Query 018982
Match_columns 348
No_of_seqs 207 out of 1220
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 09:03:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018982.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018982hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g57a_ d.115.1.2 (A:) 3,4-dih 100.0 3.1E-72 2.3E-76 514.2 19.3 203 106-310 7-209 (209)
2 d1tksa_ d.115.1.2 (A:) 3,4-dih 100.0 1.2E-71 8.4E-76 508.2 17.3 200 107-308 2-202 (202)
3 d1k4ia_ d.115.1.2 (A:) 3,4-dih 100.0 9.4E-71 6.8E-75 506.6 18.2 204 108-313 1-216 (216)
4 d1snna_ d.115.1.2 (A:) 3,4-dih 100.0 8.5E-70 6.2E-74 501.1 16.2 197 109-306 1-219 (219)
5 d1y0na_ d.291.1.1 (A:) Hypothe 61.4 3.9 0.00028 30.1 3.9 36 109-147 38-73 (78)
6 d1lh0a_ c.61.1.1 (A:) Orotate 53.7 12 0.0009 31.4 6.5 61 250-310 132-195 (213)
7 d1v9ca_ c.23.17.1 (A:) Precorr 50.3 17 0.0013 30.7 6.9 129 110-299 50-178 (204)
8 d1k7ja_ d.115.1.1 (A:) Hypothe 45.0 30 0.0022 28.3 7.6 60 109-174 15-79 (206)
9 d1hrua_ d.115.1.1 (A:) Hypothe 35.3 24 0.0017 28.2 5.2 60 109-174 6-70 (186)
10 d1ko7a1 c.98.2.1 (A:1-129) HPr 30.3 17 0.0012 27.4 3.2 70 225-299 41-110 (129)
11 d1j20a1 c.26.2.1 (A:1-165) Arg 27.2 13 0.00098 26.9 2.0 16 281-296 149-164 (165)
12 d1zyma2 c.8.1.2 (A:3-21,A:145- 27.0 9.7 0.00071 29.6 1.2 81 121-202 12-101 (124)
13 d1tifa_ d.15.8.1 (A:) Translat 26.9 17 0.0012 26.2 2.4 31 270-300 14-47 (76)
14 d1vl2a1 c.26.2.1 (A:2-169) Arg 24.0 12 0.00086 27.4 1.1 16 281-296 153-168 (168)
No 1
>d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.1e-72 Score=514.24 Aligned_cols=203 Identities=48% Similarity=0.869 Sum_probs=194.3
Q ss_pred CCcccHHHHHHHHHCCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHHHHhcCCceEeecCHHHHHhcCCCccccCCCCC
Q 018982 106 KGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNE 185 (348)
Q Consensus 106 ~~~~~Ie~Ai~aLr~G~pVvV~Dde~REnEgdLV~aAe~~T~e~vafm~~~a~Glicvalt~~ra~~LgLp~m~~~~~n~ 185 (348)
..|++|++||++||+|+||||+||++||||||||++||.+|++.|+||++|++|++|++|++++|++||||+|+.. |.
T Consensus 7 ~~~~~ie~ai~alk~G~~Viv~Dd~~RE~EgDlv~~Ae~~t~e~i~fm~~~~~GliC~a~~~~~~~~L~Lp~m~~~--~~ 84 (209)
T d1g57a_ 7 TPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NT 84 (209)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CC
T ss_pred CchhhHHHHHHHHHCCCEEEEEECCCCCCcccEEEEHHHCCHHHHHHHHHhCCCCEEEcccHHHHhcCCCCCcccc--cc
Confidence 3478899999999999999999999999999999999999999999999999999999999999999999999987 88
Q ss_pred CCCccceEEEeeccCCCCCCCChHHHHHHHHHHhcCCCCCCCCCCCCCcCccccccCCccccCChhHHHHHHHHHcCCCC
Q 018982 186 EKLCTAFTVSVDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEP 265 (348)
Q Consensus 186 ~~~~taFtVsVDa~~gttTGISA~DRA~TIr~LAdp~s~~~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarLAGL~P 265 (348)
+.++++|+||||+++|++|||||.||+.||+.|+++++.|.||++|||||||++++|||++|+||||||||||+|||+.|
T Consensus 85 ~~~~~~ftvsvd~~~g~tTGISa~dRa~Tir~l~~~~~~~~df~~PGHv~pL~a~~gGv~~R~GHTEaavdL~~lAGl~P 164 (209)
T d1g57a_ 85 SAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKP 164 (209)
T ss_dssp CTTCCCBBSCEEESSSCSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCS
T ss_pred cccCCcceEEEEecCCccccccHHHHHHHHHHhhccCCCHHHhcCCceeceeeeccCCccccchHHHHHHHHHHhcCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEecCCCCcCChhHHHHHHHhCCCceeeHHHHHHHHHHcc
Q 018982 266 VAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRD 310 (348)
Q Consensus 266 aaVi~ell~ddG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~e 310 (348)
++|||||+++||+|++.+++++||++|+||+|+|+|||+||+++|
T Consensus 165 ~avi~Eil~~dG~~~~~~~~~~fA~~~~l~~isi~dli~yr~~~e 209 (209)
T d1g57a_ 165 AGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHE 209 (209)
T ss_dssp CEEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEEHHHHHHHHHHHC
T ss_pred eEEEEEEecCCCcccCHHHHHHHHHHcCCCEEEHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999865
No 2
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]}
Probab=100.00 E-value=1.2e-71 Score=508.19 Aligned_cols=200 Identities=51% Similarity=0.812 Sum_probs=189.9
Q ss_pred CcccHHHHHHHHHCCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHHHHhcCCceEeecCHHHHHhcCCCccccCCCCCC
Q 018982 107 GFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEE 186 (348)
Q Consensus 107 ~~~~Ie~Ai~aLr~G~pVvV~Dde~REnEgdLV~aAe~~T~e~vafm~~~a~Glicvalt~~ra~~LgLp~m~~~~~n~~ 186 (348)
.|++|++||++||+|+||||+||++||||||||++||.+|++.|+||++|++|+||++|++++|++||||+|+.. |.+
T Consensus 2 ~~~~ie~ai~~l~~G~~Viv~Dd~~RE~EgDlv~~Ae~~T~~~i~fm~~~~~Glic~a~~~~~~~~L~L~~m~~~--~~~ 79 (202)
T d1tksa_ 2 IFTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLAN--RSD 79 (202)
T ss_dssp CSCCHHHHHHHHHTTCCEEEESSSCTTCBCEEEEEGGGCCHHHHHHHHHTBCSCCEEEEEHHHHHHTTCCBSCC------
T ss_pred CcccHHHHHHHHHCCCEEEEEeCCCCCccccEEEEHHHCCHHHHHHHHHhCCCCeEEecCHHHHhhhcccccccc--ccC
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999986 788
Q ss_pred CCccceEEEeeccCCCCCCCChHHHHHHHHHHhcCCCCCCCCCCCCCcCccccccCCccccCChhHHHHHHHHHcCCCCc
Q 018982 187 KLCTAFTVSVDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPV 266 (348)
Q Consensus 187 ~~~taFtVsVDa~~gttTGISA~DRA~TIr~LAdp~s~~~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarLAGL~Pa 266 (348)
.++++|+++||++.|++|||||.||+.||+.|++++++|.||++|||||||++++|||++|+||||||||||+||||.|+
T Consensus 80 ~~~t~f~vsvd~~~g~~TGISa~DRa~Tir~la~~~~~~~df~~PGHv~pl~a~~ggvl~R~GHTEasvdL~~lAGl~P~ 159 (202)
T d1tksa_ 80 RHGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPA 159 (202)
T ss_dssp --CCCBBCCEEESTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEEECTTGGGTCCCHHHHHHHHHHHTTSCSB
T ss_pred CCCcccccchhhccCCcccccHHHHHHHHHHHcCCCCCHHHhhcccccceeeeecCCcccCccHHHHHHHHHHhcCCCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEec-CCCCcCChhHHHHHHHhCCCceeeHHHHHHHHHH
Q 018982 267 AVLCEIVD-DDGSMARLPKLRQFAQTENLKIISIADLIRYRRK 308 (348)
Q Consensus 267 aVi~ell~-ddG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~ 308 (348)
+|||||++ +||+|++.+++++||++|+||+|+|+||++||++
T Consensus 160 avi~Eil~d~dG~~~~~~~~~~fA~~~~l~~isi~dli~yr~k 202 (202)
T d1tksa_ 160 GVICELVRDEDGLMMRLDDCIQFGKKHGIKIININQLVEYISK 202 (202)
T ss_dssp EEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEEHHHHHHHHCC
T ss_pred EEEEEEEECCCCCccCHHHHHHHHHHcCCCEEEHHHHHHHHhC
Confidence 99999995 6999999999999999999999999999999963
No 3
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]}
Probab=100.00 E-value=9.4e-71 Score=506.63 Aligned_cols=204 Identities=48% Similarity=0.744 Sum_probs=194.5
Q ss_pred cccHHHHHHHHHCCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHHHHhcCCceEeecCHHHHHhcCCCccccCCCCCCC
Q 018982 108 FASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEK 187 (348)
Q Consensus 108 ~~~Ie~Ai~aLr~G~pVvV~Dde~REnEgdLV~aAe~~T~e~vafm~~~a~Glicvalt~~ra~~LgLp~m~~~~~n~~~ 187 (348)
|++||+||++||+|+||||+||++||||||||++||.+|++.|+||++|++|++|++|++++|++||||+|+.. |.+.
T Consensus 1 f~~ie~ai~~l~~G~~viv~Dd~~REnEgDlv~~Ae~~t~e~i~fm~~~~~Glic~a~~~~~~~~L~Lp~m~~~--~~~~ 78 (216)
T d1k4ia_ 1 FDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTH--NADP 78 (216)
T ss_dssp CCCHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CCCS
T ss_pred CCcHHHHHHHHHCCCeEEEEeCCCCCCcccEEEEhHhCCHHHHHHHHHhCCCCEEEeehHhhhhhccccccccc--cccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999987 7777
Q ss_pred CccceEEEeecc-CCCCCCCChHHHHHHHHHHhcCCCCCCCCCCCCCcCccccccCCccccCChhHHHHHHHHHcCCCCc
Q 018982 188 LCTAFTVSVDAK-YGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPV 266 (348)
Q Consensus 188 ~~taFtVsVDa~-~gttTGISA~DRA~TIr~LAdp~s~~~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarLAGL~Pa 266 (348)
++++|+++|+.+ .|++|||||.|||+|||.|++++++|.||++|||||||++++|||++|+||||||||||+|||+.|+
T Consensus 79 ~~~~~~~sv~~~~~~~~TGISa~DRa~Tir~la~~~~~~~df~~PGHv~pL~a~~gGvl~R~GHTEaavdL~~lAGl~P~ 158 (216)
T d1k4ia_ 79 RGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPV 158 (216)
T ss_dssp SCCCBBCCEEECSTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCCSHHHHHHHHHHHTTCCSB
T ss_pred ccccccceeeeccccccccchHHHHHHHHHHHhcCCCCcceeeccceeeeeeeccCCccCCCChHHHHHHHHHHcCCCCc
Confidence 788887777754 4999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCC-----------CcCChhHHHHHHHhCCCceeeHHHHHHHHHHccccc
Q 018982 267 AVLCEIVDDDG-----------SMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLV 313 (348)
Q Consensus 267 aVi~ell~ddG-----------~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~e~lV 313 (348)
+|||||+|++| +||+++++++||++|+||+|+|+|||+||+++|+.|
T Consensus 159 avi~Eildd~g~~~~~~~~~~g~ma~~~~l~~fA~~h~l~~i~i~dli~yr~~~E~~~ 216 (216)
T d1k4ia_ 159 AVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKL 216 (216)
T ss_dssp EEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEEHHHHHHHHHHHHCCC
T ss_pred EEEEEEecCCCccccccccccccccchHHHHHHHHHcCCcEEEHHHHHHHHHhhccCC
Confidence 99999999866 499999999999999999999999999999988643
No 4
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=8.5e-70 Score=501.13 Aligned_cols=197 Identities=31% Similarity=0.594 Sum_probs=185.6
Q ss_pred ccHHHHHHHHHCCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHHHHhcCCceEeecCHHHHHhcCCCccccCC------
Q 018982 109 ASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHK------ 182 (348)
Q Consensus 109 ~~Ie~Ai~aLr~G~pVvV~Dde~REnEgdLV~aAe~~T~e~vafm~~~a~Glicvalt~~ra~~LgLp~m~~~~------ 182 (348)
++|++||++||+|+||||+||++||||||||++||.+|++.|+||++|++|++|++|++++|++||||+|++..
T Consensus 1 d~ie~ai~~lk~G~~Viv~Dd~~REnEgDlv~~Ae~~t~e~i~fm~~~~~Glic~a~~~~~~~~L~Lp~m~~~~~~~~~~ 80 (219)
T d1snna_ 1 NNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQK 80 (219)
T ss_dssp CHHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHHHHHHTTT
T ss_pred CCHHHHHHHHHCCCEEEEEeCCCCCCcccEEEEhhhCCHHHHHHHHHcCCCCEEecCCHHHHHHcCCccccchhhhhhhc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999998521
Q ss_pred ----------CCCCCCccceEEEeeccCCCCCCCChHHHHHHHHHHhc------CCCCCCCCCCCCCcCccccccCCccc
Q 018982 183 ----------DNEEKLCTAFTVSVDAKYGTTTGVSANDRAKTVLALAC------RDSKPEDFNRPGHIFPLKYREGGVLK 246 (348)
Q Consensus 183 ----------~n~~~~~taFtVsVDa~~gttTGISA~DRA~TIr~LAd------p~s~~~Df~rPGHVfPL~a~~gGvl~ 246 (348)
.+.+..+++|+|||||+ +++|||||.||+.|||.|++ +++.+.||++|||||||++++|||++
T Consensus 81 ~~~~~~~~~~~~~~~~~t~ftvsvd~~-~~~TGISa~DRa~Tir~La~~~~~~~~~~~~~dF~~PGHV~pL~a~~GGvl~ 159 (219)
T d1snna_ 81 FKVLRELYPNDIPYDEKSSFSITINHR-KTFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVKN 159 (219)
T ss_dssp CHHHHHTCCTTCTTSSSCCEEEEEEET-TCSSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTGGGT
T ss_pred cccccccccccCcccCCcceEEEeecc-CCCCCCcHHHHHHHHHHHHhcccccCcccchhhhcCCcceeeeeeecCcccC
Confidence 12345689999999997 57799999999999999999 55668899999999999999999999
Q ss_pred cCChhHHHHHHHHHcCCCCcEEEEEEecCCCCcCChhHHHHHHHhCCCceeeHHHHHHHH
Q 018982 247 RAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYR 306 (348)
Q Consensus 247 R~GhTEAAVdLarLAGL~PaaVi~ell~ddG~mar~~~l~~fA~~h~L~ivsi~DLi~yr 306 (348)
|+||||||||||||||+.|++||||||++||+||+.+++++||++|+||+|+|+||++|+
T Consensus 160 R~GHTEaavdL~~lAGl~P~aVicEil~ddG~~~~~~~~~~fA~~~~l~~isi~dli~y~ 219 (219)
T d1snna_ 160 RQGHTEMTVALAELANLVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINYY 219 (219)
T ss_dssp CCSHHHHHHHHHHHTTSCSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEEHHHHHHHC
T ss_pred CCchHHHHHHHHHHcCCCceEEEEEEecCCCCccCHHHHHHHHHHcCCCEEEHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999984
No 5
>d1y0na_ d.291.1.1 (A:) Hypothetical UPF0270 protein PA3463 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=61.42 E-value=3.9 Score=30.11 Aligned_cols=36 Identities=28% Similarity=0.382 Sum_probs=28.0
Q ss_pred ccHHHHHHHHHCCcEEEEEeCCCCCCceeEEEEcCCCCH
Q 018982 109 ASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTP 147 (348)
Q Consensus 109 ~~Ie~Ai~aLr~G~pVvV~Dde~REnEgdLV~aAe~~T~ 147 (348)
.+|++....|++|+.||++|.+. |..=|++.+.+..
T Consensus 38 ~kv~qv~~qL~~G~~vI~fde~~---Es~~I~~k~~l~~ 73 (78)
T d1y0na_ 38 VRVERARHALRRGEAVILFDPES---QQCQLMLRSEVPA 73 (78)
T ss_dssp HHHHHHHHHHHTTSEEEEECTTT---CCEEEEEGGGSCG
T ss_pred HHHHHHHHHHHcCCEEEEECCCC---CeEeeeeHHHhHH
Confidence 57999999999999999998554 5555667665543
No 6
>d1lh0a_ c.61.1.1 (A:) Orotate PRTase {Salmonella typhimurium [TaxId: 90371]}
Probab=53.71 E-value=12 Score=31.40 Aligned_cols=61 Identities=16% Similarity=0.318 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHcCCCCcEEEEEEecCCCCcCChhHHHHHHHhCCCcee---eHHHHHHHHHHcc
Q 018982 250 HTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKII---SIADLIRYRRKRD 310 (348)
Q Consensus 250 hTEAAVdLarLAGL~PaaVi~ell~ddG~mar~~~l~~fA~~h~L~iv---si~DLi~yr~~~e 310 (348)
-.--+++..+-+|..+++|+|-+--+.|.-.......++.+++|+|++ +++||++|.....
T Consensus 132 S~~eaie~l~~~G~~V~~v~vivDR~e~~~~~~~~~~~~~~~~gi~~~sl~~~~dl~~~l~~~~ 195 (213)
T d1lh0a_ 132 AIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYGCKVISIITLKDLIAYLEEKP 195 (213)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHHHHCG
T ss_pred cHHHHHHHHHHhcccceeEEEEEeecccccchhHHHHHHHHHcCCeEEEEccHHHHHHHHHHcC
Confidence 344678888889999999998775555544556677788899998876 5999998876543
No 7
>d1v9ca_ c.23.17.1 (A:) Precorrin-8x methylmutase {Thermus thermophilus [TaxId: 274]}
Probab=50.28 E-value=17 Score=30.73 Aligned_cols=129 Identities=22% Similarity=0.221 Sum_probs=70.5
Q ss_pred cHHHHHHHHHCCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHHHHhcCCceEeecCHHHHHhcCCCccccCCCCCCCCc
Q 018982 110 SISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLC 189 (348)
Q Consensus 110 ~Ie~Ai~aLr~G~pVvV~Dde~REnEgdLV~aAe~~T~e~vafm~~~a~Glicvalt~~ra~~LgLp~m~~~~~n~~~~~ 189 (348)
.++.++++||+|.+|+. | -. |.+..++... +...+.-..|..-.++..+.-
T Consensus 50 av~ag~~AL~~G~~Iv~-D-v~--------MV~aGI~~~~---l~~~g~~v~c~i~d~~v~~~a---------------- 100 (204)
T d1v9ca_ 50 AVEAGLKAIQAGARILV-D-AR--------MIACGLNPER---LRLFGNEVVELLAHPEVVARA---------------- 100 (204)
T ss_dssp HHHHHHHHHHTTCCEEE-S-CH--------HHHHHSCHHH---HGGGTCCEEEGGGCHHHHHC-----------------
T ss_pred HHHHHHHHHhcCCCEEE-c-cH--------HHHhhhhhhh---HhhcCCceEEEecCcchhhhh----------------
Confidence 59999999999998886 4 22 3333443322 222344444444333332211
Q ss_pred cceEEEeeccCCCCCCCChHHHHHHHHHHhcCCCCCCCCCCCCCcCccccccCCccccCChhHHHHHHHHHcCCCCcEEE
Q 018982 190 TAFTVSVDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVL 269 (348)
Q Consensus 190 taFtVsVDa~~gttTGISA~DRA~TIr~LAdp~s~~~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarLAGL~PaaVi 269 (348)
..+|++ |+.+.-.++.. +...||-|+...--|.-+ ..-++|.+ .|..|+.|+
T Consensus 101 ------------k~~g~T---Rs~aa~~~~~~-----~~~~~gaIvvIGNAPTAL-------~~Lleli~-~g~~PalVI 152 (204)
T d1v9ca_ 101 ------------KATGGT---RAEAAVAYAWE-----KGLLDGAIVGVGNAPTFL-------LALVEAIR-QGARPALVL 152 (204)
T ss_dssp -----------------C---HHHHHHHHHHT-----TTTTSSCEEEESSCTTTT-------HHHHHHHH-TTCCCSEEE
T ss_pred ------------hhccch---HHHHHHHHHhh-----cccCCCcEEEecCCcHHH-------HHHHHHHh-cCCCCcEEE
Confidence 113444 55555444432 234578887776655311 23455555 589999888
Q ss_pred EEEecCCCCcCChhHHHHHHHhCCCceeeH
Q 018982 270 CEIVDDDGSMARLPKLRQFAQTENLKIISI 299 (348)
Q Consensus 270 ~ell~ddG~mar~~~l~~fA~~h~L~ivsi 299 (348)
.-=+.- -...+.++.-.+.++|.|++
T Consensus 153 G~PVGF----VgA~ESK~~L~~~~vP~It~ 178 (204)
T d1v9ca_ 153 GMPVGF----VNVLEAKRALMEAPVPWIVT 178 (204)
T ss_dssp ECCCSS----SSHHHHHHHHTTSSSCEEEE
T ss_pred eCCccc----cCHHHHHHHHHhCCCCEEEE
Confidence 754432 23355566666788998864
No 8
>d1k7ja_ d.115.1.1 (A:) Hypothetical protein YciO {Escherichia coli [TaxId: 562]}
Probab=44.96 E-value=30 Score=28.29 Aligned_cols=60 Identities=20% Similarity=0.324 Sum_probs=45.1
Q ss_pred ccHHHHHHHHHCCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHHHHh-----cCCceEeecCHHHHHhcC
Q 018982 109 ASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRH-----GTGIVCVSMKGEDLERLE 174 (348)
Q Consensus 109 ~~Ie~Ai~aLr~G~pVvV~Dde~REnEgdLV~aAe~~T~e~vafm~~~-----a~Glicvalt~~ra~~Lg 174 (348)
..|++|++.|++|+.|++=-| +...+++...+++.+..+.+. ...++.++-..+.+.++.
T Consensus 15 ~~i~~a~~~L~~G~vv~~PTd------TvYgl~~da~~~~av~~i~~iK~R~~~kpl~vlv~~~~~~~~~~ 79 (206)
T d1k7ja_ 15 RLINQAVEIVRKGGVIVYPTD------SGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYS 79 (206)
T ss_dssp HHHHHHHHHHHTTCCEEEEET------TEEEEEEETTCHHHHHHHHHHHTCCTTCCCEEECSSHHHHHHHB
T ss_pred HHHHHHHHHHHcCCEEEEECC------ceeEEEEeCCChHHHHHHHHhhccccccccccccCCHHHHHHHh
Confidence 459999999999999988654 456778888888888877644 335666666777777764
No 9
>d1hrua_ d.115.1.1 (A:) Hypothetical protein YrdC {Escherichia coli [TaxId: 562]}
Probab=35.31 E-value=24 Score=28.22 Aligned_cols=60 Identities=12% Similarity=0.210 Sum_probs=43.8
Q ss_pred ccHHHHHHHHHCCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHHHHh-----cCCceEeecCHHHHHhcC
Q 018982 109 ASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRH-----GTGIVCVSMKGEDLERLE 174 (348)
Q Consensus 109 ~~Ie~Ai~aLr~G~pVvV~Dde~REnEgdLV~aAe~~T~e~vafm~~~-----a~Glicvalt~~ra~~Lg 174 (348)
+.|++|++.|++|+.|++=-| +...+++..-+++.+..+.+. ...+..++-..+.+..+-
T Consensus 6 d~i~~a~~~L~~G~iv~~PTd------t~Ygl~~~~~~~~av~~i~~~K~R~~~kp~~vlv~~~~~~~~~~ 70 (186)
T d1hrua_ 6 DAIAAAIDVLNEERVIAYPTE------AVFGVGCDPDSETAVMRLLELKQRPVDKGLILIAANYEQLKPYI 70 (186)
T ss_dssp HHHHHHHHHHHTTCCEEEECS------SSEEEEECTTCHHHHHHHHHHHTCCGGGCCEEEESSHHHHGGGC
T ss_pred HHHHHHHHHHHcCCEEEEECC------ceeEEEEeCCChHHHHHHHHhhhhccccccceeeehhhhhhhhc
Confidence 468999999999999988543 346677888888888777643 345666666667666653
No 10
>d1ko7a1 c.98.2.1 (A:1-129) HPr kinase/phoshatase HprK N-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=30.34 E-value=17 Score=27.43 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=40.2
Q ss_pred CCCCCCCCCcCccccccCCccccCChhHHHHHHHHHcCCCCcEEEEEEecCCCCcCChhHHHHHHHhCCCceeeH
Q 018982 225 PEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISI 299 (348)
Q Consensus 225 ~~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarLAGL~PaaVi~ell~ddG~mar~~~l~~fA~~h~L~ivsi 299 (348)
.-++-+|+-+..+.-++-+.+.+....+..--+.++....+++++.. . | ..-.+++.++|+++++|++..
T Consensus 41 ~~~~~~~~~l~i~G~~e~~yl~~~~~~~~~~~i~~l~~~~~~~lIit---~-g-~~~p~~li~~a~~~~iPll~t 110 (129)
T d1ko7a1 41 YFSHYASDRIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVT---R-D-LEPPEELIEAAKEHETPLITS 110 (129)
T ss_dssp CCTTCCTTSEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEEC---T-T-CCCCHHHHHHHHHTTCCEEEC
T ss_pred HHHhcCCCeEEEEecHHHHHHhhcCcHHHHHHHHHHhCCCCcEEEEE---C-C-CCCCHHHHHHHHHhCCeEEEe
Confidence 35566677655443222222222221112223467777777776552 2 3 356688999999999999953
No 11
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=27.16 E-value=13 Score=26.93 Aligned_cols=16 Identities=6% Similarity=0.283 Sum_probs=14.6
Q ss_pred ChhHHHHHHHhCCCce
Q 018982 281 RLPKLRQFAQTENLKI 296 (348)
Q Consensus 281 r~~~l~~fA~~h~L~i 296 (348)
+++++.+||++|+|||
T Consensus 149 ~k~ei~~ya~~~~iPv 164 (165)
T d1j20a1 149 GRKEMIAYAEAHGIPV 164 (165)
T ss_dssp SHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHhCCCC
Confidence 6799999999999995
No 12
>d1zyma2 c.8.1.2 (A:3-21,A:145-249) N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system {Escherichia coli [TaxId: 562]}
Probab=26.98 E-value=9.7 Score=29.55 Aligned_cols=81 Identities=19% Similarity=0.215 Sum_probs=48.0
Q ss_pred CcEEEEEeCCC--CC-CceeEEEEcCCCCHHHHHHHH-HhcCCceEeec-----CHHHHHhcCCCccccCCCCCCCCccc
Q 018982 121 GKLVIVVDDED--RE-NEGDLIMAASLVTPEAMAFIV-RHGTGIVCVSM-----KGEDLERLELPLMVNHKDNEEKLCTA 191 (348)
Q Consensus 121 G~pVvV~Dde~--RE-nEgdLV~aAe~~T~e~vafm~-~~a~Glicval-----t~~ra~~LgLp~m~~~~~n~~~~~ta 191 (348)
|+.+++.++.. .+ .|+ -|+-++.++|..+..|. ....|+++--= ..=.|+.||+|..+............
T Consensus 12 G~v~~~~~~~~~~~~~~~~-~ILV~~~l~P~~~~~l~~~~v~Giit~~Gg~tSH~AIlAR~lgIP~vvg~~~~~~~i~~g 90 (124)
T d1zyma2 12 GKALLLKEKIIDLSAIQDE-VILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKND 90 (124)
T ss_dssp EEEEECCCCCCCGGGCCSC-EEEECSCCCHHHHHHSCGGGEEEEECSCCCSSSHHHHHHHHHTCCEECCCSCHHHHCCTT
T ss_pred EEEEEECCcHHHHHhCCCC-EEEEEccCCHHHHhhhChhheEEEEEecCCcccHHHHHHHHcCCCEEEEcccHHHHhcCC
Confidence 56555544321 11 233 46667889999888884 45566664321 23367899999988653222223445
Q ss_pred eEEEeeccCCC
Q 018982 192 FTVSVDAKYGT 202 (348)
Q Consensus 192 FtVsVDa~~gt 202 (348)
-.|+||...|.
T Consensus 91 ~~v~vDg~~G~ 101 (124)
T d1zyma2 91 DYLILDAVNNQ 101 (124)
T ss_dssp CEEEECCSSCC
T ss_pred CEEEEECCCCE
Confidence 56889976554
No 13
>d1tifa_ d.15.8.1 (A:) Translation initiation factor IF3, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=26.92 E-value=17 Score=26.20 Aligned_cols=31 Identities=19% Similarity=0.445 Sum_probs=24.4
Q ss_pred EEEecCCCC---cCChhHHHHHHHhCCCceeeHH
Q 018982 270 CEIVDDDGS---MARLPKLRQFAQTENLKIISIA 300 (348)
Q Consensus 270 ~ell~ddG~---mar~~~l~~fA~~h~L~ivsi~ 300 (348)
..|++++|+ .++..++.+.|++.||-+|-+.
T Consensus 14 VrlI~~~G~~lGv~~~~eAl~~A~~~glDLV~vs 47 (76)
T d1tifa_ 14 VRLIDQNGDQLGIKSKQEALEIAARRNLDLVLVA 47 (76)
T ss_dssp EEEECTTSCEEEEEEHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCCCcEeCeecHHHHHHHHHHcCCCEEEec
Confidence 347788886 5888999999999999777553
No 14
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.99 E-value=12 Score=27.43 Aligned_cols=16 Identities=19% Similarity=0.291 Sum_probs=13.0
Q ss_pred ChhHHHHHHHhCCCce
Q 018982 281 RLPKLRQFAQTENLKI 296 (348)
Q Consensus 281 r~~~l~~fA~~h~L~i 296 (348)
.++++.+||++|||||
T Consensus 153 sk~ei~~ya~~~~iPi 168 (168)
T d1vl2a1 153 GRTDLINYAMEKGIPI 168 (168)
T ss_dssp --CHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHcCCCC
Confidence 4578999999999996
Done!