Your job contains 1 sequence.
>018980
MLIYRGLSRISRISKKTSFGRRWLPSHPLLSGASHSAAAAAADSSVKVLGCREAYSWSLP
ALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEY
FFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVA
SLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVTLLATVV
EHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDY
GKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHVIYLSLLFIASEIL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018980
(348 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 1031 4.1e-104 1
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 407 5.3e-47 2
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 485 3.0e-46 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 478 1.6e-45 1
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 468 1.9e-44 1
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 467 2.4e-44 1
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 459 1.7e-43 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 454 5.7e-43 1
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 453 7.3e-43 1
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 207 9.9e-40 3
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 213 1.3e-39 3
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 417 4.8e-39 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 416 6.1e-39 1
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 410 2.6e-38 1
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 405 8.9e-38 1
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 395 1.0e-36 1
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 390 3.5e-36 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 282 1.3e-30 2
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 265 4.7e-29 2
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 290 4.1e-28 2
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 279 1.1e-27 2
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 282 1.4e-27 2
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 247 2.8e-27 2
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 267 3.6e-27 2
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 267 3.6e-27 2
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 268 4.5e-27 2
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 268 9.4e-27 2
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 268 9.4e-27 2
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 263 1.2e-26 2
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 243 1.2e-26 2
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 252 6.4e-26 2
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 252 6.4e-26 2
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 263 8.2e-26 2
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 253 2.7e-25 2
GENEDB_PFALCIPARUM|PFB0130w - symbol:PFB0130w "polyprenyl... 263 5.4e-25 2
UNIPROTKB|O96130 - symbol:OPP "Octaprenyl pyrophosphate s... 263 5.4e-25 2
UNIPROTKB|H0YEE6 - symbol:PDSS1 "Decaprenyl-diphosphate s... 270 1.8e-23 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 262 1.3e-22 1
UNIPROTKB|F1NMS4 - symbol:PDSS2 "Uncharacterized protein"... 261 1.6e-22 1
ZFIN|ZDB-GENE-040718-43 - symbol:pdss2 "prenyl (decapreny... 259 2.6e-22 1
UNIPROTKB|Q86YH6 - symbol:PDSS2 "Decaprenyl-diphosphate s... 254 1.5e-21 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 247 4.9e-21 1
UNIPROTKB|A6QR05 - symbol:PDSS2 "PDSS2 protein" species:9... 248 6.7e-21 1
UNIPROTKB|J9NVK1 - symbol:PDSS2 "Uncharacterized protein"... 243 2.8e-20 1
RGD|1359372 - symbol:Pdss2 "prenyl (decaprenyl) diphospha... 242 3.6e-20 1
UNIPROTKB|Q5U2R1 - symbol:Pdss2 "Decaprenyl-diphosphate s... 242 3.6e-20 1
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 238 4.4e-20 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 235 9.2e-20 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 232 3.0e-19 1
MGI|MGI:1918615 - symbol:Pdss2 "prenyl (solanesyl) diphos... 233 3.8e-19 1
UNIPROTKB|I3LGK0 - symbol:PDSS2 "Uncharacterized protein"... 217 7.5e-18 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 206 2.1e-15 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 206 2.1e-15 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 204 3.8e-15 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 204 3.8e-15 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 184 7.1e-15 2
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 186 2.9e-12 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 186 3.2e-12 1
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 183 7.4e-12 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 181 7.5e-12 1
FB|FBgn0037044 - symbol:CG10585 species:7227 "Drosophila ... 146 8.7e-12 2
UNIPROTKB|B4DKU5 - symbol:PDSS2 "Decaprenyl-diphosphate s... 178 1.3e-11 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 178 1.3e-11 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 179 2.1e-11 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 173 5.1e-11 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 173 5.1e-11 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 169 1.6e-10 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 170 2.3e-10 1
UNIPROTKB|Q2GL13 - symbol:ispA "Geranyltranstransferase" ... 166 2.8e-10 1
TIGR_CMR|APH_0329 - symbol:APH_0329 "geranyltranstransfer... 166 2.8e-10 1
TIGR_CMR|CJE_1816 - symbol:CJE_1816 "geranyltranstransfer... 165 3.8e-10 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 167 5.3e-10 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 166 6.3e-10 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 160 3.3e-09 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 157 4.4e-09 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 154 9.9e-09 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 146 8.4e-08 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 148 9.3e-08 1
UNIPROTKB|Q5LX41 - symbol:ispA "Farnesyl diphosphate synt... 144 1.4e-07 1
TIGR_CMR|SPO_0248 - symbol:SPO_0248 "farnesyl diphosphate... 144 1.4e-07 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 143 3.4e-07 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 140 4.3e-07 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 140 4.3e-07 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 138 5.4e-07 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 139 7.8e-07 1
UNIPROTKB|I3LJ49 - symbol:I3LJ49 "Uncharacterized protein... 119 8.4e-07 1
UNIPROTKB|Q2GD75 - symbol:NSE_0694 "Putative geranyltrans... 132 2.4e-06 1
TIGR_CMR|NSE_0694 - symbol:NSE_0694 "putative geranyltran... 132 2.4e-06 1
UNIPROTKB|G4N8D6 - symbol:MGG_03432 "Geranylgeranyl pyrop... 138 3.6e-06 1
UNIPROTKB|Q97W92 - symbol:gdS-2 "Hexaprenyl pyrophosphate... 121 4.7e-06 2
ASPGD|ASPL0000062493 - symbol:AN0654 species:162425 "Emer... 132 6.8e-06 1
TAIR|locus:2121149 - symbol:GGR "geranylgeranyl reductase... 130 7.7e-06 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 130 8.7e-06 1
POMBASE|SPAC19G12.12 - symbol:dlp1 "decaprenyl diphosphat... 125 2.3e-05 1
UNIPROTKB|Q83C74 - symbol:CBU_1255 "Dimethylallyltransfer... 115 0.00026 1
TIGR_CMR|CBU_1255 - symbol:CBU_1255 "geranyltranstransfer... 115 0.00026 1
UNIPROTKB|G4NEM8 - symbol:MGG_00758 "Geranylgeranyl pyrop... 116 0.00046 1
UNIPROTKB|Q9P885 - symbol:carG "Geranylgeranyl pyrophosph... 113 0.00057 1
UNIPROTKB|P24322 - symbol:al-3 "Geranylgeranyl pyrophosph... 114 0.00083 1
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
Identities = 209/297 (70%), Positives = 241/297 (81%)
Query: 51 CREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAE 110
CR YS P G HQ++HQSSS++E E+LDPFSLVADELS+L+ +LR MV+AE
Sbjct: 52 CRTTYSLKSPVFGGFSHQLYHQSSSLVE-----EELDPFSLVADELSLLSNKLREMVLAE 106
Query: 111 VPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCI 170
VPKLASAAEYFFK GV+GK+FR T+LLLMATALNVRVPE L D + +ELR RQ+ I
Sbjct: 107 VPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGI 166
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNX 230
AEITEMIHVASLLHDDVLDDADTRRG+GSLN VMGNK++VLAGDFLLSRAC ALA+LKN
Sbjct: 167 AEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRACGALAALKNT 226
Query: 231 XXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQT 290
GETM++T+S++QR SMDYYMQKTYYKTASLISNSCKA+A+L GQT
Sbjct: 227 EVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQT 286
Query: 291 AEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRH-VIYLSLLFIASE 346
AEVA+LAF+YG+NLGLA+QLIDD+LDFTGTSASLGKGSLSDIRH VI +LF E
Sbjct: 287 AEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEE 343
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 407 (148.3 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 88/173 (50%), Positives = 115/173 (66%)
Query: 167 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 226
Q+ +AEITE+IH ASLLHDDV+D+A TRR S N GNK+AVLAGDFLL RA VALA
Sbjct: 196 QRRLAEITELIHTASLLHDDVIDNALTRRSSNSANIEFGNKMAVLAGDFLLGRASVALAR 255
Query: 227 LKNXXXXXXXXXXXXXXXXGETMQM-TTSSDQRC------SMDYYMQKTYYKTASLISNS 279
L++ GE MQ+ T+ D++ ++ YY+QKTY KTASLIS S
Sbjct: 256 LRDPEVTELLATVIANLVEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLISKS 315
Query: 280 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
C+A ALL T +V A+ YG+NLGLA+QL+DD+LD+T + LGK + +D+
Sbjct: 316 CRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGKPAGADL 368
Score = 102 (41.0 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 86 LDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNV 145
+DP +V EL L K +R ++ + P L A+Y+ + EGK RP ++LLM+ A +
Sbjct: 78 VDPLRIVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTRS--EGKHMRPLLVLLMSQATAL 135
Query: 146 RVPEPLHDGVEDALAT 161
P + AL++
Sbjct: 136 TTPRSNRSTSDAALSS 151
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 109/281 (38%), Positives = 168/281 (59%)
Query: 57 WSLPALHGIRHQIHHQSSSVI---EDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVP 112
W P L I + HH S++++ T S E+ DPF L +L L + ++ ++
Sbjct: 11 WPFPKLCSIPWRFHHTSTALMCSCSKTVSDEKYQDPFQLGRKDLKNLYEDIKKELLVSTA 70
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAE 172
+L EY+F G +GK FRP +++LMA A N+ H + E++ Q+ +A
Sbjct: 71 ELREMCEYYFD-G-KGKAFRPMIVVLMARACNIH-----HSN-----SREVQASQRSVAI 118
Query: 173 ITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXX 232
I EMIH ASL+HDDV+DDA++RRG ++N + G + AVLAGDF+LS A +ALA + N
Sbjct: 119 IAEMIHTASLVHDDVIDDANSRRGKMTVNQIWGERKAVLAGDFILSAASLALARIGNTTI 178
Query: 233 XXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAE 292
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L +
Sbjct: 179 ISVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPK 238
Query: 293 VAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
V +A+ YGKN+G+A+QLIDDVLDFT + LGK + +D++
Sbjct: 239 VHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLK 279
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 102/247 (41%), Positives = 152/247 (61%)
Query: 87 DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVR 146
DPFSLV +L + ++ ++ +L + +Y+F G +GK FRP +++LMA A NV
Sbjct: 90 DPFSLVQKDLQNIYDDIKQQLLVSKAELKALCDYYFD-G-KGKAFRPMIVILMARACNV- 146
Query: 147 VPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGN 206
H E L Q+ IA I+EMIH ASL+HDDV+DD+D RRG ++N V G
Sbjct: 147 -----HSNKEGVLLPA----QRSIAMISEMIHTASLVHDDVIDDSDKRRGKNTINNVWGE 197
Query: 207 KLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQ 266
+ A+LAGDF+LS A +ALA + N GE MQ+ + ++ +Y++
Sbjct: 198 RKAILAGDFILSAASMALARIGNTTVVSVLSQVIEDLVRGEFMQLGSKENENERFKHYLE 257
Query: 267 KTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGK 326
KT+ KTASLI+NSCKA+++L EV +A+ YG+N+G+A+QL+DD+LDFT + LGK
Sbjct: 258 KTFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSNANCLGK 317
Query: 327 GSLSDIR 333
S +D++
Sbjct: 318 PSAADLK 324
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 109/269 (40%), Positives = 161/269 (59%)
Query: 68 QIHHQSSSVI--EDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKM 124
+ HH +S+V T S E+ DPF L +L+ L + +R ++ +L +EY+F
Sbjct: 22 RFHHTTSAVCCCSKTQSGEKYTDPFKLGWRDLNGLYEDIRKELLISTTELKEMSEYYFD- 80
Query: 125 GVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLH 184
G +GK FRP +++LMA A N+ H D A+ Q+ IA I EMIH ASL+H
Sbjct: 81 G-KGKAFRPIIVVLMARACNIH-----HSNSRDVQAS-----QRSIALIAEMIHTASLVH 129
Query: 185 DDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXX 244
DDV+DDA +RRG ++N + G K AVLAGD +LS A +ALA + N
Sbjct: 130 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASMALARIGNTTVISILTQVIEDLV 189
Query: 245 XGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNL 304
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN+
Sbjct: 190 RGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNV 249
Query: 305 GLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
G+A+QLIDDVLDFT S +GK + +D++
Sbjct: 250 GIAFQLIDDVLDFTSCSDQMGKPTSADLK 278
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 109/277 (39%), Positives = 164/277 (59%)
Query: 60 PALHGIRHQIHHQSSSVIE--DTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLAS 116
P +H I Q H ++ ++ T S E+ DPF L +L L + +R + +L
Sbjct: 59 PTMHSIS-QFHQRTPAMCSCRQTQSGEKYSDPFKLGWRDLKGLYEDIRKELHISTRELKD 117
Query: 117 AAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEM 176
+EY+F G +GK FRP +++LMA A N+ H+ A E++ Q+ IA + EM
Sbjct: 118 MSEYYFD-G-KGKAFRPIIVVLMARACNIH-----HNN-----AREMQASQRSIALVAEM 165
Query: 177 IHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXX 236
IH A+L+HDDV+DDA +RRG ++N + G K AVLAGD +LS A VALA + N
Sbjct: 166 IHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSML 225
Query: 237 XXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAIL 296
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +
Sbjct: 226 AQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEI 285
Query: 297 AFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
A+ YGKN+G+A+QLIDDVLDFT S +GK + +D++
Sbjct: 286 AYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLK 322
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 108/269 (40%), Positives = 160/269 (59%)
Query: 68 QIHHQSSSVI--EDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKM 124
+ HH + ++ T S E+ DPF L +L L + +R + +L +EY+F
Sbjct: 67 RFHHMTPALCCCSKTRSGEKYTDPFKLGWRDLKGLYEDIRKELFISTTELKEMSEYYFD- 125
Query: 125 GVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLH 184
G +GK FRP +++LMA A N+ H+ D A++ RT IA I EMIH ASL+H
Sbjct: 126 G-KGKAFRPIIVVLMARACNIH-----HNNSRDMQASQ-RT----IALIAEMIHTASLVH 174
Query: 185 DDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXX 244
DDV+DDA +RRG ++N + G K AVLAGD +LS A +ALA + N
Sbjct: 175 DDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLV 234
Query: 245 XGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNL 304
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN+
Sbjct: 235 RGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNV 294
Query: 305 GLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
G+A+QLIDDVLDFT S +GK + +D++
Sbjct: 295 GIAFQLIDDVLDFTSCSDQMGKPTSADLK 323
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 105/275 (38%), Positives = 162/275 (58%)
Query: 62 LHGIRHQIHHQS--SSVIEDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAA 118
++G+ + HH + + +T S E+ DPF + +L L + +R + +L +
Sbjct: 70 MYGVS-RFHHTTPVACCFSETLSGEKYTDPFKIGWRDLKGLYEDIRKELFISTAELREMS 128
Query: 119 EYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIH 178
EY F G +GK FRP +++LMA A N+ H+ + A+ Q+ IA I EMIH
Sbjct: 129 EYHFD-G-KGKAFRPIIVVLMARACNIH-----HNNARNVQAS-----QRAIALIAEMIH 176
Query: 179 VASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXX 238
ASL+HDD++DDA +RRG ++N + G K AVLAGD +LS A +ALA + N
Sbjct: 177 TASLVHDDIIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQ 236
Query: 239 XXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAF 298
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+
Sbjct: 237 VIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAY 296
Query: 299 DYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
YGKN+G+A+QLIDDVLDFT S +GK + +D++
Sbjct: 297 QYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLK 331
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 105/267 (39%), Positives = 157/267 (58%)
Query: 68 QIHHQSSSVIEDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGV 126
+ HH + T S E+ DPF L +L L + +R ++ +L +EY+F G
Sbjct: 76 RFHHTTPD--SKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLISTSELKEMSEYYFD-G- 131
Query: 127 EGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDD 186
+GK FRP ++ LMA A N+ H+ + ++ Q+ IA I EMIH ASL+HDD
Sbjct: 132 KGKAFRPIIVALMARACNIH-----HNN-----SRHVQASQRAIALIAEMIHTASLVHDD 181
Query: 187 VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXG 246
V+DDA +RRG ++N + G K AVLAGD +LS A +ALA + N G
Sbjct: 182 VIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRG 241
Query: 247 ETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGL 306
E +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN+G+
Sbjct: 242 EFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGI 301
Query: 307 AYQLIDDVLDFTGTSASLGKGSLSDIR 333
A+QLIDDVLDFT S +GK + +D++
Sbjct: 302 AFQLIDDVLDFTSCSDQMGKPTSADLK 328
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 207 (77.9 bits), Expect = 9.9e-40, Sum P(3) = 9.9e-40
Identities = 47/101 (46%), Positives = 61/101 (60%)
Query: 162 ELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRAC 221
++ +Q+ +AEI EMIH ASLLHDDV+D +D+RRG S N NK+AVLAGDFLL RA
Sbjct: 192 DILPKQRRLAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNKMAVLAGDFLLGRAS 251
Query: 222 VALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD 262
VA+A L+N GE MQ+ + Q + D
Sbjct: 252 VAIARLRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNND 292
Score = 193 (73.0 bits), Expect = 9.9e-40, Sum P(3) = 9.9e-40
Identities = 32/74 (43%), Positives = 55/74 (74%)
Query: 260 SMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTG 319
+ +YY+ KTY KTASL+S SC+A A+L+G ++ + +G+NLGL +Q++DD+LD+T
Sbjct: 350 AFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTS 409
Query: 320 TSASLGKGSLSDIR 333
+ ++GK S +D++
Sbjct: 410 SDKTIGKPSQADLK 423
Score = 118 (46.6 bits), Expect = 9.9e-40, Sum P(3) = 9.9e-40
Identities = 29/88 (32%), Positives = 52/88 (59%)
Query: 70 HHQSSSVIEDTDSQEQL---------DPFSLVADELSILAKRLRSMVVAEVPKLASAAEY 120
HH SS+ ++ E+L DPFS+V+ E+S LAK + +++ + P L + Y
Sbjct: 23 HHSSSTFKTAVETAEKLVTPPTSKFSDPFSIVSHEMSNLAKSIANLIGSGHPTLNRVSSY 82
Query: 121 FFKMGVEGKRFRPTVLLLMATALNVRVP 148
+F+ EGK RP ++L+++ AL+ ++P
Sbjct: 83 YFE--AEGKNVRPLIVLILSKALS-KIP 107
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 213 (80.0 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 51/108 (47%), Positives = 63/108 (58%)
Query: 148 PEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNK 207
PEPL + D L +Q+ +AEI EMIH ASLLHDDV+D +DTRRG S N NK
Sbjct: 157 PEPLPEETFDKQRGIL-PKQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNK 215
Query: 208 LAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSS 255
+AVLAGDFLL RA V+++ L N GE MQ+ +S
Sbjct: 216 MAVLAGDFLLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQLKNTS 263
Score = 197 (74.4 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 38/82 (46%), Positives = 57/82 (69%)
Query: 254 SSDQ--RCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLI 311
S DQ + +YY+ KTY KTA+LIS SC+ A+L+G + V +D+G+NLG+ +QL+
Sbjct: 304 SHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLV 363
Query: 312 DDVLDFTGTSASLGKGSLSDIR 333
DD+LDFT + LGK S +D++
Sbjct: 364 DDMLDFTVSGKDLGKPSGADLK 385
Score = 101 (40.6 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 87 DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVR 146
+P SLV+ E++ LAK + +++ + P L Y+F+ EGK+ RP ++LL++ AL+
Sbjct: 44 NPISLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFE--TEGKKVRPLLVLLLSRALS-E 100
Query: 147 VP 148
+P
Sbjct: 101 IP 102
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 99/244 (40%), Positives = 144/244 (59%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F +VAD+L L L S+V AE P L SAAE F G GKR RP ++ L++ A
Sbjct: 99 FEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAG--GKRMRPGLVFLVSRAT----- 151
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKL 208
E A EL + + EI EMIH ASL+HDDVLD++D RRG +++ + G ++
Sbjct: 152 ------AELAGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRV 205
Query: 209 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKT 268
AVLAGDF+ ++A LA+L+N GE Q ++ D +D YM K+
Sbjct: 206 AVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKS 265
Query: 269 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGS 328
YYKTASL++ S K A+ + ++VA + +GKNLGL++Q++DD+LDFT ++ LGK +
Sbjct: 266 YYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPA 325
Query: 329 LSDI 332
+D+
Sbjct: 326 ANDL 329
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 106/267 (39%), Positives = 152/267 (56%)
Query: 72 QSSSVIEDTDSQEQLDP------FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMG 125
QS +V D QE P F LVA +L L L S+V AE P L SAAE F G
Sbjct: 66 QSQTVSFDL-KQESKQPISLVTLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIF--G 122
Query: 126 VEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHD 185
GKR RP ++ L++ H E A EL T + +AEI EMIH ASL+HD
Sbjct: 123 AGGKRMRPGLVFLVS-----------HATAELAGLKELTTEHRRLAEIIEMIHTASLIHD 171
Query: 186 DVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXX 245
DVLD++D RRG +++ + G ++AVLAGDF+ ++A LA+L+N
Sbjct: 172 DVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFAS 231
Query: 246 GETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLG 305
GE Q ++ D +D Y+ K++YKTASL++ S K A+ + +V +++GKNLG
Sbjct: 232 GEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLG 291
Query: 306 LAYQLIDDVLDFTGTSASLGKGSLSDI 332
L++Q++DD+LDFT ++ LGK + SD+
Sbjct: 292 LSFQIVDDILDFTQSTEQLGKPAGSDL 318
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 98/287 (34%), Positives = 162/287 (56%)
Query: 51 CREAYSWSLPALHGIR-HQ-IHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVV 108
C ++ +S + +R H +H Q + + Q+DP+ ++ D+L +R ++
Sbjct: 77 CSQSLQYSQSSKANLRQHSSVHTQQPA---GPVREFQIDPYIILDDDLKYFYDDVRYLLK 133
Query: 109 AEV--PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTR 166
+ P+L + A Y+F G +GK RP V +LMA A+N + H +L +
Sbjct: 134 SGTSQPELDTIASYYFD-G-QGKALRPMVTMLMAKAINYHLNNESH---------QLVHK 182
Query: 167 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 226
Q+ IA +EM+H ASL+HDDV+D +D RRG S+N + +K +AGD++LS A + +A
Sbjct: 183 QRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIAR 242
Query: 227 LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALL 286
L++ GE MQ+ + + +Y+ KTY KTASLI+N+ KA A++
Sbjct: 243 LRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVI 302
Query: 287 AGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
A VA +AF YG+N+GLA+QL+DD+LDF ++ +GK + +D++
Sbjct: 303 AQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLK 349
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 102/275 (37%), Positives = 151/275 (54%)
Query: 73 SSSVIEDTDSQEQLDPF-SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRF 131
S++ +++ Q Q D L+ + S + L + V L Y+F+ G GK
Sbjct: 35 STAFVQEHVRQMQNDIMVQLIPQDESGAVENLADLNVTS--NLGRMTHYYFQQG--GKML 90
Query: 132 RPTVLLLMATALNVRVPEPLHDGVEDALATE---------LRTRQQCIAEITEMIHVASL 182
RPTV LLM A N + + L+TE + Q I I EMIH ASL
Sbjct: 91 RPTVSLLMGNACNSAANRSISEEYLAMLSTERSGIAAHLSVCQNQYKIGMIAEMIHTASL 150
Query: 183 LHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXX 242
+HDDV+D+A+TRRG S+N V GNK++VL GDF+L+RA L S+
Sbjct: 151 VHDDVIDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCSIGKPNIISVMASIIED 210
Query: 243 XXXGETMQMTTSSDQRCSMDY---YMQKTYYKTASLISNSCKAIALLA-GQTAEVAILAF 298
GE MQM+T+ +D Y++KT+ KTASL ++SC++ A+LA G ++ +AF
Sbjct: 211 LVLGEFMQMSTTPTDATPVDRMKAYIEKTHRKTASLFASSCRSAAILADGSDLKLHEIAF 270
Query: 299 DYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
+YG+NLG+A+QL DD+LDF T+ +GK +D++
Sbjct: 271 EYGRNLGIAFQLADDLLDFIATADEMGKPVAADLK 305
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 95/258 (36%), Positives = 154/258 (59%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLM--ATAL----- 143
L+ +EL ++ +R M+ + L ++Y+ +GK+ RP+++LLM AT+L
Sbjct: 36 LIKNELEQISPGIRQMLNSNSEFLEECSKYYTI--AQGKQMRPSLVLLMSKATSLCHGID 93
Query: 144 -NVRVPEPLHDGVEDALAT-ELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLN 201
+V + + D + +T ++ Q +A+ITEMIH+ASLLHDDV+D A+ RRG S N
Sbjct: 94 RSVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPSSN 153
Query: 202 FVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSD----- 256
GN+ ++LAG+F+L+RA A+A L+N GE +Q+ + D
Sbjct: 154 VAFGNRRSILAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLE 213
Query: 257 -QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVL 315
++ + DYY++K++ KTASLIS SCKA +L + VA A +YG+ +G A+QL+DDVL
Sbjct: 214 IKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVL 273
Query: 316 DFTGTSASLGKGSLSDIR 333
D+T +LGK + +D++
Sbjct: 274 DYTSKDDTLGKAAGADLK 291
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 78/175 (44%), Positives = 116/175 (66%)
Query: 158 ALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLL 217
AL++ + Q +AEI EMIH ASL+HDDV+D+A TRR + S+N NKLA+L GD+LL
Sbjct: 196 ALSSTVHGSQLKLAEIVEMIHTASLVHDDVIDEASTRRDVISINHSYTNKLAILCGDYLL 255
Query: 218 SRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLIS 277
+RA V L++++N GE MQ S+ S D Y+QKTY KT SLI+
Sbjct: 256 ARASVVLSTIRNPDVTECMSTALAELVEGEFMQ--AKSNGVVSFDNYLQKTYLKTGSLIT 313
Query: 278 NSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
NSC++ A+L+G + + ++ ++GKNLGLA+Q++DD+LD+TG++ GK + D+
Sbjct: 314 NSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDL 368
Score = 234 (87.4 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 57/139 (41%), Positives = 84/139 (60%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P L+S + Y+F++ +GKR RPT++LL++ AL+ V H ++L+ +A
Sbjct: 168 PILSSISSYYFEL--KGKRIRPTIVLLLSKALSSTV----H-------GSQLK-----LA 209
Query: 172 EITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXX 231
EI EMIH ASL+HDDV+D+A TRR + S+N NKLA+L GD+LL+RA V L++++N
Sbjct: 210 EIVEMIHTASLVHDDVIDEASTRRDVISINHSYTNKLAILCGDYLLARASVVLSTIRNPD 269
Query: 232 XXXXXXXXXXXXXXGETMQ 250
GE MQ
Sbjct: 270 VTECMSTALAELVEGEFMQ 288
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 282 (104.3 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 59/157 (37%), Positives = 89/157 (56%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
+A + E IH A+LLHDDV+D+A RRG S N V GN+ +VL GDFL S++ + +
Sbjct: 67 LASVIEFIHTATLLHDDVVDNATLRRGNASANEVWGNEASVLVGDFLFSKSFSLMVEAGD 126
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE +Q+ +SD + + Y++ KTA L+S +C+A A+L
Sbjct: 127 LRILKVISGATTIIAEGEVLQLLCTSDLEMTQERYIEVVKSKTAVLLSAACEAGAILGTS 186
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGK 326
+AE D+G +LG+A+QL+DD LD+T + GK
Sbjct: 187 SAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGK 223
Score = 71 (30.1 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
SLV D+L + + R + ++V + EY G GKR RP +LLL A
Sbjct: 6 SLVGDDLKNVELQFRKDLESDVYLIRKVGEYVLASG--GKRIRPMLLLLSA 54
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 265 (98.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 62/182 (34%), Positives = 99/182 (54%)
Query: 166 RQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALA 225
R + +A E+IH+ASL+HDDV+DDAD RRG ++ N+ A+ GD+L +R+ +A
Sbjct: 65 RMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLERMA 124
Query: 226 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIAL 285
L N GE Q+ + Y+++ KTA LI+ SC+ AL
Sbjct: 125 ELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLGAL 184
Query: 286 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI-RHVIYLSLLFIA 344
AG + + +G +G+++Q+ DD+LDFTGT LGK + SD+ + + L +L+
Sbjct: 185 AAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYAL 244
Query: 345 SE 346
S+
Sbjct: 245 SD 246
Score = 73 (30.8 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
+S ++D+L+ + + L V +E L AA + + G GKR RP +LL A
Sbjct: 7 YSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAG--GKRIRPVFVLLAA 56
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 290 (107.1 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 60/163 (36%), Positives = 91/163 (55%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
IA I E IH A+LLHDDV+D+++ RRG + N + GN +VL GDFL +R+ + L +
Sbjct: 73 IAAIIEFIHTATLLHDDVVDESNMRRGRETANALFGNSASVLVGDFLYTRSFQMMTKLGD 132
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE +Q+ +D + + YMQ Y KTA L + + A++A Q
Sbjct: 133 MRIMDILSEATNIVAEGEVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQ 192
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
A++ DYGK LG A+QL+DD++D+T + +GK D+
Sbjct: 193 DAKIEQAMADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDL 235
Score = 39 (18.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATA 142
+L +++ + + + ++V + Y G GKR RP + +L A A
Sbjct: 12 ALAQSDMAAVNDLIYDQLQSDVALINQLGIYIVNGG--GKRMRPMLTVLAARA 62
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 279 (103.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 62/163 (38%), Positives = 87/163 (53%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
IA + E IH A+LLHDDV+D++D RRG + N GN +VL GDF+ +RA + SL +
Sbjct: 69 IAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLGS 128
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE +Q+ +D + + YM+ Y KTA L + + +LAG
Sbjct: 129 LKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGC 188
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
T E DYG+ LG A+QLIDD+LD+ LGK D+
Sbjct: 189 TPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDL 231
Score = 46 (21.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATAL 143
L A +++ + + + ++V +L + Y+ G GKR RP + +L A A+
Sbjct: 9 LTAQDMAGVNAAILEQLNSDV-QLINQLGYYIVSG-GGKRIRPMIAVLAARAV 59
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 282 (104.3 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 63/163 (38%), Positives = 87/163 (53%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
+A I E IH ASLLHDDV+D++ RRG + N + GN +VL GDFL +R+ + L +
Sbjct: 77 LAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTELDS 136
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE +Q+ +D + + YM+ Y KTA L + A+LAG
Sbjct: 137 MRVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGA 196
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ E DYGK LG A+QL DD+LD+T S LGK D+
Sbjct: 197 SPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDL 239
Score = 42 (19.8 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 81 DSQEQLDPFSLVAD-ELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLM 139
+S L+ +AD ++ + + + + ++V + Y G GKR RP + +L
Sbjct: 6 ESIMDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGG--GKRLRPLLSVLA 63
Query: 140 ATALN 144
A A++
Sbjct: 64 ARAVD 68
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 247 (92.0 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 53/163 (32%), Positives = 90/163 (55%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
+A E+IH+ASL+HDDV+D A RRG ++N G+++A+ GD+L +++ + +++
Sbjct: 69 VAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEI 128
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE Q+ + ++ Y+++ KTA LI+ SC+ A+ AG
Sbjct: 129 PEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGA 188
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ F YG +G++YQ+IDD+LDF T LGK + D+
Sbjct: 189 NRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDL 231
Score = 74 (31.1 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLL 138
+S + +++++ K L+ V +E P + AA + G GKR RP +LL
Sbjct: 7 YSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAG--GKRIRPVFVLL 54
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 267 (99.0 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 59/162 (36%), Positives = 84/162 (51%)
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNX 230
A E IH A+LLHDDV+D++D RRG + N GN +VL GDF+ +R+ + L +
Sbjct: 95 AAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSM 154
Query: 231 XXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQT 290
GE Q+ +D + YMQ Y KTA L + + A+L +
Sbjct: 155 KILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDAS 214
Query: 291 AEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
EV + +YGK LG A+QLIDDV+D+T +GK D+
Sbjct: 215 PEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDL 256
Score = 53 (23.7 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATAL 143
+L A++++ + + + + + ++V + Y G GKR RP + +L A AL
Sbjct: 33 ALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGG--GKRLRPLLAVLSAKAL 84
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 267 (99.0 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 59/162 (36%), Positives = 84/162 (51%)
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNX 230
A E IH A+LLHDDV+D++D RRG + N GN +VL GDF+ +R+ + L +
Sbjct: 95 AAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVLVGDFIYTRSFQMMTELGSM 154
Query: 231 XXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQT 290
GE Q+ +D + YMQ Y KTA L + + A+L +
Sbjct: 155 KILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDAS 214
Query: 291 AEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
EV + +YGK LG A+QLIDDV+D+T +GK D+
Sbjct: 215 PEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDL 256
Score = 53 (23.7 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATAL 143
+L A++++ + + + + + ++V + Y G GKR RP + +L A AL
Sbjct: 33 ALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGG--GKRLRPLLAVLSAKAL 84
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 268 (99.4 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 58/163 (35%), Positives = 92/163 (56%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
IA E+IH A+LLHDDV+D+++ RRG + N + GNK ++L GDFLL+ + L KN
Sbjct: 75 IAAAIELIHNATLLHDDVIDESELRRGEKTSNVIWGNKASILVGDFLLAISFQWLIKCKN 134
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE QM +S + S + Y++ KTA+L S +C++ A LA
Sbjct: 135 LNILSILSQASKDVIVGEVQQMISSHNINISKEKYIEIISAKTAALFSATCESAANLAQT 194
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ E ++G N G+++Q++DD+LD+T + GK +D+
Sbjct: 195 SNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGKKLGNDL 237
Score = 51 (23.0 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
SLV +L + + + + ++ K G GKR RP + ++ LN
Sbjct: 14 SLVQQDLDSMESLILHQNNKHITLITEIVQHLIKSG--GKRIRPIIFFIICKMLN 66
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 268 (99.4 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 60/165 (36%), Positives = 90/165 (54%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
+A E IH A+LLHDDV+D++ RRG + N + NK +VL GD+L +R+ + +
Sbjct: 77 LAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGS 136
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG- 288
GE +QMT +SD R Y+Q KTA+L S + + ++AG
Sbjct: 137 LRVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVGGVIAGV 196
Query: 289 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
A+V L F+YG LG+A+Q+ DD+LD+ G + + GK D R
Sbjct: 197 PEAQVRAL-FEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFR 240
Score = 48 (22.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 92 VADELSILAKRLRSMVVAE-VPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
++ E++ + +R+ + +E P++ + + G GKR RP + L A
Sbjct: 17 LSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAG--GKRLRPMLTLAAA 64
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 268 (99.4 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 60/165 (36%), Positives = 90/165 (54%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
+A E IH A+LLHDDV+D++ RRG + N + NK +VL GD+L +R+ + +
Sbjct: 77 LAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGS 136
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG- 288
GE +QMT +SD R Y+Q KTA+L S + + ++AG
Sbjct: 137 LRVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVGGVIAGV 196
Query: 289 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
A+V L F+YG LG+A+Q+ DD+LD+ G + + GK D R
Sbjct: 197 PEAQVRAL-FEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFR 240
Score = 48 (22.0 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 92 VADELSILAKRLRSMVVAE-VPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
++ E++ + +R+ + +E P++ + + G GKR RP + L A
Sbjct: 17 LSQEMAAVNALIRTRMASEHAPRIPEVTAHLVEAG--GKRLRPMLTLAAA 64
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 263 (97.6 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 59/169 (34%), Positives = 90/169 (53%)
Query: 166 RQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALA 225
R+ +A E +H A+LLHDDV+D +D RRG+ + N + GNK ++L GDFL + A +
Sbjct: 60 RRIVVAAAIEFLHSATLLHDDVVDKSDMRRGVETANSIWGNKASILVGDFLFATAFQWIV 119
Query: 226 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIAL 285
S + GE Q+ SS S Y++ KTA L S +C++ A+
Sbjct: 120 SCNSIQLLSVLSNTASIIVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACESAAV 179
Query: 286 L--AGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
L G A+ D+G N G+ +Q++DD+LD+T LGK + +DI
Sbjct: 180 LHDVGTLQRNALR--DWGFNFGIVFQILDDILDYTANQNELGKRTYNDI 226
Score = 52 (23.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLL 137
LVA EL + + +EV +A ++ G GKR RP +LL
Sbjct: 4 LVASELQEMESLIVKQRHSEVQLIADIIQHLILSG--GKRTRPVMLL 48
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 243 (90.6 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 51/157 (32%), Positives = 87/157 (55%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
+A EMIH+ASL+HDDV+DDA+ RRG ++ N++A+ GD++L+ + + +
Sbjct: 97 VAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINE 156
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE Q+ + ++ Y+++ KTA LI+ SC+ A+ +G
Sbjct: 157 PKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGA 216
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGK 326
++ + +G +G++YQ+IDD+LDFT T LGK
Sbjct: 217 DEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGK 253
Score = 72 (30.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLL 138
+S + D++ ++ + L V ++ P L+ A + + G GKR RP +LL
Sbjct: 35 YSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAG--GKRIRPVFVLL 82
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 252 (93.8 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 58/173 (33%), Positives = 96/173 (55%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
+A E+IH+A+L+HDDV+D++ RRG+ ++ GNK+++ GD + +++ + + S KN
Sbjct: 74 LAVALELIHMATLVHDDVVDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKN 133
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE Q+ + + S+ Y+ K KTA L+S SC+ ++A
Sbjct: 134 NYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANV 193
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRH-VIYLSLL 341
+ V YG +G+A+Q+IDD+LDFT LGK SD+R +I L +L
Sbjct: 194 SPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVL 246
Score = 56 (24.8 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 81 DSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
D +++L F LV ++L + + L V L A + K G GKR RP LL A
Sbjct: 6 DQEKKL--FELVKEDLRKIEQELIKEVSERNEFLHDPAMHLLKAG--GKRLRPAFALLAA 61
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 252 (93.8 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 58/173 (33%), Positives = 96/173 (55%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
+A E+IH+A+L+HDDV+D++ RRG+ ++ GNK+++ GD + +++ + + S KN
Sbjct: 74 LAVALELIHMATLVHDDVVDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKN 133
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE Q+ + + S+ Y+ K KTA L+S SC+ ++A
Sbjct: 134 NYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANV 193
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRH-VIYLSLL 341
+ V YG +G+A+Q+IDD+LDFT LGK SD+R +I L +L
Sbjct: 194 SPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVL 246
Score = 56 (24.8 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 81 DSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
D +++L F LV ++L + + L V L A + K G GKR RP LL A
Sbjct: 6 DQEKKL--FELVKEDLRKIEQELIKEVSERNEFLHDPAMHLLKAG--GKRLRPAFALLAA 61
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 263 (97.6 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 58/165 (35%), Positives = 89/165 (53%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
+A +EM+H+A+L+HDD +D ADTRR ++N V G + A+L GDFL + A A N
Sbjct: 72 LATSSEMLHIATLVHDDAIDKADTRRSRRTVNSVWGLEKAILLGDFLFAHAAEVAAETDN 131
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 289
GE Q S + S + Y+++ KTA+L + K A+LA
Sbjct: 132 MRIVTLFAQTLQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILADA 191
Query: 290 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRH 334
+ + YG NLGL++Q++DD+LDF G + +GK SD+ +
Sbjct: 192 SPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPVGSDLNN 236
Score = 44 (20.5 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 137 LLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMI 177
+L +++ + E L GVED +R+Q E+ EM+
Sbjct: 1 MLKLSSIYAPINEGLK-GVEDEFKLVSESRKQSFPEMAEML 40
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 253 (94.1 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 61/174 (35%), Positives = 93/174 (53%)
Query: 175 EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXX 234
E++H+ASL+HDD +D++D RRG S++ A+ G FLL+RA +A++ N
Sbjct: 74 ELVHMASLVHDDYIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFHQ 133
Query: 235 XXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVA 294
GE QM + S Y+++ KTA LI SC + L+ Q E +
Sbjct: 134 IFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEASCH-LGALSSQLDEQS 192
Query: 295 ILAF-DYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR--HVIYLSLLFIAS 345
+G +G++YQ+IDD+LD+T A+LGK SDIR H+ Y + IA+
Sbjct: 193 TYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIAN 246
Score = 49 (22.3 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 101 KRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLL 138
KRL + ++ + AA + G GKR RP +LL
Sbjct: 19 KRLYECIQSDSETINKAAHHILSSG--GKRVRPMFVLL 54
>GENEDB_PFALCIPARUM|PFB0130w [details] [associations]
symbol:PFB0130w "polyprenyl synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 263 (97.6 bits), Expect = 5.4e-25, Sum P(2) = 5.4e-25
Identities = 63/178 (35%), Positives = 104/178 (58%)
Query: 168 QC-IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 226
QC I +E+IH+ SLLHDDV+DD++ RRG+ +L+ GNK+++L+GD+LL+RA A
Sbjct: 266 QCKIIAASEIIHMGSLLHDDVIDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAG 325
Query: 227 LKNXXXXXXXXXXXXXXXXGETMQMTTS-SDQRCSMDYYMQKTYYKTASLISNSCKAIAL 285
+ GE +Q ++ ++ Y+ K+Y+KTASL S+ IA+
Sbjct: 326 TGSPKICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACIAI 385
Query: 286 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHVIYLS-LLF 342
L+ + + L F+ G ++G+A+QL DD LD+ + K L+D+++ I + LLF
Sbjct: 386 LSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYK-IDDNTNKPILNDLKNNIKTAPLLF 442
Score = 50 (22.7 bits), Expect = 5.4e-25, Sum P(2) = 5.4e-25
Identities = 18/98 (18%), Positives = 44/98 (44%)
Query: 47 KVLGCREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSM 106
+VL C + + ++ H +H + E T+ +DP++L ++ + + + ++
Sbjct: 119 EVLLCMDVLQYEEDKVNRELHLLHSYFNK--ERTN----IDPYTLCESKIKNIDEYIYNI 172
Query: 107 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
+ + Y + +GKRFR + +L+ L+
Sbjct: 173 IKTNYKNIDEFITYIYLY--KGKRFRVILSILLKNILH 208
>UNIPROTKB|O96130 [details] [associations]
symbol:OPP "Octaprenyl pyrophosphate synthase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 263 (97.6 bits), Expect = 5.4e-25, Sum P(2) = 5.4e-25
Identities = 63/178 (35%), Positives = 104/178 (58%)
Query: 168 QC-IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS 226
QC I +E+IH+ SLLHDDV+DD++ RRG+ +L+ GNK+++L+GD+LL+RA A
Sbjct: 266 QCKIIAASEIIHMGSLLHDDVIDDSNKRRGVIALHKKFGNKISILSGDYLLARASSIFAG 325
Query: 227 LKNXXXXXXXXXXXXXXXXGETMQMTTS-SDQRCSMDYYMQKTYYKTASLISNSCKAIAL 285
+ GE +Q ++ ++ Y+ K+Y+KTASL S+ IA+
Sbjct: 326 TGSPKICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACIAI 385
Query: 286 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHVIYLS-LLF 342
L+ + + L F+ G ++G+A+QL DD LD+ + K L+D+++ I + LLF
Sbjct: 386 LSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYK-IDDNTNKPILNDLKNNIKTAPLLF 442
Score = 50 (22.7 bits), Expect = 5.4e-25, Sum P(2) = 5.4e-25
Identities = 18/98 (18%), Positives = 44/98 (44%)
Query: 47 KVLGCREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSM 106
+VL C + + ++ H +H + E T+ +DP++L ++ + + + ++
Sbjct: 119 EVLLCMDVLQYEEDKVNRELHLLHSYFNK--ERTN----IDPYTLCESKIKNIDEYIYNI 172
Query: 107 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
+ + Y + +GKRFR + +L+ L+
Sbjct: 173 IKTNYKNIDEFITYIYLY--KGKRFRVILSILLKNILH 208
>UNIPROTKB|H0YEE6 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL390961 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HGNC:HGNC:17759 Ensembl:ENST00000491711 Uniprot:H0YEE6
Length = 158
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 55/129 (42%), Positives = 81/129 (62%)
Query: 205 GNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYY 264
G K AVLAGD +LS A +ALA + N GE +Q+ + ++ +Y
Sbjct: 3 GEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHY 62
Query: 265 MQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASL 324
++KT+ KTASLI+NSCKA+++L V +A+ YGKN+G+A+QLIDDVLDFT S +
Sbjct: 63 LEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQM 122
Query: 325 GKGSLSDIR 333
GK + +D++
Sbjct: 123 GKPTSADLK 131
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 66/191 (34%), Positives = 101/191 (52%)
Query: 144 NVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFV 203
NV+ + L + +A E + A I E+IH+ASLLHDD++D+++ RRG S+N
Sbjct: 26 NVKSGKKLRSKLLLTIADESEIAFKICAAI-ELIHLASLLHDDIIDESELRRGARSVNAE 84
Query: 204 MGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY 263
G K A++ GD L S+A L+ + + GE M + + +
Sbjct: 85 FGTKNALMLGDILYSKAFYELSKM-DARFASIISDAVVKLAIGELMDVDLGEKFNINKEA 143
Query: 264 YMQKTYYKTASLISNSCKAIALLAG-QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSA 322
Y++ Y KTA LI S + A+LAG + A +YGKNLGLA+Q+IDD+LD
Sbjct: 144 YLKMIYNKTAVLIEASARCGAILAGLYEKDFA----EYGKNLGLAFQMIDDILDIKSDEK 199
Query: 323 SLGKGSLSDIR 333
LGK +++D +
Sbjct: 200 ILGKPAMNDFK 210
>UNIPROTKB|F1NMS4 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 OMA:QIGEAQE GO:GO:0050347
EMBL:AADN02002114 EMBL:AADN02002115 EMBL:AADN02002116
EMBL:AADN02002117 EMBL:AADN02002118 IPI:IPI00590994
Ensembl:ENSGALT00000024716 Uniprot:F1NMS4
Length = 359
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 69/238 (28%), Positives = 127/238 (53%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L +A + + + R V+LL++ A P
Sbjct: 33 LLSDELSNIAMQVRKLVGTKHPLLDTARGFVYDSR-NNLQMRGLVVLLISKAAG---PST 88
Query: 151 LHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKLA 209
+ + + + + Q+ +AEITE+IH A L+H +++ + + G L + GNK+A
Sbjct: 89 AELSFQHNMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQFGNKMA 148
Query: 210 VLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY----YM 265
VL+GDFLL+ AC +LA L+N G + + SS+ + D +
Sbjct: 149 VLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSRSSENCLTDDIGISTWK 208
Query: 266 QKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSAS 323
++ + ++L++ SC+A LA +AE+ +AF YGK++ ++++L D+ F S+S
Sbjct: 209 EQVFLSHSALLAKSCQAAMELAKHSAEMQDMAFRYGKHMSMSHKLHSDLQPFVKESSS 266
>ZFIN|ZDB-GENE-040718-43 [details] [associations]
symbol:pdss2 "prenyl (decaprenyl) diphosphate
synthase, subunit 2" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000092 Pfam:PF00348
ZFIN:ZDB-GENE-040718-43 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:57107 HOVERGEN:HBG058860 KO:K12505 EMBL:BC075908
IPI:IPI00489656 RefSeq:NP_001002351.1 UniGene:Dr.88524
ProteinModelPortal:Q6DHQ9 STRING:Q6DHQ9 PRIDE:Q6DHQ9 GeneID:436624
KEGG:dre:436624 InParanoid:Q6DHQ9 NextBio:20831069 Bgee:Q6DHQ9
Uniprot:Q6DHQ9
Length = 370
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 71/237 (29%), Positives = 121/237 (51%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A +R +V + P L +A + + + R V+LLM+ A +P
Sbjct: 49 LLSDELSNVAMHVRKLVGTKHPLLNTARGFVYDSR-NNLQMRGLVVLLMSKAAGPSSSDP 107
Query: 151 LHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKLA 209
+HD ++ + + Q+ +AEITE+IH A L+H +++ + G L + GNK+A
Sbjct: 108 IHD----SMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTNSDGPLKDMQFGNKMA 163
Query: 210 VLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQ-RCSMDYYMQKT 268
VL+GDFLL+ AC LA L + G + + S+++ ++ + +
Sbjct: 164 VLSGDFLLANACTGLAQLNDTKVVELISSAIGDVVQGIYHESSGSAEEDSLTVASWEDQA 223
Query: 269 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLG 325
+ +L++ SC+A LA E LAF YGK+L L ++L ++ F S S G
Sbjct: 224 FLSHGALLAKSCQAAMKLARHNTEAQNLAFQYGKHLALGHKLNSELQPFV-KSGSEG 279
>UNIPROTKB|Q86YH6 [details] [associations]
symbol:PDSS2 "Decaprenyl-diphosphate synthase subunit 2"
species:9606 "Homo sapiens" [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
GO:GO:0005739 GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0006744 GO:GO:0046982 Orphanet:139485
GO:GO:0051290 GO:GO:0050878 Orphanet:255249 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AB210839 EMBL:AF254956 EMBL:AL121957 EMBL:AL590489
EMBL:AL355586 EMBL:AL591516 EMBL:BC029491 EMBL:BC039906
IPI:IPI00384708 IPI:IPI00643460 RefSeq:NP_065114.3
UniGene:Hs.486095 ProteinModelPortal:Q86YH6 SMR:Q86YH6
STRING:Q86YH6 PhosphoSite:Q86YH6 DMDM:73620006 PaxDb:Q86YH6
PRIDE:Q86YH6 Ensembl:ENST00000369031 Ensembl:ENST00000369037
GeneID:57107 KEGG:hsa:57107 UCSC:uc003prt.2 UCSC:uc003prv.3
CTD:57107 GeneCards:GC06M107473 HGNC:HGNC:23041 HPA:HPA029685
HPA:HPA029686 MIM:610564 MIM:614652 neXtProt:NX_Q86YH6
PharmGKB:PA134957167 HOGENOM:HOG000294216 HOVERGEN:HBG058860
InParanoid:Q86YH6 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
PhylomeDB:Q86YH6 BioCyc:MetaCyc:HS15203-MONOMER GenomeRNAi:57107
NextBio:62953 ArrayExpress:Q86YH6 Bgee:Q86YH6 CleanEx:HS_PDSS2
Genevestigator:Q86YH6 GermOnline:ENSG00000164494 GO:GO:0050347
Uniprot:Q86YH6
Length = 399
Score = 254 (94.5 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 73/258 (28%), Positives = 132/258 (51%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L +A + R V+LL++ A P
Sbjct: 72 LLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSW-NSLQLRGLVVLLISKAAG---PSS 127
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKL 208
++ ++ + + + + Q+ +AEITE+IH+A L+H +++ + + G L + GNK+
Sbjct: 128 VNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKI 187
Query: 209 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY----Y 264
A+L+GDFLL+ AC LA L+N G + +TS + + D +
Sbjct: 188 AILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTW 247
Query: 265 MQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDF----TGT 320
++T+ +L++ SC+A LA AEV +AF YGK++ +++++ DV F T
Sbjct: 248 KEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEKTSD 307
Query: 321 SASLGKGSLSDIRHVIYL 338
S + S + H +L
Sbjct: 308 SMTFNLNSAPVVLHQEFL 325
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 72/207 (34%), Positives = 103/207 (49%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP V+LL A A G E + Q +A + E IH A+LLHDDV
Sbjct: 53 GKRLRPLVVLLTARAC----------GYEQDV------EHQELATVIEFIHTATLLHDDV 96
Query: 188 LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGE 247
+D + RRG + N + GN +VL GDFL SRA LA N GE
Sbjct: 97 VDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQILARRSNVPIMKILATTTNQISEGE 156
Query: 248 TMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLA--GQTAEVAILAFDYGKNLG 305
Q+ +D Y + KTA L S + + A++A +T + ++ AF G +LG
Sbjct: 157 VWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAF--GFHLG 214
Query: 306 LAYQLIDDVLDFTGTSASLGKGSLSDI 332
+AYQ+IDD+LD++ +++L K D+
Sbjct: 215 MAYQIIDDLLDYSKDASALDKNVGDDL 241
>UNIPROTKB|A6QR05 [details] [associations]
symbol:PDSS2 "PDSS2 protein" species:9913 "Bos taurus"
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
eggNOG:COG0142 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
HOGENOM:HOG000294216 HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE
OrthoDB:EOG44QT18 GO:GO:0050347 EMBL:DAAA02025951 EMBL:DAAA02025952
EMBL:DAAA02025953 EMBL:DAAA02025954 EMBL:BC150063 IPI:IPI00704753
RefSeq:NP_001093855.1 UniGene:Bt.18477 STRING:A6QR05
Ensembl:ENSBTAT00000029142 GeneID:521115 KEGG:bta:521115
InParanoid:A6QR05 NextBio:20873244 Uniprot:A6QR05
Length = 395
Score = 248 (92.4 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 82/302 (27%), Positives = 149/302 (49%)
Query: 48 VLGCREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMV 107
V+ CR S S PA +Q+ ++ ++ S L L++DEL +A ++R +V
Sbjct: 30 VISCRGQSSRS-PAQW---NQVVSEAEKIVGYPTSFMSLR--CLLSDELCNIAMQVRKLV 83
Query: 108 VAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDA-LATELRTR 166
+ P L + + R V+LL++ A P ++ ++ + + + +
Sbjct: 84 GTQHPLLTTVRGLIHDRQ-NNLQLRGLVVLLISKAAG---PNSVNASCQNYDMVSGIYSC 139
Query: 167 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKLAVLAGDFLLSRACVALA 225
Q+ +AEITE+IH A L+H +++ + + G L + GNK+A+L+GDFLL+ AC LA
Sbjct: 140 QRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLA 199
Query: 226 SLKNXXXXXXXXXXXXXXXXGETMQMTT-SSDQRCSMDY----YMQKTYYKTASLISNSC 280
L+N G + +T + + R + D + ++T+ +L++ SC
Sbjct: 200 LLQNTKVVELLASALMDLVQGVYYENSTLAKENRITDDIGISTWKEQTFLSHGALLAKSC 259
Query: 281 KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDF----TGTSASLGKGSLSDIRHVI 336
+A LA AEV +AF YGK++ +++++ D+L F TG S + S + H
Sbjct: 260 QAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLLPFIKEKTGDSLTFNLNSAPVVLHQE 319
Query: 337 YL 338
+L
Sbjct: 320 FL 321
>UNIPROTKB|J9NVK1 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GeneTree:ENSGT00530000063378
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
KO:K12505 OMA:QIGEAQE EMBL:AAEX03008588 EMBL:AAEX03008589
EMBL:AAEX03008590 RefSeq:XP_539071.2 Ensembl:ENSCAFT00000043165
GeneID:481950 KEGG:cfa:481950 Uniprot:J9NVK1
Length = 400
Score = 243 (90.6 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 70/259 (27%), Positives = 132/259 (50%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L +A+ + R V+LL++ A P
Sbjct: 72 LLSDELSNIALQVRKLVGTQHPLLTTASGLVHDSR-HNLQLRGLVVLLISKAAG---PSS 127
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKL 208
++ ++ + + + + Q+ +AEITE+IH A L+H +++ + + G L + GNK+
Sbjct: 128 MNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKI 187
Query: 209 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQR-----CSMDY 263
A+L+GDFLL+ AC LA L+N G + +TS+ + +
Sbjct: 188 AILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSAKENHITEDIGIST 247
Query: 264 YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDF----TG 319
+ ++T+ +L++ SC+A LA A+V +AF YGK++ +++++ D+ F T
Sbjct: 248 WKEQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQYGKHMAMSHKINSDLQPFIKEKTS 307
Query: 320 TSASLGKGSLSDIRHVIYL 338
S + S + H +L
Sbjct: 308 DSVTFNLNSAPVVLHQEFL 326
>RGD|1359372 [details] [associations]
symbol:Pdss2 "prenyl (decaprenyl) diphosphate synthase, subunit
2" species:10116 "Rattus norvegicus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA;ISO] [GO:0050878 "regulation of body fluid
levels" evidence=IEA;ISO] [GO:0051290 "protein
heterotetramerization" evidence=IEA;ISO] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
RGD:1359372 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0006744 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
HOGENOM:HOG000294216 HOVERGEN:HBG058860 KO:K12505 OrthoDB:EOG44QT18
EMBL:BC085898 IPI:IPI00367901 RefSeq:NP_001014271.1
UniGene:Rn.20063 ProteinModelPortal:Q5U2R1 PRIDE:Q5U2R1
GeneID:365592 KEGG:rno:365592 UCSC:RGD:1359372 NextBio:687727
ArrayExpress:Q5U2R1 Genevestigator:Q5U2R1 Uniprot:Q5U2R1
Length = 401
Score = 242 (90.2 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 71/243 (29%), Positives = 124/243 (51%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L + A F + R V+LL++ A P
Sbjct: 73 LLSDELSNVAMQVRKLVGTQHP-LLTTARGFVHDSRHNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKL 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKI 188
Query: 209 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD-----Y 263
AVL+GDFLL+ AC LA L+N G + + S+ D
Sbjct: 189 AVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRIST 248
Query: 264 YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSAS 323
+ ++T+ +L++ SCKA LA A V +AF YGK++ +++++ D+ F AS
Sbjct: 249 WKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFIKDKAS 308
Query: 324 LGK 326
K
Sbjct: 309 DSK 311
>UNIPROTKB|Q5U2R1 [details] [associations]
symbol:Pdss2 "Decaprenyl-diphosphate synthase subunit 2"
species:10116 "Rattus norvegicus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0050878 "regulation of body fluid levels"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 RGD:1359372 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0006744 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 CTD:57107 HOGENOM:HOG000294216 HOVERGEN:HBG058860
KO:K12505 OrthoDB:EOG44QT18 EMBL:BC085898 IPI:IPI00367901
RefSeq:NP_001014271.1 UniGene:Rn.20063 ProteinModelPortal:Q5U2R1
PRIDE:Q5U2R1 GeneID:365592 KEGG:rno:365592 UCSC:RGD:1359372
NextBio:687727 ArrayExpress:Q5U2R1 Genevestigator:Q5U2R1
Uniprot:Q5U2R1
Length = 401
Score = 242 (90.2 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 71/243 (29%), Positives = 124/243 (51%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L + A F + R V+LL++ A P
Sbjct: 73 LLSDELSNVAMQVRKLVGTQHP-LLTTARGFVHDSRHNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKL 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKI 188
Query: 209 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD-----Y 263
AVL+GDFLL+ AC LA L+N G + + S+ D
Sbjct: 189 AVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRIST 248
Query: 264 YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSAS 323
+ ++T+ +L++ SCKA LA A V +AF YGK++ +++++ D+ F AS
Sbjct: 249 WKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFIKDKAS 308
Query: 324 LGK 326
K
Sbjct: 309 DSK 311
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 63/177 (35%), Positives = 92/177 (51%)
Query: 158 ALATELRTRQQCIAEIT-EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFL 216
AL T + A T E+IH A+L+HDDV+D+ RRG ++ + GNK++VL GDFL
Sbjct: 58 ALCKNADTNAEIRAAATIELIHNATLMHDDVVDENSIRRGKPNIKSIHGNKISVLTGDFL 117
Query: 217 LSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLI 276
LS A + KN GE +Q+ S + S Y++ KTA L
Sbjct: 118 LSVAFEIILECKNLSVVLLLSKTAKQLSEGEMLQLQ-SIGEIVSESEYLEVIARKTAVLF 176
Query: 277 SNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
S + + A+L G+ V IL + G +G+A+Q+ DDVLD+ G +GK +D R
Sbjct: 177 SAAAEIAAILTGKQEYVVILR-EIGFLIGMAFQITDDVLDY-GEPQEVGKSVGNDFR 231
Score = 149 (57.5 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 51/151 (33%), Positives = 71/151 (47%)
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAE 172
KL S EY KM GKR R +L L++ AL D A E+R A
Sbjct: 31 KLKSI-EYAKKMLSSGKRIR-ALLSLLSFALCKNA---------DTNA-EIRA-----AA 73
Query: 173 ITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXX 232
E+IH A+L+HDDV+D+ RRG ++ + GNK++VL GDFLLS A + KN
Sbjct: 74 TIELIHNATLMHDDVVDENSIRRGKPNIKSIHGNKISVLTGDFLLSVAFEIILECKNLSV 133
Query: 233 XXXXXXXXXXXXXGETMQMTTSSDQRCSMDY 263
GE +Q+ + + +Y
Sbjct: 134 VLLLSKTAKQLSEGEMLQLQSIGEIVSESEY 164
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 69/221 (31%), Positives = 108/221 (48%)
Query: 128 GKRFRPTVLLLMATALNVRV-PEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDD 186
GKRFRP + T L+ ++ P+P DA A + + EMIH+A+L HDD
Sbjct: 56 GKRFRP-----LFTVLSAQIGPQP------DAAAVTVA------GAVIEMIHLATLYHDD 98
Query: 187 VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXG 246
V+D+A RRG S N GN +A+LAGD+LL+ A +A L G
Sbjct: 99 VMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARL-GPEAVRIIADTFAQLVTG 157
Query: 247 ETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGL 306
+ + +S+ S++ Y++ KT SLI + + + +G T E G +G
Sbjct: 158 QMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGT 217
Query: 307 AYQLIDDVLDFTGTSASLGKGSLSDIRHVIY-LSLLFIASE 346
A+Q+ DD++D S GK +D+R ++ L +L+ E
Sbjct: 218 AFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRE 258
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 232 (86.7 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 71/250 (28%), Positives = 118/250 (47%)
Query: 90 SLVADELSILAKRLRSMVVAEVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
S +A+ I+ + + + + P +L SA+ Y G GKR RPT+LLL A +L V
Sbjct: 9 SAIAERREIVNEAVSEQLPVQKPERLYSASRYLLDAG--GKRLRPTILLLAAESL-ADV- 64
Query: 149 EPLHDGVEDALATELRTRQQCIAEIT-EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNK 207
EPL + A ++ E+I +L+HDD++DD D RRG+ +++ +
Sbjct: 65 EPLSADYRQFPSLPGDEVDVLSAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAVHREYDLE 124
Query: 208 LAVLAGDFLLSRACVALASL-----KNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD 262
A+LAGD L S+A + ++ G+ + + + + +
Sbjct: 125 TAILAGDTLYSKAFEYMLDTGAPAERSVEALDELATTCTEICEGQALDVDFENRSDVTTE 184
Query: 263 YYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSA 322
Y++ +KTA L + + A+L G E YG ++G A+Q+ DD+LD T S
Sbjct: 185 EYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTAPSD 244
Query: 323 SLGKGSLSDI 332
LGK SD+
Sbjct: 245 ELGKQRGSDL 254
>MGI|MGI:1918615 [details] [associations]
symbol:Pdss2 "prenyl (solanesyl) diphosphate synthase,
subunit 2" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IDA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IDA]
[GO:0050878 "regulation of body fluid levels" evidence=IMP]
[GO:0051290 "protein heterotetramerization" evidence=IPI]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 MGI:MGI:1918615 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006744
GO:GO:0046982 GO:GO:0051290 GO:GO:0050878 eggNOG:COG0142
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107 HOGENOM:HOG000294216
HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
EMBL:AB210840 EMBL:AK017329 EMBL:AK140091 EMBL:BC147693
EMBL:BC147694 EMBL:BC147752 EMBL:BC147753 IPI:IPI00316693
IPI:IPI00659599 IPI:IPI00672429 RefSeq:NP_001161761.1
RefSeq:NP_082048.2 UniGene:Mm.490430 ProteinModelPortal:Q33DR3
SMR:Q33DR3 STRING:Q33DR3 PhosphoSite:Q33DR3 PRIDE:Q33DR3
Ensembl:ENSMUST00000095725 Ensembl:ENSMUST00000159139 GeneID:71365
KEGG:mmu:71365 UCSC:uc007ezh.2 UCSC:uc007ezi.2 UCSC:uc011xdk.1
InParanoid:B2RWA7 ChiTaRS:PDSS2 NextBio:333637 Bgee:Q33DR3
Genevestigator:Q33DR3 GermOnline:ENSMUSG00000038240 Uniprot:Q33DR3
Length = 401
Score = 233 (87.1 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 68/243 (27%), Positives = 123/243 (50%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V P L +A + R V+LL++ A P
Sbjct: 73 LLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSR-HNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKL 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKI 188
Query: 209 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD-----Y 263
A+L+GDFLL+ AC LA L+N G + + S+ + D
Sbjct: 189 AILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGIST 248
Query: 264 YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSAS 323
+ ++T+ +L++ SC+A LA A V +AF YGK++ +++++ D+ F AS
Sbjct: 249 WKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFIKDKAS 308
Query: 324 LGK 326
K
Sbjct: 309 DSK 311
>UNIPROTKB|I3LGK0 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
Ensembl:ENSSSCT00000024393 OMA:DIVELMS Uniprot:I3LGK0
Length = 241
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 61/204 (29%), Positives = 110/204 (53%)
Query: 130 RFRPTVLLLMATALNVRVPEPLHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVL 188
+ R V+LL++ A P ++ ++ + + + + Q+ +AEITE+IH A L+H ++
Sbjct: 12 QLRGLVVLLISKAAG---PSSVNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIV 68
Query: 189 DDADTRRGIGSL-NFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGE 247
+ + + G L + GNK+A+L+GDFLL+ AC LA L+N G
Sbjct: 69 NLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGV 128
Query: 248 TMQMTTSS-DQRCSMDY----YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGK 302
+ +TS+ + R + D + ++T+ +L++ SC+A LA AEV +AF YGK
Sbjct: 129 YHENSTSAKENRITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGK 188
Query: 303 NLGLAYQLIDDVLDFTG--TSASL 324
++ +++++ D+ F TS SL
Sbjct: 189 HMAMSHKINSDLQPFIKEKTSDSL 212
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 206 (77.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 56/170 (32%), Positives = 84/170 (49%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS------ 226
EMIH SL+HDD+ +DD D RRG + + V G +A+LAGD LL+ A + ++S
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAA 133
Query: 227 -----LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCK 281
L G+ + M + ++ + KT +LI S K
Sbjct: 134 VGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIK 193
Query: 282 AIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 331
A A+L G A+ YG+ +GLA+Q+ DD+LD GT+ +GK + SD
Sbjct: 194 AGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSD 243
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 206 (77.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 56/170 (32%), Positives = 84/170 (49%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS------ 226
EMIH SL+HDD+ +DD D RRG + + V G +A+LAGD LL+ A + ++S
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAA 133
Query: 227 -----LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCK 281
L G+ + M + ++ + KT +LI S K
Sbjct: 134 VGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIK 193
Query: 282 AIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 331
A A+L G A+ YG+ +GLA+Q+ DD+LD GT+ +GK + SD
Sbjct: 194 AGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSD 243
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 204 (76.9 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 78/246 (31%), Positives = 115/246 (46%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P + A Y K G GKR RP VL+L A + PE L + A+ E C+
Sbjct: 30 PVIHQAMNYSLKAG--GKRLRP-VLMLAAGEWSGIAPEKL---LPAAVGVE------CL- 76
Query: 172 EITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS--- 226
H SL+HDD+ +D+ D RRG + + V G +A+LAGD LL++A A
Sbjct: 77 ------HTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLE 130
Query: 227 -------LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNS 279
+ G+ + ++ SS+ + + + KTA LI S
Sbjct: 131 QGIPAERVVRVIQELAVASGSEGLIAGQVVDLS-SSEAKKDPEVLLYIHLNKTARLIRYS 189
Query: 280 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRH--VIY 337
A +LAG T E DYG++LGLA+Q++DD+LD G +GK SD ++ + Y
Sbjct: 190 LIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTY 249
Query: 338 LSLLFI 343
+SL I
Sbjct: 250 VSLFGI 255
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 204 (76.9 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 78/246 (31%), Positives = 115/246 (46%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P + A Y K G GKR RP VL+L A + PE L + A+ E C+
Sbjct: 30 PVIHQAMNYSLKAG--GKRLRP-VLMLAAGEWSGIAPEKL---LPAAVGVE------CL- 76
Query: 172 EITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS--- 226
H SL+HDD+ +D+ D RRG + + V G +A+LAGD LL++A A
Sbjct: 77 ------HTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLE 130
Query: 227 -------LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNS 279
+ G+ + ++ SS+ + + + KTA LI S
Sbjct: 131 QGIPAERVVRVIQELAVASGSEGLIAGQVVDLS-SSEAKKDPEVLLYIHLNKTARLIRYS 189
Query: 280 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRH--VIY 337
A +LAG T E DYG++LGLA+Q++DD+LD G +GK SD ++ + Y
Sbjct: 190 LIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTY 249
Query: 338 LSLLFI 343
+SL I
Sbjct: 250 VSLFGI 255
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 184 (69.8 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 47/143 (32%), Positives = 70/143 (48%)
Query: 175 EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXX 234
EM+H ASL+HDD+LD RR + S G A+L GD+L++++ +A S
Sbjct: 80 EMMHSASLIHDDLLDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKS-IAFISPYGEKVIQ 138
Query: 235 XXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVA 294
GE + + + DY+ + Y KTASL + S A G E+A
Sbjct: 139 DFGKAGMDMAEGEVLDLKLEDESFGENDYF-KCIYKKTASLFAISASIGAYTGGAEEELA 197
Query: 295 ILAFDYGKNLGLAYQLIDDVLDF 317
+G LG AYQ++DD+L+F
Sbjct: 198 ERFSHFGNALGTAYQIVDDILEF 220
Score = 55 (24.4 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 105 SMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
S+ + E P L E+ G GKR RP +LLL++
Sbjct: 29 SITLIEDPGLKKMVEHVCHSG--GKRIRPIILLLVS 62
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 186 (70.5 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 60/209 (28%), Positives = 96/209 (45%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GK RP ++ + A A +P H + A++ EL +H SL+HDD+
Sbjct: 72 GKAIRPALVFVAAEAAGA---DP-HSAIPGAVSVEL-------------VHNFSLVHDDL 114
Query: 188 LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN---XXXXXXXXXXXXXXX 244
+D + RR ++ + G+ +A+LAGD +LS A L +
Sbjct: 115 MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELI 174
Query: 245 XGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNL 304
G+ S ++D ++ KTA+L++ S + ALLAG V YG+++
Sbjct: 175 RGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHI 234
Query: 305 GLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
GLA+QL+DD+L G GK SD+R
Sbjct: 235 GLAFQLVDDLLGIWGRPEITGKPVYSDLR 263
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 186 (70.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 77/270 (28%), Positives = 123/270 (45%)
Query: 77 IEDTDSQEQLDPFSLVADELSI-LAKRLRSMVVAEVPKLA-SAAEYFFKMGVEGKRFRPT 134
IE ++E + F + E +I + K L ++ + P + A Y G GKR RP
Sbjct: 67 IEAAQTEEPFN-FKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAG--GKRVRP- 122
Query: 135 VLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDAD 192
+L +A E + E+A+A C E MIH SL+HDD+ +D+ D
Sbjct: 123 -MLCLAAC------ELVGGNQENAMAAA------CAVE---MIHTMSLIHDDLPCMDNDD 166
Query: 193 TRRGIGSLNFVMGNKLAVLAGDFLL---------SRACVALASLKNXXXXXXXXXXXXXX 243
RRG + + + G +AVLAGD LL S A V + +
Sbjct: 167 LRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGL 226
Query: 244 XXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQT-AEVAILAFDYGK 302
G+ + + + S++ +KTA+L+ +S A+L G T EV L + +
Sbjct: 227 VAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLR-RFAR 285
Query: 303 NLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+GL +Q++DD+LD T +S LGK + D+
Sbjct: 286 CIGLLFQVVDDILDVTKSSEELGKTAGKDL 315
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 183 (69.5 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 81/281 (28%), Positives = 127/281 (45%)
Query: 73 SSSVIEDTDSQEQLDP-----FSLVADELSILAKRLRSMVVAEVP-KLASAAEYFFKMGV 126
SSSV+ D+ Q +P S + + ++ K L S V P K+ A Y G
Sbjct: 56 SSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAG- 114
Query: 127 EGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDD 186
GKR RP VL + A L G E++ A C E MIH SL+HDD
Sbjct: 115 -GKRVRP-VLCIAACELV---------GGEESTAMPAA----CAVE---MIHTMSLIHDD 156
Query: 187 V--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXX 244
+ +D+ D RRG + + V G +AVLAGD LLS A LAS +
Sbjct: 157 LPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGE 216
Query: 245 XGETM--------QMTTSSDQRCSMD----YYMQKTY-YKTASLISNSCKAIALLAGQTA 291
+ + Q+ S + ++ +++ + +KTA+L+ S A++ G +
Sbjct: 217 LAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSD 276
Query: 292 EVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ + + +GL +Q++DD+LD T +S LGK + D+
Sbjct: 277 DEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDL 317
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 181 (68.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 59/214 (27%), Positives = 95/214 (44%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP + LL A L G+E E R +A E H SL+HDD+
Sbjct: 30 GKRLRPLITLLTARMLG---------GLE----AEARAIP--LAASIETAHTFSLIHDDI 74
Query: 188 LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGE 247
+D + RRG+ + + V G+ A+LAGD L + A +A +
Sbjct: 75 MDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLSEA 134
Query: 248 TMQMTTSS------DQRCSMDY--YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFD 299
+Q++ ++ +D Y+ KT +LI + + A+ AG +E+ + +
Sbjct: 135 AIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGE 194
Query: 300 YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
G N G+A+Q+ DD+L G GK +D+R
Sbjct: 195 VGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLR 228
>FB|FBgn0037044 [details] [associations]
symbol:CG10585 species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] EMBL:AE014296 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 eggNOG:COG0142 GeneTree:ENSGT00530000063378
GO:GO:0000010 InterPro:IPR017446 PANTHER:PTHR12001 KO:K12505
EMBL:AY051597 RefSeq:NP_649277.1 UniGene:Dm.1022 SMR:Q9VP87
MINT:MINT-762100 EnsemblMetazoa:FBtr0078287 GeneID:40323
KEGG:dme:Dmel_CG10585 UCSC:CG10585-RA FlyBase:FBgn0037044
InParanoid:Q9VP87 OMA:IILAMQD OrthoDB:EOG4CFXQJ GenomeRNAi:40323
NextBio:818180 Uniprot:Q9VP87
Length = 448
Score = 146 (56.5 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 43/143 (30%), Positives = 81/143 (56%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DE++ +A LR +V + P L A++ G + ++LL++ A P
Sbjct: 90 LLSDEIANVALHLRKLVGSAHP-LMKTAKHLLYNGKNTMQAWGLIVLLVSKAAG-HAPS- 146
Query: 151 LHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLD-DADTRRG--IGSLNFV-MGN 206
+ D +D A L + Q+ +AE+TEMI ++ L+H+ V++ + T+ G + + + + GN
Sbjct: 147 VPDVEQDKSAGVLHS-QRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDDMSFGN 205
Query: 207 KLAVLAGDFLLSRACVALASLKN 229
K+ +L GD+LL + LA+L+N
Sbjct: 206 KIGLLTGDYLLGHSSAELANLRN 228
Score = 82 (33.9 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 274 SLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDF 317
SL+ SC+A LAGQ+ E+ A+ +GK+L LA+Q D F
Sbjct: 308 SLLGKSCQASLKLAGQSEELQRHAYRFGKHLALAWQACLDAEPF 351
>UNIPROTKB|B4DKU5 [details] [associations]
symbol:PDSS2 "Decaprenyl-diphosphate synthase subunit 2"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL121957 EMBL:AL590489
EMBL:AL355586 EMBL:AL591516 UniGene:Hs.486095 HGNC:HGNC:23041
HOGENOM:HOG000294216 HOVERGEN:HBG058860 EMBL:AK296717
IPI:IPI00908713 SMR:B4DKU5 STRING:B4DKU5 Ensembl:ENST00000453874
UCSC:uc011eal.1 Uniprot:B4DKU5
Length = 297
Score = 178 (67.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 52/176 (29%), Positives = 92/176 (52%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L +A + R V+LL++ A P
Sbjct: 72 LLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSW-NSLQLRGLVVLLISKAAG---PSS 127
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKL 208
++ ++ + + + + Q+ +AEITE+IH+A L+H +++ + + G L + GNK+
Sbjct: 128 VNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKI 187
Query: 209 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQ-RCSMDY 263
A+L+GDFLL+ AC LA L+N G + +TS Q + +DY
Sbjct: 188 AILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKAQEKGRLDY 243
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 178 (67.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 75/251 (29%), Positives = 110/251 (43%)
Query: 99 LAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDA 158
LA +L + + + PKL A Y +G GKR RP + + A++ L+D DA
Sbjct: 18 LAAKLEGLTIND-PKLIEAMRYGLLIG--GKRMRPYLAYITGEAVSA----DLND--IDA 68
Query: 159 LATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFL 216
+A L E IH SLLHDD+ +DD D RRG + + A+LAGD L
Sbjct: 69 VAGAL-----------ECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDAL 117
Query: 217 LSRACVALA----SLKNXXXXX----------XXXXXXXXXXXGETMQMTTSSDQRCSMD 262
+ A LA S+ G+ + + + + S+
Sbjct: 118 QTLAFDILANHTFSMNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAATG-KNISLG 176
Query: 263 YYMQKTYYKTASLISNSCKAIALLAGQ-TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTS 321
KT +L+ S A+ +GQ T E I+ +Y + +GLAYQ+ DD++D T T
Sbjct: 177 ELEVLHSLKTGALLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTE 236
Query: 322 ASLGKGSLSDI 332
LGK SDI
Sbjct: 237 EELGKPVGSDI 247
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 55/183 (30%), Positives = 89/183 (48%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXX 232
EMIH +SL+HDD+ +DDAD RRG + + V G +AVLAGD LL+ A + + +
Sbjct: 135 EMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLV 194
Query: 233 X---XXXXXXXXXXXXGETMQMTTSSDQRCSM-----DYYMQKTYY----KTASLISNSC 280
G + CS D +++ + KTA+L+ +
Sbjct: 195 APERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAAA 254
Query: 281 KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI--RHVIYL 338
A++ G T E YG+ +GL +Q++DD++D T ++ LGK + D+ R + Y
Sbjct: 255 VLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTYP 314
Query: 339 SLL 341
L+
Sbjct: 315 RLI 317
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 173 (66.0 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 77/252 (30%), Positives = 111/252 (44%)
Query: 114 LASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEI 173
L A Y + G GKR RP LLL AT L G AL
Sbjct: 33 LREAMAYSLEAG--GKRLRP--LLLFATLQAFDKERNLGVGAACAL-------------- 74
Query: 174 TEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVAL------- 224
EMIH SL+HDD+ +DD D RRG + + V G +AVLAGD LL+ A +
Sbjct: 75 -EMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKE 133
Query: 225 --ASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY--YMQKTYYKTASLISNSC 280
A K G + + ++ ++D Y+ K +KT L+ +
Sbjct: 134 ISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHK--HKTGKLLEFAV 191
Query: 281 KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHV--IYL 338
A ++L+ T E ++ K +GLA+Q+ DD+LD GT +GK SD+ + Y
Sbjct: 192 LAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYT 251
Query: 339 SLLFI--ASEIL 348
+L + A +IL
Sbjct: 252 TLFTVDRAKDIL 263
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 173 (66.0 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 77/252 (30%), Positives = 111/252 (44%)
Query: 114 LASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEI 173
L A Y + G GKR RP LLL AT L G AL
Sbjct: 33 LREAMAYSLEAG--GKRLRP--LLLFATLQAFDKERNLGVGAACAL-------------- 74
Query: 174 TEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVAL------- 224
EMIH SL+HDD+ +DD D RRG + + V G +AVLAGD LL+ A +
Sbjct: 75 -EMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKE 133
Query: 225 --ASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY--YMQKTYYKTASLISNSC 280
A K G + + ++ ++D Y+ K +KT L+ +
Sbjct: 134 ISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHK--HKTGKLLEFAV 191
Query: 281 KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHV--IYL 338
A ++L+ T E ++ K +GLA+Q+ DD+LD GT +GK SD+ + Y
Sbjct: 192 LAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYT 251
Query: 339 SLLFI--ASEIL 348
+L + A +IL
Sbjct: 252 TLFTVDRAKDIL 263
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 169 (64.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 53/174 (30%), Positives = 83/174 (47%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFL-------LSRAC 221
A E IH SL+HDD+ +DD D RRG+ + + G A+LAGD L LS A
Sbjct: 70 AAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDAD 129
Query: 222 VALASLKNXXXXXXXXXXXXXXXX---GETMQMTTSSDQRCSMDYYMQKTYYKTASLISN 278
+ S ++ G+ + + + +D + +KT +LI
Sbjct: 130 MPEVSDRDRISMISELASASGIAGMCGGQALDLDAEG-KHVPLDALERIHRHKTGALIRA 188
Query: 279 SCKAIALLAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 331
+ + AL AG A+ D Y +++GLA+Q+ DD+LD G +A+LGK +D
Sbjct: 189 AVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGAD 242
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 170 (64.9 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 52/172 (30%), Positives = 82/172 (47%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXX 232
EMIH +SL+HDD+ +DDAD RRG + + G +AVLAGD LL+ A + + N
Sbjct: 132 EMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLV 191
Query: 233 X---XXXXXXXXXXXXGETMQMTTSSDQRCSM-----DYYMQKTYY----KTASLISNSC 280
G + CS D +++ + KTA+L+ +
Sbjct: 192 APERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAA 251
Query: 281 KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
A++ G T E Y + +GL +Q++DD+LD T ++ LGK + D+
Sbjct: 252 VLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDV 303
>UNIPROTKB|Q2GL13 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 166 (63.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 60/191 (31%), Positives = 86/191 (45%)
Query: 164 RTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRAC 221
RT C+A E++H SL+HDD+ +D+A TRRG S + G LA+L GD LL+
Sbjct: 70 RTLPLCLA--IEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTF 127
Query: 222 VALASLKNXXXXXXXXXXXXXXXXGET-M---QMTTSSDQRCSMDYYMQKTYYKTASLIS 277
L+S+ G M Q + S++ Q KTA L S
Sbjct: 128 ELLSSMDESCTVKCAIIRVISDACGHRGMVAGQALDMGNLEPSLEAVKQIHKLKTARLFS 187
Query: 278 NSCKAIALLAG-QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHVI 336
+C++ A+LA TA LA YG+ LG A+Q DD+ D + L + +
Sbjct: 188 AACESGAILAEVSTANQQALA-SYGETLGCAFQAKDDLCDINEDDSCLNIARILGREKTL 246
Query: 337 -YLSLLFIASE 346
Y+ L SE
Sbjct: 247 EYIDYLLHQSE 257
>TIGR_CMR|APH_0329 [details] [associations]
symbol:APH_0329 "geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 166 (63.5 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 60/191 (31%), Positives = 86/191 (45%)
Query: 164 RTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRAC 221
RT C+A E++H SL+HDD+ +D+A TRRG S + G LA+L GD LL+
Sbjct: 70 RTLPLCLA--IEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTF 127
Query: 222 VALASLKNXXXXXXXXXXXXXXXXGET-M---QMTTSSDQRCSMDYYMQKTYYKTASLIS 277
L+S+ G M Q + S++ Q KTA L S
Sbjct: 128 ELLSSMDESCTVKCAIIRVISDACGHRGMVAGQALDMGNLEPSLEAVKQIHKLKTARLFS 187
Query: 278 NSCKAIALLAG-QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHVI 336
+C++ A+LA TA LA YG+ LG A+Q DD+ D + L + +
Sbjct: 188 AACESGAILAEVSTANQQALA-SYGETLGCAFQAKDDLCDINEDDSCLNIARILGREKTL 246
Query: 337 -YLSLLFIASE 346
Y+ L SE
Sbjct: 247 EYIDYLLHQSE 257
>TIGR_CMR|CJE_1816 [details] [associations]
symbol:CJE_1816 "geranyltranstransferase" species:195099
"Campylobacter jejuni RM1221" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 OMA:DLISEHK RefSeq:YP_179786.1 PDB:3NPK
PDBsum:3NPK ProteinModelPortal:Q5HSE9 STRING:Q5HSE9 GeneID:3232443
KEGG:cjr:CJE1816 PATRIC:20045454 ProtClustDB:CLSK872468
BioCyc:CJEJ195099:GJC0-1850-MONOMER Uniprot:Q5HSE9
Length = 281
Score = 165 (63.1 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 69/244 (28%), Positives = 106/244 (43%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P A K G GK FR +LL + + PE L+ ++ ALA E
Sbjct: 23 PFFNEALALMLKAG--GKHFRAQLLL---SVVQSNKPELLNQALDVALALEF-------- 69
Query: 172 EITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVAL--ASL 227
IH SL+HDD+ +D+AD RRGI +L+ A+L GD L + A + L A L
Sbjct: 70 -----IHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHL 124
Query: 228 KNXXXXXXXXXXXXXXXX-GETMQMTTS---SDQRCSMDYYMQKTYYKTASLISNSCKAI 283
K+ G + D+R S++ +KTA LI+ + K
Sbjct: 125 KDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMG 184
Query: 284 ALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHVIYLSLLFI 343
+ E + + G LGL +Q+ DD++D T + GK + +DI +++LL +
Sbjct: 185 CEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIHKNSFVNLLGL 244
Query: 344 ASEI 347
I
Sbjct: 245 EQAI 248
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 167 (63.8 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 48/172 (27%), Positives = 84/172 (48%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA----------CV 222
EMIH +SL+HDD+ +D+AD RRG + + V G +AVLAGD LL+ A V
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLV 194
Query: 223 ALASLKNXXXXXXXXXXXXXXXXGETMQMTTS--SDQRCSMDYYMQKTYYKTASLISNSC 280
A + G+ + + + + + +++ +KTA+L+ +
Sbjct: 195 APEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAA 254
Query: 281 KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
++ G T + Y + +GL +Q++DD+LD T ++ LGK + D+
Sbjct: 255 VLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDV 306
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 166 (63.5 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 81/296 (27%), Positives = 131/296 (44%)
Query: 56 SWSLPALHGIR-HQIHHQSSSVIEDTDSQEQL-----DPFSLVADELSILAKRLRSMVVA 109
S S+P I+ + + S+V+ T E + D S + + + + + L S V
Sbjct: 17 SASIPGFIKIQPFLLRRKLSTVLSVTARDEGIIHNHFDFTSYMIGKANAVNEALDSAVSL 76
Query: 110 EVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQ 168
P K+ A Y + GKR RP VL + A L G E+++A
Sbjct: 77 REPIKIHEAIRY--SLLARGKRVRP-VLCIAACELV---------GGEESVALPAA---- 120
Query: 169 CIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA------ 220
C E MIH SL+HDD+ +D+ D RRG + + V G +AVLAGD L+S A
Sbjct: 121 CAVE---MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT 177
Query: 221 --CVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSS-DQR-CSMDYYMQKTYYKTASLI 276
V+ A + G+ + +T+ DQ ++ +KTA L+
Sbjct: 178 STAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLL 237
Query: 277 SNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ A++ G + E + + +GL +Q++DD+LD T +S LGK + D+
Sbjct: 238 EAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 293
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 160 (61.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 47/168 (27%), Positives = 76/168 (45%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
++ E++H +LLHDDV+D TRRG ++ V G +A+L GD L + A L L +
Sbjct: 94 VSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTD 153
Query: 230 XXXXXXXXXXXXXXXX----GETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIAL 285
G+ ++D Y++ KTA+L + C A+
Sbjct: 154 ECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAAL-TGCCCALGA 212
Query: 286 LAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
L + I A + +G LGLA+Q +DD++ G GK +D+
Sbjct: 213 LVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDL 260
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 157 (60.3 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 54/173 (31%), Positives = 79/173 (45%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLK 228
A E IH SL+HDD+ +DD D RRG +++ AVLAGD LL+ A LAS +
Sbjct: 71 AAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDALLTLAFKILASSE 130
Query: 229 NXXXXX---------XXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNS 279
G+ + M R ++ + KT +LIS +
Sbjct: 131 THDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPR-DLNTITRMQRLKTGALISYA 189
Query: 280 CKAIALLA-GQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 331
+A ++ + AE LA + +LGLAYQ+ DD+LD G + +GK D
Sbjct: 190 LEAGGIIGHAREAERNALA-GFANDLGLAYQIADDILDAEGDESIVGKAVSKD 241
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 154 (59.3 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 75/254 (29%), Positives = 114/254 (44%)
Query: 110 EVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQC 169
E+ +L A Y G GKR RP + AL + PE + A A EL
Sbjct: 27 ELARLYEAMRYSVMNG--GKRVRPLLAYAACEALGGK-PEQANGA---ACAVEL------ 74
Query: 170 IAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVAL--- 224
IH SL+HDD+ +DD D RRG + + A+LAGD L S A AL
Sbjct: 75 -------IHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDP 127
Query: 225 ------ASLK-NXXXXXXXXXXXXXXXXGETMQMTTSS---DQRCSMDYYMQKTYYKTAS 274
A ++ G+ + + + DQ+ +++Y M + +KT +
Sbjct: 128 ALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQ-ALEY-MHR--HKTGA 183
Query: 275 LISNSCKAIALLAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 333
LI S AL +G+ + + A Y + +GLA+Q+ DD+LD +A+LGK +DI
Sbjct: 184 LIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIA 243
Query: 334 H--VIYLSLLFIAS 345
Y +LL +A+
Sbjct: 244 RDKPTYPALLGLAA 257
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 146 (56.5 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 48/174 (27%), Positives = 78/174 (44%)
Query: 169 CIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFL-------LSR 219
C A I E IH SL+HDD+ +DD RRG +++ A+LAGD L ++
Sbjct: 68 CAAAI-ECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAFEIVTE 126
Query: 220 ACVALASLKNXXXXXXXXXXXXXXXX--GETMQMTTSSDQRCSMDYYMQKTYYKTASLIS 277
A + S ++ G+ + + S+D+ + Q KT +LIS
Sbjct: 127 AVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLA-STDKHIDLKALTQLHNMKTGALIS 185
Query: 278 NSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 331
+ + + A + ++ +GLA+Q+ DD+LD T+ LGK SD
Sbjct: 186 CAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSD 239
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 148 (57.2 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 67/271 (24%), Positives = 117/271 (43%)
Query: 72 QSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRF 131
+ ++ + + + DP+ + E S+ ++ V E K+ A Y GKR
Sbjct: 71 EEGGIVSNANFTFEFDPYMMSKAE-SVNKALEEAIPVGEPLKIHEAMRYAILAA--GKRV 127
Query: 132 RPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LD 189
RP +L +A+ L G E+A C E MIH SL+ DD+ +D
Sbjct: 128 RP--ILCLASC-------ELVGGQENAAMPAA-----CAVE---MIHTMSLIKDDLPCMD 170
Query: 190 DADTRRGIGSLNFVMGNKLAVLAGDFLLSRAC--VALASLKN-----XXXXXXXXXXXXX 242
+ D RRG + + V G +A+L+G LLS A + A + +
Sbjct: 171 NDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIGTRG 230
Query: 243 XXXGETMQMTTSS-D-QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDY 300
G+ M +++ D +++ +KTA L+ + A++ G + E +
Sbjct: 231 LVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKF 290
Query: 301 GKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 331
+ +GL +Q++DD+LD T +S LGK + D
Sbjct: 291 ARCIGLLFQVVDDILDETKSSEELGKTAGKD 321
>UNIPROTKB|Q5LX41 [details] [associations]
symbol:ispA "Farnesyl diphosphate synthase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 52/167 (31%), Positives = 76/167 (45%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA---C---- 221
A E +H SL+HDD+ +DD D RRG + + AVLAGD L S A C
Sbjct: 66 ATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELCTRPE 125
Query: 222 VALASLK-NXXXXXXXXXXXXXXXXGETMQMTTSSDQR-CSMDYYMQKTYYKTASLISNS 279
V A + G+ + + + + ++D + KT +LI +
Sbjct: 126 VGTAETRATLALTLAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEWA 185
Query: 280 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGK 326
A A+LAG A+ L Y + LGLA+Q+ DD+LD G + GK
Sbjct: 186 AAAGAVLAG--ADPDPLR-QYARALGLAFQIADDILDVEGDAEKAGK 229
>TIGR_CMR|SPO_0248 [details] [associations]
symbol:SPO_0248 "farnesyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 52/167 (31%), Positives = 76/167 (45%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA---C---- 221
A E +H SL+HDD+ +DD D RRG + + AVLAGD L S A C
Sbjct: 66 ATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELCTRPE 125
Query: 222 VALASLK-NXXXXXXXXXXXXXXXXGETMQMTTSSDQR-CSMDYYMQKTYYKTASLISNS 279
V A + G+ + + + + ++D + KT +LI +
Sbjct: 126 VGTAETRATLALTLAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEWA 185
Query: 280 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGK 326
A A+LAG A+ L Y + LGLA+Q+ DD+LD G + GK
Sbjct: 186 AAAGAVLAG--ADPDPLR-QYARALGLAFQIADDILDVEGDAEKAGK 229
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 143 (55.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 59/215 (27%), Positives = 96/215 (44%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP +L L A L G E+ LA + C E MIH SL+ DD+
Sbjct: 120 GKRVRP-ILCLAACELV---------GGEERLAIQAA----CAVE---MIHTMSLIKDDL 162
Query: 188 --LDDADTRRGIGSLNFVMGNKLAVLAGDFLLS-------RACVALASLKNXXXXXXXXX 238
+D+ D RRG + + V G +A+L+G LL+ A V+ +
Sbjct: 163 PCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRAVKELAKSI 222
Query: 239 XXXXXXXGETMQMTTSS-DQR-CSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAIL 296
G+ +++ +Q ++ +KT SL+ S A++ G T +
Sbjct: 223 GTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEK 282
Query: 297 AFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 331
++ + +GL +Q++DD+LD T +S LGK + D
Sbjct: 283 VRNFARCIGLLFQVVDDILDETKSSEELGKTAGKD 317
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 140 (54.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 51/185 (27%), Positives = 82/185 (44%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALA--- 225
A E IH SL+HDD+ +DD + RRG + + A+L GD L + A LA
Sbjct: 68 ASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGD 127
Query: 226 -SLKNXXXXXXXXXXXXXXXXGETM----QMTTSSDQRC-SMDYYMQKTYYKTASLISNS 279
S + M + +++ R S++ KT +L+ +
Sbjct: 128 LSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCA 187
Query: 280 CKAIALLAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGK--GSLSDIRHVI 336
+ AL AG+ + D Y + +GLA+Q+ DD+LD + +LGK GS ++
Sbjct: 188 IRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKST 247
Query: 337 YLSLL 341
Y +LL
Sbjct: 248 YPALL 252
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 140 (54.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 51/185 (27%), Positives = 82/185 (44%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALA--- 225
A E IH SL+HDD+ +DD + RRG + + A+L GD L + A LA
Sbjct: 68 ASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGD 127
Query: 226 -SLKNXXXXXXXXXXXXXXXXGETM----QMTTSSDQRC-SMDYYMQKTYYKTASLISNS 279
S + M + +++ R S++ KT +L+ +
Sbjct: 128 LSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCA 187
Query: 280 CKAIALLAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGK--GSLSDIRHVI 336
+ AL AG+ + D Y + +GLA+Q+ DD+LD + +LGK GS ++
Sbjct: 188 IRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKST 247
Query: 337 YLSLL 341
Y +LL
Sbjct: 248 YPALL 252
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 138 (53.6 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 60/227 (26%), Positives = 98/227 (43%)
Query: 97 SILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVE 156
S+L K+L S ++ E + + M GK RP ++ A NV V L
Sbjct: 6 SLLVKQLES-ILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILP---- 60
Query: 157 DALATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGD 214
++ E+IHV SL+HDD+ +D+ + RRG S + +A+L GD
Sbjct: 61 -------------VSAAVEIIHVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGD 107
Query: 215 FLLSRACVALASLKNXXXXXXXXXXXXXXXXGET--MQMTTSSDQRCSMDYY-MQKTYY- 270
LL+ A L+++ G +Q + + D +Q +
Sbjct: 108 ALLTLAFEILSTIDESPFIRCCMIKALAKALGYQGMIQGQILDTETIAKDTNDIQAIHVL 167
Query: 271 KTASLISNSCKAIALLAGQTAEVAILAF-DYGKNLGLAYQLIDDVLD 316
KTA S +C+ +L G + + + A +YG NLG A+Q+ DD+ D
Sbjct: 168 KTAQFFSVACELGGIL-GNASNIELNALANYGLNLGHAFQVKDDIAD 213
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 53/174 (30%), Positives = 83/174 (47%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRAC---VALASLKN 229
EMIH ASL+ DD+ +DD RRG + + V G K ++LA + L S A +A SL
Sbjct: 109 EMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGV 168
Query: 230 XXXXXXXXXXXXXXXXG-ETMQMTTSSD---QRCSMDY------YMQKTY-YKTASLISN 278
G E + ++D +R S Y++ + +KTA L+
Sbjct: 169 TSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEA 228
Query: 279 SCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ A++ G + E Y + +GL +Q++DDVLD T +S LGK + D+
Sbjct: 229 AAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDL 282
>UNIPROTKB|I3LJ49 [details] [associations]
symbol:I3LJ49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Ensembl:ENSSSCT00000027318 OMA:NNCISEQ
Uniprot:I3LJ49
Length = 145
Score = 119 (46.9 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 278 NSC--KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGK 326
N+C + +++L V +A+ YGKN+G+A+QLIDDVLDFT S +GK
Sbjct: 9 NNCISEQVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGK 59
>UNIPROTKB|Q2GD75 [details] [associations]
symbol:NSE_0694 "Putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 132 (51.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/151 (31%), Positives = 70/151 (46%)
Query: 170 IAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASL 227
+A EMIH SL+HDD+ LD++D RR + + A+LAGD LL A L S
Sbjct: 68 VAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQML-SR 126
Query: 228 KNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLA 287
G+ + SS + D + K K+ SL + SC ++ LA
Sbjct: 127 YGTPLVQCTSKYVLEMITGQVHDVIGSST--LTADE-INKM--KSGSLFALSCSSVGHLA 181
Query: 288 --GQTAEVAILAFDYGKNLGLAYQLIDDVLD 316
GQ+ + AF Y +G+ +Q +DD+ D
Sbjct: 182 NSGQSELTVLEAFGY--EIGIIFQAVDDIKD 210
>TIGR_CMR|NSE_0694 [details] [associations]
symbol:NSE_0694 "putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 132 (51.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/151 (31%), Positives = 70/151 (46%)
Query: 170 IAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASL 227
+A EMIH SL+HDD+ LD++D RR + + A+LAGD LL A L S
Sbjct: 68 VAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQML-SR 126
Query: 228 KNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLA 287
G+ + SS + D + K K+ SL + SC ++ LA
Sbjct: 127 YGTPLVQCTSKYVLEMITGQVHDVIGSST--LTADE-INKM--KSGSLFALSCSSVGHLA 181
Query: 288 --GQTAEVAILAFDYGKNLGLAYQLIDDVLD 316
GQ+ + AF Y +G+ +Q +DD+ D
Sbjct: 182 NSGQSELTVLEAFGY--EIGIIFQAVDDIKD 210
>UNIPROTKB|G4N8D6 [details] [associations]
symbol:MGG_03432 "Geranylgeranyl pyrophosphate synthetase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000092 InterPro:IPR005630 Pfam:PF00348 Pfam:PF03936
PROSITE:PS00723 GO:GO:0000287 GO:GO:0010333 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CM001234
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
RefSeq:XP_003716502.1 ProteinModelPortal:G4N8D6
EnsemblFungi:MGG_03432T0 GeneID:2676530 KEGG:mgr:MGG_03432
Uniprot:G4N8D6
Length = 711
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 44/168 (26%), Positives = 78/168 (46%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASL 227
+ I + +H +SL+ DD+ D++ RRG + + V G A+ + +L +A A+ SL
Sbjct: 448 ESIKSVINCLHDSSLILDDIEDNSRLRRGFPATHVVYGAGPAINSATYLYVQAVAAINSL 507
Query: 228 KNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKA-IAL 285
N G+++ + +++++C + D Y+ KT + IS + IA
Sbjct: 508 DNREMMDVLLRQLQNLFLGQSLDLHWTANRQCPTRDEYLGMVGQKTGAFISMVAELMIAA 567
Query: 286 LAGQTAEVAILAFDYGKNL-GLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ E AF +L GL YQ+ DD L+ T + KG D+
Sbjct: 568 SNVNSPEKTRAAFAAFSHLSGLYYQVRDDYLNITSAEYADKKGFAEDL 615
>UNIPROTKB|Q97W92 [details] [associations]
symbol:gdS-2 "Hexaprenyl pyrophosphate synthase"
species:273057 "Sulfolobus solfataricus P2" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IDA] [GO:0052922 "hexaprenyl
diphosphate synthase (geranylgeranyl-diphosphate specific)
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 EMBL:AE006641
GenomeReviews:AE006641_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 PIR:A99405 RefSeq:NP_343706.1
PDB:2AZJ PDB:2AZK PDBsum:2AZJ PDBsum:2AZK ProteinModelPortal:Q97W92
SMR:Q97W92 GeneID:1453823 KEGG:sso:SSO2345 HOGENOM:HOG000232204
OMA:KDTAVGA ProtClustDB:CLSK803315 BioCyc:MetaCyc:MONOMER-15679
EvolutionaryTrace:Q97W92 GO:GO:0052922 Uniprot:Q97W92
Length = 281
Score = 121 (47.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 39/143 (27%), Positives = 61/143 (42%)
Query: 175 EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXXXX 234
E++H ASL DD++D TRRG + V GN+ + ++L+ A + +
Sbjct: 71 EILHSASLALDDIVDLDATRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGDDALN 130
Query: 235 XXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVA 294
G M +SD Y++ KT SL S ++ A +
Sbjct: 131 TSIELWKDTSVGALRDMYDNSD-------YIRTIELKTGSLFKLST-VLSAYASKHYNTK 182
Query: 295 ILAFDYGKNLGLAYQLIDDVLDF 317
D GK LG+ YQ+IDD +D+
Sbjct: 183 QQMLDVGKYLGIIYQVIDDFVDY 205
Score = 47 (21.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 114 LASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATE-LRTRQQCIAE 172
L + Y K +GKRFR T+ + AL + D ALA E L + + +
Sbjct: 30 LVDISSYILK---DGKRFRGTLNMFFTVALG----GDIKDSYGGALAIEILHSASLALDD 82
Query: 173 ITEM 176
I ++
Sbjct: 83 IVDL 86
>ASPGD|ASPL0000062493 [details] [associations]
symbol:AN0654 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA] [GO:0016114
"terpenoid biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:BN001308 GO:GO:0016740
EMBL:AACD01000010 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 KO:K00804 OrthoDB:EOG4QVGMM
RefSeq:XP_658258.1 ProteinModelPortal:Q5BFM6 SMR:Q5BFM6
STRING:Q5BFM6 EnsemblFungi:CADANIAT00002021 GeneID:2876433
KEGG:ani:AN0654.2 OMA:ICDDYLN Uniprot:Q5BFM6
Length = 396
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 41/164 (25%), Positives = 70/164 (42%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
I ++ M+H ASLL DDV D++ RRGI + + G + + +++ A + LK+
Sbjct: 120 ITKVVAMLHTASLLIDDVEDNSLLRRGIPVAHSIYGTAQTINSANYVYFLALQEVQKLKS 179
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIALLAG 288
G+ M + C S D Y++ KT L + K + +
Sbjct: 180 PAAIDIYVQELLNLHRGQGMDLFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVKLMQAESS 239
Query: 289 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ L LGL +Q+ DD L+ + T+ + KG D+
Sbjct: 240 TGKDCVALV----NVLGLVFQICDDYLNLSDTTYTQNKGLCEDL 279
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 130 (50.8 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 42/150 (28%), Positives = 68/150 (45%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXX 232
EM+H ASL+HDD+ +DD RRG S + V G+ +A+LAGD L A + S
Sbjct: 117 EMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDL 176
Query: 233 XXXXXXXXXXXXXGETMQMT-TSSDQRCSMD---YYMQKTYYKTASLISNSCKAIA--LL 286
T+ T ++ Q ++ + + K + C A+ LL
Sbjct: 177 VPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGE-CSAVCGGLL 235
Query: 287 AGQTAEVAILAFDYGKNLGLAYQLIDDVLD 316
G T + YG+ +G+ YQ++DD+ +
Sbjct: 236 GGATEDELQSLRRYGRAVGMLYQVVDDITE 265
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 130 (50.8 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 44/171 (25%), Positives = 75/171 (43%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALAS------ 226
EM+H +SL+ DD+ +D+ RRG + + V G +A+LA L++ A S
Sbjct: 120 EMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADV 179
Query: 227 -----LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCK 281
LK + D +++ +KTA+L+ +
Sbjct: 180 PPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAV 239
Query: 282 AIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
A++ G + E Y + +GL +Q++DDVLD T +S LGK + D+
Sbjct: 240 MGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDL 290
>POMBASE|SPAC19G12.12 [details] [associations]
symbol:dlp1 "decaprenyl diphosphate synthase subunit 2
Dlp1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0070219 "cellular
sulfide ion homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IDA]
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
PomBase:SPAC19G12.12 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 GO:GO:0016209 GO:GO:0019646 GO:GO:0070219
GO:GO:0006119 GO:GO:0019418 GO:GO:0006744 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AB118853
PIR:T37999 RefSeq:NP_594427.1 ProteinModelPortal:O13851
EnsemblFungi:SPAC19G12.12.1 GeneID:2542608 KEGG:spo:SPAC19G12.12
OrthoDB:EOG4D82GS NextBio:20803657 GO:GO:0032476 Uniprot:O13851
Length = 294
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 157 DALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFL 216
D + +L R + +A +TE+IH A+++H ++ ++ + KLA L GD+L
Sbjct: 104 DPPSQQLFQRYKQLARVTELIHAANIIHINIGEEQSNEQ----------IKLATLVGDYL 153
Query: 217 LSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYY-KTASL 275
L +A V LA L+N G S Q S+ ++T ++A +
Sbjct: 154 LGKASVDLAHLENNAITEIMASVIANLVEGHF-----GSRQNGSVGLSNERTILLQSAFM 208
Query: 276 ISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQL 310
+ +C ++L + + F+YGK LGL+ QL
Sbjct: 209 PAKACLCASILNNSSQYINDACFNYGKFLGLSLQL 243
>UNIPROTKB|Q83C74 [details] [associations]
symbol:CBU_1255 "Dimethylallyltransferase" species:227377
"Coxiella burnetii RSA 493" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
KO:K00795 RefSeq:NP_820249.1 ProteinModelPortal:Q83C74
GeneID:1209160 KEGG:cbu:CBU_1255 PATRIC:17931243 OMA:MACAVEC
ProtClustDB:CLSK914646 BioCyc:CBUR227377:GJ7S-1240-MONOMER
Uniprot:Q83C74
Length = 267
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 42/148 (28%), Positives = 62/148 (41%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXX 232
E++H SL+HDD+ +DD D RRG S + A+L GD L A LA KN
Sbjct: 71 ELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDKNIRL 130
Query: 233 XXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTY-YKTASLISNSCKAIALLAGQTA 291
Q+ + + ++ + KT +L S + + AL AG
Sbjct: 131 INVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLD 190
Query: 292 EVAILAF-DYGKNLGLAYQLIDDVLDFT 318
E + G +GL +Q DD+ D T
Sbjct: 191 EKRLQKLRKLGATVGLIFQWQDDLADQT 218
>TIGR_CMR|CBU_1255 [details] [associations]
symbol:CBU_1255 "geranyltranstransferase, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 KO:K00795 RefSeq:NP_820249.1
ProteinModelPortal:Q83C74 GeneID:1209160 KEGG:cbu:CBU_1255
PATRIC:17931243 OMA:MACAVEC ProtClustDB:CLSK914646
BioCyc:CBUR227377:GJ7S-1240-MONOMER Uniprot:Q83C74
Length = 267
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 42/148 (28%), Positives = 62/148 (41%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNXXX 232
E++H SL+HDD+ +DD D RRG S + A+L GD L A LA KN
Sbjct: 71 ELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDKNIRL 130
Query: 233 XXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTY-YKTASLISNSCKAIALLAGQTA 291
Q+ + + ++ + KT +L S + + AL AG
Sbjct: 131 INVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLD 190
Query: 292 EVAILAF-DYGKNLGLAYQLIDDVLDFT 318
E + G +GL +Q DD+ D T
Sbjct: 191 EKRLQKLRKLGATVGLIFQWQDDLADQT 218
>UNIPROTKB|G4NEM8 [details] [associations]
symbol:MGG_00758 "Geranylgeranyl pyrophosphate synthase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CM001235 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00804
RefSeq:XP_003718242.1 ProteinModelPortal:G4NEM8 SMR:G4NEM8
EnsemblFungi:MGG_00758T0 GeneID:2674748 KEGG:mgr:MGG_00758
Uniprot:G4NEM8
Length = 412
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 41/167 (24%), Positives = 66/167 (39%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASL 227
+ I + M+H ASLL DDV D++ RRG+ + + G + + +++ A L L
Sbjct: 161 ELITHVVGMLHTASLLVDDVEDNSSLRRGLPVAHSIFGVPQTINSANYIYFAALQELKKL 220
Query: 228 KNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIALL 286
N G+ M + C + D Y++ KT L K +
Sbjct: 221 SNPEAVSIFAEELIHLHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKLMQAE 280
Query: 287 AGQTAEVAILAFDYGKNL-GLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ + LA NL GL +Q+ DD + S KG D+
Sbjct: 281 SAFPTDCIPLA-----NLIGLIFQIRDDYQNLFSREYSNNKGMCEDL 322
>UNIPROTKB|Q9P885 [details] [associations]
symbol:carG "Geranylgeranyl pyrophosphate synthase"
species:29924 "Mucor circinelloides f. lusitanicus" [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0016117
"carotenoid biosynthetic process" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 EMBL:AJ276129 ProteinModelPortal:Q9P885 SMR:Q9P885
Uniprot:Q9P885
Length = 303
Score = 113 (44.8 bits), Expect = 0.00057, P = 0.00057
Identities = 39/165 (23%), Positives = 74/165 (44%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKN 229
I +I M+H ASL+ DDV DD+D RRG+ + + G + ++++ A + L
Sbjct: 54 INKIIGMLHNASLMIDDVQDDSDLRRGVPVAHHIYGVPQTINTANYVIFLALQEVMKLNI 113
Query: 230 XXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIALLAG 288
G+ +++ C + + Y+ KT+ L+ A+ L+
Sbjct: 114 PSMMQVCTEELINLHRGQGIELYWRDSLTCPTEEEYIDMVNNKTSGLLR---LAVRLM-- 168
Query: 289 QTAEVAILAFDYGKNL-GLAYQLIDDVLDFTGTSASLGKGSLSDI 332
Q A + + + N+ G+ +Q+ DD ++ TS + KG D+
Sbjct: 169 QAASESDIDYTPLVNIIGIHFQVRDDYMNLQSTSYTNNKGFCEDL 213
>UNIPROTKB|P24322 [details] [associations]
symbol:al-3 "Geranylgeranyl pyrophosphate synthase"
species:367110 "Neurospora crassa OR74A" [GO:0004311
"farnesyltranstransferase activity" evidence=ISS] [GO:0006720
"isoprenoid metabolic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 HOGENOM:HOG000169461 KO:K00804
GO:GO:0006720 EMBL:U20940 EMBL:BX294018 EMBL:AABX02000014
EMBL:S74011 PIR:S15662 RefSeq:XP_960695.2 ProteinModelPortal:P24322
SMR:P24322 STRING:P24322 EnsemblFungi:EFNCRT00000004018
GeneID:3876842 KEGG:ncr:NCU01427 OMA:VAYMEST OrthoDB:EOG4QVGMM
Uniprot:P24322
Length = 433
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 38/166 (22%), Positives = 64/166 (38%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASL 227
+ I ++ M+H ASLL DDV D++ RRG + + G + +++ A L L
Sbjct: 169 EVITKVISMLHTASLLVDDVEDNSVLRRGFPVAHSIFGIPQTINTSNYVYFYALQELQKL 228
Query: 228 KNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIALL 286
KN G+ M + C + D Y++ KT L K +
Sbjct: 229 KNPKAVSIFSEELLNLHRGQGMDLFWRDTLTCPTEDDYLEMVSNKTGGLFRLGIKLMQAE 288
Query: 287 AGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 332
+ + L +GL +Q+ DD + + KG D+
Sbjct: 289 SRSPVDCVPLV----NIIGLIFQIADDYHNLWNREYTANKGMCEDL 330
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 348 317 0.00083 116 3 11 22 0.49 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 99
No. of states in DFA: 602 (64 KB)
Total size of DFA: 196 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.98u 0.09s 24.07t Elapsed: 00:00:05
Total cpu time: 24.00u 0.10s 24.10t Elapsed: 00:00:05
Start: Fri May 10 14:01:07 2013 End: Fri May 10 14:01:12 2013