei 99.1 9.4E-11 3.2E-15 114.1 9.6 133 155-305 244-400 (429)
242 1uwv_A 23S rRNA (uracil-5-)-me 99.1 7.5E-10 2.6E-14 107.8 15.2 133 155-315 284-420 (433)
243 2frx_A Hypothetical protein YE 99.1 1.5E-10 5.1E-15 114.0 10.2 107 157-269 117-246 (479)
244 2p41_A Type II methyltransfera 99.1 1.9E-11 6.4E-16 113.7 3.4 103 155-269 80-191 (305)
245 3m4x_A NOL1/NOP2/SUN family pr 99.1 9.5E-11 3.3E-15 114.4 8.1 135 155-306 103-260 (456)
246 2ih2_A Modification methylase 99.1 3.9E-10 1.3E-14 108.9 12.2 143 156-325 38-209 (421)
247 2okc_A Type I restriction enzy 99.1 7E-10 2.4E-14 108.4 12.0 159 155-327 169-357 (445)
248 2jjq_A Uncharacterized RNA met 99.0 7.2E-10 2.5E-14 107.6 10.3 100 156-270 289-388 (425)
249 2xyq_A Putative 2'-O-methyl tr 99.0 5.6E-10 1.9E-14 102.7 9.1 117 155-307 61-195 (290)
250 1qam_A ERMC' methyltransferase 99.0 1.3E-09 4.4E-14 98.0 11.1 76 155-240 28-104 (244)
251 2h1r_A Dimethyladenosine trans 99.0 4.9E-10 1.7E-14 103.8 8.4 79 155-242 40-118 (299)
252 1yub_A Ermam, rRNA methyltrans 99.0 3.9E-12 1.3E-16 114.4 -5.8 103 155-269 27-145 (245)
253 3gru_A Dimethyladenosine trans 99.0 2.1E-09 7.3E-14 99.2 10.9 79 155-242 48-126 (295)
254 2qfm_A Spermine synthase; sper 99.0 5.5E-10 1.9E-14 105.2 6.6 114 156-269 187-314 (364)
255 3ldu_A Putative methylase; str 99.0 2E-09 6.8E-14 103.2 10.0 110 155-270 193-345 (385)
256 3k0b_A Predicted N6-adenine-sp 98.9 2.2E-09 7.4E-14 103.1 10.0 110 155-270 199-351 (393)
257 3ldg_A Putative uncharacterize 98.9 5.2E-09 1.8E-13 100.2 12.5 110 155-270 192-344 (384)
258 3tqs_A Ribosomal RNA small sub 98.8 6.5E-09 2.2E-13 94.0 8.2 77 155-241 27-107 (255)
259 3fut_A Dimethyladenosine trans 98.8 8.8E-09 3E-13 93.9 8.3 77 155-242 45-122 (271)
260 3bt7_A TRNA (uracil-5-)-methyl 98.8 3E-08 1E-12 94.5 12.1 128 158-315 214-357 (369)
261 3b5i_A S-adenosyl-L-methionine 98.8 2.2E-07 7.4E-12 88.3 17.4 171 138-308 32-297 (374)
262 3evf_A RNA-directed RNA polyme 98.8 6.5E-09 2.2E-13 93.7 6.0 106 155-269 72-184 (277)
263 2b9e_A NOL1/NOP2/SUN domain fa 98.7 3.1E-08 1.1E-12 92.0 10.2 108 155-269 100-234 (309)
264 2efj_A 3,7-dimethylxanthine me 98.7 1.2E-07 4.2E-12 90.2 14.3 142 158-307 53-290 (384)
265 3axs_A Probable N(2),N(2)-dime 98.7 5E-09 1.7E-13 100.3 4.7 103 156-269 51-158 (392)
266 2dul_A N(2),N(2)-dimethylguano 98.7 5.2E-09 1.8E-13 99.9 3.6 101 157-269 47-164 (378)
267 2r6z_A UPF0341 protein in RSP 98.7 6.3E-09 2.1E-13 94.3 2.9 81 156-242 82-173 (258)
268 4gqb_A Protein arginine N-meth 98.7 8.2E-08 2.8E-12 96.8 11.0 103 157-266 357-464 (637)
269 3ftd_A Dimethyladenosine trans 98.7 3.9E-08 1.3E-12 88.5 7.6 75 155-240 29-105 (249)
270 2ar0_A M.ecoki, type I restric 98.6 1.6E-07 5.6E-12 93.7 12.0 165 155-329 167-364 (541)
271 3o4f_A Spermidine synthase; am 98.6 2.3E-07 7.9E-12 85.0 11.3 113 156-269 82-198 (294)
272 3v97_A Ribosomal RNA large sub 98.6 1.6E-07 5.6E-12 96.5 10.8 110 155-269 188-347 (703)
273 1m6y_A S-adenosyl-methyltransf 98.6 4.6E-08 1.6E-12 90.5 5.2 78 155-239 24-107 (301)
274 1qyr_A KSGA, high level kasuga 98.6 5.9E-08 2E-12 87.5 5.8 76 155-241 19-101 (252)
275 3uzu_A Ribosomal RNA small sub 98.5 1.3E-07 4.4E-12 86.6 7.2 77 155-241 40-125 (279)
276 1m6e_X S-adenosyl-L-methionnin 98.5 4.7E-07 1.6E-11 85.4 10.7 146 156-306 50-277 (359)
277 3gcz_A Polyprotein; flavivirus 98.5 4.2E-08 1.4E-12 88.6 3.3 106 155-269 88-201 (282)
278 3khk_A Type I restriction-modi 98.4 9E-07 3.1E-11 88.3 11.4 158 159-329 246-448 (544)
279 3cvo_A Methyltransferase-like 98.4 1.3E-06 4.4E-11 75.9 10.9 100 157-268 30-153 (202)
280 3ua3_A Protein arginine N-meth 98.4 1.3E-07 4.4E-12 95.5 4.0 103 158-266 410-531 (745)
281 2qy6_A UPF0209 protein YFCK; s 98.4 4.7E-07 1.6E-11 81.8 7.1 133 156-306 59-232 (257)
282 3ll7_A Putative methyltransfer 98.4 8.8E-08 3E-12 92.0 2.3 74 157-237 93-170 (410)
283 3c6k_A Spermine synthase; sper 98.4 4.5E-07 1.5E-11 85.7 6.5 114 156-269 204-331 (381)
284 2oyr_A UPF0341 protein YHIQ; a 98.3 1.1E-07 3.7E-12 85.9 1.7 104 156-263 85-194 (258)
285 3eld_A Methyltransferase; flav 98.3 7.3E-07 2.5E-11 81.0 7.1 106 155-269 79-191 (300)
286 3lkd_A Type I restriction-modi 98.3 1.5E-05 5E-10 79.5 16.6 157 156-326 220-407 (542)
287 3s1s_A Restriction endonucleas 98.2 4.1E-06 1.4E-10 85.9 10.8 113 156-270 320-466 (878)
288 4auk_A Ribosomal RNA large sub 98.1 2.3E-05 8E-10 73.7 12.8 146 155-325 209-354 (375)
289 4fzv_A Putative methyltransfer 98.1 6.7E-06 2.3E-10 77.7 8.4 115 155-269 146-284 (359)
290 2k4m_A TR8_protein, UPF0146 pr 98.1 3.9E-06 1.3E-10 68.4 5.7 85 156-269 34-121 (153)
291 3lkz_A Non-structural protein 98.0 1.9E-05 6.4E-10 71.5 9.7 177 72-269 17-204 (321)
292 2wk1_A NOVP; transferase, O-me 98.0 9.6E-06 3.3E-10 74.0 7.3 128 156-303 105-266 (282)
293 2px2_A Genome polyprotein [con 98.0 1E-05 3.5E-10 72.0 6.6 104 155-269 71-183 (269)
294 2vz8_A Fatty acid synthase; tr 97.8 1.9E-06 6.4E-11 99.5 -1.5 141 156-307 1239-1393(2512)
295 1wg8_A Predicted S-adenosylmet 97.8 4.2E-05 1.4E-09 69.3 7.5 73 155-238 20-97 (285)
296 3p8z_A Mtase, non-structural p 97.8 8.8E-05 3E-09 65.1 8.9 105 155-269 76-186 (267)
297 3g7u_A Cytosine-specific methy 97.6 0.00083 2.8E-08 63.8 13.5 148 159-326 3-172 (376)
298 3ufb_A Type I restriction-modi 97.5 0.0004 1.4E-08 69.0 10.6 109 155-269 215-362 (530)
299 1g55_A DNA cytosine methyltran 97.3 0.00062 2.1E-08 63.8 8.9 145 159-325 3-168 (343)
300 2zig_A TTHA0409, putative modi 97.1 0.00072 2.5E-08 62.0 6.6 46 156-202 234-279 (297)
301 2c7p_A Modification methylase 97.1 0.0044 1.5E-07 57.6 11.8 148 158-326 11-173 (327)
302 2uyo_A Hypothetical protein ML 96.9 0.0062 2.1E-07 56.2 10.6 142 159-305 104-275 (310)
303 3qv2_A 5-cytosine DNA methyltr 96.8 0.0081 2.8E-07 55.8 11.1 148 157-325 9-179 (327)
304 1rjd_A PPM1P, carboxy methyl t 96.8 0.0051 1.7E-07 57.3 9.7 144 157-302 97-281 (334)
305 1i4w_A Mitochondrial replicati 96.6 0.0042 1.4E-07 58.3 7.3 59 157-224 58-117 (353)
306 4h0n_A DNMT2; SAH binding, tra 96.4 0.024 8.2E-07 52.7 11.7 144 159-325 4-168 (333)
307 2oo3_A Protein involved in cat 96.3 0.0032 1.1E-07 57.0 4.7 145 158-325 92-244 (283)
308 3vyw_A MNMC2; tRNA wobble urid 96.3 0.014 4.7E-07 53.6 8.7 130 156-307 95-246 (308)
309 3r24_A NSP16, 2'-O-methyl tran 96.3 0.0035 1.2E-07 56.7 4.6 117 155-308 107-240 (344)
310 3tka_A Ribosomal RNA small sub 96.2 0.007 2.4E-07 56.1 6.5 72 155-236 55-134 (347)
311 3ubt_Y Modification methylase 96.0 0.068 2.3E-06 49.2 12.3 146 160-325 2-162 (331)
312 1g60_A Adenine-specific methyl 96.0 0.011 3.6E-07 53.0 6.3 57 140-202 200-256 (260)
313 3me5_A Cytosine-specific methy 95.6 0.091 3.1E-06 51.2 11.7 153 157-325 87-287 (482)
314 1zkd_A DUF185; NESG, RPR58, st 95.0 0.082 2.8E-06 50.0 8.8 47 156-202 79-133 (387)
315 3tos_A CALS11; methyltransfera 94.8 0.27 9.2E-06 43.8 11.3 132 156-305 68-243 (257)
316 1f8f_A Benzyl alcohol dehydrog 94.3 0.14 4.7E-06 47.9 8.8 96 155-270 188-290 (371)
317 4ej6_A Putative zinc-binding d 94.2 0.26 9E-06 46.1 10.3 99 155-270 180-285 (370)
318 3swr_A DNA (cytosine-5)-methyl 94.0 0.31 1.1E-05 51.6 11.3 150 156-325 538-721 (1002)
319 3two_A Mannitol dehydrogenase; 93.8 0.082 2.8E-06 49.0 6.0 92 155-270 174-266 (348)
320 2zig_A TTHA0409, putative modi 93.7 0.11 3.8E-06 47.2 6.7 91 213-306 21-133 (297)
321 1pqw_A Polyketide synthase; ro 93.7 0.18 6.2E-06 42.4 7.6 92 155-270 36-138 (198)
322 2dph_A Formaldehyde dismutase; 93.7 0.11 3.8E-06 49.1 6.8 102 155-269 183-299 (398)
323 3s2e_A Zinc-containing alcohol 93.6 0.17 5.7E-06 46.7 7.7 95 155-269 164-263 (340)
324 1pl8_A Human sorbitol dehydrog 93.1 0.54 1.8E-05 43.5 10.5 95 155-269 169-273 (356)
325 2py6_A Methyltransferase FKBM; 93.1 0.15 5E-06 48.7 6.6 48 155-202 224-274 (409)
326 3iei_A Leucine carboxyl methyl 93.1 2.9 9.8E-05 38.6 15.2 151 157-309 90-281 (334)
327 1v3u_A Leukotriene B4 12- hydr 93.1 0.22 7.7E-06 45.6 7.7 92 155-269 143-244 (333)
328 1e3j_A NADP(H)-dependent ketos 93.0 0.41 1.4E-05 44.2 9.4 95 155-269 166-271 (352)
329 3fpc_A NADP-dependent alcohol 92.9 0.38 1.3E-05 44.5 9.0 96 155-270 164-267 (352)
330 3m6i_A L-arabinitol 4-dehydrog 92.8 0.53 1.8E-05 43.6 9.9 97 155-269 177-283 (363)
331 1kol_A Formaldehyde dehydrogen 92.7 0.34 1.2E-05 45.7 8.6 100 155-269 183-300 (398)
332 2j3h_A NADP-dependent oxidored 92.6 0.3 1E-05 45.0 7.8 96 155-269 153-255 (345)
333 4ft4_B DNA (cytosine-5)-methyl 92.5 0.99 3.4E-05 46.6 12.4 47 156-202 210-262 (784)
334 4b7c_A Probable oxidoreductase 92.4 0.3 1E-05 44.9 7.5 95 155-269 147-248 (336)
335 3uog_A Alcohol dehydrogenase; 92.3 0.32 1.1E-05 45.2 7.8 96 154-270 186-288 (363)
336 1uuf_A YAHK, zinc-type alcohol 92.2 0.12 4.1E-06 48.5 4.6 95 155-269 192-288 (369)
337 2qrv_A DNA (cytosine-5)-methyl 92.0 0.31 1.1E-05 44.3 7.0 140 155-318 13-175 (295)
338 3ps9_A TRNA 5-methylaminomethy 91.7 0.25 8.6E-06 50.1 6.6 133 157-307 66-239 (676)
339 3pvc_A TRNA 5-methylaminomethy 91.6 0.19 6.4E-06 51.2 5.6 133 157-307 58-231 (689)
340 3ip1_A Alcohol dehydrogenase, 91.6 1.5 5.1E-05 41.3 11.5 101 154-269 210-318 (404)
341 1rjw_A ADH-HT, alcohol dehydro 91.4 0.56 1.9E-05 43.1 8.2 93 155-269 162-261 (339)
342 3gms_A Putative NADPH:quinone 91.2 0.6 2.1E-05 42.9 8.1 96 154-270 141-244 (340)
343 1cdo_A Alcohol dehydrogenase; 90.9 1.2 4.2E-05 41.4 10.1 96 155-270 190-295 (374)
344 2h6e_A ADH-4, D-arabinose 1-de 90.8 0.099 3.4E-06 48.3 2.4 96 155-269 169-269 (344)
345 4f3n_A Uncharacterized ACR, CO 90.7 0.35 1.2E-05 46.3 6.2 44 158-201 138-187 (432)
346 2hcy_A Alcohol dehydrogenase 1 90.7 0.29 1E-05 45.2 5.5 94 155-270 167-270 (347)
347 1p0f_A NADP-dependent alcohol 90.6 0.6 2.1E-05 43.5 7.7 95 155-269 189-293 (373)
348 1jvb_A NAD(H)-dependent alcoho 90.6 0.5 1.7E-05 43.5 7.1 95 155-269 168-271 (347)
349 2d8a_A PH0655, probable L-thre 90.6 1.6 5.3E-05 40.2 10.4 94 155-269 166-267 (348)
350 1boo_A Protein (N-4 cytosine-s 90.5 0.31 1.1E-05 44.8 5.5 88 213-305 14-116 (323)
351 2fzw_A Alcohol dehydrogenase c 90.4 0.86 2.9E-05 42.4 8.5 95 155-269 188-292 (373)
352 3av4_A DNA (cytosine-5)-methyl 90.3 2.4 8E-05 46.3 12.7 149 157-325 850-1032(1330)
353 3qwb_A Probable quinone oxidor 90.2 0.91 3.1E-05 41.5 8.4 95 154-269 145-247 (334)
354 3jv7_A ADH-A; dehydrogenase, n 90.2 0.41 1.4E-05 44.1 6.1 95 155-270 169-271 (345)
355 1e3i_A Alcohol dehydrogenase, 90.2 1.6 5.4E-05 40.6 10.2 96 155-270 193-298 (376)
356 2jhf_A Alcohol dehydrogenase E 90.2 0.75 2.6E-05 42.8 7.9 95 155-269 189-293 (374)
357 2eih_A Alcohol dehydrogenase; 90.1 0.95 3.2E-05 41.6 8.4 93 154-269 163-265 (343)
358 3nx4_A Putative oxidoreductase 89.9 1.1 3.6E-05 40.8 8.5 91 160-270 149-242 (324)
359 3jyn_A Quinone oxidoreductase; 89.8 0.86 2.9E-05 41.5 7.9 95 155-270 138-240 (325)
360 4dkj_A Cytosine-specific methy 89.8 1.9 6.4E-05 40.9 10.3 159 159-325 11-237 (403)
361 3uko_A Alcohol dehydrogenase c 89.8 1 3.4E-05 42.0 8.5 96 155-270 191-296 (378)
362 4dvj_A Putative zinc-dependent 89.7 1.8 6.2E-05 40.1 10.2 94 157-269 171-270 (363)
363 1qor_A Quinone oxidoreductase; 89.3 0.97 3.3E-05 41.1 7.8 93 155-270 138-240 (327)
364 4eye_A Probable oxidoreductase 89.3 0.74 2.5E-05 42.3 7.1 94 154-269 156-257 (342)
365 2dq4_A L-threonine 3-dehydroge 89.0 0.62 2.1E-05 42.9 6.3 91 155-269 163-262 (343)
366 1yb5_A Quinone oxidoreductase; 89.0 1.5 5E-05 40.5 8.9 92 155-269 168-269 (351)
367 4dcm_A Ribosomal RNA large sub 89.0 1.6 5.5E-05 40.9 9.2 115 135-269 22-136 (375)
368 3fwz_A Inner membrane protein 88.9 2.8 9.7E-05 32.9 9.4 93 158-269 7-105 (140)
369 1boo_A Protein (N-4 cytosine-s 88.8 0.77 2.6E-05 42.1 6.7 48 155-203 250-297 (323)
370 2c0c_A Zinc binding alcohol de 88.6 1.2 4.2E-05 41.2 8.1 94 155-269 161-261 (362)
371 3goh_A Alcohol dehydrogenase, 88.5 0.63 2.2E-05 42.2 5.9 90 154-269 139-229 (315)
372 2zb4_A Prostaglandin reductase 88.4 1.2 4.1E-05 41.1 7.9 93 155-269 156-260 (357)
373 2j8z_A Quinone oxidoreductase; 88.0 2.1 7.2E-05 39.4 9.3 96 154-270 159-262 (354)
374 3ggo_A Prephenate dehydrogenas 88.0 2.2 7.4E-05 38.9 9.2 89 159-267 34-126 (314)
375 4a2c_A Galactitol-1-phosphate 87.7 3.2 0.00011 37.8 10.3 96 155-270 158-261 (346)
376 1piw_A Hypothetical zinc-type 87.6 0.42 1.4E-05 44.4 4.2 96 155-269 177-276 (360)
377 1wly_A CAAR, 2-haloacrylate re 87.5 1.6 5.3E-05 39.9 8.0 92 155-269 143-244 (333)
378 1vj0_A Alcohol dehydrogenase, 87.4 1.2 4.1E-05 41.6 7.2 96 155-270 193-299 (380)
379 1lss_A TRK system potassium up 87.3 8.3 0.00028 29.4 12.4 90 159-267 5-100 (140)
380 3krt_A Crotonyl COA reductase; 86.8 2.3 8E-05 40.7 9.0 95 154-269 225-344 (456)
381 1xa0_A Putative NADPH dependen 86.6 0.75 2.6E-05 41.9 5.2 97 155-269 146-246 (328)
382 4eez_A Alcohol dehydrogenase 1 86.3 3.5 0.00012 37.6 9.7 98 155-269 161-263 (348)
383 1yqd_A Sinapyl alcohol dehydro 86.3 0.71 2.4E-05 43.0 5.0 94 155-269 184-282 (366)
384 4dup_A Quinone oxidoreductase; 86.2 1.4 4.7E-05 40.7 6.9 96 154-270 164-266 (353)
385 2zwa_A Leucine carboxyl methyl 85.9 8 0.00028 39.1 12.9 149 157-307 107-307 (695)
386 2cf5_A Atccad5, CAD, cinnamyl 85.7 0.47 1.6E-05 44.0 3.4 96 155-269 177-275 (357)
387 3c85_A Putative glutathione-re 85.6 4 0.00014 33.4 8.9 93 158-269 39-139 (183)
388 1eg2_A Modification methylase 85.6 1.3 4.5E-05 40.6 6.2 59 139-203 229-290 (319)
389 2b5w_A Glucose dehydrogenase; 85.4 1.4 4.9E-05 40.6 6.6 90 159-270 174-274 (357)
390 1iz0_A Quinone oxidoreductase; 85.2 0.22 7.5E-06 45.0 0.8 93 155-269 123-218 (302)
391 3fbg_A Putative arginate lyase 84.9 4 0.00014 37.3 9.4 91 157-268 150-247 (346)
392 3oig_A Enoyl-[acyl-carrier-pro 84.8 3.9 0.00013 35.7 8.9 106 158-270 7-148 (266)
393 4eso_A Putative oxidoreductase 84.8 2.3 8E-05 37.1 7.3 101 158-269 8-138 (255)
394 1tt7_A YHFP; alcohol dehydroge 84.1 1.1 3.7E-05 40.9 5.0 98 155-270 147-248 (330)
395 3pxx_A Carveol dehydrogenase; 83.4 3.3 0.00011 36.5 7.8 104 158-269 10-153 (287)
396 3ius_A Uncharacterized conserv 83.0 5.8 0.0002 34.7 9.3 131 159-307 6-150 (286)
397 2cdc_A Glucose dehydrogenase g 83.0 2.2 7.6E-05 39.5 6.7 88 158-270 181-279 (366)
398 3llv_A Exopolyphosphatase-rela 82.3 7.5 0.00026 30.1 8.8 67 159-239 7-79 (141)
399 2vhw_A Alanine dehydrogenase; 82.2 0.41 1.4E-05 45.0 1.3 101 157-269 167-268 (377)
400 1pjc_A Protein (L-alanine dehy 82.2 0.43 1.5E-05 44.5 1.4 98 158-268 167-266 (361)
401 2eez_A Alanine dehydrogenase; 82.2 0.53 1.8E-05 44.1 2.0 100 157-268 165-265 (369)
402 4a0s_A Octenoyl-COA reductase/ 82.0 2.9 9.8E-05 39.8 7.3 98 154-269 217-336 (447)
403 3gaz_A Alcohol dehydrogenase s 81.9 3.4 0.00012 37.8 7.5 92 154-269 147-246 (343)
404 3grk_A Enoyl-(acyl-carrier-pro 81.8 4.6 0.00016 36.0 8.2 104 158-270 31-170 (293)
405 3l9w_A Glutathione-regulated p 81.2 5.7 0.00019 37.6 9.0 92 158-268 4-101 (413)
406 3d1l_A Putative NADP oxidoredu 81.0 9.4 0.00032 33.2 9.9 88 159-267 11-100 (266)
407 2vn8_A Reticulon-4-interacting 80.6 0.8 2.7E-05 42.7 2.7 95 155-269 181-280 (375)
408 3tqh_A Quinone oxidoreductase; 79.4 5.3 0.00018 36.0 7.9 93 155-269 150-245 (321)
409 1g60_A Adenine-specific methyl 78.8 3.9 0.00013 36.0 6.5 65 228-307 21-97 (260)
410 3ijr_A Oxidoreductase, short c 78.5 7.1 0.00024 34.7 8.3 104 158-269 47-182 (291)
411 1id1_A Putative potassium chan 77.8 13 0.00044 29.3 8.9 93 159-269 4-105 (153)
412 3g0o_A 3-hydroxyisobutyrate de 77.7 6.3 0.00022 35.3 7.7 89 158-267 7-100 (303)
413 3ek2_A Enoyl-(acyl-carrier-pro 76.9 4.5 0.00015 35.1 6.4 105 156-269 12-153 (271)
414 2g5c_A Prephenate dehydrogenas 76.5 13 0.00044 32.6 9.4 88 160-267 3-94 (281)
415 3gqv_A Enoyl reductase; medium 76.4 11 0.00037 34.8 9.2 93 156-269 163-263 (371)
416 2f1k_A Prephenate dehydrogenas 76.3 12 0.00041 32.7 9.1 86 160-267 2-89 (279)
417 4fs3_A Enoyl-[acyl-carrier-pro 76.1 9.6 0.00033 33.2 8.3 107 157-270 5-147 (256)
418 3edm_A Short chain dehydrogena 76.0 5.4 0.00018 34.8 6.6 104 158-269 8-143 (259)
419 3ce6_A Adenosylhomocysteinase; 75.7 4 0.00014 39.7 6.1 90 155-269 271-361 (494)
420 3c24_A Putative oxidoreductase 75.7 11 0.00037 33.4 8.6 84 159-266 12-98 (286)
421 2ew2_A 2-dehydropantoate 2-red 75.3 13 0.00044 32.9 9.2 102 159-268 4-107 (316)
422 2g1u_A Hypothetical protein TM 73.9 6.4 0.00022 31.3 6.1 96 156-269 17-118 (155)
423 3v2g_A 3-oxoacyl-[acyl-carrier 73.6 12 0.00042 32.7 8.4 105 157-269 30-165 (271)
424 2rir_A Dipicolinate synthase, 73.6 7.5 0.00026 34.8 7.1 89 156-268 155-245 (300)
425 2km1_A Protein DRE2; yeast, an 73.4 1.6 5.5E-05 34.7 2.1 41 226-267 55-96 (136)
426 3k96_A Glycerol-3-phosphate de 73.3 13 0.00045 34.3 8.8 101 158-268 29-132 (356)
427 3l4b_C TRKA K+ channel protien 73.0 21 0.00072 29.9 9.5 91 160-268 2-98 (218)
428 3gt0_A Pyrroline-5-carboxylate 71.4 3.3 0.00011 35.9 4.0 87 159-266 3-94 (247)
429 4g81_D Putative hexonate dehyd 71.4 5.6 0.00019 35.0 5.5 104 158-269 9-145 (255)
430 3b1f_A Putative prephenate deh 71.3 30 0.001 30.3 10.5 88 159-266 7-98 (290)
431 1l7d_A Nicotinamide nucleotide 70.6 1.7 5.7E-05 40.8 2.0 42 157-198 171-213 (384)
432 3lyl_A 3-oxoacyl-(acyl-carrier 70.5 8.9 0.00031 32.8 6.6 75 158-240 5-92 (247)
433 3d4o_A Dipicolinate synthase s 69.6 11 0.00036 33.7 7.1 88 157-268 154-243 (293)
434 1qsg_A Enoyl-[acyl-carrier-pro 69.4 22 0.00075 30.7 9.0 100 158-269 9-148 (265)
435 4e21_A 6-phosphogluconate dehy 69.2 8.2 0.00028 35.8 6.4 116 159-307 23-140 (358)
436 3r3s_A Oxidoreductase; structu 68.7 9.8 0.00033 33.8 6.6 105 158-270 49-186 (294)
437 2h78_A Hibadh, 3-hydroxyisobut 68.5 9.8 0.00034 33.8 6.6 112 159-305 4-120 (302)
438 4dio_A NAD(P) transhydrogenase 68.4 1.4 4.8E-05 41.8 0.9 42 157-198 189-231 (405)
439 3abi_A Putative uncharacterize 68.1 4 0.00014 37.8 4.0 67 156-237 14-84 (365)
440 1wma_A Carbonyl reductase [NAD 68.0 3.8 0.00013 35.5 3.6 103 158-269 4-138 (276)
441 3f9i_A 3-oxoacyl-[acyl-carrier 67.7 14 0.00046 31.6 7.2 74 156-240 12-94 (249)
442 3p2y_A Alanine dehydrogenase/p 67.7 1.1 3.9E-05 42.0 0.1 42 157-198 183-225 (381)
443 3is3_A 17BETA-hydroxysteroid d 66.8 15 0.00053 31.9 7.5 105 158-270 18-153 (270)
444 1bg6_A N-(1-D-carboxylethyl)-L 66.8 14 0.00049 33.5 7.5 100 159-268 5-108 (359)
445 2i6t_A Ubiquitin-conjugating e 66.7 11 0.00037 34.0 6.5 99 157-270 13-126 (303)
446 3u5t_A 3-oxoacyl-[acyl-carrier 65.9 13 0.00043 32.5 6.7 104 158-269 27-161 (267)
447 3hwr_A 2-dehydropantoate 2-red 65.6 26 0.00089 31.5 8.9 100 158-269 19-120 (318)
448 2dpo_A L-gulonate 3-dehydrogen 65.5 17 0.00058 33.0 7.6 100 159-266 7-120 (319)
449 3gvp_A Adenosylhomocysteinase 65.4 10 0.00034 36.2 6.1 88 156-268 218-306 (435)
450 3tri_A Pyrroline-5-carboxylate 65.2 13 0.00045 32.9 6.7 87 159-266 4-95 (280)
451 3k31_A Enoyl-(acyl-carrier-pro 65.2 15 0.00051 32.6 7.1 104 158-270 30-169 (296)
452 4e12_A Diketoreductase; oxidor 65.1 18 0.00062 31.9 7.6 100 159-266 5-118 (283)
453 2aef_A Calcium-gated potassium 64.7 40 0.0014 28.4 9.6 92 157-269 8-105 (234)
454 2cvz_A Dehydrogenase, 3-hydrox 64.5 20 0.00069 31.3 7.8 84 160-267 3-88 (289)
455 1zcj_A Peroxisomal bifunctiona 64.0 16 0.00054 35.1 7.4 100 159-267 38-148 (463)
456 3guy_A Short-chain dehydrogena 63.9 31 0.001 29.0 8.7 69 160-239 3-81 (230)
457 1eg2_A Modification methylase 63.7 4.3 0.00015 37.0 3.2 85 214-305 39-136 (319)
458 3trk_A Nonstructural polyprote 63.4 2.6 8.7E-05 37.5 1.5 42 228-269 209-259 (324)
459 3ksu_A 3-oxoacyl-acyl carrier 63.4 12 0.00043 32.4 6.1 103 158-269 11-147 (262)
460 4ezb_A Uncharacterized conserv 63.3 33 0.0011 30.8 9.2 85 159-267 25-119 (317)
461 4dll_A 2-hydroxy-3-oxopropiona 62.6 17 0.0006 32.7 7.1 113 158-305 31-147 (320)
462 1g0o_A Trihydroxynaphthalene r 62.5 16 0.00053 32.1 6.7 105 158-270 29-164 (283)
463 3qha_A Putative oxidoreductase 62.4 6.8 0.00023 35.0 4.2 86 159-267 16-103 (296)
464 2gdz_A NAD+-dependent 15-hydro 62.4 26 0.00088 30.2 8.0 77 158-240 7-96 (267)
465 3e8x_A Putative NAD-dependent 62.1 63 0.0022 26.9 10.4 134 158-308 21-170 (236)
466 3ado_A Lambda-crystallin; L-gu 61.8 11 0.00039 34.3 5.6 102 158-267 6-121 (319)
467 2ae2_A Protein (tropinone redu 61.7 14 0.00047 31.9 6.1 74 158-239 9-96 (260)
468 3dmg_A Probable ribosomal RNA 60.9 11 0.00038 35.2 5.5 94 158-269 46-139 (381)
469 4gwg_A 6-phosphogluconate dehy 60.4 27 0.00092 33.7 8.3 121 159-306 5-127 (484)
470 1e7w_A Pteridine reductase; di 59.9 18 0.00062 31.9 6.7 60 158-225 9-73 (291)
471 1cyd_A Carbonyl reductase; sho 59.8 45 0.0015 28.0 9.0 70 158-239 7-85 (244)
472 3i83_A 2-dehydropantoate 2-red 59.6 35 0.0012 30.6 8.6 96 159-269 3-105 (320)
473 4hp8_A 2-deoxy-D-gluconate 3-d 59.4 27 0.00092 30.5 7.5 69 158-238 9-87 (247)
474 3pdu_A 3-hydroxyisobutyrate de 59.1 12 0.00041 33.0 5.3 111 160-305 3-118 (287)
475 4imr_A 3-oxoacyl-(acyl-carrier 59.0 12 0.00041 32.8 5.3 74 158-239 33-118 (275)
476 2hwk_A Helicase NSP2; rossman 58.7 5.1 0.00018 36.0 2.6 68 229-309 205-281 (320)
477 1zsy_A Mitochondrial 2-enoyl t 58.6 22 0.00077 32.3 7.2 97 155-269 165-270 (357)
478 2h7i_A Enoyl-[acyl-carrier-pro 58.2 8.1 0.00028 33.7 3.9 101 158-269 7-148 (269)
479 4a27_A Synaptic vesicle membra 58.1 9.6 0.00033 34.8 4.6 92 154-269 139-238 (349)
480 4fn4_A Short chain dehydrogena 57.8 19 0.00065 31.5 6.2 104 158-269 7-143 (254)
481 2v6b_A L-LDH, L-lactate dehydr 57.3 58 0.002 29.0 9.6 102 160-270 2-117 (304)
482 2pd4_A Enoyl-[acyl-carrier-pro 57.2 28 0.00095 30.3 7.3 100 158-269 6-144 (275)
483 3imf_A Short chain dehydrogena 56.4 26 0.0009 30.1 7.0 74 158-239 6-92 (257)
484 3qiv_A Short-chain dehydrogena 56.0 20 0.0007 30.6 6.1 75 158-240 9-96 (253)
485 2hmt_A YUAA protein; RCK, KTN, 55.9 39 0.0013 25.5 7.3 91 159-268 7-103 (144)
486 3pi7_A NADH oxidoreductase; gr 55.7 15 0.00053 33.3 5.5 90 159-269 166-263 (349)
487 1yj8_A Glycerol-3-phosphate de 55.4 29 0.001 31.9 7.5 99 159-267 22-139 (375)
488 3h7a_A Short chain dehydrogena 55.3 17 0.00057 31.4 5.4 75 158-240 7-93 (252)
489 1x0v_A GPD-C, GPDH-C, glycerol 55.2 22 0.00075 32.2 6.5 101 159-268 9-123 (354)
490 2iz1_A 6-phosphogluconate dehy 55.0 21 0.00071 34.3 6.6 93 159-266 6-100 (474)
491 2zyd_A 6-phosphogluconate dehy 54.7 20 0.00067 34.6 6.3 93 159-266 16-110 (480)
492 3rd5_A Mypaa.01249.C; ssgcid, 54.6 23 0.0008 31.1 6.4 72 158-240 16-96 (291)
493 1hyh_A L-hicdh, L-2-hydroxyiso 54.3 73 0.0025 28.2 9.8 103 160-270 3-123 (309)
494 3v8b_A Putative dehydrogenase, 54.2 37 0.0013 29.7 7.7 75 158-240 28-115 (283)
495 3ucx_A Short chain dehydrogena 53.9 27 0.00091 30.2 6.6 73 158-238 11-96 (264)
496 3pef_A 6-phosphogluconate dehy 53.7 13 0.00046 32.7 4.6 112 159-305 2-118 (287)
497 4g65_A TRK system potassium up 53.3 19 0.00064 34.5 5.9 65 158-236 3-74 (461)
498 1lld_A L-lactate dehydrogenase 53.1 61 0.0021 28.7 9.1 103 158-270 7-125 (319)
499 3pwz_A Shikimate dehydrogenase 52.8 39 0.0013 29.8 7.5 72 157-241 119-192 (272)
500 1vpd_A Tartronate semialdehyde 52.7 13 0.00043 32.9 4.3 87 159-267 6-97 (299)
No 1
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.97 E-value=4.6e-31 Score=238.92 Aligned_cols=242 Identities=41% Similarity=0.761 Sum_probs=195.5
Q ss_pred cccccccCCCCCCCcccCHHHHHHHhhcCCccchhhhhhHHHhhhhccccccccccccccCcccccccChhhhHHHHHHH
Q 018970 66 SSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQML 145 (348)
Q Consensus 66 ~~~~~~~~~~~~g~~~~~~~~~w~~~l~~~~~~~~~~~~~y~~~~~yW~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 145 (348)
|..+...|.|++|+.|.+.+++|++.+...... ....||....+||+.....+++.++++........ .+...+
T Consensus 12 ~~~~~~~g~d~~~~~~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 85 (254)
T 1xtp_A 12 SRNLPISGRDTNGKTYRSTDEMWKAELTGDLYD--PEKGWYGKALEYWRTVPATVSGVLGGMDHVHDVDI----EGSRNF 85 (254)
T ss_dssp -CCCCCCEEETTSCEESCHHHHHHHHSCSCTTC--TTTCHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHH----HHHHHH
T ss_pred cccccccccCCCCcccccHHHHHHHHHhccccc--cchhhhhhhhhHHhcCCccccceecCcCccCHHHH----HHHHHH
Confidence 566778999999999999999999987764322 22368999999999988877777776544332222 233333
Q ss_pred HhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC
Q 018970 146 LSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (348)
Q Consensus 146 l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 225 (348)
+.. +. ..++.+|||||||+|.++..++..+...|+++|+|+.|++.|++++.. ..++.+.+.|+.+++
T Consensus 86 l~~-l~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 86 IAS-LP---GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG--------MPVGKFILASMETAT 153 (254)
T ss_dssp HHT-ST---TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT--------SSEEEEEESCGGGCC
T ss_pred HHh-hc---ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc--------CCceEEEEccHHHCC
Confidence 332 22 456789999999999999999888766799999999999999999865 256899999999888
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccC-CCceecCCCCceecCHHHHHHHHHhcCCeEE
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR-SGFVLDKEDRSITRSDFYFKELFSRCGLHIY 304 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~-~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v 304 (348)
.++++||+|++..+++|++++++..+++++.++|||||.+++.++... ..+..+.....+.++.+++.++++++||+++
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 233 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVV 233 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEE
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEE
Confidence 777899999999999999877899999999999999999999986432 2334444556667899999999999999999
Q ss_pred EEeecCCCCccceEEEEEEEe
Q 018970 305 KSKDQKGLPEELFAVKMYALT 325 (348)
Q Consensus 305 ~~~~~~~~~~~l~~v~~~~l~ 325 (348)
.......+|..++++.+|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~ 254 (254)
T 1xtp_A 234 KEAFQEEWPTDLFPLKMYALK 254 (254)
T ss_dssp EEEECTTCCTTSCCEEEEEEC
T ss_pred EeeecCCCCchhheEEEEEeC
Confidence 999999999999999999985
No 2
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.95 E-value=6.3e-28 Score=217.30 Aligned_cols=216 Identities=41% Similarity=0.819 Sum_probs=174.2
Q ss_pred hhhhHHHhhhhccccccccccccccCcccccccChhhhHHHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCC
Q 018970 101 KKTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF 180 (348)
Q Consensus 101 ~~~~~y~~~~~yW~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~ 180 (348)
....||+...+||+.....+++++++|..+...+......++..++..... ..++.+|||||||+|.++..++..+.
T Consensus 26 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~~ 102 (241)
T 2ex4_A 26 DEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPN---KTGTSCALDCGAGIGRITKRLLLPLF 102 (241)
T ss_dssp CHHHHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHGGGC-------CCCCSEEEEETCTTTHHHHHTTTTTC
T ss_pred ccchhHHHHHHHHhcCCccccccccCCCCcchhhHHhHHHHHHHHHHhccc---CCCCCEEEEECCCCCHHHHHHHHhcC
Confidence 356788889999999888887777776654444444455555555433211 33578999999999999999887776
Q ss_pred CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCC
Q 018970 181 NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLK 260 (348)
Q Consensus 181 ~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~Lk 260 (348)
..|+++|+|+.|++.|++++...+ ..++.+.+.|+.+++.++++||+|++..+++|+++++...+++++.++||
T Consensus 103 ~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 103 REVDMVDITEDFLVQAKTYLGEEG------KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLR 176 (241)
T ss_dssp SEEEEEESCHHHHHHHHHHTGGGG------GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred CEEEEEeCCHHHHHHHHHHhhhcC------CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcC
Confidence 589999999999999999876521 23688999999888877679999999999999997667899999999999
Q ss_pred CCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeecCCCCccceEEEEEEEe
Q 018970 261 PGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQKGLPEELFAVKMYALT 325 (348)
Q Consensus 261 pgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~~~~~~l~~v~~~~l~ 325 (348)
|||.+++.++.......++.....+.++.+++.++++++||+++.......+|..++|+.+|+|+
T Consensus 177 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~v~~~~l~ 241 (241)
T 2ex4_A 177 PNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR 241 (241)
T ss_dssp EEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECCSCCTTSCEEEEEEEC
T ss_pred CCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecCCCcchhhhhhhheeC
Confidence 99999998876554444555566666799999999999999999999999999999999999985
No 3
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.88 E-value=2e-21 Score=169.72 Aligned_cols=142 Identities=17% Similarity=0.222 Sum_probs=120.7
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeec
Q 018970 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~ 237 (348)
+.+|||||||+|.++..++..+. .|+++|+|+.|++.++++. .++.+.+.|+.+++.++++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH-----------PSVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC-----------TTSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-----------CCCeEEeCcccccccCCCCeEEEEeh
Confidence 57999999999999999998866 5999999999999999884 35889999999888777899999999
Q ss_pred hhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecC-CCCceecCHHHHHHHHHhcCCeEEEEeecCC
Q 018970 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDK-EDRSITRSDFYFKELFSRCGLHIYKSKDQKG 311 (348)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~-~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~~ 311 (348)
.+++|++.+++..+++++.++|||||.+++..........+.. ......++.+++.++++++||+++.......
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 9999998778999999999999999999998765443322222 2233447999999999999999999887765
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.87 E-value=2.3e-21 Score=176.99 Aligned_cols=148 Identities=14% Similarity=0.198 Sum_probs=118.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC---cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCce
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN---EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~---~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 231 (348)
++++.+|||||||+|.++..++..... +|+|+|+|+.|++.|++++...+. ..++++.++|+.+++.+ .|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~-----~~~v~~~~~D~~~~~~~--~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA-----PTPVDVIEGDIRDIAIE--NA 140 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCTTTCCCC--SE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc-----CceEEEeeccccccccc--cc
Confidence 467889999999999999999876432 699999999999999999866443 45799999999998764 69
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce-----------------ecCCC----------Cc
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV-----------------LDKED----------RS 284 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~-----------------~d~~~----------~~ 284 (348)
|+|+++.++||+++++...+|++++++|||||.|++.+........ +.... ..
T Consensus 141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~ 220 (261)
T 4gek_A 141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVM 220 (261)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHC
T ss_pred ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccc
Confidence 9999999999999888889999999999999999998755432110 00000 01
Q ss_pred eecCHHHHHHHHHhcCCeEEEEeec
Q 018970 285 ITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 285 ~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
..++.+++.++|+++||+.++...+
T Consensus 221 ~~~s~~~~~~~L~~AGF~~ve~~fq 245 (261)
T 4gek_A 221 LTDSVETHKARLHKAGFEHSELWFQ 245 (261)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEEE
T ss_pred cCCCHHHHHHHHHHcCCCeEEEEEE
Confidence 2257888999999999998886544
No 5
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.86 E-value=4.3e-21 Score=168.80 Aligned_cols=158 Identities=17% Similarity=0.250 Sum_probs=123.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++..+. .|+++|+|+.+++.+++++ ++.+...|+.+++ .+++||+|
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------------~~~~~~~d~~~~~-~~~~fD~v 106 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL------------GRPVRTMLFHQLD-AIDAYDAV 106 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH------------TSCCEECCGGGCC-CCSCEEEE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc------------CCceEEeeeccCC-CCCcEEEE
Confidence 45678999999999999999997765 6999999999999999886 2567778888877 55899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcC-CeEEEEeecCCC-
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCG-LHIYKSKDQKGL- 312 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aG-f~~v~~~~~~~~- 312 (348)
++..+++|++++++..+++++.++|||||.+++...................++.+++.++++++| |+++........
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~ 186 (211)
T 3e23_A 107 WAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKG 186 (211)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEEC
T ss_pred EecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCC
Confidence 999999999988899999999999999999999865433222111122223369999999999999 999987654432
Q ss_pred CccceEEEEEEEee
Q 018970 313 PEELFAVKMYALTA 326 (348)
Q Consensus 313 ~~~l~~v~~~~l~~ 326 (348)
+......++++++.
T Consensus 187 ~~~~~~~wl~~~~~ 200 (211)
T 3e23_A 187 FDQELAQFLHVSVR 200 (211)
T ss_dssp TTSCEEEEEEEEEE
T ss_pred CCCCCceEEEEEEe
Confidence 22334556666653
No 6
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.86 E-value=3.8e-21 Score=169.99 Aligned_cols=158 Identities=20% Similarity=0.206 Sum_probs=121.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||||||+|.++..++..+. .|+++|+|+.|++.+++++. .++++.++|+.+++.+ ++||+|+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~d~~~~~~~-~~fD~v~ 111 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP----------KEFSITEGDFLSFEVP-TSIDTIV 111 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC----------TTCCEESCCSSSCCCC-SCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC----------CceEEEeCChhhcCCC-CCeEEEE
Confidence 4667999999999999999998755 69999999999999999874 2588999999998877 8999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCcee--------c--------CCCCceecCHHHHHHHHHhc
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVL--------D--------KEDRSITRSDFYFKELFSRC 299 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~--------d--------~~~~~~~~s~~~l~~l~~~a 299 (348)
+..+++|+++.+...+++++.++|||||.+++.+......... . .....+.++.+++.++++++
T Consensus 112 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 191 (220)
T 3hnr_A 112 STYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENN 191 (220)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHT
T ss_pred ECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHC
Confidence 9999999996555569999999999999999987543321100 0 00111224788999999999
Q ss_pred CCeEEEEeecCCCCccceEEEEEEEeecCCCCccc
Q 018970 300 GLHIYKSKDQKGLPEELFAVKMYALTAEMPRRVSK 334 (348)
Q Consensus 300 Gf~~v~~~~~~~~~~~l~~v~~~~l~~~~~~~~~~ 334 (348)
||+++..... -..|.+...++.++++
T Consensus 192 Gf~v~~~~~~---------~~~w~~~~~~~~~~~~ 217 (220)
T 3hnr_A 192 GFHVTFTRLN---------HFVWVMEATKQLEHHH 217 (220)
T ss_dssp TEEEEEEECS---------SSEEEEEEEECSCCC-
T ss_pred CCEEEEeecc---------ceEEEEeehhhhhhhc
Confidence 9998876543 1244455455665544
No 7
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.85 E-value=1.2e-20 Score=168.55 Aligned_cols=146 Identities=17% Similarity=0.268 Sum_probs=118.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||||||+|.++..++...+ ..|+++|+|+.|++.|++++... .++.+.+.|+.+++.+ ++||+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~~~-~~fD~ 112 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN--------LKVKYIEADYSKYDFE-EKYDM 112 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC--------TTEEEEESCTTTCCCC-SCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC--------CCEEEEeCchhccCCC-CCceE
Confidence 45678999999999999999998863 37999999999999999998763 3799999999998877 89999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce--------------------------ecCCCCceec
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV--------------------------LDKEDRSITR 287 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~--------------------------~d~~~~~~~~ 287 (348)
|++..+++|+++.+...+++++.++|||||.+++.+........ .........+
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDI 192 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhccccccc
Confidence 99999999999766668999999999999999998754332110 0111222336
Q ss_pred CHHHHHHHHHhcCCeEEEEeec
Q 018970 288 SDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 288 s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
+.+++.++++++||+.++....
T Consensus 193 ~~~~~~~ll~~aGF~~v~~~~~ 214 (234)
T 3dtn_A 193 EMNQQLNWLKEAGFRDVSCIYK 214 (234)
T ss_dssp BHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHcCCCceeeeee
Confidence 8899999999999999987654
No 8
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.85 E-value=1e-20 Score=166.19 Aligned_cols=151 Identities=11% Similarity=0.007 Sum_probs=114.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCC----C--cCCCcceeEEEcCCCCCCCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM----A--PDMHKATNFFCVPLQDFTPET 228 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~----~--~~~~~~i~~~~~d~~~~~~~~ 228 (348)
+.++.+|||+|||+|..+..|++++. .|+|+|+|+.|++.|+++....... + .....++++.++|+.++++.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 45678999999999999999998877 5999999999999999886431000 0 000246899999999988654
Q ss_pred -CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 229 -GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 229 -~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
++||+|++..+++|+++++...++++++++|||||.+++........ ......+.++.+++.+++++ ||+++...
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~---~~~~~~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA---LLEGPPFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS---SSSSCCCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc---ccCCCCCCCCHHHHHHHhcC-CcEEEEec
Confidence 68999999999999998778889999999999999844443221111 11122234688999999998 99988766
Q ss_pred ecC
Q 018970 308 DQK 310 (348)
Q Consensus 308 ~~~ 310 (348)
...
T Consensus 175 ~~~ 177 (203)
T 1pjz_A 175 GQD 177 (203)
T ss_dssp ESS
T ss_pred ccc
Confidence 544
No 9
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.84 E-value=2e-20 Score=170.89 Aligned_cols=148 Identities=15% Similarity=0.148 Sum_probs=120.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++.....+|+++|+|+.+++.+++++...++ ..++.+...|+.++++++++||+|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 133 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL-----ANRVTFSYADAMDLPFEDASFDAV 133 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECccccCCCCCCCccEE
Confidence 567889999999999999999877555799999999999999998765433 346999999999988777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce------e----cCCCCceecCHHHHHHHHHhcCCeEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV------L----DKEDRSITRSDFYFKELFSRCGLHIY 304 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~------~----d~~~~~~~~s~~~l~~l~~~aGf~~v 304 (348)
++..+++|++ +...+++++.++|||||.+++.+........ . ........++.+++.++++++||+++
T Consensus 134 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 211 (273)
T 3bus_A 134 WALESLHHMP--DRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVT 211 (273)
T ss_dssp EEESCTTTSS--CHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEE
T ss_pred EEechhhhCC--CHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEE
Confidence 9999999998 6789999999999999999998754332210 0 00112234688999999999999998
Q ss_pred EEeec
Q 018970 305 KSKDQ 309 (348)
Q Consensus 305 ~~~~~ 309 (348)
.....
T Consensus 212 ~~~~~ 216 (273)
T 3bus_A 212 STVDI 216 (273)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 86653
No 10
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.84 E-value=2.1e-20 Score=167.51 Aligned_cols=141 Identities=15% Similarity=0.139 Sum_probs=116.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||||||+|.++..++..+. .|+++|+|+.+++.++++.. ..++++.+.|+.+++.++++||+|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~fD~v~ 121 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGE---------GPDLSFIKGDLSSLPFENEQFEAIM 121 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTC---------BTTEEEEECBTTBCSSCTTCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcc---------cCCceEEEcchhcCCCCCCCccEEE
Confidence 4667999999999999999998766 69999999999999998753 3579999999999887778999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-------eecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-------VLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-------~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+..+++|++ ++..+++++.++|+|||.+++......... ..........++..++.++++++||++++...
T Consensus 122 ~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 122 AINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIG 199 (242)
T ss_dssp EESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeec
Confidence 999999998 778999999999999999999874332211 11222233346889999999999999998663
No 11
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.84 E-value=6.5e-20 Score=168.87 Aligned_cols=146 Identities=16% Similarity=0.138 Sum_probs=117.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++......|+++|+|+.+++.|++++...++ ..++++...|+.+++ ++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN-----LRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC-----CSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-----CCCeEEEECChhhCC---CCeeEE
Confidence 567889999999999999999855444799999999999999998876443 357899999998775 789999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCcee-------------------c-CCCCceecCHHHHHH
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVL-------------------D-KEDRSITRSDFYFKE 294 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~-------------------d-~~~~~~~~s~~~l~~ 294 (348)
++..+++|++++++..+++++.++|||||.+++.+......... . ........+.+++.+
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 213 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQE 213 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHH
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHH
Confidence 99999999976688999999999999999999987543221100 0 011122358899999
Q ss_pred HHHhcCCeEEEEee
Q 018970 295 LFSRCGLHIYKSKD 308 (348)
Q Consensus 295 l~~~aGf~~v~~~~ 308 (348)
+++++||+++....
T Consensus 214 ~l~~aGf~~~~~~~ 227 (287)
T 1kpg_A 214 CASANGFTVTRVQS 227 (287)
T ss_dssp HHHTTTCEEEEEEE
T ss_pred HHHhCCcEEEEEEe
Confidence 99999999998764
No 12
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.84 E-value=2.1e-20 Score=168.97 Aligned_cols=146 Identities=15% Similarity=0.225 Sum_probs=117.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+...|+++|+|+.|++.|+++... .++.+.+.|+.+++.++++||+|
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTS---------PVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCC---------TTEEEEECCGGGCCCCTTCEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhcc---------CCeEEEEcchhhCCCCCCCeEEE
Confidence 346789999999999999999988776799999999999999998752 46899999999988777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccC------CCceecC-------------------------CCC
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR------SGFVLDK-------------------------EDR 283 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~------~~~~~d~-------------------------~~~ 283 (348)
++..+++|++ ++..+++++.++|||||.+++...... ..+..+. ...
T Consensus 113 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (253)
T 3g5l_A 113 LSSLALHYIA--SFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQ 190 (253)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEE
T ss_pred EEchhhhhhh--hHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCc
Confidence 9999999997 788999999999999999999742210 0000000 001
Q ss_pred ceecCHHHHHHHHHhcCCeEEEEeecCC
Q 018970 284 SITRSDFYFKELFSRCGLHIYKSKDQKG 311 (348)
Q Consensus 284 ~~~~s~~~l~~l~~~aGf~~v~~~~~~~ 311 (348)
.+.++.+++.++|+++||+++.......
T Consensus 191 ~~~~t~~~~~~~l~~aGF~~~~~~e~~~ 218 (253)
T 3g5l_A 191 KYHRTVTTYIQTLLKNGFQINSVIEPEP 218 (253)
T ss_dssp EECCCHHHHHHHHHHTTEEEEEEECCCC
T ss_pred cEecCHHHHHHHHHHcCCeeeeeecCCC
Confidence 1224999999999999999998776543
No 13
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.83 E-value=9.4e-20 Score=160.99 Aligned_cols=167 Identities=19% Similarity=0.118 Sum_probs=122.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.++.+|||||||+|.++..++..+. ..|+++|+|+.|++.|++++...++... ...++++.+.|+...+...++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRN-QWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHH-HHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcc-cCcceEEEeCCcccccccCCCcCEE
Confidence 4567999999999999999987765 3799999999999999999876443100 0126999999997776656799999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCC-------ceecCCCCceecCHHHHH----HHHHhcCCeE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG-------FVLDKEDRSITRSDFYFK----ELFSRCGLHI 303 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~-------~~~d~~~~~~~~s~~~l~----~l~~~aGf~~ 303 (348)
++..+++|+++++...+++++.++|||||.+++..+..... ..+....+.+.++.+++. ++++++||++
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v 186 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNV 186 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEE
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceE
Confidence 99999999997777999999999999999888776432100 011122333446888888 8999999998
Q ss_pred EEEeecCCCCccceEEEEEE
Q 018970 304 YKSKDQKGLPEELFAVKMYA 323 (348)
Q Consensus 304 v~~~~~~~~~~~l~~v~~~~ 323 (348)
.........+..-+|..|+.
T Consensus 187 ~~~~~g~~~~~~g~~~q~~~ 206 (217)
T 3jwh_A 187 QFQPIGEADPEVGSPTQMAV 206 (217)
T ss_dssp EECCCSCCCSSSCCSEEEEE
T ss_pred EEEecCCccCCCCchheeEe
Confidence 77544444444344555543
No 14
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.83 E-value=4.5e-20 Score=170.78 Aligned_cols=147 Identities=20% Similarity=0.272 Sum_probs=118.7
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++.....+|+++|+|+.|++.|++++...++ ..++++..+|+.++++++++||+|
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 154 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL-----ADNITVKYGSFLEIPCEDNSYDFI 154 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC-----TTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEEcCcccCCCCCCCEeEE
Confidence 567789999999999999999877333799999999999999988754433 356999999999998877899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce-------ecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV-------LDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~-------~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
++..+++|++ ++..+++++.++|||||.+++.+........ +.........+...+.++++++||+++...
T Consensus 155 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 155 WSQDAFLHSP--DKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred EecchhhhcC--CHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 9999999999 6889999999999999999998754332211 000011123488899999999999999876
Q ss_pred e
Q 018970 308 D 308 (348)
Q Consensus 308 ~ 308 (348)
.
T Consensus 233 ~ 233 (297)
T 2o57_A 233 S 233 (297)
T ss_dssp E
T ss_pred E
Confidence 4
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.83 E-value=4.2e-20 Score=165.54 Aligned_cols=139 Identities=21% Similarity=0.215 Sum_probs=112.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||||||+|.++..++..+. +|+++|+|+.|++.|++++.. ++++.+.|+.++. ++++||+|+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~----------~v~~~~~d~~~~~-~~~~fD~v~ 108 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD----------GITYIHSRFEDAQ-LPRRYDNIV 108 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS----------CEEEEESCGGGCC-CSSCEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC----------CeEEEEccHHHcC-cCCcccEEE
Confidence 3567899999999999999987776 599999999999999998642 5899999998874 458999999
Q ss_pred echhhhcCChhhHHHHHHHHH-HcCCCCcEEEEEecccCCC---------ceec---------CCCCceecCHHHHHHHH
Q 018970 236 VQWCIGHLTDDDFVSFFKRAK-VGLKPGGFFVLKENIARSG---------FVLD---------KEDRSITRSDFYFKELF 296 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~-~~LkpgG~lii~~~~~~~~---------~~~d---------~~~~~~~~s~~~l~~l~ 296 (348)
+..+++|++ ++..+++++. ++|||||.+++........ +... ...+...++.+++.+++
T Consensus 109 ~~~~l~~~~--~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 186 (250)
T 2p7i_A 109 LTHVLEHID--DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDA 186 (250)
T ss_dssp EESCGGGCS--SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHH
T ss_pred EhhHHHhhc--CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHH
Confidence 999999998 7789999999 9999999999987443211 0000 11222346899999999
Q ss_pred HhcCCeEEEEee
Q 018970 297 SRCGLHIYKSKD 308 (348)
Q Consensus 297 ~~aGf~~v~~~~ 308 (348)
+++||+++....
T Consensus 187 ~~~Gf~~~~~~~ 198 (250)
T 2p7i_A 187 SRAGLQVTYRSG 198 (250)
T ss_dssp HHTTCEEEEEEE
T ss_pred HHCCCeEEEEee
Confidence 999999998654
No 16
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.82 E-value=7.6e-20 Score=165.82 Aligned_cols=147 Identities=18% Similarity=0.227 Sum_probs=120.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++.....+|+++|+|+.|++.|+++... ..++++.+.|+.+++.++++||+|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v 124 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG--------NNKIIFEANDILTKEFPENNFDLI 124 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS--------CTTEEEEECCTTTCCCCTTCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc--------CCCeEEEECccccCCCCCCcEEEE
Confidence 567889999999999999999987444799999999999999998765 257999999999988777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecC-------CCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDK-------EDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~-------~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
++..+++|++++++..+++++.++|||||.+++.+........... ..+...++.+++.++++++||+++...
T Consensus 125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 125 YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 9999999997678999999999999999999998754432110000 011223588999999999999998866
Q ss_pred ec
Q 018970 308 DQ 309 (348)
Q Consensus 308 ~~ 309 (348)
..
T Consensus 205 ~~ 206 (266)
T 3ujc_A 205 DL 206 (266)
T ss_dssp EC
T ss_pred eC
Confidence 43
No 17
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.82 E-value=1.8e-19 Score=167.42 Aligned_cols=147 Identities=14% Similarity=0.079 Sum_probs=118.2
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++......|+++|+|+.|++.|++++...++ ..++++...|+.++ +++||+|
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~---~~~fD~v 141 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS-----PRRKEVRIQGWEEF---DEPVDRI 141 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCC-----SSCEEEEECCGGGC---CCCCSEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECCHHHc---CCCccEE
Confidence 577889999999999999999988345799999999999999999876543 34799999999887 4799999
Q ss_pred eechhhhcCCh-------hhHHHHHHHHHHcCCCCcEEEEEecccCCCceec--------------------CCCCceec
Q 018970 235 WVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLD--------------------KEDRSITR 287 (348)
Q Consensus 235 i~~~~l~~~~~-------~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d--------------------~~~~~~~~ 287 (348)
++..+++|+++ ++...+++++.++|||||.+++.+.......... ........
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 221 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLP 221 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCC
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCC
Confidence 99999999943 4678999999999999999999875443221000 01222346
Q ss_pred CHHHHHHHHHhcCCeEEEEeec
Q 018970 288 SDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 288 s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
+.+++.++++++||+++.....
T Consensus 222 s~~~~~~~l~~aGf~~~~~~~~ 243 (302)
T 3hem_A 222 RISQVDYYSSNAGWKVERYHRI 243 (302)
T ss_dssp CHHHHHHHHHHHTCEEEEEEEC
T ss_pred CHHHHHHHHHhCCcEEEEEEeC
Confidence 8899999999999999887653
No 18
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=3.3e-19 Score=161.90 Aligned_cols=165 Identities=13% Similarity=0.085 Sum_probs=121.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCC-------CCCCc----CCCcceeEEEcCCCCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE-------NHMAP----DMHKATNFFCVPLQDF 224 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~-------~~~~~----~~~~~i~~~~~d~~~~ 224 (348)
.++.+|||+|||+|..+..|++.++ .|+|+|+|+.|++.|+++.... ...+. ....+++|.++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4667999999999999999998887 5999999999999998776310 00000 0125799999999998
Q ss_pred CCCC-CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeE
Q 018970 225 TPET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHI 303 (348)
Q Consensus 225 ~~~~-~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~ 303 (348)
+..+ ++||+|++..+++|+++++...+++++.++|||||.|++......... .....+..+.+++.++|.. +|++
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~---~~g~~~~~~~~el~~~l~~-~f~v 221 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK---HAGPPFYVPSAELKRLFGT-KCSM 221 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS---CCCSSCCCCHHHHHHHHTT-TEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc---CCCCCCCCCHHHHHHHhhC-CeEE
Confidence 8653 799999999999999987888999999999999999975432211111 1122234688999999987 5998
Q ss_pred EEEeecCCCC-------ccceEEEEEEEe
Q 018970 304 YKSKDQKGLP-------EELFAVKMYALT 325 (348)
Q Consensus 304 v~~~~~~~~~-------~~l~~v~~~~l~ 325 (348)
+.......+. -..+...+|.|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 250 (252)
T 2gb4_A 222 QCLEEVDALEERHKAWGLDYLFEKLYLLT 250 (252)
T ss_dssp EEEEEEECCCGGGTTTTCSCCEEEEEEEE
T ss_pred EEEeccccchhhhhhcCcchhhheeEEEe
Confidence 8865443322 234566777665
No 19
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.82 E-value=1.1e-19 Score=165.07 Aligned_cols=145 Identities=15% Similarity=0.183 Sum_probs=116.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+. .|+++|+|+.|++.|++++...++ .++.+.++|+.++++++++||+|
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~l~~~~~~fD~V 107 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGH------QQVEYVQGDAEQMPFTDERFHIV 107 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCC-CCCSCTTCEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEecHHhCCCCCCCEEEE
Confidence 45678999999999999999987765 699999999999999998755432 36899999999998877899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce----------ecCCCCceecCHHHHHHHHHhcCCeEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV----------LDKEDRSITRSDFYFKELFSRCGLHIY 304 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~----------~d~~~~~~~~s~~~l~~l~~~aGf~~v 304 (348)
+++.+++|++ ++..+++++.++|||||.|++.+........ .........++.+++.++++++||+++
T Consensus 108 ~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 185 (260)
T 1vl5_A 108 TCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELE 185 (260)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEE
T ss_pred EEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEE
Confidence 9999999999 7789999999999999999998654322210 001112233688899999999999988
Q ss_pred EEee
Q 018970 305 KSKD 308 (348)
Q Consensus 305 ~~~~ 308 (348)
....
T Consensus 186 ~~~~ 189 (260)
T 1vl5_A 186 ELHC 189 (260)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7553
No 20
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.82 E-value=2.2e-19 Score=160.59 Aligned_cols=143 Identities=15% Similarity=0.069 Sum_probs=117.9
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeec
Q 018970 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~ 237 (348)
+.+|||||||+|.++..++..+. .|+++|+|+.+++.|++++...+. ..++++.++|+.+++.. ++||+|++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~fD~v~~~ 139 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPK-----AEYFSFVKEDVFTWRPT-ELFDLIFDY 139 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGG-----GGGEEEECCCTTTCCCS-SCEEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCC-----CcceEEEECchhcCCCC-CCeeEEEEC
Confidence 45999999999999999876555 599999999999999999875322 35799999999998754 699999999
Q ss_pred hhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeecCC
Q 018970 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQKG 311 (348)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~~ 311 (348)
.+++|+++++...+++++.++|||||.|++.+...... .....+.++.+++.++|+++||+++.......
T Consensus 140 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 209 (235)
T 3lcc_A 140 VFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDH----VGGPPYKVDVSTFEEVLVPIGFKAVSVEENPH 209 (235)
T ss_dssp SSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC----CSCSSCCCCHHHHHHHHGGGTEEEEEEEECTT
T ss_pred hhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc----CCCCCccCCHHHHHHHHHHcCCeEEEEEecCC
Confidence 99999998889999999999999999999976443211 11223447899999999999999998776543
No 21
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.82 E-value=2.1e-19 Score=168.02 Aligned_cols=146 Identities=16% Similarity=0.178 Sum_probs=117.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++......|+++|+|+.|++.|++++...++ ..++++...|+.+++ ++||+|
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~---~~fD~v 159 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT-----NRSRQVLLQGWEDFA---EPVDRI 159 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECChHHCC---CCcCEE
Confidence 567889999999999999999977333699999999999999999876543 356899999998775 789999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceec--------------------CCCCceecCHHHHHH
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLD--------------------KEDRSITRSDFYFKE 294 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d--------------------~~~~~~~~s~~~l~~ 294 (348)
++..+++|++++++..+++++.++|||||.+++.+.......... ........+.+++.+
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 239 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVE 239 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHH
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHH
Confidence 999999999877899999999999999999999875543321100 011123358899999
Q ss_pred HHHhcCCeEEEEee
Q 018970 295 LFSRCGLHIYKSKD 308 (348)
Q Consensus 295 l~~~aGf~~v~~~~ 308 (348)
+++++||+++....
T Consensus 240 ~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 240 HGEKAGFTVPEPLS 253 (318)
T ss_dssp HHHHTTCBCCCCEE
T ss_pred HHHhCCCEEEEEEe
Confidence 99999999887554
No 22
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.82 E-value=5.2e-19 Score=156.29 Aligned_cols=157 Identities=17% Similarity=0.124 Sum_probs=118.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.++.+|||||||+|.++..++..+. ..|+++|+|+.+++.|++++...++... ...++++.+.|+...+...++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEM-QRKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHH-HHTTEEEEECCSSSCCGGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccc-cCcceEEEeCcccccccccCCCCEE
Confidence 4567999999999999999987765 3799999999999999999865432100 0127999999998777666899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-------eecCCCCceecCHHHHH----HHHHhcCCeE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-------VLDKEDRSITRSDFYFK----ELFSRCGLHI 303 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-------~~d~~~~~~~~s~~~l~----~l~~~aGf~~ 303 (348)
++..+++|+++++...+++++.++|||||.+++..+...... .+....+.+.++.+++. ++++++||++
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSV 186 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEE
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEE
Confidence 999999999977778999999999999997777654322111 01112333446888887 8899999998
Q ss_pred EEEeecCCCC
Q 018970 304 YKSKDQKGLP 313 (348)
Q Consensus 304 v~~~~~~~~~ 313 (348)
.....-...+
T Consensus 187 ~~~~~g~~~~ 196 (219)
T 3jwg_A 187 RFLQIGEIDD 196 (219)
T ss_dssp EEEEESCCCT
T ss_pred EEEecCCccc
Confidence 7765444433
No 23
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.82 E-value=6.6e-20 Score=164.58 Aligned_cols=144 Identities=10% Similarity=0.054 Sum_probs=115.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC--CCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD 232 (348)
..++.+|||||||+|.++..++..+.. |+++|+|+.|++.++++ +.+...|+.++ ++++++||
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-v~gvD~s~~~~~~a~~~--------------~~~~~~d~~~~~~~~~~~~fD 103 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGIE-SIGVDINEDMIKFCEGK--------------FNVVKSDAIEYLKSLPDKYLD 103 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTCC-EEEECSCHHHHHHHHTT--------------SEEECSCHHHHHHTSCTTCBS
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCCc-EEEEECCHHHHHHHHhh--------------cceeeccHHHHhhhcCCCCee
Confidence 456789999999999999999988764 99999999999998754 56777787764 55668999
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc----eecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF----VLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~----~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+|++..+++|++++++..+++++.++|||||.+++......... .+....+...++.+++.++++++||+++....
T Consensus 104 ~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 104 GVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred EEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEE
Confidence 99999999999988889999999999999999999875543221 01112333446889999999999999998776
Q ss_pred cCCCC
Q 018970 309 QKGLP 313 (348)
Q Consensus 309 ~~~~~ 313 (348)
...++
T Consensus 184 ~~~~~ 188 (240)
T 3dli_A 184 FEECE 188 (240)
T ss_dssp ECCCC
T ss_pred eccCc
Confidence 65444
No 24
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.81 E-value=1.6e-19 Score=163.22 Aligned_cols=145 Identities=16% Similarity=0.064 Sum_probs=117.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++.....+|+++|+|+.|++.|++++...++ ..++++.+.|+.++++ +++||+|
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV-----SERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCCTTCCC-SSCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECChHhCCc-CCCCCEE
Confidence 567789999999999999999977544799999999999999998765433 3479999999999877 6899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc----e---ecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF----V---LDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~----~---~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
++..+++|++ ++..+++++.++|||||.+++.+....... . +........++.+++.++++++||+++...
T Consensus 108 ~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 108 ACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEMV 185 (256)
T ss_dssp EEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEEE
T ss_pred EECCChHhcC--CHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEEE
Confidence 9999999998 678999999999999999999875432211 0 011112233688999999999999987754
No 25
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.81 E-value=1.2e-19 Score=166.93 Aligned_cols=146 Identities=20% Similarity=0.232 Sum_probs=116.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCceeEEe
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~Ii 235 (348)
++.+|||||||+|.++..++..+. .|+++|+|+.|++.|++++...++ ..++++.++|+.+++ ..+++||+|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGV-----SDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CC-----GGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-----CcceEEEEcCHHHhhhhcCCCceEEE
Confidence 367999999999999999998755 699999999999999999876543 367999999999887 5568999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCC-----------cee--------cCCCCceecCHHHHHHHH
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG-----------FVL--------DKEDRSITRSDFYFKELF 296 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~-----------~~~--------d~~~~~~~~s~~~l~~l~ 296 (348)
+..+++|++ ++..+++++.++|||||.+++........ ... ........++.+++.+++
T Consensus 142 ~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 219 (285)
T 4htf_A 142 FHAVLEWVA--DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWL 219 (285)
T ss_dssp EESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHH
T ss_pred ECchhhccc--CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHH
Confidence 999999998 77899999999999999999976322110 000 011222346899999999
Q ss_pred HhcCCeEEEEeecC
Q 018970 297 SRCGLHIYKSKDQK 310 (348)
Q Consensus 297 ~~aGf~~v~~~~~~ 310 (348)
+++||+++......
T Consensus 220 ~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 220 EEAGWQIMGKTGVR 233 (285)
T ss_dssp HHTTCEEEEEEEES
T ss_pred HHCCCceeeeeeEE
Confidence 99999999876654
No 26
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.81 E-value=2.7e-19 Score=157.37 Aligned_cols=142 Identities=20% Similarity=0.262 Sum_probs=112.0
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+. +|+++|+|+.|++.+++. . ..++++.+.|+.++ .++++||+|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~-~---------~~~~~~~~~d~~~~-~~~~~~D~v 111 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGRH-G---------LDNVEFRQQDLFDW-TPDRQWDAV 111 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGGG-C---------CTTEEEEECCTTSC-CCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHhc-C---------CCCeEEEecccccC-CCCCceeEE
Confidence 45667999999999999999998865 699999999999999872 1 25699999999988 556899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce---e-----------cCCCCce-----ecCHHHHHHH
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV---L-----------DKEDRSI-----TRSDFYFKEL 295 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~---~-----------d~~~~~~-----~~s~~~l~~l 295 (348)
++..+++|+++++...+++++.++|||||.+++.+........ + -.....+ .++.+++.++
T Consensus 112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (218)
T 3ou2_A 112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTER 191 (218)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHH
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHH
Confidence 9999999999766799999999999999999998754322110 0 0011111 2488999999
Q ss_pred HHhcCCeEEEEee
Q 018970 296 FSRCGLHIYKSKD 308 (348)
Q Consensus 296 ~~~aGf~~v~~~~ 308 (348)
++++||++.....
T Consensus 192 l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 192 LTALGWSCSVDEV 204 (218)
T ss_dssp HHHTTEEEEEEEE
T ss_pred HHHCCCEEEeeec
Confidence 9999999655443
No 27
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.81 E-value=2.3e-19 Score=160.56 Aligned_cols=144 Identities=18% Similarity=0.230 Sum_probs=116.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||||||+|.++..++..+...|+++|+|+.|++.|+++... .++++.+.|+.+++.++++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---------TGITYERADLDKLHLPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---------SSEEEEECCGGGCCCCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---------CCceEEEcChhhccCCCCCceEEE
Confidence 46779999999999999999987664799999999999999988753 358899999988877678999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccC------CCce----------ecC--------------CCCce
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR------SGFV----------LDK--------------EDRSI 285 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~------~~~~----------~d~--------------~~~~~ 285 (348)
+..+++|++ ++..+++++.++|||||.+++...... ..+. ... ....+
T Consensus 113 ~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (243)
T 3bkw_A 113 SSLALHYVE--DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKH 190 (243)
T ss_dssp EESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEE
T ss_pred Eeccccccc--hHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEE
Confidence 999999998 788999999999999999999753210 0000 000 11223
Q ss_pred ecCHHHHHHHHHhcCCeEEEEeecC
Q 018970 286 TRSDFYFKELFSRCGLHIYKSKDQK 310 (348)
Q Consensus 286 ~~s~~~l~~l~~~aGf~~v~~~~~~ 310 (348)
.++.+++.++++++||+++......
T Consensus 191 ~~t~~~~~~~l~~aGF~~~~~~~~~ 215 (243)
T 3bkw_A 191 HRTVGTTLNALIRSGFAIEHVEEFC 215 (243)
T ss_dssp ECCHHHHHHHHHHTTCEEEEEEECC
T ss_pred eccHHHHHHHHHHcCCEeeeeccCC
Confidence 3689999999999999999877654
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.81 E-value=2.6e-19 Score=157.96 Aligned_cols=146 Identities=13% Similarity=0.153 Sum_probs=119.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-C-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
..++.+|||+|||+|.++..++..+ + ..|+++|+|+.+++.+++++...++ .++.+...|+.+++.++++||
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD 108 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL------KNVEVLKSEENKIPLPDNTVD 108 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECBTTBCSSCSSCEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEecccccCCCCCCCee
Confidence 4567899999999999999999876 2 2799999999999999998765332 368999999999887778999
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeecC
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQK 310 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~ 310 (348)
+|++..+++|++ +...+++++.++|||||.+++.+....... ........++.+++.++++++||+++......
T Consensus 109 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 182 (219)
T 3dh0_A 109 FIFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKEERD--KGPPPEEVYSEWEVGLILEDAGIRVGRVVEVG 182 (219)
T ss_dssp EEEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCCS--SSCCGGGSCCHHHHHHHHHHTTCEEEEEEEET
T ss_pred EEEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEecccccc--cCCchhcccCHHHHHHHHHHCCCEEEEEEeeC
Confidence 999999999998 788999999999999999999875543221 11122233688999999999999999876544
No 29
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.81 E-value=3.3e-20 Score=163.04 Aligned_cols=144 Identities=17% Similarity=0.174 Sum_probs=115.3
Q ss_pred CcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeech
Q 018970 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQW 238 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~~ 238 (348)
.+|||+|||+|.++..++......|+++|+|+.+++.|++++...++ ..++++.+.|+.+++.++++||+|++..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL-----NDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc-----cCceEEEEcCHHHCCCCcccccEEEECc
Confidence 39999999999999999987333799999999999999998765433 3479999999999887778999999999
Q ss_pred hhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce-------ecCC--------CCceecCHHHHHHHHHhcCCeE
Q 018970 239 CIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV-------LDKE--------DRSITRSDFYFKELFSRCGLHI 303 (348)
Q Consensus 239 ~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~-------~d~~--------~~~~~~s~~~l~~l~~~aGf~~ 303 (348)
+++|++ ++..+++++.++|||||.+++.+........ .... .....++.+++.++++++||++
T Consensus 120 ~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 197 (219)
T 3dlc_A 120 SVFFWE--DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISS 197 (219)
T ss_dssp CGGGCS--CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSS
T ss_pred hHhhcc--CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCe
Confidence 999997 7889999999999999999998754332110 0000 1111247789999999999998
Q ss_pred EEEeec
Q 018970 304 YKSKDQ 309 (348)
Q Consensus 304 v~~~~~ 309 (348)
++....
T Consensus 198 v~~~~~ 203 (219)
T 3dlc_A 198 YEIILG 203 (219)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 887644
No 30
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.80 E-value=1.7e-19 Score=163.08 Aligned_cols=145 Identities=15% Similarity=0.101 Sum_probs=117.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++..+...|+++|+|+.+++.|++++...++ ..++++.+.|+.+++.++++||+|
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 118 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC-----ADRVKGITGSMDNLPFQNEELDLI 118 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECChhhCCCCCCCEEEE
Confidence 566789999999999999999988766799999999999999998876544 345999999999988777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-------eecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-------VLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-------~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
++..+++|+. +..+++++.++|||||.+++.+....... .+.. ......+.+++.++++++||+++...
T Consensus 119 ~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 119 WSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMD-AYPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp EEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHH-HCTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred EecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHH-hCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 9999999983 67899999999999999999874321111 0000 00113578899999999999998865
Q ss_pred e
Q 018970 308 D 308 (348)
Q Consensus 308 ~ 308 (348)
.
T Consensus 195 ~ 195 (257)
T 3f4k_A 195 I 195 (257)
T ss_dssp E
T ss_pred E
Confidence 4
No 31
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.80 E-value=2.3e-19 Score=161.11 Aligned_cols=145 Identities=17% Similarity=0.176 Sum_probs=118.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++..+. .|+++|+|+.|++.+++++...++ .++.+...|+.++++++++||+|
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGV------ENVRFQQGTAESLPFPDDSFDII 91 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTC------CSEEEEECBTTBCCSCTTCEEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCC------CCeEEEecccccCCCCCCcEEEE
Confidence 56788999999999999999987765 699999999999999988754322 36899999999988777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCcee----------cCCCCceecCHHHHHHHHHhcCCeEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVL----------DKEDRSITRSDFYFKELFSRCGLHIY 304 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~----------d~~~~~~~~s~~~l~~l~~~aGf~~v 304 (348)
++..+++|++ ++..+++++.++|||||.+++.+......... ....+...++.+++.++++++||+++
T Consensus 92 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~ 169 (239)
T 1xxl_A 92 TCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQ 169 (239)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEE
T ss_pred EECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEE
Confidence 9999999998 78899999999999999999987554322100 01122233688999999999999988
Q ss_pred EEee
Q 018970 305 KSKD 308 (348)
Q Consensus 305 ~~~~ 308 (348)
....
T Consensus 170 ~~~~ 173 (239)
T 1xxl_A 170 DIQK 173 (239)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7554
No 32
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.80 E-value=7.7e-19 Score=159.64 Aligned_cols=141 Identities=20% Similarity=0.275 Sum_probs=112.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||||||+|.++..++..+. .|+++|+|+.|++.|++++. ++.+.+.|+.+++. +++||+|+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~fD~v~ 115 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP-----------DAVLHHGDMRDFSL-GRRFSAVT 115 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTCCC-SCCEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC-----------CCEEEECChHHCCc-cCCcCEEE
Confidence 3567999999999999999987765 59999999999999999863 48899999999877 58999999
Q ss_pred ech-hhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEecccCCCc------------------------------------e
Q 018970 236 VQW-CIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIARSGF------------------------------------V 277 (348)
Q Consensus 236 ~~~-~l~~~~~-~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~------------------------------------~ 277 (348)
+.. +++|+++ ++...+++++.++|||||.|++........+ .
T Consensus 116 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (263)
T 3pfg_A 116 CMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYL 195 (263)
T ss_dssp ECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEE
T ss_pred EcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEE
Confidence 998 9999975 6788999999999999999999642211100 0
Q ss_pred ecCCCC----------ceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 278 LDKEDR----------SITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 278 ~d~~~~----------~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
...... ...++.+++.++|+++||+++.....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~ 237 (263)
T 3pfg_A 196 VAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGG 237 (263)
T ss_dssp EEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST
T ss_pred EecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC
Confidence 000000 11258999999999999999987543
No 33
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.80 E-value=1.7e-19 Score=165.07 Aligned_cols=159 Identities=21% Similarity=0.239 Sum_probs=121.7
Q ss_pred HHHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEE
Q 018970 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF 217 (348)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~ 217 (348)
...+..++..... ..++.+|||||||+|.++..++..++. .|+++|+|+.+++.|++++...+. .++.+.
T Consensus 22 ~~~l~~~l~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~ 92 (276)
T 3mgg_A 22 AETLEKLLHHDTV---YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI------KNVKFL 92 (276)
T ss_dssp -CHHHHHHHTTCC---CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEE
T ss_pred HHHHHHHHhhccc---CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEE
Confidence 3445555544333 567889999999999999999988643 799999999999999998765432 369999
Q ss_pred EcCCCCCCCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecC----------------C
Q 018970 218 CVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDK----------------E 281 (348)
Q Consensus 218 ~~d~~~~~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~----------------~ 281 (348)
..|+.+++.++++||+|+++.+++|++ ++..+++++.++|||||++++.+........... .
T Consensus 93 ~~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (276)
T 3mgg_A 93 QANIFSLPFEDSSFDHIFVCFVLEHLQ--SPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAY 170 (276)
T ss_dssp ECCGGGCCSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHH
T ss_pred EcccccCCCCCCCeeEEEEechhhhcC--CHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHh
Confidence 999999887778999999999999999 6779999999999999999998743321110000 0
Q ss_pred CCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 282 DRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 282 ~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
.....++...+.++|+++||+++....
T Consensus 171 ~~~~~~~~~~l~~~l~~aGf~~v~~~~ 197 (276)
T 3mgg_A 171 MKGNSLVGRQIYPLLQESGFEKIRVEP 197 (276)
T ss_dssp TTCCTTGGGGHHHHHHHTTCEEEEEEE
T ss_pred cCCCcchHHHHHHHHHHCCCCeEEEee
Confidence 011113456789999999999988664
No 34
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.80 E-value=8e-19 Score=156.00 Aligned_cols=153 Identities=17% Similarity=0.166 Sum_probs=119.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+. .|+++|+|+.+++.+++++...++... ...++.+.+.|+.+++.++++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQK-TGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSS-SSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccc-cCcceEEEEecccccCCCCCceeEEE
Confidence 4678999999999999999998855 699999999999999999876543211 12368999999999887778999999
Q ss_pred echhhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEecccCCC--------------------ceec-CC-----CCceecC
Q 018970 236 VQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIARSG--------------------FVLD-KE-----DRSITRS 288 (348)
Q Consensus 236 ~~~~l~~~~~-~d~~~~l~~~~~~LkpgG~lii~~~~~~~~--------------------~~~d-~~-----~~~~~~s 288 (348)
+..+++|+++ ++...+++++.++|||||.+++.+...... +... .. .....++
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 9999999984 335589999999999999999986432110 0000 00 0112369
Q ss_pred HHHHHHHHHhcCCeEEEEeecC
Q 018970 289 DFYFKELFSRCGLHIYKSKDQK 310 (348)
Q Consensus 289 ~~~l~~l~~~aGf~~v~~~~~~ 310 (348)
.+++.++++++||+++......
T Consensus 187 ~~~l~~ll~~aGf~~~~~~~~~ 208 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDYFRVKE 208 (235)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEecc
Confidence 9999999999999999976543
No 35
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.80 E-value=1.7e-19 Score=164.38 Aligned_cols=147 Identities=16% Similarity=0.113 Sum_probs=117.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++......|+++|+|+.+++.|++++...++ ..++++.+.|+.+++.++++||+|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL-----QNRVTGIVGSMDDLPFRNEELDLI 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC-----CcCcEEEEcChhhCCCCCCCEEEE
Confidence 567889999999999999999977444899999999999999998866543 356999999999988777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecC------CCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDK------EDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~------~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
++..+++|+. +..+++++.++|||||.+++.+........... .......+.+.+.++++++||+++....
T Consensus 119 ~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 119 WSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp EESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEE
T ss_pred EEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 9999999983 678999999999999999998754221110000 0001225788999999999999998765
Q ss_pred c
Q 018970 309 Q 309 (348)
Q Consensus 309 ~ 309 (348)
.
T Consensus 196 ~ 196 (267)
T 3kkz_A 196 L 196 (267)
T ss_dssp C
T ss_pred C
Confidence 3
No 36
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.80 E-value=1.1e-18 Score=151.25 Aligned_cols=143 Identities=16% Similarity=0.193 Sum_probs=115.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+. +|+++|+|+.+++.+++++...++ .++.+...|+.+++. +++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~-~~~~D~v~ 102 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENL------DNLHTRVVDLNNLTF-DRQYDFIL 102 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECCGGGCCC-CCCEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCC------CCcEEEEcchhhCCC-CCCceEEE
Confidence 3567999999999999999997755 699999999999999988754321 358999999988877 68999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
+..+++|+++++...+++++.++|||||.+++.+......+.. .....+.++.+++.++|++ |+++.....
T Consensus 103 ~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 103 STVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC-TVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-CSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC-CCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 9999999998889999999999999999988876544332211 1223345688899999987 999886654
No 37
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.80 E-value=2.4e-19 Score=163.59 Aligned_cols=170 Identities=14% Similarity=0.107 Sum_probs=119.0
Q ss_pred HHHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCC-CC----------
Q 018970 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH-MA---------- 207 (348)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~-~~---------- 207 (348)
.+++...+.+.+.. +..++.+|||||||+|.++..++..++.+|+++|+|+.|++.|++++..... ..
T Consensus 38 ~~~~~~~~~~~~~~-~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~ 116 (263)
T 2a14_A 38 LKFNLECLHKTFGP-GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACE 116 (263)
T ss_dssp HHHHHHHHHHHHST-TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHh
Confidence 34454445444321 2456789999999999888877767766799999999999999987644210 00
Q ss_pred ---c-C--------CCccee-EEEcCCCCC-CC---CCCceeEEeechhhhcCC-h-hhHHHHHHHHHHcCCCCcEEEEE
Q 018970 208 ---P-D--------MHKATN-FFCVPLQDF-TP---ETGRYDVIWVQWCIGHLT-D-DDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 208 ---~-~--------~~~~i~-~~~~d~~~~-~~---~~~~fD~Ii~~~~l~~~~-~-~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
. . ...++. +..+|+.+. +. ..++||+|+++.++||+. + +++..++++++++|||||.|+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 117 LEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 0 0 001233 888898874 22 246899999999999963 2 57889999999999999999998
Q ss_pred ecccCCCceecCCC-CceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 269 ENIARSGFVLDKED-RSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 269 ~~~~~~~~~~d~~~-~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
.......+...... ..+.++.+++.++|+++||++++....
T Consensus 197 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 197 VTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp EESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred EeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 75443322211100 112358999999999999999987654
No 38
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.79 E-value=6e-19 Score=164.74 Aligned_cols=147 Identities=13% Similarity=0.052 Sum_probs=118.7
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++......|+++|+|+.|++.|++++...++ ..++++.++|+.++++++++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRI-----DDHVRSRVCNMLDTPFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhcCCCCCCCEeEE
Confidence 567789999999999999999987334699999999999999998876543 357999999999988777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce--------ecCCCCceecCHHHHHHHHHhcCCeEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV--------LDKEDRSITRSDFYFKELFSRCGLHIYKS 306 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~--------~d~~~~~~~~s~~~l~~l~~~aGf~~v~~ 306 (348)
++..+++|++ +..+++++.++|||||.+++.+........ .+.......++.+++.++++++||+++..
T Consensus 190 ~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 190 WNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp EEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred EECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 9999999994 789999999999999999998754333210 00000012358899999999999999987
Q ss_pred eec
Q 018970 307 KDQ 309 (348)
Q Consensus 307 ~~~ 309 (348)
...
T Consensus 267 ~~~ 269 (312)
T 3vc1_A 267 VDL 269 (312)
T ss_dssp EEC
T ss_pred EeC
Confidence 654
No 39
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=2.9e-18 Score=147.70 Aligned_cols=130 Identities=20% Similarity=0.181 Sum_probs=111.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+. .|+++|+|+.+++.+++++. ++.+...|+.+++.++++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFP-----------EARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTSCCCCCCEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCC-----------CCcEEEcccccCCCCCCceeEEE
Confidence 4677999999999999999987755 69999999999999998863 37889999998877668999999
Q ss_pred ec-hhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 236 VQ-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 236 ~~-~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
+. .+++|+++++...+++++.++|+|||.+++...... .++.+.+.++++++||+++.....
T Consensus 113 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~------------~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 113 SAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR------------GWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS------------SCCHHHHHHHHHHHTEEEEEEESS
T ss_pred ECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC------------CcCHHHHHHHHHHcCCEEeeeecc
Confidence 98 789999877889999999999999999999753321 157788999999999999887654
No 40
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.78 E-value=4.5e-18 Score=157.72 Aligned_cols=149 Identities=20% Similarity=0.281 Sum_probs=114.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
++.+|||||||+|.++..++..+. .|+++|+|+.|++.|++++...++ ....++++.+.|+.+++. +++||+|++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~v~~~~~d~~~~~~-~~~fD~v~~ 156 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPA---DVRDRCTLVQGDMSAFAL-DKRFGTVVI 156 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCH---HHHTTEEEEECBTTBCCC-SCCEEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhccc---ccccceEEEeCchhcCCc-CCCcCEEEE
Confidence 345999999999999999998765 599999999999999998865321 001469999999999887 489998885
Q ss_pred -chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCC------------------------c----------eecCC
Q 018970 237 -QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG------------------------F----------VLDKE 281 (348)
Q Consensus 237 -~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~------------------------~----------~~d~~ 281 (348)
..+++|+++++...+++++.++|||||.|++........ + .....
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 3g2m_A 157 SSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPAD 236 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESC
T ss_pred CCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEecc
Confidence 577888887778999999999999999999975322110 0 00000
Q ss_pred ----------CCceecCHHHHHHHHHhcCCeEEEEeecC
Q 018970 282 ----------DRSITRSDFYFKELFSRCGLHIYKSKDQK 310 (348)
Q Consensus 282 ----------~~~~~~s~~~l~~l~~~aGf~~v~~~~~~ 310 (348)
.....++.+++.++++++||+++......
T Consensus 237 ~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 237 ETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp C--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 00112699999999999999999987654
No 41
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.78 E-value=1.9e-18 Score=156.67 Aligned_cols=156 Identities=15% Similarity=0.192 Sum_probs=115.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCC--------------Cc---------CCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM--------------AP---------DMH 211 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~--------------~~---------~~~ 211 (348)
..++.+|||||||+|.++..++..++..|+++|+|+.|++.+++++...+.. +. ...
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3566799999999999999888776646999999999999999988652100 00 000
Q ss_pred cce-eEEEcCCCCCCC-CC---CceeEEeechhhhcCCh--hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCC-C
Q 018970 212 KAT-NFFCVPLQDFTP-ET---GRYDVIWVQWCIGHLTD--DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKED-R 283 (348)
Q Consensus 212 ~~i-~~~~~d~~~~~~-~~---~~fD~Ii~~~~l~~~~~--~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~-~ 283 (348)
.++ .+..+|+.+..+ ++ ++||+|++..+++|+.. +++..+++++.++|||||.|++.+......+...... .
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~ 213 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFS 213 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccc
Confidence 126 899999988653 44 78999999999996543 3788999999999999999999875443222111110 1
Q ss_pred ceecCHHHHHHHHHhcCCeEEEEeecC
Q 018970 284 SITRSDFYFKELFSRCGLHIYKSKDQK 310 (348)
Q Consensus 284 ~~~~s~~~l~~l~~~aGf~~v~~~~~~ 310 (348)
...++.+++.++|+++||+++......
T Consensus 214 ~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 214 SLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 123588899999999999999877544
No 42
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.77 E-value=4.8e-18 Score=162.15 Aligned_cols=149 Identities=15% Similarity=0.177 Sum_probs=120.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC--CCCCCceeE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~ 233 (348)
...+|||||||+|.++..+++.++. +++++|+ +.+++.|++++...++ ..++++...|+.+. +.+ ++||+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~p-~~~D~ 251 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG-----SERIHGHGANLLDRDVPFP-TGFDA 251 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT-----GGGEEEEECCCCSSSCCCC-CCCSE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc-----ccceEEEEccccccCCCCC-CCcCE
Confidence 4579999999999999999987655 7999999 9999999999876543 45799999999886 344 78999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCcee---------------cCCCCceecCHHHHHHHHHh
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVL---------------DKEDRSITRSDFYFKELFSR 298 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~---------------d~~~~~~~~s~~~l~~l~~~ 298 (348)
|++..++|++++++...++++++++|||||.|++.+......... ........++.++|.+++++
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 331 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIEN 331 (363)
T ss_dssp EEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHT
T ss_pred EEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHH
Confidence 999999999998888899999999999999999998665432100 01122234689999999999
Q ss_pred cCCeEEEEeecCCC
Q 018970 299 CGLHIYKSKDQKGL 312 (348)
Q Consensus 299 aGf~~v~~~~~~~~ 312 (348)
+||+++......+.
T Consensus 332 AGf~~v~~~~~~g~ 345 (363)
T 3dp7_A 332 AGLEVEEIQDNIGL 345 (363)
T ss_dssp TTEEESCCCCCBTT
T ss_pred cCCeEEEEEeCCCC
Confidence 99999887655543
No 43
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.77 E-value=7.3e-18 Score=155.39 Aligned_cols=150 Identities=17% Similarity=0.100 Sum_probs=117.2
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-CCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~ 233 (348)
+.++.+|||||||+|.++..++..+...|+++|+|+.|++.|++++...+. ..++.+.++|+.+++. .+++||+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~ 136 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR-----RFKVFFRAQDSYGRHMDLGKEFDV 136 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC-----SSEEEEEESCTTTSCCCCSSCEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CccEEEEECCccccccCCCCCcCE
Confidence 356789999999999999998877665799999999999999998866432 2468999999998876 4689999
Q ss_pred Eeechhhhc--CChhhHHHHHHHHHHcCCCCcEEEEEecccCC-------------Cc--eec-----------------
Q 018970 234 IWVQWCIGH--LTDDDFVSFFKRAKVGLKPGGFFVLKENIARS-------------GF--VLD----------------- 279 (348)
Q Consensus 234 Ii~~~~l~~--~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~-------------~~--~~d----------------- 279 (348)
|++..++|| ...+++..+++++.++|||||.+++....... .+ .++
T Consensus 137 v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l 216 (298)
T 1ri5_A 137 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTL 216 (298)
T ss_dssp EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEE
T ss_pred EEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEE
Confidence 999999998 45568899999999999999999997633110 00 000
Q ss_pred --CC--CCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 280 --KE--DRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 280 --~~--~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
.. .....++.+++.++++++||+++.....
T Consensus 217 ~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 217 LDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp TTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred chhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 00 0012358899999999999999987654
No 44
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.77 E-value=2.4e-18 Score=160.13 Aligned_cols=148 Identities=14% Similarity=0.051 Sum_probs=116.4
Q ss_pred CCCCCcEEEEeccccHHHHHHH-HhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLL-IRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la-~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
+.++.+|||||||+|.++..++ ...+ ..|+++|+|+.+++.|++++...++ ..++++.++|+.+++++ ++||
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~fD 189 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL-----AGQITLHRQDAWKLDTR-EGYD 189 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEECCGGGCCCC-SCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECchhcCCcc-CCeE
Confidence 4577899999999999999885 2332 2799999999999999999987544 34699999999998877 8999
Q ss_pred EEeechhhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEecccCCCc------eecC-----------------CC-Cceec
Q 018970 233 VIWVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIARSGF------VLDK-----------------ED-RSITR 287 (348)
Q Consensus 233 ~Ii~~~~l~~~~~-~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~------~~d~-----------------~~-~~~~~ 287 (348)
+|+++.+++|+++ .....+++++.++|||||.|++.+....... ..+. .. ....+
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (305)
T 3ocj_A 190 LLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALR 269 (305)
T ss_dssp EEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCC
T ss_pred EEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccC
Confidence 9999999999974 3344689999999999999999874432111 0000 00 11226
Q ss_pred CHHHHHHHHHhcCCeEEEEee
Q 018970 288 SDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 288 s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+.+++.++++++||+++....
T Consensus 270 ~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 270 THAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHCCCEEEEEEc
Confidence 899999999999999998875
No 45
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.77 E-value=2.1e-18 Score=150.31 Aligned_cols=141 Identities=19% Similarity=0.150 Sum_probs=111.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++ +|||||||+|.++..++..+. .|+++|+|+.|++.|++++... ..++.+.+.|+.+++.++++||+|+
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v~ 99 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEK-------GVKITTVQSNLADFDIVADAWEGIV 99 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHH-------TCCEEEECCBTTTBSCCTTTCSEEE
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhc-------CCceEEEEcChhhcCCCcCCccEEE
Confidence 345 999999999999999987765 6999999999999999887542 2268899999998887678999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce--ecCCCCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV--LDKEDRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~--~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
++ +.|++.++...+++++.++|||||.+++.......... .........++.+++.++|+ ||+++.....
T Consensus 100 ~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 100 SI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp EE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred EE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEE
Confidence 95 45666678899999999999999999998755433211 01112234579999999999 9999885543
No 46
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.77 E-value=2.4e-18 Score=150.53 Aligned_cols=148 Identities=14% Similarity=0.108 Sum_probs=113.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||+|||+|.++..++.....+|+++|+|+.|++.|++++... ..++.+.+.|+.+++.++++||+|
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v 93 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------NFKLNISKGDIRKLPFKDESMSFV 93 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH-------TCCCCEEECCTTSCCSCTTCEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEECchhhCCCCCCceeEE
Confidence 3456899999999999854444343336999999999999999886532 245889999999988777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-----e-----e---cCCCCc--eecCHHHHHHHHHhc
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-----V-----L---DKEDRS--ITRSDFYFKELFSRC 299 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-----~-----~---d~~~~~--~~~s~~~l~~l~~~a 299 (348)
++..+++|++.++...+++++.++|||||.+++.+....... . + ...... ..++.+++.++|.++
T Consensus 94 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 173 (209)
T 2p8j_A 94 YSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDM 173 (209)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTS
T ss_pred EEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhc
Confidence 999999999777899999999999999999999874432210 0 0 011111 236899999999999
Q ss_pred CCeEEEEeec
Q 018970 300 GLHIYKSKDQ 309 (348)
Q Consensus 300 Gf~~v~~~~~ 309 (348)
||...+....
T Consensus 174 g~~~~~~~~~ 183 (209)
T 2p8j_A 174 KVLFKEDRVV 183 (209)
T ss_dssp EEEEEEEEEE
T ss_pred Cceeeeeeee
Confidence 9987775433
No 47
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=2.6e-18 Score=154.40 Aligned_cols=143 Identities=15% Similarity=0.012 Sum_probs=114.2
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCC-----C
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----G 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~ 229 (348)
+.++.+|||||||+|.++..++..+. +|+++|+|+.|++.|++++.. .++++.+.|+.+++... .
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~ 123 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA---------ANISYRLLDGLVPEQAAQIHSEI 123 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC---------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc---------cCceEEECccccccccccccccc
Confidence 45678999999999999999998887 599999999999999998742 46899999998865321 2
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce------------------ecCCCCceecCHHH
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV------------------LDKEDRSITRSDFY 291 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~------------------~d~~~~~~~~s~~~ 291 (348)
.||+|++..++||+++++...+++++.++|||||.+++.+.....+.. +........++.++
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAED 203 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHH
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHH
Confidence 489999999999999888999999999999999999998754332110 01111122368899
Q ss_pred HHHHHHhcCCeEEEEeec
Q 018970 292 FKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 292 l~~l~~~aGf~~v~~~~~ 309 (348)
+.++| +||+++.....
T Consensus 204 ~~~~~--aGf~~~~~~~~ 219 (245)
T 3ggd_A 204 IELYF--PDFEILSQGEG 219 (245)
T ss_dssp HHHHC--TTEEEEEEECC
T ss_pred HHHHh--CCCEEEecccc
Confidence 99999 99999986543
No 48
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.76 E-value=1.3e-18 Score=153.63 Aligned_cols=137 Identities=20% Similarity=0.214 Sum_probs=105.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC---CCC-CCce
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE-TGRY 231 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~-~~~f 231 (348)
.++.+|||||||+|.++..++..+. +|+++|+|+.|++.++++. ++.+...|+.++ +.. .++|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------------~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAAG------------AGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHTC------------SSCEEECCHHHHHTTCSCCCCCE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhc------------ccccchhhHHhhcccccccCCCc
Confidence 3458999999999999999987755 6999999999999999871 356677766655 322 3469
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc--------e---ecC------CCCceecCHHHHHH
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF--------V---LDK------EDRSITRSDFYFKE 294 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~--------~---~d~------~~~~~~~s~~~l~~ 294 (348)
|+|++..+++ .. ++..+++++.++|||||.+++.+....... . +.. ......++.+++.+
T Consensus 118 D~v~~~~~l~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (227)
T 3e8s_A 118 DLICANFALL-HQ--DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLN 194 (227)
T ss_dssp EEEEEESCCC-SS--CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHH
T ss_pred cEEEECchhh-hh--hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHH
Confidence 9999999999 55 678999999999999999999875432111 0 000 01112359999999
Q ss_pred HHHhcCCeEEEEee
Q 018970 295 LFSRCGLHIYKSKD 308 (348)
Q Consensus 295 l~~~aGf~~v~~~~ 308 (348)
+++++||+++....
T Consensus 195 ~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 195 ALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHTTEEEEEEEC
T ss_pred HHHHcCCeEEEEec
Confidence 99999999998776
No 49
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.76 E-value=8.4e-18 Score=154.71 Aligned_cols=141 Identities=17% Similarity=0.165 Sum_probs=114.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
++.+|||+|||+|.++..++..+. .|+++|+|+.+++.|++++...+ .++++.+.|+.+++. +++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKEN-------LNISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCGGGCCC-CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcC-------CceEEEEeccccccc-cCCccEEEE
Confidence 567999999999999999998866 69999999999999999876532 268999999998776 589999999
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
+.+++|+++++...+++++.++|+|||.+++.......... ......+.++.+++.+++.. |+++.....
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~ 260 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVP-CPLPFSFTFAENELKEYYKD--WEFLEYNEN 260 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC-CSSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCC-CCCCccccCCHHHHHHHhcC--CEEEEEEcc
Confidence 99999999888999999999999999998887654433221 11233455788889999865 888876543
No 50
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.76 E-value=7e-18 Score=150.52 Aligned_cols=102 Identities=19% Similarity=0.268 Sum_probs=89.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+. +|+++|+|+.|++.|+++.. ++.+.+.|+.+++. +++||+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP-----------DATLHQGDMRDFRL-GRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT-----------TCEEEECCTTTCCC-SSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC-----------CCEEEECCHHHccc-CCCCcEEE
Confidence 3567999999999999999998876 69999999999999998853 47899999998876 57899999
Q ss_pred e-chhhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 236 V-QWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 236 ~-~~~l~~~~~-~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+ ..+++|+.+ ++...+++++.++|||||.+++.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 106 SMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp ECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred EcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 5 559999965 6788999999999999999999753
No 51
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.76 E-value=2.1e-18 Score=156.15 Aligned_cols=142 Identities=20% Similarity=0.192 Sum_probs=111.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+. .|+++|+|+.|++.+++++... ..++.+...|+.+++.++++||+|
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v 108 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGV-------DRKVQVVQADARAIPLPDESVHGV 108 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHTTTS-------CTTEEEEESCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcc-------CCceEEEEcccccCCCCCCCeeEE
Confidence 45678999999999999999987754 6999999999999999987221 357999999999988777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccC-CC---c------ee---cC--CCCceecCHHHHHHHHHhc
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR-SG---F------VL---DK--EDRSITRSDFYFKELFSRC 299 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~-~~---~------~~---d~--~~~~~~~s~~~l~~l~~~a 299 (348)
++..++||++ +...+++++.++|||||.+++.-.... .. + .. .. ......++.+++.++++++
T Consensus 109 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (263)
T 2yqz_A 109 IVVHLWHLVP--DWPKVLAEAIRVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRL 186 (263)
T ss_dssp EEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred EECCchhhcC--CHHHHHHHHHHHCCCCcEEEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHc
Confidence 9999999998 788999999999999999998721110 11 0 00 00 0112235778899999999
Q ss_pred CCeEEEE
Q 018970 300 GLHIYKS 306 (348)
Q Consensus 300 Gf~~v~~ 306 (348)
||+++..
T Consensus 187 Gf~~~~~ 193 (263)
T 2yqz_A 187 GLKPRTR 193 (263)
T ss_dssp TCCCEEE
T ss_pred CCCcceE
Confidence 9997664
No 52
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.76 E-value=1.1e-17 Score=149.62 Aligned_cols=144 Identities=19% Similarity=0.301 Sum_probs=113.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
++.+|||||||+|.++..++..+. +|+++|+|+.|++.+++++... ..++.+.+.|+.+++.+ ++||+|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~-~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQ-------GLKPRLACQDISNLNIN-RKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHT-------TCCCEEECCCGGGCCCS-CCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhc-------CCCeEEEecccccCCcc-CCceEEEE
Confidence 667999999999999999987765 5999999999999999987543 12688999999888766 78999999
Q ss_pred ch-hhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEecccC--------CCc---------eecC----------------C
Q 018970 237 QW-CIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIAR--------SGF---------VLDK----------------E 281 (348)
Q Consensus 237 ~~-~l~~~~~-~d~~~~l~~~~~~LkpgG~lii~~~~~~--------~~~---------~~d~----------------~ 281 (348)
.. +++|+++ +++..+++++.++|||||.+++...... ..+ .+.. .
T Consensus 108 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (246)
T 1y8c_A 108 CLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRD 187 (246)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEec
Confidence 98 9999953 5789999999999999999998532110 000 0000 0
Q ss_pred C----------CceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 282 D----------RSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 282 ~----------~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
. ....++.+++.++++++||++++....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 188 GEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp SSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred CCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 0 012259999999999999999987654
No 53
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.76 E-value=4.1e-18 Score=157.26 Aligned_cols=154 Identities=14% Similarity=0.171 Sum_probs=107.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCc--------C--CC--------------c
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAP--------D--MH--------------K 212 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~--------~--~~--------------~ 212 (348)
++.+|||||||+|.++..++.....+|+++|+|+.|++.|++++........ . .+ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 5679999999999965544433344799999999999999987654210000 0 00 0
Q ss_pred ceeEEEcCCCC-CCC-----CCCceeEEeechhhhcCChh--hHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCC-C
Q 018970 213 ATNFFCVPLQD-FTP-----ETGRYDVIWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKED-R 283 (348)
Q Consensus 213 ~i~~~~~d~~~-~~~-----~~~~fD~Ii~~~~l~~~~~~--d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~-~ 283 (348)
.+.+..+|+.+ +++ ++++||+|+++.+++|+..+ ++..+++++.++|||||.|++........+...... .
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~ 230 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLT 230 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeee
Confidence 14566778877 442 24679999999999996543 789999999999999999999864332222111111 1
Q ss_pred ceecCHHHHHHHHHhcCCeEEEEeecC
Q 018970 284 SITRSDFYFKELFSRCGLHIYKSKDQK 310 (348)
Q Consensus 284 ~~~~s~~~l~~l~~~aGf~~v~~~~~~ 310 (348)
...++.+++.++|+++||+++......
T Consensus 231 ~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 231 VVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 223689999999999999998866543
No 54
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.75 E-value=6.8e-18 Score=143.05 Aligned_cols=135 Identities=17% Similarity=0.111 Sum_probs=110.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||+|||+|.++..++..+. .|+++|+|+.+++.++++. .++++...| .+.++++||+|
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----------~~v~~~~~d---~~~~~~~~D~v 79 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKF-----------DSVITLSDP---KEIPDNSVDFI 79 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHC-----------TTSEEESSG---GGSCTTCEEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhC-----------CCcEEEeCC---CCCCCCceEEE
Confidence 45678999999999999999987775 7999999999999999882 358888888 44556799999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeecC
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQK 310 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~ 310 (348)
++..+++|++ +...+++++.++|||||.+++.+......... ......++.+++.++++ ||++++.....
T Consensus 80 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~ 149 (170)
T 3i9f_A 80 LFANSFHDMD--DKQHVISEVKRILKDDGRVIIIDWRKENTGIG--PPLSIRMDEKDYMGWFS--NFVVEKRFNPT 149 (170)
T ss_dssp EEESCSTTCS--CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS--SCGGGCCCHHHHHHHTT--TEEEEEEECSS
T ss_pred EEccchhccc--CHHHHHHHHHHhcCCCCEEEEEEcCccccccC--chHhhhcCHHHHHHHHh--CcEEEEccCCC
Confidence 9999999998 78899999999999999999987554322111 11223368999999999 99999877654
No 55
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.75 E-value=3.9e-18 Score=157.11 Aligned_cols=144 Identities=16% Similarity=0.184 Sum_probs=113.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
..++.+|||||||+|.++..++...+ .+|+++|+|+.+++.|++++... ..++.+.+.|+.+++.+ ++||
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~~v~~~~~d~~~~~~~-~~fD 91 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-------PYDSEFLEGDATEIELN-DKYD 91 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-------SSEEEEEESCTTTCCCS-SCEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEEcchhhcCcC-CCee
Confidence 56778999999999999999987754 37999999999999999987653 34799999999998875 7999
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccC---CCceecCC---------------------CCceecC
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR---SGFVLDKE---------------------DRSITRS 288 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~---~~~~~d~~---------------------~~~~~~s 288 (348)
+|++..+++|++ +...+++++.++|||||++++.+.... ..+..+.. ......+
T Consensus 92 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (284)
T 3gu3_A 92 IAICHAFLLHMT--TPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNI 169 (284)
T ss_dssp EEEEESCGGGCS--SHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTG
T ss_pred EEEECChhhcCC--CHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccH
Confidence 999999999998 778999999999999999999875510 00111100 0011123
Q ss_pred HHHHHHHHHhcCCeEEEEee
Q 018970 289 DFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 289 ~~~l~~l~~~aGf~~v~~~~ 308 (348)
...+.++++++||+.+....
T Consensus 170 ~~~l~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 170 GMKIPIYLSELGVKNIECRV 189 (284)
T ss_dssp GGTHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 45689999999999887643
No 56
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.75 E-value=1.2e-18 Score=158.48 Aligned_cols=98 Identities=20% Similarity=0.304 Sum_probs=85.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
..+.+|||||||+|.++..|+..+. +|+++|+|+.|++.|++ ..++.+.++|++++++++++||+|+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~------------~~~v~~~~~~~e~~~~~~~sfD~v~ 104 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALR------------HPRVTYAVAPAEDTGLPPASVDVAI 104 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCC------------CTTEEEEECCTTCCCCCSSCEEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhh------------cCCceeehhhhhhhcccCCcccEEE
Confidence 3456899999999999999987665 69999999999987642 2469999999999998889999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+..++||++ ...+++++.|+|||||.|++..
T Consensus 105 ~~~~~h~~~---~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 105 AAQAMHWFD---LDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp ECSCCTTCC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeeehhHhh---HHHHHHHHHHHcCCCCEEEEEE
Confidence 999998876 4589999999999999998864
No 57
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.75 E-value=7.9e-18 Score=147.70 Aligned_cols=126 Identities=19% Similarity=0.208 Sum_probs=102.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
++.+|||||||+|.++..+ +..+|+++|+|+.|++.++++. .++.+.+.|+.+++.++++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----------PEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----------TTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcccccCCCCCCcEEEEEE
Confidence 6789999999999999877 4436999999999999999886 2478899999998877789999999
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce-----e-cC----CCCceecCHHHHHHHHHhcC
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV-----L-DK----EDRSITRSDFYFKELFSRCG 300 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~-----~-d~----~~~~~~~s~~~l~~l~~~aG 300 (348)
..+++|++ ++..+++++.++|||||.+++.......... . .. ..+...++.+++.++++ |
T Consensus 102 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 102 FTTLEFVE--DVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp ESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred cChhhhcC--CHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 99999998 7889999999999999999998755433210 0 00 11223369999999999 7
No 58
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=1.1e-17 Score=153.55 Aligned_cols=139 Identities=15% Similarity=0.142 Sum_probs=111.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+. .|+++|+|+.|++.++++. .++.+...|+.++++ +++||+|
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~-~~~fD~v 121 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY-----------PHLHFDVADARNFRV-DKPLDAV 121 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----------TTSCEEECCTTTCCC-SSCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC-----------CCCEEEECChhhCCc-CCCcCEE
Confidence 35677999999999999999987444 6999999999999999875 247899999999886 4799999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-e--------------e-cCCCCceecCHHHHHHHHHh
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-V--------------L-DKEDRSITRSDFYFKELFSR 298 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-~--------------~-d~~~~~~~~s~~~l~~l~~~ 298 (348)
++..+++|++ ++..+++++.++|||||++++......... . . ........++.+++.+++++
T Consensus 122 ~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 199 (279)
T 3ccf_A 122 FSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEK 199 (279)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHH
T ss_pred EEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHH
Confidence 9999999998 788999999999999999999765432210 0 0 00111123588999999999
Q ss_pred cCCeEEEEee
Q 018970 299 CGLHIYKSKD 308 (348)
Q Consensus 299 aGf~~v~~~~ 308 (348)
+||+++....
T Consensus 200 aGf~~~~~~~ 209 (279)
T 3ccf_A 200 QGFDVTYAAL 209 (279)
T ss_dssp HTEEEEEEEE
T ss_pred cCCEEEEEEE
Confidence 9999887553
No 59
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.75 E-value=7.2e-18 Score=150.84 Aligned_cols=144 Identities=17% Similarity=0.233 Sum_probs=111.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++.. ..|+++|+|+.|++.|++++... ..++++.+.|+.+++.+ ++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~-~~fD~v~ 101 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMET-------NRHVDFWVQDMRELELP-EPVDAIT 101 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCGGGCCCS-SCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhc-------CCceEEEEcChhhcCCC-CCcCEEE
Confidence 34579999999999999998866 56999999999999999987542 24688999999888765 7899999
Q ss_pred ech-hhhcCC-hhhHHHHHHHHHHcCCCCcEEEEEecccC--------CC---------ce----ecC------------
Q 018970 236 VQW-CIGHLT-DDDFVSFFKRAKVGLKPGGFFVLKENIAR--------SG---------FV----LDK------------ 280 (348)
Q Consensus 236 ~~~-~l~~~~-~~d~~~~l~~~~~~LkpgG~lii~~~~~~--------~~---------~~----~d~------------ 280 (348)
+.. +++|+. .++...+++++.++|||||.+++...... .. +. .+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (243)
T 3d2l_A 102 ILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFF 181 (243)
T ss_dssp ECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEE
T ss_pred EeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEE
Confidence 986 999994 36788999999999999999998431110 00 00 000
Q ss_pred ---CCC----------ceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 281 ---EDR----------SITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 281 ---~~~----------~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
... ...++.+++.++++++||+++.....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 223 (243)
T 3d2l_A 182 IEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGD 223 (243)
T ss_dssp EECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEET
T ss_pred EEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecC
Confidence 000 01269999999999999999987654
No 60
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.75 E-value=6.4e-18 Score=156.28 Aligned_cols=160 Identities=14% Similarity=0.192 Sum_probs=108.7
Q ss_pred HHHHHHhhhcCCcc-CCCCCcEEEEeccccHHHHHH----HHhCCC-c--EEEEcCCHHHHHHHHHHhCCCCCCCcCCCc
Q 018970 141 FLQMLLSDRFPNAR-NNQHLVALDCGSGIGRITKNL----LIRYFN-E--VDLLEPVSHFLDAARESLAPENHMAPDMHK 212 (348)
Q Consensus 141 ~l~~~l~~~l~~~~-~~~~~~VLDvGcG~G~~~~~l----a~~~~~-~--v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~ 212 (348)
++...+...+.... ..++.+|||||||+|.++..+ +.+++. . ++++|+|+.|++.|++++...+. ..
T Consensus 35 ~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~-----~~ 109 (292)
T 2aot_A 35 FMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN-----LE 109 (292)
T ss_dssp HHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS-----CT
T ss_pred HHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC-----CC
Confidence 34444444333222 356679999999999876543 333333 2 39999999999999998753210 12
Q ss_pred ce--eEEEcCCCCCC------CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc------e-
Q 018970 213 AT--NFFCVPLQDFT------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF------V- 277 (348)
Q Consensus 213 ~i--~~~~~d~~~~~------~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~------~- 277 (348)
++ .+...++++++ +++++||+|++..++||++ |+..++++++++|||||++++........+ .
T Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~ 187 (292)
T 2aot_A 110 NVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYG 187 (292)
T ss_dssp TEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHG
T ss_pred cceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHH
Confidence 33 34455554432 3457899999999999999 788999999999999999999864332211 0
Q ss_pred --ecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 278 --LDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 278 --~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
.........++.+++.++|+++||+++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 219 (292)
T 2aot_A 188 SRFPQDDLCQYITSDDLTQMLDNLGLKYECYD 219 (292)
T ss_dssp GGSCCCTTCCCCCHHHHHHHHHHHTCCEEEEE
T ss_pred HhccCCCcccCCCHHHHHHHHHHCCCceEEEE
Confidence 011112233688999999999999987643
No 61
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.75 E-value=2.2e-18 Score=165.72 Aligned_cols=149 Identities=15% Similarity=0.114 Sum_probs=114.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-C-CcEEEEcCCHHHHHHHHHHhCCC-----CCCCcCCCcceeEEEcCCCCC---
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPE-----NHMAPDMHKATNFFCVPLQDF--- 224 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~-~~v~~vD~S~~~l~~a~~~~~~~-----~~~~~~~~~~i~~~~~d~~~~--- 224 (348)
..++.+|||||||+|.++..++... . ..|+++|+|+.|++.|++++... |. ....++.|...|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~---~~~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGS---PSRSNVRFLKGFIENLATA 157 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSS---TTCCCEEEEESCTTCGGGC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccc---cCCCceEEEEccHHHhhhc
Confidence 4567899999999999999998764 2 27999999999999999876321 10 0024799999999987
Q ss_pred ---CCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce---e-----cCCCCceecCHHHHH
Q 018970 225 ---TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV---L-----DKEDRSITRSDFYFK 293 (348)
Q Consensus 225 ---~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~---~-----d~~~~~~~~s~~~l~ 293 (348)
++++++||+|+++.+++|++ ++..+++++.++|||||+|++.+........ . -.......++.+++.
T Consensus 158 ~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (383)
T 4fsd_A 158 EPEGVPDSSVDIVISNCVCNLST--NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFR 235 (383)
T ss_dssp BSCCCCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHH
T ss_pred ccCCCCCCCEEEEEEccchhcCC--CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHH
Confidence 77778999999999999998 7889999999999999999998754332210 0 000111225678999
Q ss_pred HHHHhcCCeEEEEee
Q 018970 294 ELFSRCGLHIYKSKD 308 (348)
Q Consensus 294 ~l~~~aGf~~v~~~~ 308 (348)
++++++||++++...
T Consensus 236 ~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 236 RLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHTTCCCEEEEE
T ss_pred HHHHHCCCceEEEEe
Confidence 999999998776443
No 62
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=3e-17 Score=148.26 Aligned_cols=137 Identities=18% Similarity=0.201 Sum_probs=108.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||||||+|.++..++...+ ..|+++|+|+.|++.++++. .++.+...|+.+++ ++++||+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~-~~~~fD~ 98 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----------PNTNFGKADLATWK-PAQKADL 98 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----------TTSEEEECCTTTCC-CSSCEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----------CCcEEEECChhhcC-ccCCcCE
Confidence 46678999999999999999988742 36999999999999999873 35889999999987 5689999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCC--------------ce--ecC--CCCceecCHHHHHHH
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG--------------FV--LDK--EDRSITRSDFYFKEL 295 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~--------------~~--~d~--~~~~~~~s~~~l~~l 295 (348)
|+++.+++|++ ++..+++++.++|||||.+++........ +. ... ......++.+++.++
T Consensus 99 v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (259)
T 2p35_A 99 LYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNA 176 (259)
T ss_dssp EEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHH
T ss_pred EEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHH
Confidence 99999999998 78899999999999999999986432111 00 000 011223688999999
Q ss_pred HHhcCCeEEE
Q 018970 296 FSRCGLHIYK 305 (348)
Q Consensus 296 ~~~aGf~~v~ 305 (348)
|+++||++..
T Consensus 177 l~~aGf~v~~ 186 (259)
T 2p35_A 177 LSPKSSRVDV 186 (259)
T ss_dssp HGGGEEEEEE
T ss_pred HHhcCCceEE
Confidence 9999997543
No 63
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.75 E-value=2.2e-18 Score=159.67 Aligned_cols=153 Identities=19% Similarity=0.220 Sum_probs=110.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCC-----------------------------
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHM----------------------------- 206 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~----------------------------- 206 (348)
++.+|||||||+|.++..++.... ..|+|+|+|+.|++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 567999999999999999998753 48999999999999999987653321
Q ss_pred -----------------------CcCCCcceeEEEcCCCCCC-----CCCCceeEEeechhhhcC----ChhhHHHHHHH
Q 018970 207 -----------------------APDMHKATNFFCVPLQDFT-----PETGRYDVIWVQWCIGHL----TDDDFVSFFKR 254 (348)
Q Consensus 207 -----------------------~~~~~~~i~~~~~d~~~~~-----~~~~~fD~Ii~~~~l~~~----~~~d~~~~l~~ 254 (348)
......+++|.++|+.... ...++||+|++..+++|+ .++++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0111257999999997654 345899999999999887 55678999999
Q ss_pred HHHcCCCCcEEEEEecccCCC----c---eecCCCCceecCHHHHHHHHHh--cCCeEEEEeec
Q 018970 255 AKVGLKPGGFFVLKENIARSG----F---VLDKEDRSITRSDFYFKELFSR--CGLHIYKSKDQ 309 (348)
Q Consensus 255 ~~~~LkpgG~lii~~~~~~~~----~---~~d~~~~~~~~s~~~l~~l~~~--aGf~~v~~~~~ 309 (348)
++++|+|||+|++........ . ........+.+..+++.++|.+ +||+.++....
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 999999999999964321100 0 0000011122456789999998 99988886654
No 64
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=2e-17 Score=146.41 Aligned_cols=107 Identities=21% Similarity=0.249 Sum_probs=92.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+. +|+++|+|+.+++.|++++... ..++++.+.|+.+++.++++||+|+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~D~v~ 108 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSR-------ESNVEFIVGDARKLSFEDKTFDYVI 108 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc-------CCCceEEECchhcCCCCCCcEEEEE
Confidence 3467999999999999999987776 6999999999999999887542 2468999999998876668999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
++.++++....+...+++++.++|||||.+++.+.
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 109 FIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp EESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 99996666666888999999999999999998753
No 65
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.75 E-value=3.3e-19 Score=160.23 Aligned_cols=141 Identities=15% Similarity=0.064 Sum_probs=102.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC--CCCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~ 233 (348)
.++.+|||||||+|..+..+++..+.+|+++|+|+.|++.|+++.... ..++.+...|++++ ..++++||.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhC-------CCceEEEeehHHhhcccccccCCce
Confidence 567899999999999999988766668999999999999999988764 34678888887654 245678999
Q ss_pred Eee-----chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 234 IWV-----QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 234 Ii~-----~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
|+. ...++|+. +...+++++.|+|||||+|++.+....................+.+...|.++||++..
T Consensus 132 i~~D~~~~~~~~~~~~--~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 132 ILYDTYPLSEETWHTH--QFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp EEECCCCCBGGGTTTH--HHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGG
T ss_pred EEEeeeecccchhhhc--chhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEE
Confidence 874 56677777 78899999999999999998754221111111111111112334566778889998543
No 66
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.74 E-value=1.6e-17 Score=146.90 Aligned_cols=134 Identities=18% Similarity=0.150 Sum_probs=108.3
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeec
Q 018970 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~ 237 (348)
+.+|||||||+|.++..++.. +++|+|+.|++.++++ ++.+.+.|+.+++.++++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-------------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-------------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-------------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-------------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 679999999999999987643 9999999999999875 2678889998888777899999999
Q ss_pred hhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc---e------ecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF---V------LDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~---~------~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
.+++|++ ++..+++++.++|+|||.+++......... . .........++.+++.++++++||+++....
T Consensus 110 ~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 110 TTICFVD--DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp SCGGGSS--CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred chHhhcc--CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 9999998 778999999999999999999875432221 0 0001122336899999999999999998766
Q ss_pred cCC
Q 018970 309 QKG 311 (348)
Q Consensus 309 ~~~ 311 (348)
...
T Consensus 188 ~~~ 190 (219)
T 1vlm_A 188 TLF 190 (219)
T ss_dssp ECC
T ss_pred ccC
Confidence 543
No 67
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.74 E-value=2.6e-17 Score=144.94 Aligned_cols=135 Identities=13% Similarity=0.157 Sum_probs=105.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+. .|+++|+|+.|++.|++++.. ..++++.+.|+.+++ ++++||+|
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~-~~~~fD~v 118 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKR--------WSHISWAATDILQFS-TAELFDLI 118 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTT--------CSSEEEEECCTTTCC-CSCCEEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhccc--------CCCeEEEEcchhhCC-CCCCccEE
Confidence 45678999999999999999987765 699999999999999999876 247999999999988 45899999
Q ss_pred eechhhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 235 WVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 235 i~~~~l~~~~~-~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
+++.+++|+++ +++..+++++.++|||||.+++..........+. .....+.+..++.+. +..++
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~e 184 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWG-----HVAGAETVITILTEA-LTEVE 184 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTT-----CSCCHHHHHHHHHHH-SEEEE
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhh-----hhhhHHHHHHHHHhh-ccceE
Confidence 99999999995 5567899999999999999999764322111011 123455666666553 44444
No 68
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=3.6e-18 Score=155.37 Aligned_cols=138 Identities=16% Similarity=0.084 Sum_probs=107.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+. +|+++|+|+.|++.++++. ++++...|+.+++.++++||+|
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------------~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP------------QVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT------------TEEEECCCTTSCCSCTTCBSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc------------CCEEEECchhhCCCCCCCEeEE
Confidence 45778999999999999999987554 6999999999998765432 6899999999988877899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc---eecCC------CCceecCHHHHHHHHHhcCCeEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF---VLDKE------DRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~---~~d~~------~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
++..+++|++ ++..+++++.++|| ||++++.+....... ..... ......+.+.+. +++++||..+.
T Consensus 99 ~~~~~l~~~~--~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~ 174 (261)
T 3ege_A 99 ISILAIHHFS--HLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVE 174 (261)
T ss_dssp EEESCGGGCS--SHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEE
T ss_pred EEcchHhhcc--CHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCcee
Confidence 9999999997 88899999999999 998888764322111 00000 011224567788 99999999887
Q ss_pred Eeec
Q 018970 306 SKDQ 309 (348)
Q Consensus 306 ~~~~ 309 (348)
....
T Consensus 175 ~~~~ 178 (261)
T 3ege_A 175 AIPF 178 (261)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6543
No 69
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.74 E-value=3.1e-17 Score=154.38 Aligned_cols=148 Identities=16% Similarity=0.105 Sum_probs=117.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..+..+|||||||+|.++..+++..+. .++++|+ +.+++.|++++...++ ..+++|...|+.+ +.+ .+||+
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~p-~~~D~ 238 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL-----SGRAQVVVGSFFD-PLP-AGAGG 238 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCC-CSCSE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc-----CcCeEEecCCCCC-CCC-CCCcE
Confidence 455679999999999999999987765 7999999 9999999998765433 4579999999973 333 38999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCC---ceecC----CCCceecCHHHHHHHHHhcCCeEEEE
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG---FVLDK----EDRSITRSDFYFKELFSRCGLHIYKS 306 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~---~~~d~----~~~~~~~s~~~l~~l~~~aGf~~v~~ 306 (348)
|++.+++||+++++...++++++++|+|||+|++.+...... ...+. ......++.++|.++++++||++++.
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 318 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAA 318 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 999999999998778999999999999999999998765432 00000 01122368999999999999999987
Q ss_pred eecC
Q 018970 307 KDQK 310 (348)
Q Consensus 307 ~~~~ 310 (348)
....
T Consensus 319 ~~~~ 322 (332)
T 3i53_A 319 HPIS 322 (332)
T ss_dssp EECS
T ss_pred EECC
Confidence 7543
No 70
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.73 E-value=4.4e-17 Score=148.73 Aligned_cols=148 Identities=9% Similarity=-0.066 Sum_probs=113.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-C-CcEEEEcCCHH------HHHHHHHHhCCCCCCCcCCCcceeEEEcC---CCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSH------FLDAARESLAPENHMAPDMHKATNFFCVP---LQD 223 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~-~~v~~vD~S~~------~l~~a~~~~~~~~~~~~~~~~~i~~~~~d---~~~ 223 (348)
+.++.+|||||||+|.++..++..+ + ..|+++|+|+. |++.|++++...++ ..++++...| ...
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL-----GDRLTVHFNTNLSDDL 115 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT-----GGGEEEECSCCTTTCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC-----CCceEEEECChhhhcc
Confidence 5677899999999999999999874 4 37999999997 99999998866433 3578999998 334
Q ss_pred CCCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc----------e-------e--c-CCCC
Q 018970 224 FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF----------V-------L--D-KEDR 283 (348)
Q Consensus 224 ~~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~----------~-------~--d-~~~~ 283 (348)
+++++++||+|++..+++|++ +...+++.+.++++|||.+++.+....... . . . ....
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~~--~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYFA--SANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANI 193 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGSS--CHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSC
T ss_pred CCCCCCCEEEEEEccchhhCC--CHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccc
Confidence 444568999999999999999 455688888888888999999875432210 0 0 0 1111
Q ss_pred ceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 284 SITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 284 ~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
...++.+.+.++++++||+++.....
T Consensus 194 ~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 194 RTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred cccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 23468999999999999999886654
No 71
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.73 E-value=2.3e-17 Score=148.73 Aligned_cols=117 Identities=21% Similarity=0.317 Sum_probs=95.1
Q ss_pred HHHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEE
Q 018970 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (348)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~ 218 (348)
..++..++.... ..++.+|||+|||+|.++..++..+. .|+++|+|+.|++.|++++... +.++.+.+
T Consensus 27 ~~~~~~~~~~~~----~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~~ 94 (252)
T 1wzn_A 27 IDFVEEIFKEDA----KREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKER-------NLKIEFLQ 94 (252)
T ss_dssp HHHHHHHHHHTC----SSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCCEEEE
T ss_pred HHHHHHHHHHhc----ccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhc-------CCceEEEE
Confidence 355555554321 34567999999999999999998766 5999999999999999987543 23688999
Q ss_pred cCCCCCCCCCCceeEEeec-hhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 219 VPLQDFTPETGRYDVIWVQ-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 219 ~d~~~~~~~~~~fD~Ii~~-~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
.|+.+++.+ ++||+|++. ..++|++.++...+++++.++|||||.+++.
T Consensus 95 ~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 95 GDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 999887765 689999986 4667777678899999999999999999875
No 72
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=3.2e-18 Score=153.35 Aligned_cols=141 Identities=14% Similarity=0.090 Sum_probs=101.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC--CCCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~ 233 (348)
.++.+|||||||+|.++..++..+...|+++|+|+.|++.|+++.... ..++.+.++|+.++ ++++++||+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhc-------CCCeEEEecCHHHhhcccCCCceEE
Confidence 467899999999999999997655557999999999999999987653 34689999999887 666789999
Q ss_pred Eee-chhh--hcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeE
Q 018970 234 IWV-QWCI--GHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHI 303 (348)
Q Consensus 234 Ii~-~~~l--~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~ 303 (348)
|++ .+.+ +.....+...+++++.++|||||+|++.+....................+.....+.++||..
T Consensus 132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred EEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 999 5543 232334566889999999999999998753311111101111111122344567788999984
No 73
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.73 E-value=2.1e-17 Score=155.37 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=118.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.++.+|||||||+|.++..++...+. +++++|+| .+++.|++++...++ ..++++...|+.+.+.+ +.||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV-----ASRYHTIAGSAFEVDYG-NDYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC-----GGGEEEEESCTTTSCCC-SCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC-----CcceEEEecccccCCCC-CCCcEE
Confidence 56789999999999999999988644 79999999 999999998754332 34699999999887655 359999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-------eecC-----CCCceecCHHHHHHHHHhcCCe
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-------VLDK-----EDRSITRSDFYFKELFSRCGLH 302 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-------~~d~-----~~~~~~~s~~~l~~l~~~aGf~ 302 (348)
++.+++||+++++...+++++.++|+|||.+++.+....... .++. ......++.++|.++++++||+
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~ 316 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFS 316 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCS
T ss_pred EEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCC
Confidence 999999999887889999999999999999999886543211 0000 0123347899999999999999
Q ss_pred EEEEeecC
Q 018970 303 IYKSKDQK 310 (348)
Q Consensus 303 ~v~~~~~~ 310 (348)
+++.....
T Consensus 317 ~~~~~~~~ 324 (335)
T 2r3s_A 317 HSQLHSLP 324 (335)
T ss_dssp EEEEECCT
T ss_pred eeeEEECC
Confidence 99876543
No 74
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.73 E-value=1.1e-16 Score=140.19 Aligned_cols=107 Identities=16% Similarity=0.190 Sum_probs=94.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..++..|+++|+|+.+++.++++... ..++.+...|+.+++.++++||+|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--------~~~i~~~~~d~~~~~~~~~~fD~v~ 112 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--------VPQLRWETMDVRKLDFPSASFDVVL 112 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--------CTTCEEEECCTTSCCSCSSCEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--------CCCcEEEEcchhcCCCCCCcccEEE
Confidence 46779999999999999999988775799999999999999998764 2468999999998877778999999
Q ss_pred echhhhcCC-------------hhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 236 VQWCIGHLT-------------DDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 236 ~~~~l~~~~-------------~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+..+++++. .++...+++++.++|||||.+++.+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 999998775 35678999999999999999999874
No 75
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.73 E-value=4.9e-18 Score=156.62 Aligned_cols=111 Identities=17% Similarity=0.201 Sum_probs=91.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---CCCCcee
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETGRYD 232 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD 232 (348)
.++.+|||||||+|.++..++..+. +|+++|+|+.|++.|+++....+.. ....++.+...|+.+++ +.+++||
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKE--PAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTS--HHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccc--cccceeeEeecChhhCccccccCCCeE
Confidence 4567999999999999999998876 6999999999999998875221110 00245778888888766 5668999
Q ss_pred EEeec-hhhhcCCh-----hhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWVQ-WCIGHLTD-----DDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~~-~~l~~~~~-----~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|++. .+++|+++ ++...++++++++|||||+|++..
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 99998 89999995 558999999999999999999864
No 76
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.72 E-value=8.5e-17 Score=153.82 Aligned_cols=146 Identities=22% Similarity=0.287 Sum_probs=117.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..+..+|||||||+|.++..+++.++. .++++|+ +.+++.|++++...++ ..+++|...|+.+ +.+ ..||+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l-----~~~v~~~~~d~~~-~~p-~~~D~ 271 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL-----ADRCEILPGDFFE-TIP-DGADV 271 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTT-CCC-SSCSE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc-----CCceEEeccCCCC-CCC-CCceE
Confidence 456789999999999999999988665 7999999 9999999998765433 4579999999983 333 38999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-----eecC----CCCceecCHHHHHHHHHhcCCeEE
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-----VLDK----EDRSITRSDFYFKELFSRCGLHIY 304 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-----~~d~----~~~~~~~s~~~l~~l~~~aGf~~v 304 (348)
|++.+++|++++++...++++++++|+|||+|++.+....... ..+. ......++.++|.++++++||+++
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 351 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVE 351 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEE
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEE
Confidence 9999999999977777999999999999999999886644321 0000 011223789999999999999999
Q ss_pred EEee
Q 018970 305 KSKD 308 (348)
Q Consensus 305 ~~~~ 308 (348)
+...
T Consensus 352 ~~~~ 355 (369)
T 3gwz_A 352 RSLP 355 (369)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9865
No 77
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.72 E-value=5.3e-17 Score=143.55 Aligned_cols=139 Identities=15% Similarity=0.159 Sum_probs=109.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC--CCCCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD--FTPETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~~~~~fD~ 233 (348)
.++.+|||+|||+|.++..++..+ ..|+++|+|+.+++.++++. .++...|+.+ .+.++++||+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~-------------~~~~~~d~~~~~~~~~~~~fD~ 96 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL-------------DHVVLGDIETMDMPYEEEQFDC 96 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS-------------SEEEESCTTTCCCCSCTTCEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC-------------CcEEEcchhhcCCCCCCCccCE
Confidence 466799999999999999998774 57999999999999998654 3578888876 4455679999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCC----------Cceec-----CCCCceecCHHHHHHHHHh
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS----------GFVLD-----KEDRSITRSDFYFKELFSR 298 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~----------~~~~d-----~~~~~~~~s~~~l~~l~~~ 298 (348)
|++..+++|++ +...+++++.++|+|||.+++....... .+... ...+...++.+++.+++++
T Consensus 97 v~~~~~l~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (230)
T 3cc8_A 97 VIFGDVLEHLF--DPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLK 174 (230)
T ss_dssp EEEESCGGGSS--CHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHH
T ss_pred EEECChhhhcC--CHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHH
Confidence 99999999998 6789999999999999999998644221 11110 0112233689999999999
Q ss_pred cCCeEEEEeecC
Q 018970 299 CGLHIYKSKDQK 310 (348)
Q Consensus 299 aGf~~v~~~~~~ 310 (348)
+||+++......
T Consensus 175 ~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 175 AGYSISKVDRVY 186 (230)
T ss_dssp TTEEEEEEEEEE
T ss_pred cCCeEEEEEecc
Confidence 999998876543
No 78
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.72 E-value=4e-17 Score=154.75 Aligned_cols=145 Identities=17% Similarity=0.195 Sum_probs=117.0
Q ss_pred CCC-CCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CCCCc
Q 018970 155 NNQ-HLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGR 230 (348)
Q Consensus 155 ~~~-~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~ 230 (348)
..+ +.+|||||||+|.++..+++.++. .++++|+ +.+++.+++++...++ ..++++...|+.+.+ .+ +.
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~-~~ 248 (352)
T 3mcz_A 176 VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL-----GGRVEFFEKNLLDARNFEG-GA 248 (352)
T ss_dssp GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-----GGGEEEEECCTTCGGGGTT-CC
T ss_pred CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC-----CCceEEEeCCcccCcccCC-CC
Confidence 344 789999999999999999988765 7999999 8899999988765433 457999999998865 33 67
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-------eecC-----CCCceecCHHHHHHHHHh
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-------VLDK-----EDRSITRSDFYFKELFSR 298 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-------~~d~-----~~~~~~~s~~~l~~l~~~ 298 (348)
||+|++.+++||+++++...++++++++|+|||.|++.+....... .++. ......++.++|.+++++
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRD 328 (352)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHH
T ss_pred ccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHH
Confidence 9999999999999987889999999999999999999886543221 0010 112334789999999999
Q ss_pred cCCeEEEE
Q 018970 299 CGLHIYKS 306 (348)
Q Consensus 299 aGf~~v~~ 306 (348)
+||++++.
T Consensus 329 aGf~~~~~ 336 (352)
T 3mcz_A 329 AGLAVGER 336 (352)
T ss_dssp TTCEEEEE
T ss_pred CCCceeee
Confidence 99999984
No 79
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.71 E-value=1.6e-16 Score=151.13 Aligned_cols=147 Identities=14% Similarity=0.134 Sum_probs=116.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||||||+|.++..++...+. +++++|+ +.+++.|++++...++ ..++++...|+.+.+.+. +|+
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~--~D~ 259 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV-----ADRMRGIAVDIYKESYPE--ADA 259 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-----TTTEEEEECCTTTSCCCC--CSE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC-----CCCEEEEeCccccCCCCC--CCE
Confidence 456789999999999999999988654 7999999 9999999998765433 345999999998876553 499
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc--e----------ecCC-CCceecCHHHHHHHHHhcC
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF--V----------LDKE-DRSITRSDFYFKELFSRCG 300 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~--~----------~d~~-~~~~~~s~~~l~~l~~~aG 300 (348)
|++..++||+++++...+++++.++|||||.+++.+....... . .... .....++.++|.++++++|
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aG 339 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLG 339 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHT
T ss_pred EEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCC
Confidence 9999999999977799999999999999999999875543210 0 0000 0011278899999999999
Q ss_pred CeEEEEeec
Q 018970 301 LHIYKSKDQ 309 (348)
Q Consensus 301 f~~v~~~~~ 309 (348)
|++++....
T Consensus 340 f~~v~~~~~ 348 (359)
T 1x19_A 340 YKDVTMVRK 348 (359)
T ss_dssp CEEEEEEEE
T ss_pred CceEEEEec
Confidence 999987654
No 80
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.71 E-value=6.3e-18 Score=164.00 Aligned_cols=145 Identities=17% Similarity=0.199 Sum_probs=108.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+. .|+++|+|+.|++.|+++... .....+...+..+++.++++||+|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~~~~~~l~~~~~~fD~I 175 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIR--------VRTDFFEKATADDVRRTEGPANVI 175 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCC--------EECSCCSHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCC--------cceeeechhhHhhcccCCCCEEEE
Confidence 56778999999999999999998766 699999999999999876211 011112223333344445799999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCC-----CceecCCCCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS-----GFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~-----~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
++..+++|++ ++..++++++++|||||++++....... .+......+...++.+.+.++++++||+++.....
T Consensus 176 ~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~ 253 (416)
T 4e2x_A 176 YAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRL 253 (416)
T ss_dssp EEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEE
T ss_pred EECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEc
Confidence 9999999999 8899999999999999999997643211 11111123444579999999999999999987765
Q ss_pred C
Q 018970 310 K 310 (348)
Q Consensus 310 ~ 310 (348)
.
T Consensus 254 ~ 254 (416)
T 4e2x_A 254 P 254 (416)
T ss_dssp C
T ss_pred c
Confidence 3
No 81
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.69 E-value=3.3e-17 Score=152.53 Aligned_cols=154 Identities=10% Similarity=0.106 Sum_probs=106.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCC------CC--CCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ------DF--TPE 227 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~------~~--~~~ 227 (348)
.++.+|||||||+|..+..++..+...|+|+|+|+.|++.|+++....+.....-..+++|.+.|+. ++ +.+
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3467999999999987766666665579999999999999999865421100000012567788772 22 134
Q ss_pred CCceeEEeechhhhcC-ChhhHHHHHHHHHHcCCCCcEEEEEecccC--------------------CCc----------
Q 018970 228 TGRYDVIWVQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLKENIAR--------------------SGF---------- 276 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~-~~~d~~~~l~~~~~~LkpgG~lii~~~~~~--------------------~~~---------- 276 (348)
+++||+|+|..++||+ ..++...++++++++|||||+|++...... ..+
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 5799999999999986 334678999999999999999998753110 000
Q ss_pred --eecCC--CC---ceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 277 --VLDKE--DR---SITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 277 --~~d~~--~~---~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
.+... .. .+..+.+++.++++++||++++....
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 00011 01 12246788999999999999987543
No 82
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.68 E-value=3.9e-16 Score=149.08 Aligned_cols=148 Identities=18% Similarity=0.210 Sum_probs=114.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||||||+|.++..++..++. .++++|+ +.+++.|++++...++ ..++++...|+.+ +.+ ..||+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~ 251 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL-----ADRVTVAEGDFFK-PLP-VTADV 251 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCS-CCEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCC-cCC-CCCCE
Confidence 456789999999999999999988754 7999999 9999999998765433 3479999999876 233 34999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec--ccCCCc--e----ecC----CCCceecCHHHHHHHHHhcCC
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN--IARSGF--V----LDK----EDRSITRSDFYFKELFSRCGL 301 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~--~~~~~~--~----~d~----~~~~~~~s~~~l~~l~~~aGf 301 (348)
|++..++||+++++...+++++.++|||||++++.+. ...... . .+. ......++.++|.++++++||
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 331 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGL 331 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTE
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCC
Confidence 9999999999977677999999999999999999887 432110 0 000 001223689999999999999
Q ss_pred eEEEEeecC
Q 018970 302 HIYKSKDQK 310 (348)
Q Consensus 302 ~~v~~~~~~ 310 (348)
+++......
T Consensus 332 ~~~~~~~~~ 340 (374)
T 1qzz_A 332 ALASERTSG 340 (374)
T ss_dssp EEEEEEEEC
T ss_pred ceEEEEECC
Confidence 999877653
No 83
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.68 E-value=6.5e-16 Score=146.43 Aligned_cols=143 Identities=15% Similarity=0.172 Sum_probs=108.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||||||+|.++..+++.++. .++++|+ +.++. +++....+ ...++++...|+.+ +.+ +||+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~-----~~~~v~~~~~d~~~-~~p--~~D~ 250 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD-----VAGRWKVVEGDFLR-EVP--HADV 250 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG-----GTTSEEEEECCTTT-CCC--CCSE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC-----CCCCeEEEecCCCC-CCC--CCcE
Confidence 456789999999999999999988766 7899998 44544 32222211 24579999999962 222 8999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc------eecC----CCCceecCHHHHHHHHHhcCCeE
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF------VLDK----EDRSITRSDFYFKELFSRCGLHI 303 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~------~~d~----~~~~~~~s~~~l~~l~~~aGf~~ 303 (348)
|++..++||+++++...++++++++|||||.|++.+....... ..+. ......++.++|.++++++||++
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 330 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRL 330 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEE
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCce
Confidence 9999999999977778999999999999999999886543321 0000 12223468999999999999999
Q ss_pred EEEee
Q 018970 304 YKSKD 308 (348)
Q Consensus 304 v~~~~ 308 (348)
++...
T Consensus 331 ~~~~~ 335 (348)
T 3lst_A 331 DRVVG 335 (348)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99876
No 84
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.68 E-value=2.3e-16 Score=148.44 Aligned_cols=143 Identities=17% Similarity=0.199 Sum_probs=114.0
Q ss_pred CcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeec
Q 018970 159 LVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~ 237 (348)
.+|||||||+|.++..++...+. +++++|+ +.+++.|++++...++ ..++++...|+.+ +.+ ++||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA-----GERVSLVGGDMLQ-EVP-SNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH-----TTSEEEEESCTTT-CCC-SSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC-----CCcEEEecCCCCC-CCC-CCCCEEEEc
Confidence 79999999999999999988654 7999999 9999999988653221 2469999999977 444 679999999
Q ss_pred hhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc------eecCC----CCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF------VLDKE----DRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~------~~d~~----~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
.++||+++++...+++++.++|+|||++++.+....... .++.. .....++.++|.++++++||+++...
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEE
Confidence 999999977778999999999999999999986543211 00100 01223689999999999999999876
Q ss_pred ec
Q 018970 308 DQ 309 (348)
Q Consensus 308 ~~ 309 (348)
..
T Consensus 321 ~~ 322 (334)
T 2ip2_A 321 DL 322 (334)
T ss_dssp EE
T ss_pred EC
Confidence 54
No 85
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.67 E-value=1.2e-16 Score=145.41 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=84.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++.++. .|+++|+|+.|++.|++++... .....+...+.......+++||+|
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccEE
Confidence 56778999999999999999998766 5999999999999999998652 112222222220001113689999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+++.+++|+..++...+++++.++| |||.++++.
T Consensus 115 v~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 115 LNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred EEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 9999999999888899999999999 999999975
No 86
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.67 E-value=9.7e-16 Score=145.66 Aligned_cols=146 Identities=14% Similarity=0.215 Sum_probs=116.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
.....+|||||||+|.++..++++++. .+++.|. |.+++.|++.+...+ ..++++..+|+.+.+.+ .+|+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~------~~rv~~~~gD~~~~~~~--~~D~ 247 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE------EEQIDFQEGDFFKDPLP--EADL 247 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--------CCSEEEEESCTTTSCCC--CCSE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc------cCceeeecCccccCCCC--CceE
Confidence 445679999999999999999999887 6777886 889999999876432 35799999999765443 5899
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-------eecC----CCCceecCHHHHHHHHHhcCCe
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-------VLDK----EDRSITRSDFYFKELFSRCGLH 302 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-------~~d~----~~~~~~~s~~~l~~l~~~aGf~ 302 (348)
|++.++||+++|++...+|++++++|+|||.++|.|.+..... .+|. ......+|.++|.++++++||+
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~ 327 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFR 327 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCE
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 9999999999988889999999999999999999986643211 0111 1122337999999999999999
Q ss_pred EEEEeec
Q 018970 303 IYKSKDQ 309 (348)
Q Consensus 303 ~v~~~~~ 309 (348)
.++....
T Consensus 328 ~v~v~~~ 334 (353)
T 4a6d_A 328 DFQFKKT 334 (353)
T ss_dssp EEEEECC
T ss_pred eEEEEEc
Confidence 9987654
No 87
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.67 E-value=4e-16 Score=143.18 Aligned_cols=139 Identities=16% Similarity=0.133 Sum_probs=107.0
Q ss_pred CCCcEEEEeccc---cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-------
Q 018970 157 QHLVALDCGSGI---GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (348)
Q Consensus 157 ~~~~VLDvGcG~---G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (348)
...+|||||||+ |.++..+....+. +|+++|+|+.|++.|++++.. ..++++.++|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--------~~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK--------DPNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT--------CTTEEEEECCTTCHHHHHHSHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC--------CCCeEEEEeeCCCchhhhccch
Confidence 346899999999 9887766555443 799999999999999998854 356999999997631
Q ss_pred ----CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-------eecC-CCCceecCHHHHH
Q 018970 226 ----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-------VLDK-EDRSITRSDFYFK 293 (348)
Q Consensus 226 ----~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-------~~d~-~~~~~~~s~~~l~ 293 (348)
++..+||+|++..++||+++++...++++++++|+|||+|++.+....... .+.. ......++.+++.
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~ 228 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIE 228 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHH
T ss_pred hhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHH
Confidence 222479999999999999977799999999999999999999886542110 0110 0112237999999
Q ss_pred HHHHhcCCeEEE
Q 018970 294 ELFSRCGLHIYK 305 (348)
Q Consensus 294 ~l~~~aGf~~v~ 305 (348)
++| .||++++
T Consensus 229 ~~l--~G~~l~~ 238 (274)
T 2qe6_A 229 RQF--GDFELVE 238 (274)
T ss_dssp HTT--TTCEECT
T ss_pred HHh--CCCeEcc
Confidence 999 5999876
No 88
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.67 E-value=5.9e-16 Score=147.12 Aligned_cols=148 Identities=20% Similarity=0.236 Sum_probs=116.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||||||+|.++..++..++. .++++|+ +.+++.|++++...++ ..++++...|+.+ +.+ ..||+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~ 252 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL-----SDRVDVVEGDFFE-PLP-RKADA 252 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCS-SCEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCC-CCC-CCccE
Confidence 456789999999999999999988755 7899999 9999999998765433 3479999999876 223 35999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc-cCCCc------eecCC----CCceecCHHHHHHHHHhcCCe
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI-ARSGF------VLDKE----DRSITRSDFYFKELFSRCGLH 302 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~-~~~~~------~~d~~----~~~~~~s~~~l~~l~~~aGf~ 302 (348)
|++..++||+++++...+++++.++|||||.+++.+.. ..... ..+.. .....++.++|.++++++||+
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLV 332 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCe
Confidence 99999999999777789999999999999999999876 32110 00000 012236899999999999999
Q ss_pred EEEEeecC
Q 018970 303 IYKSKDQK 310 (348)
Q Consensus 303 ~v~~~~~~ 310 (348)
++......
T Consensus 333 ~~~~~~~~ 340 (360)
T 1tw3_A 333 VEEVRQLP 340 (360)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeCC
Confidence 99876653
No 89
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.67 E-value=8.5e-16 Score=146.83 Aligned_cols=140 Identities=17% Similarity=0.281 Sum_probs=111.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..+..+|||||||+|.++..+++.++. .++++|+ +.+++.+++ ..+++|...|+.+ +.+.+ |+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~p~~--D~ 264 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------------FSGVEHLGGDMFD-GVPKG--DA 264 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCCC--SE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------------cCCCEEEecCCCC-CCCCC--CE
Confidence 456789999999999999999988766 7999999 888876542 2469999999987 44433 99
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce----------ecC-----CCCceecCHHHHHHHHHh
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV----------LDK-----EDRSITRSDFYFKELFSR 298 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~----------~d~-----~~~~~~~s~~~l~~l~~~ 298 (348)
|++.+++||+++++...+|++++++|||||+|+|.+........ .+. ......++.++|.+++++
T Consensus 265 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~ 344 (368)
T 3reo_A 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMA 344 (368)
T ss_dssp EEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHH
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHH
Confidence 99999999999888889999999999999999999866432210 110 112334789999999999
Q ss_pred cCCeEEEEeecC
Q 018970 299 CGLHIYKSKDQK 310 (348)
Q Consensus 299 aGf~~v~~~~~~ 310 (348)
+||++++.....
T Consensus 345 AGF~~v~~~~~~ 356 (368)
T 3reo_A 345 SGFRGFKVASCA 356 (368)
T ss_dssp TTCCEEEEEEEE
T ss_pred CCCeeeEEEEeC
Confidence 999999877654
No 90
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.67 E-value=3.9e-16 Score=137.34 Aligned_cols=113 Identities=22% Similarity=0.269 Sum_probs=94.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||||||+|.++..++ ..|+++|+|+. ++.+...|+.+++.++++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------------STTEEESCTTSCSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------------CceEEEeccccCCCCCCCEeEEE
Confidence 456799999999999988763 36999999876 25678899998887778999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+..++|+ . ++..+++++.++|+|||.+++.+.... ..+.+++.++++++||+++....
T Consensus 121 ~~~~l~~-~--~~~~~l~~~~~~L~~gG~l~i~~~~~~------------~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 121 FCLSLMG-T--NIRDFLEEANRVLKPGGLLKVAEVSSR------------FEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp EESCCCS-S--CHHHHHHHHHHHEEEEEEEEEEECGGG------------CSCHHHHHHHHHHTTEEEEEEEC
T ss_pred Eehhccc-c--CHHHHHHHHHHhCCCCeEEEEEEcCCC------------CCCHHHHHHHHHHCCCEEEEEec
Confidence 9999974 4 788999999999999999999874321 12788999999999999888554
No 91
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=5.6e-16 Score=135.40 Aligned_cols=128 Identities=13% Similarity=0.066 Sum_probs=105.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+...|+++|+|+.|++.|++++...++ .++++...|+.+.. +++||+|+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~--~~~fD~i~ 130 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI------YDIALQKTSLLADV--DGKFDLIV 130 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CCCEEEESSTTTTC--CSCEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEeccccccC--CCCceEEE
Confidence 46679999999999999998876555899999999999999998765432 23889999997754 47899999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeecC
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQK 310 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~ 310 (348)
++.++++ +..+++++.++|+|||.+++.+... .+.+.+.++++++||+++......
T Consensus 131 ~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~--------------~~~~~~~~~~~~~Gf~~~~~~~~~ 186 (205)
T 3grz_A 131 ANILAEI-----LLDLIPQLDSHLNEDGQVIFSGIDY--------------LQLPKIEQALAENSFQIDLKMRAG 186 (205)
T ss_dssp EESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEEG--------------GGHHHHHHHHHHTTEEEEEEEEET
T ss_pred ECCcHHH-----HHHHHHHHHHhcCCCCEEEEEecCc--------------ccHHHHHHHHHHcCCceEEeeccC
Confidence 9988875 5689999999999999999976332 246779999999999999876544
No 92
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.67 E-value=5.3e-16 Score=148.06 Aligned_cols=140 Identities=18% Similarity=0.211 Sum_probs=111.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..+..+|||||||+|.++..++++++. .++++|+ +.+++.|++ ..+++|...|+.+ +.+.+ |+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~D~~~-~~p~~--D~ 262 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------------FPGVTHVGGDMFK-EVPSG--DT 262 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCCC--SE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------------cCCeEEEeCCcCC-CCCCC--CE
Confidence 456689999999999999999988765 7999999 888876542 2469999999987 55533 99
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc----------eecC-----CCCceecCHHHHHHHHHh
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF----------VLDK-----EDRSITRSDFYFKELFSR 298 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~----------~~d~-----~~~~~~~s~~~l~~l~~~ 298 (348)
|++.+++|++++++...+|++++++|||||+|+|.+....... ..+. ......++.++|.+++++
T Consensus 263 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~ 342 (364)
T 3p9c_A 263 ILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARG 342 (364)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHH
T ss_pred EEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHH
Confidence 9999999999988889999999999999999999986643321 0111 122234789999999999
Q ss_pred cCCeEEEEeecC
Q 018970 299 CGLHIYKSKDQK 310 (348)
Q Consensus 299 aGf~~v~~~~~~ 310 (348)
+||+.++.....
T Consensus 343 AGF~~v~~~~~~ 354 (364)
T 3p9c_A 343 AGFTGVKSTYIY 354 (364)
T ss_dssp TTCCEEEEEEEE
T ss_pred CCCceEEEEEcC
Confidence 999999877654
No 93
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.66 E-value=1.1e-15 Score=136.49 Aligned_cols=151 Identities=8% Similarity=-0.025 Sum_probs=110.9
Q ss_pred hcCCccCCCCCcEEEEeccccHHHHHHHHh-CCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC--
Q 018970 149 RFPNARNNQHLVALDCGSGIGRITKNLLIR-YFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-- 224 (348)
Q Consensus 149 ~l~~~~~~~~~~VLDvGcG~G~~~~~la~~-~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-- 224 (348)
-+.+..++++.+|||+|||+|.++..++.. ++. .|+++|+|+.|++.+++++.+ ..|+.....|..+.
T Consensus 69 gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~--------~~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 69 GLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD--------RRNIFPILGDARFPEK 140 (233)
T ss_dssp TCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT--------CTTEEEEESCTTCGGG
T ss_pred chhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh--------hcCeeEEEEeccCccc
Confidence 344456899999999999999999999876 343 799999999999999998876 35788888877653
Q ss_pred -CCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeE
Q 018970 225 -TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHI 303 (348)
Q Consensus 225 -~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~ 303 (348)
+...+.+|+|++.. .|.. +...+++++.++|||||.++++......... ..... ......+.++++||++
T Consensus 141 ~~~~~~~vDvVf~d~--~~~~--~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~-~p~~~----~~~~ev~~L~~~GF~l 211 (233)
T 4df3_A 141 YRHLVEGVDGLYADV--AQPE--QAAIVVRNARFFLRDGGYMLMAIKARSIDVT-TEPSE----VYKREIKTLMDGGLEI 211 (233)
T ss_dssp GTTTCCCEEEEEECC--CCTT--HHHHHHHHHHHHEEEEEEEEEEEECCHHHHH-TCCCH----HHHHHHHHHHHTTCCE
T ss_pred cccccceEEEEEEec--cCCh--hHHHHHHHHHHhccCCCEEEEEEecccCCCC-CChHH----HHHHHHHHHHHCCCEE
Confidence 34457899998643 3333 6778999999999999999987532211000 00011 1133456788999999
Q ss_pred EEEeecCCCCccc
Q 018970 304 YKSKDQKGLPEEL 316 (348)
Q Consensus 304 v~~~~~~~~~~~l 316 (348)
++.....+|+.+.
T Consensus 212 ~e~i~L~pf~~~H 224 (233)
T 4df3_A 212 KDVVHLDPFDRDH 224 (233)
T ss_dssp EEEEECTTTSTTE
T ss_pred EEEEccCCCCCce
Confidence 9998888887664
No 94
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.65 E-value=3e-15 Score=130.76 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=101.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
+.++.+|||+|||+|.++..++..++ ..|+++|+|+.+++.|++++...++ .++++...|+.+.....++||+
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~D~ 111 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA------RNVTLVEAFAPEGLDDLPDPDR 111 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC------TTEEEEECCTTTTCTTSCCCSE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC------CcEEEEeCChhhhhhcCCCCCE
Confidence 56778999999999999999998874 3799999999999999998765322 4689999998765444468999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCe
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLH 302 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~ 302 (348)
|++..+++ ++..+++++.++|||||.+++..... .+.+.+.++++++||.
T Consensus 112 i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~--------------~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 112 VFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL--------------DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp EEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH--------------HHHHHHHHHHHHTTCE
T ss_pred EEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc--------------ccHHHHHHHHHHCCCc
Confidence 99988775 56799999999999999999976332 2456788999999984
No 95
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.65 E-value=4.2e-16 Score=144.40 Aligned_cols=105 Identities=19% Similarity=0.251 Sum_probs=90.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC--CCcEEEEcCCHHHHHHHHHHhCCC-CCCCcCCCcceeEEEcCCCCCCCCC----
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPET---- 228 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~--~~~v~~vD~S~~~l~~a~~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~---- 228 (348)
.++.+|||||||+|.++..++... ..+|+++|+|+.|++.|++++... +. ..++++.+.|+.+++...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT-----YKNVSFKISSSDDFKFLGADSV 109 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C-----CTTEEEEECCTTCCGGGCTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC-----CCceEEEEcCHHhCCccccccc
Confidence 467899999999999999999643 448999999999999999987542 11 357999999999987665
Q ss_pred --CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 229 --GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 229 --~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
++||+|++..++||+ ++..+++++.++|||||.|++.
T Consensus 110 ~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEE
Confidence 799999999999999 5789999999999999999983
No 96
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.65 E-value=6e-15 Score=150.56 Aligned_cols=155 Identities=14% Similarity=0.104 Sum_probs=114.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
.++.+|||||||+|.++..++..+. .+|+|+|+|+.|++.|++++.........-..+++|.++|+.+++..+++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 4678999999999999999987763 37999999999999998854311000000024799999999999888789999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCC--------------------ceecCCCCceecCHHHHH
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG--------------------FVLDKEDRSITRSDFYFK 293 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~--------------------~~~d~~~~~~~~s~~~l~ 293 (348)
|++..+++|+++.....+++++.++|||| .+++........ ..+...++.+.++.+++.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEFr 878 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFN 878 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHHHHH
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcceeecHHHHH
Confidence 99999999999777778999999999999 777765332110 011223444556777776
Q ss_pred H----HHHhcCCeEEEEeecCC
Q 018970 294 E----LFSRCGLHIYKSKDQKG 311 (348)
Q Consensus 294 ~----l~~~aGf~~v~~~~~~~ 311 (348)
. +.++.||.+.....-.+
T Consensus 879 ~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 879 QWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp HHHHHHHHHTTEEEEEEEESSC
T ss_pred HHHHHHHHhcCcEEEEEccCCC
Confidence 6 77778998766554433
No 97
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.64 E-value=1.2e-15 Score=131.07 Aligned_cols=119 Identities=11% Similarity=0.031 Sum_probs=88.9
Q ss_pred HHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEc
Q 018970 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV 219 (348)
Q Consensus 140 ~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~ 219 (348)
.+...++... +.++.+|||+|||+|.++..++.. ..+|+++|+|+.|++.|++++...++ .++++.+.
T Consensus 10 ~~~~~~l~~~-----~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~ 77 (185)
T 3mti_A 10 HMSHDFLAEV-----LDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI------ENTELILD 77 (185)
T ss_dssp HHHHHHHHTT-----CCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC------CCEEEEES
T ss_pred HHHHHHHHHh-----CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeC
Confidence 4444444432 456789999999999999999877 44799999999999999998865332 46888887
Q ss_pred CCCCCC-CCCCceeEEeechhhhcC-------ChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 220 PLQDFT-PETGRYDVIWVQWCIGHL-------TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 220 d~~~~~-~~~~~fD~Ii~~~~l~~~-------~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+..++. ..+++||+|+++....+. ..++...+++++.++|||||.+++...
T Consensus 78 ~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 78 GHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp CGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 777643 235789999987322221 224567889999999999999999764
No 98
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.64 E-value=3e-15 Score=133.51 Aligned_cols=141 Identities=14% Similarity=0.082 Sum_probs=104.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC----CCCCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD----FTPETG 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~----~~~~~~ 229 (348)
+.++.+|||+|||+|.++..++.... ..|+++|+|+.|++.+++++.. ..++.+...|+.+ .+.. +
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE--------RENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT--------CTTEEEEECCTTCGGGGTTTS-C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc--------CCCeEEEECCCCCcccccccC-c
Confidence 56778999999999999999998743 4799999999999999998765 2578999999988 6655 7
Q ss_pred ceeEEeechhhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 230 RYDVIWVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~-~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+||+|+ +++++ +....+++++.++|||||.+++.-..... +..........+++. +++++||++++...
T Consensus 143 ~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~ 212 (230)
T 1fbn_A 143 KVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSI----DVTKDPKEIFKEQKE-ILEAGGFKIVDEVD 212 (230)
T ss_dssp CEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGT----CSSSCHHHHHHHHHH-HHHHHTEEEEEEEE
T ss_pred cEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCC----CCCCCHHHhhHHHHH-HHHHCCCEEEEEEc
Confidence 899999 44442 23467899999999999999997211100 000000012335676 88999999998877
Q ss_pred cCCCCc
Q 018970 309 QKGLPE 314 (348)
Q Consensus 309 ~~~~~~ 314 (348)
...+..
T Consensus 213 ~~~~~~ 218 (230)
T 1fbn_A 213 IEPFEK 218 (230)
T ss_dssp CTTTST
T ss_pred cCCCcc
Confidence 655543
No 99
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.64 E-value=2.7e-16 Score=139.83 Aligned_cols=117 Identities=13% Similarity=0.094 Sum_probs=95.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCC-CCCCCC-CCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFTPE-TGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~-~~~~~~-~~~fD~ 233 (348)
.++.+|||||||+|.++..++..+. +|+++|+|+.|++.++++. .++++.+.|+ ..++.+ +++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANA-----------PHADVYEWNGKGELPAGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHC-----------TTSEEEECCSCSSCCTTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhC-----------CCceEEEcchhhccCCcCCCCEEE
Confidence 4668999999999999999987755 6999999999999999883 3588999999 456666 689999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
|+++ . ++..+++++.++|||||.++.... ..+.+.+.++++++||.++...
T Consensus 115 v~~~------~--~~~~~l~~~~~~LkpgG~l~~~~~---------------~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 115 IVSR------R--GPTSVILRLPELAAPDAHFLYVGP---------------RLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp EEEE------S--CCSGGGGGHHHHEEEEEEEEEEES---------------SSCCTHHHHHHHHTTCEEEEEE
T ss_pred EEeC------C--CHHHHHHHHHHHcCCCcEEEEeCC---------------cCCHHHHHHHHHHCCCeEEEEE
Confidence 9987 2 456889999999999999981110 0244568999999999988754
No 100
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.63 E-value=2.5e-15 Score=127.86 Aligned_cols=122 Identities=20% Similarity=0.060 Sum_probs=99.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+ .|+++|+|+.|++. . .++++.++|+.+ +.++++||+|+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~-----~----------~~~~~~~~d~~~-~~~~~~fD~i~ 83 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES-----H----------RGGNLVRADLLC-SINQESVDVVV 83 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT-----C----------SSSCEEECSTTT-TBCGGGCSEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc-----c----------cCCeEEECChhh-hcccCCCCEEE
Confidence 345699999999999999998777 79999999999986 1 358899999987 33447999999
Q ss_pred echhhhcCChh-------hHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 236 VQWCIGHLTDD-------DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 236 ~~~~l~~~~~~-------d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
++..+++.++. +...+++++.+.| |||.+++..... ...+.+.++++++||+.+....
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------------~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------------NRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------------GCHHHHHHHHHHTTCEEEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------------CCHHHHHHHHHHCCCcEEEEEe
Confidence 99998876543 4467889999999 999999987322 3467799999999999888666
Q ss_pred cC
Q 018970 309 QK 310 (348)
Q Consensus 309 ~~ 310 (348)
..
T Consensus 149 ~~ 150 (170)
T 3q87_B 149 RK 150 (170)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 101
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=3.1e-15 Score=127.18 Aligned_cols=128 Identities=17% Similarity=0.071 Sum_probs=99.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD 232 (348)
..++.+|||+|||+|.++..++..... .|+++|+|+.+++.|++++...++ ..++ +...|..+ ++...++||
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~-~~~~d~~~~~~~~~~~~D 96 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV-----SDRI-AVQQGAPRAFDDVPDNPD 96 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC-----TTSE-EEECCTTGGGGGCCSCCS
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC-----CCCE-EEecchHhhhhccCCCCC
Confidence 567789999999999999999877533 799999999999999998876543 2356 77777744 332227899
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+|++..+++| ..+++++.++|||||.+++..... .+...+.+++++.|+++.....
T Consensus 97 ~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 152 (178)
T 3hm2_A 97 VIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVTV--------------ESEQMLWALRKQFGGTISSFAI 152 (178)
T ss_dssp EEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECSH--------------HHHHHHHHHHHHHCCEEEEEEE
T ss_pred EEEECCcccH------HHHHHHHHHhcCCCCEEEEEeecc--------------ccHHHHHHHHHHcCCeeEEEEe
Confidence 9999999987 368999999999999999886432 2345678889999998877443
No 102
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.63 E-value=3.1e-15 Score=132.89 Aligned_cols=137 Identities=20% Similarity=0.105 Sum_probs=104.1
Q ss_pred CCCCCcEEEEecc-ccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCcee
Q 018970 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG-~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD 232 (348)
..++.+|||+||| +|.++..++......|+++|+|+.+++.|++++...+ .++++.++|+..+. .++++||
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~v~~~~~d~~~~~~~~~~~fD 125 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNN-------SNVRLVKSNGGIIKGVVEGTFD 125 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTT-------CCCEEEECSSCSSTTTCCSCEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhC-------CCcEEEeCCchhhhhcccCcee
Confidence 4577899999999 9999999987744469999999999999999886542 26889999965442 3347899
Q ss_pred EEeechhhhcCChh-----------------hHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHH
Q 018970 233 VIWVQWCIGHLTDD-----------------DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKEL 295 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~-----------------d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l 295 (348)
+|+++..+++..+. .+..+++.+.++|||||.+++...... ...+.+.++
T Consensus 126 ~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------~~~~~~~~~ 192 (230)
T 3evz_A 126 VIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------------KLLNVIKER 192 (230)
T ss_dssp EEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------------HHHHHHHHH
T ss_pred EEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------------hHHHHHHHH
Confidence 99998777664421 247899999999999999998642210 234678899
Q ss_pred HHhcCCeEEEEeecCC
Q 018970 296 FSRCGLHIYKSKDQKG 311 (348)
Q Consensus 296 ~~~aGf~~v~~~~~~~ 311 (348)
+++.||.+.......+
T Consensus 193 l~~~g~~~~~~~~~~g 208 (230)
T 3evz_A 193 GIKLGYSVKDIKFKVG 208 (230)
T ss_dssp HHHTTCEEEEEEECCC
T ss_pred HHHcCCceEEEEecCC
Confidence 9999998877765443
No 103
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.63 E-value=1.2e-15 Score=142.21 Aligned_cols=154 Identities=12% Similarity=0.114 Sum_probs=111.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCC-CcCCCcceeEEEcCCCCCC----C--CC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM-APDMHKATNFFCVPLQDFT----P--ET 228 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~-~~~~~~~i~~~~~d~~~~~----~--~~ 228 (348)
.++.+|||+|||+|.++..++......|+++|+|+.|++.|+++....+.. ......++.+.+.|+.+++ + ++
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 356799999999999999998765558999999999999999876431000 0000236899999998875 3 23
Q ss_pred CceeEEeechhhhcC-C-hhhHHHHHHHHHHcCCCCcEEEEEecccC---------------CC-c--eecC--------
Q 018970 229 GRYDVIWVQWCIGHL-T-DDDFVSFFKRAKVGLKPGGFFVLKENIAR---------------SG-F--VLDK-------- 280 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~-~-~~d~~~~l~~~~~~LkpgG~lii~~~~~~---------------~~-~--~~d~-------- 280 (348)
++||+|+++.++||+ . .+++..+++++.++|||||.+++...... .. + .+..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 589999999999998 3 35678999999999999999999753210 00 0 0100
Q ss_pred -----------CCCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 281 -----------EDRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 281 -----------~~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
....+..+.+.+.+++++.||+++.....
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCH
Confidence 00112256788999999999999986643
No 104
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.63 E-value=1.6e-15 Score=136.17 Aligned_cols=129 Identities=15% Similarity=0.142 Sum_probs=100.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC---CCce
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRY 231 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~f 231 (348)
.++.+|||||||+|.++..++..... .|+++|+|+.|++.|++++...++ .++++.++|+.+++.. .++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL------ENTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEESCHHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEeccHHHhcccccccCCc
Confidence 45679999999999999998864433 799999999999999998765432 3589999998876642 4789
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
|+|++..+ . ++..+++.+.++|||||.+++..... .......+.+.++++||.++....
T Consensus 143 D~V~~~~~----~--~~~~~l~~~~~~LkpgG~l~~~~g~~------------~~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 143 DIVTARAV----A--RLSVLSELCLPLVKKNGLFVALKAAS------------AEEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp EEEEEECC----S--CHHHHHHHHGGGEEEEEEEEEEECC-------------CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cEEEEecc----C--CHHHHHHHHHHhcCCCCEEEEEeCCC------------chHHHHHHHHHHHHcCCeEeEEEE
Confidence 99998662 3 67899999999999999998864211 001234577889999999887654
No 105
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.63 E-value=3.6e-15 Score=130.75 Aligned_cols=127 Identities=12% Similarity=0.115 Sum_probs=101.2
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||+|||+|.++..++.. ...|+++|+|+.|++.|++++...++ ..++++...|+.+.......||+|
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~~~~~~~~D~v 126 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGL-----SPRMRAVQGTAPAALADLPLPEAV 126 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCTTGGGTTSCCCSEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC-----CCCEEEEeCchhhhcccCCCCCEE
Confidence 567789999999999999999977 44799999999999999998765443 236899999998843333579999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
++...+ +.. +++++.++|||||.+++..... -+...+.+++++.|+++.....
T Consensus 127 ~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~~--------------~~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 127 FIGGGG------SQA-LYDRLWEWLAPGTRIVANAVTL--------------ESETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp EECSCC------CHH-HHHHHHHHSCTTCEEEEEECSH--------------HHHHHHHHHHHHHCSEEEEEEE
T ss_pred EECCcc------cHH-HHHHHHHhcCCCcEEEEEecCc--------------ccHHHHHHHHHhCCCcEEEEEe
Confidence 987643 345 9999999999999999976322 2345678889999999887543
No 106
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.62 E-value=9.8e-16 Score=135.12 Aligned_cols=149 Identities=13% Similarity=0.134 Sum_probs=99.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||||||+|.++..++..++. +|+++|+|+.|++.+.+.+..... .....++.+.++|+.+++..++. |.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~--~~~~~~v~~~~~d~~~l~~~~~~-d~ 101 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPA--KGGLPNLLYLWATAERLPPLSGV-GE 101 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGG--GTCCTTEEEEECCSTTCCSCCCE-EE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhh--hcCCCceEEEecchhhCCCCCCC-CE
Confidence 356789999999999999999988643 799999999999864433321000 00024789999999998876555 66
Q ss_pred Eee---chhhh--cCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCcee----cCHHHHHHHHHhcCCeEE
Q 018970 234 IWV---QWCIG--HLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSIT----RSDFYFKELFSRCGLHIY 304 (348)
Q Consensus 234 Ii~---~~~l~--~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~----~s~~~l~~l~~~aGf~~v 304 (348)
|++ ...++ |++ +...+++++.++|||||.+++................... ...+.+..+++++||++.
T Consensus 102 v~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 102 LHVLMPWGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp EEEESCCHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEEccchhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 653 33332 666 4578999999999999999996432111000000011111 223457789999999998
Q ss_pred EEee
Q 018970 305 KSKD 308 (348)
Q Consensus 305 ~~~~ 308 (348)
+...
T Consensus 180 ~~~~ 183 (218)
T 3mq2_A 180 DCRY 183 (218)
T ss_dssp EEEE
T ss_pred eeec
Confidence 8654
No 107
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.62 E-value=3.3e-15 Score=135.63 Aligned_cols=140 Identities=16% Similarity=0.039 Sum_probs=108.7
Q ss_pred CC-CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CCCCce
Q 018970 155 NN-QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRY 231 (348)
Q Consensus 155 ~~-~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~f 231 (348)
.. ++.+|||+|||+|.++..++.++...|+++|+++.+++.|++++...++ ..++.+.+.|+.++. .+.++|
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~-----~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQL-----EDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGGGGTSCTTCE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCC-----cccEEEEECcHHHhhhhhccCCc
Confidence 45 6789999999999999999877665899999999999999999876543 346999999998875 335799
Q ss_pred eEEeechhhhcC------------------ChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHH
Q 018970 232 DVIWVQWCIGHL------------------TDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFK 293 (348)
Q Consensus 232 D~Ii~~~~l~~~------------------~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~ 293 (348)
|+|+++..+... ...++..+++.+.++|||||.+++.... ....++.
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---------------~~~~~~~ 185 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP---------------ERLLDII 185 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT---------------TTHHHHH
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH---------------HHHHHHH
Confidence 999998665433 1134678999999999999999995321 2345688
Q ss_pred HHHHhcCCeEEEEeecCCCCc
Q 018970 294 ELFSRCGLHIYKSKDQKGLPE 314 (348)
Q Consensus 294 ~l~~~aGf~~v~~~~~~~~~~ 314 (348)
..+++.||...........+.
T Consensus 186 ~~l~~~~~~~~~~~~v~~~~~ 206 (259)
T 3lpm_A 186 DIMRKYRLEPKRIQFVHPRSD 206 (259)
T ss_dssp HHHHHTTEEEEEEEEEESSTT
T ss_pred HHHHHCCCceEEEEEeecCCC
Confidence 899999999888766554443
No 108
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.62 E-value=3.6e-15 Score=131.37 Aligned_cols=132 Identities=16% Similarity=0.156 Sum_probs=102.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CCCCceeE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~ 233 (348)
++.+|||||||+|.++..++...+. .|+++|+|+.+++.|++++...++ .++.+.++|+.+++ .++++||+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~D~ 114 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV------PNIKLLWVDGSDLTDYFEDGEIDR 114 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------SSEEEEECCSSCGGGTSCTTCCSE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCCCCCCE
Confidence 4568999999999999999988654 799999999999999998765332 46899999998866 55678999
Q ss_pred EeechhhhcCChh------hHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 234 IWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 234 Ii~~~~l~~~~~~------d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
|+++....+.... ....+++.+.++|+|||.+++..... ...+.+.++++++||.++...
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------------~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR--------------GLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH--------------HHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH--------------HHHHHHHHHHHHCCCeeeecc
Confidence 9998664332211 13579999999999999999875211 012457788899999988765
Q ss_pred e
Q 018970 308 D 308 (348)
Q Consensus 308 ~ 308 (348)
.
T Consensus 181 ~ 181 (214)
T 1yzh_A 181 L 181 (214)
T ss_dssp S
T ss_pred c
Confidence 3
No 109
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.62 E-value=1.2e-15 Score=145.97 Aligned_cols=138 Identities=14% Similarity=0.184 Sum_probs=107.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..+..+|||||||+|.++..++.+++. .++++|+ +.|++.|++ ..++++...|+.+ +.+ . ||+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~~-~-~D~ 270 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------------LSGIEHVGGDMFA-SVP-Q-GDA 270 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCC-C-EEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------------cCCCEEEeCCccc-CCC-C-CCE
Confidence 356689999999999999999988765 6888899 899976643 1358999999987 444 3 999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc----------eecC----CCCceecCHHHHHHHHHhc
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF----------VLDK----EDRSITRSDFYFKELFSRC 299 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~----------~~d~----~~~~~~~s~~~l~~l~~~a 299 (348)
|++..++||+++++...++++++++|||||.|++.+....... ..+. ......++.++|.++++++
T Consensus 271 v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 350 (372)
T 1fp1_D 271 MILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLS 350 (372)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHT
T ss_pred EEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHC
Confidence 9999999999976667999999999999999999875432211 0010 0112236889999999999
Q ss_pred CCeEEEEee
Q 018970 300 GLHIYKSKD 308 (348)
Q Consensus 300 Gf~~v~~~~ 308 (348)
||++++...
T Consensus 351 Gf~~~~~~~ 359 (372)
T 1fp1_D 351 GFSKFQVAC 359 (372)
T ss_dssp TCSEEEEEE
T ss_pred CCceEEEEE
Confidence 999998765
No 110
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.61 E-value=3.3e-15 Score=141.77 Aligned_cols=139 Identities=15% Similarity=0.247 Sum_probs=108.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..+..+|||||||+|.++..+++.++. +++++|+ +.|++.|++. .++++...|+.+ +.+ .||+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~p--~~D~ 249 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------------NNLTYVGGDMFT-SIP--NADA 249 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------------TTEEEEECCTTT-CCC--CCSE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------------CCcEEEeccccC-CCC--CccE
Confidence 345679999999999999999988654 7999999 9999876531 348999999976 433 3999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCC---CcEEEEEecccCCCc----------eecCC---CCceecCHHHHHHHHH
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKP---GGFFVLKENIARSGF----------VLDKE---DRSITRSDFYFKELFS 297 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~Lkp---gG~lii~~~~~~~~~----------~~d~~---~~~~~~s~~~l~~l~~ 297 (348)
|++.+++||+++++...++++++++||| ||++++.+....... ..+.. .....++.++|.++++
T Consensus 250 v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~ 329 (352)
T 1fp2_A 250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFI 329 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHH
T ss_pred EEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHH
Confidence 9999999999976667999999999999 999999886543211 01100 0122368899999999
Q ss_pred hcCCeEEEEeec
Q 018970 298 RCGLHIYKSKDQ 309 (348)
Q Consensus 298 ~aGf~~v~~~~~ 309 (348)
++||++++....
T Consensus 330 ~aGf~~~~~~~~ 341 (352)
T 1fp2_A 330 EAGFQHYKISPL 341 (352)
T ss_dssp HTTCCEEEEEEE
T ss_pred HCCCCeeEEEec
Confidence 999999987653
No 111
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.61 E-value=1.6e-15 Score=129.37 Aligned_cols=118 Identities=13% Similarity=0.159 Sum_probs=96.0
Q ss_pred cCCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC---CCCc
Q 018970 154 RNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGR 230 (348)
Q Consensus 154 ~~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~ 230 (348)
+++++.+|||||||. | .+|+|+.|++.|+++... ++++.+.|+.+++. ++++
T Consensus 9 g~~~g~~vL~~~~g~--------------v-~vD~s~~ml~~a~~~~~~----------~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS--------------S-PVEALKGLVDKLQALTGN----------EGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp TCCTTSEEEEEECTT--------------S-CHHHHHHHHHHHHHHTTT----------TSEEEEEEGGGGGGGCCCSSC
T ss_pred CCCCCCEEEEecCCc--------------e-eeeCCHHHHHHHHHhccc----------CcEEEEechhcCccccCCCCC
Confidence 467889999999996 2 299999999999998743 38899999988876 6789
Q ss_pred eeEEeechhhhcC-ChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEE
Q 018970 231 YDVIWVQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIY 304 (348)
Q Consensus 231 fD~Ii~~~~l~~~-~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v 304 (348)
||+|+++.++||+ + +...++++++++|||||.|++.+..... .....+.++.+++.++++++|| +.
T Consensus 64 fD~V~~~~~l~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 64 FDIILSGLVPGSTTL--HSAEILAEIARILRPGGCLFLKEPVETA-----VDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp EEEEEECCSTTCCCC--CCHHHHHHHHHHEEEEEEEEEEEEEESS-----SCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred EeEEEECChhhhccc--CHHHHHHHHHHHCCCCEEEEEEcccccc-----cccccccCCHHHHHHHHHHCCC-cE
Confidence 9999999999999 6 5689999999999999999996543211 1113344688999999999999 44
No 112
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.60 E-value=1.2e-14 Score=133.69 Aligned_cols=142 Identities=11% Similarity=0.085 Sum_probs=99.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcC-CHHHHHHHHHHh-----CCCCCCCcCCCcceeEEEcCCCCCC--C-
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP-VSHFLDAARESL-----APENHMAPDMHKATNFFCVPLQDFT--P- 226 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~-S~~~l~~a~~~~-----~~~~~~~~~~~~~i~~~~~d~~~~~--~- 226 (348)
.++.+|||+|||+|.++..++..+...|+++|+ |+.+++.|++++ ...++... ...++.+...++.+.. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETV-KRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccC-CCCCeEEEEecCCCccHHHH
Confidence 456799999999999999888776657999999 899999999988 33222000 0035777766655431 1
Q ss_pred ---CCCceeEEeechhhhcCChhhHHHHHHHHHHcCC---C--CcEEEEEecccCCCceecCCCCceecCHHHHHHHHHh
Q 018970 227 ---ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLK---P--GGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSR 298 (348)
Q Consensus 227 ---~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~Lk---p--gG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~ 298 (348)
..++||+|++..+++|.+ +...+++.+.++|+ | ||.+++........ .......+.+.+++
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~--~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~---------~~~~~~~~~~~l~~ 225 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQ--AHDALLRSVKMLLALPANDPTAVALVTFTHHRPH---------LAERDLAFFRLVNA 225 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGG--GHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------------CTHHHHHHHH
T ss_pred hhccCCCCCEEEEeCcccChH--HHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc---------cchhHHHHHHHHHh
Confidence 247899999999999866 78899999999999 9 99887753221100 01122456778899
Q ss_pred cC-CeEEEEeec
Q 018970 299 CG-LHIYKSKDQ 309 (348)
Q Consensus 299 aG-f~~v~~~~~ 309 (348)
.| |++......
T Consensus 226 ~G~f~v~~~~~~ 237 (281)
T 3bzb_A 226 DGALIAEPWLSP 237 (281)
T ss_dssp STTEEEEEEECC
T ss_pred cCCEEEEEeccc
Confidence 99 998876443
No 113
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.60 E-value=2.8e-15 Score=133.64 Aligned_cols=147 Identities=19% Similarity=0.159 Sum_probs=95.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCC-HHHHHHH---HHHhCCCCCCCcCCCcceeEEEcCCCCCCCC-CC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPV-SHFLDAA---RESLAPENHMAPDMHKATNFFCVPLQDFTPE-TG 229 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S-~~~l~~a---~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~ 229 (348)
.++.+|||||||+|.++..++..... .|+|+|+| +.|++.| ++++...++ .++.+.++|+.+++.. .+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~------~~v~~~~~d~~~l~~~~~d 96 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL------SNVVFVIAAAESLPFELKN 96 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC------SSEEEECCBTTBCCGGGTT
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC------CCeEEEEcCHHHhhhhccC
Confidence 46679999999999999999865544 79999999 7787776 665544332 4689999999988632 24
Q ss_pred ceeEEeechhhhcCC---hhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCce-ecCHH-----HHHHHHHhcC
Q 018970 230 RYDVIWVQWCIGHLT---DDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSI-TRSDF-----YFKELFSRCG 300 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~---~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~-~~s~~-----~l~~l~~~aG 300 (348)
.+|.|+++....+.. ..+...++++++++|||||.+++.................. ..+.. ++..+++++|
T Consensus 97 ~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aG 176 (225)
T 3p2e_A 97 IADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSG 176 (225)
T ss_dssp CEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHT
T ss_pred eEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcC
Confidence 566666654322110 01235789999999999999999443222100000000000 12223 3889999999
Q ss_pred CeEEEEee
Q 018970 301 LHIYKSKD 308 (348)
Q Consensus 301 f~~v~~~~ 308 (348)
|++.....
T Consensus 177 f~v~~~~~ 184 (225)
T 3p2e_A 177 FRIDDVKE 184 (225)
T ss_dssp CEEEEEEE
T ss_pred CCeeeeee
Confidence 99888654
No 114
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.60 E-value=2.1e-14 Score=126.53 Aligned_cols=137 Identities=12% Similarity=-0.016 Sum_probs=96.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC----CCCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPETG 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~~~~ 229 (348)
+.++.+|||+|||+|.++..++.... ..|+++|+|+.|++.+.+.... ..++.+...|+.+. +.. +
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~-~ 125 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE--------RNNIIPLLFDASKPWKYSGIV-E 125 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH--------CSSEEEECSCTTCGGGTTTTC-C
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc--------CCCeEEEEcCCCCchhhcccc-c
Confidence 56788999999999999999987653 3799999999988766655433 23577888888763 333 7
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHH----HHHHhcCCeEEE
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFK----ELFSRCGLHIYK 305 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~----~l~~~aGf~~v~ 305 (348)
+||+|++.. .++ ++...++++++++|||||.|++..... . . + ...+.+++. +.++++ |++++
T Consensus 126 ~fD~V~~~~-~~~---~~~~~~l~~~~r~LkpgG~l~i~~~~~---~-~---~--~~~~~~~~~~~~~~~l~~~-f~~~~ 191 (210)
T 1nt2_A 126 KVDLIYQDI-AQK---NQIEILKANAEFFLKEKGEVVIMVKAR---S-I---D--STAEPEEVFKSVLKEMEGD-FKIVK 191 (210)
T ss_dssp CEEEEEECC-CST---THHHHHHHHHHHHEEEEEEEEEEEEHH---H-H---C--TTSCHHHHHHHHHHHHHTT-SEEEE
T ss_pred ceeEEEEec-cCh---hHHHHHHHHHHHHhCCCCEEEEEEecC---C-c---c--ccCCHHHHHHHHHHHHHhh-cEEee
Confidence 899999873 221 245567999999999999999984221 0 0 0 112333332 237888 99999
Q ss_pred EeecCCCCc
Q 018970 306 SKDQKGLPE 314 (348)
Q Consensus 306 ~~~~~~~~~ 314 (348)
.....++..
T Consensus 192 ~~~~~p~~~ 200 (210)
T 1nt2_A 192 HGSLMPYHR 200 (210)
T ss_dssp EEECTTTCT
T ss_pred eecCCCCCC
Confidence 888766544
No 115
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.59 E-value=5.6e-15 Score=130.40 Aligned_cols=131 Identities=14% Similarity=0.206 Sum_probs=99.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CCCCceeE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~ 233 (348)
++.+|||||||+|.++..++...+. .|+|+|+|+.|++.|++++...++ .++.+.++|+.+++ +++++||.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~------~nv~~~~~d~~~l~~~~~~~~~d~ 111 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA------QNVKLLNIDADTLTDVFEPGEVKR 111 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC------SSEEEECCCGGGHHHHCCTTSCCE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCcCCcCE
Confidence 4568999999999999999987654 799999999999999998765432 46899999988764 45678999
Q ss_pred EeechhhhcCChh------hHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 234 IWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 234 Ii~~~~l~~~~~~------d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
|+++....+.... ....+++.+.++|||||.|++..... ...+++.+.+++.||......
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~--------------~~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR--------------GLFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH--------------HHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH--------------HHHHHHHHHHHHCCCcccccc
Confidence 9886543322210 13579999999999999999875221 012346778888999877654
No 116
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.58 E-value=4.4e-15 Score=127.26 Aligned_cols=126 Identities=18% Similarity=0.223 Sum_probs=99.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||+|||+|.++..++..+ ..|+++|+|+.+++.+++++...++ ..++.+.+.|+.+.....++||+|
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v 104 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGL-----GDNVTLMEGDAPEALCKIPDIDIA 104 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTC-----CTTEEEEESCHHHHHTTSCCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCC-----CcceEEEecCHHHhcccCCCCCEE
Confidence 5677899999999999999998777 6799999999999999998765332 246889998876621112589999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
++..+++ ++..+++.+.++|+|||.+++..... .+...+.+++++.||.+..
T Consensus 105 ~~~~~~~-----~~~~~l~~~~~~l~~gG~l~~~~~~~--------------~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 105 VVGGSGG-----ELQEILRIIKDKLKPGGRIIVTAILL--------------ETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp EESCCTT-----CHHHHHHHHHHTEEEEEEEEEEECBH--------------HHHHHHHHHHHHTTCCCEE
T ss_pred EECCchH-----HHHHHHHHHHHhcCCCcEEEEEecCc--------------chHHHHHHHHHHCCCceEE
Confidence 9988775 45789999999999999999976321 2345688899999995433
No 117
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.58 E-value=2.3e-15 Score=144.23 Aligned_cols=108 Identities=21% Similarity=0.216 Sum_probs=92.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+..+|+++|+| .|++.|++++...++ ..++++.++|+.+++.+ ++||+|
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~~D~I 133 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNL-----DHIVEVIEGSVEDISLP-EKVDVI 133 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTC-----TTTEEEEESCGGGCCCS-SCEEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCC-----CCeEEEEECchhhcCcC-CcceEE
Confidence 46778999999999999999998877689999999 999999998876544 35699999999998876 899999
Q ss_pred eechhhhcCCh-hhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 235 WVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 235 i~~~~l~~~~~-~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
++.++.+++.. .++..+++.+.++|||||.|++..
T Consensus 134 v~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 134 ISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 99776666543 468889999999999999998754
No 118
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.58 E-value=2.5e-15 Score=129.73 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=90.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~ 233 (348)
.++.+|||+|||+|.++..++..+...|+++|+|+.|++.|++++...++ .++++.++|+.++. .+.++||+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~fD~ 116 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL------SGATLRRGAVAAVVAAGTTSPVDL 116 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC------SCEEEEESCHHHHHHHCCSSCCSE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC------CceEEEEccHHHHHhhccCCCccE
Confidence 45679999999999999988877766899999999999999998765322 36899999987764 23478999
Q ss_pred EeechhhhcCChhhHHHHHHHHHH--cCCCCcEEEEEecc
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKENI 271 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~--~LkpgG~lii~~~~ 271 (348)
|+++.++++.. ++...+++.+.+ +|+|||.+++....
T Consensus 117 i~~~~p~~~~~-~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 117 VLADPPYNVDS-ADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp EEECCCTTSCH-HHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EEECCCCCcch-hhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 99998877652 378899999999 99999999997643
No 119
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.58 E-value=3.8e-15 Score=135.11 Aligned_cols=128 Identities=15% Similarity=0.119 Sum_probs=103.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+. .|+++|+|+.+++.|++++...++ .+++...|+.+. .+.++||+|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~-------~v~~~~~d~~~~-~~~~~fD~Vv 189 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGV-------RPRFLEGSLEAA-LPFGPFDLLV 189 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTC-------CCEEEESCHHHH-GGGCCEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCC-------cEEEEECChhhc-CcCCCCCEEE
Confidence 4667999999999999999887777 799999999999999998765322 278888887652 2246899999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeecCC
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQKG 311 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~~ 311 (348)
++...+ .+..+++.+.++|||||.++++.... .+.+.+.++++++||+++.......
T Consensus 190 ~n~~~~-----~~~~~l~~~~~~LkpgG~lils~~~~--------------~~~~~v~~~l~~~Gf~~~~~~~~~~ 246 (254)
T 2nxc_A 190 ANLYAE-----LHAALAPRYREALVPGGRALLTGILK--------------DRAPLVREAMAGAGFRPLEEAAEGE 246 (254)
T ss_dssp EECCHH-----HHHHHHHHHHHHEEEEEEEEEEEEEG--------------GGHHHHHHHHHHTTCEEEEEEEETT
T ss_pred ECCcHH-----HHHHHHHHHHHHcCCCCEEEEEeecc--------------CCHHHHHHHHHHCCCEEEEEeccCC
Confidence 976655 35689999999999999999976432 2467899999999999998776543
No 120
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.58 E-value=9e-15 Score=132.66 Aligned_cols=100 Identities=23% Similarity=0.322 Sum_probs=85.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
++.+|||||||+|.++..++..+. +|+++|+|+.|++.|+++... .+.+.|+.+++.++++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~------------~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK------------NVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS------------CEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC------------CEEECcHHHCCCCCCCEEEEEE
Confidence 567999999999999999987755 699999999999999988631 2788899988877789999999
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
..+++|+.+ ++..+++++.++|||||.+++...
T Consensus 121 ~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 121 LGDVLSYVE-NKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CSSHHHHCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhhccc-cHHHHHHHHHHHcCCCeEEEEEeC
Confidence 887776632 588999999999999999999753
No 121
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.58 E-value=2.2e-14 Score=124.34 Aligned_cols=111 Identities=12% Similarity=-0.001 Sum_probs=89.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-C-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCce
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~f 231 (348)
+.++.+|||+|||+|.++..++... . ..|+++|+|+.+++.|++++...++ ..++++.+.|+.+++ ..+++|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL-----IDRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC-----GGGEEEECSCGGGGGGTCCSCE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHhhhccCCc
Confidence 4567899999999999999998773 2 3799999999999999999876433 357999999988775 445789
Q ss_pred eEEeechhhh-------cCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 232 DVIWVQWCIG-------HLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 232 D~Ii~~~~l~-------~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
|+|+++..+. ....++...+++++.++|||||.+++...
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 9999987551 11123567899999999999999999864
No 122
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.57 E-value=2.3e-14 Score=127.82 Aligned_cols=145 Identities=10% Similarity=-0.045 Sum_probs=102.7
Q ss_pred cCCCCCcEEEEeccccHHHHHHHHhC-C-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC---CCCC
Q 018970 154 RNNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPET 228 (348)
Q Consensus 154 ~~~~~~~VLDvGcG~G~~~~~la~~~-~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~ 228 (348)
.+.++.+|||+|||+|.++..++... . ..|+++|+|+.|++.+.+++.. ..++.+..+|+.+. +...
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~ 145 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--------RTNIIPVIEDARHPHKYRMLI 145 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------CTTEEEECSCTTCGGGGGGGC
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--------cCCeEEEEcccCChhhhcccC
Confidence 35678899999999999999999773 2 4799999999988877766543 24688999999873 3345
Q ss_pred CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
++||+|++..+ ..+....+++++.++|||||.+++........+ . ......++. + .++++++||++++...
T Consensus 146 ~~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~--~-~~~~~~~~~-~-~~~l~~~Gf~~~~~~~ 216 (233)
T 2ipx_A 146 AMVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDS--T-ASAEAVFAS-E-VKKMQQENMKPQEQLT 216 (233)
T ss_dssp CCEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCS--S-SCHHHHHHH-H-HHTTGGGTEEEEEEEE
T ss_pred CcEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEEEccccccc--C-CCHHHHHHH-H-HHHHHHCCCceEEEEe
Confidence 78999998554 222446678999999999999999643210000 0 000000222 2 5888999999999777
Q ss_pred cCCCCcc
Q 018970 309 QKGLPEE 315 (348)
Q Consensus 309 ~~~~~~~ 315 (348)
...++..
T Consensus 217 ~~~~~~~ 223 (233)
T 2ipx_A 217 LEPYERD 223 (233)
T ss_dssp CTTTSSS
T ss_pred cCCccCC
Confidence 7666654
No 123
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.56 E-value=1.2e-14 Score=131.46 Aligned_cols=130 Identities=15% Similarity=0.045 Sum_probs=101.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC---CCce
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRY 231 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~f 231 (348)
.++.+|||||||+|..+..++...+. +|+++|+|+.+++.|++++...++ .++++.++|+++++.. .++|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l------~~v~~~~~d~~~~~~~~~~~~~f 152 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL------KGARALWGRAEVLAREAGHREAY 152 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEECCHHHHTTSTTTTTCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC------CceEEEECcHHHhhcccccCCCc
Confidence 56789999999999999999877544 799999999999999998875443 3589999999887642 3789
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
|+|++..+ . ++..+++.+.++|||||.+++...... .-....+.+.++..||++......
T Consensus 153 D~I~s~a~----~--~~~~ll~~~~~~LkpgG~l~~~~g~~~------------~~e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 153 ARAVARAV----A--PLCVLSELLLPFLEVGGAAVAMKGPRV------------EEELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp EEEEEESS----C--CHHHHHHHHGGGEEEEEEEEEEECSCC------------HHHHTTHHHHHHHHTEEEEEEEEE
T ss_pred eEEEECCc----C--CHHHHHHHHHHHcCCCeEEEEEeCCCc------------HHHHHHHHHHHHHcCCeEEEEEEe
Confidence 99998643 3 567899999999999999988653210 011234677888999998886654
No 124
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.56 E-value=1.1e-14 Score=139.62 Aligned_cols=219 Identities=19% Similarity=0.229 Sum_probs=138.7
Q ss_pred cchhhhhhhhh--hHhhhhhcccCCCCCCCCcccccccCCCCCCCcccCHHHHHHHh---hcCC--ccchhh-hhhHHH-
Q 018970 37 TLHLLHVGRRK--EKLRSAEAGAAADPKHKESSAMEVSGLDSDGKEFKNAEEMWREQ---IGED--GEQQEK-KTQWYR- 107 (348)
Q Consensus 37 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~w~~~---l~~~--~~~~~~-~~~~y~- 107 (348)
..-|+.+|+.| ..++..++.+.+.- +..+.+.+.|.+.+| ++...+.. ++.. ..+... .-.|+.
T Consensus 103 d~v~~~~Pk~k~~~~~~~~l~~~~~~l--~~g~~i~~~g~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (381)
T 3dmg_A 103 DLVVLALPAGRGTAYVQASLVAAARAL--RMGGRLYLAGDKNKG-----FERYFKEARALLGYGVVVRREGPYRVALLEK 175 (381)
T ss_dssp EEEEEECCGGGCHHHHHHHHHHHHHHE--EEEEEEEEEEEGGGT-----HHHHHHHHHHHHSCEEEEEEETTEEEEEEEC
T ss_pred CEEEEECCcchhHHHHHHHHHHHHHhC--CCCCEEEEEEccHHH-----HHHHHHHHHhhhccccccccccCcEEEEEEc
Confidence 34577799877 45677776655411 124566678888888 55555543 2210 001011 111121
Q ss_pred -----hhhhccccccccccc---cccCccccccc-ChhhhHHHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHh
Q 018970 108 -----EGISYWEGVEASVDG---VLGGFGNVNEV-DIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIR 178 (348)
Q Consensus 108 -----~~~~yW~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~ 178 (348)
.....|......+.+ .+.....++.. ........+...+...+.. ...++.+|||+|||+|.++..++..
T Consensus 176 ~~~~p~~~~~w~~~~~~~~g~~~~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~-~~~~~~~VLDlGcG~G~~~~~la~~ 254 (381)
T 3dmg_A 176 EKEAPPLPSLWRAFSARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGP-EGVRGRQVLDLGAGYGALTLPLARM 254 (381)
T ss_dssp CSCCCCCCCCCEEEEEEETTEEEEEEECTTCTTTTSCCHHHHHHHHHHHHHHCT-TTTTTCEEEEETCTTSTTHHHHHHT
T ss_pred cCCCCCCccccceeeEEecCceEEEEeCCCceeCCCCCHHHHHHHHHHHHhhcc-cCCCCCEEEEEeeeCCHHHHHHHHc
Confidence 123445433222111 11111223332 1233344444444433210 1235679999999999999999987
Q ss_pred CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeechhhhc---CChhhHHHHHHHH
Q 018970 179 YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH---LTDDDFVSFFKRA 255 (348)
Q Consensus 179 ~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~~~l~~---~~~~d~~~~l~~~ 255 (348)
+. +|+++|+|+.+++.|++++...+ ..+++.+.|+.+...+.++||+|+++.++|+ ...++...+++++
T Consensus 255 g~-~V~gvDis~~al~~A~~n~~~~~-------~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~ 326 (381)
T 3dmg_A 255 GA-EVVGVEDDLASVLSLQKGLEANA-------LKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVA 326 (381)
T ss_dssp TC-EEEEEESBHHHHHHHHHHHHHTT-------CCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHH
T ss_pred CC-EEEEEECCHHHHHHHHHHHHHcC-------CCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHH
Confidence 65 69999999999999999986542 2488999999988766679999999999998 3345788999999
Q ss_pred HHcCCCCcEEEEEecc
Q 018970 256 KVGLKPGGFFVLKENI 271 (348)
Q Consensus 256 ~~~LkpgG~lii~~~~ 271 (348)
.++|||||.+++..+.
T Consensus 327 ~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 327 AARLRPGGVFFLVSNP 342 (381)
T ss_dssp HHHEEEEEEEEEEECT
T ss_pred HHhcCcCcEEEEEEcC
Confidence 9999999999998643
No 125
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.55 E-value=2.5e-14 Score=131.44 Aligned_cols=130 Identities=15% Similarity=0.150 Sum_probs=103.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+...|+++|+|+.|++.|++++...++ ..++++.++|+.++.. .++||+|+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~-----~~~v~~~~~D~~~~~~-~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCCC-CSCEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECCHHHhcc-cCCccEEE
Confidence 45789999999999999999988776799999999999999998875443 3458899999999876 57999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
+.... ....+++.+.++|||||.+++.+....... .....+.+.+.++++|+++..
T Consensus 198 ~~~p~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 198 MGYVV------RTHEFIPKALSIAKDGAIIHYHNTVPEKLM--------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGT--------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ECCch------hHHHHHHHHHHHCCCCeEEEEEEeeccccc--------cccHHHHHHHHHHHcCCeeEE
Confidence 86442 235789999999999999999875431110 112456788999999999766
No 126
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=7.6e-14 Score=126.94 Aligned_cols=136 Identities=15% Similarity=0.089 Sum_probs=101.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCC---CCCCCcCCCcceeEEEcCCCCC------
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAP---ENHMAPDMHKATNFFCVPLQDF------ 224 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~---~~~~~~~~~~~i~~~~~d~~~~------ 224 (348)
..++.+|||+|||+|.++..++.+... .|+++|+++.+++.|++++.. .++ ..++++.+.|+.++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l-----~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF-----SARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT-----GGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC-----cceEEEEeCCHHHHhhhhhh
Confidence 456679999999999999999988754 799999999999999999876 543 34689999999887
Q ss_pred -CCCCCceeEEeechhhhcC----------------ChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceec
Q 018970 225 -TPETGRYDVIWVQWCIGHL----------------TDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITR 287 (348)
Q Consensus 225 -~~~~~~fD~Ii~~~~l~~~----------------~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~ 287 (348)
..++++||+|+++..+... ....+..+++.+.++|||||.|++.... .
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---------------~ 173 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP---------------Q 173 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG---------------G
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH---------------H
Confidence 2345789999998544322 2234788999999999999999986421 1
Q ss_pred CHHHHHHHHHhcCCeEEEEeecCC
Q 018970 288 SDFYFKELFSRCGLHIYKSKDQKG 311 (348)
Q Consensus 288 s~~~l~~l~~~aGf~~v~~~~~~~ 311 (348)
...++.+++++. |..+.......
T Consensus 174 ~~~~~~~~l~~~-~~~~~i~~v~~ 196 (260)
T 2ozv_A 174 SVAEIIAACGSR-FGGLEITLIHP 196 (260)
T ss_dssp GHHHHHHHHTTT-EEEEEEEEEES
T ss_pred HHHHHHHHHHhc-CCceEEEEEcC
Confidence 234566777764 77666554433
No 127
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.55 E-value=1.2e-13 Score=123.30 Aligned_cols=150 Identities=11% Similarity=-0.031 Sum_probs=99.8
Q ss_pred cCCccCCCCCcEEEEeccccHHHHHHHHhCC-C-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--
Q 018970 150 FPNARNNQHLVALDCGSGIGRITKNLLIRYF-N-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-- 225 (348)
Q Consensus 150 l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~-~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-- 225 (348)
+....+.++.+|||+|||+|.++..++.... . .|+++|+|+.|++...+.... ..++.+...|+....
T Consensus 69 l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--------r~nv~~i~~Da~~~~~~ 140 (232)
T 3id6_C 69 LKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--------RPNIFPLLADARFPQSY 140 (232)
T ss_dssp CSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--------CTTEEEEECCTTCGGGT
T ss_pred hhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--------cCCeEEEEcccccchhh
Confidence 3334578899999999999999999987632 2 799999999997655444322 246889999987632
Q ss_pred -CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEE
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIY 304 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v 304 (348)
...++||+|++..+. + +....++..+.++|||||.|+++..........+... ......+.++++||+++
T Consensus 141 ~~~~~~~D~I~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e-----~~~~~~~~L~~~gf~~~ 211 (232)
T 3id6_C 141 KSVVENVDVLYVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKE-----IYKTEVEKLENSNFETI 211 (232)
T ss_dssp TTTCCCEEEEEECCCC---T-THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSS-----STTHHHHHHHHTTEEEE
T ss_pred hccccceEEEEecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHH-----HHHHHHHHHHHCCCEEE
Confidence 113689999987553 2 1333445666779999999999842211000111111 11235567788899999
Q ss_pred EEeecCCCCccc
Q 018970 305 KSKDQKGLPEEL 316 (348)
Q Consensus 305 ~~~~~~~~~~~l 316 (348)
+.....++..+.
T Consensus 212 ~~~~l~p~~~~h 223 (232)
T 3id6_C 212 QIINLDPYDKDH 223 (232)
T ss_dssp EEEECTTTCSSC
T ss_pred EEeccCCCcCce
Confidence 988877775543
No 128
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.55 E-value=2.8e-15 Score=128.68 Aligned_cols=119 Identities=10% Similarity=0.044 Sum_probs=91.3
Q ss_pred hhhhHHHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcc
Q 018970 135 IKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKA 213 (348)
Q Consensus 135 ~~~~~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~ 213 (348)
++..+.++...+.. +.++.+|||+|||+|.++..++...+. +|+++|+|+.|++.+++++...|. ..+
T Consensus 33 Lp~ld~fY~~~~~~------l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~-----~~~ 101 (200)
T 3fzg_A 33 VATLNDFYTYVFGN------IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT-----TIK 101 (200)
T ss_dssp GGGHHHHHHHHHHH------SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC-----SSE
T ss_pred hHhHHHHHHHHHhh------cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC-----Ccc
Confidence 44455555555543 356789999999999999999766433 899999999999999999876543 224
Q ss_pred eeEEEcCCCCCCCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 214 TNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 214 i~~~~~d~~~~~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+.+ .|..... +.++||+|++..++|++. +....+.++.+.|+|||+++-.+
T Consensus 102 v~~--~d~~~~~-~~~~~DvVLa~k~LHlL~--~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 102 YRF--LNKESDV-YKGTYDVVFLLKMLPVLK--QQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEE--ECCHHHH-TTSEEEEEEEETCHHHHH--HTTCCHHHHHHTCEEEEEEEEEE
T ss_pred EEE--ecccccC-CCCCcChhhHhhHHHhhh--hhHHHHHHHHHHhCCCCEEEEeC
Confidence 444 5554433 347899999999999994 56677779999999999988776
No 129
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.55 E-value=1.1e-14 Score=133.89 Aligned_cols=103 Identities=14% Similarity=0.047 Sum_probs=85.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
+.++.+|||||||+|.++..++.+. ..+|+++|+|+.|++.|++++...|+ .+++|.++|+.+++ +++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl------~~v~~v~gDa~~l~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV------DGVNVITGDETVID--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC------CSEEEEESCGGGGG--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC------CCeEEEECchhhCC--CCCcCE
Confidence 7889999999999998775554443 33799999999999999999865432 46899999998875 578999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
|++... .+ +...+++++.++|||||.|++...
T Consensus 192 V~~~a~---~~--d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 192 LMVAAL---AE--PKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEECTT---CS--CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEECCC---cc--CHHHHHHHHHHHcCCCcEEEEEcC
Confidence 998654 34 778999999999999999999764
No 130
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.54 E-value=2e-14 Score=135.84 Aligned_cols=104 Identities=16% Similarity=0.143 Sum_probs=87.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..+++.+...|+++|+|+ |++.|++++...++ ..++++..+|+.+++.++++||+|
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~D~I 135 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKL-----EDTITLIKGKIEEVHLPVEKVDVI 135 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTSCCSCSCEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCC-----CCcEEEEEeeHHHhcCCCCcEEEE
Confidence 456789999999999999999887665899999996 99999998765443 357999999999988776899999
Q ss_pred eech---hhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 018970 235 WVQW---CIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (348)
Q Consensus 235 i~~~---~l~~~~~~d~~~~l~~~~~~LkpgG~li 266 (348)
++.+ .+.+.. ++..+++++.++|||||.++
T Consensus 136 vs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 136 ISEWMGYFLLFES--MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EECCCBTTBTTTC--HHHHHHHHHHHHEEEEEEEE
T ss_pred EEcCchhhccCHH--HHHHHHHHHHhhcCCCcEEE
Confidence 9877 344444 67889999999999999998
No 131
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.54 E-value=1.5e-14 Score=131.75 Aligned_cols=158 Identities=16% Similarity=0.164 Sum_probs=110.5
Q ss_pred hhHHHHHHHHhhhcCCccCCCCCcEEEEeccc--cHHHHHHHHh-CCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCc
Q 018970 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGI--GRITKNLLIR-YFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHK 212 (348)
Q Consensus 137 ~~~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~--G~~~~~la~~-~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~ 212 (348)
....|+.+.+..... -....+|||||||+ +..+..++++ .+. .|+++|.|+.|++.|++++...+ ..
T Consensus 61 ~nr~fl~rav~~l~~---~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~------~~ 131 (277)
T 3giw_A 61 ANRDWMNRAVAHLAK---EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP------EG 131 (277)
T ss_dssp HHHHHHHHHHHHHHH---TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS------SS
T ss_pred HHHHHHHHHHHHhcc---ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC------CC
Confidence 345666666554321 12235899999997 4455556554 232 79999999999999999986521 24
Q ss_pred ceeEEEcCCCCCCC----C--CCcee-----EEeechhhhcCChhh-HHHHHHHHHHcCCCCcEEEEEecccCCC-c---
Q 018970 213 ATNFFCVPLQDFTP----E--TGRYD-----VIWVQWCIGHLTDDD-FVSFFKRAKVGLKPGGFFVLKENIARSG-F--- 276 (348)
Q Consensus 213 ~i~~~~~d~~~~~~----~--~~~fD-----~Ii~~~~l~~~~~~d-~~~~l~~~~~~LkpgG~lii~~~~~~~~-~--- 276 (348)
+++|.++|+.++.. + .+.|| .|+++.+|||+++.+ +..+++++.+.|+|||+|++++...... .
T Consensus 132 ~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~ 211 (277)
T 3giw_A 132 RTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVG 211 (277)
T ss_dssp EEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHH
T ss_pred cEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHH
Confidence 69999999988520 1 24455 688999999999744 7899999999999999999987553211 0
Q ss_pred ----eecC-CCCceecCHHHHHHHHHhcCCeEEE
Q 018970 277 ----VLDK-EDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 277 ----~~d~-~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
.+.. ......++.+++..+|. ||++++
T Consensus 212 ~~~~~~~~~g~p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 212 RVAREYAARNMPMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHHHHHTTCCCCCCCHHHHHHTTT--TSEECT
T ss_pred HHHHHHHhcCCCCccCCHHHHHHHhC--CCcccC
Confidence 0111 11223379999999995 999876
No 132
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.54 E-value=1.7e-14 Score=137.06 Aligned_cols=138 Identities=14% Similarity=0.224 Sum_probs=107.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.+..+|||||||+|.++..++++++. .++++|+ +.+++.+++ ..++++...|+.+ +.+ .||+|
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~~--~~D~v 255 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------------NENLNFVGGDMFK-SIP--SADAV 255 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------------CSSEEEEECCTTT-CCC--CCSEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------------CCCcEEEeCccCC-CCC--CceEE
Confidence 34579999999999999999988765 7899999 788875542 1348999999987 544 49999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCC---CcEEEEEecccCCCc----------eecC----CCCceecCHHHHHHHHH
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKP---GGFFVLKENIARSGF----------VLDK----EDRSITRSDFYFKELFS 297 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~Lkp---gG~lii~~~~~~~~~----------~~d~----~~~~~~~s~~~l~~l~~ 297 (348)
++.+++||+++++...++++++++|+| ||.++|.+....... ..+. ......++.++|.++++
T Consensus 256 ~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~ 335 (358)
T 1zg3_A 256 LLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIY 335 (358)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHH
T ss_pred EEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHH
Confidence 999999999976677999999999999 999999876533211 0000 00112368999999999
Q ss_pred hcCCeEEEEeec
Q 018970 298 RCGLHIYKSKDQ 309 (348)
Q Consensus 298 ~aGf~~v~~~~~ 309 (348)
++||++++....
T Consensus 336 ~aGf~~~~~~~~ 347 (358)
T 1zg3_A 336 DAGFSSYKITPI 347 (358)
T ss_dssp HTTCCEEEEEEE
T ss_pred HcCCCeeEEEec
Confidence 999999987764
No 133
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.54 E-value=6.3e-15 Score=128.82 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=86.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--CCCc-eeE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGR-YDV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~-fD~ 233 (348)
++.+|||+|||+|.++..++.++...|+++|+|+.|++.|++++...++. ..++++.+.|+.++.. .+++ ||+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS----SEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC----TTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC----ccceEEEECCHHHHHHhhccCCCCCE
Confidence 45699999999999999888777768999999999999999988654320 0468999999876532 2468 999
Q ss_pred EeechhhhcCChhhHHHHHHHH--HHcCCCCcEEEEEecc
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRA--KVGLKPGGFFVLKENI 271 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~--~~~LkpgG~lii~~~~ 271 (348)
|++..+++ .. +...+++.+ .++|+|||.+++....
T Consensus 129 I~~~~~~~-~~--~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 129 VFLDPPFH-FN--LAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EEECCCSS-SC--HHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred EEECCCCC-Cc--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 99988854 33 677888888 6789999999997644
No 134
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.53 E-value=2.6e-14 Score=130.96 Aligned_cols=131 Identities=17% Similarity=0.195 Sum_probs=101.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.++.+|||+|||+|.++..++..... .|+++|+|+.+++.|++++...++ .++++.+.|+.+.. +.++||+|
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~------~~v~~~~~d~~~~~-~~~~fD~I 180 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI------KNIHILQSDWFSAL-AGQQFAMI 180 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCSTTGGG-TTCCEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEEcchhhhc-ccCCccEE
Confidence 35679999999999999999876543 799999999999999998765332 26889999987743 24789999
Q ss_pred eechh-------------hhcCCh----------hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHH
Q 018970 235 WVQWC-------------IGHLTD----------DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFY 291 (348)
Q Consensus 235 i~~~~-------------l~~~~~----------~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~ 291 (348)
+++.. ++|.+. +++..+++.+.++|+|||++++.... .+.+.
T Consensus 181 v~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~---------------~~~~~ 245 (276)
T 2b3t_A 181 VSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW---------------QQGEA 245 (276)
T ss_dssp EECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS---------------SCHHH
T ss_pred EECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc---------------hHHHH
Confidence 99843 333321 35678999999999999999986321 24677
Q ss_pred HHHHHHhcCCeEEEEee
Q 018970 292 FKELFSRCGLHIYKSKD 308 (348)
Q Consensus 292 l~~l~~~aGf~~v~~~~ 308 (348)
+.++++++||..+....
T Consensus 246 ~~~~l~~~Gf~~v~~~~ 262 (276)
T 2b3t_A 246 VRQAFILAGYHDVETCR 262 (276)
T ss_dssp HHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHCCCcEEEEEe
Confidence 99999999998766543
No 135
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.53 E-value=1.7e-13 Score=121.57 Aligned_cols=143 Identities=13% Similarity=0.060 Sum_probs=102.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-C-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---CCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~ 229 (348)
+.++.+|||+|||+|.++..++... . ..|+++|+|+.|++.+++++.. ..++++.+.|+.+.. ...+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~--------~~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE--------RRNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--------CTTEEEEECCTTCGGGGTTTCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--------cCCCEEEEccCCCcchhhcccC
Confidence 5677899999999999999998773 2 4799999999999999998865 257899999998732 1235
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
+||+|++... ..+....+++++.++|||||.+++...... . +..........+++.++ .++ |++++....
T Consensus 143 ~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~--~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~ 212 (227)
T 1g8a_A 143 KVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIAVKSRS--I--DVTKEPEQVFREVEREL-SEY-FEVIERLNL 212 (227)
T ss_dssp CEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEEEEGGG--T--CTTSCHHHHHHHHHHHH-HTT-SEEEEEEEC
T ss_pred CceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEEEecCC--C--CCCCChhhhhHHHHHHH-Hhh-ceeeeEecc
Confidence 8999997654 122345669999999999999999721111 0 10011112344566666 777 999988776
Q ss_pred CCCCcc
Q 018970 310 KGLPEE 315 (348)
Q Consensus 310 ~~~~~~ 315 (348)
..+...
T Consensus 213 ~~~~~~ 218 (227)
T 1g8a_A 213 EPYEKD 218 (227)
T ss_dssp TTTSSS
T ss_pred CcccCC
Confidence 655443
No 136
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.53 E-value=3.1e-14 Score=122.08 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=89.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCc-ceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||+|||+|.++..++.. ...|+++|+|+.+++.+++++...++ .. ++++...|+.+... .++||+
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~d~~~~~~-~~~~D~ 122 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNL-----DNYDIRVVHSDLYENVK-DRKYNK 122 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTC-----TTSCEEEEECSTTTTCT-TSCEEE
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECchhcccc-cCCceE
Confidence 456789999999999999999877 44799999999999999998765432 11 38999999887443 478999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
|+++.++++. .++...+++++.++|+|||.+++....
T Consensus 123 v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 123 IITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp EEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred EEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 9999888763 246789999999999999999998743
No 137
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.53 E-value=2.5e-14 Score=125.24 Aligned_cols=102 Identities=19% Similarity=0.085 Sum_probs=87.0
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.|++++...++ .++++...|+.+.....++||+|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDL------HNVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCC------CceEEEECCcccCCccCCCccEE
Confidence 5678899999999999999998874 4699999999999999998865433 36899999998766556799999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
++..+++|+++ .+.++|||||++++....
T Consensus 148 ~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 99999999883 588999999999998644
No 138
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.53 E-value=1.8e-14 Score=136.69 Aligned_cols=106 Identities=17% Similarity=0.157 Sum_probs=89.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||||||+|.++..+++.+...|+++|+| .|++.|++++...++ ..++++..+|+.+++.+.++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKL-----DHVVTIIKGKVEEVELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCC-----CCcEEEEECcHHHccCCCCceEEEE
Confidence 4567999999999999999998866689999999 599999998876544 3459999999999987778999999
Q ss_pred echhhhcCC-hhhHHHHHHHHHHcCCCCcEEEE
Q 018970 236 VQWCIGHLT-DDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 236 ~~~~l~~~~-~~d~~~~l~~~~~~LkpgG~lii 267 (348)
+.++.+++. ..++..+++.+.++|||||.++.
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 977655442 23788999999999999999875
No 139
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.52 E-value=2.2e-14 Score=136.03 Aligned_cols=107 Identities=16% Similarity=0.137 Sum_probs=91.2
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+...|+++|+|+ |++.|++++...++ ..++++...|+.+++.+ ++||+|
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l-----~~~v~~~~~d~~~~~~~-~~~D~I 120 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEEVSLP-EQVDII 120 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEE
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCC-----CCcEEEEEcchhhCCCC-CceeEE
Confidence 356789999999999999999877666899999996 89999988765443 35799999999988765 689999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
++..+++|+..++....+..+.++|||||.+++.
T Consensus 121 vs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 121 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 9999999887767788889999999999999864
No 140
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.52 E-value=4.2e-15 Score=129.87 Aligned_cols=132 Identities=13% Similarity=0.004 Sum_probs=83.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCC-----C
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----G 229 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~ 229 (348)
.++.+|||+|||+|.++..++..+.. .|+++|+|+.|++.|++++...+ .++++.+.|+.+ +.+. +
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~-~~~~~~~~~~ 100 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG-------AVVDWAAADGIE-WLIERAERGR 100 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------------CCHHHHHH-HHHHHHHTTC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC-------CceEEEEcchHh-hhhhhhhccC
Confidence 56789999999999999999988654 79999999999999999876532 156777777766 3222 7
Q ss_pred ceeEEeechhhhcCC------hhh------------------HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCce
Q 018970 230 RYDVIWVQWCIGHLT------DDD------------------FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSI 285 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~------~~d------------------~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~ 285 (348)
+||+|+++..+++.. ... +..+++++.++|||||.+++.+...
T Consensus 101 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------- 167 (215)
T 4dzr_A 101 PWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH------------- 167 (215)
T ss_dssp CBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT-------------
T ss_pred cccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC-------------
Confidence 899999975554322 111 1788999999999999954443211
Q ss_pred ecCHHHHHHHHH--hcCCeEEEEeec
Q 018970 286 TRSDFYFKELFS--RCGLHIYKSKDQ 309 (348)
Q Consensus 286 ~~s~~~l~~l~~--~aGf~~v~~~~~ 309 (348)
...+.+.++++ +.||..+.....
T Consensus 168 -~~~~~~~~~l~~~~~gf~~~~~~~~ 192 (215)
T 4dzr_A 168 -NQADEVARLFAPWRERGFRVRKVKD 192 (215)
T ss_dssp -SCHHHHHHHTGGGGGGTEECCEEEC
T ss_pred -ccHHHHHHHHHHhhcCCceEEEEEe
Confidence 24567889999 999987775543
No 141
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.52 E-value=1.2e-14 Score=133.18 Aligned_cols=112 Identities=16% Similarity=0.158 Sum_probs=86.1
Q ss_pred CCCcEEEEeccccH----HHHHHHHhCC-----CcEEEEcCCHHHHHHHHHHhCCC----CCC---------------C-
Q 018970 157 QHLVALDCGSGIGR----ITKNLLIRYF-----NEVDLLEPVSHFLDAARESLAPE----NHM---------------A- 207 (348)
Q Consensus 157 ~~~~VLDvGcG~G~----~~~~la~~~~-----~~v~~vD~S~~~l~~a~~~~~~~----~~~---------------~- 207 (348)
++.+|||+|||+|. ++..|++... .+|+|+|+|+.|++.|++..-.. ++. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 5555655411 16999999999999999864100 000 0
Q ss_pred -----cCCCcceeEEEcCCCCCCCC-CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 208 -----PDMHKATNFFCVPLQDFTPE-TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 208 -----~~~~~~i~~~~~d~~~~~~~-~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
.....++.|.+.|+.+.+++ .++||+|+|.++++|++++....++++++++|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 00113689999999885443 47899999999999999877899999999999999999985
No 142
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.52 E-value=9.4e-15 Score=129.56 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=86.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-C--CCCCcee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T--PETGRYD 232 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~--~~~~~fD 232 (348)
++.+|||||||+|.++..++...+. .|+|+|+|+.|++.|++++...++ .++.+.++|+.++ + +++++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l------~nv~~~~~Da~~~l~~~~~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL------SNLRVMCHDAVEVLHKMIPDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC------SSEEEECSCHHHHHHHHSCTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC------CcEEEEECCHHHHHHHHcCCCChh
Confidence 4568999999999999999988765 799999999999999998765432 4689999998774 2 4568999
Q ss_pred EEeechhhhcCChhhH------HHHHHHHHHcCCCCcEEEEEec
Q 018970 233 VIWVQWCIGHLTDDDF------VSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~------~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.|++.....+...... ..+++.+.++|||||.|++...
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 9998754443332221 2599999999999999999864
No 143
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=6.2e-14 Score=119.22 Aligned_cols=122 Identities=13% Similarity=0.131 Sum_probs=98.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||+|||+|.++..++. ....|+++|+|+.+++.+++++...++ .++++.+.|+.+ +.+.++||+|
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~~d~~~-~~~~~~~D~i 104 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI------KNCQIIKGRAED-VLDKLEFNKA 104 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC------CSEEEEESCHHH-HGGGCCCSEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC------CcEEEEECCccc-cccCCCCcEE
Confidence 45677999999999999999987 444799999999999999998865432 358899999877 4444689999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKS 306 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~ 306 (348)
++..+ . ++..+++.+.++ |||.+++..... .+...+.+.+++.||.+...
T Consensus 105 ~~~~~----~--~~~~~l~~~~~~--~gG~l~~~~~~~--------------~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 105 FIGGT----K--NIEKIIEILDKK--KINHIVANTIVL--------------ENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp EECSC----S--CHHHHHHHHHHT--TCCEEEEEESCH--------------HHHHHHHHHHHHTTCEEEEE
T ss_pred EECCc----c--cHHHHHHHHhhC--CCCEEEEEeccc--------------ccHHHHHHHHHHcCCeEEEE
Confidence 99888 2 677899999998 999999987432 12456889999999876654
No 144
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.52 E-value=6.1e-14 Score=124.72 Aligned_cols=129 Identities=14% Similarity=0.007 Sum_probs=106.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
+.++.+|||||||+|.++..++..++. .|+++|+++.+++.|++++...++ ..++++..+|+.+...+...||+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl-----~~~I~~~~gD~l~~~~~~~~~D~ 93 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL-----TSKIDVRLANGLSAFEEADNIDT 93 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGGGCCCE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECchhhccccccccCE
Confidence 456789999999999999999987654 799999999999999999887655 45699999998876544347999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
|++.++... -+..++....+.|+++|.|++..+. ..+.+++++.+.||.+++...
T Consensus 94 IviaGmGg~----lI~~IL~~~~~~l~~~~~lIlqp~~----------------~~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 94 ITICGMGGR----LIADILNNDIDKLQHVKTLVLQPNN----------------REDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp EEEEEECHH----HHHHHHHHTGGGGTTCCEEEEEESS----------------CHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEeCCchH----HHHHHHHHHHHHhCcCCEEEEECCC----------------ChHHHHHHHHHCCCEEEEEEE
Confidence 987655442 4678999999999999999998742 256799999999999998664
No 145
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.52 E-value=1.6e-14 Score=132.98 Aligned_cols=139 Identities=13% Similarity=0.026 Sum_probs=94.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---CCCCceeE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETGRYDV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~fD~ 233 (348)
++.+|||+|||||.++..+++.+...|+++|+|+.|++.+.++... ...+...++..+. .+..+||+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~r----------v~~~~~~ni~~l~~~~l~~~~fD~ 154 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDR----------VRSMEQYNFRYAEPVDFTEGLPSF 154 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTT----------EEEECSCCGGGCCGGGCTTCCCSE
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcc----------cceecccCceecchhhCCCCCCCE
Confidence 4669999999999999999988776899999999999986543211 0111122332222 22245999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc-cCCC-ceecCC----CCcee-cCHHHHHHHHHhcCCeEEEE
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI-ARSG-FVLDKE----DRSIT-RSDFYFKELFSRCGLHIYKS 306 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~-~~~~-~~~d~~----~~~~~-~s~~~l~~l~~~aGf~~v~~ 306 (348)
|++..+++++ ..+|.++.++|||||.+++.... .+.+ ...+.. +...+ .+.+++.++++++||.+...
T Consensus 155 v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 155 ASIDVSFISL-----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp EEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 9998888754 47999999999999999986211 1111 011110 11112 46778999999999998886
Q ss_pred eecC
Q 018970 307 KDQK 310 (348)
Q Consensus 307 ~~~~ 310 (348)
...+
T Consensus 230 ~~sp 233 (291)
T 3hp7_A 230 DFSP 233 (291)
T ss_dssp EECS
T ss_pred EECC
Confidence 6543
No 146
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.51 E-value=1.1e-13 Score=120.77 Aligned_cols=121 Identities=12% Similarity=0.039 Sum_probs=95.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
++.+|||+|||+|.++..++...+ ..|+++|+|+.+++.+++++...++ .++++...|+.+++. .++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~-~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL------ENIEPVQSRVEEFPS-EPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------SSEEEEECCTTTSCC-CSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEecchhhCCc-cCCcCEEE
Confidence 357999999999999999987753 3799999999999999998765432 348999999988763 37899999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
++.. . ++..+++.+.++|+|||.+++.... ...+++.++++ ||+++...
T Consensus 138 ~~~~----~--~~~~~l~~~~~~L~~gG~l~~~~~~---------------~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 138 SRAF----A--SLNDMVSWCHHLPGEQGRFYALKGQ---------------MPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp CSCS----S--SHHHHHHHHTTSEEEEEEEEEEESS---------------CCHHHHHTSCT--TEEEEEEE
T ss_pred Eecc----C--CHHHHHHHHHHhcCCCcEEEEEeCC---------------CchHHHHHHhc--CCceeeee
Confidence 8542 2 5779999999999999999997421 23455666655 89887744
No 147
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.51 E-value=4.5e-14 Score=129.33 Aligned_cols=126 Identities=15% Similarity=0.143 Sum_probs=100.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-CC-CcEEEEcCCHHHHHHHHHHhCCC-CCCCcCCCcceeEEEcCCCCCCCCCCce
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~~-~~v~~vD~S~~~l~~a~~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~f 231 (348)
+.++.+|||+|||+|.++..++.. .. ..|+++|+|+.+++.|++++... + ..++++.+.|+.+ ..++++|
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g------~~~v~~~~~d~~~-~~~~~~f 180 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD------IGNVRTSRSDIAD-FISDQMY 180 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC------CTTEEEECSCTTT-CCCSCCE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC------CCcEEEEECchhc-cCcCCCc
Confidence 567789999999999999999877 22 37999999999999999988653 3 2468999999987 3344789
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
|+|++ +++ +...+++++.++|||||.+++..... ...+.+.+.+++.||..++...
T Consensus 181 D~Vi~-----~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~--------------~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 181 DAVIA-----DIP--DPWNHVQKIASMMKPGSVATFYLPNF--------------DQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp EEEEE-----CCS--CGGGSHHHHHHTEEEEEEEEEEESSH--------------HHHHHHHHHSGGGTEEEEEEEE
T ss_pred cEEEE-----cCc--CHHHHHHHHHHHcCCCCEEEEEeCCH--------------HHHHHHHHHHHHCCCeEEEEEE
Confidence 99998 455 45689999999999999999987432 1235677888899999887554
No 148
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.51 E-value=3.4e-14 Score=133.65 Aligned_cols=106 Identities=16% Similarity=0.178 Sum_probs=87.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||||||+|.++..+++.+...|+++|+| .|++.|++++...++ ..++++...|+.+++.+.++||+|+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~D~Iv 110 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGF-----SDKITLLRGKLEDVHLPFPKVDIII 110 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTC-----TTTEEEEESCTTTSCCSSSCEEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCC-----CCCEEEEECchhhccCCCCcccEEE
Confidence 4567999999999999999987766689999999 699999998765443 3568999999999877667999999
Q ss_pred echhhhcCC-hhhHHHHHHHHHHcCCCCcEEEE
Q 018970 236 VQWCIGHLT-DDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 236 ~~~~l~~~~-~~d~~~~l~~~~~~LkpgG~lii 267 (348)
+.++.+++. ...+..++..+.++|||||.++.
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 986555443 23678899999999999999974
No 149
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.51 E-value=5.4e-14 Score=134.25 Aligned_cols=112 Identities=15% Similarity=0.016 Sum_probs=88.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhC-------CCCCCCcCCCcceeEEEcCCCCCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLA-------PENHMAPDMHKATNFFCVPLQDFTP 226 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~-------~~~~~~~~~~~~i~~~~~d~~~~~~ 226 (348)
+.++.+|||||||+|.++..++..... .|+|+|+|+.|++.|+++.. ..|+. ..+++|.++|+.++++
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~----~~rVefi~GD~~~lp~ 246 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK----HAEYTLERGDFLSEEW 246 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC----CCEEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC----CCCeEEEECcccCCcc
Confidence 678889999999999999999866444 59999999999999987531 11110 1479999999998765
Q ss_pred CC--CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccC
Q 018970 227 ET--GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (348)
Q Consensus 227 ~~--~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~ 273 (348)
.+ ..||+|+++..++ . .+....|+++.++|||||.|++.+.+..
T Consensus 247 ~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 247 RERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 32 4799999987653 2 3788899999999999999999875543
No 150
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.50 E-value=7.5e-15 Score=131.43 Aligned_cols=142 Identities=15% Similarity=0.004 Sum_probs=89.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEE-cCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~fD~I 234 (348)
.++.+|||||||+|.++..+++.+...|+++|+|+.|++.++++....... ...++.+.. .++....+....||++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~D~v 112 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVM---EQFNFRNAVLADFEQGRPSFTSIDVS 112 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEE---CSCCGGGCCGGGCCSCCCSEEEECCS
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcccccc---ccceEEEeCHhHcCcCCCCEEEEEEE
Confidence 345699999999999999999887668999999999999988764321000 001222222 2332211122345555
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc-cCCCc-eecC-----CCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI-ARSGF-VLDK-----EDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~-~~~~~-~~d~-----~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
+++ + ..+++++.++|||||.+++.... ...+. .... .......+.+++.++++++||+++...
T Consensus 113 ~~~-----l-----~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 113 FIS-----L-----DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp SSC-----G-----GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred hhh-----H-----HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 543 2 46999999999999999986310 00000 0110 011112477889999999999988876
Q ss_pred ecC
Q 018970 308 DQK 310 (348)
Q Consensus 308 ~~~ 310 (348)
...
T Consensus 183 ~~p 185 (232)
T 3opn_A 183 FSP 185 (232)
T ss_dssp ECS
T ss_pred Ecc
Confidence 544
No 151
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.50 E-value=1.3e-13 Score=122.35 Aligned_cols=128 Identities=15% Similarity=0.055 Sum_probs=103.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD 232 (348)
+.++.+|||||||+|.++..++..++. .|+++|+++.+++.|++++...++ ..++++...|..+ ++.. ..||
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~i~~~~~d~l~~l~~~-~~~D 86 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL-----KEKIQVRLANGLAAFEET-DQVS 86 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGG-GCCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECchhhhcccC-cCCC
Confidence 456789999999999999999987654 799999999999999999887655 3469999999854 4322 2699
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+|++.++-. +-+..++..+.+.|+|+|+|++..+. ..+.+++.+.+.||.+++...
T Consensus 87 ~IviaG~Gg----~~i~~Il~~~~~~L~~~~~lVlq~~~----------------~~~~vr~~L~~~Gf~i~~e~l 142 (225)
T 3kr9_A 87 VITIAGMGG----RLIARILEEGLGKLANVERLILQPNN----------------REDDLRIWLQDHGFQIVAESI 142 (225)
T ss_dssp EEEEEEECH----HHHHHHHHHTGGGCTTCCEEEEEESS----------------CHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEcCCCh----HHHHHHHHHHHHHhCCCCEEEEECCC----------------CHHHHHHHHHHCCCEEEEEEE
Confidence 999765432 24678999999999999999997641 246789999999999998653
No 152
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.49 E-value=7.7e-16 Score=137.90 Aligned_cols=141 Identities=13% Similarity=0.040 Sum_probs=103.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
++.+|||+|||+|.++..++..+ ..|+++|+|+.|++.|++++...++ ..++++.++|+.+++ ++++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGI-----ADKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCC-----CcCeEEEECChHHhc-ccCCCCEEEE
Confidence 56899999999999999999876 4699999999999999998865433 247999999998876 3479999999
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCC-CceecCCCCceecCHHHHHHHHHhcCCeEEEEeec
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS-GFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~-~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
+.++++.. +....+.++.++|+|||.+++....... ..... .....+.+.+..++...|.-.++....
T Consensus 151 ~~~~~~~~--~~~~~~~~~~~~L~pgG~~i~~~~~~~~~~~~~~---lp~~~~~~~~~~~l~~~g~~~i~~~~~ 219 (241)
T 3gdh_A 151 SPPWGGPD--YATAETFDIRTMMSPDGFEIFRLSKKITNNIVYF---LPRNADIDQVASLAGPGGQVEIEQNFL 219 (241)
T ss_dssp CCCCSSGG--GGGSSSBCTTTSCSSCHHHHHHHHHHHCSCEEEE---EETTBCHHHHHHTTCTTCCEEEEEEEE
T ss_pred CCCcCCcc--hhhhHHHHHHhhcCCcceeHHHHHHhhCCceEEE---CCCCCCHHHHHHHhccCCCEEEEehhh
Confidence 99999877 4445778899999999997664311100 00000 000135667888888877666554443
No 153
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.49 E-value=1.1e-13 Score=124.04 Aligned_cols=129 Identities=12% Similarity=-0.002 Sum_probs=104.7
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
+.++.+|||||||+|.++..++..++. .|+++|+++.+++.|++++...++ ..++++..+|+.+...+..+||+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~I~v~~gD~l~~~~~~~~~D~ 93 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL-----TEQIDVRKGNGLAVIEKKDAIDT 93 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGGGCCCE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEecchhhccCccccccE
Confidence 456789999999999999999987654 799999999999999999877654 35699999998775544335999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
|++.++-. +-+..++....+.|+++|+|++..+. ..+.+++.+.+.||.+++...
T Consensus 94 IviagmGg----~lI~~IL~~~~~~L~~~~~lIlq~~~----------------~~~~lr~~L~~~Gf~i~~E~l 148 (244)
T 3gnl_A 94 IVIAGMGG----TLIRTILEEGAAKLAGVTKLILQPNI----------------AAWQLREWSEQNNWLITSEAI 148 (244)
T ss_dssp EEEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS----------------CHHHHHHHHHHHTEEEEEEEE
T ss_pred EEEeCCch----HHHHHHHHHHHHHhCCCCEEEEEcCC----------------ChHHHHHHHHHCCCEEEEEEE
Confidence 98755433 24678999999999999999998742 256789999999999988653
No 154
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.49 E-value=2.8e-14 Score=121.45 Aligned_cols=108 Identities=13% Similarity=0.108 Sum_probs=85.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-CCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~I 234 (348)
.++.+|||+|||+|.++..++..+...|+++|+|+.|++.|++++...++ ..++++...|+.++ +...+.||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-----ENRFTLLKMEAERAIDCLTGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-----GGGEEEECSCHHHHHHHBCSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECcHHHhHHhhcCCCCEE
Confidence 45679999999999999999877555899999999999999999876433 34689999998773 3223679999
Q ss_pred eechhhhcCChhhHHHHHHHHH--HcCCCCcEEEEEecc
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAK--VGLKPGGFFVLKENI 271 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~--~~LkpgG~lii~~~~ 271 (348)
+++.+++. .....+++.+. ++|+|||.+++....
T Consensus 105 ~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 105 FLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp EECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 99877643 24566777776 999999999997644
No 155
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.49 E-value=1.3e-13 Score=122.46 Aligned_cols=100 Identities=20% Similarity=0.136 Sum_probs=85.0
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+ ..|+++|+|+.+++.+++++... + ++++...|+.+.....++||+|
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~-------~-~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYY-------N-NIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTC-------S-SEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhc-------C-CeEEEECCcccccccCCCccEE
Confidence 4677899999999999999999877 56999999999999999998763 2 6889999987733334789999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
++..+++|+. ..+.++|+|||.+++....
T Consensus 139 ~~~~~~~~~~--------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 139 VVWATAPTLL--------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EESSBBSSCC--------HHHHHTEEEEEEEEEEECS
T ss_pred EECCcHHHHH--------HHHHHHcCCCcEEEEEEcC
Confidence 9999999987 2588999999999998654
No 156
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.49 E-value=8.5e-14 Score=133.21 Aligned_cols=111 Identities=19% Similarity=0.151 Sum_probs=87.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.++.+|||+|||+|.++..++..++ .+|+++|+|+.|++.|++++...++. ...+++|...|+.+. .++++||+|
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~---~~~~v~~~~~D~~~~-~~~~~fD~I 296 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE---ALDRCEFMINNALSG-VEPFRFNAV 296 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG---GGGGEEEEECSTTTT-CCTTCEEEE
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC---cCceEEEEechhhcc-CCCCCeeEE
Confidence 4557999999999999999998864 37999999999999999988654321 012578899998873 345789999
Q ss_pred eechhhhcC---ChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 235 WVQWCIGHL---TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 235 i~~~~l~~~---~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+++.++|+. .+.....+++++.++|||||.+++..+
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 999999863 333455789999999999999999764
No 157
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.49 E-value=7e-14 Score=126.12 Aligned_cols=128 Identities=18% Similarity=0.138 Sum_probs=101.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-C-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
..++.+|||+|||+|.++..++.. + ...|+++|+|+.+++.|++++...++ ..++++...|+.+. .++++||
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~~~~~~D 164 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF-----DDRVTIKLKDIYEG-IEEENVD 164 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC-----TTTEEEECSCGGGC-CCCCSEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC-----CCceEEEECchhhc-cCCCCcC
Confidence 567889999999999999999987 4 23799999999999999998865433 34489999998865 3457899
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcC--CeEEEEeec
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCG--LHIYKSKDQ 309 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aG--f~~v~~~~~ 309 (348)
+|++. .+ +...+++++.++|+|||.+++..... .....+.+.+++.| |..++..+.
T Consensus 165 ~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~~--------------~~~~~~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 165 HVILD-----LP--QPERVVEHAAKALKPGGFFVAYTPCS--------------NQVMRLHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp EEEEC-----SS--CGGGGHHHHHHHEEEEEEEEEEESSH--------------HHHHHHHHHHHHTGGGBSCCEEECC
T ss_pred EEEEC-----CC--CHHHHHHHHHHHcCCCCEEEEEECCH--------------HHHHHHHHHHHHcCCCccccEEEEE
Confidence 99983 34 45679999999999999999976432 12456788899999 987775543
No 158
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.49 E-value=5.2e-14 Score=130.99 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=99.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--CCCcee
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYD 232 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~fD 232 (348)
.++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.|++++..... .....++++...|+.++.. .+++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR--SLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHHhccCCcee
Confidence 456799999999999999998653 34899999999999999998631000 0003568999999877542 357899
Q ss_pred EEeechhhhcCChhhH--HHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 233 VIWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~--~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+|++....++.+...+ ..+++.+.++|||||++++..... + ........+.+.++++||..+....
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~---~-------~~~~~~~~~~~~l~~~GF~~v~~~~ 239 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI---W-------LDLELIEKMSRFIRETGFASVQYAL 239 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT---T-------TCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc---c-------cchHHHHHHHHHHHhCCCCcEEEEE
Confidence 9999766655442222 689999999999999999874321 1 0012456788899999999777543
No 159
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.48 E-value=4.5e-14 Score=133.59 Aligned_cols=106 Identities=20% Similarity=0.232 Sum_probs=88.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
++.+|||+|||+|.++..++..++. +|+++|+|+.|++.+++++...+ ..+.+...|+.+.. +++||+|+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~-------~~~~~~~~d~~~~~--~~~fD~Iv 266 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANG-------VEGEVFASNVFSEV--KGRFDMII 266 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTT-------CCCEEEECSTTTTC--CSCEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-------CCCEEEEccccccc--cCCeeEEE
Confidence 4569999999999999999988764 79999999999999999876532 23567888887654 47899999
Q ss_pred echhhhcC---ChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 236 VQWCIGHL---TDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 236 ~~~~l~~~---~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
++.++|+. ..++...+++++.++|||||.+++..+.
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 99999863 2346789999999999999999998653
No 160
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.48 E-value=4.2e-14 Score=123.63 Aligned_cols=106 Identities=13% Similarity=0.113 Sum_probs=85.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CCCCCCceeEEe
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYDVIW 235 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~Ii 235 (348)
++.+|||+|||+|.++..++.++...|+++|+|+.|++.|++++...++ .++++.+.|+.+ ++...++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~D~~~~~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA------GNARVVNSNAMSFLAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCHHHHHSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEECCHHHHHhhcCCCCCEEE
Confidence 4579999999999999998878776899999999999999998865432 368999999876 344456899999
Q ss_pred echhhhcCChhhHHHHHHHHHH--cCCCCcEEEEEecc
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKENI 271 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~--~LkpgG~lii~~~~ 271 (348)
+...++ .. +...+++.+.+ +|+|||.+++....
T Consensus 128 ~~~p~~-~~--~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 128 VDPPFR-RG--LLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ECCSSS-TT--THHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ECCCCC-CC--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 987754 33 56678888866 59999999987643
No 161
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.48 E-value=1.5e-13 Score=123.88 Aligned_cols=127 Identities=18% Similarity=0.186 Sum_probs=100.7
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-C-CCcEEEEcCCHHHHHHHHHHhCCC-CCCCcCCCcceeEEEcCCCCCCCCCCce
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~-~~~v~~vD~S~~~l~~a~~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~f 231 (348)
+.++.+|||+|||+|.++..++.. + ...|+++|+|+.+++.|++++... + ..++++...|+.+.+.++++|
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g------~~~v~~~~~d~~~~~~~~~~~ 167 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ------VENVRFHLGKLEEAELEEAAY 167 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------CCCEEEEESCGGGCCCCTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC------CCCEEEEECchhhcCCCCCCc
Confidence 567789999999999999999987 3 237999999999999999987542 2 246899999998876666789
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
|+|++. .+ +...+++++.++|+|||.+++..... .....+.+.+++.||..++..+
T Consensus 168 D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~~--------------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 168 DGVALD-----LM--EPWKVLEKAALALKPDRFLVAYLPNI--------------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp EEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESCH--------------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred CEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCCH--------------HHHHHHHHHHHHCCCceEEEEE
Confidence 999983 34 45589999999999999999987432 1234567778889999877554
No 162
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.48 E-value=5.2e-15 Score=133.71 Aligned_cols=145 Identities=13% Similarity=-0.039 Sum_probs=95.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC---CCC---CC
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE---TG 229 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~---~~ 229 (348)
++.+|||+|||+|.++..++.+.. .+|+++|+|+.|++.|++++...++ ..++++.++|+.+. +.+ ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL-----SDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC-----CccEEEEEcchhhhhhhhhhcccCC
Confidence 567999999999999998887642 3799999999999999998865433 33589999997652 222 25
Q ss_pred ceeEEeechhhhcCCh-------------hhHHHHHHHHHHcCCCCcEEEEEecccC--------CCceecCCCCceecC
Q 018970 230 RYDVIWVQWCIGHLTD-------------DDFVSFFKRAKVGLKPGGFFVLKENIAR--------SGFVLDKEDRSITRS 288 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~-------------~d~~~~l~~~~~~LkpgG~lii~~~~~~--------~~~~~d~~~~~~~~s 288 (348)
+||+|+++..+++... +....++..++++|||||.+.+.+.... .++.... .....+
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~--~~~~~~ 217 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCM--LGKKCS 217 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEE--ESSTTS
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEEC--CCChhH
Confidence 8999999876665430 0123567889999999998877542211 1111100 001123
Q ss_pred HHHHHHHHHhcCCeEEEEee
Q 018970 289 DFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 289 ~~~l~~l~~~aGf~~v~~~~ 308 (348)
.+.+.++++++||..++...
T Consensus 218 ~~~~~~~l~~~Gf~~v~~~~ 237 (254)
T 2h00_A 218 LAPLKEELRIQGVPKVTYTE 237 (254)
T ss_dssp HHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHcCCCceEEEE
Confidence 46789999999999877554
No 163
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.47 E-value=1.4e-13 Score=124.24 Aligned_cols=107 Identities=18% Similarity=0.161 Sum_probs=85.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-CC--CCCc
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP--ETGR 230 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~--~~~~ 230 (348)
.++.+|||||||+|..+..++.... ..|+++|+|+.+++.|++++...++ ..++++..+|+.+. +. ..++
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~l~~~~~~~~ 136 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV-----DQRVTLREGPALQSLESLGECPA 136 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHTCCSCCC
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHhcCCCCC
Confidence 3567999999999999999997753 3799999999999999999876544 35799999988662 22 1258
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
||+|++... ..+...+++++.++|||||+|++.+...
T Consensus 137 fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 137 FDLIFIDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp CSEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred eEEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 999998553 2356789999999999999998876543
No 164
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.47 E-value=3.6e-14 Score=121.52 Aligned_cols=108 Identities=16% Similarity=0.117 Sum_probs=84.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC----CCCce
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRY 231 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~f 231 (348)
.++.+|||+|||+|.++..++..+...|+++|+|+.|++.|++++...++ ..++++...|+.+... ..++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE-----PEKFEVRKMDANRALEQFYEEKLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC-----CcceEEEECcHHHHHHHHHhcCCCC
Confidence 45679999999999999998876656899999999999999998765332 3468999999876421 14789
Q ss_pred eEEeechhhhcCChhhHHHHHHHH--HHcCCCCcEEEEEecc
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRA--KVGLKPGGFFVLKENI 271 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~--~~~LkpgG~lii~~~~ 271 (348)
|+|+++.+++.. +...+++.+ .++|+|||.+++....
T Consensus 118 D~i~~~~~~~~~---~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 118 DLVLLDPPYAKQ---EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEEECCCGGGC---CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CEEEECCCCCch---hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 999998886532 345666766 8899999999987643
No 165
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.47 E-value=1e-13 Score=124.22 Aligned_cols=115 Identities=11% Similarity=0.092 Sum_probs=81.7
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CC--CCCCc
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT--PETGR 230 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~--~~~~~ 230 (348)
..++.+|||||||+|.++..++...+. .|+|+|+|+.|++.|++++............++.+.++|+.+ ++ +++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 345678999999999999999877654 799999999999999876531000000002579999999987 54 55689
Q ss_pred eeEEeechhhhcCChhh------HHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDD------FVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d------~~~~l~~~~~~LkpgG~lii~~ 269 (348)
||.|++...-.+..... ...+++++.++|||||.|++..
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 99998764432221000 1479999999999999999865
No 166
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.47 E-value=7.8e-14 Score=137.55 Aligned_cols=106 Identities=16% Similarity=0.138 Sum_probs=90.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+..+|+++|+|+ |++.|++++...++ ..++++...|+.+++.+ ++||+|
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl-----~~~v~~~~~d~~~~~~~-~~fD~I 228 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEEVSLP-EQVDII 228 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEE
T ss_pred hcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCC-----CCcEEEEECchhhCccC-CCeEEE
Confidence 345679999999999999988876555899999998 99999988766543 35799999999987655 689999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
+++.+++|+..++....+..+.++|||||.+++
T Consensus 229 vs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 229 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp ECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 999988888766777888899999999999986
No 167
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.46 E-value=8.2e-14 Score=125.61 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=86.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHh--CC-CcEEEEcCCHHHHHHHHHHhCCC---CCCCcCCCcc----------------
Q 018970 156 NQHLVALDCGSGIGRITKNLLIR--YF-NEVDLLEPVSHFLDAARESLAPE---NHMAPDMHKA---------------- 213 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~--~~-~~v~~vD~S~~~l~~a~~~~~~~---~~~~~~~~~~---------------- 213 (348)
.++.+|||+|||+|.++..++.. .. .+|+++|+|+.|++.|++++... ++ ..+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 124 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL-----TARELERREQSERFGKPSY 124 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH-----HHHHHHHHHHHHHHCCHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc-----cccchhhhhhhhhcccccc
Confidence 35679999999999999999876 32 27999999999999999887542 11 011
Q ss_pred ---------ee-------------EEEcCCCCCCC-----CCCceeEEeechhhhcCCh-------hhHHHHHHHHHHcC
Q 018970 214 ---------TN-------------FFCVPLQDFTP-----ETGRYDVIWVQWCIGHLTD-------DDFVSFFKRAKVGL 259 (348)
Q Consensus 214 ---------i~-------------~~~~d~~~~~~-----~~~~fD~Ii~~~~l~~~~~-------~d~~~~l~~~~~~L 259 (348)
++ +.+.|+.+... ...+||+|+++.++++... +....+++++.++|
T Consensus 125 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~L 204 (250)
T 1o9g_A 125 LEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASAL 204 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHS
T ss_pred hhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhc
Confidence 56 99999887432 3348999999987776553 45678999999999
Q ss_pred CCCcEEEEEecc
Q 018970 260 KPGGFFVLKENI 271 (348)
Q Consensus 260 kpgG~lii~~~~ 271 (348)
+|||++++..+.
T Consensus 205 kpgG~l~~~~~~ 216 (250)
T 1o9g_A 205 PAHAVIAVTDRS 216 (250)
T ss_dssp CTTCEEEEEESS
T ss_pred CCCcEEEEeCcc
Confidence 999999996543
No 168
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.46 E-value=9.3e-14 Score=124.03 Aligned_cols=106 Identities=17% Similarity=0.176 Sum_probs=85.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--CCCcee
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYD 232 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~fD 232 (348)
.++.+|||||||+|..+..++.... ..|+++|+|+.+++.|++++...++ ..++++..+|+.+... .+++||
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD 144 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF-----ENQVRIIEGNALEQFENVNDKVYD 144 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCHHHHTTSCEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECCHHHHHHhhccCCcc
Confidence 3567999999999999999987432 3799999999999999999876543 3479999999977532 247899
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
+|++.... .+...+++.+.++|||||+|++.+..
T Consensus 145 ~V~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 145 MIFIDAAK-----AQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp EEEEETTS-----SSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred EEEEcCcH-----HHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 99976442 25778999999999999999885543
No 169
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.45 E-value=2.3e-13 Score=124.55 Aligned_cols=127 Identities=13% Similarity=0.068 Sum_probs=100.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-CC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
+.++.+|||+|||+|.++..++.. ++ ..|+++|+|+.+++.|++++...++ ..++++...|+.+. .+.++||
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~~~~~~D 183 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL-----IERVTIKVRDISEG-FDEKDVD 183 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC-----GGGEEEECCCGGGC-CSCCSEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHHHc-ccCCccC
Confidence 567789999999999999999987 43 3799999999999999998765432 34688999998776 4446899
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+|++. .+ +...+++.+.++|+|||.+++..... .....+.+.+++.||..++...
T Consensus 184 ~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~~--------------~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 184 ALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCPTT--------------NQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp EEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEESSH--------------HHHHHHHHHHHHSSEEEEEEEC
T ss_pred EEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCCH--------------HHHHHHHHHHHHCCCceeEEEE
Confidence 99983 33 45689999999999999999987421 1234577788889999877554
No 170
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.45 E-value=8.4e-14 Score=123.21 Aligned_cols=108 Identities=10% Similarity=0.092 Sum_probs=84.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-CC-C----
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP-E---- 227 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~-~---- 227 (348)
.++.+|||||||+|..+..++.... .+|+++|+|+.|++.|++++...++ ..++++..+|+.+. +. .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~l~~~~~~~~ 131 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL-----QDKVTILNGASQDLIPQLKKKYD 131 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHGGGTTTTSC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC-----CCceEEEECCHHHHHHHHHHhcC
Confidence 3557999999999999999987532 3799999999999999998865443 34699999997552 21 1
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
.++||+|++....++.. +...++..+ ++|||||+|++.+..
T Consensus 132 ~~~fD~V~~d~~~~~~~--~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 132 VDTLDMVFLDHWKDRYL--PDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCCCSEEEECSCGGGHH--HHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred CCceEEEEEcCCcccch--HHHHHHHhc-cccCCCeEEEEeCCC
Confidence 26899999988777654 455778888 999999999887643
No 171
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.45 E-value=8.4e-13 Score=111.16 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=92.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-CC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-------
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (348)
..++.+|||+|||+|.++..++.. +. ..++++|+|+ +++. .++++...|+.+.+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------------~~~~~~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------------VGVDFLQGDFRDELVMKALLE 82 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------------TTEEEEESCTTSHHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------------CcEEEEEcccccchhhhhhhc
Confidence 456779999999999999999887 34 4799999998 7531 35889999998865
Q ss_pred -CCCCceeEEeechhhhcCChhh---------HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHH
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDD---------FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKEL 295 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d---------~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l 295 (348)
.++++||+|+++.++++..... ...+++.+.++|+|||.+++...... +...+.+.
T Consensus 83 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------~~~~~~~~ 148 (180)
T 1ej0_A 83 RVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE--------------GFDEYLRE 148 (180)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST--------------THHHHHHH
T ss_pred cCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC--------------cHHHHHHH
Confidence 4557899999998888765321 16899999999999999998764321 23456666
Q ss_pred HHhcCCeEEEEee
Q 018970 296 FSRCGLHIYKSKD 308 (348)
Q Consensus 296 ~~~aGf~~v~~~~ 308 (348)
+++. |..+....
T Consensus 149 ~~~~-~~~~~~~~ 160 (180)
T 1ej0_A 149 IRSL-FTKVKVRK 160 (180)
T ss_dssp HHHH-EEEEEEEC
T ss_pred HHHh-hhhEEeec
Confidence 6664 77666543
No 172
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.45 E-value=1.8e-13 Score=128.06 Aligned_cols=103 Identities=20% Similarity=0.209 Sum_probs=86.2
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC--cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~--~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
+.++.+|||||||+|.++..++..+.. +|+++|+|+.+++.|++++...++ .++++...|+.+.....++||
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~------~~v~~~~~d~~~~~~~~~~fD 146 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------ENVIFVCGDGYYGVPEFSPYD 146 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCeEEEECChhhccccCCCeE
Confidence 567789999999999999999877542 599999999999999998765433 358999999887554457899
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
+|++..+++|+. +.+.++|||||.+++....
T Consensus 147 ~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 147 VIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCB
T ss_pred EEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECC
Confidence 999999999987 4678899999999997543
No 173
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.44 E-value=3e-13 Score=127.32 Aligned_cols=131 Identities=15% Similarity=0.097 Sum_probs=95.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCc-ceeEEEcCCCCCCCC----CCc
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTPE----TGR 230 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~----~~~ 230 (348)
.++.+|||+|||+|.++..++..+. .|+++|+|+.+++.|++++...++ .. ++++.+.|+.++... .++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl-----~~~~v~~i~~D~~~~l~~~~~~~~~ 225 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGL-----EQAPIRWICEDAMKFIQREERRGST 225 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTC-----TTSCEEEECSCHHHHHHHHHHHTCC
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECcHHHHHHHHHhcCCC
Confidence 3567999999999999999998777 799999999999999998765433 22 488999998775321 368
Q ss_pred eeEEeechhhhcCC--------hhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHH----h
Q 018970 231 YDVIWVQWCIGHLT--------DDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFS----R 298 (348)
Q Consensus 231 fD~Ii~~~~l~~~~--------~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~----~ 298 (348)
||+|++........ .+++..+++.+.++|+|||.|++...... ..+.+.+.++++ +
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~------------~~~~~~~~~~l~~a~~~ 293 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSI------------RASFYSMHELMRETMRG 293 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT------------TSCHHHHHHHHHHHTTT
T ss_pred ceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC------------CCCHHHHHHHHHHHHHH
Confidence 99999954421110 13578899999999999999888664321 123344444444 7
Q ss_pred cCCeEE
Q 018970 299 CGLHIY 304 (348)
Q Consensus 299 aGf~~v 304 (348)
+|+++.
T Consensus 294 ~g~~v~ 299 (332)
T 2igt_A 294 AGGVVA 299 (332)
T ss_dssp SCSEEE
T ss_pred cCCeEE
Confidence 898875
No 174
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.44 E-value=2.1e-13 Score=119.78 Aligned_cols=103 Identities=15% Similarity=0.055 Sum_probs=84.2
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
..++.+|||||||+|.++..++.... ..|+++|+|+.+++.+++++...++ .++.+...|+.......++||
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD 148 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY------DNVIVIVGDGTLGYEPLAPYD 148 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEECCcccCCCCCCCee
Confidence 56778999999999999999988763 4799999999999999998754322 358888888754333346899
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
+|++..+++|+. +++.++|||||.+++....
T Consensus 149 ~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 149 RIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EEEESSBBSSCC--------HHHHHTEEEEEEEEEEESS
T ss_pred EEEECCchHHHH--------HHHHHHcCCCcEEEEEECC
Confidence 999999999987 3789999999999998643
No 175
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.44 E-value=1.3e-13 Score=122.47 Aligned_cols=106 Identities=16% Similarity=0.181 Sum_probs=85.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCC-cceeEEEcCCCCCC--CCCCce
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCVPLQDFT--PETGRY 231 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~--~~~~~f 231 (348)
++.+|||||||+|..+..++.... ..|+++|+|+.+++.|++++...++ . .++++..+|+.++. ..+++|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~~i~~~~gda~~~l~~~~~~~f 130 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY-----SPSRVRFLLSRPLDVMSRLANDSY 130 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHGGGSCTTCE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcCcEEEEEcCHHHHHHHhcCCCc
Confidence 345999999999999999997643 3799999999999999999876544 3 57999999876642 224789
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
|+|++..... +...+++.+.++|||||+|++.+...
T Consensus 131 D~V~~d~~~~-----~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 131 QLVFGQVSPM-----DLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp EEEEECCCTT-----THHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred CeEEEcCcHH-----HHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 9999865432 56789999999999999999865443
No 176
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.44 E-value=1e-12 Score=124.68 Aligned_cols=131 Identities=18% Similarity=0.099 Sum_probs=102.0
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-C-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
..++.+|||+|||+|.++..++... . ..|+|+|+|+.|++.|++++...++ . ++++.+.|+.+++.+.+.||
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~-----~-~i~~~~~D~~~~~~~~~~~D 274 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL-----S-WIRFLRADARHLPRFFPEVD 274 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC-----T-TCEEEECCGGGGGGTCCCCS
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC-----C-ceEEEeCChhhCccccCCCC
Confidence 5677899999999999999998765 2 3699999999999999999876544 2 68999999999876667799
Q ss_pred EEeechhhhcCCh------hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEE
Q 018970 233 VIWVQWCIGHLTD------DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKS 306 (348)
Q Consensus 233 ~Ii~~~~l~~~~~------~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~ 306 (348)
+|+++..+..... +....+++.+.++|||||.+++... +.+.+.++++ .||+....
T Consensus 275 ~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~-----------------~~~~~~~~~~-~g~~~~~~ 336 (354)
T 3tma_A 275 RILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL-----------------RPALLKRALP-PGFALRHA 336 (354)
T ss_dssp EEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES-----------------CHHHHHHHCC-TTEEEEEE
T ss_pred EEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC-----------------CHHHHHHHhh-cCcEEEEE
Confidence 9999766543211 1246899999999999999999763 2344556666 89988775
Q ss_pred eec
Q 018970 307 KDQ 309 (348)
Q Consensus 307 ~~~ 309 (348)
...
T Consensus 337 ~~l 339 (354)
T 3tma_A 337 RVV 339 (354)
T ss_dssp EEC
T ss_pred EEE
Confidence 543
No 177
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.43 E-value=2.6e-13 Score=119.94 Aligned_cols=107 Identities=19% Similarity=0.123 Sum_probs=84.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC----C-C
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----E-T 228 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~-~ 228 (348)
.++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..++++..+|+.+... . .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~ 131 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL-----NDRVEVRTGLALDSLQQIENEKY 131 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTTC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcCC
Confidence 3567999999999999999997753 3799999999999999998876543 3468999998865321 1 1
Q ss_pred CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
++||+|++..... ....+++.+.++|+|||++++.+...
T Consensus 132 ~~fD~v~~d~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 132 EPFDFIFIDADKQ-----NNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp CCCSEEEECSCGG-----GHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred CCcCEEEEcCCcH-----HHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 5799999865532 56789999999999999888876543
No 178
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.43 E-value=1.3e-13 Score=121.84 Aligned_cols=106 Identities=13% Similarity=0.123 Sum_probs=84.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CC----C
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PE----T 228 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~----~ 228 (348)
++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..++++.++|+.+.. .. .
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL-----SDKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHTTTCT
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC-----CCceEEEeCCHHHHHHHhhhccCC
Confidence 457999999999999999987643 3799999999999999999876543 346899999885532 11 1
Q ss_pred CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
++||+|++.... .+...+++.+.++|||||+|++.+...
T Consensus 139 ~~fD~v~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 139 WQYDLIYIDADK-----ANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp TCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred CCccEEEECCCH-----HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 689999965532 357789999999999999999977554
No 179
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.41 E-value=6.5e-14 Score=118.02 Aligned_cols=103 Identities=17% Similarity=0.255 Sum_probs=81.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC----CCCcee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD 232 (348)
++.+|||+|||+|.++..++..+.. |+++|+|+.+++.|++++...+ .++++.+.|+.+... ..++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTG-------LGARVVALPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHT-------CCCEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcC-------CceEEEeccHHHHHHhhhccCCceE
Confidence 5679999999999999999988776 9999999999999999876432 158888888876321 124799
Q ss_pred EEeechhhhcCChhhHHHHHHHHH--HcCCCCcEEEEEecc
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAK--VGLKPGGFFVLKENI 271 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~--~~LkpgG~lii~~~~ 271 (348)
+|+++.+++ . +...+++.+. ++|+|||.+++....
T Consensus 113 ~i~~~~~~~--~--~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 113 VAFMAPPYA--M--DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEEECCCTT--S--CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred EEEECCCCc--h--hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 999998776 2 3345566666 999999999997644
No 180
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.41 E-value=7e-14 Score=125.87 Aligned_cols=106 Identities=11% Similarity=0.155 Sum_probs=85.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC------C
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------T 228 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~------~ 228 (348)
++.+|||||||+|..+..++.... ..|+++|+|+.+++.|++++...++ ..++++..+|+.+.... .
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ-----EHKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHHHCS
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHhhccCC
Confidence 457999999999999999987643 3799999999999999999876544 35799999998664321 3
Q ss_pred CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
++||+|++... ..+...+++.+.++|||||+|++.+...
T Consensus 135 ~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 135 HQFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp SCEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred CCEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 78999998654 2367789999999999999999976544
No 181
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.41 E-value=1.9e-12 Score=123.83 Aligned_cols=148 Identities=17% Similarity=0.131 Sum_probs=110.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.++.+|||+|||+|.++..++..+.. .|+|+|+|+.|++.|++++...++ ..++++.+.|+.+++.++++||+|
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl-----~~~i~~~~~D~~~~~~~~~~fD~I 290 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV-----LDKIKFIQGDATQLSQYVDSVDFA 290 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC-----GGGCEEEECCGGGGGGTCSCEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhhCCcccCCcCEE
Confidence 46779999999999999999877663 699999999999999999876543 357999999999988766899999
Q ss_pred eechhhhcCC-----hhh-HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee
Q 018970 235 WVQWCIGHLT-----DDD-FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD 308 (348)
Q Consensus 235 i~~~~l~~~~-----~~d-~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~ 308 (348)
+++..++.-. ..+ ...+++.+.++| ||.+++.. .+.+.+.+.+++.||++.....
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~-----------------~~~~~~~~~~~~~G~~~~~~~~ 351 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT-----------------TEKKAIEEAIAENGFEIIHHRV 351 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEE-----------------SCHHHHHHHHHHTTEEEEEEEE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE-----------------CCHHHHHHHHHHcCCEEEEEEE
Confidence 9987654321 012 367889999988 45444443 1456788899999999887554
Q ss_pred cCCCCccceEEEEEEEeecCCC
Q 018970 309 QKGLPEELFAVKMYALTAEMPR 330 (348)
Q Consensus 309 ~~~~~~~l~~v~~~~l~~~~~~ 330 (348)
.. .....+.+|--+|..+.
T Consensus 352 ~~---nG~l~~~~~~~~~~~~~ 370 (373)
T 3tm4_A 352 IG---HGGLMVHLYVVKLEHHH 370 (373)
T ss_dssp EE---ETTEEEEEEEEEETTCC
T ss_pred EE---cCCEEEEEEeccCccCC
Confidence 32 23457777766655443
No 182
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.41 E-value=3.5e-13 Score=120.06 Aligned_cols=106 Identities=13% Similarity=0.210 Sum_probs=86.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-CCC--CCce
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPE--TGRY 231 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~--~~~f 231 (348)
.++.+|||+|||+|..+..++...+ ..|+++|+|+.+++.|++++...++ ..++.+...|+.+. +.. +++|
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~f 127 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL-----ESRIELLFGDALQLGEKLELYPLF 127 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGSHHHHTTSCCE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECCHHHHHHhcccCCCc
Confidence 3567999999999999999998753 3799999999999999998865433 34689999988774 211 3689
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
|+|++....+ +...+++.+.++|+|||.+++.+..
T Consensus 128 D~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 128 DVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp EEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred cEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 9999987754 5778999999999999999987543
No 183
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.41 E-value=7.2e-14 Score=140.83 Aligned_cols=107 Identities=17% Similarity=0.124 Sum_probs=87.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC--CCCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~fD~ 233 (348)
.++.+|||||||.|.++..|+..+.. |+|+|+|+.+|+.|+..+.+.+. .+++|.+.+++++ ..++++||+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~-V~giD~~~~~i~~a~~~a~~~~~------~~~~~~~~~~~~~~~~~~~~~fD~ 137 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGAT-IVGIDFQQENINVCRALAEENPD------FAAEFRVGRIEEVIAALEEGEFDL 137 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTSTT------SEEEEEECCHHHHHHHCCTTSCSE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCE-EEEECCCHHHHHHHHHHHHhcCC------CceEEEECCHHHHhhhccCCCccE
Confidence 45679999999999999999988875 99999999999999998765432 4699999999887 344579999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|+|..+++|+++.+....+..+.+.|+++|..++..
T Consensus 138 v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 138 AIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp EEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred EEECcchhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 999999999996443344566777888888766654
No 184
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.41 E-value=1.3e-12 Score=118.68 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=81.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.++.+|||||||+|.++..++... ...|+++|+|+.|++.|+++.. ++.+...|+.+++.++++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP-----------QVTFCVASSHRLPFSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTSCSBCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC-----------CcEEEEcchhhCCCCCCceeEE
Confidence 466799999999999999998764 2379999999999999998752 4788999999888777899999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
++..+. .+++++.++|||||.+++.....
T Consensus 153 ~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 153 IRIYAP---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp EEESCC---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred EEeCCh---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 986552 25789999999999999987544
No 185
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.40 E-value=9.7e-13 Score=122.97 Aligned_cols=135 Identities=15% Similarity=0.151 Sum_probs=99.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
+.++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++...++ .++.+.+.|+.+++...++||
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~------~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV------LNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC------CSEEEESSCGGGGGGGCCCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC------CeEEEEECChhhcccccccCC
Confidence 56778999999999999999997643 3799999999999999998865433 368899999888764346899
Q ss_pred EEeech------hhhcCCh-------hh-------HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHH
Q 018970 233 VIWVQW------CIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYF 292 (348)
Q Consensus 233 ~Ii~~~------~l~~~~~-------~d-------~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l 292 (348)
+|++.. ++++.++ ++ ...+++++.++|||||.++++.-.... .-+...+
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~-----------~Ene~~v 258 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP-----------EENEFVI 258 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG-----------GGTHHHH
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh-----------HHhHHHH
Confidence 999842 2333221 11 258999999999999999997632210 0134457
Q ss_pred HHHHHhcCCeEEEE
Q 018970 293 KELFSRCGLHIYKS 306 (348)
Q Consensus 293 ~~l~~~aGf~~v~~ 306 (348)
..++++.||+++..
T Consensus 259 ~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 259 QWALDNFDVELLPL 272 (315)
T ss_dssp HHHHHHSSEEEECC
T ss_pred HHHHhcCCCEEecC
Confidence 78888899887654
No 186
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.40 E-value=5.5e-13 Score=127.15 Aligned_cols=104 Identities=19% Similarity=0.208 Sum_probs=86.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
++.+|||||||+|.++...++.+...|+++|.|+ |++.|++.+...++ ..+++++..+++++..+ ++||+|++
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~-----~~~i~~i~~~~~~~~lp-e~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGL-----EDRVHVLPGPVETVELP-EQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCC-----CceEEEEeeeeeeecCC-ccccEEEe
Confidence 4678999999999999988877888899999996 89999998876655 56799999999998876 78999998
Q ss_pred chhhhcCCh-hhHHHHHHHHHHcCCCCcEEEE
Q 018970 237 QWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 237 ~~~l~~~~~-~d~~~~l~~~~~~LkpgG~lii 267 (348)
-+.-..+.. ..+..++....++|||||.++-
T Consensus 156 E~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 156 EWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 554333332 2578899999999999999875
No 187
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.40 E-value=7.9e-13 Score=128.14 Aligned_cols=114 Identities=13% Similarity=-0.019 Sum_probs=86.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHH-------HHHhCCCCCCCcCCCcceeEEEcCCCCC--
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAA-------RESLAPENHMAPDMHKATNFFCVPLQDF-- 224 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a-------~~~~~~~~~~~~~~~~~i~~~~~d~~~~-- 224 (348)
+.++.+|||||||+|.++..++.... ..|+|+|+|+.+++.| ++++...|+. ..++++..+|....
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~----~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR----LNNVEFSLKKSFVDNN 315 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC----CCCEEEEESSCSTTCH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC----CCceEEEEcCcccccc
Confidence 56788999999999999999987643 4799999999999988 7776554320 14688888753321
Q ss_pred CC--CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCC
Q 018970 225 TP--ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG 275 (348)
Q Consensus 225 ~~--~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~ 275 (348)
++ ..++||+|+++.++ +.+ ++..+|+++.++|||||.|++.+......
T Consensus 316 ~~~~~~~~FDvIvvn~~l-~~~--d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFL-FDE--DLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp HHHHHGGGCSEEEECCTT-CCH--HHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred ccccccCCCCEEEEeCcc-ccc--cHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 11 13689999987666 323 77889999999999999999987655433
No 188
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.39 E-value=3e-12 Score=111.59 Aligned_cols=126 Identities=16% Similarity=0.122 Sum_probs=97.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||+|||+|.++..++..+...|+++|+|+.+++.+++++...+ .++++.+.|+.+++ ++||+|
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~---~~~D~v 116 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK-------GKFKVFIGDVSEFN---SRVDIV 116 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT-------TSEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcC-------CCEEEEECchHHcC---CCCCEE
Confidence 34667999999999999999987766679999999999999999986532 26899999998874 589999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKS 306 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~ 306 (348)
+++..+++........+++.+.++| || +++..... ..+.+.+.+.+++.||++...
T Consensus 117 ~~~~p~~~~~~~~~~~~l~~~~~~l--~~-~~~~~~~~-------------~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 117 IMNPPFGSQRKHADRPFLLKAFEIS--DV-VYSIHLAK-------------PEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp EECCCCSSSSTTTTHHHHHHHHHHC--SE-EEEEEECC-------------HHHHHHHHHHHHHTTEEEEEE
T ss_pred EEcCCCccccCCchHHHHHHHHHhc--Cc-EEEEEeCC-------------cCCHHHHHHHHHHCCCeEEEE
Confidence 9999988876544567899999998 55 44332100 023455778899999987653
No 189
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.39 E-value=2.6e-12 Score=111.59 Aligned_cols=117 Identities=15% Similarity=0.244 Sum_probs=87.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++..+...|+++|+|+.|++.|++++. ++++.+.|+.+++ ++||+|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~---~~~D~v~ 115 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----------GVNFMVADVSEIS---GKYDTWI 115 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCGGGCC---CCEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----------CCEEEECcHHHCC---CCeeEEE
Confidence 4667999999999999999987755579999999999999999864 4789999998864 6899999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
++.+++++.+.....+++++.++| |+ +++..+. .+...+.+++++.| ++..
T Consensus 116 ~~~p~~~~~~~~~~~~l~~~~~~~--g~-~~~~~~~---------------~~~~~~~~~~~~~g-~~~~ 166 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFIDKAFETS--MW-IYSIGNA---------------KARDFLRREFSARG-DVFR 166 (200)
T ss_dssp ECCCC-------CHHHHHHHHHHE--EE-EEEEEEG---------------GGHHHHHHHHHHHE-EEEE
T ss_pred ECCCchhccCchhHHHHHHHHHhc--Cc-EEEEEcC---------------chHHHHHHHHHHCC-CEEE
Confidence 999999987544457899999998 44 4444321 12455788888888 6444
No 190
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.39 E-value=4.6e-12 Score=109.78 Aligned_cols=121 Identities=15% Similarity=0.171 Sum_probs=86.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC---CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~---~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
+.++.+|||+|||+|.++..++.... ..|+++|+|+.+ . ..++.+.+.|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~--------~~~v~~~~~d~~~~~~~~~~~ 82 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P--------IPNVYFIQGEIGKDNMNNIKN 82 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C--------CTTCEEEECCTTTTSSCCC--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C--------CCCceEEEccccchhhhhhcc
Confidence 35678999999999999999998764 379999999831 1 235888999988765
Q ss_pred -------------------CCCCceeEEeechhhhcCCh--hhH-------HHHHHHHHHcCCCCcEEEEEecccCCCce
Q 018970 226 -------------------PETGRYDVIWVQWCIGHLTD--DDF-------VSFFKRAKVGLKPGGFFVLKENIARSGFV 277 (348)
Q Consensus 226 -------------------~~~~~fD~Ii~~~~l~~~~~--~d~-------~~~l~~~~~~LkpgG~lii~~~~~~~~~~ 277 (348)
.++++||+|++..++++... .+. ..+++.+.++|||||.|++.....
T Consensus 83 ~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~----- 157 (201)
T 2plw_A 83 INYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG----- 157 (201)
T ss_dssp ---------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS-----
T ss_pred ccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC-----
Confidence 34568999999887766421 121 248899999999999999854211
Q ss_pred ecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 278 LDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 278 ~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
.+...+...++. .|..+...
T Consensus 158 ---------~~~~~l~~~l~~-~f~~v~~~ 177 (201)
T 2plw_A 158 ---------SQTNNLKTYLKG-MFQLVHTT 177 (201)
T ss_dssp ---------TTHHHHHHHHHT-TEEEEEEC
T ss_pred ---------CCHHHHHHHHHH-HHheEEEE
Confidence 123456666655 46655543
No 191
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.38 E-value=8.6e-13 Score=118.71 Aligned_cols=115 Identities=12% Similarity=0.119 Sum_probs=82.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcC--CCcceeEEEcCCCC-CC--CCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPD--MHKATNFFCVPLQD-FT--PET 228 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~--~~~~i~~~~~d~~~-~~--~~~ 228 (348)
..++.+|||||||+|.++..++..++. .|+++|+|+.+++.|++++......... -..++.+.++|+.+ ++ ++.
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 346679999999999999999988765 7999999999999998876431000000 02468999999987 44 456
Q ss_pred CceeEEeechhhhcCChh------hHHHHHHHHHHcCCCCcEEEEEe
Q 018970 229 GRYDVIWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~~~------d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+++|.|++...-.+.... -...+++++.++|+|||.|++..
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 789999854321111000 01479999999999999999964
No 192
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.38 E-value=1.7e-12 Score=120.03 Aligned_cols=113 Identities=18% Similarity=0.234 Sum_probs=80.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~ 233 (348)
.++.+|||||||+|.++..++... ..+|+++|+|+.+++.|++++...+.. .-...++++..+|+.++. ...++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAG-SYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSS-CTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccc-cccCCceEEEEChHHHHHhhcCCCccE
Confidence 456799999999999999998653 347999999999999999986431000 000247899999987754 33578999
Q ss_pred EeechhhhcCChhhH--HHHHHHHHHcCCCCcEEEEEe
Q 018970 234 IWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~--~~~l~~~~~~LkpgG~lii~~ 269 (348)
|++.......+...+ ..+++.+.++|+|||++++..
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999655433332222 689999999999999999864
No 193
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.38 E-value=1.2e-12 Score=116.92 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=82.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC-CCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fD~ 233 (348)
..++.+|||||||+|.++..++..+...|+++|+|+.+++.|++++...++ .++.+...|+. .+.+ .+.||+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~-~~~~~~~~fD~ 161 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV------KNVHVILGDGS-KGFPPKAPYDV 161 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGG-GCCGGGCCEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC------CCcEEEECCcc-cCCCCCCCccE
Confidence 467789999999999999999877635699999999999999998765432 35888888862 2222 245999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
|++..+++++. +++.++|+|||.+++....
T Consensus 162 Ii~~~~~~~~~--------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 162 IIVTAGAPKIP--------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EEECSBBSSCC--------HHHHHTEEEEEEEEEEECS
T ss_pred EEECCcHHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 99999999887 2678999999999998653
No 194
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.38 E-value=5.2e-13 Score=116.99 Aligned_cols=104 Identities=12% Similarity=0.148 Sum_probs=82.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-CCCCCceeE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~ 233 (348)
++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..++++..+|..+. +..++ ||+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL-----IDRVELQVGDPLGIAAGQRD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG-----GGGEEEEESCHHHHHTTCCS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CceEEEEEecHHHHhccCCC-CCE
Confidence 456999999999999999987643 3799999999999999988765332 34689999988653 33336 999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
|++.... .+...+++.+.++|||||.+++.+..
T Consensus 130 v~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 130 LFMDCDV-----FNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp EEEETTT-----SCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred EEEcCCh-----hhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 9987432 26778999999999999999886543
No 195
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.37 E-value=1.3e-12 Score=119.32 Aligned_cols=127 Identities=15% Similarity=0.064 Sum_probs=96.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-C-CCcEEEEcCCHHHHHHHHHHhCCC-C-CCCcCCCcceeEEEcCCCCCCCCCCc
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPE-N-HMAPDMHKATNFFCVPLQDFTPETGR 230 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~-~~~v~~vD~S~~~l~~a~~~~~~~-~-~~~~~~~~~i~~~~~d~~~~~~~~~~ 230 (348)
+.++.+|||+|||+|.++..++.. + ...|+++|+|+.+++.|++++... + + ..++++...|+.+.+.++++
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~-----~~~v~~~~~d~~~~~~~~~~ 171 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP-----PDNWRLVVSDLADSELPDGS 171 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC-----CTTEEEECSCGGGCCCCTTC
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-----CCcEEEEECchHhcCCCCCc
Confidence 567789999999999999999875 2 237999999999999999987542 1 1 24689999999887666678
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHh-cCCeEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSR-CGLHIYKSK 307 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~-aGf~~v~~~ 307 (348)
||+|++ +++ ++..+++++.++|+|||.+++...... ....+.+.+++ .||..++..
T Consensus 172 ~D~v~~-----~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~--------------~~~~~~~~l~~~~~f~~~~~~ 228 (280)
T 1i9g_A 172 VDRAVL-----DML--APWEVLDAVSRLLVAGGVLMVYVATVT--------------QLSRIVEALRAKQCWTEPRAW 228 (280)
T ss_dssp EEEEEE-----ESS--CGGGGHHHHHHHEEEEEEEEEEESSHH--------------HHHHHHHHHHHHSSBCCCEEE
T ss_pred eeEEEE-----CCc--CHHHHHHHHHHhCCCCCEEEEEeCCHH--------------HHHHHHHHHHhcCCcCCcEEE
Confidence 999998 334 445799999999999999999874321 12234455555 778765543
No 196
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.37 E-value=6.4e-13 Score=118.91 Aligned_cols=107 Identities=9% Similarity=0.089 Sum_probs=84.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-C-------
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T------- 225 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~------- 225 (348)
.++.+|||||||+|..+..++.... ..|+++|+|+.+++.|++++...++ ..++.+..+|+.+. +
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~~~~~~~~~~ 133 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL-----ENKIFLKLGSALETLQVLIDSKS 133 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHCSS
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHHHHHHHHHhhcc
Confidence 3567999999999999999998753 3799999999999999998865433 34588998887552 1
Q ss_pred -------CC-C-CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 226 -------PE-T-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 226 -------~~-~-~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
++ . ++||+|++..... +...+++.+.++|+|||++++.+...
T Consensus 134 ~~~~~~~f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 134 APSWASDFAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp CCGGGTTTCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred cccccccccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 11 1 6899999875433 56789999999999999999876443
No 197
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.36 E-value=4.2e-13 Score=127.82 Aligned_cols=141 Identities=13% Similarity=0.099 Sum_probs=95.5
Q ss_pred HHHHHHHHhhhcCCccCCCCCcEEEEecc------ccHHHHHHHHhC-CC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCC
Q 018970 139 EAFLQMLLSDRFPNARNNQHLVALDCGSG------IGRITKNLLIRY-FN-EVDLLEPVSHFLDAARESLAPENHMAPDM 210 (348)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDvGcG------~G~~~~~la~~~-~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~ 210 (348)
..++..++... ..++.+||||||| +|..+..++.+. +. .|+++|+|+.|. . .
T Consensus 203 ~~~Ye~lL~~l-----~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-~-------- 262 (419)
T 3sso_A 203 TPHYDRHFRDY-----RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-D-------- 262 (419)
T ss_dssp HHHHHHHHGGG-----TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-C--------
T ss_pred HHHHHHHHHhh-----cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-c--------
Confidence 34555555432 2456799999999 777777777663 22 799999999983 1 1
Q ss_pred CcceeEEEcCCCCCCCC------CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCC--
Q 018970 211 HKATNFFCVPLQDFTPE------TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKED-- 282 (348)
Q Consensus 211 ~~~i~~~~~d~~~~~~~------~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~-- 282 (348)
..+++|.++|+.++++. +++||+|++..+ |++. +...+|+++.++|||||++++.+........++...
T Consensus 263 ~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~--d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~ 339 (419)
T 3sso_A 263 ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HINA--HVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADP 339 (419)
T ss_dssp BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCHH--HHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSST
T ss_pred CCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccch--hHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccC
Confidence 35799999999987654 579999998754 5544 788999999999999999999886532221121111
Q ss_pred -CceecCHHHHHHHHHhcCCe
Q 018970 283 -RSITRSDFYFKELFSRCGLH 302 (348)
Q Consensus 283 -~~~~~s~~~l~~l~~~aGf~ 302 (348)
.......+.+++++......
T Consensus 340 ~~~~~tii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 340 QECSGTSLGLLKSLIDAIQHQ 360 (419)
T ss_dssp TCCTTSHHHHHHHHHHHHTGG
T ss_pred CcchhHHHHHHHHHHHHhccc
Confidence 01111234566677665544
No 198
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.36 E-value=8.7e-13 Score=119.03 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=84.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-C-C-----C
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-P-----E 227 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~ 227 (348)
++.+|||||||+|..+..++.... ..|+++|+|+.+++.|++++...++ ..++++..+|+.+. + . .
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV-----DHKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHSGGG
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHHHHHHhccCC
Confidence 456999999999999999998754 3799999999999999998876543 35799999988653 2 1 1
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
.++||+|++.... .+...+++.+.++|||||+|++.+...
T Consensus 154 ~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 154 HGSYDFIFVDADK-----DNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp TTCBSEEEECSCS-----TTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred CCCEEEEEEcCch-----HHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 4789999986431 257789999999999999998865443
No 199
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.35 E-value=3.4e-12 Score=114.27 Aligned_cols=103 Identities=22% Similarity=0.284 Sum_probs=84.7
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||+|||+|.++..++.. ...|+++|+|+.+++.|+++....++ ..++++...|+.+...+.++||+|
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v 162 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNL-----GKNVKFFNVDFKDAEVPEGIFHAA 162 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTC-----CTTEEEECSCTTTSCCCTTCBSEE
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCC-----CCcEEEEEcChhhcccCCCcccEE
Confidence 467789999999999999999987 45799999999999999998765432 356889999988765344689999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
++. .+ +...+++.+.++|+|||.+++...
T Consensus 163 ~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 163 FVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp EEC-----SS--CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred EEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 973 33 456789999999999999999874
No 200
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.35 E-value=5.3e-12 Score=115.57 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=102.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||+|||+|.++..++..+...|+++|+|+.+++.+++++...++ ..++++++.|..++... +.||.|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v-----~~~v~~~~~D~~~~~~~-~~~D~V 196 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFPGE-NIADRI 196 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCCCC-SCEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEeCcHHHhccc-cCCCEE
Confidence 357789999999999999999988776899999999999999999876655 45689999999988754 789999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
+++.... ...++..+.++|||||+|.+.++...... .....+.+.++.+..|+++..
T Consensus 197 i~~~p~~------~~~~l~~a~~~lk~gG~ih~~~~~~e~~~--------~~~~~e~i~~~~~~~g~~v~~ 253 (278)
T 3k6r_A 197 LMGYVVR------THEFIPKALSIAKDGAIIHYHNTVPEKLM--------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp EECCCSS------GGGGHHHHHHHEEEEEEEEEEEEEEGGGT--------TTTTHHHHHHHHHHTTCEEEE
T ss_pred EECCCCc------HHHHHHHHHHHcCCCCEEEEEeeeccccc--------chhHHHHHHHHHHHcCCcEEE
Confidence 9864422 23578888899999999988764432111 112446688889999998643
No 201
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.35 E-value=9.2e-13 Score=116.67 Aligned_cols=107 Identities=20% Similarity=0.181 Sum_probs=83.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC------CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~------~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--- 225 (348)
+.++.+|||||||+|.++..++.... ..|+++|+|+.+++.|++++...++.... ..++++...|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLK-IDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGS-STTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccc-cCCEEEEECChHhccccc
Confidence 45678999999999999999987754 27999999999999999987543210000 136889999987754
Q ss_pred -CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
...++||+|++..+++++. +.+.++|||||.+++...
T Consensus 157 ~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEc
Confidence 3447899999999888754 678899999999999754
No 202
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.34 E-value=2.1e-12 Score=115.78 Aligned_cols=154 Identities=10% Similarity=-0.012 Sum_probs=109.6
Q ss_pred hhhhHHHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcc
Q 018970 135 IKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKA 213 (348)
Q Consensus 135 ~~~~~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~ 213 (348)
++..+.++..++.. +.++.+|||||||+|-++..++...+. .|+++|+++.|++.+++++...| ..
T Consensus 116 Lp~lD~fY~~i~~~------i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-------~~ 182 (281)
T 3lcv_B 116 LPHLDEFYRELFRH------LPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN-------VP 182 (281)
T ss_dssp GGGHHHHHHHHGGG------SCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-------CC
T ss_pred hHhHHHHHHHHHhc------cCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-------CC
Confidence 34444555554443 345779999999999999998866444 89999999999999999986643 34
Q ss_pred eeEEEcCCCCCCCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHH
Q 018970 214 TNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFK 293 (348)
Q Consensus 214 i~~~~~d~~~~~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~ 293 (348)
..+...|+..-+++ +.||+|++.-+++|+.+......+ ++.+.|+|+|.++-.+.-.-.+ ........-.+.|+
T Consensus 183 ~~~~v~D~~~~~p~-~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~G----rs~gm~~~Y~~~~e 256 (281)
T 3lcv_B 183 HRTNVADLLEDRLD-EPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQ----RSKGMFQNYSQSFE 256 (281)
T ss_dssp EEEEECCTTTSCCC-SCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-----------CHHHHHHHHHH
T ss_pred ceEEEeeecccCCC-CCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcC----CCcchhhHHHHHHH
Confidence 77888888766544 789999999999999865544566 8999999999988766411111 01111112345688
Q ss_pred HHHHhcCCeEEEEe
Q 018970 294 ELFSRCGLHIYKSK 307 (348)
Q Consensus 294 ~l~~~aGf~~v~~~ 307 (348)
+.+.+.|..+-...
T Consensus 257 ~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 257 SQARERSCRIQRLE 270 (281)
T ss_dssp HHHHHHTCCEEEEE
T ss_pred HHHHhcCCceeeee
Confidence 88888999654433
No 203
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.34 E-value=1.4e-12 Score=115.37 Aligned_cols=107 Identities=20% Similarity=0.197 Sum_probs=83.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-C-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
+.++.+|||+|||+|.++..++... . .+|+++|+|+.+++.+++++...+..... ..++.+...|+.......++||
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLS-SGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHH-TSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccC-CCcEEEEECCcccCcccCCCcC
Confidence 4567899999999999999998763 3 37999999999999999887542110000 1368899999876554457899
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+|++..+++++. +++.++|||||.+++...
T Consensus 154 ~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 154 AIHVGAAAPVVP--------QALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEECSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHHH--------HHHHHhcCCCcEEEEEEe
Confidence 999998887765 478899999999999764
No 204
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.34 E-value=1.9e-12 Score=120.43 Aligned_cols=105 Identities=20% Similarity=0.243 Sum_probs=82.1
Q ss_pred CcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CCCCceeEEe
Q 018970 159 LVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDVIW 235 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~fD~Ii 235 (348)
.+|||||||+|.++..+++..+. +|+++|+++.|++.|++++... ...+++++..|..++. .+.++||+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~------~~~rv~v~~~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP------RAPRVKIRVDDARMVAESFTPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC------CTTTEEEEESCHHHHHHTCCTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc------CCCceEEEECcHHHHHhhccCCCCCEEE
Confidence 48999999999999999975543 7999999999999999998642 1357899999987652 2347899999
Q ss_pred echhhhcCChhh--HHHHHHHHHHcCCCCcEEEEEe
Q 018970 236 VQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 236 ~~~~l~~~~~~d--~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+....+...... ...+++.++++|+|||+|++..
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 864433222112 2689999999999999998865
No 205
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.33 E-value=1.2e-11 Score=118.31 Aligned_cols=127 Identities=10% Similarity=0.039 Sum_probs=97.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CCC-CCCceeE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTP-ETGRYDV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~-~~~~fD~ 233 (348)
++.+|||+| |+|.++..++..++ ..|+++|+|+.|++.|++++...++ . ++++..+|+.+ ++. .+++||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~-----~-~v~~~~~D~~~~l~~~~~~~fD~ 244 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY-----E-DIEIFTFDLRKPLPDYALHKFDT 244 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC-----C-CEEEECCCTTSCCCTTTSSCBSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----C-CEEEEEChhhhhchhhccCCccE
Confidence 567999999 99999999988776 4899999999999999999865433 2 68999999988 653 2468999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEE-EEEecccCCCceecCCCCceecCH---HHHHHHHH-hcCCeEEEE
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFF-VLKENIARSGFVLDKEDRSITRSD---FYFKELFS-RCGLHIYKS 306 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~l-ii~~~~~~~~~~~d~~~~~~~~s~---~~l~~l~~-~aGf~~v~~ 306 (348)
|+++.+++.. ....+++++.++|||||.+ ++..... ..+. ..+.+++. +.||.+...
T Consensus 245 Vi~~~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~~g~~~~~~ 306 (373)
T 2qm3_A 245 FITDPPETLE---AIRAFVGRGIATLKGPRCAGYFGITRR-------------ESSLDKWREIQKLLLNEFNVVITDI 306 (373)
T ss_dssp EEECCCSSHH---HHHHHHHHHHHTBCSTTCEEEEEECTT-------------TCCHHHHHHHHHHHHHTSCCEEEEE
T ss_pred EEECCCCchH---HHHHHHHHHHHHcccCCeEEEEEEecC-------------cCCHHHHHHHHHHHHHhcCcchhhh
Confidence 9998766543 2578999999999999954 4443210 0123 45677787 899987553
No 206
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.33 E-value=2e-12 Score=115.35 Aligned_cols=106 Identities=11% Similarity=0.135 Sum_probs=83.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC----CCCC--
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPET-- 228 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~~~-- 228 (348)
++.+|||||||+|..+..++.... ..|+++|+|+.+++.|++++...++ ..++++...|+.+. +..+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV-----AEKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHHHHHHTSSSC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 456999999999999999987654 2799999999999999998765433 34689999886542 2222
Q ss_pred CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
++||+|++.... .+...+++.+.++|+|||+|++.+...
T Consensus 147 ~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 147 PEFDLIFIDADK-----RNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp CCEEEEEECSCG-----GGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred CCcCEEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 689999986542 367789999999999999999876544
No 207
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=1.6e-12 Score=119.00 Aligned_cols=105 Identities=18% Similarity=0.108 Sum_probs=86.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||+|||+|.++..++.... ..|+++|+|+.+++.|++++...++ .++.+.++|+.+++ ..++||+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l------~~~~~~~~d~~~~~-~~~~~D~ 189 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL------NNVIPILADNRDVE-LKDVADR 189 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC------SSEEEEESCGGGCC-CTTCEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEECChHHcC-ccCCceE
Confidence 45678999999999999999998753 3799999999999999998865433 35789999998883 3568999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
|++.... +...+++.+.+.|+|||+++++....
T Consensus 190 Vi~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 190 VIMGYVH------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECCcc------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 9987654 34578999999999999999987543
No 208
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.32 E-value=1.8e-12 Score=114.89 Aligned_cols=107 Identities=19% Similarity=0.191 Sum_probs=84.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--C--C--
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P--E-- 227 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~--~-- 227 (348)
.++.+|||||||+|..+..++.... ..|+++|+|+.+++.|++++...++ ..++++...|+.+.. . .
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~~~~~~~~~~ 142 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA-----EHKIDLRLKPALETLDELLAAGE 142 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTTC
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CCeEEEEEcCHHHHHHHHHhcCC
Confidence 3567999999999999999987643 3799999999999999998865433 356899998875531 1 1
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
.++||+|++... ..+...+++.+.++|+|||.+++.+...
T Consensus 143 ~~~~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 143 AGTFDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp TTCEEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred CCCccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 168999998654 2256789999999999999999876443
No 209
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.32 E-value=1.2e-12 Score=116.25 Aligned_cols=107 Identities=15% Similarity=0.114 Sum_probs=82.0
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-------CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE 227 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-------~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 227 (348)
+.++.+|||||||+|.++..++.... ..|+++|+|+.+++.|++++...++... ...++++...|+.+....
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSML-DSGQLLIVEGDGRKGYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHH-HHTSEEEEESCGGGCCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcccc-CCCceEEEECCcccCCCc
Confidence 45678999999999999999887532 3799999999999999988654210000 013588999998762222
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.++||+|++..+++++. +++.++|||||.+++...
T Consensus 161 ~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 161 NAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp GCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 36899999999998876 578999999999999764
No 210
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.31 E-value=9.2e-13 Score=120.12 Aligned_cols=105 Identities=15% Similarity=0.038 Sum_probs=75.0
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEE--EcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~fD 232 (348)
+.++.+|||||||+|.++..+++. ..|+++|+|+ |+..+++.. ........++.+. ++|+.+++ +++||
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~----~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVP----RITESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCC----CCCCBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhh----hhhhccCCCeEEEecccCHhHCC--CCCCc
Confidence 467789999999999999988866 4699999998 643222110 0000112268888 88998876 47899
Q ss_pred EEeechhhhcCChh---hH--HHHHHHHHHcCCCCc--EEEEEe
Q 018970 233 VIWVQWCIGHLTDD---DF--VSFFKRAKVGLKPGG--FFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~---d~--~~~l~~~~~~LkpgG--~lii~~ 269 (348)
+|+|..+ ++.... .. ..+|+.+.++||||| .|++..
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 9999877 443321 11 138899999999999 999865
No 211
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.31 E-value=2.6e-12 Score=115.14 Aligned_cols=106 Identities=11% Similarity=0.111 Sum_probs=84.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--C-----
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P----- 226 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~----- 226 (348)
.++.+|||||||+|..+..++...+ .+|+++|+|+.+++.|++++...++ ..++++..+|+.+.. .
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~~ 143 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV-----EHKINFIESDAMLALDNLLQGQE 143 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHSTT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhccC
Confidence 3457999999999999999998754 3799999999999999999876543 356899999876531 1
Q ss_pred CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
+.++||+|++... ..+...+++.+.++|+|||+|++.+..
T Consensus 144 ~~~~fD~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 144 SEGSYDFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp CTTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred CCCCcCEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 1478999997633 236788999999999999999876543
No 212
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.31 E-value=4.1e-12 Score=121.95 Aligned_cols=139 Identities=9% Similarity=0.048 Sum_probs=99.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCc-ceeEEEcCCCCCCC----CCCce
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTP----ETGRY 231 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~----~~~~f 231 (348)
++.+|||+|||+|.++..++..+...|+++|+|+.|++.|++++...++ .. +++|.++|+.++.. ...+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~-----~~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHL-----DMANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTC-----CCTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECCHHHHHHHHHHhCCCc
Confidence 4579999999999999999976766899999999999999999876543 22 68999999876321 23589
Q ss_pred eEEeechhh-----hcCCh--hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEE
Q 018970 232 DVIWVQWCI-----GHLTD--DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIY 304 (348)
Q Consensus 232 D~Ii~~~~l-----~~~~~--~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v 304 (348)
|+|++.... .+..+ .++..+++.+.++|+|||.+++..+...... ..-.+.+.+.+.++|.+++
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~---------~~~~~~i~~~~~~~g~~~~ 357 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTV---------SQFKKQIEKGFGKQKHTYL 357 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCH---------HHHHHHHHHHHTTCCCEEE
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH---------HHHHHHHHHHHHHcCCcEE
Confidence 999985443 22221 3466788899999999999999875432100 0012334556677899866
Q ss_pred EEeec
Q 018970 305 KSKDQ 309 (348)
Q Consensus 305 ~~~~~ 309 (348)
....+
T Consensus 358 ~~~~~ 362 (385)
T 2b78_A 358 DLQQL 362 (385)
T ss_dssp EEECC
T ss_pred EeCCC
Confidence 54443
No 213
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.30 E-value=2.7e-12 Score=115.03 Aligned_cols=122 Identities=12% Similarity=0.065 Sum_probs=90.7
Q ss_pred CCCcEEEEeccccHHHHHHHHh----CC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC---CC-C
Q 018970 157 QHLVALDCGSGIGRITKNLLIR----YF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TP-E 227 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~----~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~-~ 227 (348)
++.+|||||||+|..+..++.. +. .+|+++|+|+.|++.|+. . ..++++.++|+.+. +. .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-~----------~~~v~~~~gD~~~~~~l~~~~ 149 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-D----------MENITLHQGDCSDLTTFEHLR 149 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-G----------CTTEEEEECCSSCSGGGGGGS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-c----------CCceEEEECcchhHHHHHhhc
Confidence 3469999999999999999876 23 379999999999988762 1 24699999999885 42 2
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHH-cCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhc--CCeEE
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKV-GLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRC--GLHIY 304 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~-~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~a--Gf~~v 304 (348)
..+||+|++... |. +...+++++.+ +|||||+|++.+... . . ..++...+.+++++. +|.+.
T Consensus 150 ~~~fD~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d~~~---~--~-----~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 150 EMAHPLIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIEDMIP---Y--W-----YRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp SSCSSEEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECSCHH---H--H-----HHHCHHHHHHHHHTTTTTEEEE
T ss_pred cCCCCEEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEeCcc---c--c-----cccCHHHHHHHHHhCcccEEEc
Confidence 247999998665 32 56789999997 999999999976410 0 0 012345788888887 56654
No 214
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.29 E-value=1.5e-12 Score=119.76 Aligned_cols=113 Identities=15% Similarity=0.152 Sum_probs=81.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCC--CCC---CcCCCcceeEEEcCCCCCCCCCCc
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE--NHM---APDMHKATNFFCVPLQDFTPETGR 230 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~--~~~---~~~~~~~i~~~~~d~~~~~~~~~~ 230 (348)
.++.+|||||||+|.++..++.....+|+++|+|+.+++.|++++ .. ++. ......++++...|+.++...+++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 345799999999999999998773448999999999999999988 32 110 000135689999987553111468
Q ss_pred eeEEeechhhhcCChhh--HHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d--~~~~l~~~~~~LkpgG~lii~~ 269 (348)
||+|++....+..+... ...+++.+.++|+|||++++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999865532211122 2689999999999999999864
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.28 E-value=3.1e-12 Score=120.36 Aligned_cols=110 Identities=17% Similarity=0.219 Sum_probs=82.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCC--CCCCcCCCcceeEEEcCCCCCC--CCCCc
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDFT--PETGR 230 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~--~~~~~~~~~~i~~~~~d~~~~~--~~~~~ 230 (348)
.++.+|||||||+|.++..++.... .+|+++|+|+.+++.|++++... ++ ...++++..+|+.++. ...++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl----~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY----EDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----GSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc----CCCcEEEEECCHHHHHHhccCCC
Confidence 4567999999999999999986543 38999999999999999987421 11 0246899999976641 23478
Q ss_pred eeEEeechhhhcCChhh--HHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d--~~~~l~~~~~~LkpgG~lii~~ 269 (348)
||+|++..........+ ...+++.+.++|+|||+|++..
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99999864421111112 4689999999999999999863
No 216
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.27 E-value=2.1e-11 Score=115.19 Aligned_cols=155 Identities=12% Similarity=0.081 Sum_probs=106.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC------CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG 229 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~------~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 229 (348)
.++.+|||+|||+|.++..++.... ..++|+|+++.+++.|+.++...+ .++.+.++|...... .+
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-------~~~~i~~~D~l~~~~-~~ 200 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-------QKMTLLHQDGLANLL-VD 200 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-------CCCEEEESCTTSCCC-CC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-------CCceEEECCCCCccc-cC
Confidence 4567999999999999998887643 369999999999999998865432 247888888766432 36
Q ss_pred ceeEEeechhhhcCChhhH----------------HHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHH
Q 018970 230 RYDVIWVQWCIGHLTDDDF----------------VSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFK 293 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~----------------~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~ 293 (348)
+||+|+++..+++++.++. ..+++++.+.|+|||++++..+.. + +.. .....++
T Consensus 201 ~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~---~-~~~------~~~~~ir 270 (344)
T 2f8l_A 201 PVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA---M-FGT------SDFAKVD 270 (344)
T ss_dssp CEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG---G-GGS------TTHHHHH
T ss_pred CccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch---h-cCC------chHHHHH
Confidence 8999999999877653321 268999999999999998876322 1 111 1246688
Q ss_pred HHHHhcCCeEEEE-eecCCCCccceEEEEEEEeecC
Q 018970 294 ELFSRCGLHIYKS-KDQKGLPEELFAVKMYALTAEM 328 (348)
Q Consensus 294 ~l~~~aGf~~v~~-~~~~~~~~~l~~v~~~~l~~~~ 328 (348)
+.+.+.|+..... .....|...-.+..++.++..+
T Consensus 271 ~~l~~~~~~~~ii~lp~~~F~~~~~~~~i~vl~k~~ 306 (344)
T 2f8l_A 271 KFIKKNGHIEGIIKLPETLFKSEQARKSILILEKAD 306 (344)
T ss_dssp HHHHHHEEEEEEEECCGGGSCC-CCCEEEEEEEECC
T ss_pred HHHHhCCeEEEeeeCChhhccCCCCceEEEEEECCC
Confidence 8888877643111 1222344333455566666433
No 217
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.27 E-value=8.3e-12 Score=114.96 Aligned_cols=106 Identities=12% Similarity=0.023 Sum_probs=81.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCce---eE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY---DV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f---D~ 233 (348)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.|++++...++ ..+++|.+.|+.+.. + ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l-----~~~v~~~~~D~~~~~-~-~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGV-----SDRFFVRKGEFLEPF-K-EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTSEEEEESSTTGGG-G-GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECcchhhc-c-cccCCCCE
Confidence 4568999999999999999987222799999999999999999876543 235899999998732 2 578 99
Q ss_pred Eeechhhh-----------cCCh------hhHHHHHHHHH-HcCCCCcEEEEEe
Q 018970 234 IWVQWCIG-----------HLTD------DDFVSFFKRAK-VGLKPGGFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~-----------~~~~------~d~~~~l~~~~-~~LkpgG~lii~~ 269 (348)
|+++.... |-+. .+...+++++. +.|+|||++++..
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 99973222 2221 12237899999 9999999999853
No 218
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.27 E-value=3.6e-12 Score=116.87 Aligned_cols=109 Identities=17% Similarity=0.168 Sum_probs=82.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCC--CCCCcCCCcceeEEEcCCCCC-CCCCCcee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~--~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD 232 (348)
.+.+|||||||+|.++..++... ..+|+++|+++.+++.|++++... ++ ...++++...|+.++ ....++||
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~----~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL----DDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT----TSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc----CCCceEEEECcHHHHHhhCCCCee
Confidence 46799999999999999998663 358999999999999999987321 11 035789999998663 22347899
Q ss_pred EEeechhhhcCChhh--HHHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d--~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|++....+..+... ...+++.+.++|+|||++++..
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999965443222111 2579999999999999998874
No 219
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.27 E-value=4.8e-11 Score=116.80 Aligned_cols=134 Identities=10% Similarity=0.051 Sum_probs=99.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CCCCc
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGR 230 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~ 230 (348)
+.++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++...|+ .++.+.+.|+.+++ +++++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI------KIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCTTCCSSSSCSSC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC------CcEEEEEcChhhcchhhccCC
Confidence 56778999999999999999987643 3799999999999999999876443 36889999998876 33468
Q ss_pred eeEEee------chhhhcCChh-------hH-------HHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHH
Q 018970 231 YDVIWV------QWCIGHLTDD-------DF-------VSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDF 290 (348)
Q Consensus 231 fD~Ii~------~~~l~~~~~~-------d~-------~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~ 290 (348)
||+|++ ..++++.++. ++ ..+++++.++|||||.|++++-..... -+.+
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~-----------ene~ 399 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE-----------ENEK 399 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG-----------GTHH
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh-----------hHHH
Confidence 999996 3444444421 11 578999999999999999886322100 1344
Q ss_pred HHHHHHHhc-CCeEEE
Q 018970 291 YFKELFSRC-GLHIYK 305 (348)
Q Consensus 291 ~l~~l~~~a-Gf~~v~ 305 (348)
.+...+++. ||+++.
T Consensus 400 ~v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 400 NIRWFLNVHPEFKLVP 415 (450)
T ss_dssp HHHHHHHHCSSCEECC
T ss_pred HHHHHHHhCCCCEEee
Confidence 566777775 788654
No 220
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.26 E-value=6.9e-12 Score=114.14 Aligned_cols=100 Identities=15% Similarity=0.066 Sum_probs=79.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+.+|||||||+|.++..++... .+|+++|+++.|++.|++++.... ..-...++++..+|..++. ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~--~~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFH--EVKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHH--HHHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhc--cccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 45799999999999999998774 789999999999999988764310 0000246889989987765 68999998
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
. .+ ++..+++.+.++|+|||.+++..
T Consensus 146 d-----~~--dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 146 L-----QE--PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp S-----SC--CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred C-----CC--ChHHHHHHHHHhcCCCcEEEEEc
Confidence 6 23 33459999999999999999863
No 221
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.26 E-value=6.2e-12 Score=118.36 Aligned_cols=148 Identities=13% Similarity=0.005 Sum_probs=82.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-CC-CcEEEEcCCHHHHHHHHHHhCCCC----CCCc-CCCcceeEEEcCCCCC--C
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPEN----HMAP-DMHKATNFFCVPLQDF--T 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~~-~~v~~vD~S~~~l~~a~~~~~~~~----~~~~-~~~~~i~~~~~d~~~~--~ 225 (348)
+.++.+|||+|||+|.++..++.. ++ ..|+++|+|+.+++.|++++...+ +... ....++++...|+.+. +
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 567789999999999999999877 44 479999999999999999875311 0000 0124799999999886 3
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccC-------------CCce----ecCCCCcee--
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR-------------SGFV----LDKEDRSIT-- 286 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~-------------~~~~----~d~~~~~~~-- 286 (348)
.++++||+|++... +...+++.+.++|+|||.|++...... ..+. .......+.
T Consensus 183 ~~~~~fD~V~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~ 255 (336)
T 2b25_A 183 IKSLTFDAVALDML-------NPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALSCEKISEVIVRDWLVC 255 (336)
T ss_dssp -----EEEEEECSS-------STTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHTCCEEEEEEECCCCCCEEEC
T ss_pred cCCCCeeEEEECCC-------CHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcCCCcccceEEEecccceEEE
Confidence 44568999998532 223488999999999999998653221 1110 111111111
Q ss_pred ---cCHHHHHHHHHhcCCeEEEEeec
Q 018970 287 ---RSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 287 ---~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
.....+...++++||..++....
T Consensus 256 ~~~~~~g~y~~~l~~aGF~~v~~~~~ 281 (336)
T 2b25_A 256 LAKQKNGILAQKVESKINTDVQLDSQ 281 (336)
T ss_dssp C-------------------------
T ss_pred eecccccchhhhhccccccccccccc
Confidence 11226888999999998885544
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.26 E-value=4.2e-12 Score=116.87 Aligned_cols=112 Identities=21% Similarity=0.255 Sum_probs=84.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~ 233 (348)
.++.+|||||||+|.++..++... ..+|+++|+|+.+++.|++++...+.. -...++++...|+.++. ...++||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG--YEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG--GGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccc--cCCCcEEEEECChHHHHHhCCCCceE
Confidence 456799999999999999998654 348999999999999999988642100 00257899999886642 22478999
Q ss_pred EeechhhhcCChhhH--HHHHHHHHHcCCCCcEEEEEe
Q 018970 234 IWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~--~~~l~~~~~~LkpgG~lii~~ 269 (348)
|++....++.+...+ ..+++.+.++|+|||.+++..
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 998654333232233 689999999999999999874
No 223
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.26 E-value=3.7e-12 Score=116.74 Aligned_cols=105 Identities=11% Similarity=0.054 Sum_probs=75.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEE--EcCCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~fD 232 (348)
+.++.+|||+|||+|.++..+++. ..|+++|+|+ |+..+++.. ........++.+. ++|+.+++ +++||
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~----~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 150 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKP----RLVETFGWNLITFKSKVDVTKME--PFQAD 150 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCC----CCCCCTTGGGEEEECSCCGGGCC--CCCCS
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhch----hhhhhcCCCeEEEeccCcHhhCC--CCCcC
Confidence 467789999999999999998876 4699999998 643332211 0000112268888 88988876 47899
Q ss_pred EEeechhhhcCCh---hhH--HHHHHHHHHcCCCCc--EEEEEe
Q 018970 233 VIWVQWCIGHLTD---DDF--VSFFKRAKVGLKPGG--FFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~---~d~--~~~l~~~~~~LkpgG--~lii~~ 269 (348)
+|++..+ ++... +.. ..+++.+.++||||| .|++..
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 9999877 44321 111 147899999999999 998865
No 224
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.26 E-value=2.5e-12 Score=119.58 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=80.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCC--CCCCCcCCCcceeEEEcCCCCC-CCCCCce
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAP--ENHMAPDMHKATNFFCVPLQDF-TPETGRY 231 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~--~~~~~~~~~~~i~~~~~d~~~~-~~~~~~f 231 (348)
.++.+|||||||+|.++..++.... .+|+++|+|+.+++.|++++.. .++ ...++++...|+.++ +...++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~----~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY----SSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----GCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc----CCCcEEEEECcHHHHHhhCCCCc
Confidence 4557999999999999999986643 4899999999999999998643 111 024689999987653 2234789
Q ss_pred eEEeechhhhcCChh--hHHHHHHHHHHcCCCCcEEEEEe
Q 018970 232 DVIWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~--d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|+|++....+..+.. ....+++.+.++|+|||+|++..
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999986543322211 13578999999999999999865
No 225
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.26 E-value=6.1e-12 Score=121.17 Aligned_cols=110 Identities=13% Similarity=0.056 Sum_probs=86.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC----CCCcee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD 232 (348)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++...++ ..++++.+.|+.++.. ..++||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~-----~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV-----EDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CccceEEECCHHHHHHHHHhhCCCCC
Confidence 5679999999999999999977666899999999999999999876433 2378999999876532 246899
Q ss_pred EEeechhhhcCCh-------hhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 233 ~Ii~~~~l~~~~~-------~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
+|++......... .+...++..+.++|+|||.+++....
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9998644322111 35678999999999999999888643
No 226
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.25 E-value=4.5e-12 Score=118.37 Aligned_cols=110 Identities=15% Similarity=0.254 Sum_probs=83.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCC--CC-CCCcCCCcceeEEEcCCCCC-CCCCCc
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAP--EN-HMAPDMHKATNFFCVPLQDF-TPETGR 230 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~--~~-~~~~~~~~~i~~~~~d~~~~-~~~~~~ 230 (348)
.++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.|++++.. .+ + ...++++..+|+.++ +...++
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~----~~~~v~~~~~D~~~~l~~~~~~ 151 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAF----DDPRAVLVIDDARAYLERTEER 151 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG----GCTTEEEEESCHHHHHHHCCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccc----cCCceEEEEchHHHHHHhcCCC
Confidence 345799999999999999998653 34799999999999999998642 10 0 024689999998763 223478
Q ss_pred eeEEeechhhhc---CChhh--HHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGH---LTDDD--FVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~---~~~~d--~~~~l~~~~~~LkpgG~lii~~ 269 (348)
||+|++....+. .+... ...+++.+.++|+|||.+++..
T Consensus 152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 999999765543 11112 3689999999999999999864
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.25 E-value=3.9e-12 Score=118.78 Aligned_cols=111 Identities=20% Similarity=0.256 Sum_probs=79.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCC-CcceeEEEcCCCCC-CCCCCcee
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDM-HKATNFFCVPLQDF-TPETGRYD 232 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~-~~~i~~~~~d~~~~-~~~~~~fD 232 (348)
.++.+|||||||+|.++..++.... .+|+++|+|+.+++.|++++.... ... ..++++...|+.++ +...++||
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~---~~~~~~rv~~~~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMS---CGFSHPKLDLFCGDGFEFLKNHKNEFD 183 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTS---GGGGCTTEEEECSCHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhc---cccCCCCEEEEEChHHHHHHhcCCCce
Confidence 3457999999999999999986543 489999999999999999986420 001 34689999988663 22347899
Q ss_pred EEeechhhhcCChhhH--HHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~--~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|++...-+..+...+ ..+++.+.++|+|||++++..
T Consensus 184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 184 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 9998654222221222 689999999999999999875
No 228
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.25 E-value=8.7e-12 Score=128.28 Aligned_cols=130 Identities=15% Similarity=0.151 Sum_probs=97.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-CCCCCceeEEe
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~Ii 235 (348)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++...++. ..++++.+.|+.++ +...++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~----~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT----GRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----STTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ccceEEEecCHHHHHHhcCCCccEEE
Confidence 46799999999999999998877768999999999999999998765441 14689999998774 22347899999
Q ss_pred echhhh--------cCC-hhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 236 VQWCIG--------HLT-DDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 236 ~~~~l~--------~~~-~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
+..... .+. ..+...+++.+.++|+|||+|+++.+... +... .+.|++.|++...
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~-----------~~~~----~~~l~~~g~~~~~ 678 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG-----------FRMD----LDGLAKLGLKAQE 678 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTT-----------CCCC----HHHHHHTTEEEEE
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcc-----------cccC----HHHHHHcCCceee
Confidence 865321 011 13678899999999999999998875422 1111 4677888987544
No 229
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.24 E-value=1.8e-11 Score=108.71 Aligned_cols=103 Identities=12% Similarity=-0.060 Sum_probs=85.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||||||.|.++..++ ....|+++|+|+.|++.+++.+... +....+...|+..-+++ ++||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~-------g~~~~~~v~D~~~~~~~-~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREK-------DWDFTFALQDVLCAPPA-EAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHT-------TCEEEEEECCTTTSCCC-CBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhc-------CCCceEEEeecccCCCC-CCcchHH
Confidence 467899999999999999877 3447999999999999999987543 35678889998887766 6999999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+.-++||+.+......+ ++.+.|+++|.++-.+
T Consensus 174 llk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 174 IFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp EESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 99999999865444455 8888999998887766
No 230
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.24 E-value=5.9e-12 Score=115.26 Aligned_cols=135 Identities=11% Similarity=0.022 Sum_probs=96.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC----CC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ET 228 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~ 228 (348)
+.++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++...++ .++++.+.|+.+++. ..
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV------LNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCHHHHHHHHHHTT
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC------CcEEEEeCChHhcchhhhhcc
Confidence 46778999999999999999987532 4799999999999999998876543 368899999877643 24
Q ss_pred CceeEEeechhhhcC---C------h-------hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHH
Q 018970 229 GRYDVIWVQWCIGHL---T------D-------DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYF 292 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~---~------~-------~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l 292 (348)
++||+|++....... . . .....+++++.++|||||.++++....... -+.+.+
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~-----------ene~~v 223 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVE-----------ENEEVI 223 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTT-----------SSHHHH
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChH-----------HhHHHH
Confidence 689999986322110 0 0 245789999999999999999976322100 124455
Q ss_pred HHHHHh-cCCeEEEE
Q 018970 293 KELFSR-CGLHIYKS 306 (348)
Q Consensus 293 ~~l~~~-aGf~~v~~ 306 (348)
..++++ .+|+++..
T Consensus 224 ~~~l~~~~~~~~~~~ 238 (274)
T 3ajd_A 224 KYILQKRNDVELIII 238 (274)
T ss_dssp HHHHHHCSSEEEECC
T ss_pred HHHHHhCCCcEEecC
Confidence 666655 46776543
No 231
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.24 E-value=2e-11 Score=115.06 Aligned_cols=123 Identities=9% Similarity=0.032 Sum_probs=94.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++.. +. +...|+++|+|+.+++.|++++...++ ..++.+.++|+.++. ++||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l-----~~~v~~~~~D~~~~~---~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKL-----EHKIIPILSDVREVD---VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCC---CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECChHHhc---CCCcEEE
Confidence 4667999999999999999 76 555899999999999999999876543 346899999998876 6899999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhc-CCeEEEEeec
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRC-GLHIYKSKDQ 309 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~a-Gf~~v~~~~~ 309 (348)
+..... ...+++.+.++|+|||.+++.+.... .+.+.+.++++ |++++.....
T Consensus 264 ~dpP~~------~~~~l~~~~~~L~~gG~l~~~~~~~~---------------~~~~~~~l~~~~~~~i~~~~~v 317 (336)
T 2yx1_A 264 MNLPKF------AHKFIDKALDIVEEGGVIHYYTIGKD---------------FDKAIKLFEKKCDCEVLEKRIV 317 (336)
T ss_dssp ECCTTT------GGGGHHHHHHHEEEEEEEEEEEEESS---------------SHHHHHHHHHHSEEEEEEEEEE
T ss_pred ECCcHh------HHHHHHHHHHHcCCCCEEEEEEeecC---------------chHHHHHHHHhcCCcEEEEEEE
Confidence 864322 23788999999999999998764321 23455666666 7776654443
No 232
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.23 E-value=7e-12 Score=117.44 Aligned_cols=111 Identities=22% Similarity=0.276 Sum_probs=82.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCC-CcceeEEEcCCCCCC-CCCCcee
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDM-HKATNFFCVPLQDFT-PETGRYD 232 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~-~~~~~fD 232 (348)
.++.+|||||||+|.++..++... ..+|+++|+|+.+++.|++++.... ... ..++++...|+.++. ..+++||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~---~~~~~~~v~~~~~D~~~~l~~~~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS---CGYEDKRVNVFIEDASKFLENVTNTYD 191 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS---GGGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc---cccCCCcEEEEEccHHHHHhhcCCCce
Confidence 345799999999999999998653 3489999999999999999986420 001 246899999976632 2246899
Q ss_pred EEeechhhhcCChhhH--HHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~--~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|++...-..-+...+ ..+++.+.++|+|||++++..
T Consensus 192 vIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 192 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998653211111222 689999999999999999864
No 233
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.23 E-value=2.5e-11 Score=111.72 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=77.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..++.+|||||||+|.++..++..+. .|+++|+|+.|++.+++++...+. ..++++.++|+.+++.+ .||+|
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~D~~~~~~~--~fD~v 97 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPV-----ASKLQVLVGDVLKTDLP--FFDTC 97 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEESCTTTSCCC--CCSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEEcceecccch--hhcEE
Confidence 45678999999999999999998866 699999999999999998865432 25799999999887654 79999
Q ss_pred eechhhhcCChhhHHHHH--------------HHH--HHcCCCCcEEE
Q 018970 235 WVQWCIGHLTDDDFVSFF--------------KRA--KVGLKPGGFFV 266 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l--------------~~~--~~~LkpgG~li 266 (348)
+++..++..+ +-+..++ +++ .++|+|||.++
T Consensus 98 v~nlpy~~~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 98 VANLPYQISS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEECCGGGHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEecCcccch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 9975544322 1122222 222 35889999764
No 234
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.22 E-value=3.2e-11 Score=104.50 Aligned_cols=123 Identities=14% Similarity=0.033 Sum_probs=84.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC-------
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~------- 227 (348)
..++.+|||+|||+|.++..++++ ...|+++|+++.. . ..++++.++|+.+....
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~---------~--------~~~v~~~~~D~~~~~~~~~~~~~~ 84 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME---------E--------IAGVRFIRCDIFKETIFDDIDRAL 84 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC---------C--------CTTCEEEECCTTSSSHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc---------c--------CCCeEEEEccccCHHHHHHHHHHh
Confidence 457789999999999999999877 4479999998741 0 24689999999876411
Q ss_pred ----CCceeEEeechhhhcCC--------h-hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHH
Q 018970 228 ----TGRYDVIWVQWCIGHLT--------D-DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKE 294 (348)
Q Consensus 228 ----~~~fD~Ii~~~~l~~~~--------~-~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~ 294 (348)
.++||+|++........ . +....+++.+.++|||||.|++...... ....+..
T Consensus 85 ~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~--------------~~~~~~~ 150 (191)
T 3dou_A 85 REEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD--------------MTNDFIA 150 (191)
T ss_dssp HHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST--------------HHHHHHH
T ss_pred hcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC--------------CHHHHHH
Confidence 14899999865322111 0 1245789999999999999998763211 1234556
Q ss_pred HHHhcCCeEEEEeecC
Q 018970 295 LFSRCGLHIYKSKDQK 310 (348)
Q Consensus 295 l~~~aGf~~v~~~~~~ 310 (348)
.++. .|..+......
T Consensus 151 ~l~~-~F~~v~~~kP~ 165 (191)
T 3dou_A 151 IWRK-NFSSYKISKPP 165 (191)
T ss_dssp HHGG-GEEEEEEECC-
T ss_pred HHHH-hcCEEEEECCC
Confidence 6644 57766654433
No 235
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.21 E-value=5.7e-11 Score=114.14 Aligned_cols=107 Identities=11% Similarity=-0.037 Sum_probs=81.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCceeEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~I 234 (348)
.++.+|||+|||+|.++..++..+.. |+++|+|+.+++.|++++...++ ...+.+.|+.++. ...+.||+|
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~-------~~~~~~~D~~~~l~~~~~~fD~I 284 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGL-------RVDIRHGEALPTLRGLEGPFHHV 284 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTC-------CCEEEESCHHHHHHTCCCCEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCC-------CCcEEEccHHHHHHHhcCCCCEE
Confidence 35789999999999999999987776 99999999999999999865433 1346678876642 112459999
Q ss_pred eechhhhcCCh-------hhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 235 WVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 235 i~~~~l~~~~~-------~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
++......-.. .+...+++.+.++|+|||.|++...
T Consensus 285 i~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 285 LLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp EECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 98654311111 2457889999999999999997664
No 236
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.20 E-value=3.1e-11 Score=116.28 Aligned_cols=134 Identities=15% Similarity=0.073 Sum_probs=96.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC----CCCcee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD 232 (348)
++.+|||+|||+|.++..++..+...|+++|+|+.+++.|++++...++. ..++++.+.|+.++.. ...+||
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~----~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLD----LSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECCHHHHHHHHHhcCCCCC
Confidence 45799999999999999999877668999999999999999998654320 1268999999877532 136899
Q ss_pred EEeechhhhcC-----C--hhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeE
Q 018970 233 VIWVQWCIGHL-----T--DDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHI 303 (348)
Q Consensus 233 ~Ii~~~~l~~~-----~--~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~ 303 (348)
+|++....... . ......++..+.++|+|||+++++.+...... + .-.+.+.+.+.++|+.+
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~-------~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTS--D-------LFQKIIADAAIDAGRDV 364 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCH--H-------HHHHHHHHHHHHHTCCE
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH--H-------HHHHHHHHHHHHcCCeE
Confidence 99997543111 0 03678899999999999999999875322100 0 01234556777888543
No 237
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.20 E-value=1.3e-11 Score=114.41 Aligned_cols=109 Identities=17% Similarity=0.161 Sum_probs=79.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCC--CCCCCcCCCcceeEEEcCCCCC-CCCCCcee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAP--ENHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~--~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD 232 (348)
.+.+|||||||+|.++..++... ..+|+++|+|+.+++.|++++.. .++ ...++++...|+.++ +...++||
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~----~~~~v~~~~~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF----DDPRAEIVIANGAEYVRKFKNEFD 165 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG----GCTTEEEEESCHHHHGGGCSSCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc----CCCceEEEECcHHHHHhhCCCCce
Confidence 45799999999999999998663 34899999999999999998732 000 024689999987653 22346899
Q ss_pred EEeechhhhcCCh-h--hHHHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWVQWCIGHLTD-D--DFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~-~--d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|++...-+.+.. . ....+++.+.++|+|||++++..
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998543221111 0 12689999999999999999864
No 238
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.18 E-value=1.5e-11 Score=105.93 Aligned_cols=99 Identities=23% Similarity=0.272 Sum_probs=72.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC----------CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEE-EcCCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF----------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF-CVPLQD 223 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~----------~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~-~~d~~~ 223 (348)
+.++.+|||+|||+|.++..++.... ..|+++|+|+.+ . ..++.+. ..|+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~--------~~~~~~~~~~d~~~ 82 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P--------LEGATFLCPADVTD 82 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C--------CTTCEEECSCCTTS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c--------CCCCeEEEeccCCC
Confidence 45678999999999999999998743 479999999832 0 1347778 788765
Q ss_pred CC--------CCCCceeEEeechhhhc----CChhh-----HHHHHHHHHHcCCCCcEEEEEec
Q 018970 224 FT--------PETGRYDVIWVQWCIGH----LTDDD-----FVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 224 ~~--------~~~~~fD~Ii~~~~l~~----~~~~d-----~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.. .++++||+|++..+++. ..+.. ...+++++.++|||||.|++...
T Consensus 83 ~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 83 PRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 42 22358999998664442 22110 14789999999999999998763
No 239
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.18 E-value=1.8e-11 Score=117.31 Aligned_cols=108 Identities=20% Similarity=0.140 Sum_probs=85.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC----CCCcee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~fD 232 (348)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++...++ .++++.++|+.++.. ..++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~------~~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGL------GNVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTC------TTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC------CCceEEECCHHHHHHHHHhcCCCee
Confidence 5679999999999999999977 55799999999999999999865443 248899999877532 146899
Q ss_pred EEeechhhhcCCh-------hhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 233 ~Ii~~~~l~~~~~-------~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
+|++......... .+...++..+.++|+|||.+++....
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9998543321111 25678999999999999999998753
No 240
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.14 E-value=7.5e-11 Score=115.29 Aligned_cols=134 Identities=11% Similarity=0.049 Sum_probs=96.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-CCCce
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~f 231 (348)
+.++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++...|+ . +.+.+.|+.++.. ..++|
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~------~-v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA------P-LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC------C-CEEECSCHHHHHHHHCSCE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------e-EEEEECCHHHhhhhccccC
Confidence 56778999999999999999997744 3799999999999999999876543 2 7788888776541 24789
Q ss_pred eEEeec------hhhhcCCh-------hh-------HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHH
Q 018970 232 DVIWVQ------WCIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFY 291 (348)
Q Consensus 232 D~Ii~~------~~l~~~~~-------~d-------~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~ 291 (348)
|+|++. .++.+-++ ++ ...+++.+.++|||||.|+++.-.... .-+.+.
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~-----------eEne~v 240 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP-----------EENEGV 240 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG-----------GGTHHH
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch-----------hcCHHH
Confidence 999952 22332221 11 267899999999999999987522110 014455
Q ss_pred HHHHHHhc-CCeEEEE
Q 018970 292 FKELFSRC-GLHIYKS 306 (348)
Q Consensus 292 l~~l~~~a-Gf~~v~~ 306 (348)
+..++++. +|+++..
T Consensus 241 v~~~l~~~~~~~l~~~ 256 (464)
T 3m6w_A 241 VAHFLKAHPEFRLEDA 256 (464)
T ss_dssp HHHHHHHCTTEEEECC
T ss_pred HHHHHHHCCCcEEEec
Confidence 66777776 5776654
No 241
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.14 E-value=9.4e-11 Score=114.06 Aligned_cols=133 Identities=15% Similarity=0.086 Sum_probs=97.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CCCCce
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~f 231 (348)
+.++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++...++ ++.+.+.|+.+++ .+.++|
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-------~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-------KATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-------CCEEEECCTTCTHHHHTTCCE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-------CeEEEeCchhhchhhcccCCC
Confidence 46778999999999999999998765 3799999999999999998876432 4688899988765 344689
Q ss_pred eEEee------chhhhcCCh-------hhH-------HHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHH
Q 018970 232 DVIWV------QWCIGHLTD-------DDF-------VSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFY 291 (348)
Q Consensus 232 D~Ii~------~~~l~~~~~-------~d~-------~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~ 291 (348)
|+|++ ..++++.++ +++ ..+++++.++|||||.+++++-..... -....
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~-----------ene~~ 385 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE-----------ENSLQ 385 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG-----------GTHHH
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh-----------hHHHH
Confidence 99996 234444432 111 478999999999999999986322100 12345
Q ss_pred HHHHHHhc-CCeEEE
Q 018970 292 FKELFSRC-GLHIYK 305 (348)
Q Consensus 292 l~~l~~~a-Gf~~v~ 305 (348)
+...+++. +|+++.
T Consensus 386 v~~~l~~~~~~~~~~ 400 (429)
T 1sqg_A 386 IKAFLQRTADAELCE 400 (429)
T ss_dssp HHHHHHHCTTCEECS
T ss_pred HHHHHHhCCCCEEeC
Confidence 66666664 677654
No 242
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.12 E-value=7.5e-10 Score=107.79 Aligned_cols=133 Identities=15% Similarity=0.126 Sum_probs=97.0
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCCc
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~ 230 (348)
..++.+|||+|||+|.++..++.. ...|+++|+|+.+++.|++++...++ .+++|.+.|+.+.. ...++
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~------~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGL------QNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCTTSCCSSSGGGTTC
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEECCHHHHhhhhhhhcCC
Confidence 456679999999999999999876 44799999999999999998865432 37999999998732 23468
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeecC
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQK 310 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~ 310 (348)
||+|+++...... ..+++.+.+ ++|+++++++.+.. +...-...|.+.||.+.......
T Consensus 357 fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvsc~p~---------------tlard~~~l~~~Gy~~~~~~~~d 415 (433)
T 1uwv_A 357 FDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVSCNPA---------------TLARDSEALLKAGYTIARLAMLD 415 (433)
T ss_dssp CSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEESCHH---------------HHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEECChH---------------HHHhhHHHHHHCCcEEEEEEEec
Confidence 9999986554432 245555544 68999998876421 11112356677899998877666
Q ss_pred CCCcc
Q 018970 311 GLPEE 315 (348)
Q Consensus 311 ~~~~~ 315 (348)
.||..
T Consensus 416 ~Fp~t 420 (433)
T 1uwv_A 416 MFPHT 420 (433)
T ss_dssp CSTTS
T ss_pred cCCCC
Confidence 67653
No 243
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.12 E-value=1.5e-10 Score=113.99 Aligned_cols=107 Identities=14% Similarity=0.136 Sum_probs=83.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-CCCceeE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~fD~ 233 (348)
++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++...|+ .++.+.+.|+.+++. ..++||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~------~nv~~~~~D~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI------SNVALTHFDGRVFGAAVPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCCSTTHHHHSTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCCHHHhhhhccccCCE
Confidence 778999999999999999998743 3799999999999999999875443 368899999887653 3468999
Q ss_pred Eeec------hhhhcCCh-------hh-------HHHHHHHHHHcCCCCcEEEEEe
Q 018970 234 IWVQ------WCIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 234 Ii~~------~~l~~~~~-------~d-------~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|++. .++.+.++ ++ ...+|+++.++|||||.|++++
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9972 23333221 11 3478999999999999999875
No 244
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.12 E-value=1.9e-11 Score=113.68 Aligned_cols=103 Identities=10% Similarity=-0.006 Sum_probs=72.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcC----CHHHHHHHHHHhCCCCCCCcCCCcceeEEEc-CCCCCCCCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP----VSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETG 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~----S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~ 229 (348)
+.++.+|||||||+|.++..+++. ..|+++|+ ++.+++.+. ....+ ..++.+.+. |+.+++ .+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~------~~~v~~~~~~D~~~l~--~~ 147 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG------WNLVRLQSGVDVFFIP--PE 147 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT------GGGEEEECSCCTTTSC--CC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC------CCCeEEEeccccccCC--cC
Confidence 466789999999999999998876 36999999 565442110 01100 146888888 887765 36
Q ss_pred ceeEEeechhhh---cCChh-hHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCIG---HLTDD-DFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l~---~~~~~-d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+||+|+|..+++ +..+. ....+|+.+.++|||||.|++..
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 899999977653 22211 11258899999999999998854
No 245
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.11 E-value=9.5e-11 Score=114.39 Aligned_cols=135 Identities=12% Similarity=0.007 Sum_probs=97.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCce
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~f 231 (348)
+.++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++...|+ .++.+.+.|..++. ..+++|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~------~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV------SNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC------SSEEEECCCHHHHHHHHTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEeCCHHHhhhhccccC
Confidence 56788999999999999999987633 3799999999999999999876543 35788888877654 123789
Q ss_pred eEEeech------hhhcCCh-------h-------hHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHH
Q 018970 232 DVIWVQW------CIGHLTD-------D-------DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFY 291 (348)
Q Consensus 232 D~Ii~~~------~l~~~~~-------~-------d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~ 291 (348)
|+|++.. ++.+-++ + ....+++.+.++|||||.|++++-.... .-+.+.
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~-----------eEne~v 245 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP-----------EENEEI 245 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG-----------GGTHHH
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc-----------ccCHHH
Confidence 9999743 2222110 1 1237899999999999999987522110 024556
Q ss_pred HHHHHHhcCCeEEEE
Q 018970 292 FKELFSRCGLHIYKS 306 (348)
Q Consensus 292 l~~l~~~aGf~~v~~ 306 (348)
+..++++.||+++..
T Consensus 246 v~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 246 ISWLVENYPVTIEEI 260 (456)
T ss_dssp HHHHHHHSSEEEECC
T ss_pred HHHHHHhCCCEEEec
Confidence 778888888777654
No 246
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.11 E-value=3.9e-10 Score=108.90 Aligned_cols=143 Identities=15% Similarity=0.122 Sum_probs=97.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC--CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~--~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
.++.+|||+|||+|.++..++++. ...++|+|+++.+++.| .++++.+.|+.++... ++||+
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------~~~~~~~~D~~~~~~~-~~fD~ 101 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------PWAEGILADFLLWEPG-EAFDL 101 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------TTEEEEESCGGGCCCS-SCEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------CCCcEEeCChhhcCcc-CCCCE
Confidence 345699999999999999998763 34799999999998755 2478899998887543 68999
Q ss_pred Eeechhhhc----------CChhh-----------------HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCcee
Q 018970 234 IWVQWCIGH----------LTDDD-----------------FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSIT 286 (348)
Q Consensus 234 Ii~~~~l~~----------~~~~d-----------------~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~ 286 (348)
|+++..+.. +.++. ...+++++.++|+|||.+++..... +. . .
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~---~l-~------~ 171 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT---WL-V------L 171 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG---GG-T------C
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH---Hh-c------C
Confidence 999755432 22111 2267999999999999998875321 10 0 0
Q ss_pred cCHHHHHHHHHhcCCeEEEEeecCCCCccceEEEEEEEe
Q 018970 287 RSDFYFKELFSRCGLHIYKSKDQKGLPEELFAVKMYALT 325 (348)
Q Consensus 287 ~s~~~l~~l~~~aGf~~v~~~~~~~~~~~l~~v~~~~l~ 325 (348)
...+.+++.+.+.|+..+.... ..|+.......++.++
T Consensus 172 ~~~~~lr~~l~~~~~~~i~~l~-~~F~~~~~~~~il~~~ 209 (421)
T 2ih2_A 172 EDFALLREFLAREGKTSVYYLG-EVFPQKKVSAVVIRFQ 209 (421)
T ss_dssp GGGHHHHHHHHHHSEEEEEEEE-SCSTTCCCCEEEEEEE
T ss_pred ccHHHHHHHHHhcCCeEEEECC-CCCCCCCccEEEEEEE
Confidence 1235688888888873333323 4555544445555544
No 247
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.06 E-value=7e-10 Score=108.40 Aligned_cols=159 Identities=12% Similarity=0.069 Sum_probs=106.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC--------------CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY--------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~--------------~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d 220 (348)
+.++.+|||.|||+|.++..++... ...++|+|+++.+++.|+.++...++. ..+.++.++|
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~----~~~~~i~~gD 244 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG----TDRSPIVCED 244 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC----SSCCSEEECC
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC----cCCCCEeeCC
Confidence 4566799999999999998887542 236999999999999999876543321 0157788898
Q ss_pred CCCCCCCCCceeEEeechhhhcCChhh---------------HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCce
Q 018970 221 LQDFTPETGRYDVIWVQWCIGHLTDDD---------------FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSI 285 (348)
Q Consensus 221 ~~~~~~~~~~fD~Ii~~~~l~~~~~~d---------------~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~ 285 (348)
....+.. ++||+|+++..+.+....+ ...+++++.++|||||.+++..+.. ..+...
T Consensus 245 ~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~---~L~~~~---- 316 (445)
T 2okc_A 245 SLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN---VLFEAG---- 316 (445)
T ss_dssp TTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH---HHHCST----
T ss_pred CCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc---ccccCc----
Confidence 8776544 4899999998887654211 2478999999999999998875321 111100
Q ss_pred ecCHHHHHH-HHHhcCCeEEEEeecCCCCccceEEEEEEEeec
Q 018970 286 TRSDFYFKE-LFSRCGLHIYKSKDQKGLPEELFAVKMYALTAE 327 (348)
Q Consensus 286 ~~s~~~l~~-l~~~aGf~~v~~~~~~~~~~~l~~v~~~~l~~~ 327 (348)
....+++ +++..++..+.......|...-.++.++.++..
T Consensus 317 --~~~~iR~~L~~~~~l~~ii~lp~~~F~~t~v~t~Il~~~k~ 357 (445)
T 2okc_A 317 --AGETIRKRLLQDFNLHTILRLPTGIFYAQGVKANVLFFSKG 357 (445)
T ss_dssp --HHHHHHHHHHHHEEEEEEEECCSSSSSSTTCCEEEEEEEES
T ss_pred --HHHHHHHHHHhcCcEEEEEeCCCCCccCCCCCEEEEEEECC
Confidence 1234554 666766666554444445443445556555543
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.03 E-value=7.2e-10 Score=107.55 Aligned_cols=100 Identities=22% Similarity=0.235 Sum_probs=77.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.++.+|||+|||+|.++..++.... .|+++|+|+.|++.|++++...++ . ++|.++|+.++... +||+|+
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl------~-v~~~~~d~~~~~~~--~fD~Vv 358 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNV------D-AEFEVASDREVSVK--GFDTVI 358 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC------C-EEEEECCTTTCCCT--TCSEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC------c-EEEEECChHHcCcc--CCCEEE
Confidence 4567999999999999999987644 699999999999999998764322 2 88999999887533 899999
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+...-..+. ..+++.+. .|+|||.++++.+
T Consensus 359 ~dPPr~g~~----~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 359 VDPPRAGLH----PRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp ECCCTTCSC----HHHHHHHH-HHCCSEEEEEESC
T ss_pred EcCCccchH----HHHHHHHH-hcCCCcEEEEECC
Confidence 976543332 23555554 4899999999863
No 249
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.03 E-value=5.6e-10 Score=102.72 Aligned_cols=117 Identities=10% Similarity=0.005 Sum_probs=83.8
Q ss_pred CCCCCcEEEEec------cccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeE-EEcCCCCCC
Q 018970 155 NNQHLVALDCGS------GIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF-FCVPLQDFT 225 (348)
Q Consensus 155 ~~~~~~VLDvGc------G~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~-~~~d~~~~~ 225 (348)
+.++.+|||+|| |+|. ..++.... ..|+++|+|+. + .++++ .++|+.+++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v-----------~~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V-----------SDADSTLIGDCATVH 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B-----------CSSSEEEESCGGGCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C-----------CCCEEEEECccccCC
Confidence 677889999999 5576 33344433 37999999987 1 14778 999998876
Q ss_pred CCCCceeEEeechhhhc--------CC-hhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHH
Q 018970 226 PETGRYDVIWVQWCIGH--------LT-DDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELF 296 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~--------~~-~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~ 296 (348)
.+ ++||+|+++...+. .. .+....+++.+.++|||||.|++..... .....+.+++
T Consensus 120 ~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~--------------~~~~~l~~~l 184 (290)
T 2xyq_A 120 TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH--------------SWNADLYKLM 184 (290)
T ss_dssp CS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS--------------SCCHHHHHHH
T ss_pred cc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc--------------CCHHHHHHHH
Confidence 54 68999999754221 11 1235689999999999999999975321 1123688899
Q ss_pred HhcCCeEEEEe
Q 018970 297 SRCGLHIYKSK 307 (348)
Q Consensus 297 ~~aGf~~v~~~ 307 (348)
++.||..+...
T Consensus 185 ~~~GF~~v~~~ 195 (290)
T 2xyq_A 185 GHFSWWTAFVT 195 (290)
T ss_dssp TTEEEEEEEEE
T ss_pred HHcCCcEEEEE
Confidence 99999877665
No 250
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.02 E-value=1.3e-09 Score=97.95 Aligned_cols=76 Identities=21% Similarity=0.227 Sum_probs=61.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCC-CceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fD~ 233 (348)
..++.+|||||||+|.++..++..+. .|+++|+|+.|++.+++++.. ..++++.++|+.+++.+. ..| .
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~~-~ 97 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRCN-FVTAIEIDHKLCKTTENKLVD--------HDNFQVLNKDILQFKFPKNQSY-K 97 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSS-EEEEECSCHHHHHHHHHHTTT--------CCSEEEECCCGGGCCCCSSCCC-E
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcCC-eEEEEECCHHHHHHHHHhhcc--------CCCeEEEEChHHhCCcccCCCe-E
Confidence 46778999999999999999998874 699999999999999998864 246899999999887653 345 4
Q ss_pred Eeechhh
Q 018970 234 IWVQWCI 240 (348)
Q Consensus 234 Ii~~~~l 240 (348)
|+++..+
T Consensus 98 vv~nlPy 104 (244)
T 1qam_A 98 IFGNIPY 104 (244)
T ss_dssp EEEECCG
T ss_pred EEEeCCc
Confidence 5555444
No 251
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.02 E-value=4.9e-10 Score=103.80 Aligned_cols=79 Identities=15% Similarity=0.098 Sum_probs=60.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++..+. .|+++|+|+.|++.+++++...+ ..++++.++|+.+++. .+||+|
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~------~~~v~~~~~D~~~~~~--~~~D~V 110 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEG------YNNLEVYEGDAIKTVF--PKFDVC 110 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTT------CCCEEC----CCSSCC--CCCSEE
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcC------CCceEEEECchhhCCc--ccCCEE
Confidence 45678999999999999999987644 69999999999999999874322 1468899999988765 479999
Q ss_pred eechhhhc
Q 018970 235 WVQWCIGH 242 (348)
Q Consensus 235 i~~~~l~~ 242 (348)
+++...+.
T Consensus 111 v~n~py~~ 118 (299)
T 2h1r_A 111 TANIPYKI 118 (299)
T ss_dssp EEECCGGG
T ss_pred EEcCCccc
Confidence 99766553
No 252
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.02 E-value=3.9e-12 Score=114.45 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=77.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCC-CceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fD~ 233 (348)
..++.+|||+|||+|.++..++..+ ..|+++|+|+.|++.+++++.. ..++++.++|+.+++.+. ++| .
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~f-~ 96 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL--------NTRVTLIHQDILQFQFPNKQRY-K 96 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT--------CSEEEECCSCCTTTTCCCSSEE-E
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc--------CCceEEEECChhhcCcccCCCc-E
Confidence 4567899999999999999999887 5699999999999988877642 357899999999987653 678 6
Q ss_pred Eeechhhh-----------cCChhhHHHHH----HHHHHcCCCCcEEEEEe
Q 018970 234 IWVQWCIG-----------HLTDDDFVSFF----KRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~-----------~~~~~d~~~~l----~~~~~~LkpgG~lii~~ 269 (348)
|+++...+ |.. +...++ +.+.++|+|||.+.+..
T Consensus 97 vv~n~Py~~~~~~~~~~~~~~~--~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 97 IVGNIPYHLSTQIIKKVVFESR--ASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EEEECCSSSCHHHHHHHHHHCC--CEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EEEeCCccccHHHHHHHHhCCC--CCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 66653222 211 112334 66899999999877643
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.98 E-value=2.1e-09 Score=99.16 Aligned_cols=79 Identities=13% Similarity=0.042 Sum_probs=67.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||||||+|.++..++... ..|+++|+|+.|++.+++++.. ..++++.++|+.+++.+...||+|
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~--------~~~v~vi~gD~l~~~~~~~~fD~I 118 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKEL--------YNNIEIIWGDALKVDLNKLDFNKV 118 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHH--------CSSEEEEESCTTTSCGGGSCCSEE
T ss_pred CCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhcc--------CCCeEEEECchhhCCcccCCccEE
Confidence 5677899999999999999999875 4699999999999999998753 357999999999988766689999
Q ss_pred eechhhhc
Q 018970 235 WVQWCIGH 242 (348)
Q Consensus 235 i~~~~l~~ 242 (348)
+++..++.
T Consensus 119 v~NlPy~i 126 (295)
T 3gru_A 119 VANLPYQI 126 (295)
T ss_dssp EEECCGGG
T ss_pred EEeCcccc
Confidence 98866553
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.97 E-value=5.5e-10 Score=105.22 Aligned_cols=114 Identities=13% Similarity=0.086 Sum_probs=81.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCC--CCcCCCcceeEEEcCCCCCCC----CCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH--MAPDMHKATNFFCVPLQDFTP----ETG 229 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~--~~~~~~~~i~~~~~d~~~~~~----~~~ 229 (348)
.++.+||+||||+|.++..+++....+|+++|+++.+++.|++++...+. .......+++++..|..++.. ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 35689999999999999999877766899999999999999999864311 000011368999999877542 246
Q ss_pred ceeEEeechhh---hcCCh-hhHHHHHHHH----HHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCI---GHLTD-DDFVSFFKRA----KVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l---~~~~~-~d~~~~l~~~----~~~LkpgG~lii~~ 269 (348)
+||+|++...- ...+. -.-..+++.+ .++|+|||++++..
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 89999986432 11110 0124566666 99999999998864
No 255
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.95 E-value=2e-09 Score=103.15 Aligned_cols=110 Identities=16% Similarity=0.131 Sum_probs=86.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC---------------------------------------CcEEEEcCCHHHHHH
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~---------------------------------------~~v~~vD~S~~~l~~ 195 (348)
..++.+|||++||+|.++..++.... ..|+|+|+|+.|++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 56778999999999999988876532 259999999999999
Q ss_pred HHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeechhhhc-CC-hhhHHHHHHHHHHcCCC--CcEEEEEec
Q 018970 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH-LT-DDDFVSFFKRAKVGLKP--GGFFVLKEN 270 (348)
Q Consensus 196 a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~~~l~~-~~-~~d~~~~l~~~~~~Lkp--gG~lii~~~ 270 (348)
|++++...++ ..+++|.+.|+.+++.+ ++||+|+++..+.. +. .+++..+++.+.+.||+ ||.+++...
T Consensus 273 Ar~Na~~~gl-----~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 273 ARENAEIAGV-----DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHHTC-----GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHHHcCC-----CCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 9999876543 34699999999998765 68999999887642 22 24567788888888877 887777653
No 256
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.94 E-value=2.2e-09 Score=103.14 Aligned_cols=110 Identities=13% Similarity=0.101 Sum_probs=85.0
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC---------------------------------------CcEEEEcCCHHHHHH
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~---------------------------------------~~v~~vD~S~~~l~~ 195 (348)
..++..|||.+||+|.++...+.... ..|+++|+|+.|++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 56678999999999999888775432 149999999999999
Q ss_pred HHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeechhhhc-CC-hhhHHHHHHHHHHcCCC--CcEEEEEec
Q 018970 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH-LT-DDDFVSFFKRAKVGLKP--GGFFVLKEN 270 (348)
Q Consensus 196 a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~~~l~~-~~-~~d~~~~l~~~~~~Lkp--gG~lii~~~ 270 (348)
|++++...|+ ..++++.+.|+.+++.+ ++||+|+++..+.. +. .+++..+++.+.+.||+ ||.+++...
T Consensus 279 Ar~Na~~~gl-----~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 279 AKQNAVEAGL-----GDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHHTTC-----TTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHHcCC-----CCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9999876554 34689999999998765 58999999976532 21 13566777777777776 888877653
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.94 E-value=5.2e-09 Score=100.16 Aligned_cols=110 Identities=14% Similarity=0.090 Sum_probs=87.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC---------------------------------------CcEEEEcCCHHHHHH
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~---------------------------------------~~v~~vD~S~~~l~~ 195 (348)
..++..+||.+||+|.+++..+.... ..|+|+|+|+.|++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 56778999999999999988775432 149999999999999
Q ss_pred HHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeechhhhc-C-ChhhHHHHHHHHHHcCCC--CcEEEEEec
Q 018970 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH-L-TDDDFVSFFKRAKVGLKP--GGFFVLKEN 270 (348)
Q Consensus 196 a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~~~l~~-~-~~~d~~~~l~~~~~~Lkp--gG~lii~~~ 270 (348)
|++++...|+ ...+++.+.|+.+++.+ .+||+|+++..+.. + ..+++..+++.+.+.||+ ||.+++...
T Consensus 272 Ar~Na~~~gl-----~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 272 ARKNAREVGL-----EDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHHTTC-----TTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHHcCC-----CCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 9999876554 34699999999998765 58999999876542 2 235678888888888887 888877653
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.83 E-value=6.5e-09 Score=93.98 Aligned_cols=77 Identities=13% Similarity=0.162 Sum_probs=63.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC----CCc
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGR 230 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~ 230 (348)
+.++.+|||||||+|.++..++..+ .+|+++|+|+.|++.+++++.. ..++++..+|+.+++++ .++
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~~~ 97 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ--------QKNITIYQNDALQFDFSSVKTDKP 97 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT--------CTTEEEEESCTTTCCGGGSCCSSC
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh--------CCCcEEEEcchHhCCHHHhccCCC
Confidence 4667899999999999999999776 4699999999999999999864 35799999999998753 246
Q ss_pred eeEEeechhhh
Q 018970 231 YDVIWVQWCIG 241 (348)
Q Consensus 231 fD~Ii~~~~l~ 241 (348)
|| |+++...+
T Consensus 98 ~~-vv~NlPY~ 107 (255)
T 3tqs_A 98 LR-VVGNLPYN 107 (255)
T ss_dssp EE-EEEECCHH
T ss_pred eE-EEecCCcc
Confidence 88 66665544
No 259
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.80 E-value=8.8e-09 Score=93.89 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=64.5
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCC-CceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fD~ 233 (348)
+.++ +|||||||+|.++..++..+. +|+++|+|+.|++.+++++.. .++++.++|+.+++.+. ..+|.
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~---------~~v~vi~~D~l~~~~~~~~~~~~ 113 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG---------LPVRLVFQDALLYPWEEVPQGSL 113 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT---------SSEEEEESCGGGSCGGGSCTTEE
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC---------CCEEEEECChhhCChhhccCccE
Confidence 4567 999999999999999998875 599999999999999998753 46899999998887543 26899
Q ss_pred Eeechhhhc
Q 018970 234 IWVQWCIGH 242 (348)
Q Consensus 234 Ii~~~~l~~ 242 (348)
|+++...+.
T Consensus 114 iv~NlPy~i 122 (271)
T 3fut_A 114 LVANLPYHI 122 (271)
T ss_dssp EEEEECSSC
T ss_pred EEecCcccc
Confidence 988876554
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.80 E-value=3e-08 Score=94.46 Aligned_cols=128 Identities=13% Similarity=0.048 Sum_probs=85.7
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--CCC-------
Q 018970 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PET------- 228 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~------- 228 (348)
+.+|||+|||+|.++..++. ....|+++|+|+.+++.|++++...++ .+++|.++|+.++. ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~------~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHI------DNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTC------CSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEECCHHHHHHHHhhccccccc
Confidence 46899999999999998875 455799999999999999998865433 36899999887642 111
Q ss_pred -------CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCC
Q 018970 229 -------GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGL 301 (348)
Q Consensus 229 -------~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf 301 (348)
.+||+|++...-.. +...+.+.|+++|.+++..-... .. ...+..+. + ||
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr~g--------~~~~~~~~l~~~g~ivyvsc~p~----------t~---ard~~~l~-~-~y 343 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPRSG--------LDSETEKMVQAYPRILYISCNPE----------TL---CKNLETLS-Q-TH 343 (369)
T ss_dssp GGSCGGGCCEEEEEECCCTTC--------CCHHHHHHHTTSSEEEEEESCHH----------HH---HHHHHHHH-H-HE
T ss_pred cccccccCCCCEEEECcCccc--------cHHHHHHHHhCCCEEEEEECCHH----------HH---HHHHHHHh-h-Cc
Confidence 37999997644322 23445556668887766542110 01 11233333 2 68
Q ss_pred eEEEEeecCCCCcc
Q 018970 302 HIYKSKDQKGLPEE 315 (348)
Q Consensus 302 ~~v~~~~~~~~~~~ 315 (348)
++.......-||..
T Consensus 344 ~~~~~~~~D~FP~T 357 (369)
T 3bt7_A 344 KVERLALFDQFPYT 357 (369)
T ss_dssp EEEEEEEECCSTTS
T ss_pred EEEEEEeeccCCCC
Confidence 88877766667653
No 261
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.78 E-value=2.2e-07 Score=88.32 Aligned_cols=171 Identities=16% Similarity=0.104 Sum_probs=102.3
Q ss_pred hHHHHHHHHhhhcCCcc-CCCCCcEEEEeccccHHHHHHHHh--------C-------CC-cEEEEcCCHHHHHHHHHHh
Q 018970 138 SEAFLQMLLSDRFPNAR-NNQHLVALDCGSGIGRITKNLLIR--------Y-------FN-EVDLLEPVSHFLDAARESL 200 (348)
Q Consensus 138 ~~~~l~~~l~~~l~~~~-~~~~~~VLDvGcG~G~~~~~la~~--------~-------~~-~v~~vD~S~~~l~~a~~~~ 200 (348)
....+...+........ .....+|+|+|||+|..+..++.. . +. .|...|...+.....=+.+
T Consensus 32 ~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L 111 (374)
T 3b5i_A 32 MLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLL 111 (374)
T ss_dssp HHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHS
T ss_pred HHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhh
Confidence 34455555543222111 234679999999999998877321 1 22 6888887777665554444
Q ss_pred CCCCC-C-----CcCCCcceeEEEc---CCCCCCCCCCceeEEeechhhhcCCh--------------------------
Q 018970 201 APENH-M-----APDMHKATNFFCV---PLQDFTPETGRYDVIWVQWCIGHLTD-------------------------- 245 (348)
Q Consensus 201 ~~~~~-~-----~~~~~~~i~~~~~---d~~~~~~~~~~fD~Ii~~~~l~~~~~-------------------------- 245 (348)
....- . ........-|..+ .+-.-.+++++||+|+++.+||++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~ 191 (374)
T 3b5i_A 112 PPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK 191 (374)
T ss_dssp CCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH
T ss_pred hhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHH
Confidence 32100 0 0000001123333 22222356789999999999999872
Q ss_pred ----------hhHHHHHHHHHHcCCCCcEEEEEecccCCC--------------ce-----------------ecC-CCC
Q 018970 246 ----------DDFVSFFKRAKVGLKPGGFFVLKENIARSG--------------FV-----------------LDK-EDR 283 (348)
Q Consensus 246 ----------~d~~~~l~~~~~~LkpgG~lii~~~~~~~~--------------~~-----------------~d~-~~~ 283 (348)
.|+..+|+..++.|+|||.+++......+. .. ++. ...
T Consensus 192 v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P 271 (374)
T 3b5i_A 192 TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIP 271 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCcc
Confidence 166778999999999999999964332211 00 011 112
Q ss_pred ceecCHHHHHHHHHh-cCCeEEEEee
Q 018970 284 SITRSDFYFKELFSR-CGLHIYKSKD 308 (348)
Q Consensus 284 ~~~~s~~~l~~l~~~-aGf~~v~~~~ 308 (348)
.+.++.+++..++++ .||++...+.
T Consensus 272 ~y~ps~~E~~~~l~~~~~F~I~~le~ 297 (374)
T 3b5i_A 272 VYAPSLQDFKEVVDANGSFAIDKLVV 297 (374)
T ss_dssp BCCCCHHHHHHHHHHHCSEEEEEEEE
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEEEE
Confidence 334699999999984 8999877553
No 262
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.77 E-value=6.5e-09 Score=93.74 Aligned_cols=106 Identities=12% Similarity=-0.007 Sum_probs=69.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
+.++.+|||+|||+|.++..++.+ +...|.++|++-.+... .......+.++.+...+++......+.||+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~--------pi~~~~~g~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEK--------PMNVQSLGWNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCC--------CCCCCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccc--------ccccCcCCCCeEEEeccceehhcCCCCccE
Confidence 567789999999999999987755 34468889987443100 000001122455566665544555678999
Q ss_pred EeechhhhcCCh---hh--HHHHHHHHHHcCCCC-cEEEEEe
Q 018970 234 IWVQWCIGHLTD---DD--FVSFFKRAKVGLKPG-GFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~~~~~---~d--~~~~l~~~~~~Lkpg-G~lii~~ 269 (348)
|++..+.+ ... +. ...+++.+.++|+|| |.|++.-
T Consensus 144 VlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 144 LLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKV 184 (277)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 99977665 211 11 223578899999999 9999964
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.75 E-value=3.1e-08 Score=92.03 Aligned_cols=108 Identities=10% Similarity=-0.025 Sum_probs=78.2
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC--CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCC---C
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---G 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~--~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~---~ 229 (348)
+.++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++...|+ .++.+...|+.++.... +
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~------~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV------SCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGGGSCTTCGGGT
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CeEEEEeCChHhcCccccccC
Confidence 5677899999999999999998753 23799999999999999999876543 36889999988765332 4
Q ss_pred ceeEEeec------hhhhcCCh---------hhH-------HHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQ------WCIGHLTD---------DDF-------VSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~------~~l~~~~~---------~d~-------~~~l~~~~~~LkpgG~lii~~ 269 (348)
+||.|++. .++..-++ +++ ..+|+.+.++|+ ||.|+.+.
T Consensus 174 ~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp TEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred CCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 79999962 22222111 121 346888888887 99888765
No 264
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.74 E-value=1.2e-07 Score=90.15 Aligned_cols=142 Identities=15% Similarity=0.126 Sum_probs=94.1
Q ss_pred CCcEEEEeccccHHHHHHHHh-----------------CCC-cEEEEcCC-----------HHHHHHHHHHhCCCCCCCc
Q 018970 158 HLVALDCGSGIGRITKNLLIR-----------------YFN-EVDLLEPV-----------SHFLDAARESLAPENHMAP 208 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~-----------------~~~-~v~~vD~S-----------~~~l~~a~~~~~~~~~~~~ 208 (348)
..+|+|+||++|..+..++.. .+. .|...|.. +.+.+.+++..+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 578999999999999887765 111 67888877 5566555443321
Q ss_pred CCCcceeEEEcCCCCC---CCCCCceeEEeechhhhcCChh-------------------------------------hH
Q 018970 209 DMHKATNFFCVPLQDF---TPETGRYDVIWVQWCIGHLTDD-------------------------------------DF 248 (348)
Q Consensus 209 ~~~~~i~~~~~d~~~~---~~~~~~fD~Ii~~~~l~~~~~~-------------------------------------d~ 248 (348)
....-|..+....+ .++.+++|+|+++.+||++.+- |+
T Consensus 127 --~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~ 204 (384)
T 2efj_A 127 --KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDF 204 (384)
T ss_dssp --CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHH
Confidence 11234555544443 3567899999999999998641 22
Q ss_pred HHHHHHHHHcCCCCcEEEEEecccCCC--c-----------------------eecCCC-CceecCHHHHHHHHHhcC-C
Q 018970 249 VSFFKRAKVGLKPGGFFVLKENIARSG--F-----------------------VLDKED-RSITRSDFYFKELFSRCG-L 301 (348)
Q Consensus 249 ~~~l~~~~~~LkpgG~lii~~~~~~~~--~-----------------------~~d~~~-~~~~~s~~~l~~l~~~aG-f 301 (348)
..||+..++.|+|||.+++......+. . .+|... ..+..+.+++..++++.| |
T Consensus 205 ~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F 284 (384)
T 2efj_A 205 TTFLRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSF 284 (384)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSE
T ss_pred HHHHHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCc
Confidence 334777799999999999976443332 0 011111 223369999999999985 7
Q ss_pred eEEEEe
Q 018970 302 HIYKSK 307 (348)
Q Consensus 302 ~~v~~~ 307 (348)
++...+
T Consensus 285 ~i~~le 290 (384)
T 2efj_A 285 EILYLE 290 (384)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 777654
No 265
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.74 E-value=5e-09 Score=100.32 Aligned_cols=103 Identities=16% Similarity=0.162 Sum_probs=80.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHh--CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcc-eeEEEcCCCCCCC--CCCc
Q 018970 156 NQHLVALDCGSGIGRITKNLLIR--YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-TNFFCVPLQDFTP--ETGR 230 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~--~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~~--~~~~ 230 (348)
.++.+|||++||+|.++..++.+ +...|+++|+++.+++.+++++...++ ..+ +++...|+.++.. ..+.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl-----~~~~v~v~~~Da~~~l~~~~~~~ 125 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI-----PEDRYEIHGMEANFFLRKEWGFG 125 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHHHSCCSSC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC-----CCceEEEEeCCHHHHHHHhhCCC
Confidence 35679999999999999999875 335799999999999999999876544 234 8899988765421 1357
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
||+|++.. .. ....+++.+.+.|+|||+|+++.
T Consensus 126 fD~V~lDP-~g-----~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 126 FDYVDLDP-FG-----TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEEECC-SS-----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEECC-Cc-----CHHHHHHHHHHHhCCCCEEEEEe
Confidence 99999876 21 23468899999999999998875
No 266
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.70 E-value=5.2e-09 Score=99.94 Aligned_cols=101 Identities=14% Similarity=0.099 Sum_probs=78.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCC---------------CCCCcCCCcceeEEEcC
Q 018970 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPE---------------NHMAPDMHKATNFFCVP 220 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~---------------~~~~~~~~~~i~~~~~d 220 (348)
++.+|||+|||+|.++..++.+. ...|+++|+++.+++.+++++... ++ .++++.+.|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl------~~i~v~~~D 120 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE------KTIVINHDD 120 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS------SEEEEEESC
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC------CceEEEcCc
Confidence 45789999999999999999873 347999999999999999988653 22 238888988
Q ss_pred CCCCCC-CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 221 LQDFTP-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 221 ~~~~~~-~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+.++.. ..+.||+|++.. .. ....+++.+.+.|||||+++++.
T Consensus 121 a~~~~~~~~~~fD~I~lDP-~~-----~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 121 ANRLMAERHRYFHFIDLDP-FG-----SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHHSTTCEEEEEECC-SS-----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhccCCCCEEEeCC-CC-----CHHHHHHHHHHhcCCCCEEEEEe
Confidence 866431 125799999643 22 23578899999999999988864
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.67 E-value=6.3e-09 Score=94.28 Aligned_cols=81 Identities=15% Similarity=0.123 Sum_probs=61.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCH-------HHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC--C
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS-------HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P 226 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~-------~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~ 226 (348)
.++.+|||+|||+|.++..++..+. .|+++|+|+ .+++.|+++....++ ..++++.+.|+.++. .
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~-----~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDT-----AARINLHFGNAAEQMPAL 155 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHH-----HTTEEEEESCHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCC-----ccCeEEEECCHHHHHHhh
Confidence 4567999999999999999998765 599999999 999999876543211 234899999987742 2
Q ss_pred CC--CceeEEeechhhhc
Q 018970 227 ET--GRYDVIWVQWCIGH 242 (348)
Q Consensus 227 ~~--~~fD~Ii~~~~l~~ 242 (348)
++ ++||+|++..++.+
T Consensus 156 ~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHCCCSEEEECCCC--
T ss_pred hccCCCccEEEECCCCCC
Confidence 22 58999999877665
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.66 E-value=8.2e-08 Score=96.78 Aligned_cols=103 Identities=13% Similarity=0.080 Sum_probs=75.7
Q ss_pred CCCcEEEEeccccHHHH---HHHHhCCC--cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCce
Q 018970 157 QHLVALDCGSGIGRITK---NLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~---~la~~~~~--~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~f 231 (348)
....|||||||+|.+.. ..+++... +|++||.|+ |...+++.....++ ...|+++.+|++++..+ +++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~-----~dkVtVI~gd~eev~LP-EKV 429 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW-----GSQVTVVSSDMREWVAP-EKA 429 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT-----GGGEEEEESCTTTCCCS-SCE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC-----CCeEEEEeCcceeccCC-ccc
Confidence 34579999999999844 33334333 689999997 56677776665544 67899999999999876 789
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~li 266 (348)
|+||+-+.=..+-.+-....+....+.|||||.++
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99998443222222344578888899999999876
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.66 E-value=3.9e-08 Score=88.54 Aligned_cols=75 Identities=12% Similarity=0.143 Sum_probs=58.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCC--Ccee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET--GRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~--~~fD 232 (348)
..++.+|||||||+|.++..++..+..+|+++|+|+.|++.++++ . ..++++.++|+.++++++ +.|
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~---------~~~v~~i~~D~~~~~~~~~~~~~- 97 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G---------DERLEVINEDASKFPFCSLGKEL- 97 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C---------CTTEEEECSCTTTCCGGGSCSSE-
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c---------CCCeEEEEcchhhCChhHccCCc-
Confidence 456789999999999999999877545799999999999999876 2 346899999999987552 223
Q ss_pred EEeechhh
Q 018970 233 VIWVQWCI 240 (348)
Q Consensus 233 ~Ii~~~~l 240 (348)
.|+++...
T Consensus 98 ~vv~NlPy 105 (249)
T 3ftd_A 98 KVVGNLPY 105 (249)
T ss_dssp EEEEECCT
T ss_pred EEEEECch
Confidence 55555444
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.63 E-value=1.6e-07 Score=93.69 Aligned_cols=165 Identities=10% Similarity=-0.034 Sum_probs=102.2
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-------------------CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCccee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-------------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATN 215 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-------------------~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~ 215 (348)
+.++.+|||.|||+|.++..++... ...++|+|+++.++..|+.++.-.+.... .....+
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~-~~~~~~ 245 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGN-LDHGGA 245 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCB-GGGTBS
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCcc-ccccCC
Confidence 4566799999999999988776541 12699999999999999987654433110 001267
Q ss_pred EEEcCCCCCC-CCCCceeEEeechhhhcCCh------------hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCC
Q 018970 216 FFCVPLQDFT-PETGRYDVIWVQWCIGHLTD------------DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKED 282 (348)
Q Consensus 216 ~~~~d~~~~~-~~~~~fD~Ii~~~~l~~~~~------------~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~ 282 (348)
+.++|....+ ...++||+|+++..+..... ..-..++.++.+.|||||++.+..+.. +.+..
T Consensus 246 I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~---~L~~~-- 320 (541)
T 2ar0_A 246 IRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN---VLFEG-- 320 (541)
T ss_dssp EEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH---HHHCC--
T ss_pred eEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc---ceecC--
Confidence 8888876533 22368999999987765432 112479999999999999988875321 11110
Q ss_pred CceecCHHHHHHHHHhcC-CeEEEEeecCCCCccceEEEEEEEeecCC
Q 018970 283 RSITRSDFYFKELFSRCG-LHIYKSKDQKGLPEELFAVKMYALTAEMP 329 (348)
Q Consensus 283 ~~~~~s~~~l~~l~~~aG-f~~v~~~~~~~~~~~l~~v~~~~l~~~~~ 329 (348)
-....+++.+.+.+ +..+-.....-|...-.++.++.++..++
T Consensus 321 ----~~~~~iR~~L~~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~~~ 364 (541)
T 2ar0_A 321 ----GKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTV 364 (541)
T ss_dssp ----THHHHHHHHHHHHEEEEEEEECCSSCSSSCSCCEEEEEEEEBCS
T ss_pred ----cHHHHHHHHHhhcCCEEEEEEcCcCcccCCCCcEEEEEEECCCC
Confidence 01234655544433 33222222233444344666666665444
No 271
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.61 E-value=2.3e-07 Score=85.05 Aligned_cols=113 Identities=18% Similarity=0.219 Sum_probs=81.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~ 233 (348)
+.+.+||-||.|.|..++.+++.. ..+|+.+|+++.+++.+++.+..... +.--..+++++..|...+- ...++||+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~-~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccc-cccCCCcEEEEechHHHHHhhccccCCE
Confidence 456799999999999999998653 34899999999999999988642100 0001357999999998865 33578999
Q ss_pred EeechhhhcCChh--hHHHHHHHHHHcCCCCcEEEEEe
Q 018970 234 IWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~~~~~~--d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|++-..=..-+.. .-..+++.|.++|+|||+++...
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 9963211100000 12479999999999999999853
No 272
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.59 E-value=1.6e-07 Score=96.52 Aligned_cols=110 Identities=13% Similarity=0.048 Sum_probs=81.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-------------------------------------------CCcEEEEcCCHH
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-------------------------------------------FNEVDLLEPVSH 191 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-------------------------------------------~~~v~~vD~S~~ 191 (348)
..++..|||.+||+|.++...+... ...++|+|+++.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 4567899999999999988776542 025999999999
Q ss_pred HHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC--CCceeEEeechhhhc-C-ChhhHHHHHHHHHHc---CCCCcE
Q 018970 192 FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--TGRYDVIWVQWCIGH-L-TDDDFVSFFKRAKVG---LKPGGF 264 (348)
Q Consensus 192 ~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~--~~~fD~Ii~~~~l~~-~-~~~d~~~~l~~~~~~---LkpgG~ 264 (348)
|++.|+.++...|+ ...++|.+.|+.++..+ .++||+|+++..+.. + ..+++..+++.+.+. +.|||.
T Consensus 268 av~~A~~N~~~agv-----~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 268 VIQRARTNARLAGI-----GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHHTTC-----GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHcCC-----CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 99999999877655 44689999999887533 238999999977642 2 223455555555554 458998
Q ss_pred EEEEe
Q 018970 265 FVLKE 269 (348)
Q Consensus 265 lii~~ 269 (348)
+++..
T Consensus 343 ~~ilt 347 (703)
T 3v97_A 343 LSLFS 347 (703)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88854
No 273
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.56 E-value=4.6e-08 Score=90.49 Aligned_cols=78 Identities=19% Similarity=0.213 Sum_probs=63.1
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-----CC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----ET 228 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~~ 228 (348)
+.++.+|||+|||+|.++..++.... ..|+++|.|+.|++.|++++... +.++++.++|+.+++. ..
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~-------g~~v~~v~~d~~~l~~~l~~~g~ 96 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF-------SDRVSLFKVSYREADFLLKTLGI 96 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG-------TTTEEEEECCGGGHHHHHHHTTC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEECCHHHHHHHHHhcCC
Confidence 45778999999999999999998753 47999999999999999998653 2468999999887641 11
Q ss_pred CceeEEeechh
Q 018970 229 GRYDVIWVQWC 239 (348)
Q Consensus 229 ~~fD~Ii~~~~ 239 (348)
++||.|++...
T Consensus 97 ~~~D~Vl~D~g 107 (301)
T 1m6y_A 97 EKVDGILMDLG 107 (301)
T ss_dssp SCEEEEEEECS
T ss_pred CCCCEEEEcCc
Confidence 47999997543
No 274
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.55 E-value=5.9e-08 Score=87.51 Aligned_cols=76 Identities=8% Similarity=0.060 Sum_probs=58.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCc--EEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCC----
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---- 228 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~--v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~---- 228 (348)
+.++.+|||||||+|.++. +. ++ .. |+++|+|+.|++.+++++.. ..++++.++|+.++++++
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~ 87 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFL--------GPKLTIYQQDAMTFNFGELAEK 87 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTT--------GGGEEEECSCGGGCCHHHHHHH
T ss_pred CCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhcc--------CCceEEEECchhhCCHHHhhcc
Confidence 4567899999999999999 64 54 45 99999999999999988754 247999999998876431
Q ss_pred -CceeEEeechhhh
Q 018970 229 -GRYDVIWVQWCIG 241 (348)
Q Consensus 229 -~~fD~Ii~~~~l~ 241 (348)
+..|.|+++...+
T Consensus 88 ~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 88 MGQPLRVFGNLPYN 101 (252)
T ss_dssp HTSCEEEEEECCTT
T ss_pred cCCceEEEECCCCC
Confidence 2346777766543
No 275
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.52 E-value=1.3e-07 Score=86.57 Aligned_cols=77 Identities=10% Similarity=0.080 Sum_probs=59.7
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCc---EEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCC--
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNE---VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-- 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~---v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-- 229 (348)
+.++.+|||||||+|.++..|+..+... |+++|+|+.|++.++++. . .+++++++|+.++++++-
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~---------~~v~~i~~D~~~~~~~~~~~ 109 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G---------ELLELHAGDALTFDFGSIAR 109 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G---------GGEEEEESCGGGCCGGGGSC
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C---------CCcEEEECChhcCChhHhcc
Confidence 4667899999999999999999775532 999999999999999884 1 468999999988875421
Q ss_pred ----ceeEEeechhhh
Q 018970 230 ----RYDVIWVQWCIG 241 (348)
Q Consensus 230 ----~fD~Ii~~~~l~ 241 (348)
..+.|+++...+
T Consensus 110 ~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 110 PGDEPSLRIIGNLPYN 125 (279)
T ss_dssp SSSSCCEEEEEECCHH
T ss_pred cccCCceEEEEccCcc
Confidence 234566655544
No 276
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.50 E-value=4.7e-07 Score=85.43 Aligned_cols=146 Identities=18% Similarity=0.111 Sum_probs=96.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHh------------C---CC--cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEE
Q 018970 156 NQHLVALDCGSGIGRITKNLLIR------------Y---FN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~------------~---~~--~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~ 218 (348)
....+|+|+||++|..+..+... + .. .|...|...+....+-+.+.... . ..+.-|..
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~--~~~~~f~~ 124 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---D--VDGVCFIN 124 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---S--CTTCEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---c--cCCCEEEE
Confidence 34578999999999877655443 1 22 78999999888888877665311 0 01223444
Q ss_pred cCCCC---CCCCCCceeEEeechhhhcCCh-------------------------------hhHHHHHHHHHHcCCCCcE
Q 018970 219 VPLQD---FTPETGRYDVIWVQWCIGHLTD-------------------------------DDFVSFFKRAKVGLKPGGF 264 (348)
Q Consensus 219 ~d~~~---~~~~~~~fD~Ii~~~~l~~~~~-------------------------------~d~~~~l~~~~~~LkpgG~ 264 (348)
+.... -.++.+++|+|+++.+||++.+ .|+..||+..++.|+|||.
T Consensus 125 gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~ 204 (359)
T 1m6e_X 125 GVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGR 204 (359)
T ss_dssp EEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCE
T ss_pred ecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 43333 3466789999999999999763 2456779999999999999
Q ss_pred EEEEecccCCC--------cee----------------cC------CCCceecCHHHHHHHHHhcCC-eEEEE
Q 018970 265 FVLKENIARSG--------FVL----------------DK------EDRSITRSDFYFKELFSRCGL-HIYKS 306 (348)
Q Consensus 265 lii~~~~~~~~--------~~~----------------d~------~~~~~~~s~~~l~~l~~~aGf-~~v~~ 306 (348)
+++......+. ..+ +. ....+.++.+++..++++.|. .+...
T Consensus 205 mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 205 MVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp EEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred EEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 99964322111 001 11 111123588999999999965 65553
No 277
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.50 E-value=4.2e-08 Score=88.59 Aligned_cols=106 Identities=14% Similarity=0.020 Sum_probs=68.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
+.++.+|||+|||+|.++..++.+ +...|.++|++..+...+.. ......++.+...+.+....+.+.+|+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~--------~~~~g~~ii~~~~~~dv~~l~~~~~Dv 159 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM--------RTTLGWNLIRFKDKTDVFNMEVIPGDT 159 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--------CCBTTGGGEEEECSCCGGGSCCCCCSE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc--------cccCCCceEEeeCCcchhhcCCCCcCE
Confidence 567889999999999999987754 34478999998654321110 000122344444333322334578999
Q ss_pred EeechhhhcCCh---hh--HHHHHHHHHHcCCCC--cEEEEEe
Q 018970 234 IWVQWCIGHLTD---DD--FVSFFKRAKVGLKPG--GFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~~~~~---~d--~~~~l~~~~~~Lkpg--G~lii~~ 269 (348)
|+|-.+.. ... +. ...+|+-+.++|+|| |.|++.-
T Consensus 160 VLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 160 LLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence 99977666 221 11 224588889999999 9999975
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.44 E-value=9e-07 Score=88.30 Aligned_cols=158 Identities=11% Similarity=-0.068 Sum_probs=98.5
Q ss_pred CcEEEEeccccHHHHHHHHhC----------------CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCC
Q 018970 159 LVALDCGSGIGRITKNLLIRY----------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~~----------------~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~ 222 (348)
.+|||.+||+|.++..++... ...++|+|+++.++..|+.++.-.|+ ..++.+.++|..
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi-----~~~i~i~~gDtL 320 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI-----DFNFGKKNADSF 320 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC-----CCBCCSSSCCTT
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC-----Ccccceeccchh
Confidence 499999999999987765321 22699999999999999987654333 122333566654
Q ss_pred CCC-CCCCceeEEeechhhhcC-------------------------Ch--hhHHHHHHHHHHcCCCCcEEEEEecccCC
Q 018970 223 DFT-PETGRYDVIWVQWCIGHL-------------------------TD--DDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (348)
Q Consensus 223 ~~~-~~~~~fD~Ii~~~~l~~~-------------------------~~--~d~~~~l~~~~~~LkpgG~lii~~~~~~~ 274 (348)
..+ ....+||+|+++..+..- +. ..-..+++.+.+.|+|||.+.+..+.
T Consensus 321 ~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~--- 397 (544)
T 3khk_A 321 LDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN--- 397 (544)
T ss_dssp TSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET---
T ss_pred cCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc---
Confidence 433 334689999998776631 11 01126899999999999998876432
Q ss_pred CceecCCCCceecCHHHHHHHHHhcCC-eEEEEeecCCCCccceEEEEEEEeecCC
Q 018970 275 GFVLDKEDRSITRSDFYFKELFSRCGL-HIYKSKDQKGLPEELFAVKMYALTAEMP 329 (348)
Q Consensus 275 ~~~~d~~~~~~~~s~~~l~~l~~~aGf-~~v~~~~~~~~~~~l~~v~~~~l~~~~~ 329 (348)
++.... ......+++.+.+.+. ..+-.....-|.....++.++.++..++
T Consensus 398 g~L~~~-----~~~~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k~ 448 (544)
T 3khk_A 398 GSMSSN-----TNNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDKN 448 (544)
T ss_dssp HHHHCC-----GGGHHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESCCS
T ss_pred hhhhcC-----cchHHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecCCC
Confidence 111100 0134567776666554 2222222223444445777777775444
No 279
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.44 E-value=1.3e-06 Score=75.87 Aligned_cols=100 Identities=15% Similarity=0.038 Sum_probs=71.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC------------
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF------------ 224 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~------------ 224 (348)
+..+|||+||| +.+..++.....+|+.+|.++++.+.|++++...|+. ...+++++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~---~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPA---EGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCC---TTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCCceEEEEeCchhhhcccccccchhh
Confidence 34689999985 6777776532247999999999999999998765430 024689999986542
Q ss_pred ---C--------C-CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 225 ---T--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 225 ---~--------~-~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
+ . ..++||+|++-.-. ....+..+.+.|+|||+|++-
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSSCEEEEET
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCCCeEEEEe
Confidence 1 1 23689999986531 235566677999999998543
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.39 E-value=1.3e-07 Score=95.51 Aligned_cols=103 Identities=12% Similarity=0.053 Sum_probs=72.6
Q ss_pred CCcEEEEeccccHHHHHH--HHh--C----------CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC
Q 018970 158 HLVALDCGSGIGRITKNL--LIR--Y----------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD 223 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~l--a~~--~----------~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~ 223 (348)
...|||||||+|.++... +.+ + ...|++||.|+.++..++.... .++ ...++++.+|+++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~-----~d~VtVI~gd~ee 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW-----KRRVTIIESDMRS 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT-----TTCSEEEESCGGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC-----CCeEEEEeCchhh
Confidence 457999999999996432 211 1 1179999999977766655443 222 4569999999999
Q ss_pred CCCC-----CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 018970 224 FTPE-----TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (348)
Q Consensus 224 ~~~~-----~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~li 266 (348)
+..+ .+++|+||+-+.=.....+-....|..+.+.|||||.++
T Consensus 484 v~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 484 LPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 8752 478999998655222222334567788889999999876
No 281
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.38 E-value=4.7e-07 Score=81.81 Aligned_cols=133 Identities=13% Similarity=0.092 Sum_probs=84.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHh-------CC------CcEEEEcCCH---HHHH-----------HHHHHhCCCCCCC-
Q 018970 156 NQHLVALDCGSGIGRITKNLLIR-------YF------NEVDLLEPVS---HFLD-----------AARESLAPENHMA- 207 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~-------~~------~~v~~vD~S~---~~l~-----------~a~~~~~~~~~~~- 207 (348)
.+..+|||+|+|+|..+..++.. .+ .+++++|..| +++. .|++.+..+....
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34579999999999988876543 33 2689999776 4444 4555543311000
Q ss_pred -------cCCCcceeEEEcCCCC-CCCCC----CceeEEeec-hhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCC
Q 018970 208 -------PDMHKATNFFCVPLQD-FTPET----GRYDVIWVQ-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (348)
Q Consensus 208 -------~~~~~~i~~~~~d~~~-~~~~~----~~fD~Ii~~-~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~ 274 (348)
..-..++++..+|+.+ ++.-+ +.||+|+.- ++-...++-....+++.+.++|+|||.|+....
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa---- 214 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS---- 214 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC----
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC----
Confidence 0012467788888766 33211 279999984 222222211135799999999999999885321
Q ss_pred CceecCCCCceecCHHHHHHHHHhcCCeEEEE
Q 018970 275 GFVLDKEDRSITRSDFYFKELFSRCGLHIYKS 306 (348)
Q Consensus 275 ~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~ 306 (348)
...+++.+.++||.+...
T Consensus 215 --------------a~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 215 --------------AGFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp --------------BHHHHHHHHHHTEEEEEE
T ss_pred --------------CHHHHHHHHHCCCEEEeC
Confidence 134788899999997654
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.38 E-value=8.8e-08 Score=92.00 Aligned_cols=74 Identities=19% Similarity=0.167 Sum_probs=59.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCC--CCCCcCCCcceeEEEcCCCCC-CC-CCCcee
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF-TP-ETGRYD 232 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~--~~~~~~~~~~i~~~~~d~~~~-~~-~~~~fD 232 (348)
++.+|||+|||+|..+..++..+. +|+++|+|+.|++.|++++... |+ .++++.++|+.++ +. +.++||
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl------~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEG------KDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTT------CEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCC------CcEEEEECcHHHhhhhccCCCce
Confidence 467999999999999998886654 6999999999999999998642 21 4699999999875 21 125799
Q ss_pred EEeec
Q 018970 233 VIWVQ 237 (348)
Q Consensus 233 ~Ii~~ 237 (348)
+|++.
T Consensus 166 vV~lD 170 (410)
T 3ll7_A 166 YIYVD 170 (410)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 283
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.35 E-value=4.5e-07 Score=85.71 Aligned_cols=114 Identities=11% Similarity=0.044 Sum_probs=80.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCC--CCcCCCcceeEEEcCCCCCC----CCCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH--MAPDMHKATNFFCVPLQDFT----PETG 229 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~--~~~~~~~~i~~~~~d~~~~~----~~~~ 229 (348)
.++.+||-||.|.|..++.+++.....|+.+|+++.+++.+++.+....- .......+++++..|...+- ...+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 34679999999999999999976666899999999999999998764211 11111245788888875542 1235
Q ss_pred ceeEEeechhh-------hcCCh-hhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCI-------GHLTD-DDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l-------~~~~~-~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+||+|+.-..- ..... .-...+++.+.++|+|||+++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 79999974211 11111 123678999999999999998754
No 284
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.34 E-value=1.1e-07 Score=85.95 Aligned_cols=104 Identities=15% Similarity=0.086 Sum_probs=67.8
Q ss_pred CCC--CcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCC--CCCcC-CCcceeEEEcCCCCC-CCCCC
Q 018970 156 NQH--LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPEN--HMAPD-MHKATNFFCVPLQDF-TPETG 229 (348)
Q Consensus 156 ~~~--~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~--~~~~~-~~~~i~~~~~d~~~~-~~~~~ 229 (348)
.++ .+|||+|||+|..+..++..+. .|+++|.++.+.+.+++++.... ..... ...++++.++|..++ +...+
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~ 163 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITP 163 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSS
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcc
Confidence 445 7999999999999999998877 49999999988666665542110 00000 124689999998763 22224
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCc
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGG 263 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG 263 (348)
+||+|++...+.+-. + ..++++..++|++.+
T Consensus 164 ~fDvV~lDP~y~~~~-~--saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 164 RPQVVYLDPMFPHKQ-K--SALVKKEMRVFQSLV 194 (258)
T ss_dssp CCSEEEECCCCCCCC-C-------HHHHHHHHHS
T ss_pred cCCEEEEcCCCCCcc-c--chHHHHHHHHHHHhh
Confidence 799999988886632 1 245566666666643
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.33 E-value=7.3e-07 Score=80.99 Aligned_cols=106 Identities=12% Similarity=-0.048 Sum_probs=66.4
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|||+||++|.++..++++ +...|+++|++..+..... .......++.....+.+-.....+.+|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~--------~~~~~~~~iv~~~~~~di~~l~~~~~Dl 150 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPI--------HMQTLGWNIVKFKDKSNVFTMPTEPSDT 150 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCC--------CCCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccc--------cccccCCceEEeecCceeeecCCCCcCE
Confidence 467889999999999999998864 3447899998754311000 0000012233333333322334568999
Q ss_pred EeechhhhcCCh---hh--HHHHHHHHHHcCCCC-cEEEEEe
Q 018970 234 IWVQWCIGHLTD---DD--FVSFFKRAKVGLKPG-GFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~~~~~---~d--~~~~l~~~~~~Lkpg-G~lii~~ 269 (348)
|++..+.+ ... +. ...+++-+.++|+|| |.|++.-
T Consensus 151 VlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 151 LLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKV 191 (300)
T ss_dssp EEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEE
T ss_pred EeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 99966655 221 11 234588889999999 9999974
No 286
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.31 E-value=1.5e-05 Score=79.47 Aligned_cols=157 Identities=11% Similarity=0.011 Sum_probs=101.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC----CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC--C-CCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY----FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--T-PET 228 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~----~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~-~~~ 228 (348)
.++.+|||.+||+|.++..++... ...++|+|+++.++..|+.++.-.|.. ..++.+.++|.... + ...
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~----~~~~~I~~gDtL~~d~p~~~~ 295 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP----IENQFLHNADTLDEDWPTQEP 295 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCTTTSCSCCSSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC----cCccceEecceeccccccccc
Confidence 456799999999999998887663 237999999999999999876433321 13577888887654 3 234
Q ss_pred CceeEEeechhhhcCC-------------------h---hhHHHHHHHHHHcCC-CCcEEEEEecccCCCceecCCCCce
Q 018970 229 GRYDVIWVQWCIGHLT-------------------D---DDFVSFFKRAKVGLK-PGGFFVLKENIARSGFVLDKEDRSI 285 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~-------------------~---~d~~~~l~~~~~~Lk-pgG~lii~~~~~~~~~~~d~~~~~~ 285 (348)
..||+|+++..+..-. . .+ ..++..+.+.|+ |||++.+..+.. +.+..
T Consensus 296 ~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~gGr~a~VlP~g---~Lf~~----- 366 (542)
T 3lkd_A 296 TNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDNGVMAIVLPHG---VLFRG----- 366 (542)
T ss_dssp CCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTTCEEEEEEETH---HHHCC-----
T ss_pred ccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCceeEEEEecch---HhhCC-----
Confidence 7899999986654210 0 11 258999999999 999988765321 11100
Q ss_pred ecCHHHHHHHHHhcCC-eEEEEeecCCCCccceEEEEEEEee
Q 018970 286 TRSDFYFKELFSRCGL-HIYKSKDQKGLPEELFAVKMYALTA 326 (348)
Q Consensus 286 ~~s~~~l~~l~~~aGf-~~v~~~~~~~~~~~l~~v~~~~l~~ 326 (348)
-....+++.+.+.+. ..+-.....-|.....+..++.+..
T Consensus 367 -~~~~~iRk~Lle~~~l~~II~LP~~lF~~t~i~t~Ilvl~K 407 (542)
T 3lkd_A 367 -NAEGTIRKALLEEGAIDTVIGLPANIFFNTSIPTTVIILKK 407 (542)
T ss_dssp -THHHHHHHHHHHTTCEEEEEECCSSCSSSCCCCEEEEEECS
T ss_pred -chhHHHHHHHHhCCceeEEEEccccccCCCCCcEEEEEEec
Confidence 013457776665554 3333222333444445666666653
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.24 E-value=4.1e-06 Score=85.88 Aligned_cols=113 Identities=12% Similarity=0.070 Sum_probs=76.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC----CcEEEEcCCHHHHHHH--HHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF----NEVDLLEPVSHFLDAA--RESLAPENHMAPDMHKATNFFCVPLQDFT-PET 228 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~----~~v~~vD~S~~~l~~a--~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~ 228 (348)
.++.+|||.|||+|.++..++.... ..++|+|+++.+++.| +.++...++. .. .....+...|+.+.. ...
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Ll-hG-i~~~~I~~dD~L~~~~~~~ 397 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLV-SS-NNAPTITGEDVCSLNPEDF 397 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTC-BT-TBCCEEECCCGGGCCGGGG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhh-cC-CCcceEEecchhccccccc
Confidence 4567999999999999999887653 2799999999999999 5544321110 00 012345555555432 123
Q ss_pred CceeEEeechhhhc-CCh-h-------------------------hHHHHHHHHHHcCCCCcEEEEEec
Q 018970 229 GRYDVIWVQWCIGH-LTD-D-------------------------DFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~-~~~-~-------------------------d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+.||+|+++..+.. ... . -...+++.+.+.|+|||.+.+..+
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 68999999877732 110 0 134578999999999999988753
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.13 E-value=2.3e-05 Score=73.74 Aligned_cols=146 Identities=10% Similarity=0.016 Sum_probs=87.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
+.++.+|||+||++|.++..+++++. .|++||+.+ |-.... . ..++++...|...+.++.+.||+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~-l~~~l~----~--------~~~V~~~~~d~~~~~~~~~~~D~v 274 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP-MAQSLM----D--------TGQVTWLREDGFKFRPTRSNISWM 274 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC-CCHHHH----T--------TTCEEEECSCTTTCCCCSSCEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh-cChhhc----c--------CCCeEEEeCccccccCCCCCcCEE
Confidence 56889999999999999999998876 599999764 222111 1 356899999999988776789999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeecCCCCc
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQKGLPE 314 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~~~~~ 314 (348)
+|-.+... ......+......+..++.++.........+ .........+.+.|...||...-...+-...
T Consensus 275 vsDm~~~p---~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~------~~l~~~~~~i~~~l~~~g~~~~l~akhL~hd- 344 (375)
T 4auk_A 275 VCDMVEKP---AKVAALMAQWLVNGWCRETIFNLKLPMKKRY------EEVSHNLAYIQAQLDEHGINAQIQARQLYHD- 344 (375)
T ss_dssp EECCSSCH---HHHHHHHHHHHHTTSCSEEEEEEECCSSSHH------HHHHHHHHHHHHHHHHTTCCEEEEEECCTTC-
T ss_pred EEcCCCCh---HHhHHHHHHHHhccccceEEEEEEecccchH------HHHHHHHHHHHHHHHhcCcchhheehhhccC-
Confidence 99766432 2233344444444444454443332111100 0111233457788899999743322222211
Q ss_pred cceEEEEEEEe
Q 018970 315 ELFAVKMYALT 325 (348)
Q Consensus 315 ~l~~v~~~~l~ 325 (348)
-.-+.+++-+
T Consensus 345 -ReEiTV~~rk 354 (375)
T 4auk_A 345 -REEVTVHVRR 354 (375)
T ss_dssp -SSEEEEEEEE
T ss_pred -CcEEEEEEEe
Confidence 2245566554
No 289
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.09 E-value=6.7e-06 Score=77.65 Aligned_cols=115 Identities=15% Similarity=0.071 Sum_probs=83.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~fD 232 (348)
+.++.+|||+.||.|.=+.++++.+.. .|+++|+|+.-+...++++...+........++.+...|...+. ...+.||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 678899999999999999999876554 79999999999999988876544333333456788888877654 2346899
Q ss_pred EEee----ch----hhhc-------CChhh-------HHHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWV----QW----CIGH-------LTDDD-------FVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~----~~----~l~~-------~~~~d-------~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.|++ +. ++.. ...++ ...+|.++.++|||||.|+.++
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 9995 22 1111 11111 2467889999999999998875
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.09 E-value=3.9e-06 Score=68.40 Aligned_cols=85 Identities=11% Similarity=0.040 Sum_probs=60.9
Q ss_pred CCCCcEEEEecccc-HHHHHHHH-hCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCC-Ccee
Q 018970 156 NQHLVALDCGSGIG-RITKNLLI-RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYD 232 (348)
Q Consensus 156 ~~~~~VLDvGcG~G-~~~~~la~-~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~fD 232 (348)
.++.+|||||||.| ..+..|++ .+++ |+++|+++..++ +.+.|+.+..... ..||
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~~-V~atDInp~Av~---------------------~v~dDiF~P~~~~Y~~~D 91 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKVD-LVLTDIKPSHGG---------------------IVRDDITSPRMEIYRGAA 91 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCCE-EEEECSSCSSTT---------------------EECCCSSSCCHHHHTTEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCCe-EEEEECCccccc---------------------eEEccCCCCcccccCCcC
Confidence 35679999999999 69999987 5664 999999875442 6778887643221 3799
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|++...- .++...+.++++. -|.-++|..
T Consensus 92 LIYsirPP-----~El~~~i~~lA~~--v~adliI~p 121 (153)
T 2k4m_A 92 LIYSIRPP-----AEIHSSLMRVADA--VGARLIIKP 121 (153)
T ss_dssp EEEEESCC-----TTTHHHHHHHHHH--HTCEEEEEC
T ss_pred EEEEcCCC-----HHHHHHHHHHHHH--cCCCEEEEc
Confidence 99875543 2566777777664 356677764
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.04 E-value=1.9e-05 Score=71.52 Aligned_cols=177 Identities=15% Similarity=0.112 Sum_probs=92.3
Q ss_pred cCCCCCCCcccCHHHHHHHhhcCCccchhhhhhHHHhh-hhcccccc-ccccccccCccccccc-ChhhhHHHHHHHHhh
Q 018970 72 SGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQWYREG-ISYWEGVE-ASVDGVLGGFGNVNEV-DIKGSEAFLQMLLSD 148 (348)
Q Consensus 72 ~~~~~~g~~~~~~~~~w~~~l~~~~~~~~~~~~~y~~~-~~yW~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~ 148 (348)
.|...-|..-.++.++|++.|.. +.+..|+.-- ...++-.. ...+..-.+ ..... .......-|..+...
T Consensus 17 ~~~~rg~~~g~tlG~~wK~~LN~-----l~k~~F~~Yk~~gi~Evdr~~ar~~l~~g--~~~~g~y~SR~~~KL~ei~~~ 89 (321)
T 3lkz_A 17 RGSHMGGAKGRTLGEVWKERLNQ-----MTKEEFTRYRKEAIIEVDRSAAKHARKEG--NVTGGHPVSRGTAKLRWLVER 89 (321)
T ss_dssp ---------CCSHHHHHHHHHTT-----SCHHHHHHHTTTTCEEECCHHHHHHHHHT--CCSSCCCSSTHHHHHHHHHHT
T ss_pred ccCcCCCCCCCchHHHHHHHHhc-----cCHHHHHHHhhcCceeechHHHHHHHhcC--cCcCCCccchHHHHHHHHHHh
Confidence 34444455567799999999886 3444554321 22222110 000000001 00000 112222334444433
Q ss_pred hcCCccCCCCCcEEEEeccccHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEc-CCCCCCC
Q 018970 149 RFPNARNNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTP 226 (348)
Q Consensus 149 ~l~~~~~~~~~~VLDvGcG~G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~ 226 (348)
. .+.++.+|||+||++|.++.+.+.. +...|.++|+...--+.- ..+...+ ...+.+... |+..++.
T Consensus 90 ~----~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~------w~lV~~~~~~Dv~~l~~ 158 (321)
T 3lkz_A 90 R----FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYG------WNIVTMKSGVDVFYRPS 158 (321)
T ss_dssp T----SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTT------GGGEEEECSCCTTSSCC
T ss_pred c----CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcC------CcceEEEeccCHhhCCC
Confidence 2 2578889999999999999976654 444899999764411000 0000000 133667766 8777664
Q ss_pred CCCceeEEeechhhhcCChh-----hHHHHHHHHHHcCCCC-cEEEEEe
Q 018970 227 ETGRYDVIWVQWCIGHLTDD-----DFVSFFKRAKVGLKPG-GFFVLKE 269 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~~~~~~-----d~~~~l~~~~~~Lkpg-G~lii~~ 269 (348)
..+|+|+|-.. .--+.. ....+|+-+.++|++| |-|+|.-
T Consensus 159 --~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KV 204 (321)
T 3lkz_A 159 --ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKV 204 (321)
T ss_dssp --CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred --CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEE
Confidence 56999998544 322211 1234778888999999 9988854
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.00 E-value=9.6e-06 Score=74.02 Aligned_cols=128 Identities=9% Similarity=0.029 Sum_probs=86.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC------CCcEEEEcCCH--------------------------HHHHHHHHHhCCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVS--------------------------HFLDAARESLAPE 203 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~------~~~v~~vD~S~--------------------------~~l~~a~~~~~~~ 203 (348)
..+..|||||+..|..+..++... ...|+++|... ..++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 455799999999999988876431 23699999542 1467788888765
Q ss_pred CCCCcCCCcceeEEEcCCCC-CC-CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCC
Q 018970 204 NHMAPDMHKATNFFCVPLQD-FT-PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKE 281 (348)
Q Consensus 204 ~~~~~~~~~~i~~~~~d~~~-~~-~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~ 281 (348)
|+. ..+++++.+|+.+ ++ .+.++||+|++-.-.. +....+|+.+...|+|||++++-+...
T Consensus 185 gl~----~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv~DD~~~--------- 247 (282)
T 2wk1_A 185 DLL----DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVIVDDYMM--------- 247 (282)
T ss_dssp TCC----STTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEEESSCTT---------
T ss_pred CCC----cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEEEcCCCC---------
Confidence 441 2579999998765 33 2246899999754321 135678999999999999887765310
Q ss_pred CCceecCHHHHHHHHHhcCCeE
Q 018970 282 DRSITRSDFYFKELFSRCGLHI 303 (348)
Q Consensus 282 ~~~~~~s~~~l~~l~~~aGf~~ 303 (348)
..-...-+.+.+++.|+.+
T Consensus 248 ---~~G~~~Av~Ef~~~~~i~~ 266 (282)
T 2wk1_A 248 ---CPPCKDAVDEYRAKFDIAD 266 (282)
T ss_dssp ---CHHHHHHHHHHHHHTTCCS
T ss_pred ---CHHHHHHHHHHHHhcCCce
Confidence 0011345677777777653
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.97 E-value=1e-05 Score=71.95 Aligned_cols=104 Identities=12% Similarity=-0.043 Sum_probs=61.6
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcc-eeEEEc-CCCCCCCCCCce
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-TNFFCV-PLQDFTPETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~-i~~~~~-d~~~~~~~~~~f 231 (348)
++++.+|||+||++|.++...+... ...|.|.++.... . .........+.+ +.|..+ |+.++. ...+
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-------~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-------EEPMLMQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-------CCCCCCCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-------cCCCcccCCCceEEEeeccCCccCCC--CCCC
Confidence 6889999999999999999877541 2234555543220 0 000000000111 344445 887754 3579
Q ss_pred eEEeechhhhcCCh--hh---HHHHHHHHHHcCCCCc-EEEEEe
Q 018970 232 DVIWVQWCIGHLTD--DD---FVSFFKRAKVGLKPGG-FFVLKE 269 (348)
Q Consensus 232 D~Ii~~~~l~~~~~--~d---~~~~l~~~~~~LkpgG-~lii~~ 269 (348)
|+|+|-.+-. ... -| ...+|.-+.++|+||| .|++.-
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 9999854332 111 11 2236777889999999 888865
No 294
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.80 E-value=1.9e-06 Score=99.54 Aligned_cols=141 Identities=17% Similarity=0.180 Sum_probs=70.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC------CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-CCCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPET 228 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~------~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~ 228 (348)
.+..+|||||+|+|..+..++... +.+++..|+|+...+.|++++.. ..++....|..+. .+..
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---------~di~~~~~d~~~~~~~~~ 1309 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---------LHVTQGQWDPANPAPGSL 1309 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---------HTEEEECCCSSCCCC---
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---------cccccccccccccccCCC
Confidence 456799999999998877665542 22799999999888888776532 1122222233221 1134
Q ss_pred CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCc-----eecCCC--CceecCHHHHHHHHHhcCC
Q 018970 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGF-----VLDKED--RSITRSDFYFKELFSRCGL 301 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~-----~~d~~~--~~~~~s~~~l~~l~~~aGf 301 (348)
.+||+|++.+++|..+ ++...++++.++|||||++++.+......+ .+.... .....+.+.|.++|..+||
T Consensus 1310 ~~ydlvia~~vl~~t~--~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf 1387 (2512)
T 2vz8_A 1310 GKADLLVCNCALATLG--DPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGASL 1387 (2512)
T ss_dssp --CCEEEEECC----------------------CCEEEEEEC--------------------------CTTTTSSTTTTE
T ss_pred CceeEEEEcccccccc--cHHHHHHHHHHhcCCCcEEEEEeccccccccccccccccccccCCcccCHHHHHHHHHhCCC
Confidence 6799999999998766 778899999999999999998764321000 011000 0112456678888999999
Q ss_pred eEEEEe
Q 018970 302 HIYKSK 307 (348)
Q Consensus 302 ~~v~~~ 307 (348)
..+...
T Consensus 1388 ~~~~~~ 1393 (2512)
T 2vz8_A 1388 HLVALK 1393 (2512)
T ss_dssp EEEEEE
T ss_pred ceeeec
Confidence 987654
No 295
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.79 E-value=4.2e-05 Score=69.31 Aligned_cols=73 Identities=16% Similarity=0.060 Sum_probs=59.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----CCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PETG 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~ 229 (348)
+.++..+||++||.|..+..++++. ..|+|+|.++.+++.|++ +.. .++.++..++.++. ...+
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~~-g~VigiD~Dp~Ai~~A~~-L~~---------~rv~lv~~~f~~l~~~L~~~g~~ 88 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILERG-GRVIGLDQDPEAVARAKG-LHL---------PGLTVVQGNFRHLKRHLAALGVE 88 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHH-TCC---------TTEEEEESCGGGHHHHHHHTTCS
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHCC-CEEEEEeCCHHHHHHHHh-hcc---------CCEEEEECCcchHHHHHHHcCCC
Confidence 5677899999999999999999873 379999999999999998 643 36889998887764 1225
Q ss_pred ceeEEeech
Q 018970 230 RYDVIWVQW 238 (348)
Q Consensus 230 ~fD~Ii~~~ 238 (348)
++|.|++..
T Consensus 89 ~vDgIL~DL 97 (285)
T 1wg8_A 89 RVDGILADL 97 (285)
T ss_dssp CEEEEEEEC
T ss_pred CcCEEEeCC
Confidence 799998643
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.77 E-value=8.8e-05 Score=65.06 Aligned_cols=105 Identities=12% Similarity=0.039 Sum_probs=68.3
Q ss_pred CCCCCcEEEEeccccHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEc-CCCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~fD 232 (348)
+.++.+|||+||++|.++.+.+.. +...|.++|+-..--+. ...+...| ...++|... |+..++. .++|
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~g------wn~v~fk~gvDv~~~~~--~~~D 146 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYG------WNIVKLMSGKDVFYLPP--EKCD 146 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTT------TTSEEEECSCCGGGCCC--CCCS
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcC------cCceEEEeccceeecCC--cccc
Confidence 578889999999999999977654 44489999975432210 00011111 145888888 8766554 5699
Q ss_pred EEeechhhhcCCh----hhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWVQWCIGHLTD----DDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~----~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|+|-..-..-.. .....+|+-+.++|++ |-|+|.-
T Consensus 147 tllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 147 TLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred EEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 9998544322221 1123478888999999 7888854
No 297
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.58 E-value=0.00083 Score=63.76 Aligned_cols=148 Identities=16% Similarity=0.067 Sum_probs=96.7
Q ss_pred CcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------CCCc
Q 018970 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--------ETGR 230 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--------~~~~ 230 (348)
.+++|+-||.|.++..+...++..|.++|+++.+++..+.++.. ..+++.|+.++.. ..+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~-----------~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPR-----------SLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTT-----------SEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCC-----------CceEecChhhcCHHHHHhhcccCCC
Confidence 47999999999999999988988889999999999999888643 4567778877642 2357
Q ss_pred eeEEeechhhhcCC------hhh-HHHH---HHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcC
Q 018970 231 YDVIWVQWCIGHLT------DDD-FVSF---FKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCG 300 (348)
Q Consensus 231 fD~Ii~~~~l~~~~------~~d-~~~~---l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aG 300 (348)
+|+|+.......+. .+| ...+ +-++...++| .+++.||+..--. .......+.+. .|++.|
T Consensus 72 ~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P--~~~v~ENV~gl~s------~~~~~~~~~i~-~l~~~G 142 (376)
T 3g7u_A 72 IDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP--LFFLAENVPGIMQ------EKYSGIRNKAF-NLVSGD 142 (376)
T ss_dssp CCEEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCC--SEEEEEECTTTTC------GGGHHHHHHHH-HHHHTT
T ss_pred eeEEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCC--CEEEEecchHhhc------cCcHHHHHHHH-HHHcCC
Confidence 99999755433332 011 1122 2334445677 5667777643110 00011234566 889999
Q ss_pred CeE-EE---EeecCCCCccceEEEEEEEee
Q 018970 301 LHI-YK---SKDQKGLPEELFAVKMYALTA 326 (348)
Q Consensus 301 f~~-v~---~~~~~~~~~~l~~v~~~~l~~ 326 (348)
|.+ .. .....+.|..--.+.+.+.+.
T Consensus 143 Y~v~~~~vl~a~dyGvPQ~R~R~~iig~r~ 172 (376)
T 3g7u_A 143 YDILDPIKVKASDYGAPTIRTRYFFIGVKK 172 (376)
T ss_dssp EEECCCEEEEGGGGTCSBCCEEEEEEEEEG
T ss_pred CccCcEEEEEHhhCCCCCCCcEEEEEEEeC
Confidence 998 22 233456787766777766653
No 298
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.51 E-value=0.0004 Score=69.01 Aligned_cols=109 Identities=17% Similarity=0.037 Sum_probs=73.8
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC--------------CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY--------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~--------------~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d 220 (348)
+.++.+|+|-+||+|.+........ ...++|+|+++.+...|+-++--.|. ...++...|
T Consensus 215 p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~------~~~~I~~~d 288 (530)
T 3ufb_A 215 PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL------EYPRIDPEN 288 (530)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC------SCCEEECSC
T ss_pred cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC------ccccccccc
Confidence 4667799999999999987665421 12599999999999999866432222 223456666
Q ss_pred CCCCCC----CCCceeEEeechhhhcCCh--------------hhHHHHHHHHHHcCC-------CCcEEEEEe
Q 018970 221 LQDFTP----ETGRYDVIWVQWCIGHLTD--------------DDFVSFFKRAKVGLK-------PGGFFVLKE 269 (348)
Q Consensus 221 ~~~~~~----~~~~fD~Ii~~~~l~~~~~--------------~d~~~~l~~~~~~Lk-------pgG~lii~~ 269 (348)
....+. ....||+|+++..+..-.+ +.-..++..+.+.|| |||++.+.-
T Consensus 289 tL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 289 SLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp TTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 554431 1247999999988752211 112357888888887 799988865
No 299
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.33 E-value=0.00062 Score=63.83 Aligned_cols=145 Identities=17% Similarity=0.197 Sum_probs=93.2
Q ss_pred CcEEEEeccccHHHHHHHHhC--CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC---CCceeE
Q 018970 159 LVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRYDV 233 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~~--~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fD~ 233 (348)
.+|+|+-||.|.++..+...+ +..|.++|+++.+++..+.++.. ..+.+.|+.++... ...+|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-----------~~~~~~Di~~~~~~~~~~~~~D~ 71 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-----------TQLLAKTIEGITLEEFDRLSFDM 71 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------SCEECSCGGGCCHHHHHHHCCSE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-----------cccccCCHHHccHhHcCcCCcCE
Confidence 579999999999999998888 44799999999999999999754 34667788776421 125899
Q ss_pred EeechhhhcCCh-------hh-HHHHHH---HHHHcCC--CCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcC
Q 018970 234 IWVQWCIGHLTD-------DD-FVSFFK---RAKVGLK--PGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCG 300 (348)
Q Consensus 234 Ii~~~~l~~~~~-------~d-~~~~l~---~~~~~Lk--pgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aG 300 (348)
|+.......+.. +| ...++. ++...++ |. +++.||+..-. . ..+...+.+.|++.|
T Consensus 72 l~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~l~---~------~~~~~~i~~~l~~~G 140 (343)
T 1g55_A 72 ILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKGFE---V------SSTRDLLIQTIENCG 140 (343)
T ss_dssp EEECCC------------------CHHHHHHHHGGGCSSCCS--EEEEEEETTGG---G------SHHHHHHHHHHHHTT
T ss_pred EEEcCCCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCcccc---C------HHHHHHHHHHHHHCC
Confidence 998655332221 11 111333 3444455 63 55557664310 0 123456888899999
Q ss_pred CeEEEEee---cCCCCccceEEEEEEEe
Q 018970 301 LHIYKSKD---QKGLPEELFAVKMYALT 325 (348)
Q Consensus 301 f~~v~~~~---~~~~~~~l~~v~~~~l~ 325 (348)
|.+..... ..+.|..--.+.+.+.+
T Consensus 141 Y~v~~~vl~a~~~GvPQ~R~R~~iv~~~ 168 (343)
T 1g55_A 141 FQYQEFLLSPTSLGIPNSRLRYFLIAKL 168 (343)
T ss_dssp EEEEEEEECGGGGTCSCCCCEEEEEEEE
T ss_pred CeeEEEEEEHHHCCCCCcccEEEEEEEe
Confidence 99776433 34577776666666655
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.09 E-value=0.00072 Score=61.96 Aligned_cols=46 Identities=22% Similarity=0.036 Sum_probs=40.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP 202 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~ 202 (348)
.++..|||++||+|..+..++..+. .++|+|+++.+++.|++++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHH
Confidence 4677999999999999998876665 599999999999999988753
No 301
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.08 E-value=0.0044 Score=57.59 Aligned_cols=148 Identities=13% Similarity=0.040 Sum_probs=95.5
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC-CCceeEEee
Q 018970 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIWV 236 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fD~Ii~ 236 (348)
+.+++|+-||.|.++..+...++..|.++|+++.+++..+.++... . ..|+.++... -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~--------~-----~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK--------P-----EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC--------C-----BSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC--------C-----cCCHHHcCHhhCCCCCEEEE
Confidence 3689999999999999999888888999999999999999998642 1 3566554421 135899997
Q ss_pred chhhhcCC---------hh--hHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 237 QWCIGHLT---------DD--DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 237 ~~~l~~~~---------~~--d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
......+. |+ .+-.-+-++.+.++| .+++.||+..-. . ......-+.+.+.|++.||.+..
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P--~~~~~ENV~gl~---~---~~~~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKP--KVVFMENVKNFA---S---HDNGNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCC--SEEEEEEEGGGG---T---GGGGHHHHHHHHHHHHTTBCCEE
T ss_pred CCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccC--cEEEEeCcHHHH---h---ccccHHHHHHHHHHHhCCCEEEE
Confidence 54333321 11 122223334455688 466777764311 0 00012345688889999998766
Q ss_pred Ee---ecCCCCccceEEEEEEEee
Q 018970 306 SK---DQKGLPEELFAVKMYALTA 326 (348)
Q Consensus 306 ~~---~~~~~~~~l~~v~~~~l~~ 326 (348)
.. ...+.|..--.+.+.+.+.
T Consensus 150 ~vl~a~~~GvPQ~R~R~~iv~~~~ 173 (327)
T 2c7p_A 150 KVLNALDYGIPQKRERIYMICFRN 173 (327)
T ss_dssp EEEEGGGGTCSBCCEEEEEEEEBG
T ss_pred EEEEHHHcCCCccceEEEEEEEeC
Confidence 43 2446777766666666653
No 302
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.86 E-value=0.0062 Score=56.15 Aligned_cols=142 Identities=10% Similarity=-0.021 Sum_probs=93.6
Q ss_pred CcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---------CCCC
Q 018970 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---------PETG 229 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---------~~~~ 229 (348)
..||++|||-=.....+.......|+-+| -|..++..++.+.+.+.. ...+..++.+|+.+ . +..+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~---~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVT---PTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCC---CSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCC---CCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 46999999975554444311112577888 589999888887532211 13467788889876 3 1112
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCce-----------ecCCC-------Ccee--cC-
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFV-----------LDKED-------RSIT--RS- 288 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~-----------~d~~~-------~~~~--~s- 288 (348)
.-=++++-.+++|+++++...+++.+...+.||+.+++........+. +.... ..+. .+
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 258 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDEN 258 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCC
Confidence 345788899999999988999999999999999998886533221110 11111 1222 25
Q ss_pred HHHHHHHHHhcCCeEEE
Q 018970 289 DFYFKELFSRCGLHIYK 305 (348)
Q Consensus 289 ~~~l~~l~~~aGf~~v~ 305 (348)
.+++.+.|.+.||+.+.
T Consensus 259 ~~~~~~~f~~~G~~~~~ 275 (310)
T 2uyo_A 259 RAVVADWLNRHGWRATA 275 (310)
T ss_dssp CCCHHHHHTTTTEEEEE
T ss_pred hHHHHHHHHHCcCcccc
Confidence 67899999999999883
No 303
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.81 E-value=0.0081 Score=55.78 Aligned_cols=148 Identities=10% Similarity=-0.032 Sum_probs=95.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC--CcE-EEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC---CCc
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF--NEV-DLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGR 230 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~--~~v-~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~ 230 (348)
...+++|+-||.|.++..+...++ ..| .++|+++.+++.-+.++... +...|+.++... ...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------------~~~~DI~~~~~~~i~~~~ 76 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------------VQVKNLDSISIKQIESLN 76 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------------CBCCCTTTCCHHHHHHTC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------------cccCChhhcCHHHhccCC
Confidence 456899999999999999987775 556 79999999999999988641 345677776521 126
Q ss_pred eeEEeechhhhcC---------C-hhhHHHHHHHHHH-cCCC---CcEEEEEecccCCCceecCCCCceecCHHHHHHHH
Q 018970 231 YDVIWVQWCIGHL---------T-DDDFVSFFKRAKV-GLKP---GGFFVLKENIARSGFVLDKEDRSITRSDFYFKELF 296 (348)
Q Consensus 231 fD~Ii~~~~l~~~---------~-~~d~~~~l~~~~~-~Lkp---gG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~ 296 (348)
+|+++.......+ . ++....++.++.+ +++. .-.+++.||+..-.. ....+.+.+.|
T Consensus 77 ~Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~---------~~~~~~i~~~l 147 (327)
T 3qv2_A 77 CNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKE---------SLVFKEIYNIL 147 (327)
T ss_dssp CCEEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGG---------SHHHHHHHHHH
T ss_pred CCEEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcC---------hHHHHHHHHHH
Confidence 8999975543333 0 1122234555555 4432 136777787753110 12346788889
Q ss_pred HhcCCeEEEEee---cCCCCccceEEEEEEEe
Q 018970 297 SRCGLHIYKSKD---QKGLPEELFAVKMYALT 325 (348)
Q Consensus 297 ~~aGf~~v~~~~---~~~~~~~l~~v~~~~l~ 325 (348)
++.||.+..... ..+.|..--.+.+.+.+
T Consensus 148 ~~~GY~v~~~vl~a~~yGvPQ~R~R~fivg~r 179 (327)
T 3qv2_A 148 IKNQYYIKDIICSPIDIGIPNSRTRYYVMARL 179 (327)
T ss_dssp HHTTCEEEEEEECGGGGTCSBCCCEEEEEEES
T ss_pred HhCCCEEEEEEEeHHHcCCCccceEEEEEEEe
Confidence 999999776443 34567665555555553
No 304
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.80 E-value=0.0051 Score=57.31 Aligned_cols=144 Identities=10% Similarity=0.079 Sum_probs=95.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCC---------Cc------CCCcceeEEEcC
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHM---------AP------DMHKATNFFCVP 220 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~---------~~------~~~~~i~~~~~d 220 (348)
+...|+.+|||.......+...+.. .+.=+|. |.+++.-++.+.+.+.. .. -...+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4578999999999999888866443 3445554 77777666655432100 00 002467788889
Q ss_pred CCCCC--------C-CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccC----CCce----------
Q 018970 221 LQDFT--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR----SGFV---------- 277 (348)
Q Consensus 221 ~~~~~--------~-~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~----~~~~---------- 277 (348)
+.+.. . ..+...++++-.++.+++.+....+++.+.+.. |+|.+++.+.+.. ..+.
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~~~l~~~ 254 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQSNLKES 254 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHHHHhhcc
Confidence 87731 1 224678999999999999999999999999987 7888877665433 1110
Q ss_pred ecCCCCce--ecCHHHHHHHHHhcCCe
Q 018970 278 LDKEDRSI--TRSDFYFKELFSRCGLH 302 (348)
Q Consensus 278 ~d~~~~~~--~~s~~~l~~l~~~aGf~ 302 (348)
....-.+. ..+.+...+.|.++||.
T Consensus 255 rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 255 RNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred cCCcccccccCCCHHHHHHHHHHCCCC
Confidence 11111111 13777888889999997
No 305
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.57 E-value=0.0042 Score=58.29 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=49.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC
Q 018970 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 224 (348)
++..|||||.|.|.+|..|++.. +..|+++|+++.++...++.+ . ..+++++.+|+.++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--------GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--------TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--------CCCEEEEECCccch
Confidence 35789999999999999999763 457999999999999998876 2 24688899998665
No 306
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.45 E-value=0.024 Score=52.69 Aligned_cols=144 Identities=17% Similarity=0.139 Sum_probs=94.2
Q ss_pred CcEEEEeccccHHHHHHHHhCC--CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC---CCceeE
Q 018970 159 LVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRYDV 233 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~~~--~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~fD~ 233 (348)
.+++|+=||.|.++..+...++ ..|.++|+++..++.-+.++.. ..+...|+.++... ...+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~-----------~~~~~~DI~~~~~~~~~~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE-----------TNLLNRNIQQLTPQVIKKWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------SCEECCCGGGCCHHHHHHTTCCE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC-----------CceeccccccCCHHHhccCCCCE
Confidence 4799999999999999987776 4689999999999999988754 33556777766421 135899
Q ss_pred EeechhhhcC---------Chh--h-HHHHHHHHHHcCC-CCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcC
Q 018970 234 IWVQWCIGHL---------TDD--D-FVSFFKRAKVGLK-PGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCG 300 (348)
Q Consensus 234 Ii~~~~l~~~---------~~~--d-~~~~l~~~~~~Lk-pgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aG 300 (348)
++.......+ .++ . +..++ ++.+.++ | .+++.||+..-.. ....+.+.+.|++.|
T Consensus 73 l~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~-r~i~~~~~P--~~~vlENV~gl~~---------~~~~~~i~~~l~~~G 140 (333)
T 4h0n_A 73 ILMSPPCQPFTRNGKYLDDNDPRTNSFLYLI-GILDQLDNV--DYILMENVKGFEN---------STVRNLFIDKLKECN 140 (333)
T ss_dssp EEECCCCCCSEETTEECCTTCTTSCCHHHHH-HHGGGCTTC--CEEEEEECTTGGG---------SHHHHHHHHHHHHTT
T ss_pred EEecCCCcchhhhhhccCCcCcccccHHHHH-HHHHHhcCC--CEEEEecchhhhh---------hhHHHHHHHHHHhCC
Confidence 9964433322 111 1 12222 3444454 6 6777787753110 012467889999999
Q ss_pred CeEEEEeec---CCCCccceEEEEEEEe
Q 018970 301 LHIYKSKDQ---KGLPEELFAVKMYALT 325 (348)
Q Consensus 301 f~~v~~~~~---~~~~~~l~~v~~~~l~ 325 (348)
|.+...... .+.|..--.+.+.+.+
T Consensus 141 Y~v~~~vl~a~~~GvPQ~R~R~fiva~r 168 (333)
T 4h0n_A 141 FIYQEFLLCPSTVGVPNSRLRYYCTARR 168 (333)
T ss_dssp EEEEEEEECTTTTTCSCCCCEEEEEEEE
T ss_pred CeEEEEEecHHHcCCCccceEEEEEEEe
Confidence 998775543 3467665566666655
No 307
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.33 E-value=0.0032 Score=57.01 Aligned_cols=145 Identities=9% Similarity=0.005 Sum_probs=98.2
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-C---CCCCCceeE
Q 018970 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-F---TPETGRYDV 233 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~---~~~~~~fD~ 233 (348)
+..+||+=+|+|.++..++..+ ++++.+|.++..++..++++.. ..++.++..|... + ..+..+||+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~--------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHF--------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCT--------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred CCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCc--------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 3578999999999999998744 7899999999999999998865 3568888888543 1 233357999
Q ss_pred EeechhhhcCChhhHHHHHHHHHH--cCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEeecCC
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKDQKG 311 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~--~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~~~~ 311 (348)
|++-..+..-. +...+++.+.+ .+.|+|++++--++... ...+.+.+-+++.|.++...+....
T Consensus 163 VfiDPPYe~k~--~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~------------~~~~~~~~~l~~~~~~~l~~el~~~ 228 (283)
T 2oo3_A 163 IFIDPSYERKE--EYKEIPYAIKNAYSKFSTGLYCVWYPVVNK------------AWTEQFLRKMREISSKSVRIELHLN 228 (283)
T ss_dssp EEECCCCCSTT--HHHHHHHHHHHHHHHCTTSEEEEEEEESSH------------HHHHHHHHHHHHHCSSEEEEEEECC
T ss_pred EEECCCCCCCc--HHHHHHHHHHHhCccCCCeEEEEEEeccch------------HHHHHHHHHHHhcCCCeEEEEEEec
Confidence 99988776423 56666666655 45789999986544321 1234566777777765444332221
Q ss_pred --CCccceEEEEEEEe
Q 018970 312 --LPEELFAVKMYALT 325 (348)
Q Consensus 312 --~~~~l~~v~~~~l~ 325 (348)
.+..+...-|+++-
T Consensus 229 ~~~~~gm~gsGm~viN 244 (283)
T 2oo3_A 229 PLINEGMTGCGLWIIN 244 (283)
T ss_dssp CSSCCSCCEEEEEEES
T ss_pred CCCCCCcCceeEEEEC
Confidence 11344556666654
No 308
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.28 E-value=0.014 Score=53.56 Aligned_cols=130 Identities=14% Similarity=0.098 Sum_probs=73.0
Q ss_pred CCCCcEEEEeccccHHHHHHH----HhCCC---cEEEEcCCH------------HHHHHHHHHhCCCCCCCcCCCcceeE
Q 018970 156 NQHLVALDCGSGIGRITKNLL----IRYFN---EVDLLEPVS------------HFLDAARESLAPENHMAPDMHKATNF 216 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la----~~~~~---~v~~vD~S~------------~~l~~a~~~~~~~~~~~~~~~~~i~~ 216 (348)
.+.-+|||+|-|+|....... +..+. +++.+|..+ ...+......... ..-....++
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~----~~~~v~L~l 170 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY----EGERLSLKV 170 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE----ECSSEEEEE
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc----cCCcEEEEE
Confidence 344689999999998654322 22333 455555311 1112122221110 000124556
Q ss_pred EEcCCCC-CC-CCCCceeEEeech-hhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHH
Q 018970 217 FCVPLQD-FT-PETGRYDVIWVQW-CIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFK 293 (348)
Q Consensus 217 ~~~d~~~-~~-~~~~~fD~Ii~~~-~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~ 293 (348)
..+|+.+ ++ .+...||+|+.-. +-..-++=--..+++.++++++|||.|.-.. +...++
T Consensus 171 ~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt------------------aag~VR 232 (308)
T 3vyw_A 171 LLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS------------------SSLSVR 232 (308)
T ss_dssp EESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC------------------CCHHHH
T ss_pred EechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe------------------CcHHHH
Confidence 6677654 22 2335799999632 2122121112589999999999999875322 123588
Q ss_pred HHHHhcCCeEEEEe
Q 018970 294 ELFSRCGLHIYKSK 307 (348)
Q Consensus 294 ~l~~~aGf~~v~~~ 307 (348)
+.|.++||.+....
T Consensus 233 R~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 233 KSLLTLGFKVGSSR 246 (308)
T ss_dssp HHHHHTTCEEEEEE
T ss_pred HHHHHCCCEEEecC
Confidence 99999999977653
No 309
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.28 E-value=0.0035 Score=56.73 Aligned_cols=117 Identities=12% Similarity=0.063 Sum_probs=71.1
Q ss_pred CCCCCcEEEEec------cccHHHHHHHHhCCC--cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC
Q 018970 155 NNQHLVALDCGS------GIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP 226 (348)
Q Consensus 155 ~~~~~~VLDvGc------G~G~~~~~la~~~~~--~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 226 (348)
.+.+.+|||+|| -+|... +...++. .|+++|+.+-.. .. -.++++|..+...
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~s-----------------da-~~~IqGD~~~~~~ 166 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFVS-----------------DA-DSTLIGDCATVHT 166 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCBC-----------------SS-SEEEESCGGGEEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCccccc-----------------CC-CeEEEcccccccc
Confidence 677899999996 677742 2222443 689999764211 11 2447888765443
Q ss_pred CCCceeEEeechhhh---cCChhh------HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHH
Q 018970 227 ETGRYDVIWVQWCIG---HLTDDD------FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFS 297 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~---~~~~~d------~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~ 297 (348)
. ++||+|++-.+-. +..-+. .+.++.-+.+.|+|||.|++.-.... . .+++.++.+
T Consensus 167 ~-~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs--------g------~~~L~~lrk 231 (344)
T 3r24_A 167 A-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS--------W------NADLYKLMG 231 (344)
T ss_dssp S-SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS--------C------CHHHHHHHT
T ss_pred C-CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC--------C------HHHHHHHHh
Confidence 3 7899999743221 211111 45567778889999999999853221 1 133555553
Q ss_pred hcCCeEEEEee
Q 018970 298 RCGLHIYKSKD 308 (348)
Q Consensus 298 ~aGf~~v~~~~ 308 (348)
-|+.+....
T Consensus 232 --~F~~VK~fK 240 (344)
T 3r24_A 232 --HFSWWTAFV 240 (344)
T ss_dssp --TEEEEEEEE
T ss_pred --hCCeEEEEC
Confidence 687777654
No 310
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.23 E-value=0.007 Score=56.10 Aligned_cols=72 Identities=13% Similarity=0.186 Sum_probs=55.9
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhC-CC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----CC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRY-FN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~-~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (348)
+.++..++|+.||.|..+..+++.. .. .|+++|.++.+++.++ ++. ..+++++..++.++. ..
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~---------~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID---------DPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC---------CTTEEEEESCGGGHHHHHHHTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc---------CCcEEEEeCCHHHHHHHHHhcC
Confidence 5788899999999999999999774 32 7999999999999984 431 356888888887753 11
Q ss_pred -CCceeEEee
Q 018970 228 -TGRYDVIWV 236 (348)
Q Consensus 228 -~~~fD~Ii~ 236 (348)
.+++|.|++
T Consensus 125 ~~~~vDgILf 134 (347)
T 3tka_A 125 LIGKIDGILL 134 (347)
T ss_dssp CTTCEEEEEE
T ss_pred CCCcccEEEE
Confidence 136888884
No 311
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.02 E-value=0.068 Score=49.16 Aligned_cols=146 Identities=14% Similarity=0.099 Sum_probs=95.4
Q ss_pred cEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC-CCceeEEeech
Q 018970 160 VALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIWVQW 238 (348)
Q Consensus 160 ~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~fD~Ii~~~ 238 (348)
+|||+=||.|.++..+-..++.-|.++|+++.+++.-+.++.. .+...|+.++... -...|+++...
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~------------~~~~~DI~~i~~~~~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSA------------KLIKGDISKISSDEFPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCS------------EEEESCGGGCCGGGSCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCC------------CcccCChhhCCHhhCCcccEEEecC
Confidence 6999999999999999888888889999999999988888643 3566788776522 24689999643
Q ss_pred hhhcC---------Chh--hHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 239 CIGHL---------TDD--DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 239 ~l~~~---------~~~--d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
....+ .|+ .+-.-+-++.+.++| .+++.||+.. +. .... ...-..+.+.|++.||.+....
T Consensus 70 PCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~P--k~~~~ENV~g--l~-~~~~---~~~~~~i~~~l~~~GY~v~~~v 141 (331)
T 3ubt_Y 70 PSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKP--IFFLAENVKG--MM-AQRH---NKAVQEFIQEFDNAGYDVHIIL 141 (331)
T ss_dssp CGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCC--SEEEEEECCG--GG-GCTT---SHHHHHHHHHHHHHTEEEEEEE
T ss_pred CCCCcCCCCCccCCCCchhHHHHHHHHHHhccCC--eEEEeeeecc--cc-cccc---cchhhhhhhhhccCCcEEEEEe
Confidence 32222 221 122223345555788 4667787643 11 0001 1233567788999999876644
Q ss_pred e---cCCCCccceEEEEEEEe
Q 018970 308 D---QKGLPEELFAVKMYALT 325 (348)
Q Consensus 308 ~---~~~~~~~l~~v~~~~l~ 325 (348)
. ..+.|..--.+.+.+.+
T Consensus 142 lna~~yGvPQ~R~Rvfivg~r 162 (331)
T 3ubt_Y 142 LNANDYGVAQDRKRVFYIGFR 162 (331)
T ss_dssp EEGGGTTCSBCCEEEEEEEEE
T ss_pred cccccCCCCcccceEEEEEEc
Confidence 3 34677776666666665
No 312
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.97 E-value=0.011 Score=52.98 Aligned_cols=57 Identities=14% Similarity=0.118 Sum_probs=45.0
Q ss_pred HHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCC
Q 018970 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP 202 (348)
Q Consensus 140 ~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~ 202 (348)
.++..++... ..++..|||..||+|..+...+..+. .++|+|+++.+++.+++++..
T Consensus 200 ~l~~~~i~~~-----~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 200 DLIERIIRAS-----SNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHHHH-----CCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHh
Confidence 4555555432 35678999999999999998776555 699999999999999998764
No 313
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.61 E-value=0.091 Score=51.23 Aligned_cols=153 Identities=15% Similarity=0.077 Sum_probs=92.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC---------
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--------- 227 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~--------- 227 (348)
...+++|+=||.|.++..+...++..|.++|+++..++.-+.++.. .....+++.|+.++...
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~--------~p~~~~~~~DI~~i~~~~~~~~~~~~ 158 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYC--------DPATHHFNEDIRDITLSHQEGVSDEA 158 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCC--------CTTTCEEESCTHHHHCTTCTTSCHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhccc--------CCCcceeccchhhhhhccccccchhh
Confidence 3568999999999999999877877799999999999988888743 12344566676554311
Q ss_pred --------CCceeEEeechhhhcCCh-----------------h---hHHHHHHHHHHcCCCCcEEEEEecccCCCceec
Q 018970 228 --------TGRYDVIWVQWCIGHLTD-----------------D---DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLD 279 (348)
Q Consensus 228 --------~~~fD~Ii~~~~l~~~~~-----------------~---d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d 279 (348)
...+|+|+.......+.- + .+-.-+-++.+.++| .+++.||+..-..
T Consensus 159 ~~~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rP--k~fvlENV~gl~s--- 233 (482)
T 3me5_A 159 AAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP--AMFVLENVKNLKS--- 233 (482)
T ss_dssp HHHHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCC--SEEEEEEETTTTT---
T ss_pred HHhhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCC--cEEEEeCcHHHhc---
Confidence 135899986543332221 0 111222234444577 5677787653111
Q ss_pred CCCCceecCHHHHHHHHHhcCCeEEE----------Ee-ecCCCCccceEEEEEEEe
Q 018970 280 KEDRSITRSDFYFKELFSRCGLHIYK----------SK-DQKGLPEELFAVKMYALT 325 (348)
Q Consensus 280 ~~~~~~~~s~~~l~~l~~~aGf~~v~----------~~-~~~~~~~~l~~v~~~~l~ 325 (348)
......-..+.+.|++.||.+.. .. -....|..--.+.+.+.+
T Consensus 234 ---~~~g~~f~~i~~~L~~lGY~v~~~~~~g~~~~~vlnA~~~vPQ~R~R~fivg~r 287 (482)
T 3me5_A 234 ---HDKGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFR 287 (482)
T ss_dssp ---GGGGHHHHHHHHHHHHTTEEETTTTCCSTTCTTEEEGGGTSSBCCEEEEEEEEE
T ss_pred ---ccCCcHHHHHHHHHhcCCcEEEeccccCcccceeeeccccCCccceEEEEEEEe
Confidence 00012335678889999998731 11 111256665566666655
No 314
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.95 E-value=0.082 Score=50.04 Aligned_cols=47 Identities=23% Similarity=0.319 Sum_probs=36.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC------CC--cEEEEcCCHHHHHHHHHHhCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY------FN--EVDLLEPVSHFLDAARESLAP 202 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~------~~--~v~~vD~S~~~l~~a~~~~~~ 202 (348)
..+..|+|+|+|.|.++..++... +. +++.||+|+...+.-++.+..
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 345689999999999998887531 11 799999999988877776654
No 315
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.79 E-value=0.27 Score=43.81 Aligned_cols=132 Identities=8% Similarity=0.082 Sum_probs=78.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHh-------CC-CcEEEEc-----CCHH----------------------HHHHH---H
Q 018970 156 NQHLVALDCGSGIGRITKNLLIR-------YF-NEVDLLE-----PVSH----------------------FLDAA---R 197 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~-------~~-~~v~~vD-----~S~~----------------------~l~~a---~ 197 (348)
+-+..|+|+||-.|..+..++.. +. ..|+++| +.+. .++.. .
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 34578999999999988776532 12 3799988 3221 11111 1
Q ss_pred HHhCCCCCCCcCCCcceeEEEcCCCCC-C-----CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecc
Q 018970 198 ESLAPENHMAPDMHKATNFFCVPLQDF-T-----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (348)
Q Consensus 198 ~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-----~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~ 271 (348)
++....+.. ..+++++.+++.+. + .+.++||+|++-.-.. +.....+..+...|+|||++++-+..
T Consensus 148 ~~~~~~g~~----~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y----~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 148 ECSDFFGHV----TQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLY----EPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp HTTSTTTTS----CCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCH----HHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhhhcCCC----CCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCccc----chHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 122222211 36799999987652 2 2335799999755321 13567889999999999999887631
Q ss_pred cCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 272 ARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 272 ~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
. ..+ .--..-|.+.+.+.|.++..
T Consensus 220 ~-~~w---------~G~~~A~~ef~~~~~~~i~~ 243 (257)
T 3tos_A 220 N-PKW---------PGENIAMRKVLGLDHAPLRL 243 (257)
T ss_dssp C-TTC---------THHHHHHHHHTCTTSSCCEE
T ss_pred C-CCC---------hHHHHHHHHHHhhCCCeEEE
Confidence 1 000 01123466677777766544
No 316
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.34 E-value=0.14 Score=47.90 Aligned_cols=96 Identities=14% Similarity=-0.015 Sum_probs=64.5
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----CC
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (348)
+.++.+||-+|||. |.++..+++. +...|+++|.++..++.+++.-.. .++...-.++. ..
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT------------HVINSKTQDPVAAIKEIT 255 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCC------------EEecCCccCHHHHHHHhc
Confidence 67888999999986 8888888765 443699999999999998764221 11111111110 11
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.+.+|+|+-.-.- ...++.+.++|+|||.+++...
T Consensus 256 ~gg~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 256 DGGVNFALESTGS--------PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp TSCEEEEEECSCC--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEeCC
Confidence 2369999854321 2467888999999999988643
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.15 E-value=0.26 Score=46.06 Aligned_cols=99 Identities=18% Similarity=0.034 Sum_probs=64.7
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCC----CC-CCCC
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL----QD-FTPE 227 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~----~~-~~~~ 227 (348)
+.++.+||-+|+|. |.++..+++.. ...|+++|.++..++.+++.-... .+++...|+ .+ ....
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~---------vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA---------TVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE---------EECTTSSCHHHHHHSTTSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE---------EECCCCcCHHHHHHhhhhcc
Confidence 67788999999976 77888887654 437999999999999887752210 011101111 00 0011
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.+.+|+|+-+-. ....++.+.++|++||.+++...
T Consensus 251 ~gg~Dvvid~~G--------~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 251 PGGVDVVIECAG--------VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TTCEEEEEECSC--------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEECCC--------CHHHHHHHHHHhccCCEEEEEec
Confidence 247999986422 12467888899999999988643
No 318
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.99 E-value=0.31 Score=51.64 Aligned_cols=150 Identities=16% Similarity=0.075 Sum_probs=92.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCC------------C
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL------------Q 222 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~------------~ 222 (348)
....+++|+=||.|.++..|...++ ..+.++|+++.+++.-+.++.. ..++..|+ .
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~-----------~~~~~~DI~~l~~~~~~~di~ 606 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPG-----------STVFTEDCNILLKLVMAGETT 606 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTT-----------SEEECSCHHHHHHHHHHTCSB
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC-----------CccccccHHHHhhhccchhhh
Confidence 4456899999999999999988887 5689999999999988888754 22333332 1
Q ss_pred C-----CCCCCCceeEEeechhhhcCCh---------hh----HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCc
Q 018970 223 D-----FTPETGRYDVIWVQWCIGHLTD---------DD----FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRS 284 (348)
Q Consensus 223 ~-----~~~~~~~fD~Ii~~~~l~~~~~---------~d----~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~ 284 (348)
+ ++ ..+.+|+|+.......+.. ++ +..-+-++.+.++| .+++.||+..-. . ...
T Consensus 607 ~~~~~~lp-~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rP--k~~llENV~gll---s-~~~- 678 (1002)
T 3swr_A 607 NSRGQRLP-QKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRP--RFFLLENVRNFV---S-FKR- 678 (1002)
T ss_dssp CTTCCBCC-CTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCC--SEEEEEEEGGGG---T-TGG-
T ss_pred hhhhhhcc-cCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCC--CEEEEeccHHHh---c-cCc-
Confidence 1 22 2357999996543332211 11 11122344455677 567777764310 0 000
Q ss_pred eecCHHHHHHHHHhcCCeEEEEee---cCCCCccceEEEEEEEe
Q 018970 285 ITRSDFYFKELFSRCGLHIYKSKD---QKGLPEELFAVKMYALT 325 (348)
Q Consensus 285 ~~~s~~~l~~l~~~aGf~~v~~~~---~~~~~~~l~~v~~~~l~ 325 (348)
......+.+.|++.||.+..... ..+.|..--.+.+.+.+
T Consensus 679 -~~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fiva~r 721 (1002)
T 3swr_A 679 -SMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 721 (1002)
T ss_dssp -GHHHHHHHHHHHHHTCEEEEEEEEGGGGTCSBCCEEEEEEEEC
T ss_pred -chHHHHHHHHHHhcCCeEEEEEEEHHHCCCCccceEEEEEEEe
Confidence 12235677888999999766433 34567765666666654
No 319
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.80 E-value=0.082 Score=48.99 Aligned_cols=92 Identities=15% Similarity=0.017 Sum_probs=64.0
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
+.++.+||-+|+|. |.++..+++....+|++++.+++.++.+++.-.+ . +. .+.+.+. ..+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-----------~-v~-~~~~~~~---~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVK-----------H-FY-TDPKQCK---EELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCS-----------E-EE-SSGGGCC---SCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCC-----------e-ec-CCHHHHh---cCCCE
Confidence 67888999999986 7888888766444799999999999988763211 1 11 2322222 27999
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
|+-.-.-. ..+..+.++|+|||.+++...
T Consensus 238 vid~~g~~--------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 238 IISTIPTH--------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp EEECCCSC--------CCHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCcH--------HHHHHHHHHHhcCCEEEEECC
Confidence 98643211 246678889999999998643
No 320
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.73 E-value=0.11 Score=47.15 Aligned_cols=91 Identities=10% Similarity=0.047 Sum_probs=56.0
Q ss_pred ceeEEEcCCCCC-C-CCCCceeEEeechhhhcCCh------------------hhHHHHHHHHHHcCCCCcEEEEEeccc
Q 018970 213 ATNFFCVPLQDF-T-PETGRYDVIWVQWCIGHLTD------------------DDFVSFFKRAKVGLKPGGFFVLKENIA 272 (348)
Q Consensus 213 ~i~~~~~d~~~~-~-~~~~~fD~Ii~~~~l~~~~~------------------~d~~~~l~~~~~~LkpgG~lii~~~~~ 272 (348)
.+.++++|..+. . .++++||+|+++.......+ ..+..+++++.++|||||.+++.....
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 467888887662 2 34579999999876643211 123567889999999999998864321
Q ss_pred CCCceecCCCCc-eec-CHHHHHHHHHhcCCeEEEE
Q 018970 273 RSGFVLDKEDRS-ITR-SDFYFKELFSRCGLHIYKS 306 (348)
Q Consensus 273 ~~~~~~d~~~~~-~~~-s~~~l~~l~~~aGf~~v~~ 306 (348)
. ........ ... -...+..+++++||.....
T Consensus 101 ~---~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~ 133 (297)
T 2zig_A 101 A---VARRRFGRHLVFPLHADIQVRCRKLGFDNLNP 133 (297)
T ss_dssp E---EECC----EEEECHHHHHHHHHHHTTCEEEEE
T ss_pred c---cccccCCcccccccHHHHHHHHHHcCCeeecc
Confidence 0 00000000 011 1346778899999987763
No 321
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.72 E-value=0.18 Score=42.38 Aligned_cols=92 Identities=12% Similarity=0.025 Sum_probs=59.5
Q ss_pred CCCCCcEEEEec--cccHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 155 NNQHLVALDCGS--GIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 155 ~~~~~~VLDvGc--G~G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
+.++.+||..|+ |.|..+..++.. +. +|+++|.+++.++.+++. .. . .. .|..+..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~-g~----------~-~~--~d~~~~~~~~~~~ 100 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRL-GV----------E-YV--GDSRSVDFADEIL 100 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTT-CC----------S-EE--EETTCSTHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc-CC----------C-EE--eeCCcHHHHHHHH
Confidence 567889999994 567776666654 54 699999999888776542 10 0 11 1222111
Q ss_pred --CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 226 --PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 226 --~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
...+.+|+|+.+-. . ..++.+.++|+|||.+++...
T Consensus 101 ~~~~~~~~D~vi~~~g----~-----~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 101 ELTDGYGVDVVLNSLA----G-----EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHTTTCCEEEEEECCC----T-----HHHHHHHHTEEEEEEEEECSC
T ss_pred HHhCCCCCeEEEECCc----h-----HHHHHHHHHhccCCEEEEEcC
Confidence 11236999986432 1 357788899999999988643
No 322
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.69 E-value=0.11 Score=49.14 Aligned_cols=102 Identities=9% Similarity=-0.118 Sum_probs=64.7
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-C-----C
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-----P 226 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-----~ 226 (348)
+.++.+||.+|||. |.++..+++. +...|+++|.|+..++.+++. . .+++...-.++ . .
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-G------------a~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-G------------FETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-T------------CEEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-C------------CcEEcCCCcchHHHHHHHH
Confidence 67888999999987 8888888765 443799999999999888642 1 11221111111 0 0
Q ss_pred -CCCceeEEeechhhhcCC------hhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 227 -ETGRYDVIWVQWCIGHLT------DDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 -~~~~fD~Ii~~~~l~~~~------~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
....+|+|+-.-.-.... ..+....++.+.++|++||.+++..
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 112699998644322100 0001246788899999999988754
No 323
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.60 E-value=0.17 Score=46.68 Aligned_cols=95 Identities=18% Similarity=0.050 Sum_probs=64.3
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCC
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~ 229 (348)
+.++.+||-+|+|. |..+..+++....+|+++|.+++.++.+++.-.. .++...-.++. ...+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~i~~~~~~~~~~~~~~~g 231 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAE------------VAVNARDTDPAAWLQKEIG 231 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC------------EEEeCCCcCHHHHHHHhCC
Confidence 67888999999986 8888888876544799999999999988764221 11111111110 0113
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+|+|+.... ....++.+.++|+|||.+++..
T Consensus 232 ~~d~vid~~g--------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 232 GAHGVLVTAV--------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SEEEEEESSC--------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCEEEEeCC--------CHHHHHHHHHHhccCCEEEEeC
Confidence 6898875422 1246788889999999998864
No 324
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.14 E-value=0.54 Score=43.55 Aligned_cols=95 Identities=18% Similarity=0.102 Sum_probs=62.5
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcC---CCCC----C
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP---LQDF----T 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d---~~~~----~ 225 (348)
+.++.+||-+|+|. |.++..++..... .|+++|.++..++.+++.-.. .++..+ -.++ .
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD------------LVLQISKESPQEIARKVE 236 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS------------EEEECSSCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC------------EEEcCcccccchHHHHHH
Confidence 67788999999986 7888888765443 799999999999888753211 111111 0000 0
Q ss_pred -CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
...+.+|+|+-.-.- ...+..+.++|+|||.+++..
T Consensus 237 ~~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 237 GQLGCKPEVTIECTGA--------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHTSCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHhCCCCCEEEECCCC--------hHHHHHHHHHhcCCCEEEEEe
Confidence 001468999854321 245678889999999998754
No 325
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=93.12 E-value=0.15 Score=48.73 Aligned_cols=48 Identities=23% Similarity=0.320 Sum_probs=40.7
Q ss_pred CCCCCcEEEEeccccHHHHHHH-HhCC--CcEEEEcCCHHHHHHHHHHhCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLL-IRYF--NEVDLLEPVSHFLDAARESLAP 202 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la-~~~~--~~v~~vD~S~~~l~~a~~~~~~ 202 (348)
+.++..|+||||+.|.++..++ .... ..|+++|++|...+..++++..
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4678899999999999999887 3443 4799999999999999988754
No 326
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=93.09 E-value=2.9 Score=38.58 Aligned_cols=151 Identities=14% Similarity=0.078 Sum_probs=90.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC--cEEEEcCCHHHHHHHHHHhCCC--------------CCC--Cc-CCCcceeEE
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPE--------------NHM--AP-DMHKATNFF 217 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~--~v~~vD~S~~~l~~a~~~~~~~--------------~~~--~~-~~~~~i~~~ 217 (348)
+...|+-+|||-=.....+...... .+.=+|. |+.++.=++.+... ... .. -...+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 3568999999987777766654322 4555554 33333222222110 000 00 002456778
Q ss_pred EcCCCCCC----------CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCC-Cce------e--
Q 018970 218 CVPLQDFT----------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS-GFV------L-- 278 (348)
Q Consensus 218 ~~d~~~~~----------~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~-~~~------~-- 278 (348)
.+|+.+.. +..+.--++++-.++.+++.++...+|+.+.+.. |+|.+++.|.+... .|. +
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~d~fg~~M~~~l~~ 247 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMGDRFGQIMIENLRR 247 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTTSHHHHHHHHHHHT
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCCCHHHHHHHHHHHH
Confidence 88887621 2234456888899999999989999999999876 56666676755322 220 0
Q ss_pred -cCCCCce--ecCHHHHHHHHHhcCCeEEEEeec
Q 018970 279 -DKEDRSI--TRSDFYFKELFSRCGLHIYKSKDQ 309 (348)
Q Consensus 279 -d~~~~~~--~~s~~~l~~l~~~aGf~~v~~~~~ 309 (348)
...-.++ ..+.+...+.|.++||..+.....
T Consensus 248 ~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 248 RQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp TTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred hCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 1111111 247788899999999998775543
No 327
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.06 E-value=0.22 Score=45.61 Aligned_cols=92 Identities=9% Similarity=0.021 Sum_probs=61.0
Q ss_pred CCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC---CC----
Q 018970 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD---FT---- 225 (348)
Q Consensus 155 ~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~---~~---- 225 (348)
+.++.+||-.|| |.|..+..++.....+|+++|.+++.++.+++ +.. .. . .|..+ +.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~----------~~-~--~d~~~~~~~~~~~~ 208 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGF----------DA-A--FNYKTVNSLEEALK 208 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTC----------SE-E--EETTSCSCHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCC----------cE-E--EecCCHHHHHHHHH
Confidence 667889999998 56777777766543379999999998888843 321 01 1 12222 10
Q ss_pred -CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
...+.+|+|+.+-.- ..++.+.++|++||.+++..
T Consensus 209 ~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 209 KASPDGYDCYFDNVGG---------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHCTTCEEEEEESSCH---------HHHHHHHTTEEEEEEEEECC
T ss_pred HHhCCCCeEEEECCCh---------HHHHHHHHHHhcCCEEEEEe
Confidence 011479999865431 24678889999999998754
No 328
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.95 E-value=0.41 Score=44.23 Aligned_cols=95 Identities=15% Similarity=-0.021 Sum_probs=62.2
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcC-CCCCC------C
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFT------P 226 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d-~~~~~------~ 226 (348)
+.++.+||-+|+|. |..+..++......|+++|.+++.++.+++.-.. .+...+ -.++. .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD------------VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS------------EEEECCTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC------------EEEcCcccccHHHHHHHHh
Confidence 67788999999875 7777877765444599999999999988753211 111111 01111 0
Q ss_pred C---CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 227 E---TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ~---~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
. ...+|+|+-+-.- ...++.+.++|+|+|.+++..
T Consensus 234 ~~~~g~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSGN--------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHSSSCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECS
T ss_pred ccccCCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 0 1468999854321 235678889999999998764
No 329
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.89 E-value=0.38 Score=44.47 Aligned_cols=96 Identities=17% Similarity=0.013 Sum_probs=64.0
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------C
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (348)
+.++.+||-+|+|. |.++..+++.... .|+++|.+++.++.+++.-.. .++...-.++. .
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT------------DIINYKNGDIVEQILKAT 231 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC------------EEECGGGSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc------------eEEcCCCcCHHHHHHHHc
Confidence 67888999999986 7788888765443 799999999999988775321 11111111110 1
Q ss_pred CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
....+|+|+-.-.- ...++.+.++|+|||.+++...
T Consensus 232 ~g~g~D~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 232 DGKGVDKVVIAGGD--------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TTCCEEEEEECSSC--------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCCEEEECCCC--------hHHHHHHHHHHhcCCEEEEecc
Confidence 12369999853221 1367788889999999988643
No 330
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.77 E-value=0.53 Score=43.63 Aligned_cols=97 Identities=20% Similarity=0.031 Sum_probs=65.3
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCC--CCCC-----
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL--QDFT----- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~--~~~~----- 225 (348)
+.++.+||-+|+|. |.++..+++.... .|+++|.|++-++.+++. ... .+.+...+. .++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~---------~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE---------VVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT---------CEEEECCSCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh---------cccccccccchHHHHHHHHH
Confidence 67888999999976 7788888766443 599999999999999887 421 122221110 0110
Q ss_pred -CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+-.-.- ...+..+.++|++||.+++..
T Consensus 247 ~t~g~g~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALECTGV--------ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECC
T ss_pred HhCCCCCCEEEECCCC--------hHHHHHHHHHhcCCCEEEEEc
Confidence 112469999864321 246778889999999998864
No 331
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.75 E-value=0.34 Score=45.67 Aligned_cols=100 Identities=9% Similarity=-0.062 Sum_probs=65.3
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CC------
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT------ 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~------ 225 (348)
+.++.+||-+|||. |.++..+++.. ...|+++|.++..++.+++. . .+.+...-.+ +.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-G------------a~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-G------------FEIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-T------------CEEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-C------------CcEEccCCcchHHHHHHHH
Confidence 67888999999876 88888888764 43699999999999988653 1 1111111111 10
Q ss_pred CCCCceeEEeechhhh---------cCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 PETGRYDVIWVQWCIG---------HLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~---------~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+-.-.-. |.+ +....++.+.++|++||.+++..
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHE--APATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSB--CTTHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCCEEEECCCCccccccccccccc--chHHHHHHHHHHHhcCCEEEEec
Confidence 0113699998643321 112 23357888999999999998754
No 332
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.61 E-value=0.3 Score=44.99 Aligned_cols=96 Identities=10% Similarity=0.024 Sum_probs=62.8
Q ss_pred CCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----CC
Q 018970 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (348)
Q Consensus 155 ~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (348)
+.++.+||-+|| |.|..+..++.....+|++++.++..++.+++.+.. . ..+...+..++. ..
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~--------~--~~~d~~~~~~~~~~~~~~~ 222 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF--------D--DAFNYKEESDLTAALKRCF 222 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC--------S--EEEETTSCSCSHHHHHHHC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC--------c--eEEecCCHHHHHHHHHHHh
Confidence 677889999997 568888777765444799999999988888754421 0 111101111111 01
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+.+|+|+.+-. . ..++.+.++|++||.+++..
T Consensus 223 ~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 223 PNGIDIYFENVG-------G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp TTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred CCCCcEEEECCC-------H--HHHHHHHHHHhcCCEEEEEc
Confidence 146999986533 1 36778889999999998854
No 333
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.50 E-value=0.99 Score=46.58 Aligned_cols=47 Identities=15% Similarity=0.098 Sum_probs=38.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC------CCcEEEEcCCHHHHHHHHHHhCC
Q 018970 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAP 202 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~~~~~la~~~------~~~v~~vD~S~~~l~~a~~~~~~ 202 (348)
.+..+|+|+=||.|.++.-|-..+ +.-+.++|+++.+++.-+.++..
T Consensus 210 ~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~ 262 (784)
T 4ft4_B 210 TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ 262 (784)
T ss_dssp CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT
T ss_pred CCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC
Confidence 455789999999999998886655 55689999999999988888654
No 334
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.38 E-value=0.3 Score=44.85 Aligned_cols=95 Identities=11% Similarity=-0.021 Sum_probs=62.9
Q ss_pred CCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----CC
Q 018970 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (348)
Q Consensus 155 ~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (348)
+.++.+||-+|| |.|..+..++.....+|++++.+++.++.+.+.+.. .......-.++. ..
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF-----------DGAIDYKNEDLAAGLKREC 215 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC-----------SEEEETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-----------CEEEECCCHHHHHHHHHhc
Confidence 678889999998 568888887765444799999999988888444321 011111111110 01
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+.+|+|+.+-. . ..+..+.+.|++||.+++..
T Consensus 216 ~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 216 PKGIDVFFDNVG-------G--EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp TTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred CCCceEEEECCC-------c--chHHHHHHHHhhCCEEEEEe
Confidence 246999986433 1 36778889999999998854
No 335
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.32 E-value=0.32 Score=45.24 Aligned_cols=96 Identities=14% Similarity=-0.059 Sum_probs=64.5
Q ss_pred cCCCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------C
Q 018970 154 RNNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (348)
Q Consensus 154 ~~~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (348)
.+.++.+||-+|+|. |..+..+++....+|++++.++..++.+++.-.. .++..+-.++. .
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGAD------------HGINRLEEDWVERVYALT 253 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCC------------EEEcCCcccHHHHHHHHh
Confidence 367889999999886 7778888766444799999999999988764221 11111111111 0
Q ss_pred CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
....+|+|+-+-. . ..+..+.++|+|||.+++...
T Consensus 254 ~g~g~D~vid~~g----~-----~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 254 GDRGADHILEIAG----G-----AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp TTCCEEEEEEETT----S-----SCHHHHHHHEEEEEEEEEECC
T ss_pred CCCCceEEEECCC----h-----HHHHHHHHHhhcCCEEEEEec
Confidence 1236999986543 1 245667789999999998754
No 336
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.18 E-value=0.12 Score=48.45 Aligned_cols=95 Identities=16% Similarity=0.020 Sum_probs=61.9
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcC-CCCCCCCCCcee
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFTPETGRYD 232 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d-~~~~~~~~~~fD 232 (348)
+.++.+||-+|+|. |.++..+++.....|++++.|++.++.+++.-.. .-++....+ +..+. +.+|
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~---------~vi~~~~~~~~~~~~---~g~D 259 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD---------EVVNSRNADEMAAHL---KSFD 259 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS---------EEEETTCHHHHHTTT---TCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---------EEeccccHHHHHHhh---cCCC
Confidence 67788999999985 7788888765444699999999999988763211 001100001 11111 4699
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|+-.-.-. ..++.+.++|+|+|.+++..
T Consensus 260 vvid~~g~~--------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 260 FILNTVAAP--------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEEECCSSC--------CCHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCCH--------HHHHHHHHHhccCCEEEEec
Confidence 998643311 23566788999999988754
No 337
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.02 E-value=0.31 Score=44.31 Aligned_cols=140 Identities=14% Similarity=0.071 Sum_probs=85.0
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCc--EEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC----C
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----T 228 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~--v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~ 228 (348)
.....+++|+=||.|.++..+...++.. |.++|+++..++.-+.++.. ..+...|+.++... .
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~-----------~~~~~~DI~~i~~~~i~~~ 81 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQG-----------KIMYVGDVRSVTQKHIQEW 81 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTT-----------CEEEECCGGGCCHHHHHHT
T ss_pred cCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCC-----------CceeCCChHHccHHHhccc
Confidence 3456789999999999999998888874 69999999999888877643 34667788776521 1
Q ss_pred CceeEEeechh---hhc-------CChh--hHHHHHHHHHHcCCCC-cE----EEEEecccCCCceecCCCCceecCHHH
Q 018970 229 GRYDVIWVQWC---IGH-------LTDD--DFVSFFKRAKVGLKPG-GF----FVLKENIARSGFVLDKEDRSITRSDFY 291 (348)
Q Consensus 229 ~~fD~Ii~~~~---l~~-------~~~~--d~~~~l~~~~~~Lkpg-G~----lii~~~~~~~~~~~d~~~~~~~~s~~~ 291 (348)
+.+|+|+.... +.. +.|+ .+-.-+-++.+.++|. |. +++.||+..-.. .....
T Consensus 82 ~~~Dll~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~ENV~gl~~----------~~~~~ 151 (295)
T 2qrv_A 82 GPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVAMGV----------SDKRD 151 (295)
T ss_dssp CCCSEEEECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEEESSBCH----------HHHHH
T ss_pred CCcCEEEecCCCccccccCccccccccccchhHHHHHHHHHHhCcccccCCccEEEEEcCcchhh----------cCccH
Confidence 36899996422 111 1111 1222333455556775 32 677777653111 01123
Q ss_pred HHHHHHhcCCeEEEEeecCCCCccceE
Q 018970 292 FKELFSRCGLHIYKSKDQKGLPEELFA 318 (348)
Q Consensus 292 l~~l~~~aGf~~v~~~~~~~~~~~l~~ 318 (348)
+.+.++ .++.++...+. + |..--.
T Consensus 152 ~~~~l~-~~~~vl~a~~~-~-PQ~R~R 175 (295)
T 2qrv_A 152 ISRFLE-SNPVMIDAKEV-S-AAHRAR 175 (295)
T ss_dssp HHHHHT-SCCCCEEGGGT-S-SBCCEE
T ss_pred HHHHHh-cCcEEeecceE-C-CccCcE
Confidence 555554 36666655444 4 654333
No 338
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.69 E-value=0.25 Score=50.11 Aligned_cols=133 Identities=16% Similarity=0.152 Sum_probs=77.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhC----------C-C--cEEEEcC---CHHHHHHHHHH-----------hCCCCCCCcC
Q 018970 157 QHLVALDCGSGIGRITKNLLIRY----------F-N--EVDLLEP---VSHFLDAARES-----------LAPENHMAPD 209 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~----------~-~--~v~~vD~---S~~~l~~a~~~-----------~~~~~~~~~~ 209 (348)
+.-+|||+|.|+|.......+.. . . +++.+|. +++.+..+-.. ...+...-.+
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 44689999999999776655432 1 1 5889998 77777643221 1111000000
Q ss_pred --------CCcceeEEEcCCCCCCC--C---CCceeEEeechh-hhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCC
Q 018970 210 --------MHKATNFFCVPLQDFTP--E---TGRYDVIWVQWC-IGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG 275 (348)
Q Consensus 210 --------~~~~i~~~~~d~~~~~~--~---~~~fD~Ii~~~~-l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~ 275 (348)
-...++...+|+.+.-. . ...||+|+.-.. -..-++---..+++.+.++++|||.+.-..
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------ 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC------
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc------
Confidence 01234444555543211 1 357999987331 111111113578999999999999875332
Q ss_pred ceecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 276 FVLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 276 ~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
....+++.+.++||.+....
T Consensus 220 ------------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 ------------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp ------------CCHHHHHHHHHHTCEEEEEE
T ss_pred ------------CcHHHHHHHHhCCeEEEecc
Confidence 11358899999999977644
No 339
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.58 E-value=0.19 Score=51.23 Aligned_cols=133 Identities=15% Similarity=0.096 Sum_probs=77.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhC----------C---CcEEEEcC---CHHHHHHHHH-----------HhCCCCCCCc-
Q 018970 157 QHLVALDCGSGIGRITKNLLIRY----------F---NEVDLLEP---VSHFLDAARE-----------SLAPENHMAP- 208 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~----------~---~~v~~vD~---S~~~l~~a~~-----------~~~~~~~~~~- 208 (348)
+..+|||+|.|+|.......+.. . -+++.+|. +...+..+-. ....+.....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45699999999999877665431 1 16889998 4444443221 1111110000
Q ss_pred -------CCCcceeEEEcCCCCCC--CC---CCceeEEeechh-hhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCC
Q 018970 209 -------DMHKATNFFCVPLQDFT--PE---TGRYDVIWVQWC-IGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG 275 (348)
Q Consensus 209 -------~~~~~i~~~~~d~~~~~--~~---~~~fD~Ii~~~~-l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~ 275 (348)
+-...+++..+|+.+.- .. .+.+|.++.-.. -..-++---..+++.+.++++|||.+.-..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------ 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC------
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc------
Confidence 00124556666765422 11 367999987331 111121113579999999999999865321
Q ss_pred ceecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 276 FVLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 276 ~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
....+++.+.++||.+....
T Consensus 212 ------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 ------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ------------CCHHHHHHHHHTTCEEEEEE
T ss_pred ------------CcHHHHHHHHhCCeEEEecc
Confidence 11358899999999977654
No 340
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.55 E-value=1.5 Score=41.33 Aligned_cols=101 Identities=12% Similarity=-0.055 Sum_probs=61.2
Q ss_pred cCCCCCcEEEEeccc-cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 154 RNNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 154 ~~~~~~~VLDvGcG~-G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
.+.++.+||-+|+|. |.++..+++.... .|+++|.++.-++.+++.-.. .++..+-.++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~i~~~ 277 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD------------HVIDPTKENFVEAVLDY 277 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS------------EEECTTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC------------EEEcCCCCCHHHHHHHH
Confidence 367888999999975 7777877765443 799999999999998765321 11111111110
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+-.-.-.. .....+++.+.+++++||.+++..
T Consensus 278 t~g~g~D~vid~~g~~~---~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 278 TNGLGAKLFLEATGVPQ---LVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp TTTCCCSEEEECSSCHH---HHHHHHHHHHHHCSCCCCEEEECS
T ss_pred hCCCCCCEEEECCCCcH---HHHHHHHHHHHhccCCCcEEEEeC
Confidence 11236999985432110 012233333445559999999864
No 341
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.38 E-value=0.56 Score=43.10 Aligned_cols=93 Identities=17% Similarity=0.088 Sum_probs=61.6
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCC------
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~------ 227 (348)
+.++.+||-+|+|. |..+..++.....+|++++.++..++.+++. .. +. ..|..+-...
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-Ga------------~~-~~d~~~~~~~~~~~~~ 227 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL-GA------------DL-VVNPLKEDAAKFMKEK 227 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TC------------SE-EECTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC-CC------------CE-EecCCCccHHHHHHHH
Confidence 56788999999964 7777777765444799999999999888752 21 01 1222211100
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+.+|+|+.+-.. ...++.+.++|+++|.+++..
T Consensus 228 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 228 VGGVHAAVVTAVS--------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp HSSEEEEEESSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred hCCCCEEEECCCC--------HHHHHHHHHHhhcCCEEEEec
Confidence 0369999864331 245678889999999998754
No 342
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.16 E-value=0.6 Score=42.89 Aligned_cols=96 Identities=13% Similarity=-0.030 Sum_probs=61.4
Q ss_pred cCCCCCcEEEEecc--ccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 154 RNNQHLVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 154 ~~~~~~~VLDvGcG--~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
.+.++.+||-+||| .|..+..++.....+|++++.++..++.+++.-.. ......-.++.
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~------------~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA------------YVIDTSTAPLYETVMEL 208 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS------------EEEETTTSCHHHHHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc------------EEEeCCcccHHHHHHHH
Confidence 36788999999987 67787777765333799999999999988874221 11111111111
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.....+|+|+-+-.-. .+....++|++||.+++...
T Consensus 209 ~~~~g~Dvvid~~g~~---------~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 209 TNGIGADAAIDSIGGP---------DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp TTTSCEEEEEESSCHH---------HHHHHHHTEEEEEEEEECCC
T ss_pred hCCCCCcEEEECCCCh---------hHHHHHHHhcCCCEEEEEee
Confidence 1124799998643321 12334479999999988653
No 343
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.93 E-value=1.2 Score=41.35 Aligned_cols=96 Identities=15% Similarity=-0.002 Sum_probs=62.8
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEc-CC-CCCC-----
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~-~~~~----- 225 (348)
+.++.+||-+|+|. |.++..+++.... .|+++|.|++.++.+++.-.. .++.. +. .++.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT------------DFVNPNDHSEPISQVLSK 257 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc------------eEEeccccchhHHHHHHH
Confidence 67788999999875 7778888765443 699999999999988753211 11111 10 1110
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCC-cEEEEEec
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKEN 270 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~Lkpg-G~lii~~~ 270 (348)
...+.+|+|+-+-.- ...++.+.++|++| |.+++...
T Consensus 258 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 258 MTNGGVDFSLECVGN--------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HhCCCCCEEEECCCC--------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 011368999854321 24678889999999 99987643
No 344
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.78 E-value=0.099 Score=48.35 Aligned_cols=96 Identities=15% Similarity=-0.061 Sum_probs=62.1
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhC--CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEE-cCC-CCCCCCCC
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPL-QDFTPETG 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~--~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~-~d~-~~~~~~~~ 229 (348)
+ ++.+||-+|+|. |.++..+++.. ..+|++++.|++.++.+++.-... -+++.. .+. ..+. ...
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~---------vi~~~~~~~~~~~~~-~g~ 237 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADY---------VSEMKDAESLINKLT-DGL 237 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSE---------EECHHHHHHHHHHHH-TTC
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCE---------EeccccchHHHHHhh-cCC
Confidence 5 778999999975 77777777654 336999999999999887642210 011100 110 0111 123
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+|+|+-.-.- ...++.+.++|+|||.+++..
T Consensus 238 g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 238 GASIAIDLVGT--------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp CEEEEEESSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CccEEEECCCC--------hHHHHHHHHHhhcCCEEEEeC
Confidence 69999864331 236778889999999988754
No 345
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.75 E-value=0.35 Score=46.28 Aligned_cols=44 Identities=20% Similarity=0.438 Sum_probs=35.1
Q ss_pred CCcEEEEeccccHHHHHHHHhC------CCcEEEEcCCHHHHHHHHHHhC
Q 018970 158 HLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLA 201 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~~------~~~v~~vD~S~~~l~~a~~~~~ 201 (348)
+.+|+|+|+|+|.++..++... ..+++.||+|+.+.+.-++.+.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 4689999999999988887431 2379999999998877776654
No 346
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.71 E-value=0.29 Score=45.17 Aligned_cols=94 Identities=12% Similarity=0.006 Sum_probs=62.2
Q ss_pred CCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCC---CCC----
Q 018970 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ---DFT---- 225 (348)
Q Consensus 155 ~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~---~~~---- 225 (348)
+.++.+||.+|+ |.|..+..++......|++++.++..++.+++. .. . .. .|.. ++.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~-g~----------~-~~--~d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI-GG----------E-VF--IDFTKEKDIVGAVL 232 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT-TC----------C-EE--EETTTCSCHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc-CC----------c-eE--EecCccHhHHHHHH
Confidence 677889999998 568777777765434799999988888877653 11 0 11 1322 111
Q ss_pred -CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
...+.+|+|+.+-.. ...++.+.+.|++||.+++...
T Consensus 233 ~~~~~~~D~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 233 KATDGGAHGVINVSVS--------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHTSCEEEEEECSSC--------HHHHHHHTTSEEEEEEEEECCC
T ss_pred HHhCCCCCEEEECCCc--------HHHHHHHHHHHhcCCEEEEEeC
Confidence 001269999865431 2467888999999999987643
No 347
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.64 E-value=0.6 Score=43.47 Aligned_cols=95 Identities=13% Similarity=-0.101 Sum_probs=62.6
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEc-CC-CCCC-----
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~-~~~~----- 225 (348)
+.++.+||-+|+|. |.++..+++. +...|+++|.|+..++.+++.-.. .++.. +. .++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT------------ECLNPKDYDKPIYEVICE 256 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc------------EEEecccccchHHHHHHH
Confidence 67788999999875 7777777765 443699999999999988753211 11111 10 1110
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCC-cEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~Lkpg-G~lii~~ 269 (348)
...+.+|+|+-.-.- ...+..+.++|+++ |.+++..
T Consensus 257 ~t~gg~Dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 257 KTNGGVDYAVECAGR--------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCCCEEEECCCC--------HHHHHHHHHHHhcCCCEEEEEc
Confidence 112479999854321 24677888999999 9998754
No 348
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.59 E-value=0.5 Score=43.54 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=61.4
Q ss_pred CCCCCcEEEEecc--ccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC----C-C
Q 018970 155 NNQHLVALDCGSG--IGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----T-P 226 (348)
Q Consensus 155 ~~~~~~VLDvGcG--~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~-~ 226 (348)
+.++.+||-.|+| .|..+..++... ..+|+++|.++..++.+++.-.. .+....-.++ . .
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD------------YVINASMQDPLAEIRRI 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCC------------EEecCCCccHHHHHHHH
Confidence 6678899999998 566666666553 33699999999999888653111 1111110111 0 1
Q ss_pred CC-CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 227 ET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ~~-~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.. +.+|+|+.+-.- ...++.+.++|+|+|.+++..
T Consensus 236 ~~~~~~d~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS--------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTTSCEEEEEESCCC--------HHHHTTGGGGEEEEEEEEECC
T ss_pred hcCCCceEEEECCCC--------HHHHHHHHHHHhcCCEEEEEC
Confidence 11 479999864331 246778889999999998754
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.56 E-value=1.6 Score=40.19 Aligned_cols=94 Identities=16% Similarity=0.046 Sum_probs=61.5
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------C
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (348)
+ ++.+||-+|+|. |..+..++..... +|++++.+++.++.+++.-.. .+...+-.++. .
T Consensus 166 ~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~v~~~~ 232 (348)
T 2d8a_A 166 I-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGAD------------YVINPFEEDVVKEVMDIT 232 (348)
T ss_dssp C-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCS------------EEECTTTSCHHHHHHHHT
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC------------EEECCCCcCHHHHHHHHc
Confidence 5 788999999974 7777777765433 699999999998888754211 11111111110 0
Q ss_pred CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
....+|+|+.+-.. ...++.+.++|+++|.+++..
T Consensus 233 ~g~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 233 DGNGVDVFLEFSGA--------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TTSCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEc
Confidence 11369999864331 245678889999999988754
No 350
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.55 E-value=0.31 Score=44.80 Aligned_cols=88 Identities=16% Similarity=0.139 Sum_probs=54.8
Q ss_pred ceeEEEcCCCC-CC-CCCCceeEEeechhhhcCCh------------hhHHHHHHHHHHcCCCCcEEEEEeccc-CCCce
Q 018970 213 ATNFFCVPLQD-FT-PETGRYDVIWVQWCIGHLTD------------DDFVSFFKRAKVGLKPGGFFVLKENIA-RSGFV 277 (348)
Q Consensus 213 ~i~~~~~d~~~-~~-~~~~~fD~Ii~~~~l~~~~~------------~d~~~~l~~~~~~LkpgG~lii~~~~~-~~~~~ 277 (348)
...++++|..+ +. .++++||+|++........+ ..+...++.+.++|+|||.+++..... ..+..
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~ 93 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVP 93 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCc
Confidence 46777777654 22 34578999999766543210 146788999999999999998864321 00000
Q ss_pred ecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 278 LDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 278 ~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
+ ........+.++++..||....
T Consensus 94 ~-----~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 94 A-----RSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp E-----ECCHHHHHHHHHHHTTCCEEEE
T ss_pred c-----cccchHHHHHHHHHhCCCEEEE
Confidence 0 0011233456678899998765
No 351
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=90.38 E-value=0.86 Score=42.37 Aligned_cols=95 Identities=15% Similarity=-0.011 Sum_probs=62.6
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEc-CC-CCCC-----
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~-~~~~----- 225 (348)
+.++.+||-+|+|. |.++..+++. +...|+++|.|++.++.+++.-.. .++.. +. .++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT------------ECINPQDFSKPIQEVLIE 255 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc------------eEeccccccccHHHHHHH
Confidence 67788999999875 7777777765 443699999999999988754211 11111 10 1110
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCC-cEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~Lkpg-G~lii~~ 269 (348)
...+.+|+|+-.-.- ...++.+.++|+++ |.+++..
T Consensus 256 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 256 MTDGGVDYSFECIGN--------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCc--------HHHHHHHHHhhccCCcEEEEEe
Confidence 112369999854321 24678889999999 9998754
No 352
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=90.26 E-value=2.4 Score=46.31 Aligned_cols=149 Identities=17% Similarity=0.094 Sum_probs=91.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCC------------C-
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL------------Q- 222 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~------------~- 222 (348)
...+++|+=||.|.++..+...++ ..+.++|+++.+++.-+.++.. ..++..|+ .
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~-----------~~~~~~DI~~l~~~~~~gdi~~ 918 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPG-----------TTVFTEDCNVLLKLVMAGEVTN 918 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTT-----------SEEECSCHHHHHHHHTTTCSBC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC-----------CcEeeccHHHHhHhhhccchhh
Confidence 456899999999999999987786 5689999999999988888653 12222222 1
Q ss_pred ----CCCCCCCceeEEeechhhhcCCh---------hh----HHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCce
Q 018970 223 ----DFTPETGRYDVIWVQWCIGHLTD---------DD----FVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSI 285 (348)
Q Consensus 223 ----~~~~~~~~fD~Ii~~~~l~~~~~---------~d----~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~ 285 (348)
.++. .+.+|+|+.......+.- ++ +..-+-++.+.++| .+++.||+.. + ......
T Consensus 919 ~~~~~lp~-~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rP--k~fv~ENV~g--l-ls~~~g-- 990 (1330)
T 3av4_A 919 SLGQRLPQ-KGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRP--RFFLLENVRN--F-VSYRRS-- 990 (1330)
T ss_dssp SSCCBCCC-TTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCC--SEEEEEEEGG--G-GTTTTT--
T ss_pred hhhhhccc-cCccceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcC--cEEEEeccHH--H-hccCcc--
Confidence 1221 257899996433332211 11 11123344455678 4777787753 1 111111
Q ss_pred ecCHHHHHHHHHhcCCeEEEEee---cCCCCccceEEEEEEEe
Q 018970 286 TRSDFYFKELFSRCGLHIYKSKD---QKGLPEELFAVKMYALT 325 (348)
Q Consensus 286 ~~s~~~l~~l~~~aGf~~v~~~~---~~~~~~~l~~v~~~~l~ 325 (348)
.....+.+.|++.||.+..... ..+.|..--.+.+.+.+
T Consensus 991 -~~~~~il~~L~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r 1032 (1330)
T 3av4_A 991 -MVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1032 (1330)
T ss_dssp -HHHHHHHHHHHHHTCEEEEEEEEGGGGSCSBCCEEEEEEEEC
T ss_pred -HHHHHHHHHHHhcCCeeeEEEecHHHcCCCccccEEEEEEec
Confidence 1235677888999999766432 34677766666666654
No 353
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.21 E-value=0.91 Score=41.48 Aligned_cols=95 Identities=19% Similarity=0.112 Sum_probs=62.6
Q ss_pred cCCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 154 ~~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
.+.++.+||-+|+ |.|..+..++.....+|++++.+++.++.+++.-.. .+...+-.++.
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~~~~~~~~~~~~~~~~~ 212 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAE------------YLINASKEDILRQVLKF 212 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc------------EEEeCCCchHHHHHHHH
Confidence 3678889999994 467788877766444799999999999888763211 11111111111
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+-+-.- ..++.+.++|+|||.+++..
T Consensus 213 ~~~~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 213 TNGKGVDASFDSVGK---------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp TTTSCEEEEEECCGG---------GGHHHHHHHEEEEEEEEECC
T ss_pred hCCCCceEEEECCCh---------HHHHHHHHHhccCCEEEEEc
Confidence 112469999865431 24667788999999998864
No 354
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.17 E-value=0.41 Score=44.05 Aligned_cols=95 Identities=15% Similarity=-0.018 Sum_probs=64.6
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----C-
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P- 226 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~- 226 (348)
+.++.+||-+|+|. |.++..+++.. ...|+++|.+++-++.+++.-.. .+...+ .++. .
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~------------~~i~~~-~~~~~~v~~~t 235 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD------------AAVKSG-AGAADAIRELT 235 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS------------EEEECS-TTHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC------------EEEcCC-CcHHHHHHHHh
Confidence 57788999999986 78888888654 55799999999999988764221 111111 1111 0
Q ss_pred CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
....+|+|+-.-.- ...++.+.++|++||.+++...
T Consensus 236 ~g~g~d~v~d~~G~--------~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 236 GGQGATAVFDFVGA--------QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GGGCEEEEEESSCC--------HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCeEEEECCCC--------HHHHHHHHHHHhcCCEEEEECC
Confidence 11269999863321 2467888999999999998643
No 355
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.16 E-value=1.6 Score=40.60 Aligned_cols=96 Identities=13% Similarity=-0.076 Sum_probs=62.8
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEc-CC-CCCC-----
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~-~~~~----- 225 (348)
+.++.+||-+|+|. |.++..+++.... .|+++|.+++.++.+++.-.. .++.. +. .++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT------------DCLNPRELDKPVQDVITE 260 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc------------EEEccccccchHHHHHHH
Confidence 67788999999875 7778888766443 799999999999988753211 11111 10 1110
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCC-cEEEEEec
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKEN 270 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~Lkpg-G~lii~~~ 270 (348)
...+.+|+|+-.-.- ...++.+.++|++| |.+++...
T Consensus 261 ~~~~g~Dvvid~~G~--------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 261 LTAGGVDYSLDCAGT--------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHTSCBSEEEESSCC--------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HhCCCccEEEECCCC--------HHHHHHHHHHhhcCCCEEEEECC
Confidence 011369999853321 24678889999999 99987543
No 356
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.16 E-value=0.75 Score=42.83 Aligned_cols=95 Identities=13% Similarity=-0.056 Sum_probs=62.1
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEc-CC-CCCC-----
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~-~~~~----- 225 (348)
+.++.+||-+|+|. |.++..+++.... .|+++|.++..++.+++.-.. .++.. +. .++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT------------ECVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc------------eEecccccchhHHHHHHH
Confidence 67788999999876 7777777765443 699999999999988753211 11111 10 1110
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCC-cEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~Lkpg-G~lii~~ 269 (348)
...+.+|+|+-.-.- ...++.+.++|++| |.+++..
T Consensus 257 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 257 MSNGGVDFSFEVIGR--------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HhCCCCcEEEECCCC--------HHHHHHHHHHhhcCCcEEEEec
Confidence 112369999854321 24577888999999 9998754
No 357
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.07 E-value=0.95 Score=41.58 Aligned_cols=93 Identities=11% Similarity=-0.001 Sum_probs=62.5
Q ss_pred cCCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 154 ~~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
.+.++.+||-+|+ |.|..+..++.....+|++++.++..++.+++. .. . .+ .|..+..
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-ga--------~---~~--~d~~~~~~~~~~~ 228 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL-GA--------D---ET--VNYTHPDWPKEVR 228 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TC--------S---EE--EETTSTTHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CC--------C---EE--EcCCcccHHHHHH
Confidence 3677889999998 578888888765444799999999999888753 21 0 11 1221111
Q ss_pred --CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 --PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 --~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+.+-. . ..++.+.++|+++|.+++..
T Consensus 229 ~~~~~~~~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 229 RLTGGKGADKVVDHTG-A--------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp HHTTTTCEEEEEESSC-S--------SSHHHHHHHEEEEEEEEESS
T ss_pred HHhCCCCceEEEECCC-H--------HHHHHHHHhhccCCEEEEEe
Confidence 11246999986544 1 24567788899999988754
No 358
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=89.89 E-value=1.1 Score=40.77 Aligned_cols=91 Identities=12% Similarity=0.026 Sum_probs=60.4
Q ss_pred cEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-CCCCCceeEEee
Q 018970 160 VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIWV 236 (348)
Q Consensus 160 ~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~Ii~ 236 (348)
+||-+|+ |.|..+..+++....+|++++.|++-++.+++.-.+ ..+...+.... ....+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-----------~vi~~~~~~~~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGAN-----------RILSRDEFAESRPLEKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCS-----------EEEEGGGSSCCCSSCCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC-----------EEEecCCHHHHHhhcCCCccEEEE
Confidence 4999997 468888888876444799999999999999774221 11111111111 112357999875
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+- . . ..+..+.++|+|+|.+++...
T Consensus 218 ~~-----g--~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 218 TV-----G--D--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp SS-----C--H--HHHHHHHHTEEEEEEEEECCC
T ss_pred CC-----C--c--HHHHHHHHHHhcCCEEEEEec
Confidence 32 2 1 278889999999999988643
No 359
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=89.84 E-value=0.86 Score=41.52 Aligned_cols=95 Identities=12% Similarity=0.013 Sum_probs=62.4
Q ss_pred CCCCCcEEEEe-c-cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------C
Q 018970 155 NNQHLVALDCG-S-GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (348)
Q Consensus 155 ~~~~~~VLDvG-c-G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (348)
+.++.+||-+| + |.|..+..++.....+|++++.+++.++.+++.-.. ......-.++. .
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAW------------ETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEEeCCCccHHHHHHHHh
Confidence 67888999999 3 458888877765333799999999999988764211 11111111110 1
Q ss_pred CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
....+|+|+.+-.- ..+..+.++|++||.+++...
T Consensus 206 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQ---------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp TTCCEEEEEESSCG---------GGHHHHHTTEEEEEEEEECCC
T ss_pred CCCCceEEEECCCh---------HHHHHHHHHhcCCCEEEEEec
Confidence 12469999864331 245678889999999998643
No 360
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=89.82 E-value=1.9 Score=40.94 Aligned_cols=159 Identities=10% Similarity=0.012 Sum_probs=90.1
Q ss_pred CcEEEEeccccHHHHHHHHhC--CCc----EEEEcCCHHHHHHHHHHhCCCCCCCc------------CCCcc-------
Q 018970 159 LVALDCGSGIGRITKNLLIRY--FNE----VDLLEPVSHFLDAARESLAPENHMAP------------DMHKA------- 213 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~~--~~~----v~~vD~S~~~l~~a~~~~~~~~~~~~------------~~~~~------- 213 (348)
.+|||+=||.|.+...+...+ +.- |.++|+++.+++.-+.++........ +....
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~ 90 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIK 90 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccccc
Confidence 589999999999999887766 344 88899999999988888765311000 00000
Q ss_pred -------eeE---------EEcCCCCCCCC--CCceeEEeechhhhcCC---------h---h--h-HHHHHHHHHH---
Q 018970 214 -------TNF---------FCVPLQDFTPE--TGRYDVIWVQWCIGHLT---------D---D--D-FVSFFKRAKV--- 257 (348)
Q Consensus 214 -------i~~---------~~~d~~~~~~~--~~~fD~Ii~~~~l~~~~---------~---~--d-~~~~l~~~~~--- 257 (348)
-.+ ...|+.++... ++.+|+++.......+. + . . +..+++-+..
T Consensus 91 ~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag~~~g~~d~~~~r~~L~~~~~rii~~~~~ 170 (403)
T 4dkj_A 91 KINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQKGIDKELNTRSGLLWEIERILEEIKN 170 (403)
T ss_dssp HHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTSCCCCCCGGGCCSGGGHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhCCCCCCCccccccchhHHHHHHHHHHhhh
Confidence 000 23455544321 14579999754433221 1 0 1 2223333322
Q ss_pred ----cCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEee---cCCCCccceEEEEEEEe
Q 018970 258 ----GLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSKD---QKGLPEELFAVKMYALT 325 (348)
Q Consensus 258 ----~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~~---~~~~~~~l~~v~~~~l~ 325 (348)
.++| .+++.||+..-.. ......-..+.+.|++.||.+..... ..+.|..--.+.+.+.+
T Consensus 171 k~~~~~~P--k~~l~ENV~gl~~------~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r 237 (403)
T 4dkj_A 171 SFSKEEMP--KYLLMENVKNLLS------HKNKKNYNTWLKQLEKFGYKSKTYLLNSKNFDNCQNRERVFCLSIR 237 (403)
T ss_dssp HSCGGGSC--SEEEEEEEGGGGS------HHHHHHHHHHHHHHHHTTEEEEEEEEEGGGTTCSBCCEEEEEEEEE
T ss_pred hhccccCC--CEEEEecchhhhh------hccchHHHHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEc
Confidence 1567 5677777643110 00011235678889999998766443 34567665566665654
No 361
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=89.77 E-value=1 Score=42.04 Aligned_cols=96 Identities=15% Similarity=-0.009 Sum_probs=63.3
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcC--CCCCC-----
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP--LQDFT----- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d--~~~~~----- 225 (348)
+.++.+||-+|+|. |.++..+++. +...|+++|.+++-++.+++.-.. .++... -.++.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~i~~ 258 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN------------EFVNPKDHDKPIQEVIVD 258 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc------------EEEccccCchhHHHHHHH
Confidence 67888999999975 7778877765 444799999999999988653211 111110 01110
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCC-cEEEEEec
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKEN 270 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~Lkpg-G~lii~~~ 270 (348)
...+.+|+|+-.-. -...++.+.++|++| |.+++...
T Consensus 259 ~~~gg~D~vid~~g--------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 259 LTDGGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HTTSCBSEEEECSC--------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred hcCCCCCEEEECCC--------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 11247999986432 124678889999997 99988643
No 362
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.74 E-value=1.8 Score=40.11 Aligned_cols=94 Identities=13% Similarity=0.060 Sum_probs=62.0
Q ss_pred CCCcEEEEe-cc-ccHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEE---EcCCCCCCCCCCc
Q 018970 157 QHLVALDCG-SG-IGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF---CVPLQDFTPETGR 230 (348)
Q Consensus 157 ~~~~VLDvG-cG-~G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~---~~d~~~~~~~~~~ 230 (348)
++.+||-+| +| .|.++..+++. +..+|++++.+++-++.+++.-.+. -++.. ...+.++ ..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~---------vi~~~~~~~~~v~~~--~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHH---------VIDHSKPLAAEVAAL--GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSE---------EECTTSCHHHHHHTT--CSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCE---------EEeCCCCHHHHHHHh--cCCC
Confidence 678999998 55 48888888876 4557999999999999887632110 00000 0001111 2357
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|+|+-+-. -...+..+.++|+|||.+++..
T Consensus 240 ~Dvvid~~g--------~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 240 PAFVFSTTH--------TDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp EEEEEECSC--------HHHHHHHHHHHSCTTCEEEECS
T ss_pred ceEEEECCC--------chhhHHHHHHHhcCCCEEEEEC
Confidence 999986322 1246788899999999998863
No 363
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.34 E-value=0.97 Score=41.13 Aligned_cols=93 Identities=13% Similarity=0.006 Sum_probs=61.0
Q ss_pred CCCCCcEEEEe--ccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-------
Q 018970 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (348)
Q Consensus 155 ~~~~~~VLDvG--cG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (348)
+.++.+||-.| +|.|..+..++.....+|++++.+++.++.+++.-.. ... |..+..
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~------------~~~--~~~~~~~~~~~~~ 203 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW------------QVI--NYREEDLVERLKE 203 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS------------EEE--ETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC------------EEE--ECCCccHHHHHHH
Confidence 67788999999 4567777776654333699999999888888763111 111 221111
Q ss_pred -CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.....+|+|+.+-. . ..++.+.++|++||.+++...
T Consensus 204 ~~~~~~~D~vi~~~g-~--------~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG-R--------DTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HTTTCCEEEEEECSC-G--------GGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCc-h--------HHHHHHHHHhcCCCEEEEEec
Confidence 11236999986543 1 346778889999999987643
No 364
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.32 E-value=0.74 Score=42.35 Aligned_cols=94 Identities=13% Similarity=0.043 Sum_probs=63.1
Q ss_pred cCCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 154 ~~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
.+.++.+||-+|+ |.|..+..++.....+|++++.+++.++.+++.-.. .+...+ .++.
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~v~~~~-~~~~~~v~~~ 222 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGAD------------IVLPLE-EGWAKAVREA 222 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS------------EEEESS-TTHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc------------EEecCc-hhHHHHHHHH
Confidence 3678889999997 568888888766444799999999999888774221 112222 2211
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+-+-.- ..+..+.++|++||.+++..
T Consensus 223 ~~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 223 TGGAGVDMVVDPIGG---------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTTSCEEEEEESCC-----------CHHHHHHTEEEEEEEEEC-
T ss_pred hCCCCceEEEECCch---------hHHHHHHHhhcCCCEEEEEE
Confidence 112369999864331 24667888999999998854
No 365
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.03 E-value=0.62 Score=42.86 Aligned_cols=91 Identities=16% Similarity=0.084 Sum_probs=59.7
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC--CC-----
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD--FT----- 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~----- 225 (348)
+ ++.+||-+|+|. |..+..++..... .|++++.+++.++.+++. .. .+ .|..+ +.
T Consensus 163 ~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~------------~v--~~~~~~~~~~~~~~ 226 (343)
T 2dq4_A 163 V-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD------------RL--VNPLEEDLLEVVRR 226 (343)
T ss_dssp C-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS------------EE--ECTTTSCHHHHHHH
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH------------hc--cCcCccCHHHHHHH
Confidence 5 788999999864 7777777765443 699999998887766543 21 01 12111 10
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+-.-.- ...++.+.++|+++|.+++..
T Consensus 227 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 227 VTGSGVEVLLEFSGN--------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp HHSSCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred hcCCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 002369999854321 245678889999999988754
No 366
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.98 E-value=1.5 Score=40.53 Aligned_cols=92 Identities=12% Similarity=0.020 Sum_probs=60.7
Q ss_pred CCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-------
Q 018970 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (348)
Q Consensus 155 ~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (348)
+.++.+||-.|+ |.|..+..++......|++++.+++.++.+++.-.. .. .|..+..
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~~--~d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH------------EV--FNHREVNYIDKIKK 233 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EE--EETTSTTHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC------------EE--EeCCCchHHHHHHH
Confidence 677889999997 567777777765444799999999988877653111 11 1221111
Q ss_pred -CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+.+-.- ..+..+.++|++||.+++..
T Consensus 234 ~~~~~~~D~vi~~~G~---------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 234 YVGEKGIDIIIEMLAN---------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHCTTCEEEEEESCHH---------HHHHHHHHHEEEEEEEEECC
T ss_pred HcCCCCcEEEEECCCh---------HHHHHHHHhccCCCEEEEEe
Confidence 012369999865431 24567789999999998754
No 367
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=88.96 E-value=1.6 Score=40.88 Aligned_cols=115 Identities=11% Similarity=0.037 Sum_probs=71.2
Q ss_pred hhhhHHHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcce
Q 018970 135 IKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKAT 214 (348)
Q Consensus 135 ~~~~~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i 214 (348)
++...++|.+.+... ..+.+||.|+.+.|.++..++... ++.+.-|--.....+.++...++. ...+
T Consensus 22 ~da~d~~ll~~~~~~------~~~~~~~~~~d~~gal~~~~~~~~---~~~~~ds~~~~~~~~~n~~~~~~~----~~~~ 88 (375)
T 4dcm_A 22 WEAADEYLLQQLDDT------EIRGPVLILNDAFGALSCALAEHK---PYSIGDSYISELATRENLRLNGID----ESSV 88 (375)
T ss_dssp CCHHHHHHHHTTTTC------CCCSCEEEECCSSSHHHHHTGGGC---CEEEESCHHHHHHHHHHHHHTTCC----GGGS
T ss_pred cchHHHHHHHhhhhc------cCCCCEEEECCCCCHHHHhhccCC---ceEEEhHHHHHHHHHHHHHHcCCC----ccce
Confidence 445556666554432 244689999999999998886442 445543544444555555443331 1234
Q ss_pred eEEEcCCCCCCCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 215 NFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 215 ~~~~~d~~~~~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
++... +++. .+.||+|+....=+ ...+...|..+...|+||+.+++..
T Consensus 89 ~~~~~-~~~~---~~~~~~v~~~lpk~---~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 89 KFLDS-TADY---PQQPGVVLIKVPKT---LALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp EEEET-TSCC---CSSCSEEEEECCSC---HHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred Eeccc-cccc---ccCCCEEEEEcCCC---HHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 44432 2332 36799998754411 1357788999999999999987764
No 368
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=88.89 E-value=2.8 Score=32.86 Aligned_cols=93 Identities=13% Similarity=0.017 Sum_probs=56.0
Q ss_pred CCcEEEEeccc-cHH-HHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCCce
Q 018970 158 HLVALDCGSGI-GRI-TKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (348)
Q Consensus 158 ~~~VLDvGcG~-G~~-~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~f 231 (348)
..+|+=+|||. |.. +..|...+. .|+++|.+++.++.+++. .+.+..+|..+.. ..-..+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~-------------g~~~i~gd~~~~~~l~~a~i~~a 72 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER-------------GVRAVLGNAANEEIMQLAHLECA 72 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------------TCEEEESCTTSHHHHHHTTGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc-------------CCCEEECCCCCHHHHHhcCcccC
Confidence 35899999985 443 333333455 599999999998887652 2456677765532 112468
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|+|++...- +.....+-...+.+.|+..++...
T Consensus 73 d~vi~~~~~-----~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 73 KWLILTIPN-----GYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp SEEEECCSC-----HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred CEEEEECCC-----hHHHHHHHHHHHHHCCCCeEEEEE
Confidence 888864321 111222334556677887766644
No 369
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=88.79 E-value=0.77 Score=42.11 Aligned_cols=48 Identities=8% Similarity=-0.071 Sum_probs=40.7
Q ss_pred CCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCC
Q 018970 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE 203 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~ 203 (348)
..++..|||.=||+|..+......+. .++++|+++.+++.+++++...
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCS
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhc
Confidence 35778999999999999987665554 6999999999999999998753
No 370
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.63 E-value=1.2 Score=41.21 Aligned_cols=94 Identities=12% Similarity=-0.001 Sum_probs=62.2
Q ss_pred CCCCCcEEEEe--ccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----CC
Q 018970 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (348)
Q Consensus 155 ~~~~~~VLDvG--cG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (348)
+.++.+||-+| .|.|..+..++.....+|++++.+++.++.+++. .. ..+...+-.++. ..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-Ga-----------~~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL-GC-----------DRPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TC-----------SEEEETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc-CC-----------cEEEecCChhHHHHHHHhc
Confidence 56788999999 4568888888766444799999999888888763 21 011111111110 01
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+.+|+|+-+-. . ..++.+.++|+++|.+++..
T Consensus 229 ~~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 229 PEGVDVVYESVG-------G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TTCEEEEEECSC-------T--HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC-------H--HHHHHHHHHHhcCCEEEEEe
Confidence 246999986533 1 36778889999999988764
No 371
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=88.54 E-value=0.63 Score=42.19 Aligned_cols=90 Identities=17% Similarity=0.093 Sum_probs=59.6
Q ss_pred cCCCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCcee
Q 018970 154 RNNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (348)
Q Consensus 154 ~~~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD 232 (348)
.+.++.+||-+|+|. |.++..+++....+|++++ |++-++.+++.-.. .+. .|.+.+ .+.+|
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~v~-~d~~~v---~~g~D 201 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVR------------HLY-REPSQV---TQKYF 201 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEE------------EEE-SSGGGC---CSCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCC------------EEE-cCHHHh---CCCcc
Confidence 477889999999974 7788888765433799999 99999988764211 111 132222 36799
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|+-+-.- ..+..+.++|+|+|.+++..
T Consensus 202 vv~d~~g~---------~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 202 AIFDAVNS---------QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEECC----------------TTGGGEEEEEEEEEEC
T ss_pred EEEECCCc---------hhHHHHHHHhcCCCEEEEEe
Confidence 99864321 12256788999999998863
No 372
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=88.45 E-value=1.2 Score=41.05 Aligned_cols=93 Identities=8% Similarity=-0.062 Sum_probs=61.4
Q ss_pred CCCC--CcEEEEec--cccHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----
Q 018970 155 NNQH--LVALDCGS--GIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (348)
Q Consensus 155 ~~~~--~~VLDvGc--G~G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---- 225 (348)
+.++ .+||-.|+ |.|..+..++..... +|++++.+++.++.+++.+.. . .. .|..+-.
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~--------~---~~--~d~~~~~~~~~ 222 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF--------D---AA--INYKKDNVAEQ 222 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC--------S---EE--EETTTSCHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC--------c---eE--EecCchHHHHH
Confidence 5667 89999997 567777777765444 799999999888887764421 0 11 1222111
Q ss_pred ---CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 ---PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ---~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
...+.+|+|+.+-. . ..++.+.++|++||.+++..
T Consensus 223 ~~~~~~~~~d~vi~~~G-------~--~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 223 LRESCPAGVDVYFDNVG-------G--NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHHCTTCEEEEEESCC-------H--HHHHHHHHTEEEEEEEEECC
T ss_pred HHHhcCCCCCEEEECCC-------H--HHHHHHHHHhccCcEEEEEC
Confidence 01126999986543 1 45778889999999998754
No 373
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.01 E-value=2.1 Score=39.43 Aligned_cols=96 Identities=17% Similarity=0.038 Sum_probs=61.0
Q ss_pred cCCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 154 ~~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
.+.++.+||-.|+ |.|..+..++......|++++.+++.++.+++.-.. .....+-.++.
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA------------AGFNYKKEDFSEATLKF 226 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc------------EEEecCChHHHHHHHHH
Confidence 3677889999984 567777777765444799999999998888543111 11111111110
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.....+|+|+.+-.- ..+..+.++|++||.+++...
T Consensus 227 ~~~~~~d~vi~~~G~---------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 227 TKGAGVNLILDCIGG---------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp TTTSCEEEEEESSCG---------GGHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCceEEEECCCc---------hHHHHHHHhccCCCEEEEEec
Confidence 112369999865431 135667788999999988643
No 374
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.00 E-value=2.2 Score=38.91 Aligned_cols=89 Identities=13% Similarity=0.020 Sum_probs=58.7
Q ss_pred CcEEEEeccc--cHHHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CCCCCCceeEE
Q 018970 159 LVALDCGSGI--GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYDVI 234 (348)
Q Consensus 159 ~~VLDvGcG~--G~~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~I 234 (348)
.+|.=||+|. |.++..+...+.. .|+++|.+++.++.+.+.- . +.-...++.+ .. ...|+|
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G----~--------~~~~~~~~~~~~~---~~aDvV 98 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----I--------IDEGTTSIAKVED---FSPDFV 98 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----S--------CSEEESCTTGGGG---GCCSEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC----C--------cchhcCCHHHHhh---ccCCEE
Confidence 5899999985 3456666666663 6999999998888776431 1 1112234433 21 357999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
+.+-.. .....+++++...|+||.+++-
T Consensus 99 ilavp~-----~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 99 MLSSPV-----RTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp EECSCG-----GGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEeCCH-----HHHHHHHHHHhhccCCCcEEEE
Confidence 875443 3456788899999999876653
No 375
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=87.67 E-value=3.2 Score=37.80 Aligned_cols=96 Identities=15% Similarity=0.007 Sum_probs=61.0
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------C
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (348)
..++.+||-.|+|. |.++..+++. +...++++|.+++-++.+++.=.. .++...-.+.. .
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~------------~~i~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM------------QTFNSSEMSAPQMQSVLR 225 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHG
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCe------------EEEeCCCCCHHHHHHhhc
Confidence 57788999999986 5566666655 444678999999999988764221 11111111110 0
Q ss_pred CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
....+|+|+..-. ....++.+.++|++||.+++...
T Consensus 226 ~~~g~d~v~d~~G--------~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 226 ELRFNQLILETAG--------VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp GGCSSEEEEECSC--------SHHHHHHHHHHCCTTCEEEECCC
T ss_pred ccCCccccccccc--------ccchhhhhhheecCCeEEEEEec
Confidence 1245788775322 12467788899999999988653
No 376
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=87.65 E-value=0.42 Score=44.39 Aligned_cols=96 Identities=18% Similarity=0.036 Sum_probs=60.5
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCC-CCC--CCCCc
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ-DFT--PETGR 230 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~-~~~--~~~~~ 230 (348)
+.++.+||-+|+|. |.++..+++....+|++++.|+..++.+++.-.. .+....-. ++. .. +.
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD------------HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS------------EEEEGGGTSCHHHHSC-SC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCC------------EEEcCcCchHHHHHhh-cC
Confidence 67788999999864 7777777765333699999999999988764211 11111101 110 11 47
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|+|+..-.-. . ...++.+.++|++||.+++..
T Consensus 244 ~D~vid~~g~~--~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 244 FDLIVVCASSL--T----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEEECCSCS--T----TCCTTTGGGGEEEEEEEEECC
T ss_pred CCEEEECCCCC--c----HHHHHHHHHHhcCCCEEEEec
Confidence 99998654320 0 013445778899999998754
No 377
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=87.54 E-value=1.6 Score=39.87 Aligned_cols=92 Identities=14% Similarity=0.066 Sum_probs=61.1
Q ss_pred CCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-------
Q 018970 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (348)
Q Consensus 155 ~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------- 225 (348)
+.++.+||-.|+ |.|..+..++......|++++.+++.++.+++. .. . .. .|..+..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g~--------~---~~--~d~~~~~~~~~i~~ 208 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL-GC--------H---HT--INYSTQDFAEVVRE 208 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TC--------S---EE--EETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CC--------C---EE--EECCCHHHHHHHHH
Confidence 677889999995 668877777765444799999999888888663 21 0 11 1222111
Q ss_pred -CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+.+-.- ..++.+.++|++||.+++..
T Consensus 209 ~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 209 ITGGKGVDVVYDSIGK---------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp HHTTCCEEEEEECSCT---------TTHHHHHHTEEEEEEEEECC
T ss_pred HhCCCCCeEEEECCcH---------HHHHHHHHhhccCCEEEEEe
Confidence 012369999865431 34677889999999988764
No 378
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=87.37 E-value=1.2 Score=41.60 Aligned_cols=96 Identities=15% Similarity=0.033 Sum_probs=62.3
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcC---CCCC----C
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP---LQDF----T 225 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d---~~~~----~ 225 (348)
+.++.+||-+|+|. |.++..+++... .+|++++.|++.++.+++.-.. .++... -.++ .
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD------------LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc------------EEEeccccCcchHHHHHH
Confidence 56788999999774 777888876654 4799999999999988753111 111111 0010 0
Q ss_pred --CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 226 --PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 226 --~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.....+|+|+-+-.- ...+..+.++|++||.+++...
T Consensus 261 ~~~~g~g~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 261 DITHGRGADFILEATGD--------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHTTTSCEEEEEECSSC--------TTHHHHHHHHEEEEEEEEECCC
T ss_pred HHhCCCCCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEEec
Confidence 011369999864321 1356778889999999987643
No 379
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.28 E-value=8.3 Score=29.43 Aligned_cols=90 Identities=9% Similarity=0.010 Sum_probs=50.2
Q ss_pred CcEEEEeccc-cHH-HHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCCcee
Q 018970 159 LVALDCGSGI-GRI-TKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYD 232 (348)
Q Consensus 159 ~~VLDvGcG~-G~~-~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD 232 (348)
.+|+=+|+|. |.. +..|.+.+. .|+++|.++..++..++.. .+.+...|..+.. .....+|
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~------------~~~~~~~d~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI------------DALVINGDCTKIKTLEDAGIEDAD 71 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC------------SSEEEESCTTSHHHHHHTTTTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc------------CcEEEEcCCCCHHHHHHcCcccCC
Confidence 5799999865 322 333333444 6999999998877665432 1334455543311 1124689
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
+|+..-. ++.....+..+.+.+.++ .+++
T Consensus 72 ~vi~~~~-----~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 72 MYIAVTG-----KEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp EEEECCS-----CHHHHHHHHHHHHHTTCC-CEEE
T ss_pred EEEEeeC-----CchHHHHHHHHHHHcCCC-EEEE
Confidence 8887532 112334455556667775 4444
No 380
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=86.77 E-value=2.3 Score=40.70 Aligned_cols=95 Identities=12% Similarity=0.056 Sum_probs=62.9
Q ss_pred cCCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 154 ~~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
.+.++.+||-+|+ |.|.++..++.....+|++++.++.-++.+++.-.. .++...-.++.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~d~~~~~~~~ 292 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE------------AIIDRNAEGYRFWKDEN 292 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC------------EEEETTTTTCCSEEETT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc------------EEEecCcCccccccccc
Confidence 3678889999997 458888888876555789999999999988764221 11111111110
Q ss_pred -----------------CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 -----------------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 -----------------~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+-+-. . ..+..+.++|++||.+++..
T Consensus 293 ~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 293 TQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-------R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp EECHHHHHHHHHHHHHHHTSCCEEEEEECSC-------H--HHHHHHHHHEEEEEEEEESC
T ss_pred ccchHHHHHHHHHHHHHhCCCCCcEEEEcCC-------c--hhHHHHHHHhhCCcEEEEEe
Confidence 01147999985322 1 46777888999999998854
No 381
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=86.60 E-value=0.75 Score=41.92 Aligned_cols=97 Identities=12% Similarity=0.044 Sum_probs=59.1
Q ss_pred CCCCC-cEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-CCCCCc
Q 018970 155 NNQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGR 230 (348)
Q Consensus 155 ~~~~~-~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~ 230 (348)
+.++. +||-+|+ |.|..+..++.....+|++++.+++-++.+++. .. ..-++....+.... ....+.
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l-Ga--------~~~i~~~~~~~~~~~~~~~~~ 216 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL-GA--------KEVLAREDVMAERIRPLDKQR 216 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT-TC--------SEEEECC---------CCSCC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-CC--------cEEEecCCcHHHHHHHhcCCc
Confidence 45554 8999997 568888888765444699999998888888653 21 00111111110000 111246
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|+|+-+-.- ..+..+.++|++||.+++..
T Consensus 217 ~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 217 WAAAVDPVGG---------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEEEEECSTT---------TTHHHHHHTEEEEEEEEECS
T ss_pred ccEEEECCcH---------HHHHHHHHhhccCCEEEEEe
Confidence 9998864321 13567788999999998754
No 382
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=86.30 E-value=3.5 Score=37.61 Aligned_cols=98 Identities=17% Similarity=-0.011 Sum_probs=60.5
Q ss_pred CCCCCcEEEEecccc-HHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CC--CCCC
Q 018970 155 NNQHLVALDCGSGIG-RITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT--PETG 229 (348)
Q Consensus 155 ~~~~~~VLDvGcG~G-~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~--~~~~ 229 (348)
..++.+||-+|+|.+ .++..++.. +..+|+++|.+++-++.+++.-.. .-+++...|..+ +. ....
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~---------~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD---------VTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS---------EEEEC-CCCHHHHHHHHTTSS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe---------EEEeCCCCCHHHHhhhhcCCC
Confidence 577889999999874 455555543 455899999999988888765432 112222112111 00 1113
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+|+++.... -...+..+.++|+++|.+++..
T Consensus 232 g~d~~~~~~~--------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 232 GVQSAIVCAV--------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp CEEEEEECCS--------CHHHHHHHHHTEEEEEEEEECC
T ss_pred CceEEEEecc--------CcchhheeheeecCCceEEEEe
Confidence 4666664322 1256778889999999988754
No 383
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=86.30 E-value=0.71 Score=42.95 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=59.0
Q ss_pred CC-CCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC---CCCCCC
Q 018970 155 NN-QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD---FTPETG 229 (348)
Q Consensus 155 ~~-~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~---~~~~~~ 229 (348)
+. ++.+||-+|+|. |..+..++......|++++.++..++.+.+.+... .+. |..+ +....+
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~-----------~v~--~~~~~~~~~~~~~ 250 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD-----------SFL--VSRDQEQMQAAAG 250 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS-----------EEE--ETTCHHHHHHTTT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc-----------eEE--eccCHHHHHHhhC
Confidence 45 778999999874 66777777654447999999998888877554321 111 1111 100014
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+|+|+.+-.... .++.+.++|+++|.++...
T Consensus 251 ~~D~vid~~g~~~--------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 251 TLDGIIDTVSAVH--------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp CEEEEEECCSSCC--------CSHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCcHH--------HHHHHHHHHhcCCEEEEEc
Confidence 6999986433211 2345667889999988754
No 384
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=86.21 E-value=1.4 Score=40.71 Aligned_cols=96 Identities=20% Similarity=0.136 Sum_probs=62.6
Q ss_pred cCCCCCcEEEEe--ccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----C
Q 018970 154 RNNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (348)
Q Consensus 154 ~~~~~~~VLDvG--cG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~ 226 (348)
.+.++.+||-+| .|.|..+..++.....+|++++.+++.++.+++.-.. .....+-.++. .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~~~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAK------------RGINYRSEDFAAVIKAE 231 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC------------EEEeCCchHHHHHHHHH
Confidence 367888999995 3468888877766444799999999999988764221 11111111110 0
Q ss_pred CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
..+.+|+|+.+-.- ..+..+.+.|++||.+++...
T Consensus 232 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 232 TGQGVDIILDMIGA---------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HSSCEEEEEESCCG---------GGHHHHHHTEEEEEEEEECCC
T ss_pred hCCCceEEEECCCH---------HHHHHHHHHhccCCEEEEEEe
Confidence 02469999864431 245677889999999988643
No 385
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=85.88 E-value=8 Score=39.12 Aligned_cols=149 Identities=12% Similarity=0.078 Sum_probs=88.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-------CcEEEEcCCHHHHHHHH-HHhCC-------------CCCCC-----cCC
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYF-------NEVDLLEPVSHFLDAAR-ESLAP-------------ENHMA-----PDM 210 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~-------~~v~~vD~S~~~l~~a~-~~~~~-------------~~~~~-----~~~ 210 (348)
+...|+-+|||-=.....|..... ..+..+|++-..+-..+ +.+.. ..... .-.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 456899999998777777764422 24555554433332222 22221 00000 000
Q ss_pred CcceeEEEcCCCCCC----------C-CCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccC----CC
Q 018970 211 HKATNFFCVPLQDFT----------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR----SG 275 (348)
Q Consensus 211 ~~~i~~~~~d~~~~~----------~-~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~----~~ 275 (348)
..+..++.+|+.+.. + ....--++++-.++.+++.++...+|+.+.+. |+|.+++.+.+.. +.
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d~ 264 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKGPFEP 264 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTSH
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCCh
Confidence 135678888987731 1 23445677888999999999999999999864 6888888774432 11
Q ss_pred c------ee---cCCCC--ceecCHHHHHHHHHhcCCeEEEEe
Q 018970 276 F------VL---DKEDR--SITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 276 ~------~~---d~~~~--~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
| .+ ...-. ....+.+...+.|.+.||..+...
T Consensus 265 f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~ 307 (695)
T 2zwa_A 265 FSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVG 307 (695)
T ss_dssp HHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCccee
Confidence 1 00 00011 112478889999999999876644
No 386
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=85.70 E-value=0.47 Score=44.02 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=58.6
Q ss_pred CC-CCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEc-CCCCCCCCCCce
Q 018970 155 NN-QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRY 231 (348)
Q Consensus 155 ~~-~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~f 231 (348)
.. ++.+||-+|+|. |.++..+++....+|++++.+++.++.+++.+... .+... +.+.+....+.+
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~-----------~vi~~~~~~~~~~~~~g~ 245 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGAD-----------DYVIGSDQAKMSELADSL 245 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCS-----------CEEETTCHHHHHHSTTTE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCc-----------eeeccccHHHHHHhcCCC
Confidence 45 788999999874 66777776553336999999988888776444321 11111 100000001369
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|+|+-.-.-. ..++.+.++|+|||.+++..
T Consensus 246 D~vid~~g~~--------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 246 DYVIDTVPVH--------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEEEECCCSC--------CCSHHHHTTEEEEEEEEECS
T ss_pred CEEEECCCCh--------HHHHHHHHHhccCCEEEEeC
Confidence 9998643311 12455678999999998754
No 387
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.63 E-value=4 Score=33.42 Aligned_cols=93 Identities=15% Similarity=-0.016 Sum_probs=54.0
Q ss_pred CCcEEEEeccc-cHH-HHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----C-CCC
Q 018970 158 HLVALDCGSGI-GRI-TKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----P-ETG 229 (348)
Q Consensus 158 ~~~VLDvGcG~-G~~-~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~-~~~ 229 (348)
+.+|+=+|||. |.. +..|... +. .|+++|.+++.++.+++. .+.+..+|..+.. . .-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~-------------g~~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE-------------GRNVISGDATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT-------------TCCEEECCTTCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC-------------CCCEEEcCCCCHHHHHhccCCC
Confidence 45899999875 433 3444445 55 499999999888776542 1334555554311 1 124
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+|+|+.... ++.....+-...+.+.|++.+++..
T Consensus 105 ~ad~vi~~~~-----~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 105 HVKLVLLAMP-----HHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CCCEEEECCS-----SHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCEEEEeCC-----ChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 6898887432 1122223334555667777777653
No 388
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=85.59 E-value=1.3 Score=40.57 Aligned_cols=59 Identities=12% Similarity=0.097 Sum_probs=44.6
Q ss_pred HHHHHHHHhhhcCCccCCCCCcEEEEeccccHHHHHHHHhCCCcEEEEcCCH---HHHHHHHHHhCCC
Q 018970 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPE 203 (348)
Q Consensus 139 ~~~l~~~l~~~l~~~~~~~~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~---~~l~~a~~~~~~~ 203 (348)
..++..++... ..++..|||.=||+|..+......+. ..+++|+++ ..++.+++++...
T Consensus 229 ~~l~~~~i~~~-----~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 229 AAVIERLVRAL-----SHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHHHHH-----SCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHh-----CCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHc
Confidence 45555555432 35778999999999999988776665 599999999 9999999998653
No 389
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=85.39 E-value=1.4 Score=40.60 Aligned_cols=90 Identities=17% Similarity=0.069 Sum_probs=57.1
Q ss_pred CcEEEEeccc-cHHH-HHHH-HhCCC-cEEEEcCCHH---HHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CC
Q 018970 159 LVALDCGSGI-GRIT-KNLL-IRYFN-EVDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PE 227 (348)
Q Consensus 159 ~~VLDvGcG~-G~~~-~~la-~~~~~-~v~~vD~S~~---~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~ 227 (348)
.+||-+|+|. |.++ ..++ +.... .|++++.+++ -++.+++. .. +.....-.++. .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l-Ga------------~~v~~~~~~~~~i~~~- 239 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL-DA------------TYVDSRQTPVEDVPDV- 239 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT-TC------------EEEETTTSCGGGHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc-CC------------cccCCCccCHHHHHHh-
Confidence 8999999864 7777 7777 54333 4999999888 78888653 21 11111101110 1
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.+.+|+|+-.-.- ...++.+.++|++||.+++...
T Consensus 240 ~gg~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 240 YEQMDFIYEATGF--------PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp SCCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCCC--------hHHHHHHHHHHhcCCEEEEEeC
Confidence 1369999854321 1357788899999999988643
No 390
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=85.19 E-value=0.22 Score=45.04 Aligned_cols=93 Identities=11% Similarity=-0.051 Sum_probs=59.5
Q ss_pred CCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCC-CCCCCCCCce
Q 018970 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFTPETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~f 231 (348)
+.++.+||-+|+ |.|..+..++.....+|++++.++..++.+++. .. . ......- .++...-+.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga--------~---~~~~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL-GA--------E---EAATYAEVPERAKAWGGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT-TC--------S---EEEEGGGHHHHHHHTTSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CC--------C---EEEECCcchhHHHHhcCc
Confidence 467889999998 468888888765444799999999988888653 21 0 1111110 0110000469
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|+|+. -. . ..++.+.++|+++|.+++..
T Consensus 191 d~vid-~g-------~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 191 DLVLE-VR-------G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEEEE-CS-------C--TTHHHHHTTEEEEEEEEEC-
T ss_pred eEEEE-CC-------H--HHHHHHHHhhccCCEEEEEe
Confidence 99986 32 1 24677889999999988753
No 391
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=84.92 E-value=4 Score=37.34 Aligned_cols=91 Identities=12% Similarity=0.112 Sum_probs=59.6
Q ss_pred CCCcEEEEe-cc-ccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----CCCC
Q 018970 157 QHLVALDCG-SG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PETG 229 (348)
Q Consensus 157 ~~~~VLDvG-cG-~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~ 229 (348)
++.+||-+| +| .|..+..++.....+|++++.+++-++.+++.-.. .+...+ +++. ...+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~-~~~~~~~~~~~~~ 216 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGAD------------IVLNHK-ESLLNQFKTQGIE 216 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCS------------EEECTT-SCHHHHHHHHTCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc------------EEEECC-ccHHHHHHHhCCC
Confidence 678999994 54 47778877765444799999999999998874221 011110 1110 1124
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
.+|+|+-+-. -...++.+.++|+++|.++..
T Consensus 217 g~Dvv~d~~g--------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 217 LVDYVFCTFN--------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp CEEEEEESSC--------HHHHHHHHHHHEEEEEEEEES
T ss_pred CccEEEECCC--------chHHHHHHHHHhccCCEEEEE
Confidence 6999986322 134677888999999999764
No 392
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=84.80 E-value=3.9 Score=35.67 Aligned_cols=106 Identities=13% Similarity=0.078 Sum_probs=66.1
Q ss_pred CCcEEEEecc----ccH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC------
Q 018970 158 HLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (348)
Q Consensus 158 ~~~VLDvGcG----~G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------ 226 (348)
+.+||-.|++ .|. ++..|++++.. |.+++.+....+.+.+.....+ ..++.++.+|+.+...
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGAR-LIFTYAGERLEKSVHELAGTLD------RNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHTSS------SCCCEEEECCCSSSHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEecCchHHHHHHHHHHHhcC------CCCceEEeCCCCCHHHHHHHHH
Confidence 4578999976 343 56666766764 9999887766665555443321 1257888999887531
Q ss_pred ----CCCceeEEeechhhh----------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEec
Q 018970 227 ----ETGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ----~~~~fD~Ii~~~~l~----------~~~~~d~~-----------~~l~~~~~~LkpgG~lii~~~ 270 (348)
..+..|+++.+-.+. ..+.+++. .+++.+...|+++|.+++...
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 013689888754432 23333333 255677778888898887643
No 393
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=84.76 E-value=2.3 Score=37.11 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=65.0
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (348)
+.++|-.|++.|. ++..|++++. +|.+++.++..++...+.+. .++.+..+|+.+...
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG----------PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG----------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC----------CcceEEEccCCCHHHHHHHHHHH
Confidence 4578888876552 4555666666 59999999888877766552 357888889877431
Q ss_pred --CCCceeEEeechhhh------cCChhhHHH-----------HHHHHHHcCCCCcEEEEEe
Q 018970 227 --ETGRYDVIWVQWCIG------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 --~~~~fD~Ii~~~~l~------~~~~~d~~~-----------~l~~~~~~LkpgG~lii~~ 269 (348)
..+..|+++.+-.+. ..+.+++.. +++.+...++.+|.++...
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 014789998754332 223333332 3456666677788877754
No 394
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=84.14 E-value=1.1 Score=40.86 Aligned_cols=98 Identities=12% Similarity=-0.008 Sum_probs=60.4
Q ss_pred CCCCC-cEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-CCCCc
Q 018970 155 NNQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGR 230 (348)
Q Consensus 155 ~~~~~-~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~ 230 (348)
+.++. +||-+|| |.|..+..++.....+|++++.+++-++.+++.-.. .-++....+..... ...+.
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS---------EVISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCS---------EEEEHHHHCSSCCCSSCCCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---------EEEECCCchHHHHHHhhcCC
Confidence 45554 8999997 457777777765333599999998888888763211 11111111111111 12246
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+|+|+-+-. . ..+..+.++|++||.+++...
T Consensus 218 ~d~vid~~g-------~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 218 WQGAVDPVG-------G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EEEEEESCC-------T--HHHHHHHTTEEEEEEEEECCC
T ss_pred ccEEEECCc-------H--HHHHHHHHhhcCCCEEEEEec
Confidence 999885432 1 257788899999999987643
No 395
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.35 E-value=3.3 Score=36.47 Aligned_cols=104 Identities=20% Similarity=0.160 Sum_probs=64.0
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCC------------HHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCC
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S------------~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~ 222 (348)
+.+||-.|++.|. ++..|++++.. |.++|.+ ...++.+...+... ..++.++.+|+.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~ 81 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGAD-IILFDICHDIETNEYPLATSRDLEEAGLEVEKT-------GRKAYTAEVDVR 81 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-------TSCEEEEECCTT
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcccccccccccchhhhHHHHHHHHHHHhc-------CCceEEEEccCC
Confidence 4578888876552 45556666664 9999876 55665555444322 346788888987
Q ss_pred CCCC----------CCCceeEEeechhhhc----CChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 018970 223 DFTP----------ETGRYDVIWVQWCIGH----LTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 223 ~~~~----------~~~~fD~Ii~~~~l~~----~~~~d~~-----------~~l~~~~~~LkpgG~lii~~ 269 (348)
+... ..+..|+++.+-.+.. .+.+++. .+++.+...|+.+|.++...
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 7431 0136899987654432 2333333 34566777777888877754
No 396
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.03 E-value=5.8 Score=34.68 Aligned_cols=131 Identities=9% Similarity=0.015 Sum_probs=72.0
Q ss_pred CcEEEEeccccHHHHHHHHh----CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 159 LVALDCGSGIGRITKNLLIR----YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~la~~----~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.+||=.|| |.++..++.. +. +|++++-++.-.+.... .++++..+|+.++. ...+|+|
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-------------~~~~~~~~D~~d~~--~~~~d~v 67 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA-------------SGAEPLLWPGEEPS--LDGVTHL 67 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH-------------TTEEEEESSSSCCC--CTTCCEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh-------------CCCeEEEecccccc--cCCCCEE
Confidence 57999995 7777666544 44 69999988765544332 24788889998866 3578999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEE-Eeccc--C-CCceecCCC-----CceecCHHHHHHHHHhc-CCeEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL-KENIA--R-SGFVLDKED-----RSITRSDFYFKELFSRC-GLHIY 304 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii-~~~~~--~-~~~~~d~~~-----~~~~~s~~~l~~l~~~a-Gf~~v 304 (348)
+.........+.....+++.+.+.-..-+.|++ +.... . .+..++... ..+..+.-..++++... |+..+
T Consensus 68 i~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ 147 (286)
T 3ius_A 68 LISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLH 147 (286)
T ss_dssp EECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEE
T ss_pred EECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEE
Confidence 876554433222234455555443112245554 33211 0 111112111 11223444557777776 77766
Q ss_pred EEe
Q 018970 305 KSK 307 (348)
Q Consensus 305 ~~~ 307 (348)
-..
T Consensus 148 ilR 150 (286)
T 3ius_A 148 VFR 150 (286)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 397
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=82.97 E-value=2.2 Score=39.45 Aligned_cols=88 Identities=19% Similarity=0.098 Sum_probs=56.6
Q ss_pred CCcEEEEeccc-cHHHHHHHHh-CCCcEEEEcCCH---HHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CCC----C
Q 018970 158 HLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTP----E 227 (348)
Q Consensus 158 ~~~VLDvGcG~-G~~~~~la~~-~~~~v~~vD~S~---~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~----~ 227 (348)
+.+||-+|+|. |..+..++.. +. .|++++.++ +-++.+++.- .+.. | .+ +.. .
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~g-------------a~~v--~-~~~~~~~~~~~ 243 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETK-------------TNYY--N-SSNGYDKLKDS 243 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHT-------------CEEE--E-CTTCSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhC-------------Ccee--c-hHHHHHHHHHh
Confidence 78999999853 5666666654 45 799999987 7777776531 1111 2 21 110 0
Q ss_pred CCceeEEeechhhhcCChhhHHHHH-HHHHHcCCCCcEEEEEec
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFF-KRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l-~~~~~~LkpgG~lii~~~ 270 (348)
.+.+|+|+.+-... ..+ +.+.++|+++|.+++...
T Consensus 244 ~~~~d~vid~~g~~--------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 244 VGKFDVIIDATGAD--------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp HCCEEEEEECCCCC--------THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCCCEEEECCCCh--------HHHHHHHHHHHhcCCEEEEEec
Confidence 14699998654311 245 788899999999887643
No 398
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=82.29 E-value=7.5 Score=30.11 Aligned_cols=67 Identities=9% Similarity=0.041 Sum_probs=42.6
Q ss_pred CcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCCcee
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYD 232 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD 232 (348)
.+|+-+|||. |. ++..|.+.+. .|+++|.+++.++.+++. ...+..+|..+.. .....+|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-------------~~~~~~gd~~~~~~l~~~~~~~~d 72 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-------------GFDAVIADPTDESFYRSLDLEGVS 72 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------------TCEEEECCTTCHHHHHHSCCTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-------------CCcEEECCCCCHHHHHhCCcccCC
Confidence 4799999975 33 3334444455 599999999988877642 1456667766522 1124689
Q ss_pred EEeechh
Q 018970 233 VIWVQWC 239 (348)
Q Consensus 233 ~Ii~~~~ 239 (348)
+|+....
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 8886433
No 399
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=82.19 E-value=0.41 Score=45.00 Aligned_cols=101 Identities=12% Similarity=0.033 Sum_probs=55.2
Q ss_pred CCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 157 ~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
++.+|+=+|+|. |.....++......|+++|.++.-++.+++.+... +.....+..++...-...|+|+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~----------~~~~~~~~~~l~~~l~~aDvVi 236 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR----------IHTRYSSAYELEGAVKRADLVI 236 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS----------SEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCe----------eEeccCCHHHHHHHHcCCCEEE
Confidence 467999999974 44444444433337999999999888887654321 1111101011110012579998
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+-...... ...-+.+.+.+.|||||.++...
T Consensus 237 ~~~~~p~~~--t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 237 GAVLVPGAK--APKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp ECCCCTTSC--CCCCBCHHHHTTSCTTCEEEEGG
T ss_pred ECCCcCCCC--CcceecHHHHhcCCCCcEEEEEe
Confidence 733211101 00112356677899999887653
No 400
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=82.16 E-value=0.43 Score=44.54 Aligned_cols=98 Identities=8% Similarity=0.047 Sum_probs=54.8
Q ss_pred CCcEEEEeccc-cHHHHHHHHh-CCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 158 HLVALDCGSGI-GRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 158 ~~~VLDvGcG~-G~~~~~la~~-~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
+.+||=+|+|. |..+..++.. +. +|+++|.++.-++.+++.... .+.....+..++...-..+|+|+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS----------RVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG----------GSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc----------eeEeeeCCHHHHHHHHcCCCEEE
Confidence 47999999964 4444444444 45 799999999988888766432 11111111111110012589998
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
..-...... .+.-+.+.+.+.|+|||.++..
T Consensus 236 ~~~~~~~~~--~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 236 GAVLVPGRR--APILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp ECCCCTTSS--CCCCBCHHHHTTSCTTCEEEET
T ss_pred ECCCcCCCC--CCeecCHHHHhhCCCCCEEEEE
Confidence 644332211 0001134566788999988764
No 401
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=82.16 E-value=0.53 Score=44.08 Aligned_cols=100 Identities=10% Similarity=0.029 Sum_probs=53.3
Q ss_pred CCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 157 ~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
++.+|+-+|+|. |..+..++.....+|+++|.++..++.+.+.... .+.....+..++...-..+|+|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~----------~~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG----------RVITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----------SEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc----------eEEEecCCHHHHHHHHhCCCEEE
Confidence 347899999963 4444444433333699999999888877664432 11111111111110013579998
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
.+-...... ...-+.+.+.+.|+|||.++..
T Consensus 235 ~~~g~~~~~--~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 235 GAVLVPGAK--APKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ECCC---------CCSCHHHHTTSCTTCEEEEC
T ss_pred ECCCCCccc--cchhHHHHHHHhhcCCCEEEEE
Confidence 654432100 1111245677888999988764
No 402
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=82.03 E-value=2.9 Score=39.84 Aligned_cols=98 Identities=14% Similarity=0.040 Sum_probs=62.9
Q ss_pred cCCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCC-------
Q 018970 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF------- 224 (348)
Q Consensus 154 ~~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~------- 224 (348)
.+.++.+||-.|+ |.|..+..++.....+|++++.++.-++.+++.-.. ..++....++.+.
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCD---------LVINRAELGITDDIADDPRR 287 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC---------CEEEHHHHTCCTTGGGCHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC---------EEEecccccccccccccccc
Confidence 4678899999997 457888888776555789999999999888653211 1111111122111
Q ss_pred --------C-----CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 225 --------T-----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 225 --------~-----~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
. .....+|+|+-+-. . ..++.+.++|++||.+++..
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~G-------~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHTG-------R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECSC-------H--HHHHHHHHHSCTTCEEEESC
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECCC-------c--hHHHHHHHHHhcCCEEEEEe
Confidence 0 00246899886433 1 35677888999999998864
No 403
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=81.89 E-value=3.4 Score=37.79 Aligned_cols=92 Identities=13% Similarity=0.080 Sum_probs=61.2
Q ss_pred cCCCCCcEEEEec--cccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------
Q 018970 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (348)
Q Consensus 154 ~~~~~~~VLDvGc--G~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------ 225 (348)
.+.++.+||-+|+ |.|..+..++.....+|+++ .++..++.+++.-. +... +-.++.
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa-------------~~i~-~~~~~~~~~~~~ 211 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGA-------------TPID-ASREPEDYAAEH 211 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTS-------------EEEE-TTSCHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCC-------------CEec-cCCCHHHHHHHH
Confidence 3678899999994 45888888876644479999 88888888876421 1111 111111
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.....+|+|+-+-. . ..+..+.++|+++|.+++..
T Consensus 212 ~~~~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 212 TAGQGFDLVYDTLG-------G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HTTSCEEEEEESSC-------T--HHHHHHHHHEEEEEEEEESC
T ss_pred hcCCCceEEEECCC-------c--HHHHHHHHHHhcCCeEEEEc
Confidence 01246999986432 1 35777888999999998754
No 404
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=81.82 E-value=4.6 Score=36.04 Aligned_cols=104 Identities=13% Similarity=0.045 Sum_probs=64.2
Q ss_pred CCcEEEEecc----ccH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC------
Q 018970 158 HLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (348)
Q Consensus 158 ~~~VLDvGcG----~G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------ 226 (348)
+.+||-.|++ .|. ++..|++.+.. |.+++.++...+.+++.... ...+.+..+|+.+...
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAE-LAFTYQGDALKKRVEPLAEE--------LGAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCE-EEEEECSHHHHHHHHHHHHH--------HTCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHh--------cCCceEEECCCCCHHHHHHHHH
Confidence 4678999976 333 55666666765 99999887655554443322 1246788889877431
Q ss_pred ----CCCceeEEeechhhh----------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEec
Q 018970 227 ----ETGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ----~~~~fD~Ii~~~~l~----------~~~~~d~~-----------~~l~~~~~~LkpgG~lii~~~ 270 (348)
..+..|++|.+-.+. ..+.+++. .+++.+...|+.+|.|+....
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 114789998754432 23333332 345667777888888887643
No 405
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.24 E-value=5.7 Score=37.64 Aligned_cols=92 Identities=14% Similarity=0.122 Sum_probs=58.9
Q ss_pred CCcEEEEeccc-cHHHHH-HHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCCce
Q 018970 158 HLVALDCGSGI-GRITKN-LLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (348)
Q Consensus 158 ~~~VLDvGcG~-G~~~~~-la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~f 231 (348)
..+|+-||+|. |..... |...+. .|+++|.++..++.+++. .+.++.+|..+.. ..-...
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~-------------g~~vi~GDat~~~~L~~agi~~A 69 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF-------------GMKVFYGDATRMDLLESAGAAKA 69 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT-------------TCCCEESCTTCHHHHHHTTTTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC-------------CCeEEEcCCCCHHHHHhcCCCcc
Confidence 35799999975 443333 333455 599999999999988742 1445667776632 122468
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
|+|++... ++.....+-...+.+.|...+++.
T Consensus 70 ~~viv~~~-----~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 70 EVLINAID-----DPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp SEEEECCS-----SHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CEEEECCC-----ChHHHHHHHHHHHHhCCCCeEEEE
Confidence 88876432 223344556667777888887774
No 406
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=81.00 E-value=9.4 Score=33.21 Aligned_cols=88 Identities=13% Similarity=0.158 Sum_probs=55.1
Q ss_pred CcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|.=||||. |. ++..++..+...|.++|.+++.++.+.+... +.+ ..+..+.. ...|+|+.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g------------~~~-~~~~~~~~---~~~Dvvi~ 74 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE------------AEY-TTDLAEVN---PYAKLYIV 74 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT------------CEE-ESCGGGSC---SCCSEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC------------Cce-eCCHHHHh---cCCCEEEE
Confidence 5799999985 33 4455555555448999999988877765532 111 22333322 35799887
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
.-.-. ....+++.+...+++|..++-
T Consensus 75 av~~~-----~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 75 SLKDS-----AFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp CCCHH-----HHHHHHHHHHTTCCTTCEEEE
T ss_pred ecCHH-----HHHHHHHHHHhhcCCCcEEEE
Confidence 54322 345677888888888766554
No 407
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=80.56 E-value=0.8 Score=42.69 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=57.3
Q ss_pred CCCCCcEEEEe-cc-ccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---CCCC
Q 018970 155 NNQHLVALDCG-SG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (348)
Q Consensus 155 ~~~~~~VLDvG-cG-~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~ 229 (348)
+.++.+||-+| +| .|..+..++......|++++ ++.-++.+++. .. -.+...+-.++. ....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~l-Ga-----------~~v~~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKL-GA-----------DDVIDYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT-TC-----------SEEEETTSSCHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHc-CC-----------CEEEECCchHHHHHHhhcC
Confidence 56788999999 34 58888888766444688888 67777777543 21 011111111110 0114
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+|+|+-+-.-. ...+..+.++|++||.+++..
T Consensus 248 g~D~vid~~g~~-------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 248 PFDFILDNVGGS-------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp CBSEEEESSCTT-------HHHHGGGGBCSSSCCEEEESC
T ss_pred CCCEEEECCCCh-------hhhhHHHHHhhcCCcEEEEeC
Confidence 689998543211 134566778999999998754
No 408
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=79.37 E-value=5.3 Score=36.02 Aligned_cols=93 Identities=15% Similarity=-0.016 Sum_probs=58.0
Q ss_pred CCCCCcEEEEe-cc-ccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCC-CCCCCCce
Q 018970 155 NNQHLVALDCG-SG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRY 231 (348)
Q Consensus 155 ~~~~~~VLDvG-cG-~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~f 231 (348)
+.++.+||-+| +| .|.++..+++....+|++++ ++.-++.+++.-.. .++...-.+ +...-..+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~------------~~i~~~~~~~~~~~~~g~ 216 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAE------------QCINYHEEDFLLAISTPV 216 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCS------------EEEETTTSCHHHHCCSCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCC------------EEEeCCCcchhhhhccCC
Confidence 67888999997 55 58888888876544788887 55557777664211 111111111 11111469
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|+|+-+-. . ..+..+.++|++||.++...
T Consensus 217 D~v~d~~g-------~--~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 217 DAVIDLVG-------G--DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEEEESSC-------H--HHHHHHGGGEEEEEEEEECC
T ss_pred CEEEECCC-------c--HHHHHHHHhccCCCEEEEeC
Confidence 99985332 1 22377889999999998763
No 409
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=78.81 E-value=3.9 Score=35.96 Aligned_cols=65 Identities=5% Similarity=-0.056 Sum_probs=42.5
Q ss_pred CCceeEEeechhhhcC--------Ch----hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHH
Q 018970 228 TGRYDVIWVQWCIGHL--------TD----DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKEL 295 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~--------~~----~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l 295 (348)
+++||+|++......- .. +.+...++.+.++|+|||.+++.... .....+..+
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d---------------~~~~~~~~~ 85 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP---------------FNCAFICQY 85 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH---------------HHHHHHHHH
T ss_pred ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc---------------HHHHHHHHH
Confidence 4678888876554322 11 13567788899999999999886310 112345667
Q ss_pred HHhcCCeEEEEe
Q 018970 296 FSRCGLHIYKSK 307 (348)
Q Consensus 296 ~~~aGf~~v~~~ 307 (348)
+.+.||......
T Consensus 86 ~~~~gf~~~~~i 97 (260)
T 1g60_A 86 LVSKGMIFQNWI 97 (260)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHhhccceeEEE
Confidence 888999876633
No 410
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=78.46 E-value=7.1 Score=34.68 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=62.4
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHH-HHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSH-FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~-~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------- 226 (348)
+.+||-.|++.|. ++..|++++. .|.+++.+.. ..+...+..... ..++.++.+|+.+...
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKE-------GVKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTT-------TCCEEEEESCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHHH
Confidence 4578888876552 4555565666 4888887654 344444433322 3467888889877431
Q ss_pred ---CCCceeEEeechhh-------hcCChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 018970 227 ---ETGRYDVIWVQWCI-------GHLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ---~~~~fD~Ii~~~~l-------~~~~~~d~~-----------~~l~~~~~~LkpgG~lii~~ 269 (348)
..+..|+++.+-.. ..++.+++. .+++.+...|+.+|.+++..
T Consensus 119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 01468999865332 222333333 35567777888888877754
No 411
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=77.79 E-value=13 Score=29.30 Aligned_cols=93 Identities=14% Similarity=0.071 Sum_probs=54.3
Q ss_pred CcEEEEeccccHHHHHH----HHhCCCcEEEEcCC-HHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCC
Q 018970 159 LVALDCGSGIGRITKNL----LIRYFNEVDLLEPV-SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (348)
Q Consensus 159 ~~VLDvGcG~G~~~~~l----a~~~~~~v~~vD~S-~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~ 229 (348)
.+|+=+|+| .++..+ ...+. .|+++|.+ ++.++...+... ..+.+..+|..+.. ..-.
T Consensus 4 ~~vlI~G~G--~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~----------~~~~~i~gd~~~~~~l~~a~i~ 70 (153)
T 1id1_A 4 DHFIVCGHS--ILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG----------DNADVIPGDSNDSSVLKKAGID 70 (153)
T ss_dssp SCEEEECCS--HHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC----------TTCEEEESCTTSHHHHHHHTTT
T ss_pred CcEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc----------CCCeEEEcCCCCHHHHHHcChh
Confidence 578888875 444433 33354 59999997 455555544432 13667778876532 1124
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
..|+|++... ++.....+....+.+.|...++..-
T Consensus 71 ~ad~vi~~~~-----~d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 71 RCRAILALSD-----NDADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp TCSEEEECSS-----CHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred hCCEEEEecC-----ChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 6788886432 1233445556666677777776644
No 412
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=77.68 E-value=6.3 Score=35.31 Aligned_cols=89 Identities=11% Similarity=0.051 Sum_probs=54.2
Q ss_pred CCcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 158 ~~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
..+|.=||+|. |. ++..|+..+. .|++.|.+++.++.+.+. | ......+..+.. ...|+|+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~----g---------~~~~~~~~~e~~---~~aDvvi 69 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAE----G---------ACGAAASAREFA---GVVDALV 69 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----T---------CSEEESSSTTTT---TTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc----C---------CccccCCHHHHH---hcCCEEE
Confidence 35799999986 33 4555565566 599999999888776653 1 111234444432 3469888
Q ss_pred echhhhcCChhhHHHHH---HHHHHcCCCCcEEEE
Q 018970 236 VQWCIGHLTDDDFVSFF---KRAKVGLKPGGFFVL 267 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l---~~~~~~LkpgG~lii 267 (348)
.+-.-. .....++ +.+...|+||..++-
T Consensus 70 ~~vp~~----~~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 70 ILVVNA----AQVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp ECCSSH----HHHHHHHC--CCCGGGSCTTCEEEE
T ss_pred EECCCH----HHHHHHHhChhhHHhhCCCCCEEEe
Confidence 753311 1344555 566677888776654
No 413
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=76.95 E-value=4.5 Score=35.14 Aligned_cols=105 Identities=18% Similarity=0.034 Sum_probs=62.6
Q ss_pred CCCCcEEEEecc----ccH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC----
Q 018970 156 NQHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---- 226 (348)
Q Consensus 156 ~~~~~VLDvGcG----~G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---- 226 (348)
.++.+||-.|++ .|. ++..|++++. .|.+++.+....+.+++.... ...+.++.+|+.+...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~ 82 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAE--------FGSELVFPCDVADDAQIDAL 82 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHH--------TTCCCEEECCTTCHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHH--------cCCcEEEECCCCCHHHHHHH
Confidence 456789999964 332 4455555666 599998776555544443322 1236788889877431
Q ss_pred ------CCCceeEEeechhhhc-----------CChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 018970 227 ------ETGRYDVIWVQWCIGH-----------LTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ------~~~~fD~Ii~~~~l~~-----------~~~~d~~-----------~~l~~~~~~LkpgG~lii~~ 269 (348)
..+..|++|.+-.+.. .+.+++. .+++.+...|+++|.+++..
T Consensus 83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 83 FASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 1147899997654432 3333333 24455666677788777654
No 414
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=76.48 E-value=13 Score=32.58 Aligned_cols=88 Identities=14% Similarity=0.073 Sum_probs=53.3
Q ss_pred cEEEEeccc-cH-HHHHHHHhCCC-cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCC-ceeEEe
Q 018970 160 VALDCGSGI-GR-ITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-RYDVIW 235 (348)
Q Consensus 160 ~VLDvGcG~-G~-~~~~la~~~~~-~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~fD~Ii 235 (348)
+|.=||+|. |. ++..+...+.. +|+++|.++..++.+++. |. ......+..+.. . ..|+|+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~--------~~~~~~~~~~~~---~~~aDvVi 67 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI--------IDEGTTSIAKVE---DFSPDFVM 67 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS--------CSEEESCGGGGG---GTCCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CC--------cccccCCHHHHh---cCCCCEEE
Confidence 688899886 33 34445544542 699999999888776532 11 101112322211 3 579888
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
..-... ....+++.+...++++..++.
T Consensus 68 lavp~~-----~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 68 LSSPVR-----TFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp ECSCHH-----HHHHHHHHHHHHSCTTCEEEE
T ss_pred EcCCHH-----HHHHHHHHHHhhCCCCcEEEE
Confidence 754332 455777888888998886664
No 415
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=76.42 E-value=11 Score=34.78 Aligned_cols=93 Identities=14% Similarity=0.043 Sum_probs=58.6
Q ss_pred CCCCcEEEEec-c-ccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----CCC
Q 018970 156 NQHLVALDCGS-G-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PET 228 (348)
Q Consensus 156 ~~~~~VLDvGc-G-~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~ 228 (348)
.++.+||-+|+ | .|.++..+++....+|+++. |+.-++.+++.-.. .++...-.++. ...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~t~ 229 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAE------------EVFDYRAPNLAQTIRTYTK 229 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS------------EEEETTSTTHHHHHHHHTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCc------------EEEECCCchHHHHHHHHcc
Confidence 67789999998 3 68888888876544688774 88888888654211 11211111111 112
Q ss_pred CceeEEeechhhhcCChhhHHHHHHHHHHcC-CCCcEEEEEe
Q 018970 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGL-KPGGFFVLKE 269 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~L-kpgG~lii~~ 269 (348)
+.+|+|+-+-.- ...+..+.+.| ++||.+++..
T Consensus 230 g~~d~v~d~~g~--------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 230 NNLRYALDCITN--------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp TCCCEEEESSCS--------HHHHHHHHHHSCTTCEEEEESS
T ss_pred CCccEEEECCCc--------hHHHHHHHHHhhcCCCEEEEEe
Confidence 459998853321 24567778888 6999998754
No 416
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=76.28 E-value=12 Score=32.71 Aligned_cols=86 Identities=14% Similarity=0.038 Sum_probs=53.5
Q ss_pred cEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeec
Q 018970 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (348)
Q Consensus 160 ~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~ 237 (348)
+|.=||||. |. ++..+...+. +|+++|.+++.++.+.+. +. . .. ...+..+. ...|+|+..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~----g~-----~--~~-~~~~~~~~----~~~D~vi~a 64 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVER----QL-----V--DE-AGQDLSLL----QTAKIIFLC 64 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TS-----C--SE-EESCGGGG----TTCSEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhC----CC-----C--cc-ccCCHHHh----CCCCEEEEE
Confidence 578899886 33 4455555555 599999999888776532 11 0 01 12233332 357998875
Q ss_pred hhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
-.-. ....+++.+...++||..++-
T Consensus 65 v~~~-----~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 65 TPIQ-----LILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp SCHH-----HHHHHHHHHGGGSCTTCEEEE
T ss_pred CCHH-----HHHHHHHHHHhhCCCCCEEEE
Confidence 4422 456788888888888776543
No 417
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=76.06 E-value=9.6 Score=33.17 Aligned_cols=107 Identities=14% Similarity=0.121 Sum_probs=66.6
Q ss_pred CCCcEEEEec----cccH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-----
Q 018970 157 QHLVALDCGS----GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----- 226 (348)
Q Consensus 157 ~~~~VLDvGc----G~G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----- 226 (348)
.++++|--|+ |.|. ++..|++.+.. |..++.++..++.+.+.+.+.+ ..++.++.+|+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~-Vvi~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~ 77 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAK-LVFTYRKERSRKELEKLLEQLN------QPEAHLYQIDVQSDEEVINGF 77 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHGGGT------CSSCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcC------CCcEEEEEccCCCHHHHHHHH
Confidence 3567888885 4554 56667777775 9999999888888777665421 2357788889876420
Q ss_pred -----CCCceeEEeechhhh----------cCChhhHHH-----------HHHHHHHcCCCCcEEEEEec
Q 018970 227 -----ETGRYDVIWVQWCIG----------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 -----~~~~fD~Ii~~~~l~----------~~~~~d~~~-----------~l~~~~~~LkpgG~lii~~~ 270 (348)
.-+..|+++.+-.+. ....+++.. ..+.+...++.+|.|+....
T Consensus 78 ~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS 147 (256)
T 4fs3_A 78 EQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTY 147 (256)
T ss_dssp HHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEEC
T ss_pred HHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEec
Confidence 125789888653321 122222221 22344566788898887643
No 418
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=76.05 E-value=5.4 Score=34.76 Aligned_cols=104 Identities=13% Similarity=-0.020 Sum_probs=61.9
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEE-cCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~v-D~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------- 226 (348)
+.+||-.|++.|. ++..|++++.. |.++ +.+....+.+.+.+... ..++.++.+|+.+...
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGAN-VVLTYNGAAEGAATAVAEIEKL-------GRSALAIKADLTNAAEVEAAISA 79 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECSSCHHHHHHHHHHHTT-------TSCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhc-------CCceEEEEcCCCCHHHHHHHHHH
Confidence 4578888876652 45556666664 7777 66666666555544332 3457888889877431
Q ss_pred ---CCCceeEEeechhhh-------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 018970 227 ---ETGRYDVIWVQWCIG-------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ---~~~~fD~Ii~~~~l~-------~~~~~d~~-----------~~l~~~~~~LkpgG~lii~~ 269 (348)
..+..|+++.+.... ..+.+++. .+.+.+...|+++|.+++..
T Consensus 80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 014789998754322 22323322 34456666676778777654
No 419
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=75.73 E-value=4 Score=39.74 Aligned_cols=90 Identities=13% Similarity=-0.009 Sum_probs=54.2
Q ss_pred CCCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 155 ~~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
..++.+|+-+|+|. |......+......|+++|.++..++.|.+.- .++ .++.+.. ...|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G-------------a~~--~~l~e~l---~~aDv 332 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG-------------FDV--VTVEEAI---GDADI 332 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------------CEE--CCHHHHG---GGCSE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------------CEE--ecHHHHH---hCCCE
Confidence 35678999999975 54444444433337999999998877765421 111 2222211 35799
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|+..-.-.++- -....+.|||||+++...
T Consensus 333 Vi~atgt~~~i-------~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 333 VVTATGNKDII-------MLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp EEECSSSSCSB-------CHHHHHHSCTTCEEEECS
T ss_pred EEECCCCHHHH-------HHHHHHhcCCCcEEEEeC
Confidence 98753222211 124556789999987654
No 420
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=75.66 E-value=11 Score=33.36 Aligned_cols=84 Identities=14% Similarity=0.142 Sum_probs=52.9
Q ss_pred CcEEEEec-cc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 159 LVALDCGS-GI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 159 ~~VLDvGc-G~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.+|.=||+ |. |. ++..|+..+. +|+++|.++..++.+.+. | +.+ .+..+. -...|+|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~----g---------~~~--~~~~~~---~~~aDvVi 72 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM----G---------IPL--TDGDGW---IDEADVVV 72 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT----T---------CCC--CCSSGG---GGTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc----C---------CCc--CCHHHH---hcCCCEEE
Confidence 47999999 85 33 4555555555 599999999888776551 1 111 122111 13579988
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~li 266 (348)
..-. +.....+++.+...++||..++
T Consensus 73 ~av~-----~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 73 LALP-----DNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ECSC-----HHHHHHHHHHHGGGSCTTCEEE
T ss_pred EcCC-----chHHHHHHHHHHHhCCCCCEEE
Confidence 6543 2245678888888888876554
No 421
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=75.29 E-value=13 Score=32.88 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=55.4
Q ss_pred CcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|+=||+|. |. ++..|+..+. +|+++|.+++.++..++.-............++.+. +..+....-..+|+|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIF--SPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEE--CGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceee--cchhhcccCCCCCEEEE
Confidence 4789999985 33 4455555555 599999999888777654100000000000001111 11111100026899887
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
.-.-. ....+++.+...++|+..++..
T Consensus 81 ~v~~~-----~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 81 LTKAQ-----QLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CSCHH-----HHHHHHHHHGGGCCTTCEEEEC
T ss_pred Eeccc-----cHHHHHHHHHHhcCCCCEEEEe
Confidence 54422 4567888888889887766553
No 422
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=73.88 E-value=6.4 Score=31.27 Aligned_cols=96 Identities=9% Similarity=-0.001 Sum_probs=51.9
Q ss_pred CCCCcEEEEeccc-cHHH-HHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---C-CCC
Q 018970 156 NQHLVALDCGSGI-GRIT-KNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---P-ETG 229 (348)
Q Consensus 156 ~~~~~VLDvGcG~-G~~~-~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~-~~~ 229 (348)
.++.+|+-+|||. |... ..|...+. .|+++|.++..++.+++ . ....+...|..+.. . .-.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~---------~g~~~~~~d~~~~~~l~~~~~~ 83 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---E---------FSGFTVVGDAAEFETLKECGME 83 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---T---------CCSEEEESCTTSHHHHHTTTGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---c---------CCCcEEEecCCCHHHHHHcCcc
Confidence 4567899999875 4433 33333344 69999998876643321 1 11334445543311 1 123
Q ss_pred ceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 230 ~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+|+|+..-. ++.....+..+.+.+.|...++...
T Consensus 84 ~ad~Vi~~~~-----~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 84 KADMVFAFTN-----DDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp GCSEEEECSS-----CHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred cCCEEEEEeC-----CcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 6898887533 1133344445555556666666544
No 423
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=73.63 E-value=12 Score=32.72 Aligned_cols=105 Identities=19% Similarity=0.105 Sum_probs=62.5
Q ss_pred CCCcEEEEeccccH---HHHHHHHhCCCcEEEEcC-CHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC------
Q 018970 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (348)
Q Consensus 157 ~~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~-S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------ 226 (348)
.+.+||-.|++.|. ++..|++++.. |.+++. +...++...+.+... ..++.++.+|+.+...
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYVNAAERAQAVVSEIEQA-------GGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHH
Confidence 34578888877652 45556666664 877754 445555544444321 3457788889877431
Q ss_pred ----CCCceeEEeechhhh------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 018970 227 ----ETGRYDVIWVQWCIG------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ----~~~~fD~Ii~~~~l~------~~~~~d~~-----------~~l~~~~~~LkpgG~lii~~ 269 (348)
..+..|+++.+-.+. ..+.+++. .+++.+...|+.+|.+++..
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 013689998754332 22333332 34667777888888887754
No 424
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=73.55 E-value=7.5 Score=34.81 Aligned_cols=89 Identities=13% Similarity=0.026 Sum_probs=51.3
Q ss_pred CCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEE-EcCCCCCCCCCCceeE
Q 018970 156 NQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF-CVPLQDFTPETGRYDV 233 (348)
Q Consensus 156 ~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~-~~d~~~~~~~~~~fD~ 233 (348)
-.+.+|+=||+|. |......+.....+|++.|.++...+.+.+ .. +... ..++.++. ...|+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g------------~~~~~~~~l~~~l---~~aDv 218 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITE-MG------------LVPFHTDELKEHV---KDIDI 218 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT------------CEEEEGGGHHHHS---TTCSE
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CC------------CeEEchhhHHHHh---hCCCE
Confidence 3567999999975 433333333332379999999876554433 11 1111 12222221 46899
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
|+..-..+.+. . .....+|||+.++-.
T Consensus 219 Vi~~~p~~~i~--~------~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 219 CINTIPSMILN--Q------TVLSSMTPKTLILDL 245 (300)
T ss_dssp EEECCSSCCBC--H------HHHTTSCTTCEEEEC
T ss_pred EEECCChhhhC--H------HHHHhCCCCCEEEEE
Confidence 99877765544 1 244678999877654
No 425
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=73.36 E-value=1.6 Score=34.70 Aligned_cols=41 Identities=15% Similarity=0.073 Sum_probs=28.5
Q ss_pred CCCCceeEEeechhhh-cCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 226 PETGRYDVIWVQWCIG-HLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~-~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
.+.++||+|+....-. ... .-...++..+...|||||.|.-
T Consensus 55 Lp~stYD~V~~lt~~~~~~~-~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQTDI-KFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSSCSC-CCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCccchh-hcCHHHHHHHHHHhCCCCEEEe
Confidence 3457999998643222 101 0137899999999999999865
No 426
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=73.31 E-value=13 Score=34.29 Aligned_cols=101 Identities=13% Similarity=0.041 Sum_probs=59.2
Q ss_pred CCcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCC-CcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM-APDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 158 ~~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~-~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
..+|.=||+|. |. ++..|+..+. .|++.|.+++.++..++.-....+. +.....++.+. .|+.+. -...|+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea---~~~aDvV 103 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS---LEGVTDI 103 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH---HTTCCEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH---HhcCCEE
Confidence 35899999985 43 4455554555 5999999999888777653211110 00111122221 222111 1346888
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
+..- +......+++.+...|+|+-.++..
T Consensus 104 ilaV-----p~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 104 LIVV-----PSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp EECC-----CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EECC-----CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8653 3335678899999999888766543
No 427
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=73.01 E-value=21 Score=29.88 Aligned_cols=91 Identities=12% Similarity=0.077 Sum_probs=54.1
Q ss_pred cEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCCceeE
Q 018970 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYDV 233 (348)
Q Consensus 160 ~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD~ 233 (348)
+|+=+|+|. |. ++..|...+. .|+++|.+++.++...+.. ...+..+|..+.. ..-..+|+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~------------~~~~i~gd~~~~~~l~~a~i~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL------------KATIIHGDGSHKEILRDAEVSKNDV 68 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS------------SSEEEESCTTSHHHHHHHTCCTTCE
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc------------CCeEEEcCCCCHHHHHhcCcccCCE
Confidence 578888754 22 2333333455 5999999999887765432 2456777776532 11246788
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
|++... ++.....+..+.+.+.|...++..
T Consensus 69 vi~~~~-----~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 69 VVILTP-----RDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp EEECCS-----CHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred EEEecC-----CcHHHHHHHHHHHHHcCCCeEEEE
Confidence 886432 223344555666666677776664
No 428
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=71.45 E-value=3.3 Score=35.91 Aligned_cols=87 Identities=15% Similarity=0.143 Sum_probs=51.5
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCC---CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~---~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
.+|.=||||. | .++..|++.+. ..|++.|.+++.++.+.+... +.. ..+..+.. ...|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g------------~~~-~~~~~e~~---~~aDv 66 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYG------------LTT-TTDNNEVA---KNADI 66 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHC------------CEE-CSCHHHHH---HHCSE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhC------------CEE-eCChHHHH---HhCCE
Confidence 3688899986 3 35566666664 269999999988877765432 111 11111110 24688
Q ss_pred EeechhhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 018970 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (348)
Q Consensus 234 Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~li 266 (348)
|+..- ++.....+++.+...++||..++
T Consensus 67 Vilav-----~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 67 LILSI-----KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp EEECS-----CTTTHHHHC---CCSSCTTCEEE
T ss_pred EEEEe-----CHHHHHHHHHHHHhhcCCCCEEE
Confidence 88654 23356778888888888776554
No 429
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=71.37 E-value=5.6 Score=35.03 Aligned_cols=104 Identities=16% Similarity=0.106 Sum_probs=64.8
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--------- 225 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------- 225 (348)
+.++|--|++.|. .+..|++.+.. |..+|.+++.++.+.+.+... +.++.++.+|+.+..
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~-Vvi~~~~~~~~~~~~~~l~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGAR-VILNDIRATLLAESVDTLTRK-------GYDAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCE-EEECCSCHHHHHHHHHHHHHT-------TCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhc-------CCcEEEEEeeCCCHHHHHHHHHHH
Confidence 4567777776653 45666666774 999999999888776665443 345777788887642
Q ss_pred -CCCCceeEEeechh------hhcCChhhHHH-----------HHHHHHHcC---CCCcEEEEEe
Q 018970 226 -PETGRYDVIWVQWC------IGHLTDDDFVS-----------FFKRAKVGL---KPGGFFVLKE 269 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~------l~~~~~~d~~~-----------~l~~~~~~L---kpgG~lii~~ 269 (348)
..-++.|+++.+-. +..++++++.. +.+.+...| +.+|.++...
T Consensus 81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnis 145 (255)
T 4g81_D 81 DAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIG 145 (255)
T ss_dssp HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEe
Confidence 12367899986543 33344444433 234455555 2467777654
No 430
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=71.26 E-value=30 Score=30.33 Aligned_cols=88 Identities=17% Similarity=0.091 Sum_probs=53.7
Q ss_pred CcEEEEeccc-c-HHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 159 LVALDCGSGI-G-RITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
.+|.=||+|. | .++..|+..+ ...|+++|.++..++.+.+. |. ......+..+.. ...|+|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~--------~~~~~~~~~~~~---~~aDvVi 71 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER----GI--------VDEATADFKVFA---ALADVII 71 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT----TS--------CSEEESCTTTTG---GGCSEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc----CC--------cccccCCHHHhh---cCCCEEE
Confidence 4789999986 3 3455555554 23699999999888766542 11 111223433321 3579888
Q ss_pred echhhhcCChhhHHHHHHHHHHc-CCCCcEEE
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVG-LKPGGFFV 266 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~-LkpgG~li 266 (348)
..-... ....+++.+... |++|..++
T Consensus 72 lavp~~-----~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 72 LAVPIK-----KTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ECSCHH-----HHHHHHHHHHTSCCCTTCEEE
T ss_pred EcCCHH-----HHHHHHHHHHhcCCCCCCEEE
Confidence 754433 345677888887 88776554
No 431
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=70.61 E-value=1.7 Score=40.85 Aligned_cols=42 Identities=14% Similarity=0.007 Sum_probs=30.9
Q ss_pred CCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHH
Q 018970 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (348)
Q Consensus 157 ~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~ 198 (348)
++.+|+=+|+|. |..+..++......|+++|.++.-++.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 578999999985 555555554433369999999887777765
No 432
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=70.51 E-value=8.9 Score=32.77 Aligned_cols=75 Identities=16% Similarity=0.080 Sum_probs=49.6
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--------- 225 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------- 225 (348)
+.+||-.|++.|. ++..|++++. +|.+++.++..++...+.+... ..++.++.+|+.+..
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEK-------GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCceEEEEecCCCHHHHHHHHHHH
Confidence 3578888876542 4555665666 5999999988887776655432 245788888987743
Q ss_pred -CCCCceeEEeechhh
Q 018970 226 -PETGRYDVIWVQWCI 240 (348)
Q Consensus 226 -~~~~~fD~Ii~~~~l 240 (348)
...+..|+++.+-.+
T Consensus 77 ~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 77 KAENLAIDILVNNAGI 92 (247)
T ss_dssp HHTTCCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 012468999876443
No 433
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=69.65 E-value=11 Score=33.70 Aligned_cols=88 Identities=14% Similarity=-0.006 Sum_probs=50.2
Q ss_pred CCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEE-cCCCCCCCCCCceeEE
Q 018970 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (348)
Q Consensus 157 ~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~fD~I 234 (348)
.+.+|+=||+|. |......+.....+|+++|.++...+.+.+ .. +.+.. .++.++- ...|+|
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g------------~~~~~~~~l~~~l---~~aDvV 217 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MG------------MEPFHISKAAQEL---RDVDVC 217 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT------------SEEEEGGGHHHHT---TTCSEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CC------------CeecChhhHHHHh---cCCCEE
Confidence 467899999875 443333333322379999999876554432 11 11211 1222211 468999
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
+..-..+.+. . .....+|||++++-.
T Consensus 218 i~~~p~~~i~--~------~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 218 INTIPALVVT--A------NVLAEMPSHTFVIDL 243 (293)
T ss_dssp EECCSSCCBC--H------HHHHHSCTTCEEEEC
T ss_pred EECCChHHhC--H------HHHHhcCCCCEEEEe
Confidence 9876665444 1 234468999877654
No 434
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=69.39 E-value=22 Score=30.72 Aligned_cols=100 Identities=13% Similarity=0.087 Sum_probs=55.4
Q ss_pred CCcEEEEecc----ccH-HHHHHHHhCCCcEEEEcCCH---HHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----
Q 018970 158 HLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (348)
Q Consensus 158 ~~~VLDvGcG----~G~-~~~~la~~~~~~v~~vD~S~---~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---- 225 (348)
+.+||-.|++ .|. ++..|++++. +|.+++.++ ..++...+... ...++.+|+.+..
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-----------~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-----------SDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT-----------CCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC-----------CcEEEEccCCCHHHHHH
Confidence 3578888875 232 3444555565 499998776 23333322211 2357778887642
Q ss_pred ------CCCCceeEEeechhhhc-----------CChhhHHH-----------HHHHHHHcCCCCcEEEEEe
Q 018970 226 ------PETGRYDVIWVQWCIGH-----------LTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ------~~~~~fD~Ii~~~~l~~-----------~~~~d~~~-----------~l~~~~~~LkpgG~lii~~ 269 (348)
...+..|+++.+-.+.. .+.+++.. +++.+...++++|.++...
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 11247899987654332 33333332 3445556665678777654
No 435
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=69.24 E-value=8.2 Score=35.76 Aligned_cols=116 Identities=13% Similarity=0.112 Sum_probs=67.0
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|.=||+|. | .++..|+..++ .|++.|.++..++.+.+. + +.+ ..++.++.......|+|++
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~----g---------~~~-~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE----G---------IAG-ARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT----T---------CBC-CSSHHHHHHHSCSSCEEEE
T ss_pred CEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC----C---------CEE-eCCHHHHHhcCCCCCEEEE
Confidence 5799999985 3 34555665665 599999999877766432 1 110 1121111101123498887
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEEe
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKSK 307 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~~ 307 (348)
+-.-. ....+++.+...|++|.+++-..... ..+...+.+.+++.|...+...
T Consensus 88 ~vp~~-----~v~~vl~~l~~~l~~g~iiId~st~~-------------~~~~~~~~~~l~~~g~~~vdap 140 (358)
T 4e21_A 88 MVPAA-----VVDSMLQRMTPLLAANDIVIDGGNSH-------------YQDDIRRADQMRAQGITYVDVG 140 (358)
T ss_dssp CSCGG-----GHHHHHHHHGGGCCTTCEEEECSSCC-------------HHHHHHHHHHHHTTTCEEEEEE
T ss_pred eCCHH-----HHHHHHHHHHhhCCCCCEEEeCCCCC-------------hHHHHHHHHHHHHCCCEEEeCC
Confidence 54322 45678888999998876654322111 0123345667777788776643
No 436
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=68.70 E-value=9.8 Score=33.80 Aligned_cols=105 Identities=14% Similarity=0.039 Sum_probs=61.7
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCC--HHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPV--SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S--~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------ 226 (348)
+.+||-.|++.|. ++..|++++.. |.+++.+ ....+...+..... +.++.++.+|+.+...
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGAD-VAINYLPAEEEDAQQVKALIEEC-------GRKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECCGGGHHHHHHHHHHHHHT-------TCCEEECCCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchhHHHHHHHHHHHc-------CCcEEEEEecCCCHHHHHHHHH
Confidence 4578888876552 44555656664 8888876 33444444433221 2357777888876420
Q ss_pred ----CCCceeEEeechhhh-------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEec
Q 018970 227 ----ETGRYDVIWVQWCIG-------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ----~~~~fD~Ii~~~~l~-------~~~~~d~~-----------~~l~~~~~~LkpgG~lii~~~ 270 (348)
..+..|+++.+.... .++.+++. .+++.+...++.+|.|++...
T Consensus 121 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 121 KAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 014689998754432 22333332 345667778888898887643
No 437
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=68.50 E-value=9.8 Score=33.84 Aligned_cols=112 Identities=16% Similarity=0.163 Sum_probs=64.1
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|.=||||. | .++..|+..++ +|++.|.+++.++.+.+. + +.+ ..+..+.. ...|+|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~----g---------~~~-~~~~~~~~---~~aDvvi~ 65 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA----G---------ASA-ARSARDAV---QGADVVIS 65 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT----T---------CEE-CSSHHHHH---TTCSEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC----C---------CeE-cCCHHHHH---hCCCeEEE
Confidence 4788999996 3 34555665666 599999999888776543 1 111 11221111 24688886
Q ss_pred chhhhcCChhhHHHHHH---HHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 237 QWCIGHLTDDDFVSFFK---RAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~---~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
+-.- +.+...++. .+...+++|..++-..... .-+...+.+.+.+.|...+.
T Consensus 66 ~vp~----~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~-------------~~~~~~l~~~~~~~g~~~~~ 120 (302)
T 2h78_A 66 MLPA----SQHVEGLYLDDDGLLAHIAPGTLVLECSTIA-------------PTSARKIHAAARERGLAMLD 120 (302)
T ss_dssp CCSC----HHHHHHHHHSSSCGGGSSCSSCEEEECSCCC-------------HHHHHHHHHHHHHTTCCEEE
T ss_pred ECCC----HHHHHHHHcCchhHHhcCCCCcEEEECCCCC-------------HHHHHHHHHHHHHcCCEEEE
Confidence 4321 124556666 6777888876554322110 01223466667777776654
No 438
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=68.40 E-value=1.4 Score=41.82 Aligned_cols=42 Identities=12% Similarity=0.016 Sum_probs=32.1
Q ss_pred CCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHH
Q 018970 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (348)
Q Consensus 157 ~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~ 198 (348)
++.+|+-+|+|. |..+..++......|+++|.++.-++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 567999999996 555555555444479999999988888876
No 439
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=68.05 E-value=4 Score=37.76 Aligned_cols=67 Identities=21% Similarity=0.268 Sum_probs=40.9
Q ss_pred CCCCcEEEEecc-ccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC---CCCCce
Q 018970 156 NQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETGRY 231 (348)
Q Consensus 156 ~~~~~VLDvGcG-~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~f 231 (348)
.+..+||=+||| .|......+.+.+ .|+..|.+...++.+++. +.....|+.+.. ..-...
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~~~-~v~~~~~~~~~~~~~~~~--------------~~~~~~d~~d~~~l~~~~~~~ 78 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKDEF-DVYIGDVNNENLEKVKEF--------------ATPLKVDASNFDKLVEVMKEF 78 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTTS-EEEEEESCHHHHHHHTTT--------------SEEEECCTTCHHHHHHHHTTC
T ss_pred CCccEEEEECCCHHHHHHHHHHhcCC-CeEEEEcCHHHHHHHhcc--------------CCcEEEecCCHHHHHHHHhCC
Confidence 455789999996 3554444444444 599999998887766432 344556765532 001357
Q ss_pred eEEeec
Q 018970 232 DVIWVQ 237 (348)
Q Consensus 232 D~Ii~~ 237 (348)
|+|++.
T Consensus 79 DvVi~~ 84 (365)
T 3abi_A 79 ELVIGA 84 (365)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 998864
No 440
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=67.97 E-value=3.8 Score=35.52 Aligned_cols=103 Identities=21% Similarity=0.116 Sum_probs=59.4
Q ss_pred CCcEEEEeccccHHH----HHHHH-hCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-----C
Q 018970 158 HLVALDCGSGIGRIT----KNLLI-RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E 227 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~----~~la~-~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~ 227 (348)
+.+||-.|++ |.++ ..|++ .+. .|.+++-++..++...+.+... ..++.+..+|+.+... .
T Consensus 4 ~k~vlITGas-ggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~~~~~~~~~~~ 74 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAE-------GLSPRFHQLDIDDLQSIRALRD 74 (276)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHT-------TCCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhc-------CCeeEEEECCCCCHHHHHHHHH
Confidence 4567877754 4444 44454 455 5999998887666655544321 2357788889876421 0
Q ss_pred -----CCceeEEeechhhhcC-----C-hhhH-----------HHHHHHHHHcCCCCcEEEEEe
Q 018970 228 -----TGRYDVIWVQWCIGHL-----T-DDDF-----------VSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 228 -----~~~fD~Ii~~~~l~~~-----~-~~d~-----------~~~l~~~~~~LkpgG~lii~~ 269 (348)
.+.+|+||.+-..... + .+++ ..+++.+...++++|.+++..
T Consensus 75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 75 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 1368999865433211 1 1222 234556666666678777753
No 441
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=67.71 E-value=14 Score=31.62 Aligned_cols=74 Identities=16% Similarity=0.064 Sum_probs=49.5
Q ss_pred CCCCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------C
Q 018970 156 NQHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (348)
Q Consensus 156 ~~~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~ 226 (348)
.++.+||-.|++.|. ++..|++++. .|.+++.++..++...+.+.. .+.+..+|+.+.. .
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~D~~~~~~~~~~~~ 80 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKD----------NYTIEVCNLANKEECSNLIS 80 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCS----------SEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhcc----------CccEEEcCCCCHHHHHHHHH
Confidence 455688888876552 4455555666 599999999888877766532 4777888887632 1
Q ss_pred CCCceeEEeechhh
Q 018970 227 ETGRYDVIWVQWCI 240 (348)
Q Consensus 227 ~~~~fD~Ii~~~~l 240 (348)
..+..|+++.+..+
T Consensus 81 ~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 81 KTSNLDILVCNAGI 94 (249)
T ss_dssp TCSCCSEEEECCC-
T ss_pred hcCCCCEEEECCCC
Confidence 12468999876543
No 442
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=67.66 E-value=1.1 Score=42.04 Aligned_cols=42 Identities=17% Similarity=0.111 Sum_probs=31.4
Q ss_pred CCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHH
Q 018970 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (348)
Q Consensus 157 ~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~ 198 (348)
++.+|+=+|+|. |..+..++......|+++|.++.-++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 567999999986 555555554433369999999998888876
No 443
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=66.83 E-value=15 Score=31.90 Aligned_cols=105 Identities=18% Similarity=0.131 Sum_probs=63.1
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcC-CHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~-S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------- 226 (348)
+.++|-.|++.|. ++..|++++.. |.+++. +...++...+.+... ..++.++.+|+.+...
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~ 89 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAK-VVVNYANSTKDAEKVVSEIKAL-------GSDAIAIKADIRQVPEIVKLFDQ 89 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHH
Confidence 4578888876553 45556666664 877664 555555554444322 3457888889877431
Q ss_pred ---CCCceeEEeechhhhc------CChhhHH-----------HHHHHHHHcCCCCcEEEEEec
Q 018970 227 ---ETGRYDVIWVQWCIGH------LTDDDFV-----------SFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ---~~~~fD~Ii~~~~l~~------~~~~d~~-----------~~l~~~~~~LkpgG~lii~~~ 270 (348)
..+..|+++.+-.+.. ++.+++. .+.+.+...|+.+|.+++...
T Consensus 90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 0136899986544332 2333332 345677778888888887654
No 444
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=66.81 E-value=14 Score=33.45 Aligned_cols=100 Identities=13% Similarity=0.064 Sum_probs=55.3
Q ss_pred CcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCC--cceeEEEcCCCCCCCCCCceeEE
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH--KATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.+|+=||+|. |. ++..|+..+. +|+++|.+++.++..++...-. +...... .++.....+..+. -..+|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~D~v 79 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAII-AEGPGLAGTAHPDLLTSDIGLA---VKDADVI 79 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEE-EESSSCCEEECCSEEESCHHHH---HTTCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcCCeE-EeccccccccccceecCCHHHH---HhcCCEE
Confidence 4799999986 33 4445554555 5999999998888776652100 0000000 0000111122111 1357988
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
+..-.-. ....+++.+...+++|..++..
T Consensus 80 i~~v~~~-----~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 80 LIVVPAI-----HHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EECSCGG-----GHHHHHHHHGGGCCTTCEEEES
T ss_pred EEeCCch-----HHHHHHHHHHHhCCCCCEEEEc
Confidence 8754333 3457888888889987755443
No 445
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=66.74 E-value=11 Score=34.05 Aligned_cols=99 Identities=10% Similarity=-0.005 Sum_probs=54.6
Q ss_pred CCCcEEEEeccc-c-HHHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeE
Q 018970 157 QHLVALDCGSGI-G-RITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (348)
Q Consensus 157 ~~~~VLDvGcG~-G-~~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~ 233 (348)
+..+|.=||+|. | .++..++.++. .++..+|++++....+.+...-. ..++... .|..++ ...|+
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~-------~~~i~~t-~d~~~l----~~aD~ 80 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFN-------LPNVEIS-KDLSAS----AHSKV 80 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHT-------CTTEEEE-SCGGGG----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhc-------CCCeEEe-CCHHHH----CCCCE
Confidence 346899999996 3 25555555554 37999999986333343332100 1234442 454332 35699
Q ss_pred Eeechh------------hhcCChhhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 234 IWVQWC------------IGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 234 Ii~~~~------------l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
|+..-. ...++ -...+++.+.+.. |++++++..|
T Consensus 81 Vi~aag~~~pG~tR~dl~~~n~~--i~~~i~~~i~~~~-p~a~iiv~sN 126 (303)
T 2i6t_A 81 VIFTVNSLGSSQSYLDVVQSNVD--MFRALVPALGHYS-QHSVLLVASQ 126 (303)
T ss_dssp EEECCCC----CCHHHHHHHHHH--HHHHHHHHHHHHT-TTCEEEECSS
T ss_pred EEEcCCCCCCCCCHHHHHHHHHH--HHHHHHHHHHHhC-CCeEEEEcCC
Confidence 987541 11111 2456777777775 9999888654
No 446
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=65.92 E-value=13 Score=32.55 Aligned_cols=104 Identities=18% Similarity=0.124 Sum_probs=62.1
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEE-cCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~v-D~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------- 226 (348)
+.++|-.|++.|. ++..|++++.. |.++ ..++..++...+.+... ..++.+..+|+.+...
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFT-VVINYAGKAAAAEEVAGKIEAA-------GGKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEEESSCSHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhc-------CCeEEEEEcCCCCHHHHHHHHHH
Confidence 4578888876653 45666667775 7766 44555555554444322 2457788889877431
Q ss_pred ---CCCceeEEeechhhh------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 018970 227 ---ETGRYDVIWVQWCIG------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ---~~~~fD~Ii~~~~l~------~~~~~d~~-----------~~l~~~~~~LkpgG~lii~~ 269 (348)
..+..|+++.+-.+. ..+.+++. .+++.+...|+.+|.+++..
T Consensus 99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 014789998765432 22333332 24556677777788877754
No 447
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=65.56 E-value=26 Score=31.47 Aligned_cols=100 Identities=14% Similarity=-0.001 Sum_probs=56.6
Q ss_pred CCcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 158 ~~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
..+|+-||+|. |. ++..|+..+. .|+.+ .+++.++..++.-............++.. ..|... ...+|+|+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~~~----~~~~D~vi 91 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDPSA----VQGADLVL 91 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCGGG----GTTCSEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCHHH----cCCCCEEE
Confidence 45899999995 43 4555554555 59999 88888887765411000000000001111 112221 14689988
Q ss_pred echhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
..---. +...+++.+...++|+..++...
T Consensus 92 lavk~~-----~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 92 FCVKST-----DTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp ECCCGG-----GHHHHHHHHTTTSCTTCEEEEEC
T ss_pred EEcccc-----cHHHHHHHHHHhcCCCCEEEEeC
Confidence 754333 46688899999999887766543
No 448
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=65.50 E-value=17 Score=33.01 Aligned_cols=100 Identities=13% Similarity=-0.024 Sum_probs=58.5
Q ss_pred CcEEEEeccc--cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhC-------CCCCCCcC-----CCcceeEEEcCCCCC
Q 018970 159 LVALDCGSGI--GRITKNLLIRYFNEVDLLEPVSHFLDAARESLA-------PENHMAPD-----MHKATNFFCVPLQDF 224 (348)
Q Consensus 159 ~~VLDvGcG~--G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~-------~~~~~~~~-----~~~~i~~~~~d~~~~ 224 (348)
.+|.=||+|. +.++..++..+++ |++.|.+++.++.+.+.+. ..|+.... ...++.+. .|+.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~-V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHHH
Confidence 4788999996 3456667767775 9999999999988865421 11111000 00122332 233221
Q ss_pred CCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 018970 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (348)
Q Consensus 225 ~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~li 266 (348)
-...|+|+.+-.-. .+-...+++++...++|+-+++
T Consensus 85 ---v~~aDlVieavpe~---~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 85 ---VEGVVHIQECVPEN---LDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp ---TTTEEEEEECCCSC---HHHHHHHHHHHHTTCCSSSEEE
T ss_pred ---HhcCCEEEEeccCC---HHHHHHHHHHHHhhCCCCeEEE
Confidence 13579988643210 0123567889999999887655
No 449
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=65.36 E-value=10 Score=36.22 Aligned_cols=88 Identities=15% Similarity=-0.003 Sum_probs=50.9
Q ss_pred CCCCcEEEEeccc-cHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 156 NQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 156 ~~~~~VLDvGcG~-G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
-.+.+|+-+|+|. |......+.....+|+++|.++.....+... . +...++.+.- ...|+|
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~--G-------------~~v~~Leeal---~~ADIV 279 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMD--G-------------FRLVKLNEVI---RQVDIV 279 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--T-------------CEECCHHHHT---TTCSEE
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHc--C-------------CEeccHHHHH---hcCCEE
Confidence 4567999999997 5444444433333699999998655444321 0 1122333322 356998
Q ss_pred eechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
+....-.++- -.+....+|||++++-.
T Consensus 280 i~atgt~~lI-------~~e~l~~MK~gailINv 306 (435)
T 3gvp_A 280 ITCTGNKNVV-------TREHLDRMKNSCIVCNM 306 (435)
T ss_dssp EECSSCSCSB-------CHHHHHHSCTTEEEEEC
T ss_pred EECCCCcccC-------CHHHHHhcCCCcEEEEe
Confidence 8842222221 12556778999988764
No 450
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=65.17 E-value=13 Score=32.86 Aligned_cols=87 Identities=11% Similarity=-0.009 Sum_probs=54.3
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCCC--cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~~--~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.+|.=||||. | .++..++..+.. .|++.|.+++.++.+.+... +.+. .+..+.. ...|+|
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g------------i~~~-~~~~~~~---~~aDvV 67 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG------------VHTT-QDNRQGA---LNADVV 67 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC------------CEEE-SCHHHHH---SSCSEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC------------CEEe-CChHHHH---hcCCeE
Confidence 4788999986 3 355556666642 69999999988877765431 2221 1211111 246988
Q ss_pred eechhhhcCChhhHHHHHHHHHHc-CCCCcEEE
Q 018970 235 WVQWCIGHLTDDDFVSFFKRAKVG-LKPGGFFV 266 (348)
Q Consensus 235 i~~~~l~~~~~~d~~~~l~~~~~~-LkpgG~li 266 (348)
+..-. +.....+++++... ++++-.++
T Consensus 68 ilav~-----p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 68 VLAVK-----PHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp EECSC-----GGGHHHHHHHHHHHHHTTTCEEE
T ss_pred EEEeC-----HHHHHHHHHHHHhhccCCCeEEE
Confidence 87543 33567888888887 77654443
No 451
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=65.15 E-value=15 Score=32.63 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=63.7
Q ss_pred CCcEEEEecc----ccH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC------
Q 018970 158 HLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ 226 (348)
Q Consensus 158 ~~~VLDvGcG----~G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------ 226 (348)
+.+||-.|++ .|. ++..|++.+.. |.+++.++...+.+.+.... ...+.++.+|+.+...
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAE-VALTYLSETFKKRVDPLAES--------LGVKLTVPCDVSDAESVDNMFK 100 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHH--------HTCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHh--------cCCeEEEEcCCCCHHHHHHHHH
Confidence 4578989974 343 56666666765 99999887655555443322 1235678888877431
Q ss_pred ----CCCceeEEeechhhh----------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEec
Q 018970 227 ----ETGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 227 ----~~~~fD~Ii~~~~l~----------~~~~~d~~-----------~~l~~~~~~LkpgG~lii~~~ 270 (348)
..+..|++|.+-.+. ..+.+++. .+++.+...|+.+|.+++...
T Consensus 101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 014689998765432 23333332 345566777778888887643
No 452
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=65.15 E-value=18 Score=31.90 Aligned_cols=100 Identities=14% Similarity=0.080 Sum_probs=56.4
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCC---------CCCCcCC---CcceeEEEcCCCCC
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE---------NHMAPDM---HKATNFFCVPLQDF 224 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~---------~~~~~~~---~~~i~~~~~d~~~~ 224 (348)
.+|.=||+|. | .++..++..+. +|++.|.+++.++.+.+.+... ++..... ..++.+ ..|+.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4788899986 3 34555555566 5999999999998887652110 0000000 011222 2233221
Q ss_pred CCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 018970 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (348)
Q Consensus 225 ~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~li 266 (348)
-...|+|+..-.-. .+....+++++...++|+..++
T Consensus 83 ---~~~aDlVi~av~~~---~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 ---VKDADLVIEAVPES---LDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp ---TTTCSEEEECCCSC---HHHHHHHHHHHHHHSCTTCEEE
T ss_pred ---hccCCEEEEeccCc---HHHHHHHHHHHHhhCCCCcEEE
Confidence 13578888643211 1134577889999999887654
No 453
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=64.72 E-value=40 Score=28.41 Aligned_cols=92 Identities=12% Similarity=0.007 Sum_probs=55.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC--cEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCCc
Q 018970 157 QHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (348)
Q Consensus 157 ~~~~VLDvGcG~G~~~~~la~~~~~--~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~ 230 (348)
...+|+=+||| .++..++..... .|+++|.++..++.+. . .+.+..+|..+.. ..-..
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~v~vid~~~~~~~~~~---~-----------~~~~i~gd~~~~~~l~~a~i~~ 71 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEVFVLAEDENVRKKVLR---S-----------GANFVHGDPTRVSDLEKANVRG 71 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEEEEEESCGGGHHHHHH---T-----------TCEEEESCTTCHHHHHHTTCTT
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCeEEEEECCHHHHHHHh---c-----------CCeEEEcCCCCHHHHHhcCcch
Confidence 34589999884 666666554322 1999999988877664 1 1567778876532 11246
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
.|+|++... ++.....+....+.+.|+..++...
T Consensus 72 ad~vi~~~~-----~d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 72 ARAVIVDLE-----SDSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp CSEEEECCS-----CHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred hcEEEEcCC-----CcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 788886432 2233344455566678877776643
No 454
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=64.53 E-value=20 Score=31.30 Aligned_cols=84 Identities=13% Similarity=0.029 Sum_probs=51.1
Q ss_pred cEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeec
Q 018970 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (348)
Q Consensus 160 ~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~ 237 (348)
+|.=||+|. |. ++..++. +. +|+++|.++..++.+.+.- +... +..+. -...|+|+..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g-------------~~~~--~~~~~---~~~~D~vi~~ 62 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEF-------------GSEA--VPLER---VAEARVIFTC 62 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHH-------------CCEE--CCGGG---GGGCSEEEEC
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCC-------------Cccc--CHHHH---HhCCCEEEEe
Confidence 588899996 44 4555655 55 5999999988777665431 1111 11111 1357998865
Q ss_pred hhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
-.-. .....+++.+...+++|..++.
T Consensus 63 v~~~----~~~~~v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 63 LPTT----REVYEVAEALYPYLREGTYWVD 88 (289)
T ss_dssp CSSH----HHHHHHHHHHTTTCCTTEEEEE
T ss_pred CCCh----HHHHHHHHHHHhhCCCCCEEEE
Confidence 4322 1345677788888888766554
No 455
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=64.01 E-value=16 Score=35.06 Aligned_cols=100 Identities=18% Similarity=0.159 Sum_probs=56.8
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCC-------CCCC-CcCC-CcceeEEEcCCCCCCCC
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAP-------ENHM-APDM-HKATNFFCVPLQDFTPE 227 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~-------~~~~-~~~~-~~~i~~~~~d~~~~~~~ 227 (348)
.+|.-||+|. | .++..++..+. .|+++|.+++.++.+++.+.. .+.. .... .....+ ..|++.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~--- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG---
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH---
Confidence 4799999997 3 34555565566 599999999988877653210 0000 0000 011222 3343221
Q ss_pred CCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 228 ~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
...|+||..-. .. .+-...+++++...++|+.+++.
T Consensus 113 -~~aDlVIeaVp-e~--~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 -STVDLVVEAVF-ED--MNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -TTCSEEEECCC-SC--HHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -CCCCEEEEcCC-CC--HHHHHHHHHHHHhhCCCCeEEEe
Confidence 35798886442 11 01235688889999988876654
No 456
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=63.93 E-value=31 Score=28.97 Aligned_cols=69 Identities=10% Similarity=-0.016 Sum_probs=45.8
Q ss_pred cEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-------CCCC
Q 018970 160 VALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------PETG 229 (348)
Q Consensus 160 ~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~ 229 (348)
+||-.|++.|. ++..|++++.. |.+++-++..++.+.+.+. .++.+..+|+.+.. .-..
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKA-TYLTGRSESKLSTVTNCLS----------NNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTCS----------SCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred EEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHh----------hccCeEeecCCCHHHHHHHHHHHhh
Confidence 57777776552 45556666765 9999999988877766552 34778888887642 1123
Q ss_pred ceeEEeechh
Q 018970 230 RYDVIWVQWC 239 (348)
Q Consensus 230 ~fD~Ii~~~~ 239 (348)
.+|+++.+..
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 4588886544
No 457
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=63.70 E-value=4.3 Score=37.03 Aligned_cols=85 Identities=8% Similarity=0.051 Sum_probs=49.6
Q ss_pred eeEE-EcCCCCC--CCCCCceeEEeechhhhcC------Ch---hhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCC
Q 018970 214 TNFF-CVPLQDF--TPETGRYDVIWVQWCIGHL------TD---DDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKE 281 (348)
Q Consensus 214 i~~~-~~d~~~~--~~~~~~fD~Ii~~~~l~~~------~~---~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~ 281 (348)
..++ ++|..+. ..++++||+|++....... .+ ..+...+..+.++|+|||.+++.......+ + .
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~---~-~ 114 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQG---E-A 114 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCC---C-T
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCccccc---c-c
Confidence 4555 6665432 1234689999986554321 00 135678889999999999999864321100 0 0
Q ss_pred CCceecCHHHHHHHHHhcC-CeEEE
Q 018970 282 DRSITRSDFYFKELFSRCG-LHIYK 305 (348)
Q Consensus 282 ~~~~~~s~~~l~~l~~~aG-f~~v~ 305 (348)
. ......+...+...| |....
T Consensus 115 ~---~~~l~~l~~~i~~~G~~~~~~ 136 (319)
T 1eg2_A 115 G---SGDLISIISHMRQNSKMLLAN 136 (319)
T ss_dssp T---BCCHHHHHHHHHHHCCCEEEE
T ss_pred c---cccHHHHHHHHhCcccceeEE
Confidence 0 012245566666778 87766
No 458
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=63.40 E-value=2.6 Score=37.46 Aligned_cols=42 Identities=29% Similarity=0.457 Sum_probs=29.1
Q ss_pred CCceeEEeech----hhhcCCh-hh----HHHHHHHHHHcCCCCcEEEEEe
Q 018970 228 TGRYDVIWVQW----CIGHLTD-DD----FVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 228 ~~~fD~Ii~~~----~l~~~~~-~d----~~~~l~~~~~~LkpgG~lii~~ 269 (348)
-+.||+|+++. -.||..- +| +..+-+...+.|+|||.+++..
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~a 259 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRA 259 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 37999999852 3344321 22 4455677788999999999875
No 459
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=63.40 E-value=12 Score=32.43 Aligned_cols=103 Identities=15% Similarity=0.156 Sum_probs=58.5
Q ss_pred CCcEEEEeccccHHHHHH----HHhCCCcEEEEcCC---HHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC----
Q 018970 158 HLVALDCGSGIGRITKNL----LIRYFNEVDLLEPV---SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~l----a~~~~~~v~~vD~S---~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---- 226 (348)
+.+||-.|++.| ++..+ ++++. .|.+++.+ ...++...+.+... +.++.++.+|+.+...
T Consensus 11 ~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~ 81 (262)
T 3ksu_A 11 NKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQ-------GAKVALYQSDLSNEEEVAKL 81 (262)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTT-------TCEEEEEECCCCSHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHH
Confidence 457887777654 44444 43444 58887643 34455444444332 3468888899877431
Q ss_pred ------CCCceeEEeechhhh------cCChhhHH-----------HHHHHHHHcCCCCcEEEEEe
Q 018970 227 ------ETGRYDVIWVQWCIG------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ------~~~~fD~Ii~~~~l~------~~~~~d~~-----------~~l~~~~~~LkpgG~lii~~ 269 (348)
..+..|+++.+-.+. ..+.+++. .+++.+...|+++|.+++..
T Consensus 82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 82 FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 014789998754432 23333333 24455566666778877754
No 460
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=63.31 E-value=33 Score=30.81 Aligned_cols=85 Identities=14% Similarity=-0.066 Sum_probs=49.2
Q ss_pred CcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCH-------HHHHHHHHHhCCCCCCCcCCCcceeEEEc-CCCCCCCCC
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVS-------HFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPET 228 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~-------~~l~~a~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~ 228 (348)
.+|.=||+|. |. ++..|+..+...|++.|.++ ..++.+.+ . + + .. +..+..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~----~-------g--~---~~~s~~e~~--- 85 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAE----L-------G--V---EPLDDVAGI--- 85 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHH----T-------T--C---EEESSGGGG---
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHH----C-------C--C---CCCCHHHHH---
Confidence 4799999985 33 45555555613599999987 33333321 1 1 1 22 333322
Q ss_pred CceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 229 ~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
...|+|+++-. +......++.+...|+||..++-
T Consensus 86 ~~aDvVi~avp-----~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 86 ACADVVLSLVV-----GAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp GGCSEEEECCC-----GGGHHHHHHHHGGGCCTTCEEEE
T ss_pred hcCCEEEEecC-----CHHHHHHHHHHHhhcCCCCEEEE
Confidence 34688887433 22344566888888888765543
No 461
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=62.63 E-value=17 Score=32.68 Aligned_cols=113 Identities=11% Similarity=0.089 Sum_probs=64.2
Q ss_pred CCcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEe
Q 018970 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (348)
Q Consensus 158 ~~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii 235 (348)
..+|.=||+|. |. ++..|+..+. +|++.|.+++.++.+.+. | +.+ ..+..+.. ...|+|+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~----g---------~~~-~~~~~e~~---~~aDvVi 92 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAAL----G---------ATI-HEQARAAA---RDADIVV 92 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT----T---------CEE-ESSHHHHH---TTCSEEE
T ss_pred CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC----C---------CEe-eCCHHHHH---hcCCEEE
Confidence 45899999996 43 4555665566 599999999877665432 1 111 12222211 2468888
Q ss_pred echhhhcCChhhHHHHHH--HHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 236 VQWCIGHLTDDDFVSFFK--RAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 236 ~~~~l~~~~~~d~~~~l~--~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
.+-.- +.....++. .+...+++|..++...... .-+...+.+.+.+.|...+.
T Consensus 93 ~~vp~----~~~~~~v~~~~~~~~~l~~~~~vi~~st~~-------------~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 93 SMLEN----GAVVQDVLFAQGVAAAMKPGSLFLDMASIT-------------PREARDHAARLGALGIAHLD 147 (320)
T ss_dssp ECCSS----HHHHHHHHTTTCHHHHCCTTCEEEECSCCC-------------HHHHHHHHHHHHHTTCEEEE
T ss_pred EECCC----HHHHHHHHcchhHHhhCCCCCEEEecCCCC-------------HHHHHHHHHHHHHcCCEEEe
Confidence 64321 124455665 6667788876654432110 01233456667777776654
No 462
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=62.48 E-value=16 Score=32.09 Aligned_cols=105 Identities=19% Similarity=0.164 Sum_probs=58.2
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHH-HHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-----C-
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSH-FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E- 227 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~-~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~- 227 (348)
+.+||-.|++.|. ++..|++++. +|.+++.++. ..+.+.+.+... ..++.+..+|+.+... .
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKN-------GSDAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHh-------CCCeEEEEcCCCCHHHHHHHHHH
Confidence 3567777765542 3444555565 4888887643 233333322211 2357778888876420 0
Q ss_pred ----CCceeEEeechhhhc------CChhhHH-----------HHHHHHHHcCCCCcEEEEEec
Q 018970 228 ----TGRYDVIWVQWCIGH------LTDDDFV-----------SFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 228 ----~~~fD~Ii~~~~l~~------~~~~d~~-----------~~l~~~~~~LkpgG~lii~~~ 270 (348)
.+..|+++.+-.+.. ++.+++. .+++.+...|+.+|.+++...
T Consensus 101 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 136899987654332 2333332 244666777777788877643
No 463
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=62.39 E-value=6.8 Score=35.02 Aligned_cols=86 Identities=15% Similarity=0.126 Sum_probs=53.3
Q ss_pred CcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|.-||+|. |. ++..|+..++ +|++.|.+++.++.+.+. + +.+ ..+..+.. . .|+|+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~----g---------~~~-~~~~~~~~---~-aDvvi~ 76 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEA----G---------ATL-ADSVADVA---A-ADLIHI 76 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHT----T---------CEE-CSSHHHHT---T-SSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHC----C---------CEE-cCCHHHHH---h-CCEEEE
Confidence 4799999986 33 4555555555 599999999877766542 0 111 12222221 3 688886
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
+-.- +.....+++.+...++||..++.
T Consensus 77 ~vp~----~~~~~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 77 TVLD----DAQVREVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp CCSS----HHHHHHHHHHHHTTCCTTCEEEE
T ss_pred ECCC----hHHHHHHHHHHHHhcCCCCEEEE
Confidence 4331 12456778888888988876654
No 464
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=62.37 E-value=26 Score=30.24 Aligned_cols=77 Identities=21% Similarity=0.185 Sum_probs=46.9
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (348)
+.+||-.|++.|. ++..|++++. +|.+++.++..++.+.+.+.... ...++.+..+|+.+...
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQF-----EPQKTLFIQCDVADQQQLRDTFRKV 80 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTS-----CGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhc-----CCCceEEEecCCCCHHHHHHHHHHH
Confidence 3578888875542 4455555566 59999988877766555443210 02357788889876420
Q ss_pred --CCCceeEEeechhh
Q 018970 227 --ETGRYDVIWVQWCI 240 (348)
Q Consensus 227 --~~~~fD~Ii~~~~l 240 (348)
..+..|+++.+-..
T Consensus 81 ~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 81 VDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 01357999876554
No 465
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=62.08 E-value=63 Score=26.91 Aligned_cols=134 Identities=13% Similarity=0.101 Sum_probs=69.4
Q ss_pred CCcEEEEeccccHH----HHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcce-eEEEcCCCC-CCCCCCce
Q 018970 158 HLVALDCGSGIGRI----TKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKAT-NFFCVPLQD-FTPETGRY 231 (348)
Q Consensus 158 ~~~VLDvGcG~G~~----~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i-~~~~~d~~~-~~~~~~~f 231 (348)
+.+||-.|+ +|.+ +..|++++. +|.+++-++..++.... ..+ .+..+|+.+ +...-+..
T Consensus 21 ~~~ilVtGa-tG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~ 85 (236)
T 3e8x_A 21 GMRVLVVGA-NGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRE-------------RGASDIVVANLEEDFSHAFASI 85 (236)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH-------------TTCSEEEECCTTSCCGGGGTTC
T ss_pred CCeEEEECC-CChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHh-------------CCCceEEEcccHHHHHHHHcCC
Confidence 467888886 3433 344444555 59999988876654432 135 778888861 21112468
Q ss_pred eEEeechhhhcCCh-hh--------HHHHHHHHHHcCCCCcEEEEEecccCCCceec-CCCCceecCHHHHHHHHHhcCC
Q 018970 232 DVIWVQWCIGHLTD-DD--------FVSFFKRAKVGLKPGGFFVLKENIARSGFVLD-KEDRSITRSDFYFKELFSRCGL 301 (348)
Q Consensus 232 D~Ii~~~~l~~~~~-~d--------~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d-~~~~~~~~s~~~l~~l~~~aGf 301 (348)
|+|+.+.......+ +. ...+++.+.+. ..|.|++...........+ .....+..+....++++++.|+
T Consensus 86 D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~gi 163 (236)
T 3e8x_A 86 DAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSL 163 (236)
T ss_dssp SEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHHSSS
T ss_pred CEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHHCCC
Confidence 99987655432211 10 12334444332 2356666433221111000 0111122355566778888898
Q ss_pred eEEEEee
Q 018970 302 HIYKSKD 308 (348)
Q Consensus 302 ~~v~~~~ 308 (348)
.+.-...
T Consensus 164 ~~~~lrp 170 (236)
T 3e8x_A 164 DYTIVRP 170 (236)
T ss_dssp EEEEEEE
T ss_pred CEEEEeC
Confidence 8766543
No 466
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=61.76 E-value=11 Score=34.28 Aligned_cols=102 Identities=14% Similarity=0.032 Sum_probs=58.5
Q ss_pred CCcEEEEeccc-c-HHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCC-------CCCCCcCC-----CcceeEEEcCCCC
Q 018970 158 HLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAP-------ENHMAPDM-----HKATNFFCVPLQD 223 (348)
Q Consensus 158 ~~~VLDvGcG~-G-~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~-------~~~~~~~~-----~~~i~~~~~d~~~ 223 (348)
..+|.-||+|+ | .++..++..++. |+..|++++.++.+.+++.. .+...... ..++.+. .|+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cchHh
Confidence 45899999997 3 355556667776 99999999998887664421 11111100 0122222 23221
Q ss_pred CCCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEE
Q 018970 224 FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (348)
Q Consensus 224 ~~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii 267 (348)
. -...|+|+=+ +.+.+. --.++++++-.+++|+-+|.-
T Consensus 84 a---~~~ad~ViEa-v~E~l~--iK~~lf~~l~~~~~~~aIlaS 121 (319)
T 3ado_A 84 A---VEGVVHIQEC-VPENLD--LKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp H---TTTEEEEEEC-CCSCHH--HHHHHHHHHHTTCCSSSEEEE
T ss_pred H---hccCcEEeec-cccHHH--HHHHHHHHHHHHhhhcceeeh
Confidence 1 1346766521 222222 246789999999999877654
No 467
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=61.67 E-value=14 Score=31.93 Aligned_cols=74 Identities=14% Similarity=0.016 Sum_probs=46.4
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (348)
+.+||-.|++.|. ++..|++++. +|.+++.++..++...+.+... ..++.+..+|+.+...
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSK-------GFKVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4578877765442 3445555566 5999999887776655444221 2357788889876420
Q ss_pred --CC-CceeEEeechh
Q 018970 227 --ET-GRYDVIWVQWC 239 (348)
Q Consensus 227 --~~-~~fD~Ii~~~~ 239 (348)
.. +..|+++.+-.
T Consensus 81 ~~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 81 ANHFHGKLNILVNNAG 96 (260)
T ss_dssp HHHTTTCCCEEEECCC
T ss_pred HHHcCCCCCEEEECCC
Confidence 01 57899987654
No 468
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=60.89 E-value=11 Score=35.19 Aligned_cols=94 Identities=20% Similarity=0.181 Sum_probs=57.8
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeec
Q 018970 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~ 237 (348)
+.+||.++-+-|.++..+.. . ..++.+..|.......+.+ |+ .... ...+...+..||+|+..
T Consensus 46 ~~~~l~~n~~~g~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~----~~-------~~~~----~~~~~~~~~~~d~v~~~ 108 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLEG-R-MAVERLETSRAAFRCLTAS----GL-------QARL----ALPWEAAAGAYDLVVLA 108 (381)
T ss_dssp SSEEEESSCTTSTTTGGGBT-T-BEEEEEECBHHHHHHHHHT----TC-------CCEE----CCGGGSCTTCEEEEEEE
T ss_pred CCcEEEecCCCCccccccCC-C-CceEEEeCcHHHHHHHHHc----CC-------Cccc----cCCccCCcCCCCEEEEE
Confidence 36899999999987776642 2 2577776665544443322 11 1111 11122223689999875
Q ss_pred hhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 238 ~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
..=+-- .......|..+.+.|+|||.+++..
T Consensus 109 ~Pk~k~-~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 109 LPAGRG-TAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp CCGGGC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcchh-HHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 552210 0146678999999999999998764
No 469
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=60.35 E-value=27 Score=33.75 Aligned_cols=121 Identities=14% Similarity=0.038 Sum_probs=68.4
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|-=||+|. | .++..|+..++. |++.|.+++.++.+.+.-.. ..++.. ..++.++...-...|+|++
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~g~~--------g~~i~~-~~s~~e~v~~l~~aDvVil 74 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFV-VCAFNRTVSKVDDFLANEAK--------GTKVVG-AQSLKEMVSKLKKPRRIIL 74 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-EEEECSSTHHHHHHHHTTTT--------TSSCEE-CSSHHHHHHTBCSSCEEEE
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhcccC--------CCceec-cCCHHHHHhhccCCCEEEE
Confidence 5788899885 3 345666666764 99999999888776654211 001111 1222221100013588876
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEEE
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYKS 306 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~~ 306 (348)
.-.-. .....+++.+...|+||..++-..+.. ..+...+.+.+++.|...+..
T Consensus 75 ~Vp~~----~~v~~vl~~l~~~L~~g~iIId~st~~-------------~~~t~~~~~~l~~~Gi~fvd~ 127 (484)
T 4gwg_A 75 LVKAG----QAVDDFIEKLVPLLDTGDIIIDGGNSE-------------YRDTTRRCRDLKAKGILFVGS 127 (484)
T ss_dssp CSCSS----HHHHHHHHHHGGGCCTTCEEEECSCCC-------------HHHHHHHHHHHHHTTCEEEEE
T ss_pred ecCCh----HHHHHHHHHHHHhcCCCCEEEEcCCCC-------------chHHHHHHHHHHhhccccccC
Confidence 43221 245678899999999887654432211 012234556677778877664
No 470
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=59.91 E-value=18 Score=31.91 Aligned_cols=60 Identities=18% Similarity=0.088 Sum_probs=37.9
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEc-CCHHHHHHHHHHhC-CCCCCCcCCCcceeEEEcCCCCCC
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLE-PVSHFLDAARESLA-PENHMAPDMHKATNFFCVPLQDFT 225 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD-~S~~~l~~a~~~~~-~~~~~~~~~~~~i~~~~~d~~~~~ 225 (348)
+.++|-.|++.|. ++..|++++. .|.+++ .++..++.+.+.+. .. ..++.++.+|+.+..
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARR-------PNSAITVQADLSNVA 73 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHS-------TTCEEEEECCCSSSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhc-------CCeeEEEEeecCCcc
Confidence 3467777766542 3445555566 599999 88877766655442 11 235778888887754
No 471
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=59.83 E-value=45 Score=27.97 Aligned_cols=70 Identities=23% Similarity=0.199 Sum_probs=42.2
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------CCC
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PET 228 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~ 228 (348)
+.+||-.|++.|. ++..|++++. +|.+++.++..++...+... .+++..+|+.+.. ...
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~~~~~~~~~ 74 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECP-----------GIEPVCVDLGDWDATEKALGGI 74 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST-----------TCEEEECCTTCHHHHHHHHTTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcc-----------CCCcEEecCCCHHHHHHHHHHc
Confidence 4578877764331 3444455565 59999988876665544321 2456677877632 112
Q ss_pred CceeEEeechh
Q 018970 229 GRYDVIWVQWC 239 (348)
Q Consensus 229 ~~fD~Ii~~~~ 239 (348)
+.+|+|+.+..
T Consensus 75 ~~id~vi~~Ag 85 (244)
T 1cyd_A 75 GPVDLLVNNAA 85 (244)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCc
Confidence 46899987644
No 472
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=59.57 E-value=35 Score=30.59 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=52.9
Q ss_pred CcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHH-hCCCCCCCcCCCcceeEE----EcCCCCCCCCCCce
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARES-LAPENHMAPDMHKATNFF----CVPLQDFTPETGRY 231 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~-~~~~~~~~~~~~~~i~~~----~~d~~~~~~~~~~f 231 (348)
.+|+=||+|. |. ++..|++.+. .|+.++-++ .+..++. +.-.+ .......+. ..|..+. ...+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~~Gl~~~~----~~~g~~~~~~~~~~~~~~~~---~~~~ 72 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD--YETVKAKGIRIRS----ATLGDYTFRPAAVVRSAAEL---ETKP 72 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT--HHHHHHHCEEEEE----TTTCCEEECCSCEESCGGGC---SSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh--HHHHHhCCcEEee----cCCCcEEEeeeeeECCHHHc---CCCC
Confidence 4789999995 43 4455554454 699999876 2444443 00000 000111110 1122222 1368
Q ss_pred eEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 232 D~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
|+|+..---..+. .+++.+...++++..++...
T Consensus 73 DlVilavK~~~~~-----~~l~~l~~~l~~~t~Iv~~~ 105 (320)
T 3i83_A 73 DCTLLCIKVVEGA-----DRVGLLRDAVAPDTGIVLIS 105 (320)
T ss_dssp SEEEECCCCCTTC-----CHHHHHTTSCCTTCEEEEEC
T ss_pred CEEEEecCCCChH-----HHHHHHHhhcCCCCEEEEeC
Confidence 9998765544433 57788888898888766543
No 473
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=59.38 E-value=27 Score=30.47 Aligned_cols=69 Identities=16% Similarity=0.078 Sum_probs=42.1
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCH--HHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----CC
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVS--HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~--~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~ 227 (348)
+.++|--|++.|. .+..|++.+.. |..+|.+. +..+..++. +.++.+..+|+.+.. ..
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~-Vvi~~r~~~~~~~~~~~~~-----------g~~~~~~~~Dv~d~~~v~~~~~ 76 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAE-VVCAARRAPDETLDIIAKD-----------GGNASALLIDFADPLAAKDSFT 76 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCCHHHHHHHHHT-----------TCCEEEEECCTTSTTTTTTSST
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCE-EEEEeCCcHHHHHHHHHHh-----------CCcEEEEEccCCCHHHHHHHHH
Confidence 4566777776663 45666666775 88888764 223322221 345778888887643 23
Q ss_pred CCceeEEeech
Q 018970 228 TGRYDVIWVQW 238 (348)
Q Consensus 228 ~~~fD~Ii~~~ 238 (348)
.+..|+++.+-
T Consensus 77 ~g~iDiLVNNA 87 (247)
T 4hp8_A 77 DAGFDILVNNA 87 (247)
T ss_dssp TTCCCEEEECC
T ss_pred hCCCCEEEECC
Confidence 46799998653
No 474
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=59.10 E-value=12 Score=33.03 Aligned_cols=111 Identities=11% Similarity=0.035 Sum_probs=62.9
Q ss_pred cEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEeec
Q 018970 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (348)
Q Consensus 160 ~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~~ 237 (348)
+|.=||+|. |. ++..|+..+.. |++.|.+++.++.+.+.- +.+ ..+..+.. ...|+|+.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~-V~~~dr~~~~~~~~~~~g-------------~~~-~~~~~~~~---~~advvi~~ 64 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFD-VTVWNRNPAKCAPLVALG-------------ARQ-ASSPAEVC---AACDITIAM 64 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCC-EEEECSSGGGGHHHHHHT-------------CEE-CSCHHHHH---HHCSEEEEC
T ss_pred eEEEEccCHHHHHHHHHHHHCCCe-EEEEcCCHHHHHHHHHCC-------------Cee-cCCHHHHH---HcCCEEEEE
Confidence 578889986 33 56666666765 999999998877765531 111 11221111 246888764
Q ss_pred hhhhcCChhhHHHHH---HHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 238 WCIGHLTDDDFVSFF---KRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 238 ~~l~~~~~~d~~~~l---~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
-.-. .....++ +.+...+++|..++-..... ..+...+.+.+.+.|...+.
T Consensus 65 v~~~----~~~~~v~~~~~~l~~~l~~g~~vv~~st~~-------------~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 65 LADP----AAAREVCFGANGVLEGIGGGRGYIDMSTVD-------------DETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp CSSH----HHHHHHHHSTTCGGGTCCTTCEEEECSCCC-------------HHHHHHHHHHHHHTTCEEEE
T ss_pred cCCH----HHHHHHHcCchhhhhcccCCCEEEECCCCC-------------HHHHHHHHHHHHHcCCEEEE
Confidence 3311 2445566 66677788876654322110 01233456667777776554
No 475
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=59.00 E-value=12 Score=32.84 Aligned_cols=74 Identities=16% Similarity=0.058 Sum_probs=48.0
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (348)
+.++|-.|++.|. ++..|++++. .|.+++.++..++.+.+.+... ..++.+..+|+.+...
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIAS-------GGTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHT-------TCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhc-------CCeEEEEEecCCCHHHHHHHHHHH
Confidence 4578877876542 4555565666 5999998887776665554322 3457888889877541
Q ss_pred -CCCceeEEeechh
Q 018970 227 -ETGRYDVIWVQWC 239 (348)
Q Consensus 227 -~~~~fD~Ii~~~~ 239 (348)
..+..|+++.+..
T Consensus 105 ~~~g~iD~lvnnAg 118 (275)
T 4imr_A 105 EAIAPVDILVINAS 118 (275)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 0146899987544
No 476
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=58.68 E-value=5.1 Score=35.95 Aligned_cols=68 Identities=24% Similarity=0.284 Sum_probs=40.8
Q ss_pred CceeEEeechh----hhc-C--Ch-h-hHHHHHHHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhc
Q 018970 229 GRYDVIWVQWC----IGH-L--TD-D-DFVSFFKRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRC 299 (348)
Q Consensus 229 ~~fD~Ii~~~~----l~~-~--~~-~-d~~~~l~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~a 299 (348)
+.||+|++.+. -|| - .| . -+.-+++.+.++|+|||.|++.-.-. .+ +..+.+...+++
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg--------aD----r~se~lv~~LaR- 271 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY--------AD----RASESIIGAIAR- 271 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC--------CS----HHHHHHHHHHHT-
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC--------Cc----ccHHHHHHHHHH-
Confidence 67999998543 233 1 11 0 13336788899999999999986321 11 234556666655
Q ss_pred CCeEEEEeec
Q 018970 300 GLHIYKSKDQ 309 (348)
Q Consensus 300 Gf~~v~~~~~ 309 (348)
-|+.+.....
T Consensus 272 ~F~~Vr~vKP 281 (320)
T 2hwk_A 272 QFKFSRVCKP 281 (320)
T ss_dssp TEEEEEEECC
T ss_pred hcceeeeeCC
Confidence 3665554443
No 477
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=58.65 E-value=22 Score=32.34 Aligned_cols=97 Identities=10% Similarity=0.069 Sum_probs=52.8
Q ss_pred CCCCCcEEEEec--cccHHHHHHHHh-CCCcEEEEcCCHH---HHHHHHHHhCCCCCCCcCCCcceeEEE---cCCCCCC
Q 018970 155 NNQHLVALDCGS--GIGRITKNLLIR-YFNEVDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFC---VPLQDFT 225 (348)
Q Consensus 155 ~~~~~~VLDvGc--G~G~~~~~la~~-~~~~v~~vD~S~~---~l~~a~~~~~~~~~~~~~~~~~i~~~~---~d~~~~~ 225 (348)
+.++.+||-+|+ |.|.++..+++. +...+..++.++. ..+.+++ +.. ..-++... .++.+..
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~-lGa--------~~vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKS-LGA--------EHVITEEELRRPEMKNFF 235 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHH-TTC--------SEEEEHHHHHSGGGGGTT
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHh-cCC--------cEEEecCcchHHHHHHHH
Confidence 678889999997 468888888865 4433445554432 3455543 221 00011100 1121221
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
...+.+|+|+-+-. . ..+..+.++|++||.+++..
T Consensus 236 ~~~~~~Dvvid~~g-------~--~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 236 KDMPQPRLALNCVG-------G--KSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSSCCCSEEEESSC-------H--HHHHHHHTTSCTTCEEEECC
T ss_pred hCCCCceEEEECCC-------c--HHHHHHHHhhCCCCEEEEEe
Confidence 11124899885422 1 11235779999999998864
No 478
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=58.22 E-value=8.1 Score=33.71 Aligned_cols=101 Identities=14% Similarity=0.027 Sum_probs=57.6
Q ss_pred CCcEEEEec-cccHHH----HHHHHhCCCcEEEEcCCHHH-HHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-----
Q 018970 158 HLVALDCGS-GIGRIT----KNLLIRYFNEVDLLEPVSHF-LDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----- 226 (348)
Q Consensus 158 ~~~VLDvGc-G~G~~~----~~la~~~~~~v~~vD~S~~~-l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----- 226 (348)
+.+||-.|+ |+|.++ ..|++++. .|.+++.++.- ++...+.+ ..++.++.+|+.+...
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~ 75 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL----------PAKAPLLELDVQNEEHLASLA 75 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS----------SSCCCEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhc----------CCCceEEEccCCCHHHHHHHH
Confidence 457899997 244444 44444555 59999877643 34333222 2246778888876430
Q ss_pred C-----CC---ceeEEeechhhh-----------cCChhhHHH-----------HHHHHHHcCCCCcEEEEEe
Q 018970 227 E-----TG---RYDVIWVQWCIG-----------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 ~-----~~---~fD~Ii~~~~l~-----------~~~~~d~~~-----------~l~~~~~~LkpgG~lii~~ 269 (348)
. .+ ..|+++.+-.+. ..+.+++.. +++.+...|+++|.++...
T Consensus 76 ~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 76 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 0 12 789998754432 223333332 3455666666778777654
No 479
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=58.10 E-value=9.6 Score=34.77 Aligned_cols=92 Identities=17% Similarity=0.142 Sum_probs=53.2
Q ss_pred cCCCCCcEEEEec--cccHHHHHHHHhC-CCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC-----
Q 018970 154 RNNQHLVALDCGS--GIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----- 225 (348)
Q Consensus 154 ~~~~~~~VLDvGc--G~G~~~~~la~~~-~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----- 225 (348)
.+.++.+||-.|+ |.|.++..+++.. ...|.+++ ++.-.+.++ ... ..+.. .-.++.
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga-----------~~~~~-~~~~~~~~~~~ 203 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV-----------THLFD-RNADYVQEVKR 203 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS-----------SEEEE-TTSCHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC-----------cEEEc-CCccHHHHHHH
Confidence 3678899999998 3577888887654 34688887 555566554 211 11111 111110
Q ss_pred CCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 226 ~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
...+.+|+|+-+-.- ..+..+.++|++||.+++..
T Consensus 204 ~~~~g~Dvv~d~~g~---------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 204 ISAEGVDIVLDCLCG---------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp HCTTCEEEEEEECC----------------CTTEEEEEEEEEEC
T ss_pred hcCCCceEEEECCCc---------hhHHHHHHHhhcCCEEEEEC
Confidence 112579999864321 12366889999999998764
No 480
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=57.83 E-value=19 Score=31.54 Aligned_cols=104 Identities=16% Similarity=0.098 Sum_probs=65.5
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (348)
+..+|--|++.|. .+..|++.+.. |..+|.+++.++.+.+.+... +.++.++.+|+.+...
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~-Vv~~~~~~~~~~~~~~~i~~~-------g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSI-VVAVELLEDRLNQIVQELRGM-------GKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4567777877663 45556666664 999999999988877766543 3467888899877431
Q ss_pred --CCCceeEEeechh-------hhcCChhhHHH-----------HHHHHHHcCC--CCcEEEEEe
Q 018970 227 --ETGRYDVIWVQWC-------IGHLTDDDFVS-----------FFKRAKVGLK--PGGFFVLKE 269 (348)
Q Consensus 227 --~~~~fD~Ii~~~~-------l~~~~~~d~~~-----------~l~~~~~~Lk--pgG~lii~~ 269 (348)
.-++.|+++.+-. +..++++++.. +.+.+...|+ .+|.++...
T Consensus 79 ~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnis 143 (254)
T 4fn4_A 79 FETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTA 143 (254)
T ss_dssp HHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEe
Confidence 1257899986532 33344444432 2344455443 367777654
No 481
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=57.31 E-value=58 Score=29.00 Aligned_cols=102 Identities=16% Similarity=0.202 Sum_probs=52.4
Q ss_pred cEEEEeccc-cH-HHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 160 VALDCGSGI-GR-ITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 160 ~VLDvGcG~-G~-~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
+|.-+|+|. |. ++..++..+. .+|.++|+++..++.....+.... .......+...|...+ ...|+|+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~----~~~~~~~i~~~~~~a~----~~aDvVIi 73 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAA----PVSHGTRVWHGGHSEL----ADAQVVIL 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSC----CTTSCCEEEEECGGGG----TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhh----hhcCCeEEEECCHHHh----CCCCEEEE
Confidence 578899875 32 3333343443 279999999886654222222210 0012233333343222 34698887
Q ss_pred chhhhcCC----------h-hhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 237 QWCIGHLT----------D-DDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 237 ~~~l~~~~----------~-~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.-....-+ + +-...+++.+.+. .|++++++..|
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tN 117 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSN 117 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSS
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecC
Confidence 54221110 0 1135566777776 69999887543
No 482
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=57.19 E-value=28 Score=30.26 Aligned_cols=100 Identities=11% Similarity=0.066 Sum_probs=55.3
Q ss_pred CCcEEEEecc-ccHH----HHHHHHhCCCcEEEEcCCHH---HHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC---
Q 018970 158 HLVALDCGSG-IGRI----TKNLLIRYFNEVDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--- 226 (348)
Q Consensus 158 ~~~VLDvGcG-~G~~----~~~la~~~~~~v~~vD~S~~---~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--- 226 (348)
+.+||-.|++ +|.+ +..|++++. .|.+++-++. .++...+.. ..+.++.+|+.+...
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~-----------~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQEL-----------NSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHT-----------TCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-----------CCcEEEEcCCCCHHHHHH
Confidence 3578888875 2333 344444455 5999987765 222222221 125677888876420
Q ss_pred -------CCCceeEEeechhhh----------cCChhhHHH-----------HHHHHHHcCCCCcEEEEEe
Q 018970 227 -------ETGRYDVIWVQWCIG----------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 227 -------~~~~fD~Ii~~~~l~----------~~~~~d~~~-----------~l~~~~~~LkpgG~lii~~ 269 (348)
..+..|++|.+-.+. ..+.+++.. +++.+...|+++|.+++..
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 114689998765432 233333332 3455556666678777654
No 483
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=56.44 E-value=26 Score=30.11 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=50.5
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (348)
+.+||-.|++.|. ++..|++++. +|.+++.++..++.+.+.+... ..++.++.+|+.+...
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQF-------PGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCS-------TTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4578877876542 4555566666 4999999999888887776543 3468888899877431
Q ss_pred --CCCceeEEeechh
Q 018970 227 --ETGRYDVIWVQWC 239 (348)
Q Consensus 227 --~~~~fD~Ii~~~~ 239 (348)
..+..|+++.+-.
T Consensus 78 ~~~~g~id~lv~nAg 92 (257)
T 3imf_A 78 DEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 0146899987543
No 484
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=56.01 E-value=20 Score=30.55 Aligned_cols=75 Identities=19% Similarity=0.146 Sum_probs=50.2
Q ss_pred CCcEEEEecccc---HHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------
Q 018970 158 HLVALDCGSGIG---RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G---~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (348)
+.+||-.|++.| .++..|++++.. |.+++.++..++...+.+... ...+.+..+|+.+...
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAA-VVVADINAEAAEAVAKQIVAD-------GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 457888887655 245566666664 999999998887776655332 3457888889877430
Q ss_pred --CCCceeEEeechhh
Q 018970 227 --ETGRYDVIWVQWCI 240 (348)
Q Consensus 227 --~~~~fD~Ii~~~~l 240 (348)
..+..|+++.+-.+
T Consensus 81 ~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 01368999876543
No 485
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=55.86 E-value=39 Score=25.50 Aligned_cols=91 Identities=14% Similarity=-0.034 Sum_probs=46.1
Q ss_pred CcEEEEeccc-cHH-HHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCCcee
Q 018970 159 LVALDCGSGI-GRI-TKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYD 232 (348)
Q Consensus 159 ~~VLDvGcG~-G~~-~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~fD 232 (348)
.+|+-+|+|. |.. +..+...+. +|+++|.++..++.++ .. ...+...|..+.. .....+|
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~----~~---------~~~~~~~d~~~~~~l~~~~~~~~d 72 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYA----SY---------ATHAVIANATEENELLSLGIRNFE 72 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTT----TT---------CSEEEECCTTCHHHHHTTTGGGCS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH----Hh---------CCEEEEeCCCCHHHHHhcCCCCCC
Confidence 4799999854 332 233333354 5999999876654332 11 1234555554321 1124689
Q ss_pred EEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 233 ~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
+|+..-.-. .+....+....+.+.+. .+++.
T Consensus 73 ~vi~~~~~~----~~~~~~~~~~~~~~~~~-~ii~~ 103 (144)
T 2hmt_A 73 YVIVAIGAN----IQASTLTTLLLKELDIP-NIWVK 103 (144)
T ss_dssp EEEECCCSC----HHHHHHHHHHHHHTTCS-EEEEE
T ss_pred EEEECCCCc----hHHHHHHHHHHHHcCCC-eEEEE
Confidence 888643321 01222334444456665 55543
No 486
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=55.68 E-value=15 Score=33.31 Aligned_cols=90 Identities=6% Similarity=-0.047 Sum_probs=52.9
Q ss_pred CcEEEE-ecc-ccHHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC------CCCc
Q 018970 159 LVALDC-GSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------ETGR 230 (348)
Q Consensus 159 ~~VLDv-GcG-~G~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~ 230 (348)
.+||=. |+| .|..+..++.....+|++++.+++-++.+++.-.. .+...+-.++.. ....
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAA------------HVLNEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCS------------EEEETTSTTHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEEECCcHHHHHHHHHHhcCCC
Confidence 355543 443 46666666655333799999999999988764211 111111111110 0125
Q ss_pred eeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEEe
Q 018970 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (348)
Q Consensus 231 fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~~ 269 (348)
+|+|+-+-.- ..+..+.++|++||.+++..
T Consensus 234 ~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 234 PRIFLDAVTG---------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CCEEEESSCH---------HHHHHHHHHSCTTCEEEECC
T ss_pred CcEEEECCCC---------hhHHHHHhhhcCCCEEEEEe
Confidence 8999864331 12366788999999999864
No 487
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=55.38 E-value=29 Score=31.86 Aligned_cols=99 Identities=13% Similarity=-0.002 Sum_probs=54.5
Q ss_pred CcEEEEeccc-cH-HHHHHHHhC-------CCcEEEEcCCHH-----HHHHHHHHhCCCCC-CCcCCCcceeEEEcCCCC
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRY-------FNEVDLLEPVSH-----FLDAARESLAPENH-MAPDMHKATNFFCVPLQD 223 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~-------~~~v~~vD~S~~-----~l~~a~~~~~~~~~-~~~~~~~~i~~~~~d~~~ 223 (348)
.+|.=||+|. |. ++..|+..+ . +|+++|.++. .++..++.-....+ .+.....++.+ ..|..+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~-~~~~~e 99 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFEN-EVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVA-HSDLAS 99 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCS-CEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEE-ESSTHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCC-eEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEE-ECCHHH
Confidence 4799999995 43 455566656 4 5999998877 66655443211000 00000112222 122211
Q ss_pred CCCCCCceeEEeechhhhcCChhhHHHHHHHHHH----cCCCCcEEEE
Q 018970 224 FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKV----GLKPGGFFVL 267 (348)
Q Consensus 224 ~~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~----~LkpgG~lii 267 (348)
. -...|+|+..-. +.....+++.+.. .++|+..++.
T Consensus 100 a---~~~aDvVilav~-----~~~~~~vl~~i~~~~~~~l~~~~ivvs 139 (375)
T 1yj8_A 100 V---INDADLLIFIVP-----CQYLESVLASIKESESIKIASHAKAIS 139 (375)
T ss_dssp H---HTTCSEEEECCC-----HHHHHHHHHHHTC---CCCCTTCEEEE
T ss_pred H---HcCCCEEEEcCC-----HHHHHHHHHHHhhhhhccCCCCCEEEE
Confidence 1 135798887533 2356778888887 8888766554
No 488
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=55.25 E-value=17 Score=31.39 Aligned_cols=75 Identities=11% Similarity=-0.040 Sum_probs=50.8
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC-----C--
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~-- 227 (348)
+.+||-.|++.|. ++..|++++. .|.+++.++..++.+.+.+... +.++.++.+|+.+... .
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAA-------GGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCeEEEEECcCCCHHHHHHHHHHH
Confidence 4578888877652 4555666666 4999999988887776665432 3468888999877431 0
Q ss_pred --CCceeEEeechhh
Q 018970 228 --TGRYDVIWVQWCI 240 (348)
Q Consensus 228 --~~~fD~Ii~~~~l 240 (348)
.+..|+++.+-.+
T Consensus 79 ~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHSCEEEEEECCCC
T ss_pred HhhCCceEEEECCCc
Confidence 0478999875543
No 489
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=55.21 E-value=22 Score=32.22 Aligned_cols=101 Identities=11% Similarity=-0.044 Sum_probs=55.7
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCC------CcEEEEcCCHH-----HHHHHHHHhCCCCCC-CcCCCcceeEEEcCCCCC
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYF------NEVDLLEPVSH-----FLDAARESLAPENHM-APDMHKATNFFCVPLQDF 224 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~------~~v~~vD~S~~-----~l~~a~~~~~~~~~~-~~~~~~~i~~~~~d~~~~ 224 (348)
.+|.=||+|. | .++..|+..+. .+|+++|.++. .++..++......+. ......++.+ ..|..+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 87 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-VPDVVQA 87 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE-ESSHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE-EcCHHHH
Confidence 4799999996 3 34555665550 35999999887 666655432110000 0000111221 1222111
Q ss_pred CCCCCceeEEeechhhhcCChhhHHHHHHHHHHcCCCCcEEEEE
Q 018970 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (348)
Q Consensus 225 ~~~~~~fD~Ii~~~~l~~~~~~d~~~~l~~~~~~LkpgG~lii~ 268 (348)
-...|+|+..-. ......+++.+...++|+..++..
T Consensus 88 ---~~~aD~Vilav~-----~~~~~~v~~~i~~~l~~~~ivv~~ 123 (354)
T 1x0v_A 88 ---AEDADILIFVVP-----HQFIGKICDQLKGHLKANATGISL 123 (354)
T ss_dssp ---HTTCSEEEECCC-----GGGHHHHHHHHTTCSCTTCEEEEC
T ss_pred ---HcCCCEEEEeCC-----HHHHHHHHHHHHhhCCCCCEEEEE
Confidence 135798887543 235678888898888887765543
No 490
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=54.98 E-value=21 Score=34.27 Aligned_cols=93 Identities=15% Similarity=0.119 Sum_probs=55.3
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|.=||+|. | .++..|+..++. |.+.|.+++.++...+.... ..+. ...++.++....+..|+|+.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~~~~---------~gi~-~~~s~~e~v~~l~~aDvVil 74 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYT-VAIYNRTTSKTEEVFKEHQD---------KNLV-FTKTLEEFVGSLEKPRRIML 74 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-EEEECSSHHHHHHHHHHTTT---------SCEE-ECSSHHHHHHTBCSSCEEEE
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHhCcC---------CCeE-EeCCHHHHHhhccCCCEEEE
Confidence 4688999986 3 345666666664 99999999888877665421 0111 11222221100023688886
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~li 266 (348)
.-.-. .....+++.+...|+||-.++
T Consensus 75 avp~~----~~v~~vl~~l~~~l~~g~iiI 100 (474)
T 2iz1_A 75 MVQAG----AATDATIKSLLPLLDIGDILI 100 (474)
T ss_dssp CCCTT----HHHHHHHHHHGGGCCTTCEEE
T ss_pred EccCc----hHHHHHHHHHHhhCCCCCEEE
Confidence 43321 135677888888898876544
No 491
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=54.72 E-value=20 Score=34.58 Aligned_cols=93 Identities=13% Similarity=0.088 Sum_probs=55.7
Q ss_pred CcEEEEeccc-c-HHHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G-~~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|.=||+|. | .++..|++.++. |++.|.+++.++...+.... ..+.. ..++.++...-...|+|++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~G~~-V~v~~r~~~~~~~l~~~~~~---------~gi~~-~~s~~e~v~~l~~aDvVil 84 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESRGYT-VSIFNRSREKTEEVIAENPG---------KKLVP-YYTVKEFVESLETPRRILL 84 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTTTCC-EEEECSSHHHHHHHHHHSTT---------SCEEE-CSSHHHHHHTBCSSCEEEE
T ss_pred CeEEEEccHHHHHHHHHHHHhCCCe-EEEEeCCHHHHHHHHhhCCC---------CCeEE-eCCHHHHHhCCCCCCEEEE
Confidence 5799999986 3 345666666664 99999999888877664321 01111 1122221100013688886
Q ss_pred chhhhcCChhhHHHHHHHHHHcCCCCcEEE
Q 018970 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l~~~~~~LkpgG~li 266 (348)
.-.-. .....+++.+...|+||..++
T Consensus 85 ~Vp~~----~~v~~vl~~l~~~l~~g~iII 110 (480)
T 2zyd_A 85 MVKAG----AGTDAAIDSLKPYLDKGDIII 110 (480)
T ss_dssp CSCSS----SHHHHHHHHHGGGCCTTCEEE
T ss_pred ECCCH----HHHHHHHHHHHhhcCCCCEEE
Confidence 43321 246678888988998876554
No 492
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=54.56 E-value=23 Score=31.06 Aligned_cols=72 Identities=18% Similarity=0.102 Sum_probs=47.5
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC------CCC
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PET 228 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~ 228 (348)
+.+||-.|++.|. ++..|++++. .|.+++.++..++.+.+.+ ..++.++.+|+.+.. ..-
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~d~~~v~~~~~~~ 84 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTM----------AGQVEVRELDLQDLSSVRRFADGV 84 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS----------SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh----------cCCeeEEEcCCCCHHHHHHHHHhc
Confidence 4578877776542 3455555566 5999999988776665443 246888899987743 111
Q ss_pred CceeEEeechhh
Q 018970 229 GRYDVIWVQWCI 240 (348)
Q Consensus 229 ~~fD~Ii~~~~l 240 (348)
+..|+++.+-.+
T Consensus 85 ~~iD~lv~nAg~ 96 (291)
T 3rd5_A 85 SGADVLINNAGI 96 (291)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCcC
Confidence 478999876543
No 493
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=54.27 E-value=73 Score=28.25 Aligned_cols=103 Identities=14% Similarity=0.086 Sum_probs=55.0
Q ss_pred cEEEEeccc-cH-HHHHHHHhCC-CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 160 VALDCGSGI-GR-ITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 160 ~VLDvGcG~-G~-~~~~la~~~~-~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
+|.=||+|. |. ++..|+..+. .+|+++|.+++.++.....+.... ......+.+...|.+.+ ...|+|+.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~d~~~~----~~aDvVii 75 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM---ANLEAHGNIVINDWAAL----ADADVVIS 75 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG---GGSSSCCEEEESCGGGG----TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhh---hhcCCCeEEEeCCHHHh----CCCCEEEE
Confidence 688899886 32 4445555553 479999999887765543221000 00011233333444222 35799887
Q ss_pred chhhhcC----Ch-----------hhHHHHHHHHHHcCCCCcEEEEEec
Q 018970 237 QWCIGHL----TD-----------DDFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 237 ~~~l~~~----~~-----------~d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
.-..... +. +-...+++.+... .|++++++..|
T Consensus 76 av~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~~~~~ii~~tN 123 (309)
T 1hyh_A 76 TLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVVISN 123 (309)
T ss_dssp CCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred ecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEcC
Confidence 5443221 10 0134666667665 47888877543
No 494
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=54.23 E-value=37 Score=29.74 Aligned_cols=75 Identities=17% Similarity=0.134 Sum_probs=50.7
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (348)
+.+||-.|++.|. ++..|++.+. .|.+++.++..++.+.+.+... ...+.+..+|+.+...
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGA-------GGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4578888876552 4455565666 5999999998888777766543 3467888889877420
Q ss_pred --CCCceeEEeechhh
Q 018970 227 --ETGRYDVIWVQWCI 240 (348)
Q Consensus 227 --~~~~fD~Ii~~~~l 240 (348)
..+..|+++.+-.+
T Consensus 100 ~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 01468999875543
No 495
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=53.88 E-value=27 Score=30.19 Aligned_cols=73 Identities=14% Similarity=0.098 Sum_probs=50.4
Q ss_pred CCcEEEEeccccH---HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCC--------
Q 018970 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-------- 226 (348)
Q Consensus 158 ~~~VLDvGcG~G~---~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------- 226 (348)
+.++|-.|++.|. ++..|++++.. |.+++.++..++.+.+.+... ..++.++.+|+.+...
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGAD-LVLAARTVERLEDVAKQVTDT-------GRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCE-EEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4578888887653 45666666764 999999988887776655432 3467888889887431
Q ss_pred --CCCceeEEeech
Q 018970 227 --ETGRYDVIWVQW 238 (348)
Q Consensus 227 --~~~~fD~Ii~~~ 238 (348)
..+..|+++.+-
T Consensus 83 ~~~~g~id~lv~nA 96 (264)
T 3ucx_A 83 MKAYGRVDVVINNA 96 (264)
T ss_dssp HHHTSCCSEEEECC
T ss_pred HHHcCCCcEEEECC
Confidence 124789998754
No 496
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=53.75 E-value=13 Score=32.73 Aligned_cols=112 Identities=12% Similarity=0.032 Sum_probs=63.4
Q ss_pred CcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|.=||+|. |. ++..|+..+. +|++.|.++..++.+.+. + +.+ ..+..+.. ...|+|+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~----g---------~~~-~~~~~~~~---~~aDvvi~ 63 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAAL----G---------AER-AATPCEVV---ESCPVTFA 63 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHT----T---------CEE-CSSHHHHH---HHCSEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHC----C---------Cee-cCCHHHHH---hcCCEEEE
Confidence 4688899986 33 4555555565 599999999887766543 0 111 11221111 24688876
Q ss_pred chhhhcCChhhHHHHH---HHHHHcCCCCcEEEEEecccCCCceecCCCCceecCHHHHHHHHHhcCCeEEE
Q 018970 237 QWCIGHLTDDDFVSFF---KRAKVGLKPGGFFVLKENIARSGFVLDKEDRSITRSDFYFKELFSRCGLHIYK 305 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l---~~~~~~LkpgG~lii~~~~~~~~~~~d~~~~~~~~s~~~l~~l~~~aGf~~v~ 305 (348)
+-.- +.....++ +.+...|++|..++...... .-+...+.+.+++.|...+.
T Consensus 64 ~vp~----~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~-------------~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 64 MLAD----PAAAEEVCFGKHGVLEGIGEGRGYVDMSTVD-------------PATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp CCSS----HHHHHHHHHSTTCHHHHCCTTCEEEECSCCC-------------HHHHHHHHHHHHHTTCEEEE
T ss_pred EcCC----HHHHHHHHcCcchHhhcCCCCCEEEeCCCCC-------------HHHHHHHHHHHHHhCCEEEE
Confidence 4321 12455666 77778888877654331110 01234456667777776554
No 497
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=53.34 E-value=19 Score=34.54 Aligned_cols=65 Identities=9% Similarity=0.108 Sum_probs=44.2
Q ss_pred CCcEEEEeccccHHHHHHHHhCC---CcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCC----CCCCc
Q 018970 158 HLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (348)
Q Consensus 158 ~~~VLDvGcG~G~~~~~la~~~~---~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~ 230 (348)
.++|+=+|||. ++..+++... ..|+.+|.+++.++.+.+.+. +....+|..+.. ..-..
T Consensus 3 ~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~------------~~~i~Gd~~~~~~L~~Agi~~ 68 (461)
T 4g65_A 3 AMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKYD------------LRVVNGHASHPDVLHEAGAQD 68 (461)
T ss_dssp CEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS------------CEEEESCTTCHHHHHHHTTTT
T ss_pred cCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC------------cEEEEEcCCCHHHHHhcCCCc
Confidence 46788888864 5555554432 269999999999998877652 556778877643 11246
Q ss_pred eeEEee
Q 018970 231 YDVIWV 236 (348)
Q Consensus 231 fD~Ii~ 236 (348)
.|++++
T Consensus 69 ad~~ia 74 (461)
T 4g65_A 69 ADMLVA 74 (461)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 888875
No 498
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=53.13 E-value=61 Score=28.72 Aligned_cols=103 Identities=11% Similarity=0.018 Sum_probs=53.1
Q ss_pred CCcEEEEeccc-cH-HHHHHHHhCC-CcEEEEcCCHHHHHH-HHHHhCCCCCCCcCCCcceeEEEc-CCCCCCCCCCcee
Q 018970 158 HLVALDCGSGI-GR-ITKNLLIRYF-NEVDLLEPVSHFLDA-ARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYD 232 (348)
Q Consensus 158 ~~~VLDvGcG~-G~-~~~~la~~~~-~~v~~vD~S~~~l~~-a~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~fD 232 (348)
..+|.-||+|. |. ++..|+..+. .+|+++|.++..++. +.+......+ .....+... +...+ ...|
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~----~~aD 77 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSF-----YPTVSIDGSDDPEIC----RDAD 77 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGG-----STTCEEEEESCGGGG----TTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhh-----cCCeEEEeCCCHHHh----CCCC
Confidence 46899999986 33 3344444443 269999999876652 2211111000 011222222 32221 3579
Q ss_pred EEeechhhhcCCh---h--------hHHHHHHHHHHcCCCCcEEEEEec
Q 018970 233 VIWVQWCIGHLTD---D--------DFVSFFKRAKVGLKPGGFFVLKEN 270 (348)
Q Consensus 233 ~Ii~~~~l~~~~~---~--------d~~~~l~~~~~~LkpgG~lii~~~ 270 (348)
+|+..--....+. . -...+++.+... .|++++++..+
T Consensus 78 ~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~N 125 (319)
T 1lld_A 78 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITN 125 (319)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecC
Confidence 9987543222220 0 122566667664 78888877543
No 499
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=52.82 E-value=39 Score=29.79 Aligned_cols=72 Identities=14% Similarity=0.017 Sum_probs=43.3
Q ss_pred CCCcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEE
Q 018970 157 QHLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (348)
Q Consensus 157 ~~~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~I 234 (348)
.+.++|-+|+|- |. .+..|+..+..+|+.++-+++-.+...+.+.. ..+. ..+++++.. ..+|+|
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~---------~~~~--~~~~~~l~~--~~~Div 185 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH---------SRLR--ISRYEALEG--QSFDIV 185 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC---------TTEE--EECSGGGTT--CCCSEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc---------CCee--EeeHHHhcc--cCCCEE
Confidence 467899999872 22 23445555666799999988766655555432 0122 233333332 569999
Q ss_pred eechhhh
Q 018970 235 WVQWCIG 241 (348)
Q Consensus 235 i~~~~l~ 241 (348)
|..-...
T Consensus 186 InaTp~g 192 (272)
T 3pwz_A 186 VNATSAS 192 (272)
T ss_dssp EECSSGG
T ss_pred EECCCCC
Confidence 9765544
No 500
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=52.75 E-value=13 Score=32.92 Aligned_cols=87 Identities=17% Similarity=0.190 Sum_probs=50.8
Q ss_pred CcEEEEeccc-cH-HHHHHHHhCCCcEEEEcCCHHHHHHHHHHhCCCCCCCcCCCcceeEEEcCCCCCCCCCCceeEEee
Q 018970 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (348)
Q Consensus 159 ~~VLDvGcG~-G~-~~~~la~~~~~~v~~vD~S~~~l~~a~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~Ii~ 236 (348)
.+|.=||||. |. ++..++..+. +|.++|.++..++.+.+. + +.. ..+..+.. ...|+|+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~----g---------~~~-~~~~~~~~---~~~D~vi~ 67 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAA----G---------AET-ASTAKAIA---EQCDVIIT 67 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----T---------CEE-CSSHHHHH---HHCSEEEE
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC----C---------Cee-cCCHHHHH---hCCCEEEE
Confidence 4799999986 43 3455555555 599999999887766543 1 111 11211110 24688886
Q ss_pred chhhhcCChhhHHHHH---HHHHHcCCCCcEEEE
Q 018970 237 QWCIGHLTDDDFVSFF---KRAKVGLKPGGFFVL 267 (348)
Q Consensus 237 ~~~l~~~~~~d~~~~l---~~~~~~LkpgG~lii 267 (348)
.-.-. .+...++ +.+...++||..++.
T Consensus 68 ~v~~~----~~~~~~~~~~~~l~~~l~~~~~vv~ 97 (299)
T 1vpd_A 68 MLPNS----PHVKEVALGENGIIEGAKPGTVLID 97 (299)
T ss_dssp CCSSH----HHHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred ECCCH----HHHHHHHhCcchHhhcCCCCCEEEE
Confidence 54311 1344566 567778888876543
Done!