Your job contains 1 sequence.
>018981
MFAMNPQPLQARPYIDTEEHDVAQTPIPIQNGSKQGDRYDEPEEVEDEAGASSVNRKSND
RGGSSVQSSTSTRTSELTVAYEGEVYVFPAVTPHKVQALLLLLGECDIPSTVPSSAFAQP
QNIMSGGSASNGSKLSQRIASLVRFREKRKERSFEKKIRYSCRKEVAQRMQRKNGQFTSS
KATFNIASANSNPSNGSAPPESVSRICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWAN
KGTLRDLTKGARNICFEQHELETSSDIKPATTEAENSYANQDEQGSPHETKPAPLDPQNH
SMRSNEQDLQEAMDELANASGSDFEIPSNFDEQVDVDDSNLGTDWLDT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018981
(348 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006360 - symbol:ZML1 "ZIM-like 1" species:3... 401 1.7e-40 2
TAIR|locus:2017582 - symbol:ZML2 "ZIM-LIKE 2" species:370... 385 1.2e-35 1
TAIR|locus:2076191 - symbol:GATA1 "GATA transcription fac... 134 1.6e-06 1
DICTYBASE|DDB_G0277147 - symbol:stkA "GATA zinc finger do... 134 1.2e-05 1
TAIR|locus:2155919 - symbol:GATA16 "GATA transcription fa... 108 1.3e-05 1
DICTYBASE|DDB_G0285139 - symbol:gtaL "GATA zinc finger do... 123 0.00013 1
DICTYBASE|DDB_G0270756 - symbol:gtaG "GATA zinc finger do... 124 0.00018 1
DICTYBASE|DDB_G0295707 - symbol:gtaP "GATA zinc finger do... 121 0.00025 1
TAIR|locus:2139594 - symbol:GATA3 "GATA transcription fac... 114 0.00032 1
TAIR|locus:504955441 - symbol:AT4G16141 species:3702 "Ara... 109 0.00048 1
DICTYBASE|DDB_G0267640 - symbol:gtaE "GATA zinc finger do... 119 0.00062 1
TAIR|locus:2103346 - symbol:GATA4 "GATA transcription fac... 110 0.00068 1
TAIR|locus:2148558 - symbol:GATA23 "GATA transcription fa... 92 0.00071 1
DICTYBASE|DDB_G0281829 - symbol:gtaJ "GATA zinc finger do... 117 0.00072 1
>TAIR|locus:505006360 [details] [associations]
symbol:ZML1 "ZIM-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000679 InterPro:IPR010402
InterPro:IPR013088 InterPro:IPR018467 Pfam:PF00320 Pfam:PF09425
PROSITE:PS00344 PROSITE:PS50114 PROSITE:PS51017 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AB023045
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:AB119060 EMBL:AY042817 EMBL:AY064628
EMBL:AY085109 EMBL:AK118169 IPI:IPI00528960 IPI:IPI00530061
RefSeq:NP_566676.1 RefSeq:NP_850618.1 UniGene:At.20286
ProteinModelPortal:Q8GXL7 SMR:Q8GXL7 IntAct:Q8GXL7
EnsemblPlants:AT3G21175.1 GeneID:821670 KEGG:ath:AT3G21175
GeneFarm:3917 TAIR:At3g21175 eggNOG:NOG303027 HOGENOM:HOG000238783
InParanoid:Q8GXL7 OMA:NGRMHIG PhylomeDB:Q8GXL7
ProtClustDB:CLSN2688624 Genevestigator:Q8GXL7 GermOnline:AT3G21175
InterPro:IPR010399 Pfam:PF06200 SMART:SM00979 PROSITE:PS51320
Uniprot:Q8GXL7
Length = 297
Score = 401 (146.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 89/184 (48%), Positives = 114/184 (61%)
Query: 76 ELTVAYEGEVYVFPAVTPHKVQALLLLLGECDIPSTVPSSAFAQPQNIMSGGSASNGSKL 135
+LT++++G+VYVF V+P KVQA+LLLLG ++P T+P++ + QN G + +L
Sbjct: 79 QLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRL 138
Query: 136 S--QRIASLVXXXXXXXXXXXXXXIRYSCRKEVAQRMQRKNGQFTSSKATFNIXXXXXXX 193
S QR+ASL+ IRY+ RKEVA RMQRK GQFTS+K++ N
Sbjct: 139 SVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSS-NDDSGSTGS 197
Query: 194 XXXXXXXXXVSR--------ICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLR 245
V +C+HCG SEK TP MRRGP GPRTLCNACGLMWANKGTLR
Sbjct: 198 DWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLR 257
Query: 246 DLTK 249
DL+K
Sbjct: 258 DLSK 261
Score = 46 (21.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 292 PAPLDPQNHSMRSNEQDLQEAMDELANASG 321
P P PQ+ S+ NE EA D++ +G
Sbjct: 263 PPPQTPQHLSLNKNEDANLEA-DQMMEVTG 291
>TAIR|locus:2017582 [details] [associations]
symbol:ZML2 "ZIM-LIKE 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000679 InterPro:IPR010402
InterPro:IPR013088 Pfam:PF00320 Pfam:PF06203 PROSITE:PS00344
PROSITE:PS50114 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 EMBL:AC025294
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:AC024261 eggNOG:NOG303027 HOGENOM:HOG000238783
ProtClustDB:CLSN2688624 InterPro:IPR010399 Pfam:PF06200
PROSITE:PS51320 EMBL:AB119061 EMBL:AY045906 EMBL:AY150395
IPI:IPI00526986 PIR:F96554 RefSeq:NP_564593.1 RefSeq:NP_974002.1
UniGene:At.26180 UniGene:At.37784 ProteinModelPortal:Q8H1G0
SMR:Q8H1G0 IntAct:Q8H1G0 PaxDb:Q8H1G0 EnsemblPlants:AT1G51600.1
EnsemblPlants:AT1G51600.2 GeneID:841585 KEGG:ath:AT1G51600
GeneFarm:3915 TAIR:At1g51600 InParanoid:Q8H1G0 OMA:NNDEAAS
PhylomeDB:Q8H1G0 Genevestigator:Q8H1G0 GermOnline:AT1G51600
Uniprot:Q8H1G0
Length = 302
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 91/208 (43%), Positives = 115/208 (55%)
Query: 76 ELTVAYEGEVYVFPAVTPHKVQALLLLLGECDIPSTVPSSAFAQPQN--IMSGGSASNGS 133
+LT++++G+VYVF +V P KVQA+LLLLG ++P P + QN + S
Sbjct: 83 QLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRF 142
Query: 134 KLSQRIASLVXXXXXXXXXXXXXXIRYSCRKEVAQRMQRKNGQFTSSKATFNIXXXXXXX 193
+ QR+ASLV IRY+ RKEVA RMQR GQFTS+K+ +
Sbjct: 143 SIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSS 202
Query: 194 XXXXXXXXXVSR-------ICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRD 246
S C+HCGI EK TP MRRGPAGPRTLCNACGLMWANKG RD
Sbjct: 203 WGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRD 262
Query: 247 LTKG----ARNICFEQHE---LETSSDI 267
L+K A+N+ ++E LET I
Sbjct: 263 LSKASPQTAQNLPLNKNEDANLETDHQI 290
>TAIR|locus:2076191 [details] [associations]
symbol:GATA1 "GATA transcription factor 1" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0007623 "circadian rhythm" evidence=IEP]
InterPro:IPR000679 InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344
PROSITE:PS50114 SMART:SM00401 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0007623 GO:GO:0043565
GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
GO:GO:0044212 EMBL:AP001297 HOGENOM:HOG000238267 EMBL:Y13648
EMBL:AY087597 IPI:IPI00531604 PIR:T52103 RefSeq:NP_189047.1
UniGene:At.24370 ProteinModelPortal:Q8LAU9 SMR:Q8LAU9 STRING:Q8LAU9
EnsemblPlants:AT3G24050.1 GeneID:821990 KEGG:ath:AT3G24050
GeneFarm:3839 TAIR:At3g24050 eggNOG:NOG284625 InParanoid:Q8LAU9
OMA:MEMESFM PhylomeDB:Q8LAU9 ProtClustDB:CLSN2713932
Genevestigator:Q8LAU9 GermOnline:AT3G24050 Uniprot:Q8LAU9
Length = 274
Score = 134 (52.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/83 (42%), Positives = 46/83 (55%)
Query: 203 VSRICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRDLTKGARNICFEQHELE 262
+ R CQHCG +EK TP R GPAGP+TLCNACG+ + + G L + A + F EL
Sbjct: 192 MGRKCQHCG-AEK-TPQWRAGPAGPKTLCNACGVRYKS-GRLVPEYRPANSPTFTA-ELH 247
Query: 263 TSSDIKPATTEAENSYANQDEQG 285
++S K E Y + D G
Sbjct: 248 SNSHRK--IVEMRKQYQSGDGDG 268
>DICTYBASE|DDB_G0277147 [details] [associations]
symbol:stkA "GATA zinc finger domain-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000679
InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344 PROSITE:PS50114
SMART:SM00401 dictyBase:DDB_G0277147 GO:GO:0005634 GO:GO:0045595
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GenomeReviews:CM000151_GR GO:GO:0003700 GO:GO:0006351
EMBL:AAFI02000019 eggNOG:NOG239843 EMBL:U68754 RefSeq:XP_642681.1
HSSP:P17679 ProteinModelPortal:Q550D5 STRING:Q550D5
EnsemblProtists:DDB0185187 GeneID:8620870 KEGG:ddi:DDB_G0277147
OMA:QQTINQH Uniprot:Q550D5
Length = 872
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 205 RICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRD-LTKGARNICFEQHELET 263
R C+ CG S+ TP RRGP+G +LCNACG+ W KG +D + K + Q +
Sbjct: 292 RSCEFCGSSQ--TPTWRRGPSGKGSLCNACGIKWRLKG--KDGIFKPS------QKQQNR 341
Query: 264 SSDIKPATTEAENSYANQDEQGSPHETKPAPLDPQNHSMRSNEQ 307
I A + + NQ +Q P + + P PQ + + N+Q
Sbjct: 342 QKPIMSAQKQPKQQQ-NQPQQQQPQQPQQ-PQQPQQQNQQQNQQ 383
>TAIR|locus:2155919 [details] [associations]
symbol:GATA16 "GATA transcription factor 16" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000679 InterPro:IPR013088 Pfam:PF00320
PROSITE:PS00344 PROSITE:PS50114 SMART:SM00401 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
EMBL:AB016872 eggNOG:NOG70483 HOGENOM:HOG000237836 EMBL:BT029338
IPI:IPI00537074 RefSeq:NP_199741.1 UniGene:At.55451
ProteinModelPortal:Q9FJ10 SMR:Q9FJ10 PaxDb:Q9FJ10 PRIDE:Q9FJ10
EnsemblPlants:AT5G49300.1 GeneID:834990 KEGG:ath:AT5G49300
GeneFarm:3913 TAIR:At5g49300 InParanoid:Q9FJ10 OMA:ACTECHT
PhylomeDB:Q9FJ10 ProtClustDB:CLSN2916480 Genevestigator:Q9FJ10
Uniprot:Q9FJ10
Length = 139
Score = 108 (43.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/93 (32%), Positives = 46/93 (49%)
Query: 205 RICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANK---GT-----LRDLTKGARNICF 256
+ C CG S+ TP R GP GP++LCNACG+ K GT L+ + G N F
Sbjct: 36 KTCADCGTSK--TPLWRGGPVGPKSLCNACGIRNRKKRRGGTEDNKKLKKSSSGGGNRKF 93
Query: 257 EQHELETSSDI---KPATTEAENSYANQDEQGS 286
+ ++ D+ K +T E + ++EQ +
Sbjct: 94 GESLKQSLMDLGIRKRSTVEKQRQKLGEEEQAA 126
>DICTYBASE|DDB_G0285139 [details] [associations]
symbol:gtaL "GATA zinc finger domain-containing
protein 12" species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000679
InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344 PROSITE:PS50114
SMART:SM00401 dictyBase:DDB_G0285139 GenomeReviews:CM000153_GR
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0003700 eggNOG:COG5641 EMBL:AAFI02000074 HSSP:P17678
RefSeq:XP_639891.1 ProteinModelPortal:Q54NM5
EnsemblProtists:DDB0220466 GeneID:8624962 KEGG:ddi:DDB_G0285139
OMA:LTENMIR Uniprot:Q54NM5
Length = 640
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 39/143 (27%), Positives = 66/143 (46%)
Query: 203 VSRICQHCGISEKLTPAMRRGPAGPRTLCNACGLMW---------ANKGTLRDLTKGARN 253
+SR+C +C S+ TP RRGP G +TLCNACG+ + +N + R+ +
Sbjct: 502 ISRVCVNCKTSD--TPEWRRGPQGAKTLCNACGIRYRLQQQQVPQSNLNSPRE-SYAVIP 558
Query: 254 ICFEQHELETS----SDIKPATTEAENSYANQDEQGSPHETKPAPLDPQNHSMRSNEQDL 309
C E + +TS ++I +TT + Q +Q P + P P+ + ++Q L
Sbjct: 559 TCDENIKQQTSQNSTTNINSSTTTTTATIQQQQQQNIPQQF-PQPIQSPLKMLNIDQQIL 617
Query: 310 QEAMDELANAS-GSDFEIPSNFD 331
+ N DF + +F+
Sbjct: 618 NSYENNFKNQFIEKDFLLMDSFE 640
>DICTYBASE|DDB_G0270756 [details] [associations]
symbol:gtaG "GATA zinc finger domain-containing
protein 7" species:44689 "Dictyostelium discoideum" [GO:0030587
"sorocarp development" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000679
InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344 PROSITE:PS50114
SMART:SM00401 dictyBase:DDB_G0270756 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0030587 eggNOG:COG5641
HSSP:P17679 RefSeq:XP_646632.1 ProteinModelPortal:Q55C49
EnsemblProtists:DDB0220467 GeneID:8617604 KEGG:ddi:DDB_G0270756
OMA:RPANIDK Uniprot:Q55C49
Length = 1006
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 36/127 (28%), Positives = 56/127 (44%)
Query: 207 CQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKG-----TLRDLTKGARNICFEQHEL 261
C +CG K TP RRGP+GP TLCNACGL +A K L L + + + + +
Sbjct: 842 CHNCGT--KNTPEWRRGPSGPATLCNACGLAYAKKQREEETNLHKLLLHSNSYSYHRGNM 899
Query: 262 ETSSDIKPATTEAENSYANQDEQGSPHETKPAPLDPQNHSMRSNEQDLQEAMDELANASG 321
S + P+ N+ AN +P+ + S S+ + ++ S
Sbjct: 900 -LESYVTPSLLPLFNTAANVPYLNTPNNAS------SSSSSSSSSSSSSSSSSSTSSYSS 952
Query: 322 SDFEIPS 328
S + IP+
Sbjct: 953 SSYNIPN 959
>DICTYBASE|DDB_G0295707 [details] [associations]
symbol:gtaP "GATA zinc finger domain-containing
protein 16" species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000679
InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344 PROSITE:PS50114
SMART:SM00401 dictyBase:DDB_G0295707 GenomeReviews:CM000155_GR
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0003700 EMBL:AAFI02000179 RefSeq:XP_001733051.1
ProteinModelPortal:B0G188 EnsemblProtists:DDB0252553 GeneID:8628287
KEGG:ddi:DDB_G0295707 Uniprot:B0G188
Length = 695
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 37/135 (27%), Positives = 57/135 (42%)
Query: 207 CQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRDLTKGARNICFEQHELETSSD 266
C CG++ TP RRGP G +TLCNACGL WA K + K + + +
Sbjct: 479 CHTCGVTN--TPEWRRGPNGAKTLCNACGLAWA-KSVKSEKQK---ELLANSTGVNITEP 532
Query: 267 IKPATTEAENSYANQDEQGSPHETKPAPLDP-QNHSMRSNEQDLQEAMDELANASGSDFE 325
K + E+S N + S K D N++ +N+ D N+S S
Sbjct: 533 KKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDD--NGYPSSPNSSNSTSP 590
Query: 326 IPSNFDEQVDVDDSN 340
N + + +++N
Sbjct: 591 SSHNINNNNNNNNNN 605
>TAIR|locus:2139594 [details] [associations]
symbol:GATA3 "GATA transcription factor 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0007623 "circadian rhythm" evidence=IEP] InterPro:IPR000679
InterPro:IPR013088 InterPro:IPR016679 Pfam:PF00320
PIRSF:PIRSF016992 PROSITE:PS00344 PROSITE:PS50114 SMART:SM00401
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0046872 GO:GO:0007623 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351 EMBL:AL161586
EMBL:AL023094 eggNOG:NOG70483 HOGENOM:HOG000238267 EMBL:Y13650
EMBL:AY099790 EMBL:AY128907 IPI:IPI00520450 PIR:H85408 PIR:T05288
RefSeq:NP_001031789.1 RefSeq:NP_195194.1 UniGene:At.24640
UniGene:At.65454 UniGene:At.70827 ProteinModelPortal:Q8L4M6
SMR:Q8L4M6 EnsemblPlants:AT4G34680.1 EnsemblPlants:AT4G34680.2
GeneID:829620 KEGG:ath:AT4G34680 GeneFarm:3903 TAIR:At4g34680
InParanoid:Q8L4M6 OMA:WTEARAL PhylomeDB:Q8L4M6
ProtClustDB:CLSN2685915 Genevestigator:Q8L4M6 GermOnline:AT4G34680
Uniprot:Q8L4M6
Length = 269
Score = 114 (45.2 bits), Expect = 0.00032, P = 0.00032
Identities = 32/91 (35%), Positives = 43/91 (47%)
Query: 205 RICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRDLTKGARNICFEQHELETS 264
R C HCG + TP R GP GP+TLCNACG+ + + G L + A + F E
Sbjct: 180 RRCSHCGTNN--TPQWRTGPVGPKTLCNACGVRFKS-GRLCPEYRPADSPTFSN---EIH 233
Query: 265 SDIKPATTEAENSYANQDEQGSPHETKPAPL 295
S++ E S +E G TK P+
Sbjct: 234 SNLHRKVLELRKSKELGEETGEA-STKSDPV 263
>TAIR|locus:504955441 [details] [associations]
symbol:AT4G16141 species:3702 "Arabidopsis thaliana"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000679 InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344
PROSITE:PS50114 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
HOGENOM:HOG000237836 ProtClustDB:CLSN2684177 HSSP:P17679
EMBL:AK119021 IPI:IPI00534756 RefSeq:NP_680707.4 UniGene:At.44271
ProteinModelPortal:Q8GW81 SMR:Q8GW81 EnsemblPlants:AT4G16141.1
GeneID:827301 KEGG:ath:AT4G16141 TAIR:At4g16141 eggNOG:NOG326708
InParanoid:Q8GW81 OMA:DVDNGNC PhylomeDB:Q8GW81
Genevestigator:Q8GW81 Uniprot:Q8GW81
Length = 197
Score = 109 (43.4 bits), Expect = 0.00048, P = 0.00048
Identities = 34/115 (29%), Positives = 50/115 (43%)
Query: 205 RICQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANK-----GTLRD----LTKGARNIC 255
+ C CG S TP R GPAGP++LCNACG+ K G +D +K N+
Sbjct: 37 KTCVDCGTSR--TPLWRGGPAGPKSLCNACGIKSRKKRQAALGIRQDDIKIKSKSNNNLG 94
Query: 256 FEQHELETSSDIKPATTEAENSYAN--QDEQGSPHETK-PAPLDPQNHSMRSNEQ 307
E ++T +P + + +G P K DP+N S +N +
Sbjct: 95 LESRNVKTGKG-EPVNVKIAKCEPGIVKIAKGEPGNVKNKIKRDPENSSSSNNNK 148
>DICTYBASE|DDB_G0267640 [details] [associations]
symbol:gtaE "GATA zinc finger domain-containing
protein 5" species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000679
InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344 PROSITE:PS50114
SMART:SM00401 dictyBase:DDB_G0267640 GenomeReviews:CM000150_GR
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
EMBL:AAFI02000003 GO:GO:0003700 eggNOG:NOG70483 RefSeq:XP_647184.1
ProteinModelPortal:Q55GK0 EnsemblProtists:DDB0220471 GeneID:8615988
KEGG:ddi:DDB_G0267640 Uniprot:Q55GK0
Length = 952
Score = 119 (46.9 bits), Expect = 0.00062, P = 0.00062
Identities = 33/84 (39%), Positives = 41/84 (48%)
Query: 207 CQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRDLTKGARNICFEQHELETSSD 266
C C S TP R+GP GP TLCNACGL +A K + LTK NI F Q +++
Sbjct: 241 CYQCNTSN--TPEWRKGPEGPATLCNACGLAYAKK---QKLTKN--NIKFNQ-STNVNNN 292
Query: 267 IKPATTEAENSYANQDEQGSPHET 290
T+ NQ G P+ T
Sbjct: 293 TNNTITQLNQQINNQ---GLPNLT 313
>TAIR|locus:2103346 [details] [associations]
symbol:GATA4 "GATA transcription factor 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009416 "response to light stimulus"
evidence=IEP] InterPro:IPR000679 InterPro:IPR013088
InterPro:IPR016679 Pfam:PF00320 PIRSF:PIRSF016992 PROSITE:PS00344
PROSITE:PS50114 SMART:SM00401 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
GO:GO:0009416 EMBL:AL138646 HOGENOM:HOG000238267
ProtClustDB:CLSN2683327 EMBL:Y13651 EMBL:AF378881 EMBL:AY039532
EMBL:AY050476 IPI:IPI00521010 PIR:T47864 RefSeq:NP_191612.1
UniGene:At.20781 ProteinModelPortal:O49743 SMR:O49743 PRIDE:O49743
EnsemblPlants:AT3G60530.1 GeneID:825224 KEGG:ath:AT3G60530
GeneFarm:3882 TAIR:At3g60530 eggNOG:NOG239843 InParanoid:O49743
OMA:ESELCHS PhylomeDB:O49743 Genevestigator:O49743
GermOnline:AT3G60530 Uniprot:O49743
Length = 240
Score = 110 (43.8 bits), Expect = 0.00069, P = 0.00068
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 204 SRICQHCGISEKLTPAMRRGPAGPRTLCNACGLMW 238
+R C HC SEK TP R GP GP+TLCNACG+ +
Sbjct: 157 ARRCTHCA-SEK-TPQWRTGPLGPKTLCNACGVRY 189
>TAIR|locus:2148558 [details] [associations]
symbol:GATA23 "GATA transcription factor 23" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0048527 "lateral root development" evidence=IMP]
InterPro:IPR000679 InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344
PROSITE:PS50114 SMART:SM00401 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
GO:GO:0009416 EMBL:AF007270 HOGENOM:HOG000237836 EMBL:DQ446989
EMBL:DQ653310 EMBL:BT024789 EMBL:AY086778 IPI:IPI00517378
PIR:T01770 RefSeq:NP_198045.1 UniGene:At.30837
ProteinModelPortal:Q8LC59 SMR:Q8LC59 EnsemblPlants:AT5G26930.1
GeneID:832751 KEGG:ath:AT5G26930 GeneFarm:3912 TAIR:At5g26930
eggNOG:NOG243746 InParanoid:Q8LC59 OMA:HGGVAVK PhylomeDB:Q8LC59
ProtClustDB:CLSN2916567 Genevestigator:Q8LC59 Uniprot:Q8LC59
Length = 120
Score = 92 (37.4 bits), Expect = 0.00071, P = 0.00071
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 205 RICQHCGISEKLTPAMRRGPAGPRTLCNACGL 236
R C C ++ TP R GP GP++LCNACG+
Sbjct: 26 RCCSECKTTK--TPMWRGGPTGPKSLCNACGI 55
>DICTYBASE|DDB_G0281829 [details] [associations]
symbol:gtaJ "GATA zinc finger domain-containing
protein 10" species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000679
InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344 PROSITE:PS50114
SMART:SM00401 dictyBase:DDB_G0281829 GenomeReviews:CM000152_GR
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0003700 EMBL:AAFI02000043 eggNOG:NOG275546 HSSP:P17679
RefSeq:XP_640446.1 ProteinModelPortal:Q54TE3
EnsemblProtists:DDB0220473 GeneID:8623259 KEGG:ddi:DDB_G0281829
OMA:VHAEYQQ Uniprot:Q54TE3
Length = 714
Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
Identities = 32/93 (34%), Positives = 48/93 (51%)
Query: 207 CQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTLRDLTKGARNICFEQHELETSSD 266
C +C ++E TP RRGP G TLCNACGL +A K + + E+ ELE +
Sbjct: 631 CHYCEVTE--TPEWRRGPDGDHTLCNACGLHYA---------KSQKKLAREK-ELEKQKE 678
Query: 267 IKPATTEAENSYANQDEQGSPHETKPAPLDPQN 299
++ E EN+ + + ++T AP + QN
Sbjct: 679 LE-REKERENTRKHSIDFMLMNDTSSAPTNSQN 710
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.128 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 348 306 0.00099 115 3 11 23 0.48 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 610 (65 KB)
Total size of DFA: 221 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.87u 0.11s 28.98t Elapsed: 00:00:01
Total cpu time: 28.88u 0.11s 28.99t Elapsed: 00:00:01
Start: Fri May 10 14:04:57 2013 End: Fri May 10 14:04:58 2013