Your job contains 1 sequence.
>018975
MAEEEVAMELEAVQAVYGDECVVLDSYPPHLHLRIKPRTADVSSQQFVEAVIGIRASPKY
PEHPPRIDLIESKGLDDQRQKHLISCIQDKAHELTSCLMLVALCEEAVAKLSAMNHPDGD
CPLCLYPLFRKDKNVEVLPFMKLMSCFHCFHSECIVRWWNWLQNGIETDSCATVHPNTDM
RNQKDMLGPIDGNMGTCPVCRKVFHVKDLEHVLNLVGSQSSHLSSNGNEVDDDDKYLHSD
SENIRRQKFEAILKLQEENSGLIEPKRDLVVLPGMFLPQPATLPTPTSTKETTEQEQGEQ
SAPAEINATGSSNRASGSKHWNSGMRKRRGRNLRNQRQWIRKDDSSVN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018975
(348 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0033884 - symbol:CG13344 species:7227 "Drosophila ... 185 3.4e-12 1
ZFIN|ZDB-GENE-040426-1581 - symbol:rnf25 "ring finger pro... 176 7.5e-12 2
UNIPROTKB|F1P4G1 - symbol:RNF25 "Uncharacterized protein"... 169 5.0e-11 2
MGI|MGI:1890215 - symbol:Rnf25 "ring finger protein 25" s... 171 2.6e-10 1
RGD|1311557 - symbol:Rnf25 "ring finger protein 25" speci... 166 9.7e-10 1
UNIPROTKB|E2RE32 - symbol:RNF25 "Uncharacterized protein"... 165 1.3e-09 1
UNIPROTKB|F1MWS4 - symbol:RNF25 "E3 ubiquitin-protein lig... 164 1.7e-09 1
UNIPROTKB|Q5E9N3 - symbol:RNF25 "E3 ubiquitin-protein lig... 156 1.4e-08 1
UNIPROTKB|Q96BH1 - symbol:RNF25 "E3 ubiquitin-protein lig... 156 1.4e-08 1
UNIPROTKB|I3LCK8 - symbol:LOC100739271 "Uncharacterized p... 150 7.3e-08 1
TAIR|locus:2195498 - symbol:AT1G63840 species:3702 "Arabi... 87 0.00070 2
>FB|FBgn0033884 [details] [associations]
symbol:CG13344 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR006575 Pfam:PF05773 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50908 SMART:SM00184 SMART:SM00591 EMBL:AE013599
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
eggNOG:NOG243985 KO:K10640 GeneTree:ENSGT00390000001557
RefSeq:NP_610915.2 ProteinModelPortal:A1Z9I6 SMR:A1Z9I6
IntAct:A1Z9I6 PaxDb:A1Z9I6 PRIDE:A1Z9I6 EnsemblMetazoa:FBtr0087586
GeneID:36541 KEGG:dme:Dmel_CG13344 UCSC:CG13344-RA
FlyBase:FBgn0033884 InParanoid:A1Z9I6 OMA:NLPSGQC OrthoDB:EOG4B2RD1
PhylomeDB:A1Z9I6 ChiTaRS:CG13344 GenomeRNAi:36541 NextBio:799093
Bgee:A1Z9I6 Uniprot:A1Z9I6
Length = 374
Score = 185 (70.2 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 66/239 (27%), Positives = 100/239 (41%)
Query: 35 IKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESKGLDDQRQKHLISCIQDKAHEL 94
+ P T + QQ+V + + +P YPE P L+ +GLDD R + + S K E
Sbjct: 36 VLPLTGEEEEQQYVCVTLQVHPTPGYPEESPTFKLLRPRGLDDARLEAIRSACNAKIKES 95
Query: 95 TSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKDKNVEVLPFMKLMSCFHCFHSEC 154
++ L E LS N P G C +CLY D+ F + CFH HS C
Sbjct: 96 IGFPVVFDLIEVVREHLSGSNLPSGQCVVCLYGFADGDE------FTRT-ECFHYLHSYC 148
Query: 155 IVRWWNWLQNGIETDSCATVHPNTDMRNQKDMLGPIDGNMGTCPVCRKVFHVKDLEHVLN 214
+ R N L+ + + QK D CPVCR+ H+ D L
Sbjct: 149 LARHLNALRRNYQEE-----FDKLPAWLQKTA----DPFQALCPVCRE--HIGDETDSLK 197
Query: 215 LVGSQSSHLSSNGNEVDDDDKYLHSD-SENIRRQKFE-AILKLQEENSGLI--EPKRDL 269
S L++ +V ++ + + SE +QK AI+ + E S +I E + D+
Sbjct: 198 CAMPPSELLNAPEFKVTEELRQMQQRMSELYLQQKSRGAIIDVNAEGSAVISIETEEDI 256
>ZFIN|ZDB-GENE-040426-1581 [details] [associations]
symbol:rnf25 "ring finger protein 25" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR006575 Pfam:PF05773 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50908 SMART:SM00184 SMART:SM00591
ZFIN:ZDB-GENE-040426-1581 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 CTD:64320 KO:K10640
EMBL:BC055571 IPI:IPI00832365 RefSeq:NP_957477.1 UniGene:Dr.83619
ProteinModelPortal:Q7SXJ6 GeneID:100003846 KEGG:dre:100003846
HOVERGEN:HBG105028 InParanoid:Q7SXJ6 NextBio:20786004
ArrayExpress:Q7SXJ6 Uniprot:Q7SXJ6
Length = 513
Score = 176 (67.0 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 54/182 (29%), Positives = 82/182 (45%)
Query: 33 LRIKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESKGLDDQRQKHLISCIQDKAH 92
L + P TA+ QFV + + +YP P I + +GL D + L +Q +A
Sbjct: 36 LVLHPSTAEDCLSQFVRLTLTMDLDSQYPYSSPYISIHNPRGLSDDKLLSLQKSLQMEAE 95
Query: 93 ELTSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKDKNVEVLPFMKLMSCFHCFHS 152
E +L L E A L+ N P G+C +CLY K EV F K SC+H FHS
Sbjct: 96 ECVGTPVLYQLIERAKEILTDSNIPHGNCVICLYDF----KEGEV--FTKT-SCYHYFHS 148
Query: 153 ECIVRWWNWLQNGIETDSCATVHPNTDMRNQKDMLGPIDGNMGTCPVCRKVFHVKDLEHV 212
C+ R+ + ++ T R +++ L + CPVCR+ DL+ +
Sbjct: 149 HCLGRYITHSEMELKDRERELEEDKTRDRTEEEELAVV------CPVCRESL-TYDLDAL 201
Query: 213 LN 214
L+
Sbjct: 202 LS 203
Score = 48 (22.0 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 197 CPVCRKVFHVKDLEHVLNLVGSQSSHLSSNGNEVDDDDKYLHSDSENIRRQKFEAILKLQ 256
CPVCR+ DL+ +L+ S + L +D + + + + + + IL+ Q
Sbjct: 187 CPVCRESL-TYDLDALLS---SPAPVLCQQ------EDAVIGGEFKK-KWEALQKILERQ 235
Query: 257 EENSGLIEPKRD 268
+E G+I+P+ +
Sbjct: 236 KEKGGVIDPEAE 247
>UNIPROTKB|F1P4G1 [details] [associations]
symbol:RNF25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0051059 "NF-kappaB binding" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR006575 Pfam:PF05773
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184
SMART:SM00591 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
GeneTree:ENSGT00390000001557 EMBL:AADN02016784 IPI:IPI00821720
Ensembl:ENSGALT00000018556 OMA:RWERSRV ArrayExpress:F1P4G1
Uniprot:F1P4G1
Length = 469
Score = 169 (64.5 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 50/185 (27%), Positives = 81/185 (43%)
Query: 26 SYPPHLHLRIKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESKGLDDQRQKHLIS 85
S P + + + P TA QFV + + P+YP P I + +GL D++ + ++
Sbjct: 43 SEPWEVSITLHPATAQDQDSQFVRCTLVLAVPPQYPIEAPDISISNPRGLSDEQIQKMLQ 102
Query: 86 CIQDKAHELTSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKDKNVEVLPFMKLMS 145
+++ A +L L E+ L+ N P G C +CLY ++ F K
Sbjct: 103 TLRNVAEARLGTEVLYELIEKGKEILTDNNIPHGQCVICLYGFQEREA------FTKTQ- 155
Query: 146 CFHCFHSECIVRWWNWLQNGIETDSCATVHPNTDMRNQKDMLGPIDGNMGT-CPVCRKVF 204
C+H FHS C+ R+ +++ I + R Q P +G CPVCR+
Sbjct: 156 CYHYFHSHCLARYAQHMEDEILMQQ--------EEREQHLAPSPKQ-KVGVQCPVCRETL 206
Query: 205 HVKDL 209
V DL
Sbjct: 207 -VYDL 210
Score = 47 (21.6 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 240 DSENIRRQK-FEAILKLQEENSGLIEPKRD 268
D++ ++ Q+ I K Q+E G+I+P+ +
Sbjct: 229 DAKMLQHQEELRLIFKKQQEKGGIIDPEAE 258
>MGI|MGI:1890215 [details] [associations]
symbol:Rnf25 "ring finger protein 25" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051059 "NF-kappaB binding" evidence=ISO]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=ISO] InterPro:IPR001841 InterPro:IPR006575
Pfam:PF05773 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50908
SMART:SM00184 SMART:SM00591 UniPathway:UPA00143 MGI:MGI:1890215
Prosite:PS00518 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
GO:GO:0051059 CTD:64320 eggNOG:NOG243985 HOGENOM:HOG000012992
HOVERGEN:HBG055249 KO:K10640 OrthoDB:EOG4PVNZP OMA:EDWVLPS
EMBL:AF171060 EMBL:AK002399 EMBL:AK171752 EMBL:BC022715
EMBL:BC048821 IPI:IPI00317273 RefSeq:NP_067288.2 UniGene:Mm.280920
ProteinModelPortal:Q9QZR0 SMR:Q9QZR0 STRING:Q9QZR0
PhosphoSite:Q9QZR0 PaxDb:Q9QZR0 PRIDE:Q9QZR0
Ensembl:ENSMUST00000027357 GeneID:57751 KEGG:mmu:57751
UCSC:uc007bms.2 GeneTree:ENSGT00390000001557 InParanoid:Q9QZR0
NextBio:313900 Bgee:Q9QZR0 CleanEx:MM_RNF25 Genevestigator:Q9QZR0
GermOnline:ENSMUSG00000026171 Uniprot:Q9QZR0
Length = 456
Score = 171 (65.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 59/197 (29%), Positives = 86/197 (43%)
Query: 17 YGDECVVLDSY---PPHLHLRIKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESK 73
Y DE V+ P + + + P TA+V QFV + +R +YP P+I + +
Sbjct: 27 YLDELQVMKGNGRSPWEIFITLHPATAEVQDSQFVCFTLVLRIPVQYPHEVPQISIRNPR 86
Query: 74 GLDDQRQKHLIS-CIQDKAHELTSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKD 132
GL D+ Q H IS + A E ML L E+ L+ N P G C +CLY K+
Sbjct: 87 GLSDE-QIHKISQALGHVAKEGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKE 145
Query: 133 KNVEVLPFMKLMSCFHCFHSECIVRWWNWLQNGIETDSCATVHPNTDMRNQKDMLGPIDG 192
F K C+H FH C+ R+ ++ + T + + QK +G
Sbjct: 146 A------FTKT-PCYHYFHCHCLARYIQHMEQELTTQEQEQERQHV-VTKQK-AVGV--- 193
Query: 193 NMGTCPVCRKVFHVKDL 209
CPVCR+ V DL
Sbjct: 194 ---QCPVCREPL-VYDL 206
>RGD|1311557 [details] [associations]
symbol:Rnf25 "ring finger protein 25" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0051059 "NF-kappaB binding" evidence=IEA;ISO]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA;ISO] InterPro:IPR001841 InterPro:IPR006575
Pfam:PF05773 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50908
SMART:SM00184 SMART:SM00591 RGD:1311557 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 EMBL:CH474004 CTD:64320
KO:K10640 OrthoDB:EOG4PVNZP OMA:EDWVLPS
GeneTree:ENSGT00390000001557 IPI:IPI00358060 RefSeq:NP_001012004.2
UniGene:Rn.101888 Ensembl:ENSRNOT00000022677 GeneID:301515
KEGG:rno:301515 UCSC:RGD:1311557 NextBio:648877 Uniprot:D3ZQ26
Length = 454
Score = 166 (63.5 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 49/169 (28%), Positives = 74/169 (43%)
Query: 17 YGDECVVLDSY---PPHLHLRIKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESK 73
Y DE V+ P + + + P TA+V QFV + ++ +YP P+I + +
Sbjct: 27 YLDELQVMKGNGRSPWEIFITLHPATAEVQDSQFVCFTLVLQVPVQYPHEVPQISIRNPR 86
Query: 74 GLDDQRQKHLIS-CIQDKAHELTSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKD 132
GL D+ Q H IS + A E ML L E+ L+ N P G C +CLY K+
Sbjct: 87 GLSDE-QIHKISQALGHVAKEGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKE 145
Query: 133 KNVEVLPFMKLMSCFHCFHSECIVRWWNWLQNGIETDSCATVHPNTDMR 181
F K C+H FH C+ R+ ++ + T H T +
Sbjct: 146 A------FTKT-PCYHYFHCHCLARYIQHMEQELNTQEQEQQHVVTKQK 187
>UNIPROTKB|E2RE32 [details] [associations]
symbol:RNF25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0051059 "NF-kappaB binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR006575
Pfam:PF05773 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50908
SMART:SM00184 SMART:SM00591 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 CTD:64320 KO:K10640 OMA:EDWVLPS
GeneTree:ENSGT00390000001557 EMBL:AAEX03018156 RefSeq:XP_536071.2
ProteinModelPortal:E2RE32 Ensembl:ENSCAFT00000023635 GeneID:478912
KEGG:cfa:478912 NextBio:20854181 Uniprot:E2RE32
Length = 459
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/185 (26%), Positives = 81/185 (43%)
Query: 26 SYPPHLHLRIKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESKGLDDQRQKHLIS 85
S P +++ + P TA+ + Q+V + ++ +YP P+I + +GL D+ Q H IS
Sbjct: 40 SSPWEIYITLHPATAEDQNSQYVCFTLVLQVPTQYPNEVPQISIRNPRGLSDE-QIHKIS 98
Query: 86 -CIQDKAHELTSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKDKNVEVLPFMKLM 144
+ A+ ML L E+ L+ N P G C +CLY K+ F K
Sbjct: 99 QALSHVANAGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYDFQEKEA------FTKT- 151
Query: 145 SCFHCFHSECIVRWWNWLQNGIETDSCATVHPNTDMRNQKDMLGPIDGNMGTCPVCRKVF 204
C+H FH C+ R+ ++ ++ ++ +G CPVCR+
Sbjct: 152 PCYHYFHCHCLARYIQHMERELQAQGQEQEQERQHAATKQKAVGV------QCPVCREPL 205
Query: 205 HVKDL 209
V DL
Sbjct: 206 -VYDL 209
>UNIPROTKB|F1MWS4 [details] [associations]
symbol:RNF25 "E3 ubiquitin-protein ligase RNF25"
species:9913 "Bos taurus" [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0051059
"NF-kappaB binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR006575
Pfam:PF05773 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50908
SMART:SM00184 SMART:SM00591 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 IPI:IPI00705751 UniGene:Bt.45858
OMA:EDWVLPS GeneTree:ENSGT00390000001557 EMBL:DAAA02005932
Ensembl:ENSBTAT00000004972 Uniprot:F1MWS4
Length = 458
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 49/185 (26%), Positives = 80/185 (43%)
Query: 26 SYPPHLHLRIKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESKGLDDQRQKHLIS 85
S P +++ + P TA+ Q+V + ++ +YP P+I + +GL D+ Q H IS
Sbjct: 40 SSPWEIYITLHPATAEDQDSQYVCFTLVLQVPTQYPHEVPQISIRNPRGLSDE-QIHKIS 98
Query: 86 -CIQDKAHELTSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKDKNVEVLPFMKLM 144
+ A ML L E+ L+ N P G C +CLY K+ F K
Sbjct: 99 QALSHVAEAGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEA------FTKT- 151
Query: 145 SCFHCFHSECIVRWWNWLQNGIETDSCATVHPNTDMRNQKDMLGPIDGNMGTCPVCRKVF 204
C+H FH C+ R+ +++ ++ + ++ P CPVCR+
Sbjct: 152 PCYHYFHCHCLARYIQHMEHELQAQG-------REREQERQHAAPEQAVGVQCPVCREPL 204
Query: 205 HVKDL 209
V DL
Sbjct: 205 -VYDL 208
>UNIPROTKB|Q5E9N3 [details] [associations]
symbol:RNF25 "E3 ubiquitin-protein ligase RNF25"
species:9913 "Bos taurus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0051059 "NF-kappaB binding"
evidence=ISS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR006575
Pfam:PF05773 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50908
SMART:SM00184 SMART:SM00591 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0051059
EMBL:BT020887 IPI:IPI00705751 RefSeq:NP_001015575.1
UniGene:Bt.45858 ProteinModelPortal:Q5E9N3 SMR:Q5E9N3 PRIDE:Q5E9N3
GeneID:511571 KEGG:bta:511571 CTD:64320 eggNOG:NOG243985
HOGENOM:HOG000012992 HOVERGEN:HBG055249 InParanoid:Q5E9N3 KO:K10640
OrthoDB:EOG4PVNZP NextBio:20869993 Uniprot:Q5E9N3
Length = 458
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 48/185 (25%), Positives = 79/185 (42%)
Query: 26 SYPPHLHLRIKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESKGLDDQRQKHLIS 85
S P +++ + P TA+ Q+V + ++ +YP P+I + +GL D+ Q H IS
Sbjct: 40 SSPWEIYITLHPATAEDQDSQYVCFTLVLQVPTQYPHEVPQISIRNPRGLSDE-QIHKIS 98
Query: 86 -CIQDKAHELTSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKDKNVEVLPFMKLM 144
+ A ML L E+ L+ N P G C +CLY K+ F K
Sbjct: 99 QALSHVAEAGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEA------FTKT- 151
Query: 145 SCFHCFHSECIVRWWNWLQNGIETDSCATVHPNTDMRNQKDMLGPIDGNMGTCPVCRKVF 204
C+H F C+ R+ +++ ++ + ++ P CPVCR+
Sbjct: 152 PCYHYFRCHCLARYIQHMEHELQAQG-------REREQERQHAAPEQAVGVQCPVCREPL 204
Query: 205 HVKDL 209
V DL
Sbjct: 205 -VYDL 208
>UNIPROTKB|Q96BH1 [details] [associations]
symbol:RNF25 "E3 ubiquitin-protein ligase RNF25"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IDA] [GO:0051059 "NF-kappaB
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001841 InterPro:IPR006575
Pfam:PF05773 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50908
SMART:SM00184 SMART:SM00591 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_6900 GO:GO:0046872
EMBL:CH471063 GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 CTD:64320 eggNOG:NOG243985
HOGENOM:HOG000012992 HOVERGEN:HBG055249 KO:K10640 OrthoDB:EOG4PVNZP
EMBL:AK023968 EMBL:AK289501 EMBL:AK222525 EMBL:AC009974
EMBL:BC015612 IPI:IPI00059944 RefSeq:NP_071898.2 UniGene:Hs.471403
PDB:2DAY PDB:2DMF PDBsum:2DAY PDBsum:2DMF ProteinModelPortal:Q96BH1
SMR:Q96BH1 DIP:DIP-29063N IntAct:Q96BH1 STRING:Q96BH1
PhosphoSite:Q96BH1 DMDM:21362899 PRIDE:Q96BH1 DNASU:64320
Ensembl:ENST00000295704 GeneID:64320 KEGG:hsa:64320 UCSC:uc002vit.3
GeneCards:GC02M219528 HGNC:HGNC:14662 HPA:HPA036421
neXtProt:NX_Q96BH1 PharmGKB:PA34429 InParanoid:Q96BH1 OMA:EDWVLPS
PhylomeDB:Q96BH1 EvolutionaryTrace:Q96BH1 GenomeRNAi:64320
NextBio:66233 Bgee:Q96BH1 CleanEx:HS_RNF25 Genevestigator:Q96BH1
GermOnline:ENSG00000163481 Uniprot:Q96BH1
Length = 459
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/182 (24%), Positives = 77/182 (42%)
Query: 28 PPHLHLRIKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESKGLDDQRQKHLISCI 87
P +++ + P TA+ Q+V + ++ +YP P+I + +GL D++ ++ +
Sbjct: 42 PWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVL 101
Query: 88 QDKAHELTSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKDKNVEVLPFMKLMSCF 147
A ML L E+ L+ N P G C +CLY K+ F K C+
Sbjct: 102 GHVAKAGLGTAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEA------FTKT-PCY 154
Query: 148 HCFHSECIVRWWNWLQNGIETDSCATVHPNTDMRNQKDMLGPIDGNMGTCPVCRKVFHVK 207
H FH C+ R+ ++ ++ ++ +G CPVCR+ V
Sbjct: 155 HYFHCHCLARYIQHMEQELKAQGQEQEQERQHATTKQKAVGV------QCPVCREPL-VY 207
Query: 208 DL 209
DL
Sbjct: 208 DL 209
>UNIPROTKB|I3LCK8 [details] [associations]
symbol:LOC100739271 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR006575 Pfam:PF05773 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS50908 SMART:SM00184 SMART:SM00591
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 OMA:EDWVLPS
GeneTree:ENSGT00390000001557 Ensembl:ENSSSCT00000028058
Uniprot:I3LCK8
Length = 470
Score = 150 (57.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 50/186 (26%), Positives = 79/186 (42%)
Query: 26 SYPPHLHLRIKPRTADVSSQQFVEAVIGIRASPKYPEHPPRIDLIESKGLDDQRQKHLIS 85
S P + + + P TA+ Q+V + ++ YP P+I + +GL D+ Q H IS
Sbjct: 40 SSPWEISITLHPATAEDQDSQYVCFTLVLQV---YPHEVPQISIRNPRGLSDE-QIHKIS 95
Query: 86 -CIQDKAHELTSCLMLVALCEEAVAKLSAMNHPDGDCPLCLYPLFRKDKNVEVLPFMKLM 144
+ A ML L E+ L+ N P G C +CLY K+ F K
Sbjct: 96 QALSHVAEAGLGAAMLYELIEKGKEILTDNNIPHGQCVICLYGFQEKEA------FTKT- 148
Query: 145 SCFHCFHSECIVRWWNWLQNGIETDSCATVHPNTDMRNQKDMLGPIDGNMGT-CPVCRKV 203
C+H FH C+ R+ +++ ++ + Q+ +G CPVCR+
Sbjct: 149 PCYHYFHCHCLARYIQHMEHELQAQG-------REQEQQRQHAAAKQKAVGVQCPVCREP 201
Query: 204 FHVKDL 209
V DL
Sbjct: 202 L-VYDL 206
>TAIR|locus:2195498 [details] [associations]
symbol:AT1G63840 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0007165
"signal transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684 GO:GO:0009737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC010852 HOGENOM:HOG000239353 EMBL:AY058131
EMBL:BT010153 EMBL:AK227440 IPI:IPI00532654 PIR:E96663
RefSeq:NP_176569.1 UniGene:At.21224 UniGene:At.67559
ProteinModelPortal:Q9CAJ8 SMR:Q9CAJ8 EnsemblPlants:AT1G63840.1
GeneID:842687 KEGG:ath:AT1G63840 TAIR:At1g63840 InParanoid:Q9CAJ8
OMA:CCAVCLY PhylomeDB:Q9CAJ8 ProtClustDB:CLSN2682608
Genevestigator:Q9CAJ8 Uniprot:Q9CAJ8
Length = 166
Score = 87 (35.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 108 VAKLSAMNHPDGDC-PLCLYPLFRKDKNVEVLPFMKLMSCFHCFHSECIVRW 158
V + S +N P+ +C +CLY F D + +L +C H FH C+ RW
Sbjct: 75 VVRFSDINRPESECCAVCLYD-FENDDEIR-----RLTNCRHIFHRGCLDRW 120
Score = 54 (24.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 193 NMGTCPVCRKVFHVKDLEHVLNL-VGSQSSHLSS 225
N TCP+CR F L+ N + SQSS +SS
Sbjct: 125 NQMTCPLCRTQFIPDHLQLEFNQRLWSQSSAVSS 158
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 348 301 0.00096 115 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 617 (66 KB)
Total size of DFA: 248 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.51u 0.09s 27.60t Elapsed: 00:00:03
Total cpu time: 27.51u 0.09s 27.60t Elapsed: 00:00:03
Start: Fri May 10 13:43:10 2013 End: Fri May 10 13:43:13 2013