Query 018984
Match_columns 348
No_of_seqs 484 out of 2780
Neff 11.8
Searched_HMMs 46136
Date Fri Mar 29 05:43:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018984.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018984hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02385 hydrolase; alpha/beta 100.0 4.5E-50 9.8E-55 336.1 33.3 343 1-343 5-347 (349)
2 KOG1455 Lysophospholipase [Lip 100.0 4E-44 8.8E-49 273.5 26.2 294 48-341 18-312 (313)
3 PLN02298 hydrolase, alpha/beta 100.0 1.6E-40 3.4E-45 277.1 31.5 292 54-345 29-321 (330)
4 PHA02857 monoglyceride lipase; 100.0 2.4E-36 5.2E-41 246.2 29.3 270 60-342 3-274 (276)
5 PLN02652 hydrolase; alpha/beta 100.0 1.1E-34 2.3E-39 243.3 31.1 285 52-347 105-393 (395)
6 PLN02824 hydrolase, alpha/beta 100.0 1.1E-34 2.4E-39 238.4 24.0 264 60-341 10-294 (294)
7 PRK10749 lysophospholipase L2; 100.0 1E-33 2.2E-38 235.2 28.8 276 57-341 30-329 (330)
8 COG2267 PldB Lysophospholipase 100.0 1.2E-33 2.7E-38 228.1 25.9 284 56-344 8-297 (298)
9 TIGR02240 PHA_depoly_arom poly 100.0 7.2E-34 1.6E-38 231.3 22.6 259 62-342 6-267 (276)
10 PRK00870 haloalkane dehalogena 100.0 2E-33 4.3E-38 231.7 22.2 253 68-341 34-301 (302)
11 PRK03592 haloalkane dehalogena 100.0 4.1E-33 8.8E-38 229.3 23.9 261 62-343 11-291 (295)
12 PLN03087 BODYGUARD 1 domain co 100.0 8E-33 1.7E-37 234.6 25.2 262 61-340 179-478 (481)
13 KOG4178 Soluble epoxide hydrol 100.0 3.1E-33 6.8E-38 217.7 19.9 265 57-342 21-321 (322)
14 PLN02679 hydrolase, alpha/beta 100.0 5.5E-33 1.2E-37 233.1 21.2 265 63-341 66-357 (360)
15 PLN02965 Probable pheophorbida 100.0 8.6E-33 1.9E-37 222.2 20.6 240 84-341 4-253 (255)
16 PRK10673 acyl-CoA esterase; Pr 100.0 4.1E-32 8.8E-37 219.1 22.7 250 69-341 2-255 (255)
17 PRK03204 haloalkane dehalogena 100.0 2.3E-32 5.1E-37 222.6 20.7 256 57-338 14-285 (286)
18 TIGR01607 PST-A Plasmodium sub 100.0 4.7E-31 1E-35 218.4 26.4 269 62-339 2-331 (332)
19 PLN03084 alpha/beta hydrolase 100.0 3.1E-31 6.7E-36 221.0 25.1 267 51-340 98-383 (383)
20 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.1E-31 2.3E-36 219.9 20.5 256 59-339 8-281 (282)
21 PRK10349 carboxylesterase BioH 100.0 7.5E-32 1.6E-36 217.3 18.8 241 70-339 4-254 (256)
22 TIGR03611 RutD pyrimidine util 100.0 1.3E-31 2.8E-36 216.6 20.1 251 70-339 1-256 (257)
23 PRK06489 hypothetical protein; 100.0 6.2E-31 1.3E-35 221.2 24.9 264 64-343 46-359 (360)
24 TIGR03056 bchO_mg_che_rel puta 100.0 1.7E-31 3.7E-36 218.5 20.8 260 60-339 8-278 (278)
25 PLN02578 hydrolase 100.0 1.3E-30 2.8E-35 218.7 24.0 258 61-339 69-353 (354)
26 PRK07581 hypothetical protein; 100.0 2.6E-30 5.5E-35 216.5 20.3 265 64-343 22-338 (339)
27 TIGR01250 pro_imino_pep_2 prol 100.0 1.1E-29 2.3E-34 208.9 21.4 260 62-339 6-288 (288)
28 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.5E-30 3.2E-35 209.6 15.7 241 70-339 2-251 (251)
29 PRK08775 homoserine O-acetyltr 100.0 1.7E-30 3.8E-35 217.3 16.2 259 63-342 41-340 (343)
30 TIGR01392 homoserO_Ac_trn homo 100.0 6.3E-30 1.4E-34 214.6 19.4 262 64-339 12-351 (351)
31 PLN02511 hydrolase 100.0 3.1E-29 6.8E-34 211.6 22.9 281 53-342 67-366 (388)
32 PRK11126 2-succinyl-6-hydroxy- 100.0 6.7E-30 1.5E-34 204.5 17.8 229 83-340 2-241 (242)
33 COG1647 Esterase/lipase [Gener 100.0 3.3E-29 7.1E-34 182.5 19.0 229 83-340 15-243 (243)
34 PRK00175 metX homoserine O-ace 100.0 2.2E-29 4.7E-34 212.7 20.9 268 64-343 29-376 (379)
35 TIGR01738 bioH putative pimelo 100.0 1.2E-29 2.7E-34 203.5 18.1 232 83-338 4-245 (245)
36 KOG4409 Predicted hydrolase/ac 100.0 6.5E-29 1.4E-33 194.2 21.2 270 57-340 65-363 (365)
37 PF12697 Abhydrolase_6: Alpha/ 100.0 6E-30 1.3E-34 202.9 15.5 216 86-325 1-224 (228)
38 PLN02211 methyl indole-3-aceta 100.0 5.4E-29 1.2E-33 200.9 19.5 251 65-339 4-268 (273)
39 KOG1454 Predicted hydrolase/ac 100.0 2.1E-29 4.6E-34 205.5 15.9 249 81-342 56-325 (326)
40 PRK13604 luxD acyl transferase 100.0 6.9E-28 1.5E-32 190.6 23.4 230 57-320 9-247 (307)
41 PLN02894 hydrolase, alpha/beta 100.0 1.4E-27 3E-32 202.4 26.7 259 69-343 93-387 (402)
42 PRK05077 frsA fermentation/res 100.0 2.6E-27 5.6E-32 200.6 24.8 241 57-342 168-413 (414)
43 TIGR03695 menH_SHCHC 2-succiny 100.0 1.7E-28 3.7E-33 197.5 16.5 238 83-339 1-251 (251)
44 TIGR01249 pro_imino_pep_1 prol 100.0 5E-27 1.1E-31 193.6 23.4 261 58-340 5-304 (306)
45 PRK10985 putative hydrolase; P 100.0 2.9E-27 6.4E-32 196.0 21.0 280 56-343 30-322 (324)
46 PRK14875 acetoin dehydrogenase 100.0 3.7E-27 8E-32 200.7 20.0 240 63-340 114-370 (371)
47 PLN02980 2-oxoglutarate decarb 100.0 4.2E-27 9E-32 228.2 22.8 248 82-346 1370-1644(1655)
48 TIGR03100 hydr1_PEP hydrolase, 99.9 4.7E-25 1E-29 178.2 24.3 259 60-339 4-273 (274)
49 KOG2382 Predicted alpha/beta h 99.9 2.4E-25 5.2E-30 174.0 20.9 262 68-342 36-314 (315)
50 PRK06765 homoserine O-acetyltr 99.9 2.6E-26 5.7E-31 192.0 16.6 265 66-341 39-388 (389)
51 PRK05855 short chain dehydroge 99.9 1.8E-25 3.9E-30 201.7 20.1 264 60-341 5-292 (582)
52 KOG2984 Predicted hydrolase [G 99.9 3.6E-26 7.8E-31 163.7 11.4 242 63-341 26-276 (277)
53 PRK10566 esterase; Provisional 99.9 2.5E-24 5.4E-29 172.8 22.2 212 82-342 26-249 (249)
54 PLN02872 triacylglycerol lipas 99.9 2.2E-24 4.8E-29 180.3 20.9 283 53-345 40-393 (395)
55 TIGR01836 PHA_synth_III_C poly 99.9 2.3E-23 5E-28 174.8 24.7 275 57-341 37-350 (350)
56 KOG4391 Predicted alpha/beta h 99.9 1.7E-24 3.8E-29 156.9 15.0 238 50-344 47-285 (300)
57 COG0429 Predicted hydrolase of 99.9 5.2E-23 1.1E-27 160.4 19.8 278 57-343 49-342 (345)
58 KOG1552 Predicted alpha/beta h 99.9 6.9E-23 1.5E-27 154.4 17.2 220 57-344 35-255 (258)
59 COG1506 DAP2 Dipeptidyl aminop 99.9 1.4E-22 3E-27 180.9 19.0 247 56-344 364-619 (620)
60 PF00561 Abhydrolase_1: alpha/ 99.9 4.2E-23 9E-28 164.0 11.7 206 112-325 1-223 (230)
61 PRK11071 esterase YqiA; Provis 99.9 1E-21 2.2E-26 149.0 17.8 184 84-339 2-189 (190)
62 PF12695 Abhydrolase_5: Alpha/ 99.9 4.3E-22 9.3E-27 146.2 15.3 145 85-317 1-145 (145)
63 KOG1838 Alpha/beta hydrolase [ 99.9 2.7E-21 5.9E-26 156.7 20.8 282 51-340 87-387 (409)
64 PRK11460 putative hydrolase; P 99.9 1.9E-21 4.1E-26 152.8 18.7 183 80-343 13-210 (232)
65 PF01738 DLH: Dienelactone hyd 99.9 1.6E-21 3.5E-26 152.7 17.9 201 71-342 2-218 (218)
66 TIGR01838 PHA_synth_I poly(R)- 99.9 1.6E-21 3.4E-26 167.7 18.7 246 69-324 173-462 (532)
67 TIGR02821 fghA_ester_D S-formy 99.9 4.1E-20 9E-25 149.6 23.7 235 53-341 10-274 (275)
68 TIGR03101 hydr2_PEP hydrolase, 99.9 2.7E-21 5.8E-26 152.8 15.9 129 62-194 4-135 (266)
69 PRK07868 acyl-CoA synthetase; 99.9 2.1E-20 4.5E-25 176.2 24.6 272 60-344 41-364 (994)
70 PLN02442 S-formylglutathione h 99.9 2.5E-20 5.4E-25 151.0 21.8 242 51-343 13-282 (283)
71 KOG4667 Predicted esterase [Li 99.9 8.4E-21 1.8E-25 137.8 16.3 246 60-344 13-261 (269)
72 PF00326 Peptidase_S9: Prolyl 99.9 2.5E-21 5.3E-26 151.3 14.4 203 100-344 3-212 (213)
73 KOG2564 Predicted acetyltransf 99.9 8.8E-21 1.9E-25 143.4 15.8 261 59-342 49-328 (343)
74 PF05448 AXE1: Acetyl xylan es 99.9 4.2E-20 9E-25 150.3 20.6 250 51-341 50-320 (320)
75 COG0412 Dienelactone hydrolase 99.9 1.9E-19 4E-24 140.6 23.0 209 63-343 7-235 (236)
76 PLN00021 chlorophyllase 99.9 1.1E-19 2.5E-24 147.7 19.2 208 68-345 37-287 (313)
77 PF06500 DUF1100: Alpha/beta h 99.8 6.5E-20 1.4E-24 150.0 16.6 235 61-342 168-410 (411)
78 PF06342 DUF1057: Alpha/beta h 99.8 3.4E-19 7.3E-24 136.4 18.6 203 80-301 32-238 (297)
79 COG0596 MhpC Predicted hydrola 99.8 2.7E-19 5.8E-24 145.5 18.5 252 66-338 8-279 (282)
80 TIGR00976 /NonD putative hydro 99.8 1.7E-19 3.6E-24 159.8 17.7 132 63-197 2-136 (550)
81 TIGR01840 esterase_phb esteras 99.8 4.5E-19 9.7E-24 138.1 14.9 120 73-193 2-130 (212)
82 COG2945 Predicted hydrolase of 99.8 2.9E-18 6.2E-23 122.9 16.3 197 57-339 4-205 (210)
83 COG2021 MET2 Homoserine acetyl 99.8 1.3E-18 2.8E-23 138.4 15.7 262 65-340 33-367 (368)
84 PF08538 DUF1749: Protein of u 99.8 2.4E-18 5.3E-23 135.0 16.3 257 73-339 23-303 (303)
85 PF02230 Abhydrolase_2: Phosph 99.8 1.9E-18 4.2E-23 134.8 15.2 187 78-342 9-216 (216)
86 PRK10162 acetyl esterase; Prov 99.8 8E-17 1.7E-21 132.9 24.3 245 57-343 57-317 (318)
87 COG3208 GrsT Predicted thioest 99.8 2.5E-17 5.4E-22 123.8 17.7 221 83-339 7-234 (244)
88 PRK10115 protease 2; Provision 99.8 8.4E-17 1.8E-21 144.9 22.2 229 54-318 413-654 (686)
89 PF03096 Ndr: Ndr family; Int 99.8 1.7E-16 3.7E-21 123.4 19.7 258 61-340 3-278 (283)
90 PF02129 Peptidase_S15: X-Pro 99.8 2.8E-17 6E-22 133.0 16.1 129 66-197 1-140 (272)
91 KOG2931 Differentiation-relate 99.8 2.5E-16 5.4E-21 120.6 18.8 267 57-340 22-305 (326)
92 COG3458 Acetyl esterase (deace 99.8 1.1E-16 2.3E-21 121.1 16.5 245 53-341 52-317 (321)
93 TIGR01839 PHA_synth_II poly(R) 99.7 2.3E-16 5E-21 134.4 19.5 240 70-317 201-481 (560)
94 COG4757 Predicted alpha/beta h 99.7 1.9E-17 4.2E-22 122.0 10.4 265 60-338 8-280 (281)
95 PF02273 Acyl_transf_2: Acyl t 99.7 5.1E-16 1.1E-20 115.7 17.0 233 59-324 4-243 (294)
96 COG0400 Predicted esterase [Ge 99.7 2.3E-16 4.9E-21 119.1 15.5 182 80-342 15-206 (207)
97 TIGR01849 PHB_depoly_PhaZ poly 99.7 1.9E-15 4.1E-20 125.3 21.2 272 57-341 75-406 (406)
98 PF12146 Hydrolase_4: Putative 99.7 2.7E-17 5.8E-22 104.3 7.9 79 67-147 1-79 (79)
99 PF06821 Ser_hydrolase: Serine 99.7 3.4E-16 7.4E-21 115.7 14.4 156 86-322 1-158 (171)
100 TIGR03230 lipo_lipase lipoprot 99.7 9.3E-16 2E-20 128.5 13.1 113 82-195 40-156 (442)
101 cd00707 Pancreat_lipase_like P 99.7 4.1E-16 8.9E-21 125.4 10.0 125 66-195 23-149 (275)
102 PF10230 DUF2305: Uncharacteri 99.7 3.1E-14 6.8E-19 113.7 19.7 114 83-197 2-126 (266)
103 PF12740 Chlorophyllase2: Chlo 99.7 1.8E-14 3.8E-19 111.4 17.4 204 72-345 6-254 (259)
104 PF12715 Abhydrolase_7: Abhydr 99.7 1.3E-15 2.8E-20 122.7 11.6 148 45-193 76-260 (390)
105 COG3571 Predicted hydrolase of 99.6 6.6E-14 1.4E-18 97.2 17.6 188 80-340 11-210 (213)
106 KOG3043 Predicted hydrolase re 99.6 8.6E-15 1.9E-19 107.9 13.5 185 84-343 40-242 (242)
107 PRK05371 x-prolyl-dipeptidyl a 99.6 5.6E-14 1.2E-18 127.6 19.7 229 102-345 270-523 (767)
108 KOG2624 Triglyceride lipase-ch 99.6 8E-14 1.7E-18 115.5 18.0 284 52-342 43-399 (403)
109 PF05728 UPF0227: Uncharacteri 99.6 7.5E-14 1.6E-18 104.3 15.4 182 86-338 2-186 (187)
110 PF00975 Thioesterase: Thioest 99.6 2E-13 4.4E-18 108.1 18.8 102 84-194 1-105 (229)
111 KOG1515 Arylacetamide deacetyl 99.6 1.1E-12 2.4E-17 106.5 22.9 252 62-341 66-335 (336)
112 COG0657 Aes Esterase/lipase [L 99.6 5.6E-13 1.2E-17 110.4 21.9 237 64-340 58-309 (312)
113 PF07859 Abhydrolase_3: alpha/ 99.5 1E-13 2.2E-18 108.3 12.6 101 86-195 1-112 (211)
114 TIGR03502 lipase_Pla1_cef extr 99.5 9.2E-14 2E-18 123.9 13.4 117 61-178 421-575 (792)
115 PF03403 PAF-AH_p_II: Platelet 99.5 3.2E-13 6.9E-18 113.0 15.0 189 81-343 98-360 (379)
116 PF10503 Esterase_phd: Esteras 99.5 7E-13 1.5E-17 101.5 14.9 123 70-193 1-132 (220)
117 PF09752 DUF2048: Uncharacteri 99.5 3.3E-12 7.2E-17 102.3 18.9 248 69-337 76-345 (348)
118 KOG2100 Dipeptidyl aminopeptid 99.5 8.1E-13 1.8E-17 119.8 17.0 232 66-345 506-751 (755)
119 COG3243 PhaC Poly(3-hydroxyalk 99.5 9.6E-13 2.1E-17 106.8 15.0 261 74-342 97-400 (445)
120 COG2936 Predicted acyl esteras 99.5 9.4E-13 2E-17 112.2 15.1 138 57-197 19-163 (563)
121 PF07224 Chlorophyllase: Chlor 99.5 1.1E-12 2.4E-17 99.2 13.8 118 69-195 32-159 (307)
122 PF08840 BAAT_C: BAAT / Acyl-C 99.5 2.9E-13 6.4E-18 104.6 10.3 180 140-343 4-212 (213)
123 COG4099 Predicted peptidase [G 99.5 2E-12 4.3E-17 99.5 14.3 124 64-193 168-304 (387)
124 KOG2565 Predicted hydrolases o 99.5 6.1E-12 1.3E-16 99.9 16.3 124 59-189 125-260 (469)
125 COG3545 Predicted esterase of 99.4 7.7E-12 1.7E-16 89.2 14.3 175 84-339 3-177 (181)
126 KOG2281 Dipeptidyl aminopeptid 99.4 1.5E-11 3.3E-16 104.2 18.2 233 60-340 616-866 (867)
127 KOG4627 Kynurenine formamidase 99.4 2.5E-12 5.3E-17 93.5 10.9 205 57-322 44-252 (270)
128 PTZ00472 serine carboxypeptida 99.4 5E-11 1.1E-15 102.7 20.1 127 67-195 60-218 (462)
129 PF06057 VirJ: Bacterial virul 99.4 4.4E-12 9.5E-17 92.7 10.5 102 84-194 3-108 (192)
130 PF06028 DUF915: Alpha/beta hy 99.4 3.9E-11 8.4E-16 94.2 15.6 208 83-339 11-253 (255)
131 PF03583 LIP: Secretory lipase 99.4 7E-11 1.5E-15 95.8 17.6 233 101-346 16-286 (290)
132 COG4188 Predicted dienelactone 99.4 7.3E-13 1.6E-17 106.3 5.3 225 67-325 49-302 (365)
133 KOG2551 Phospholipase/carboxyh 99.3 1.8E-10 4E-15 85.4 15.0 179 83-342 5-221 (230)
134 KOG3975 Uncharacterized conser 99.3 3.1E-10 6.7E-15 85.3 16.3 249 79-337 25-299 (301)
135 PF05677 DUF818: Chlamydia CHL 99.3 2E-09 4.4E-14 85.5 21.7 118 58-179 112-236 (365)
136 PF03959 FSH1: Serine hydrolas 99.3 2.3E-11 5.1E-16 94.3 10.8 164 83-321 4-205 (212)
137 COG3509 LpqC Poly(3-hydroxybut 99.3 3.4E-10 7.3E-15 87.9 16.4 134 58-193 35-179 (312)
138 KOG2112 Lysophospholipase [Lip 99.3 1E-10 2.2E-15 86.2 12.6 182 83-340 3-203 (206)
139 PF07819 PGAP1: PGAP1-like pro 99.2 2.5E-10 5.4E-15 88.9 13.2 109 83-196 4-126 (225)
140 KOG3847 Phospholipase A2 (plat 99.2 6.2E-10 1.3E-14 86.6 14.9 189 81-343 116-373 (399)
141 PRK10252 entF enterobactin syn 99.2 6.2E-10 1.3E-14 110.1 19.1 101 83-193 1068-1171(1296)
142 PRK04940 hypothetical protein; 99.2 3.1E-09 6.8E-14 77.8 15.9 175 86-339 2-178 (180)
143 PRK10439 enterobactin/ferric e 99.1 1.9E-08 4.1E-13 85.6 21.0 131 62-193 186-323 (411)
144 KOG1553 Predicted alpha/beta h 99.1 9.2E-10 2E-14 86.9 10.6 128 59-194 216-346 (517)
145 KOG3101 Esterase D [General fu 99.1 1.8E-09 4E-14 79.1 11.1 142 52-195 10-178 (283)
146 COG3319 Thioesterase domains o 99.1 9.3E-09 2E-13 80.6 15.9 101 84-194 1-104 (257)
147 KOG3253 Predicted alpha/beta h 99.1 4.4E-09 9.5E-14 89.1 14.2 188 83-342 176-379 (784)
148 PF00151 Lipase: Lipase; Inte 99.1 1.8E-10 3.8E-15 94.6 5.0 115 81-196 69-190 (331)
149 KOG4840 Predicted hydrolases o 99.0 1E-08 2.2E-13 75.9 13.2 108 83-196 36-147 (299)
150 PF00450 Peptidase_S10: Serine 99.0 2.3E-08 5.1E-13 86.7 17.2 137 57-195 11-183 (415)
151 PF12048 DUF3530: Protein of u 99.0 1.7E-07 3.6E-12 76.8 20.3 207 61-341 65-309 (310)
152 PF01674 Lipase_2: Lipase (cla 99.0 7.8E-10 1.7E-14 84.7 5.9 92 84-179 2-96 (219)
153 PLN02733 phosphatidylcholine-s 99.0 2.2E-09 4.8E-14 91.2 9.1 93 98-196 108-204 (440)
154 PF05990 DUF900: Alpha/beta hy 98.9 1.1E-08 2.4E-13 80.2 10.9 112 81-194 16-138 (233)
155 COG1770 PtrB Protease II [Amin 98.9 4.5E-08 9.7E-13 84.5 15.1 230 57-325 419-664 (682)
156 PF11339 DUF3141: Protein of u 98.9 2.9E-07 6.3E-12 77.5 18.8 89 101-197 91-179 (581)
157 COG1505 Serine proteases of th 98.9 4.7E-08 1E-12 83.3 14.4 251 52-342 389-647 (648)
158 COG4814 Uncharacterized protei 98.9 8.7E-08 1.9E-12 72.8 13.7 204 84-340 46-286 (288)
159 PF00756 Esterase: Putative es 98.9 1.7E-08 3.7E-13 81.1 10.8 129 67-195 5-152 (251)
160 smart00824 PKS_TE Thioesterase 98.8 1.6E-07 3.5E-12 73.3 13.3 85 100-193 15-102 (212)
161 KOG2237 Predicted serine prote 98.8 1.2E-07 2.5E-12 81.4 12.9 148 48-195 432-586 (712)
162 PF05057 DUF676: Putative seri 98.8 5.6E-07 1.2E-11 70.1 15.1 93 82-177 3-97 (217)
163 COG1073 Hydrolases of the alph 98.7 2.2E-07 4.9E-12 76.7 13.0 244 68-342 31-298 (299)
164 PLN02606 palmitoyl-protein thi 98.7 1.4E-06 3E-11 69.3 16.2 102 84-194 27-133 (306)
165 COG3150 Predicted esterase [Ge 98.7 8.5E-07 1.8E-11 62.9 12.8 92 86-195 2-93 (191)
166 cd00312 Esterase_lipase Estera 98.7 1.2E-07 2.6E-12 84.1 9.3 123 69-194 78-214 (493)
167 PF05705 DUF829: Eukaryotic pr 98.7 6.5E-06 1.4E-10 65.6 18.2 226 86-338 2-240 (240)
168 PLN02209 serine carboxypeptida 98.6 2.9E-05 6.3E-10 66.7 22.3 129 66-195 50-214 (437)
169 PLN02633 palmitoyl protein thi 98.6 6.7E-06 1.5E-10 65.5 16.3 103 84-194 26-132 (314)
170 PF11144 DUF2920: Protein of u 98.6 7.7E-06 1.7E-10 67.7 17.1 127 67-193 19-219 (403)
171 PF05577 Peptidase_S28: Serine 98.6 1.3E-06 2.7E-11 76.1 13.0 112 83-194 29-149 (434)
172 COG0627 Predicted esterase [Ge 98.6 7.1E-06 1.5E-10 66.9 15.8 114 81-197 52-191 (316)
173 COG4782 Uncharacterized protei 98.5 8.2E-07 1.8E-11 71.6 9.9 112 81-194 114-235 (377)
174 KOG1282 Serine carboxypeptidas 98.5 0.00013 2.8E-09 62.4 23.2 140 55-196 42-216 (454)
175 COG1075 LipA Predicted acetylt 98.5 4.7E-07 1E-11 75.3 7.5 103 83-195 59-166 (336)
176 COG2272 PnbA Carboxylesterase 98.5 1.2E-06 2.6E-11 73.7 9.7 123 70-194 80-218 (491)
177 PF04301 DUF452: Protein of un 98.5 2.6E-05 5.5E-10 59.4 15.6 80 83-194 11-91 (213)
178 PLN03016 sinapoylglucose-malat 98.5 0.00013 2.9E-09 62.8 21.8 138 57-195 37-212 (433)
179 PF10142 PhoPQ_related: PhoPQ- 98.4 0.00014 3E-09 60.5 20.3 156 154-344 168-323 (367)
180 PF10340 DUF2424: Protein of u 98.4 6.3E-06 1.4E-10 68.0 12.2 117 72-196 108-238 (374)
181 KOG1551 Uncharacterized conser 98.4 2E-05 4.3E-10 60.6 12.7 249 70-341 102-366 (371)
182 PF00135 COesterase: Carboxyle 98.3 7.6E-06 1.7E-10 73.7 11.8 123 70-194 109-246 (535)
183 PF02089 Palm_thioest: Palmito 98.3 2.5E-06 5.5E-11 67.3 7.0 108 83-194 5-117 (279)
184 COG4553 DepA Poly-beta-hydroxy 98.2 6.4E-05 1.4E-09 58.8 13.5 118 71-197 91-213 (415)
185 PF02450 LCAT: Lecithin:choles 98.2 6.3E-06 1.4E-10 70.2 8.7 85 99-195 66-162 (389)
186 COG3946 VirJ Type IV secretory 98.2 5.6E-05 1.2E-09 62.0 13.0 103 69-180 246-348 (456)
187 PF07082 DUF1350: Protein of u 98.1 3.1E-05 6.7E-10 59.7 9.8 105 81-191 15-123 (250)
188 KOG2183 Prolylcarboxypeptidase 98.1 4.8E-05 1E-09 62.5 11.4 108 84-194 81-203 (492)
189 COG2382 Fes Enterochelin ester 98.1 0.00016 3.4E-09 57.4 13.3 110 82-194 97-213 (299)
190 PF08386 Abhydrolase_4: TAP-li 98.1 1.9E-05 4.1E-10 53.3 7.0 60 275-340 34-93 (103)
191 PLN02213 sinapoylglucose-malat 98.0 0.00088 1.9E-08 55.7 17.0 84 112-195 2-98 (319)
192 KOG3724 Negative regulator of 98.0 7.1E-05 1.5E-09 66.5 10.6 106 83-193 89-220 (973)
193 KOG3967 Uncharacterized conser 98.0 0.00032 7E-09 52.3 11.9 128 81-213 99-247 (297)
194 COG2819 Predicted hydrolase of 97.9 0.00059 1.3E-08 53.4 13.3 41 154-194 133-173 (264)
195 KOG2182 Hydrolytic enzymes of 97.9 0.00022 4.7E-09 60.3 10.7 113 82-194 85-208 (514)
196 KOG2541 Palmitoyl protein thio 97.8 0.00047 1E-08 53.5 10.3 102 84-193 24-128 (296)
197 cd00741 Lipase Lipase. Lipase 97.6 0.00018 3.9E-09 52.9 6.1 56 136-193 8-67 (153)
198 COG2939 Carboxypeptidase C (ca 97.6 0.0073 1.6E-07 51.8 15.5 126 70-197 87-240 (498)
199 PLN02517 phosphatidylcholine-s 97.5 0.00019 4.2E-09 62.5 6.1 91 100-194 158-264 (642)
200 PF06259 Abhydrolase_8: Alpha/ 97.5 0.0029 6.3E-08 47.0 11.3 112 82-194 18-145 (177)
201 PF11187 DUF2974: Protein of u 97.5 0.0017 3.7E-08 50.6 10.2 36 159-194 85-124 (224)
202 PF04083 Abhydro_lipase: Parti 97.4 0.00055 1.2E-08 41.0 5.2 47 53-99 8-59 (63)
203 KOG2369 Lecithin:cholesterol a 97.2 0.00078 1.7E-08 56.8 6.1 85 99-191 125-223 (473)
204 KOG4388 Hormone-sensitive lipa 97.2 0.0053 1.2E-07 53.2 10.1 113 72-195 385-510 (880)
205 PF01083 Cutinase: Cutinase; 97.1 0.0011 2.4E-08 49.8 4.8 77 112-193 40-122 (179)
206 KOG1283 Serine carboxypeptidas 97.0 0.015 3.2E-07 46.7 10.9 135 63-198 9-171 (414)
207 PF01764 Lipase_3: Lipase (cla 97.0 0.0016 3.5E-08 47.0 5.0 38 139-178 47-84 (140)
208 PF07519 Tannase: Tannase and 97.0 0.019 4E-07 50.5 12.2 126 63-195 8-152 (474)
209 cd00519 Lipase_3 Lipase (class 97.0 0.0016 3.5E-08 51.4 5.3 57 134-192 106-167 (229)
210 KOG2521 Uncharacterized conser 96.9 0.041 8.8E-07 45.6 12.9 66 274-343 224-292 (350)
211 COG2830 Uncharacterized protei 96.7 0.057 1.2E-06 38.7 10.7 81 82-194 10-91 (214)
212 KOG1516 Carboxylesterase and r 96.6 0.022 4.8E-07 51.6 10.1 119 70-193 97-232 (545)
213 TIGR03712 acc_sec_asp2 accesso 96.5 0.5 1.1E-05 40.9 18.0 122 59-194 267-391 (511)
214 PF05576 Peptidase_S37: PS-10 96.4 0.013 2.9E-07 48.9 6.8 109 80-194 60-170 (448)
215 PF11288 DUF3089: Protein of u 96.4 0.0074 1.6E-07 45.9 5.0 73 105-179 40-116 (207)
216 PLN02454 triacylglycerol lipas 96.1 0.017 3.8E-07 48.8 6.3 42 137-178 207-248 (414)
217 PLN02162 triacylglycerol lipas 96.1 0.018 3.8E-07 49.3 6.1 22 156-177 276-297 (475)
218 PLN00413 triacylglycerol lipas 96.0 0.021 4.5E-07 49.0 6.2 22 156-177 282-303 (479)
219 PF06441 EHN: Epoxide hydrolas 95.9 0.022 4.7E-07 38.9 4.8 39 59-98 69-107 (112)
220 PLN02310 triacylglycerol lipas 95.7 0.039 8.4E-07 46.7 6.6 21 158-178 209-229 (405)
221 PF06850 PHB_depo_C: PHB de-po 95.7 0.028 6.1E-07 41.9 5.0 66 275-341 134-202 (202)
222 PLN02571 triacylglycerol lipas 95.5 0.029 6.2E-07 47.6 5.3 20 159-178 227-246 (413)
223 PLN02408 phospholipase A1 95.4 0.032 7E-07 46.6 5.0 20 159-178 201-220 (365)
224 PF05277 DUF726: Protein of un 95.3 0.054 1.2E-06 45.1 6.2 41 155-195 217-262 (345)
225 PLN02324 triacylglycerol lipas 95.1 0.044 9.5E-07 46.5 5.0 39 140-178 197-235 (415)
226 PLN03037 lipase class 3 family 94.9 0.042 9.2E-07 47.7 4.7 39 138-178 300-338 (525)
227 PLN02934 triacylglycerol lipas 94.8 0.045 9.8E-07 47.4 4.3 34 142-177 307-340 (515)
228 PLN02802 triacylglycerol lipas 94.7 0.059 1.3E-06 46.8 4.8 20 159-178 331-350 (509)
229 KOG4372 Predicted alpha/beta h 94.6 0.046 9.9E-07 45.7 3.8 89 81-176 78-168 (405)
230 PLN02847 triacylglycerol lipas 94.4 0.08 1.7E-06 46.9 5.1 24 155-178 248-271 (633)
231 PLN02761 lipase class 3 family 94.3 0.076 1.7E-06 46.2 4.8 20 158-177 294-313 (527)
232 PLN02753 triacylglycerol lipas 94.2 0.088 1.9E-06 45.9 4.9 21 157-177 311-331 (531)
233 COG5153 CVT17 Putative lipase 94.0 0.13 2.8E-06 40.8 5.0 48 140-191 260-307 (425)
234 KOG4540 Putative lipase essent 94.0 0.13 2.8E-06 40.8 5.0 48 140-191 260-307 (425)
235 KOG1202 Animal-type fatty acid 93.9 0.33 7.1E-06 46.7 8.0 96 82-193 2122-2219(2376)
236 COG4947 Uncharacterized protei 93.8 0.17 3.6E-06 36.9 4.9 36 159-194 102-137 (227)
237 PLN02719 triacylglycerol lipas 93.6 0.13 2.9E-06 44.7 4.8 20 158-177 298-317 (518)
238 PF08237 PE-PPE: PE-PPE domain 93.2 0.54 1.2E-05 36.9 7.4 64 111-178 2-68 (225)
239 KOG4569 Predicted lipase [Lipi 92.9 0.15 3.2E-06 42.9 4.1 22 157-178 170-191 (336)
240 COG4287 PqaA PhoPQ-activated p 92.4 0.5 1.1E-05 39.2 6.2 48 272-320 326-373 (507)
241 PF09949 DUF2183: Uncharacteri 91.8 1.9 4.1E-05 28.8 7.5 84 99-188 12-97 (100)
242 KOG2029 Uncharacterized conser 91.8 0.35 7.5E-06 42.8 5.0 55 138-192 506-571 (697)
243 PF03283 PAE: Pectinacetyleste 90.8 1.1 2.4E-05 38.1 7.0 53 139-191 137-193 (361)
244 PF07519 Tannase: Tannase and 90.3 0.63 1.4E-05 41.2 5.4 69 272-342 350-428 (474)
245 PF09994 DUF2235: Uncharacteri 90.0 3.1 6.6E-05 34.0 8.8 95 84-179 2-113 (277)
246 COG3673 Uncharacterized conser 88.5 6.2 0.00013 32.5 9.0 97 81-178 29-142 (423)
247 KOG4389 Acetylcholinesterase/B 83.7 7.5 0.00016 34.1 7.7 143 70-216 121-278 (601)
248 PF05576 Peptidase_S37: PS-10 81.7 4.1 9E-05 34.8 5.5 70 266-339 342-412 (448)
249 KOG2385 Uncharacterized conser 81.4 4.1 8.9E-05 35.7 5.4 41 155-195 444-489 (633)
250 COG4822 CbiK Cobalamin biosynt 76.9 14 0.00031 28.4 6.5 43 80-122 135-178 (265)
251 PRK12467 peptide synthase; Pro 76.6 31 0.00067 40.2 11.7 98 83-190 3692-3792(3956)
252 TIGR02069 cyanophycinase cyano 72.7 24 0.00053 28.3 7.4 41 80-120 25-66 (250)
253 COG3340 PepE Peptidase E [Amin 72.7 14 0.00031 28.5 5.6 38 83-120 32-71 (224)
254 PF06792 UPF0261: Uncharacteri 72.4 59 0.0013 28.2 9.8 102 85-189 3-126 (403)
255 cd03818 GT1_ExpC_like This fam 72.3 22 0.00048 30.8 7.8 37 86-125 2-38 (396)
256 PF12242 Eno-Rase_NADH_b: NAD( 71.5 13 0.00028 23.2 4.3 46 135-180 16-62 (78)
257 PRK02399 hypothetical protein; 69.7 75 0.0016 27.6 10.1 101 87-189 6-128 (406)
258 cd01714 ETF_beta The electron 67.1 34 0.00074 26.4 7.0 72 103-189 68-145 (202)
259 PF10605 3HBOH: 3HB-oligomer h 66.0 16 0.00034 33.2 5.3 69 273-341 552-637 (690)
260 PF08484 Methyltransf_14: C-me 64.0 30 0.00065 25.6 5.8 53 135-191 50-102 (160)
261 PRK05282 (alpha)-aspartyl dipe 61.2 69 0.0015 25.5 7.7 38 83-120 31-70 (233)
262 PF06309 Torsin: Torsin; Inte 60.9 9.2 0.0002 26.8 2.5 65 81-151 50-118 (127)
263 cd07198 Patatin Patatin-like p 60.7 15 0.00032 27.5 3.9 22 159-180 27-48 (172)
264 PF10081 Abhydrolase_9: Alpha/ 60.2 14 0.0003 30.0 3.7 38 157-194 108-148 (289)
265 cd07225 Pat_PNPLA6_PNPLA7 Pata 58.3 15 0.00033 30.5 3.9 21 159-179 44-64 (306)
266 PLN02748 tRNA dimethylallyltra 58.2 76 0.0017 28.3 8.2 77 83-166 21-120 (468)
267 COG0796 MurI Glutamate racemas 58.0 37 0.0008 27.5 5.7 63 275-342 5-67 (269)
268 PF00698 Acyl_transf_1: Acyl t 57.7 9.7 0.00021 31.9 2.7 19 159-177 85-103 (318)
269 cd07207 Pat_ExoU_VipD_like Exo 57.7 16 0.00035 27.8 3.7 21 159-179 28-48 (194)
270 cd03146 GAT1_Peptidase_E Type 57.2 91 0.002 24.3 7.9 82 83-174 31-129 (212)
271 PRK10279 hypothetical protein; 57.0 15 0.00032 30.5 3.6 21 159-179 34-54 (300)
272 cd03145 GAT1_cyanophycinase Ty 56.0 92 0.002 24.4 7.7 38 83-120 29-67 (217)
273 smart00827 PKS_AT Acyl transfe 55.9 14 0.0003 30.5 3.4 19 159-177 83-101 (298)
274 PF13207 AAA_17: AAA domain; P 55.3 24 0.00051 24.2 4.0 37 86-125 1-40 (121)
275 TIGR03131 malonate_mdcH malona 54.8 15 0.00033 30.3 3.4 20 158-177 76-95 (295)
276 PF00448 SRP54: SRP54-type pro 54.3 54 0.0012 25.2 6.0 72 103-189 75-148 (196)
277 COG1752 RssA Predicted esteras 53.2 18 0.0004 30.1 3.6 22 159-180 40-61 (306)
278 PRK14729 miaA tRNA delta(2)-is 53.0 1E+02 0.0022 25.7 7.7 74 86-166 6-101 (300)
279 cd07227 Pat_Fungal_NTE1 Fungal 52.3 22 0.00048 28.9 3.8 21 159-179 39-59 (269)
280 cd07210 Pat_hypo_W_succinogene 51.9 25 0.00053 27.7 3.9 21 159-179 29-49 (221)
281 COG0529 CysC Adenylylsulfate k 51.9 1E+02 0.0023 23.4 7.5 37 83-119 22-59 (197)
282 PRK00091 miaA tRNA delta(2)-is 50.7 77 0.0017 26.5 6.7 66 84-152 4-92 (307)
283 TIGR02884 spore_pdaA delta-lac 50.7 18 0.00038 28.6 3.0 34 84-118 187-221 (224)
284 cd07209 Pat_hypo_Ecoli_Z1214_l 49.7 26 0.00055 27.4 3.7 22 159-180 27-48 (215)
285 COG1073 Hydrolases of the alph 49.2 1.1 2.5E-05 36.6 -4.1 107 83-192 88-198 (299)
286 TIGR00128 fabD malonyl CoA-acy 48.2 21 0.00046 29.3 3.3 19 159-177 84-102 (290)
287 cd05312 NAD_bind_1_malic_enz N 47.6 32 0.0007 28.1 4.0 82 86-176 27-124 (279)
288 PLN02840 tRNA dimethylallyltra 47.4 1.2E+02 0.0027 26.6 7.6 77 83-166 20-119 (421)
289 cd07228 Pat_NTE_like_bacteria 46.2 33 0.00073 25.7 3.8 22 159-180 29-50 (175)
290 PF01583 APS_kinase: Adenylyls 46.1 37 0.0008 25.0 3.8 37 83-119 1-38 (156)
291 COG2240 PdxK Pyridoxal/pyridox 45.0 1.7E+02 0.0038 24.0 10.5 97 89-197 11-117 (281)
292 TIGR02764 spore_ybaN_pdaB poly 44.2 18 0.00038 27.6 2.0 34 84-118 152-188 (191)
293 COG3727 Vsr DNA G:T-mismatch r 43.6 68 0.0015 22.6 4.4 14 104-117 101-114 (150)
294 cd03557 L-arabinose_isomerase 43.6 2.5E+02 0.0054 25.4 10.0 60 134-194 17-78 (484)
295 cd07212 Pat_PNPLA9 Patatin-lik 43.5 21 0.00046 29.8 2.5 19 161-179 35-53 (312)
296 cd07205 Pat_PNPLA6_PNPLA7_NTE1 43.3 40 0.00088 25.2 3.8 21 159-179 29-49 (175)
297 cd07224 Pat_like Patatin-like 42.7 49 0.0011 26.3 4.3 21 160-180 31-51 (233)
298 PRK14974 cell division protein 42.3 1.6E+02 0.0035 25.0 7.5 66 109-189 220-287 (336)
299 PF14606 Lipase_GDSL_3: GDSL-l 41.8 84 0.0018 23.7 5.1 30 134-165 72-101 (178)
300 TIGR00521 coaBC_dfp phosphopan 41.7 2.4E+02 0.0051 24.7 8.5 59 102-165 133-193 (390)
301 PF11713 Peptidase_C80: Peptid 41.0 19 0.00041 26.5 1.6 56 115-170 57-116 (157)
302 TIGR02873 spore_ylxY probable 40.7 25 0.00054 28.6 2.5 34 84-118 231-264 (268)
303 COG0541 Ffh Signal recognition 40.6 1.6E+02 0.0035 25.9 7.2 66 109-189 180-247 (451)
304 TIGR03709 PPK2_rel_1 polyphosp 40.5 29 0.00062 28.1 2.7 38 83-120 55-93 (264)
305 TIGR02690 resist_ArsH arsenica 40.5 1.8E+02 0.0039 22.9 9.4 29 142-171 109-141 (219)
306 PF03205 MobB: Molybdopterin g 40.1 48 0.001 23.8 3.6 41 86-126 2-43 (140)
307 PF06833 MdcE: Malonate decarb 39.6 66 0.0014 25.5 4.4 57 112-174 66-124 (234)
308 PF03681 UPF0150: Uncharacteri 39.6 45 0.00097 18.5 2.7 34 109-148 11-44 (48)
309 cd03131 GATase1_HTS Type 1 glu 39.4 16 0.00035 27.4 1.1 36 137-178 82-117 (175)
310 PRK13690 hypothetical protein; 39.1 70 0.0015 23.9 4.2 34 134-167 2-35 (184)
311 KOG0781 Signal recognition par 38.9 68 0.0015 28.5 4.7 70 105-189 460-538 (587)
312 TIGR03707 PPK2_P_aer polyphosp 37.9 34 0.00074 27.1 2.7 38 83-120 30-68 (230)
313 cd07230 Pat_TGL4-5_like Triacy 37.9 28 0.0006 30.6 2.4 24 159-182 102-125 (421)
314 COG1856 Uncharacterized homolo 37.7 1.8E+02 0.0038 23.0 6.2 82 103-190 102-187 (275)
315 COG0031 CysK Cysteine synthase 37.4 2.4E+02 0.0053 23.5 9.3 122 61-191 144-291 (300)
316 PRK00865 glutamate racemase; P 37.2 1.1E+02 0.0023 24.9 5.5 49 290-340 17-65 (261)
317 PRK05368 homoserine O-succinyl 37.1 57 0.0012 27.1 4.0 35 138-178 120-154 (302)
318 COG5023 Tubulin [Cytoskeleton] 36.5 1.2E+02 0.0025 26.1 5.5 58 135-194 109-174 (443)
319 PF00004 AAA: ATPase family as 36.4 1.3E+02 0.0029 20.6 5.5 55 87-152 1-56 (132)
320 TIGR01425 SRP54_euk signal rec 36.1 1.7E+02 0.0037 25.9 6.8 68 107-189 178-247 (429)
321 cd07208 Pat_hypo_Ecoli_yjju_li 34.6 41 0.00089 27.3 2.9 21 161-181 30-50 (266)
322 KOG4231 Intracellular membrane 34.5 55 0.0012 29.1 3.6 18 161-178 453-470 (763)
323 PF06500 DUF1100: Alpha/beta h 34.4 47 0.001 28.9 3.2 63 274-341 188-255 (411)
324 TIGR00174 miaA tRNA isopenteny 34.2 1.4E+02 0.003 24.8 5.7 73 87-166 2-97 (287)
325 cd07232 Pat_PLPL Patain-like p 34.1 33 0.00071 30.0 2.3 27 159-185 96-122 (407)
326 PF14403 CP_ATPgrasp_2: Circul 34.1 53 0.0011 29.0 3.5 88 73-168 177-277 (445)
327 TIGR00067 glut_race glutamate 33.9 1.3E+02 0.0028 24.3 5.5 46 292-339 12-57 (251)
328 PRK05579 bifunctional phosphop 33.6 3.3E+02 0.0072 23.9 9.3 57 102-165 137-196 (399)
329 COG0426 FpaA Uncharacterized f 33.3 1.7E+02 0.0037 25.4 6.2 75 84-183 249-332 (388)
330 cd07229 Pat_TGL3_like Triacylg 33.2 47 0.001 28.8 3.0 25 159-183 112-136 (391)
331 TIGR02816 pfaB_fam PfaB family 32.2 54 0.0012 29.9 3.4 21 159-179 266-286 (538)
332 COG0324 MiaA tRNA delta(2)-iso 32.0 2.8E+02 0.0062 23.2 7.1 76 84-166 3-101 (308)
333 KOG1252 Cystathionine beta-syn 31.9 3.2E+02 0.007 23.2 8.1 58 62-121 188-249 (362)
334 KOG1200 Mitochondrial/plastidi 31.9 2.5E+02 0.0053 21.9 6.2 33 86-121 16-48 (256)
335 cd07218 Pat_iPLA2 Calcium-inde 31.8 88 0.0019 25.1 4.2 20 161-180 33-52 (245)
336 COG3933 Transcriptional antite 31.7 2.8E+02 0.006 24.6 7.1 74 83-175 109-182 (470)
337 PF00578 AhpC-TSA: AhpC/TSA fa 31.5 1.6E+02 0.0035 20.0 5.2 58 57-119 5-67 (124)
338 PRK14194 bifunctional 5,10-met 31.3 87 0.0019 26.0 4.1 38 139-178 143-182 (301)
339 PF01734 Patatin: Patatin-like 31.2 1E+02 0.0022 23.0 4.5 20 159-178 28-47 (204)
340 PRK11613 folP dihydropteroate 30.7 3.1E+02 0.0067 22.7 7.8 58 101-172 166-225 (282)
341 TIGR00632 vsr DNA mismatch end 30.6 1.1E+02 0.0023 21.3 3.8 14 104-117 100-113 (117)
342 PF03976 PPK2: Polyphosphate k 30.6 26 0.00056 27.7 1.0 38 83-120 30-68 (228)
343 PF12780 AAA_8: P-loop contain 30.6 2.2E+02 0.0048 23.3 6.3 54 86-152 34-87 (268)
344 PRK06171 sorbitol-6-phosphate 30.0 1.4E+02 0.003 24.0 5.3 33 86-121 11-43 (266)
345 PF14253 AbiH: Bacteriophage a 29.8 26 0.00056 28.5 1.0 16 158-173 235-250 (270)
346 KOG1752 Glutaredoxin and relat 29.6 1.6E+02 0.0034 20.0 4.5 74 83-179 14-90 (104)
347 TIGR01626 ytfJ_HI0045 conserve 29.6 2.6E+02 0.0056 21.4 8.4 56 63-119 40-102 (184)
348 cd07231 Pat_SDP1-like Sugar-De 29.3 60 0.0013 27.2 2.9 21 159-179 97-117 (323)
349 PHA02114 hypothetical protein 29.2 94 0.002 20.5 3.2 35 83-118 82-116 (127)
350 COG0813 DeoD Purine-nucleoside 29.1 1.2E+02 0.0027 23.7 4.3 41 155-197 53-97 (236)
351 COG1448 TyrB Aspartate/tyrosin 28.8 3.9E+02 0.0085 23.2 7.9 88 82-191 170-263 (396)
352 COG1255 Uncharacterized protei 28.5 56 0.0012 22.5 2.2 21 100-120 25-45 (129)
353 cd07217 Pat17_PNPLA8_PNPLA9_li 28.4 54 0.0012 27.9 2.6 18 161-178 44-61 (344)
354 COG0505 CarA Carbamoylphosphat 28.2 3E+02 0.0064 23.6 6.6 65 101-176 191-267 (368)
355 COG0331 FabD (acyl-carrier-pro 28.2 80 0.0017 26.4 3.5 21 157-177 84-104 (310)
356 PF02230 Abhydrolase_2: Phosph 28.1 2.1E+02 0.0046 22.2 5.8 58 83-148 155-214 (216)
357 cd07206 Pat_TGL3-4-5_SDP1 Tria 27.8 68 0.0015 26.6 3.0 23 159-181 98-120 (298)
358 PRK10867 signal recognition pa 27.3 4.5E+02 0.0098 23.4 8.3 66 108-188 180-247 (433)
359 PLN02752 [acyl-carrier protein 26.8 88 0.0019 26.6 3.7 18 160-177 126-143 (343)
360 PLN02735 carbamoyl-phosphate s 26.3 2.9E+02 0.0064 28.2 7.5 100 69-177 557-667 (1102)
361 COG0218 Predicted GTPase [Gene 26.3 31 0.00068 26.4 0.8 26 269-294 129-154 (200)
362 PF01012 ETF: Electron transfe 26.2 2.7E+02 0.0058 20.5 6.6 63 102-179 49-113 (164)
363 PF05724 TPMT: Thiopurine S-me 26.1 72 0.0016 25.1 2.8 29 86-120 40-68 (218)
364 PF03575 Peptidase_S51: Peptid 26.1 70 0.0015 23.3 2.6 12 160-171 70-81 (154)
365 cd07213 Pat17_PNPLA8_PNPLA9_li 26.1 61 0.0013 26.7 2.5 19 161-179 37-55 (288)
366 cd03129 GAT1_Peptidase_E_like 26.0 3.2E+02 0.0068 21.2 7.4 38 83-120 29-66 (210)
367 PF05577 Peptidase_S28: Serine 25.8 1.1E+02 0.0023 27.1 4.2 40 276-320 377-416 (434)
368 cd07211 Pat_PNPLA8 Patatin-lik 25.7 57 0.0012 27.2 2.3 17 161-177 44-60 (308)
369 PRK09936 hypothetical protein; 25.6 2E+02 0.0042 23.8 5.0 27 100-126 40-66 (296)
370 PTZ00445 p36-lilke protein; Pr 25.4 2.3E+02 0.005 22.3 5.2 65 100-168 31-102 (219)
371 COG3887 Predicted signaling pr 24.8 2.3E+02 0.0049 26.2 5.7 49 138-191 322-376 (655)
372 COG1832 Predicted CoA-binding 24.7 1.8E+02 0.0039 20.9 4.2 32 89-120 21-52 (140)
373 PF09370 TIM-br_sig_trns: TIM- 24.7 1.5E+02 0.0033 24.1 4.2 84 102-192 161-249 (268)
374 cd01819 Patatin_and_cPLA2 Pata 24.5 1.3E+02 0.0029 21.9 3.9 18 159-176 29-46 (155)
375 COG2230 Cfa Cyclopropane fatty 24.5 1.8E+02 0.0038 24.1 4.7 48 138-189 57-104 (283)
376 cd04951 GT1_WbdM_like This fam 24.3 4.2E+02 0.0092 22.1 9.0 36 86-121 3-39 (360)
377 KOG1969 DNA replication checkp 24.3 3.4E+02 0.0075 26.0 6.8 36 81-119 323-359 (877)
378 PRK05665 amidotransferase; Pro 24.2 2.1E+02 0.0046 22.9 5.1 36 135-176 73-108 (240)
379 PTZ00317 NADP-dependent malic 24.2 1.1E+02 0.0024 27.9 3.8 82 86-175 299-399 (559)
380 TIGR02069 cyanophycinase cyano 24.1 3.3E+02 0.0072 22.0 6.2 35 280-314 3-37 (250)
381 PRK09437 bcp thioredoxin-depen 24.0 2.8E+02 0.0061 20.0 5.8 57 57-118 10-71 (154)
382 PRK13256 thiopurine S-methyltr 23.9 72 0.0016 25.2 2.4 29 86-120 46-74 (226)
383 TIGR03127 RuMP_HxlB 6-phospho 23.8 1.5E+02 0.0034 22.1 4.2 32 86-118 32-63 (179)
384 COG4850 Uncharacterized conser 23.7 2.5E+02 0.0055 23.7 5.4 38 155-192 275-314 (373)
385 PRK00131 aroK shikimate kinase 23.7 92 0.002 22.9 3.0 33 84-119 4-37 (175)
386 PF03853 YjeF_N: YjeF-related 23.6 1.1E+02 0.0024 22.8 3.3 33 83-116 25-57 (169)
387 COG0552 FtsY Signal recognitio 23.5 4.7E+02 0.01 22.3 8.5 75 106-189 216-292 (340)
388 PF01075 Glyco_transf_9: Glyco 23.2 1.2E+02 0.0025 24.1 3.6 36 82-117 104-143 (247)
389 cd07204 Pat_PNPLA_like Patatin 23.2 88 0.0019 25.0 2.9 20 161-180 34-53 (243)
390 PRK13529 malate dehydrogenase; 22.9 1.3E+02 0.0028 27.5 4.0 37 86-122 297-340 (563)
391 PTZ00256 glutathione peroxidas 22.8 2.5E+02 0.0055 21.2 5.2 57 57-119 20-82 (183)
392 PF02882 THF_DHG_CYH_C: Tetrah 22.7 1.8E+02 0.004 21.5 4.2 41 136-178 17-59 (160)
393 COG3640 CooC CO dehydrogenase 22.1 1.3E+02 0.0029 24.0 3.4 34 86-119 2-37 (255)
394 PF13439 Glyco_transf_4: Glyco 22.0 3.1E+02 0.0067 19.7 5.6 23 99-121 17-39 (177)
395 KOG2872 Uroporphyrinogen decar 21.8 1.3E+02 0.0027 24.8 3.3 30 83-120 252-281 (359)
396 KOG2170 ATPase of the AAA+ sup 21.8 93 0.002 25.9 2.6 19 81-99 107-125 (344)
397 KOG2728 Uncharacterized conser 21.3 3.4E+02 0.0073 21.9 5.4 52 58-120 31-82 (302)
398 PRK06523 short chain dehydroge 21.3 2.6E+02 0.0056 22.3 5.3 32 86-120 11-42 (260)
399 cd01983 Fer4_NifH The Fer4_Nif 21.2 1.3E+02 0.0029 19.0 3.1 19 100-118 16-34 (99)
400 PRK07053 glutamine amidotransf 21.2 4.3E+02 0.0093 21.1 9.1 82 84-176 4-100 (234)
401 PRK10964 ADP-heptose:LPS hepto 21.2 1.7E+02 0.0037 24.5 4.3 34 83-116 178-215 (322)
402 PRK00889 adenylylsulfate kinas 21.2 1.8E+02 0.0039 21.6 4.1 36 84-119 4-40 (175)
403 TIGR00959 ffh signal recogniti 21.2 5.9E+02 0.013 22.7 7.8 69 106-189 177-247 (428)
404 cd02022 DPCK Dephospho-coenzym 21.2 1.1E+02 0.0023 23.0 2.8 34 86-122 1-34 (179)
405 PF00091 Tubulin: Tubulin/FtsZ 21.2 2.7E+02 0.0058 21.8 5.2 53 138-192 106-166 (216)
406 PF03358 FMN_red: NADPH-depend 21.1 40 0.00087 24.4 0.5 37 86-122 3-42 (152)
407 COG0482 TrmU Predicted tRNA(5- 21.1 4E+02 0.0087 22.9 6.2 61 83-151 4-64 (356)
408 PRK13230 nitrogenase reductase 21.1 1.1E+02 0.0024 25.0 3.2 40 85-125 3-43 (279)
409 COG0859 RfaF ADP-heptose:LPS h 20.9 1.6E+02 0.0036 24.9 4.2 35 83-117 175-214 (334)
410 PF03721 UDPG_MGDP_dh_N: UDP-g 20.9 1.1E+02 0.0025 23.2 2.9 29 88-120 4-32 (185)
411 cd00765 Pyrophosphate_PFK Phos 20.8 3.4E+02 0.0073 25.1 6.1 91 84-177 168-264 (550)
412 PF03610 EIIA-man: PTS system 20.7 2.9E+02 0.0062 18.8 7.0 75 85-177 2-77 (116)
413 cd07216 Pat17_PNPLA8_PNPLA9_li 20.5 70 0.0015 26.7 1.9 17 161-177 45-61 (309)
414 TIGR03607 patatin-related prot 20.2 1.4E+02 0.0031 28.5 3.9 18 160-177 68-85 (739)
415 PF04204 HTS: Homoserine O-suc 20.2 1.5E+02 0.0032 24.7 3.5 37 136-178 117-153 (298)
416 PRK12828 short chain dehydroge 20.1 1.5E+02 0.0032 23.2 3.6 31 86-119 9-39 (239)
417 COG1506 DAP2 Dipeptidyl aminop 20.1 3.4E+02 0.0074 25.5 6.4 41 83-123 551-593 (620)
418 KOG1209 1-Acyl dihydroxyaceton 20.0 1.9E+02 0.0042 22.8 3.8 35 84-120 7-41 (289)
419 COG1225 Bcp Peroxiredoxin [Pos 20.0 3.7E+02 0.0081 19.9 6.0 60 54-118 7-71 (157)
No 1
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=4.5e-50 Score=336.14 Aligned_cols=343 Identities=78% Similarity=1.235 Sum_probs=268.2
Q ss_pred CcccccCCCCCchhhhHHHHhhcccchhhhHHHHHHhhhhhccccccccccCCCccceeeEEecCCCceeEEEEeccCCC
Q 018984 1 MAAAKLKFPGISDELSEILDAKMDEAPARRRAREAFKDIQLNIDHILLKATCDGLKTEESYEVNSRGVEIFCKSWLPETS 80 (348)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~ 80 (348)
+++++.+++++++||..+..++++..+++++.+.++.+++...++.++.+++.++.+++.++.+.+|.+|+|..|.|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~ 84 (349)
T PLN02385 5 VAKAPSAIEGVSEELNRILDANLDEAPARRRARDAFKDIQLQLDHCLFKTPPSGIKTEESYEVNSRGVEIFSKSWLPENS 84 (349)
T ss_pred cccCcccccccccHHHHHHHHHhhhhhhhchhhhhcccccccccchhhccCccCcceeeeeEEcCCCCEEEEEEEecCCC
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred CCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCe
Q 018984 81 QPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPS 160 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 160 (348)
.++++|||+||++++...+|..++..|+++||+|+++|+||||.|+++.....+++++++|+.++++.+......+..++
T Consensus 85 ~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~ 164 (349)
T PLN02385 85 RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPS 164 (349)
T ss_pred CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCE
Confidence 67899999999998876557889999988899999999999999987655556899999999999999876544455589
Q ss_pred EEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhh
Q 018984 161 FLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNREL 240 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (348)
+|+||||||.+++.++.++|++++++|+++|.........+..........+....+.........+....+........
T Consensus 165 ~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T PLN02385 165 FLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKM 244 (349)
T ss_pred EEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHH
Confidence 99999999999999999999999999999987654433333333333333333333322221111111111211111111
Q ss_pred hhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCccccc
Q 018984 241 TKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 320 (348)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 320 (348)
.......+...........++....+....+.++++|+|+++|++|.++|.+.++.+++.+..+++++++++++||.++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~ 324 (349)
T PLN02385 245 AEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILE 324 (349)
T ss_pred hhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeeccc
Confidence 11111222223334444455554445667788999999999999999999999999999886677899999999999999
Q ss_pred CCChhHHHHHHHHHHHHHhhhcC
Q 018984 321 GEPDDMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 321 ~~~~~~~~~~~~~i~~fl~~~~~ 343 (348)
++|+++...+++.|.+||++++.
T Consensus 325 e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 325 GEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCChhhHHHHHHHHHHHHHHhcc
Confidence 99998888899999999999875
No 2
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=4e-44 Score=273.53 Aligned_cols=294 Identities=51% Similarity=0.911 Sum_probs=273.2
Q ss_pred ccccCCCccceeeEEecCCCceeEEEEeccCCC-CCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCC
Q 018984 48 LKATCDGLKTEESYEVNSRGVEIFCKSWLPETS-QPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSA 126 (348)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~ 126 (348)
.......+.....++++.+|.++.+..|.|.++ +++..|+++||++......|..++..|+..||.|+++|++|||.|+
T Consensus 18 ~~~~~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~Sd 97 (313)
T KOG1455|consen 18 EYYGDGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSD 97 (313)
T ss_pred hhcCCCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCC
Confidence 334455666888999999999999999999764 6788999999999887666888999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHH
Q 018984 127 GLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVK 206 (348)
Q Consensus 127 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 206 (348)
+...+..+++..++|+...++.+..+...++.+..++||||||.+++.++.+.|+..+|+|+++|.....+...+.+...
T Consensus 98 Gl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~ 177 (313)
T KOG1455|consen 98 GLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVI 177 (313)
T ss_pred CCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHH
Confidence 99999899999999999999999888888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCC
Q 018984 207 QILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGEND 286 (348)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 286 (348)
..+..+...++..+..+........+++...+.....+...+...+++....++++...++.+.+.++++|.+++||++|
T Consensus 178 ~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD 257 (313)
T KOG1455|consen 178 SILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDD 257 (313)
T ss_pred HHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCC
Confidence 99999999999999888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 287 TVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
.++.+..++.+++...+.++++.+|||.-|.++...+++..+.+...|.+||+++
T Consensus 258 ~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 258 KVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999998899999999999999998777777889999999999987
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.6e-40 Score=277.14 Aligned_cols=292 Identities=43% Similarity=0.815 Sum_probs=205.4
Q ss_pred CccceeeEEecCCCceeEEEEeccCCC-CCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCC
Q 018984 54 GLKTEESYEVNSRGVEIFCKSWLPETS-QPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYI 132 (348)
Q Consensus 54 ~~~~~~~~~~~~~g~~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~ 132 (348)
++..+..++...||.+|+|+.|.|.+. .++++|||+||++.+....|..++..|+++||+|+++|+||||.|++.....
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~ 108 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYV 108 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccC
Confidence 345667788889999999999987643 4578999999998665434667788898899999999999999998655544
Q ss_pred CChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHH
Q 018984 133 PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGI 212 (348)
Q Consensus 133 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 212 (348)
.+++.+++|+.++++.+.......+.+++|+||||||.+++.++.++|++|+++|+++|.........+.+........+
T Consensus 109 ~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T PLN02298 109 PNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFV 188 (330)
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHH
Confidence 68899999999999999875444455899999999999999999999999999999998765443322222222222223
Q ss_pred HhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHH
Q 018984 213 ANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS 292 (348)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 292 (348)
....+..............................+......................+.++++|+|+++|++|.++|.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~ 268 (330)
T PLN02298 189 ARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPD 268 (330)
T ss_pred HHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHH
Confidence 33332211111000000000000000011111111222222222333333333345678899999999999999999999
Q ss_pred HHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcCCC
Q 018984 293 VSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSS 345 (348)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 345 (348)
.++.+++.++.+++++++++++||.++.++|+...+.+.+.+.+||.+++...
T Consensus 269 ~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 269 VSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred HHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 99999988866689999999999999999998877889999999999988543
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=2.4e-36 Score=246.23 Aligned_cols=270 Identities=26% Similarity=0.446 Sum_probs=184.1
Q ss_pred eEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHH
Q 018984 60 SYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLV 139 (348)
Q Consensus 60 ~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 139 (348)
.+++..||.+|.|+.|.|. ..++++|+++||++++... |..+++.|+++||+|+++|+||||.|+.......++.+++
T Consensus 3 ~~~~~~~g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~-~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 3 NCMFNLDNDYIYCKYWKPI-TYPKALVFISHGAGEHSGR-YEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred ceeecCCCCEEEEEeccCC-CCCCEEEEEeCCCccccch-HHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 3677889999999999886 3456888888999988775 8999999999999999999999999976443334777888
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHh-hcCC
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN-ILPK 218 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 218 (348)
+|+.+.++.+... .+..+++|+||||||.+++.+|.++|++++++|+++|...... . ............ ..+.
T Consensus 81 ~d~~~~l~~~~~~--~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~-~---~~~~~~~~~~~~~~~~~ 154 (276)
T PHA02857 81 RDVVQHVVTIKST--YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA-V---PRLNLLAAKLMGIFYPN 154 (276)
T ss_pred HHHHHHHHHHHhh--CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc-c---cHHHHHHHHHHHHhCCC
Confidence 8888888877543 2344899999999999999999999999999999998754211 1 111111111111 1111
Q ss_pred CcccCCCchhHHHHhchh-hhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHH
Q 018984 219 HKLVPQKDLAEAAFRDLK-NRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKAL 297 (348)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 297 (348)
.. .. .+......... .............................+....+.++++|+|+++|++|.++|++.++.+
T Consensus 155 ~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l 231 (276)
T PHA02857 155 KI-VG--KLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYF 231 (276)
T ss_pred Cc-cC--CCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHH
Confidence 10 00 00001110000 0000001111111111111122222223344567889999999999999999999999999
Q ss_pred HHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 298 YEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 298 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
.+.+. +++++.+++++||.++.|+++ ..+++++.+.+||+++.
T Consensus 232 ~~~~~-~~~~~~~~~~~gH~~~~e~~~-~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 232 MQHAN-CNREIKIYEGAKHHLHKETDE-VKKSVMKEIETWIFNRV 274 (276)
T ss_pred HHHcc-CCceEEEeCCCcccccCCchh-HHHHHHHHHHHHHHHhc
Confidence 88874 368999999999999998774 35679999999999874
No 5
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=1.1e-34 Score=243.31 Aligned_cols=285 Identities=31% Similarity=0.551 Sum_probs=195.7
Q ss_pred CCCccceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCC
Q 018984 52 CDGLKTEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGY 131 (348)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~ 131 (348)
..+.......+...+|..+++..|.|..+.++++|||+||++++... |..+++.|+++||+|+++|+||||.|++...+
T Consensus 105 ~~g~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~-~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~ 183 (395)
T PLN02652 105 GEGTRWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGR-YLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGY 183 (395)
T ss_pred CCCceEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHH-HHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC
Confidence 44555677788899999999999999766678899999999988665 78899999999999999999999999877665
Q ss_pred CCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCC---CCcceEEEeCccccccccCCChHHHHHH
Q 018984 132 IPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP---NAWSGAILVAPMCKIADDMVPPFLVKQI 208 (348)
Q Consensus 132 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 208 (348)
..+++.+++|+.++++.+..+ .++.+++++||||||.+++.++. +| ++++++|+.+|....... .......
T Consensus 184 ~~~~~~~~~Dl~~~l~~l~~~--~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~---~~~~~~~ 257 (395)
T PLN02652 184 VPSLDYVVEDTEAFLEKIRSE--NPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA---HPIVGAV 257 (395)
T ss_pred CcCHHHHHHHHHHHHHHHHHh--CCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc---hHHHHHH
Confidence 568889999999999999865 23447999999999999998764 55 479999999987653321 1111111
Q ss_pred HHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCc
Q 018984 209 LIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTV 288 (348)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 288 (348)
........+................+.............+......................+.++++|+|+++|++|.+
T Consensus 258 ~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~v 337 (395)
T PLN02652 258 APIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRV 337 (395)
T ss_pred HHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCC
Confidence 11122222221111000000000000000000000011111111122222233333334567889999999999999999
Q ss_pred CCHHHHHHHHHHhcCCCceEEEcCCCCcccccC-CChhHHHHHHHHHHHHHhhhcCCCCC
Q 018984 289 TDPSVSKALYEKASSKDKKCILYKDAFHSLLEG-EPDDMIIRVFADIISWLDDHSRSSTD 347 (348)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~~~~~i~~fl~~~~~~~~~ 347 (348)
+|++.++.+++.+...+++++++++++|.++.+ ++++ +++.+.+||..++...+.
T Consensus 338 vp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~----v~~~I~~FL~~~~~~~~~ 393 (395)
T PLN02652 338 TDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREE----VGRDIIDWMEKRLDLVNG 393 (395)
T ss_pred CCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHH----HHHHHHHHHHHHhhcccC
Confidence 999999999998765678999999999998776 4555 999999999998875543
No 6
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-34 Score=238.39 Aligned_cols=264 Identities=20% Similarity=0.268 Sum_probs=172.5
Q ss_pred eEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCC------CCCC
Q 018984 60 SYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLH------GYIP 133 (348)
Q Consensus 60 ~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~------~~~~ 133 (348)
....+.+|.+++|...++ +.++|||+||++++... |..+.+.|+++ |+|+++|+||||.|+.+. ...+
T Consensus 10 ~~~~~~~~~~i~y~~~G~----~~~~vlllHG~~~~~~~-w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~ 83 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGT----SGPALVLVHGFGGNADH-WRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFY 83 (294)
T ss_pred CceEEEcCeEEEEEEcCC----CCCeEEEECCCCCChhH-HHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccC
Confidence 335566899999987642 24689999999999886 89999999876 799999999999998653 1246
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHH
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIA 213 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (348)
+++++++++.++++.+..+ +++++||||||.+++.+|.++|++|+++|++++....................+.
T Consensus 84 ~~~~~a~~l~~~l~~l~~~------~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PLN02824 84 TFETWGEQLNDFCSDVVGD------PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQ 157 (294)
T ss_pred CHHHHHHHHHHHHHHhcCC------CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHH
Confidence 8999999999999998765 8999999999999999999999999999999976432111101111111111111
Q ss_pred hhcCCCcc-------cCCCchhHHHH----hchh--hhhhhhcccccccCCcchHHHHHHHH--hhHHHHHhccCCCCcE
Q 018984 214 NILPKHKL-------VPQKDLAEAAF----RDLK--NRELTKYNVIVYKDKPRLRTALELLK--TTEGIERRLEKVSLPL 278 (348)
Q Consensus 214 ~~~~~~~~-------~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~ 278 (348)
..+..... ..........+ .... .......................+.. ........+.++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (294)
T PLN02824 158 NLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPV 237 (294)
T ss_pred HHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCe
Confidence 11100000 00000000000 0000 00000000000000001111111111 1112234578899999
Q ss_pred EEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 279 LILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 279 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
|+|+|++|.++|.+.++.+.+.. ++.++++++++||+++.|+|++ +.+.|.+|++++
T Consensus 238 lvi~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~ 294 (294)
T PLN02824 238 LIAWGEKDPWEPVELGRAYANFD--AVEDFIVLPGVGHCPQDEAPEL----VNPLIESFVARH 294 (294)
T ss_pred EEEEecCCCCCChHHHHHHHhcC--CccceEEeCCCCCChhhhCHHH----HHHHHHHHHhcC
Confidence 99999999999999888876665 6789999999999999999999 999999999764
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=1e-33 Score=235.23 Aligned_cols=276 Identities=20% Similarity=0.271 Sum_probs=183.6
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCC-----C
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHG-----Y 131 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-----~ 131 (348)
.++..+...+|.+++|..+.+. .++++||++||++++... |..++..|+++||+|+++|+||||.|+.+.. .
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~-y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYVK-YAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHHH-HHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 4556777889999999999765 235789999999988765 7788888989999999999999999975421 2
Q ss_pred CCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHH
Q 018984 132 IPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIG 211 (348)
Q Consensus 132 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 211 (348)
..+++++++|+.++++.+... .+..+++++||||||.+++.++.++|++++++|+++|........ +..........
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~~~~~~~~~ 183 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSWMARRILNW 183 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcHHHHHHHHH
Confidence 247899999999999987543 233489999999999999999999999999999999876433222 11111111111
Q ss_pred HHhh---cCC-----CcccCCCch------hHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCc
Q 018984 212 IANI---LPK-----HKLVPQKDL------AEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLP 277 (348)
Q Consensus 212 ~~~~---~~~-----~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 277 (348)
.... ... ......... ....+.... ...... ................+.........+.++++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 261 (330)
T PRK10749 184 AEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNL-RFYADD-PELRVGGPTYHWVRESILAGEQVLAGAGDITTP 261 (330)
T ss_pred HHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHH-HHHHhC-CCcccCCCcHHHHHHHHHHHHHHHhhccCCCCC
Confidence 1111 000 000000000 000000000 000000 000000112222222222223344667889999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHHhcC-----CCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 278 LLILHGENDTVTDPSVSKALYEKASS-----KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 278 ~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
+|+|+|++|.+++.+.++.+++.++. +++++++++++||.++.|.++. .+.+++.|.+||+++
T Consensus 262 ~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~-r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 262 LLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAM-RSVALNAIVDFFNRH 329 (330)
T ss_pred EEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHH-HHHHHHHHHHHHhhc
Confidence 99999999999999998888887632 4568999999999999987743 456999999999875
No 8
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=100.00 E-value=1.2e-33 Score=228.11 Aligned_cols=284 Identities=28% Similarity=0.427 Sum_probs=201.2
Q ss_pred cceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCC-CCCCCCCC
Q 018984 56 KTEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSA-GLHGYIPS 134 (348)
Q Consensus 56 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~-~~~~~~~~ 134 (348)
...+..+...||..++|..|.+++.. ..+||++||++.+... |..++..|..+||.|+++|+||||.|. +..+...+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~~-~g~Vvl~HG~~Eh~~r-y~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEPP-KGVVVLVHGLGEHSGR-YEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCCC-CcEEEEecCchHHHHH-HHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 36778899999999999999876443 3799999999999887 778999999999999999999999998 66666667
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHh
Q 018984 135 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN 214 (348)
Q Consensus 135 ~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (348)
+.++.+|+..+++..... .+..+++++||||||.+++.++.+++.+|+++||.+|....................+..
T Consensus 86 f~~~~~dl~~~~~~~~~~--~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~ 163 (298)
T COG2267 86 FADYVDDLDAFVETIAEP--DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGR 163 (298)
T ss_pred HHHHHHHHHHHHHHHhcc--CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccc
Confidence 999999999999999864 345699999999999999999999999999999999998765400111111111122222
Q ss_pred hcCCCcccC---CCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhH-HHHHhccCCCCcEEEEecCCCCcCC
Q 018984 215 ILPKHKLVP---QKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTE-GIERRLEKVSLPLLILHGENDTVTD 290 (348)
Q Consensus 215 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P~l~i~g~~D~~~~ 290 (348)
..+...... .........++.........+..................... ........+++|+|+++|++|.+++
T Consensus 164 ~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~ 243 (298)
T COG2267 164 IRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVD 243 (298)
T ss_pred cccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCcccc
Confidence 222211111 011111111111111111112211222222233322222222 2334466789999999999999999
Q ss_pred -HHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcCC
Q 018984 291 -PSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 344 (348)
Q Consensus 291 -~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 344 (348)
.+...++++....+++++++++|+.|.++.|.+.. .+++++.+.+|+.++.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~-r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 244 NVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRA-REEVLKDILAWLAEALPS 297 (298)
T ss_pred CcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchH-HHHHHHHHHHHHHhhccC
Confidence 78888889998888899999999999999876653 367999999999988654
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=7.2e-34 Score=231.34 Aligned_cols=259 Identities=17% Similarity=0.138 Sum_probs=170.4
Q ss_pred EecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHH
Q 018984 62 EVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDD 141 (348)
Q Consensus 62 ~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d 141 (348)
+...+|.+++|..... +...++|||+||++++... |..+.+.|.+ +|+|+++|+||||.|+.+.. .+++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~--~~~~~plvllHG~~~~~~~-w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~ 80 (276)
T TIGR02240 6 TIDLDGQSIRTAVRPG--KEGLTPLLIFNGIGANLEL-VFPFIEALDP-DLEVIAFDVPGVGGSSTPRH-PYRFPGLAKL 80 (276)
T ss_pred EeccCCcEEEEEEecC--CCCCCcEEEEeCCCcchHH-HHHHHHHhcc-CceEEEECCCCCCCCCCCCC-cCcHHHHHHH
Confidence 3566899999977531 2224689999999998886 8889999865 59999999999999986543 3589999999
Q ss_pred HHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcc
Q 018984 142 VIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKL 221 (348)
Q Consensus 142 ~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (348)
+.++++++... +++|+||||||.+++.+|.++|++|+++|++++................... ........
T Consensus 81 ~~~~i~~l~~~------~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 151 (276)
T TIGR02240 81 AARMLDYLDYG------QVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMAS-PRRYIQPS-- 151 (276)
T ss_pred HHHHHHHhCcC------ceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcC-chhhhccc--
Confidence 99999998765 8999999999999999999999999999999987642211111111000000 00000000
Q ss_pred cCCCchhHHHHhchhh--hhhhhcccccccCCcchHHHHHHHHh-hHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHH
Q 018984 222 VPQKDLAEAAFRDLKN--RELTKYNVIVYKDKPRLRTALELLKT-TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALY 298 (348)
Q Consensus 222 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 298 (348)
.........+..... .......................... ..+....+.++++|+|+|+|++|+++|++..+.+.
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~ 230 (276)
T TIGR02240 152 -HGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLA 230 (276)
T ss_pred -cccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHH
Confidence 000000000000000 00000000000000111111111110 11123457899999999999999999999999999
Q ss_pred HHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 299 EKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 299 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
+.+ ++++++++++ ||+++.++|++ +.+.|.+|+++.-
T Consensus 231 ~~~--~~~~~~~i~~-gH~~~~e~p~~----~~~~i~~fl~~~~ 267 (276)
T TIGR02240 231 WRI--PNAELHIIDD-GHLFLITRAEA----VAPIIMKFLAEER 267 (276)
T ss_pred HhC--CCCEEEEEcC-CCchhhccHHH----HHHHHHHHHHHhh
Confidence 888 7889999985 99999999998 9999999998653
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2e-33 Score=231.69 Aligned_cols=253 Identities=15% Similarity=0.146 Sum_probs=162.1
Q ss_pred ceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCC-CCCChhHHHHHHHHHH
Q 018984 68 VEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHG-YIPSFDRLVDDVIEHY 146 (348)
Q Consensus 68 ~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~d~~~~l 146 (348)
.+|+|...+++ ..|+|||+||++++... |..+++.|.++||+|+++|+||||.|+.+.. ..++++++++++.+++
T Consensus 34 ~~i~y~~~G~~---~~~~lvliHG~~~~~~~-w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l 109 (302)
T PRK00870 34 LRMHYVDEGPA---DGPPVLLLHGEPSWSYL-YRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWF 109 (302)
T ss_pred EEEEEEecCCC---CCCEEEEECCCCCchhh-HHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence 67888876432 24689999999988776 8899999987899999999999999976542 3468999999999999
Q ss_pred HHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHH--------HHhhcCC
Q 018984 147 SNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIG--------IANILPK 218 (348)
Q Consensus 147 ~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 218 (348)
+++... +++++||||||.+++.+|.++|++|+++|++++........... ........ +......
T Consensus 110 ~~l~~~------~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 182 (302)
T PRK00870 110 EQLDLT------DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPD-AFWAWRAFSQYSPVLPVGRLVNG 182 (302)
T ss_pred HHcCCC------CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchH-HHhhhhcccccCchhhHHHHhhc
Confidence 988665 89999999999999999999999999999998753221110000 00000000 0000000
Q ss_pred Ccc-cCCCchhHHHHhchhhhhhhhcc--cccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHH
Q 018984 219 HKL-VPQKDLAEAAFRDLKNRELTKYN--VIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSK 295 (348)
Q Consensus 219 ~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 295 (348)
... .........+............. ............. ..........+.++++|+++|+|++|.++|... +
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~ 258 (302)
T PRK00870 183 GTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPA---VAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-A 258 (302)
T ss_pred cccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcc---hHHHHHHHHhhhcCCCceEEEecCCCCcccCch-H
Confidence 000 00000000000000000000000 0000000000000 000112234568899999999999999999766 7
Q ss_pred HHHHHhcCCCce---EEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 296 ALYEKASSKDKK---CILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 296 ~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
.+.+.+ ++.+ +++++++||+++.++|++ +.+.|.+|++++
T Consensus 259 ~~~~~~--~~~~~~~~~~i~~~gH~~~~e~p~~----~~~~l~~fl~~~ 301 (302)
T PRK00870 259 ILQKRI--PGAAGQPHPTIKGAGHFLQEDSGEE----LAEAVLEFIRAT 301 (302)
T ss_pred HHHhhc--ccccccceeeecCCCccchhhChHH----HHHHHHHHHhcC
Confidence 788777 4444 889999999999999998 999999999765
No 11
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.1e-33 Score=229.28 Aligned_cols=261 Identities=15% Similarity=0.208 Sum_probs=168.2
Q ss_pred EecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHH
Q 018984 62 EVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDD 141 (348)
Q Consensus 62 ~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d 141 (348)
+.+.+|.+++|..++ ..++|||+||++++... |..+++.|+++ ++|+++|+||||.|+.+... ++++++++|
T Consensus 11 ~~~~~g~~i~y~~~G-----~g~~vvllHG~~~~~~~-w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~-~~~~~~a~d 82 (295)
T PRK03592 11 RVEVLGSRMAYIETG-----EGDPIVFLHGNPTSSYL-WRNIIPHLAGL-GRCLAPDLIGMGASDKPDID-YTFADHARY 82 (295)
T ss_pred EEEECCEEEEEEEeC-----CCCEEEEECCCCCCHHH-HHHHHHHHhhC-CEEEEEcCCCCCCCCCCCCC-CCHHHHHHH
Confidence 345689999999874 23689999999988776 88999999877 59999999999999876543 689999999
Q ss_pred HHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcc
Q 018984 142 VIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKL 221 (348)
Q Consensus 142 ~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (348)
+.++++.+... +++++||||||.+|+.++.++|++|+++|++++....................+.........
T Consensus 83 l~~ll~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK03592 83 LDAWFDALGLD------DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEM 156 (295)
T ss_pred HHHHHHHhCCC------CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccccccc
Confidence 99999998765 899999999999999999999999999999998433211000011111111111110000000
Q ss_pred c-CCCchhHHHHhch-----hhhhhhhcccccccCCcchHHHH-------------HHHHhhHHHHHhccCCCCcEEEEe
Q 018984 222 V-PQKDLAEAAFRDL-----KNRELTKYNVIVYKDKPRLRTAL-------------ELLKTTEGIERRLEKVSLPLLILH 282 (348)
Q Consensus 222 ~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~P~l~i~ 282 (348)
. ....+....+... ......... ..+.......... .......+....+.++++|+|+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 235 (295)
T PRK03592 157 VLEENVFIERVLPGSILRPLSDEEMAVYR-RPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLIN 235 (295)
T ss_pred ccchhhHHhhcccCcccccCCHHHHHHHH-hhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEe
Confidence 0 0000000000000 000000000 0000000000000 000111223456788999999999
Q ss_pred cCCCCcCCHHHHHHHH-HHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcC
Q 018984 283 GENDTVTDPSVSKALY-EKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 283 g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 343 (348)
|++|.++++....++. +.. ++.++++++++||+++.++|++ +.+.|.+|+++...
T Consensus 236 G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----v~~~i~~fl~~~~~ 291 (295)
T PRK03592 236 AEPGAILTTGAIRDWCRSWP--NQLEITVFGAGLHFAQEDSPEE----IGAAIAAWLRRLRL 291 (295)
T ss_pred ccCCcccCcHHHHHHHHHhh--hhcceeeccCcchhhhhcCHHH----HHHHHHHHHHHhcc
Confidence 9999999554444444 444 6789999999999999999998 99999999987654
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=8e-33 Score=234.61 Aligned_cols=262 Identities=16% Similarity=0.243 Sum_probs=169.4
Q ss_pred EEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchh-HHHHHH---hCCceEEeecCCCCccCCCCCCCCCChh
Q 018984 61 YEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEG-TARKLA---SSGYGVFAMDYPGFGLSAGLHGYIPSFD 136 (348)
Q Consensus 61 ~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~l~---~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 136 (348)
...+.+|.+++|...+|.++..+|+|||+||++++... |.. +...|. +++|+|+++|+||||.|+.+....++++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~-W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~ 257 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAF-WTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLR 257 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHH-HHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHH
Confidence 34555668999999988765557899999999988776 653 445554 3689999999999999987654446899
Q ss_pred HHHHHHH-HHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhh
Q 018984 137 RLVDDVI-EHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANI 215 (348)
Q Consensus 137 ~~~~d~~-~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (348)
++++++. .+++.+... +++++||||||.+++.+|.++|++|+++|++++......... ....... ...
T Consensus 258 ~~a~~l~~~ll~~lg~~------k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~--~~~~~~~---~~~ 326 (481)
T PLN03087 258 EHLEMIERSVLERYKVK------SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGV--QATQYVM---RKV 326 (481)
T ss_pred HHHHHHHHHHHHHcCCC------CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccch--hHHHHHH---HHh
Confidence 9999984 788877655 899999999999999999999999999999997644322110 0000000 000
Q ss_pred cCCCc--ccCCCchhHHHHhchh----------------------hhhhhhcccccc---cCCcchHHHHHHHHh-----
Q 018984 216 LPKHK--LVPQKDLAEAAFRDLK----------------------NRELTKYNVIVY---KDKPRLRTALELLKT----- 263 (348)
Q Consensus 216 ~~~~~--~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~----- 263 (348)
..... ..........++.... ...........+ ...............
T Consensus 327 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l 406 (481)
T PLN03087 327 APRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKL 406 (481)
T ss_pred cccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhh
Confidence 00000 0000000000000000 000000000000 000000010001100
Q ss_pred hHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCccccc-CCChhHHHHHHHHHHHHHhh
Q 018984 264 TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE-GEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 264 ~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl~~ 340 (348)
.........++++|+|+|+|++|.++|++..+.+.+.+ +++++++++++||+++. ++|++ +++.|.+|...
T Consensus 407 ~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~p~~----fa~~L~~F~~~ 478 (481)
T PLN03087 407 DGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGRQKE----FARELEEIWRR 478 (481)
T ss_pred hhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcCHHH----HHHHHHHHhhc
Confidence 01122233478999999999999999999999999998 88999999999999885 89988 88889888754
No 13
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=217.72 Aligned_cols=265 Identities=20% Similarity=0.278 Sum_probs=174.0
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCC-CCCCh
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHG-YIPSF 135 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~ 135 (348)
..++.+.+.+|.+++|..-++. ..|+|+++||++.+.-. |+.....|+.+||+|+++|+||+|.|+.+.. ..|++
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~---~gP~illlHGfPe~wys-wr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~ 96 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPG---DGPIVLLLHGFPESWYS-WRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTI 96 (322)
T ss_pred hcceeeEEEccEEEEEEeecCC---CCCEEEEEccCCccchh-hhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeH
Confidence 4456677888888888876433 36899999999998776 8999999999999999999999999998876 66899
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHH----------
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLV---------- 205 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~---------- 205 (348)
..++.|+..+++.++.. +++++||+||+++|+.+|..+|++|+++|+++...... ...+....
T Consensus 97 ~~l~~di~~lld~Lg~~------k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p-~~~~~~~~~~~f~~~~y~ 169 (322)
T KOG4178|consen 97 DELVGDIVALLDHLGLK------KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNP-KLKPLDSSKAIFGKSYYI 169 (322)
T ss_pred HHHHHHHHHHHHHhccc------eeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCc-ccchhhhhccccCcccee
Confidence 99999999999999866 99999999999999999999999999999998665411 00000000
Q ss_pred ---------H-----HHHHHHHhhcCCCcc-----cCC-CchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhH
Q 018984 206 ---------K-----QILIGIANILPKHKL-----VPQ-KDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTE 265 (348)
Q Consensus 206 ---------~-----~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (348)
. .....+...+..... .+. ......+. ...........+ ....+...+..++...
T Consensus 170 ~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~----t~edi~~~~~~f-~~~g~~gplNyyrn~~ 244 (322)
T KOG4178|consen 170 CLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWL----TEEDIAFYVSKF-QIDGFTGPLNYYRNFR 244 (322)
T ss_pred EeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchh----hHHHHHHHHhcc-ccccccccchhhHHHh
Confidence 0 000000000000000 000 00000000 000000000000 0001111111111111
Q ss_pred H----HHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCc-eEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 266 G----IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDK-KCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 266 ~----~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
. ....+.++++|+++|+|+.|.+.+.....+.++..- ++. +.++++|+||+++.|+|++ +.+.+.+|+++
T Consensus 245 r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~v-p~l~~~vv~~~~gH~vqqe~p~~----v~~~i~~f~~~ 319 (322)
T KOG4178|consen 245 RNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDV-PRLTERVVIEGIGHFVQQEKPQE----VNQAILGFINS 319 (322)
T ss_pred hCchhccccccccccceEEEEecCcccccchhHHHHHHHhh-ccccceEEecCCcccccccCHHH----HHHHHHHHHHh
Confidence 1 123456889999999999999988763333343332 433 7888999999999999999 99999999987
Q ss_pred hc
Q 018984 341 HS 342 (348)
Q Consensus 341 ~~ 342 (348)
..
T Consensus 320 ~~ 321 (322)
T KOG4178|consen 320 FS 321 (322)
T ss_pred hc
Confidence 53
No 14
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=5.5e-33 Score=233.08 Aligned_cols=265 Identities=19% Similarity=0.289 Sum_probs=165.8
Q ss_pred ecCCCc-eeEEEEeccCC-CCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHH
Q 018984 63 VNSRGV-EIFCKSWLPET-SQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVD 140 (348)
Q Consensus 63 ~~~~g~-~l~~~~~~p~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 140 (348)
...+|. +++|...++.. .+..|+|||+||++++... |..++..|.+ +|+|+++|+||||.|+.+....++++++++
T Consensus 66 ~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~ 143 (360)
T PLN02679 66 WKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH-WRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAE 143 (360)
T ss_pred EEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHH-HHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHH
Confidence 344566 99998875431 1124789999999998776 8888898865 699999999999999876544468999999
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHH-hCCCCcceEEEeCccccccccC-CChHHHHH---HHHHHHhh
Q 018984 141 DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL-KQPNAWSGAILVAPMCKIADDM-VPPFLVKQ---ILIGIANI 215 (348)
Q Consensus 141 d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~-~~~~~~~~---~~~~~~~~ 215 (348)
++.++++.+..+ +++|+||||||.+++.++. .+|++|+++|++++........ ........ ....+...
T Consensus 144 ~l~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (360)
T PLN02679 144 LILDFLEEVVQK------PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFL 217 (360)
T ss_pred HHHHHHHHhcCC------CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHH
Confidence 999999988765 8999999999999999887 4799999999999764322111 00110000 00000000
Q ss_pred cCCCc-------ccCCCchhHHHHh----chh--hhhhhhcccccccCCcchHHHHHHHHh--hHHHHHhccCCCCcEEE
Q 018984 216 LPKHK-------LVPQKDLAEAAFR----DLK--NRELTKYNVIVYKDKPRLRTALELLKT--TEGIERRLEKVSLPLLI 280 (348)
Q Consensus 216 ~~~~~-------~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~ 280 (348)
..... ...........+. ... ........................... ..+....+.++++|+|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLi 297 (360)
T PLN02679 218 LKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILV 297 (360)
T ss_pred hhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEE
Confidence 00000 0000000000000 000 000000000000011111111111111 11223467789999999
Q ss_pred EecCCCCcCCHHH-----HHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 281 LHGENDTVTDPSV-----SKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 281 i~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
|+|++|.++|.+. ...+.+.+ +++++++++++||+++.|+|++ +.+.|.+||++.
T Consensus 298 i~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~E~Pe~----~~~~I~~FL~~~ 357 (360)
T PLN02679 298 LWGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHDDRPDL----VHEKLLPWLAQL 357 (360)
T ss_pred EEeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccccCHHH----HHHHHHHHHHhc
Confidence 9999999998763 22344445 7899999999999999999998 999999999763
No 15
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=8.6e-33 Score=222.21 Aligned_cols=240 Identities=17% Similarity=0.214 Sum_probs=157.0
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEE
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLF 163 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~ 163 (348)
-+|||+||++.+... |..+++.|.+.||+|+++|+||||.|+.+....++++++++|+.++++.+... ++++++
T Consensus 4 ~~vvllHG~~~~~~~-w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~-----~~~~lv 77 (255)
T PLN02965 4 IHFVFVHGASHGAWC-WYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD-----HKVILV 77 (255)
T ss_pred eEEEEECCCCCCcCc-HHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC-----CCEEEE
Confidence 359999999988775 88999999888999999999999999865444468999999999999987531 289999
Q ss_pred EeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhc----CCCcccCC------CchhHHHHh
Q 018984 164 GQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANIL----PKHKLVPQ------KDLAEAAFR 233 (348)
Q Consensus 164 GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~~~~~~~~ 233 (348)
||||||.+++.++.++|++|+++|++++............ ............ ........ ..+....+.
T Consensus 78 GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPR-LKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYY 156 (255)
T ss_pred ecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHH-HHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHh
Confidence 9999999999999999999999999998532111111111 110000000000 00000000 000000000
Q ss_pred chhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCC
Q 018984 234 DLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD 313 (348)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (348)
............ ............ ...+....+.++++|+++++|++|..+|++..+.+.+.+ ++++++++++
T Consensus 157 ~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i~~ 229 (255)
T PLN02965 157 NQSPLEDYTLSS-KLLRPAPVRAFQ----DLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVLED 229 (255)
T ss_pred cCCCHHHHHHHH-HhcCCCCCcchh----hhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEecC
Confidence 000000000000 000000000000 001122245578999999999999999999999999998 7889999999
Q ss_pred CCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 314 AFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 314 ~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
+||+++.|+|++ +.+.|.+|++..
T Consensus 230 ~GH~~~~e~p~~----v~~~l~~~~~~~ 253 (255)
T PLN02965 230 SDHSAFFSVPTT----LFQYLLQAVSSL 253 (255)
T ss_pred CCCchhhcCHHH----HHHHHHHHHHHh
Confidence 999999999999 888888887653
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=4.1e-32 Score=219.11 Aligned_cols=250 Identities=14% Similarity=0.190 Sum_probs=165.1
Q ss_pred eeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHH
Q 018984 69 EIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSN 148 (348)
Q Consensus 69 ~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 148 (348)
++.|+.+.+.+...+|+|||+||++++... |..+...|.+ +|+|+++|+||||.|..+.. ++++++++|+.+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~-~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDN-LGVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDA 77 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhH-HHHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHH
Confidence 466777666655567899999999988776 8888888854 59999999999999986544 4899999999999999
Q ss_pred HHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchh
Q 018984 149 IKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLA 228 (348)
Q Consensus 149 l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (348)
+... +++++||||||.+++.+|.++|++|+++|++++....... ... ......+..... .. .......
T Consensus 78 l~~~------~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---~~~-~~~~~~~~~~~~-~~-~~~~~~~ 145 (255)
T PRK10673 78 LQIE------KATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---RRH-DEIFAAINAVSE-AG-ATTRQQA 145 (255)
T ss_pred cCCC------ceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---hhh-HHHHHHHHHhhh-cc-cccHHHH
Confidence 8655 8999999999999999999999999999999753321110 000 011111110000 00 0000000
Q ss_pred HHHHhch-hhhhhhhcccccccCC---cchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCC
Q 018984 229 EAAFRDL-KNRELTKYNVIVYKDK---PRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK 304 (348)
Q Consensus 229 ~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 304 (348)
...+... ............+... .........+... .....+.++++|+|+|+|++|..++.+..+.+.+.+ +
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~ 222 (255)
T PRK10673 146 AAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHI-VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF--P 222 (255)
T ss_pred HHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHH-hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--C
Confidence 0011000 0000000000000000 0011111111110 011345678999999999999999999999888888 7
Q ss_pred CceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 305 DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 305 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
++++++++++||+++.++|++ +.+.+.+||.++
T Consensus 223 ~~~~~~~~~~gH~~~~~~p~~----~~~~l~~fl~~~ 255 (255)
T PRK10673 223 QARAHVIAGAGHWVHAEKPDA----VLRAIRRYLNDK 255 (255)
T ss_pred CcEEEEeCCCCCeeeccCHHH----HHHHHHHHHhcC
Confidence 899999999999999999998 999999999763
No 17
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.3e-32 Score=222.65 Aligned_cols=256 Identities=18% Similarity=0.230 Sum_probs=160.6
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChh
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFD 136 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 136 (348)
+...+ ...+|.+++|...+ ..++|||+||++.+... |..+...|.+ +|+|+++|+||||.|+.+....++++
T Consensus 14 ~~~~~-~~~~~~~i~y~~~G-----~~~~iv~lHG~~~~~~~-~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~ 85 (286)
T PRK03204 14 FESRW-FDSSRGRIHYIDEG-----TGPPILLCHGNPTWSFL-YRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQID 85 (286)
T ss_pred ccceE-EEcCCcEEEEEECC-----CCCEEEEECCCCccHHH-HHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHH
Confidence 44444 55578899988753 24689999999876655 7888888854 59999999999999987654446889
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhc
Q 018984 137 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANIL 216 (348)
Q Consensus 137 ~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (348)
++++++.++++.+... +++++||||||.+++.++..+|++|+++|++++........ .. ..........
T Consensus 86 ~~~~~~~~~~~~~~~~------~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~----~~~~~~~~~~ 154 (286)
T PRK03204 86 EHARVIGEFVDHLGLD------RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTL-AM----KAFSRVMSSP 154 (286)
T ss_pred HHHHHHHHHHHHhCCC------CEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCch-hH----HHHHHHhccc
Confidence 9999999999987655 89999999999999999999999999999988754211100 00 0000000000
Q ss_pred CCCc-ccCCCchhHHHHhchh----hhhhhhcccccccCCcchHHHHHH----HHhh----HHHHHhcc--CCCCcEEEE
Q 018984 217 PKHK-LVPQKDLAEAAFRDLK----NRELTKYNVIVYKDKPRLRTALEL----LKTT----EGIERRLE--KVSLPLLIL 281 (348)
Q Consensus 217 ~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~--~i~~P~l~i 281 (348)
.... ......+....+.... ......... .....+........ +... ......+. .+++|+++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI 233 (286)
T PRK03204 155 PVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYR-AVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLV 233 (286)
T ss_pred cchhhhhhhhHHHHHhccccccCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEE
Confidence 0000 0000000011110000 000000000 00000011111100 0000 01111111 128999999
Q ss_pred ecCCCCcCCHH-HHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHH
Q 018984 282 HGENDTVTDPS-VSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 338 (348)
Q Consensus 282 ~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 338 (348)
+|++|.++++. ..+.+.+.+ ++.++++++++||+++.|+|++ +.+.|.+||
T Consensus 234 ~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~e~Pe~----~~~~i~~~~ 285 (286)
T PRK03204 234 WGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQEDAPDR----IAAAIIERF 285 (286)
T ss_pred ecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccccCHHH----HHHHHHHhc
Confidence 99999988654 567778888 7899999999999999999998 889999987
No 18
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=100.00 E-value=4.7e-31 Score=218.36 Aligned_cols=269 Identities=23% Similarity=0.404 Sum_probs=181.7
Q ss_pred EecCCCceeEEEEeccCCCCCceeEEEEecCCCcccc-------------------------cchhHHHHHHhCCceEEe
Q 018984 62 EVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF-------------------------FFEGTARKLASSGYGVFA 116 (348)
Q Consensus 62 ~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~-------------------------~~~~~~~~l~~~g~~vi~ 116 (348)
+.+.||.+|+++.|.|+ .++.+|+++||++++... |...+++.|.++||.|++
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEE
Confidence 45678999999999875 457899999999988752 114678999999999999
Q ss_pred ecCCCCccCCCC---CCCCCChhHHHHHHHHHHHHHHcC-----------------CCCC-CCCeEEEEeChhHHHHHHH
Q 018984 117 MDYPGFGLSAGL---HGYIPSFDRLVDDVIEHYSNIKEY-----------------PEFR-TLPSFLFGQSLGGAVALKV 175 (348)
Q Consensus 117 ~D~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~-----------------~~~~-~~~v~l~GhS~Gg~~a~~~ 175 (348)
+|+||||.|.+. .....+++++++|+..+++.+... ...+ +.+++|+||||||.+++.+
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 999999999854 223348999999999999987541 0122 5689999999999999999
Q ss_pred HHhCCC--------CcceEEEeCccccccccC-----CChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhh
Q 018984 176 HLKQPN--------AWSGAILVAPMCKIADDM-----VPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTK 242 (348)
Q Consensus 176 a~~~p~--------~v~~~vl~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (348)
+.++++ .++++|+++|........ ............+....+......... ...+........
T Consensus 160 ~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~ 235 (332)
T TIGR01607 160 LELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIR----YEKSPYVNDIIK 235 (332)
T ss_pred HHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccc----cccChhhhhHHh
Confidence 876542 589999999876542211 011122222333333333322111000 001111111111
Q ss_pred cccccccCCcchHHHHHHHHhhHHHHHhccCC--CCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCccccc
Q 018984 243 YNVIVYKDKPRLRTALELLKTTEGIERRLEKV--SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 320 (348)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 320 (348)
.+...+...........++.........+..+ ++|+|+++|++|.+++++.++.+++.+..++++++++++++|.++.
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~ 315 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITI 315 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCcc
Confidence 12222222334445555555444444455556 7999999999999999999999888876678999999999999998
Q ss_pred CCChhHHHHHHHHHHHHHh
Q 018984 321 GEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 321 ~~~~~~~~~~~~~i~~fl~ 339 (348)
|... +.+.+.+.+||+
T Consensus 316 E~~~---~~v~~~i~~wL~ 331 (332)
T TIGR01607 316 EPGN---EEVLKKIIEWIS 331 (332)
T ss_pred CCCH---HHHHHHHHHHhh
Confidence 7532 239999999986
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=3.1e-31 Score=221.01 Aligned_cols=267 Identities=17% Similarity=0.175 Sum_probs=175.6
Q ss_pred cCCCccceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCC
Q 018984 51 TCDGLKTEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHG 130 (348)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~ 130 (348)
+..++++......+.+|.+++|...++. .+++|||+||++++... |+.++..|++ +|+|+++|+||||.|+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~y~~~G~~---~~~~ivllHG~~~~~~~-w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~ 172 (383)
T PLN03084 98 PIFGLKMGAQSQASSDLFRWFCVESGSN---NNPPVLLIHGFPSQAYS-YRKVLPVLSK-NYHAIAFDWLGFGFSDKPQP 172 (383)
T ss_pred ccccccccceeEEcCCceEEEEEecCCC---CCCeEEEECCCCCCHHH-HHHHHHHHhc-CCEEEEECCCCCCCCCCCcc
Confidence 4456677777888899999999886543 24789999999988776 8889999965 69999999999999987643
Q ss_pred ---CCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHH
Q 018984 131 ---YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQ 207 (348)
Q Consensus 131 ---~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 207 (348)
..++++++++++.++++.+... +++|+|||+||.+++.++.++|++|+++|++++.........+ .....
T Consensus 173 ~~~~~ys~~~~a~~l~~~i~~l~~~------~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p-~~l~~ 245 (383)
T PLN03084 173 GYGFNYTLDEYVSSLESLIDELKSD------KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLP-STLSE 245 (383)
T ss_pred cccccCCHHHHHHHHHHHHHHhCCC------CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccch-HHHHH
Confidence 2468999999999999998766 8999999999999999999999999999999987532211111 11111
Q ss_pred HHHHH-HhhcCCCcccCCCchhHHHHhch----hhhhhhhcccccccCCcc----hHHHHHHHHh-----hHHHHHhc--
Q 018984 208 ILIGI-ANILPKHKLVPQKDLAEAAFRDL----KNRELTKYNVIVYKDKPR----LRTALELLKT-----TEGIERRL-- 271 (348)
Q Consensus 208 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~~~~-- 271 (348)
+...+ ...+..... ......+... ............+..... .......+.. ..+....+
T Consensus 246 ~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~ 321 (383)
T PLN03084 246 FSNFLLGEIFSQDPL----RASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTD 321 (383)
T ss_pred HHHHHhhhhhhcchH----HHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhcc
Confidence 10000 000000000 0000000000 000000000000000000 0111111110 00111111
Q ss_pred cCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 272 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 272 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
.++++|+++++|++|.+++.+..+.+.+. .+.++++++++||+++.|+|++ +.+.|.+|+.+
T Consensus 322 ~~i~vPvLiI~G~~D~~v~~~~~~~~a~~---~~a~l~vIp~aGH~~~~E~Pe~----v~~~I~~Fl~~ 383 (383)
T PLN03084 322 KNWKTPITVCWGLRDRWLNYDGVEDFCKS---SQHKLIELPMAGHHVQEDCGEE----LGGIISGILSK 383 (383)
T ss_pred ccCCCCEEEEeeCCCCCcCHHHHHHHHHh---cCCeEEEECCCCCCcchhCHHH----HHHHHHHHhhC
Confidence 36899999999999999999888877775 3789999999999999999998 89999999863
No 20
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=1.1e-31 Score=219.93 Aligned_cols=256 Identities=19% Similarity=0.174 Sum_probs=159.1
Q ss_pred eeEEecCCC---ceeEEEEeccCCCCCceeEEEEecCCCcccccchh---HHHHHHhCCceEEeecCCCCccCCCCCCCC
Q 018984 59 ESYEVNSRG---VEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEG---TARKLASSGYGVFAMDYPGFGLSAGLHGYI 132 (348)
Q Consensus 59 ~~~~~~~~g---~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~---~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~ 132 (348)
+...++.+| .+++|... + ..|+|||+||++++... |.. ....|.+.||+|+++|+||||.|+.+....
T Consensus 8 ~~~~~~~~~~~~~~~~y~~~----g-~~~~ivllHG~~~~~~~-~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~ 81 (282)
T TIGR03343 8 KFVKINEKGLSNFRIHYNEA----G-NGEAVIMLHGGGPGAGG-WSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDE 81 (282)
T ss_pred eEEEcccccccceeEEEEec----C-CCCeEEEECCCCCchhh-HHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcc
Confidence 344455554 45777654 2 24679999999877654 432 345566778999999999999998653221
Q ss_pred CChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccC--CChHHHHHHHH
Q 018984 133 PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDM--VPPFLVKQILI 210 (348)
Q Consensus 133 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~ 210 (348)
......++++.++++.+..+ +++++||||||.+++.++.++|++++++|++++........ .+.........
T Consensus 82 ~~~~~~~~~l~~~l~~l~~~------~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 155 (282)
T TIGR03343 82 QRGLVNARAVKGLMDALDIE------KAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFK 155 (282)
T ss_pred cccchhHHHHHHHHHHcCCC------CeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHH
Confidence 12224678899999988766 89999999999999999999999999999999753211100 01011111110
Q ss_pred HHHhhcCCCcccCCCchhHHHHh---ch--hhhhhhhcccccccC-CcchHHHHHHH----HhhHHHHHhccCCCCcEEE
Q 018984 211 GIANILPKHKLVPQKDLAEAAFR---DL--KNRELTKYNVIVYKD-KPRLRTALELL----KTTEGIERRLEKVSLPLLI 280 (348)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~i~~P~l~ 280 (348)
....... ..+...... .. ............... ........... ....+....++++++|+|+
T Consensus 156 ----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvll 228 (282)
T TIGR03343 156 ----LYAEPSY---ETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLV 228 (282)
T ss_pred ----HhcCCCH---HHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEE
Confidence 0000000 000000000 00 000000000000000 00000000000 0011234567889999999
Q ss_pred EecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 281 LHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 281 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
++|++|.+++++.++.+.+.+ +++++++++++||+++.|+|++ +.+.|.+||.
T Consensus 229 i~G~~D~~v~~~~~~~~~~~~--~~~~~~~i~~agH~~~~e~p~~----~~~~i~~fl~ 281 (282)
T TIGR03343 229 TWGRDDRFVPLDHGLKLLWNM--PDAQLHVFSRCGHWAQWEHADA----FNRLVIDFLR 281 (282)
T ss_pred EEccCCCcCCchhHHHHHHhC--CCCEEEEeCCCCcCCcccCHHH----HHHHHHHHhh
Confidence 999999999999999998888 8999999999999999999998 8999999985
No 21
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=7.5e-32 Score=217.32 Aligned_cols=241 Identities=21% Similarity=0.308 Sum_probs=151.4
Q ss_pred eEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHH
Q 018984 70 IFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNI 149 (348)
Q Consensus 70 l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 149 (348)
++|..+ +++.|+|||+||++++... |..+...|.+. |+|+++|+||||.|..... ++++++++++.+ +
T Consensus 4 ~~y~~~----G~g~~~ivllHG~~~~~~~-w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~--~~~~~~~~~l~~----~ 71 (256)
T PRK10349 4 IWWQTK----GQGNVHLVLLHGWGLNAEV-WRCIDEELSSH-FTLHLVDLPGFGRSRGFGA--LSLADMAEAVLQ----Q 71 (256)
T ss_pred cchhhc----CCCCCeEEEECCCCCChhH-HHHHHHHHhcC-CEEEEecCCCCCCCCCCCC--CCHHHHHHHHHh----c
Confidence 455544 2234569999999988886 88999999655 9999999999999976432 477766666543 2
Q ss_pred HcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhH
Q 018984 150 KEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAE 229 (348)
Q Consensus 150 ~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (348)
..+ +++++||||||.+++.+|.++|++|+++|++++....................+...+.... .....
T Consensus 72 ~~~------~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 141 (256)
T PRK10349 72 APD------KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDF----QRTVE 141 (256)
T ss_pred CCC------CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhch----HHHHH
Confidence 222 89999999999999999999999999999998754322111000000000101100000000 00000
Q ss_pred HHH-----hchh-hhhhhhcc----cccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHH
Q 018984 230 AAF-----RDLK-NRELTKYN----VIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYE 299 (348)
Q Consensus 230 ~~~-----~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 299 (348)
.++ .... ........ .................. ..+....+.++++|+|+++|++|.++|.+..+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 220 (256)
T PRK10349 142 RFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDK 220 (256)
T ss_pred HHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHH-hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHH
Confidence 000 0000 00000000 000000001111111111 123456788999999999999999999998888888
Q ss_pred HhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 300 KASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 300 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
.+ +++++++++++||++++|+|+. +.+.+.+|-.
T Consensus 221 ~i--~~~~~~~i~~~gH~~~~e~p~~----f~~~l~~~~~ 254 (256)
T PRK10349 221 LW--PHSESYIFAKAAHAPFISHPAE----FCHLLVALKQ 254 (256)
T ss_pred hC--CCCeEEEeCCCCCCccccCHHH----HHHHHHHHhc
Confidence 88 8899999999999999999998 8888887754
No 22
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.3e-31 Score=216.63 Aligned_cols=251 Identities=15% Similarity=0.210 Sum_probs=164.1
Q ss_pred eEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHH
Q 018984 70 IFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNI 149 (348)
Q Consensus 70 l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 149 (348)
++|..+++.+ ...|+|||+||++++... |..+++.|. ++|+|+++|+||||.|..+....++++++++++.++++.+
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~~-~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGSY-WAPQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchhH-HHHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 4677776533 236789999999998775 778888885 5699999999999999876555568999999999999988
Q ss_pred HcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCC-Cc--
Q 018984 150 KEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQ-KD-- 226 (348)
Q Consensus 150 ~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 226 (348)
... +++++||||||.+++.++.++|++++++|++++......... .........+.. ......... ..
T Consensus 78 ~~~------~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~ 148 (257)
T TIGR03611 78 NIE------RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR--RCFDVRIALLQH-AGPEAYVHAQALFL 148 (257)
T ss_pred CCC------cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH--HHHHHHHHHHhc-cCcchhhhhhhhhh
Confidence 655 899999999999999999999999999999987654321100 000000011100 000000000 00
Q ss_pred hhHHHHhchhhh--hhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCC
Q 018984 227 LAEAAFRDLKNR--ELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK 304 (348)
Q Consensus 227 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 304 (348)
....+....... .........+............... .+....+.++++|+++++|++|.++|.+.++.+.+.+ +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~ 225 (257)
T TIGR03611 149 YPADWISENAARLAADEAHALAHFPGKANVLRRINALEA-FDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL--P 225 (257)
T ss_pred ccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHc-CCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc--C
Confidence 000000000000 0000000000011111111111111 1233567789999999999999999999999888887 7
Q ss_pred CceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 305 DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 305 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
+++++.++++||+++.++|++ +.+.|.+||+
T Consensus 226 ~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~ 256 (257)
T TIGR03611 226 NAQLKLLPYGGHASNVTDPET----FNRALLDFLK 256 (257)
T ss_pred CceEEEECCCCCCccccCHHH----HHHHHHHHhc
Confidence 889999999999999999988 8899999985
No 23
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-31 Score=221.24 Aligned_cols=264 Identities=17% Similarity=0.172 Sum_probs=162.4
Q ss_pred cCCCceeEEEEeccCCC----CCceeEEEEecCCCcccccc-hhHHHHH-------HhCCceEEeecCCCCccCCCCCCC
Q 018984 64 NSRGVEIFCKSWLPETS----QPKGLVCYCHGYGDTCTFFF-EGTARKL-------ASSGYGVFAMDYPGFGLSAGLHGY 131 (348)
Q Consensus 64 ~~~g~~l~~~~~~p~~~----~~~~~vv~~HG~~~~~~~~~-~~~~~~l-------~~~g~~vi~~D~~G~G~s~~~~~~ 131 (348)
+.+|.+++|..+++... ...|+|||+||++++...|+ ..+.+.| ..++|+|+++|+||||.|+.+...
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 36788999998754210 01578999999998876644 2455444 245799999999999999865431
Q ss_pred ------CCChhHHHHHHHHHH-HHHHcCCCCCCCCeE-EEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChH
Q 018984 132 ------IPSFDRLVDDVIEHY-SNIKEYPEFRTLPSF-LFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPF 203 (348)
Q Consensus 132 ------~~~~~~~~~d~~~~l-~~l~~~~~~~~~~v~-l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~ 203 (348)
.++++++++++.+++ +.+..+ +++ ++||||||++|+.+|.++|++|+++|++++....... ...
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~------~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~--~~~ 197 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVK------HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG--RNW 197 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCC------ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH--HHH
Confidence 358888898887755 666654 675 8999999999999999999999999999875321110 011
Q ss_pred HHHHH-HHHHHhhcCCC--cccCCC-chhHHH--H---h----------chhhh---hhhhcccccccCCcchHHHHHHH
Q 018984 204 LVKQI-LIGIANILPKH--KLVPQK-DLAEAA--F---R----------DLKNR---ELTKYNVIVYKDKPRLRTALELL 261 (348)
Q Consensus 204 ~~~~~-~~~~~~~~~~~--~~~~~~-~~~~~~--~---~----------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 261 (348)
..... ...+....... ...... ...... + . ..... ........... ...........
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 276 (360)
T PRK06489 198 MWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPV-TADANDFLYQW 276 (360)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhh-hcCHHHHHHHH
Confidence 01111 11111110000 000000 000000 0 0 00000 00000000000 00011111111
Q ss_pred H--hhHHHHHhccCCCCcEEEEecCCCCcCCHHHH--HHHHHHhcCCCceEEEcCCC----CcccccCCChhHHHHHHHH
Q 018984 262 K--TTEGIERRLEKVSLPLLILHGENDTVTDPSVS--KALYEKASSKDKKCILYKDA----FHSLLEGEPDDMIIRVFAD 333 (348)
Q Consensus 262 ~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~~~~~ 333 (348)
. ...+....+.+|++|+|+|+|++|.++|++.. +.+.+.+ ++.++++++++ ||.++ ++|++ +.+.
T Consensus 277 ~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~-e~P~~----~~~~ 349 (360)
T PRK06489 277 DSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV--KHGRLVLIPASPETRGHGTT-GSAKF----WKAY 349 (360)
T ss_pred HHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC--cCCeEEEECCCCCCCCcccc-cCHHH----HHHH
Confidence 1 11134567889999999999999999998865 6788887 88999999996 99997 79998 8999
Q ss_pred HHHHHhhhcC
Q 018984 334 IISWLDDHSR 343 (348)
Q Consensus 334 i~~fl~~~~~ 343 (348)
|.+||++.-+
T Consensus 350 i~~FL~~~~~ 359 (360)
T PRK06489 350 LAEFLAQVPK 359 (360)
T ss_pred HHHHHHhccc
Confidence 9999987643
No 24
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.7e-31 Score=218.47 Aligned_cols=260 Identities=19% Similarity=0.266 Sum_probs=170.1
Q ss_pred eEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHH
Q 018984 60 SYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLV 139 (348)
Q Consensus 60 ~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 139 (348)
..+++.+|.+++|...++. ..|+|||+||++++... |..+.+.|++ +|+|+++|+||||.|+.+....+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~g~~---~~~~vv~~hG~~~~~~~-~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPT---AGPLLLLLHGTGASTHS-WRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMA 82 (278)
T ss_pred cceeeECCEEEEEEecCCC---CCCeEEEEcCCCCCHHH-HHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHH
Confidence 3455779999999886433 24789999999988776 7888898865 59999999999999987665446999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCC--hHHHHHHHHH---HHh
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVP--PFLVKQILIG---IAN 214 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~~---~~~ 214 (348)
+|+.++++.+..+ +++|+||||||.+++.++.++|++++++|++++.......... .......... ...
T Consensus 83 ~~l~~~i~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (278)
T TIGR03056 83 EDLSALCAAEGLS------PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPP 156 (278)
T ss_pred HHHHHHHHHcCCC------CceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchH
Confidence 9999999887654 7899999999999999999999999999999876542211100 0000000000 000
Q ss_pred hcCCCcccCCCchhHHHHhchhhhhhhhcccc----cccCCcchHHHHHHHHh--hHHHHHhccCCCCcEEEEecCCCCc
Q 018984 215 ILPKHKLVPQKDLAEAAFRDLKNRELTKYNVI----VYKDKPRLRTALELLKT--TEGIERRLEKVSLPLLILHGENDTV 288 (348)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~ 288 (348)
..... ....... ......... ........ ................. .......++++++|+++++|++|..
T Consensus 157 ~~~~~-~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~ 233 (278)
T TIGR03056 157 MMSRG-AADQQRV-ERLIRDTGS-LLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKA 233 (278)
T ss_pred HHHhh-cccCcch-hHHhhcccc-ccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcc
Confidence 00000 0000000 000000000 00000000 00000000111111111 1112345778999999999999999
Q ss_pred CCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 289 TDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
+|.+..+.+.+.+ ++++++.++++||+++.+.|++ +.+.|.+|++
T Consensus 234 vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~f~~ 278 (278)
T TIGR03056 234 VPPDESKRAATRV--PTATLHVVPGGGHLVHEEQADG----VVGLILQAAE 278 (278)
T ss_pred cCHHHHHHHHHhc--cCCeEEEECCCCCcccccCHHH----HHHHHHHHhC
Confidence 9999998888887 7889999999999999999998 9999999974
No 25
>PLN02578 hydrolase
Probab=100.00 E-value=1.3e-30 Score=218.67 Aligned_cols=258 Identities=21% Similarity=0.260 Sum_probs=166.7
Q ss_pred EEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHH
Q 018984 61 YEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVD 140 (348)
Q Consensus 61 ~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 140 (348)
.+.+.+|.+++|...+ ..++|||+||++++... |..+.+.|++ +|+|+++|+||||.|+.+... ++.+.+++
T Consensus 69 ~~~~~~~~~i~Y~~~g-----~g~~vvliHG~~~~~~~-w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~-~~~~~~a~ 140 (354)
T PLN02578 69 NFWTWRGHKIHYVVQG-----EGLPIVLIHGFGASAFH-WRYNIPELAK-KYKVYALDLLGFGWSDKALIE-YDAMVWRD 140 (354)
T ss_pred eEEEECCEEEEEEEcC-----CCCeEEEECCCCCCHHH-HHHHHHHHhc-CCEEEEECCCCCCCCCCcccc-cCHHHHHH
Confidence 3445678889987652 23569999999998765 7888888865 599999999999999876543 58888999
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCC---------hH----HHHH
Q 018984 141 DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVP---------PF----LVKQ 207 (348)
Q Consensus 141 d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~---------~~----~~~~ 207 (348)
++.++++.+..+ +++++|||+||.+++.+|.++|++++++|++++.......... .. ....
T Consensus 141 ~l~~~i~~~~~~------~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 141 QVADFVKEVVKE------PAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHHHHHHHhccC------CeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 999999988755 8999999999999999999999999999999875432211100 00 0000
Q ss_pred HHHHHHhhcCC---CcccCCCchhHH---HHhchh--hhhhhhcccccccCCcchHHHHHHHHh------hHHHHHhccC
Q 018984 208 ILIGIANILPK---HKLVPQKDLAEA---AFRDLK--NRELTKYNVIVYKDKPRLRTALELLKT------TEGIERRLEK 273 (348)
Q Consensus 208 ~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 273 (348)
........... ............ .+.... ........................... ..+..+.+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 294 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSK 294 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhc
Confidence 00000000000 000000000000 000000 000000000000011111111111111 1123456788
Q ss_pred CCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 274 VSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 274 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
+++|+++|+|++|.++|.+.++.+.+.+ ++.+++++ ++||+++.|+|++ +.+.|.+|++
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l~~i-~~GH~~~~e~p~~----~~~~I~~fl~ 353 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTLVNL-QAGHCPHDEVPEQ----VNKALLEWLS 353 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEe-CCCCCccccCHHH----HHHHHHHHHh
Confidence 9999999999999999999999888888 78899888 5899999999999 9999999985
No 26
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=2.6e-30 Score=216.48 Aligned_cols=265 Identities=14% Similarity=0.067 Sum_probs=158.8
Q ss_pred cCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHH---HHHHhCCceEEeecCCCCccCCCCCC--CCCChhH-
Q 018984 64 NSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTA---RKLASSGYGVFAMDYPGFGLSAGLHG--YIPSFDR- 137 (348)
Q Consensus 64 ~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~---~~l~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~- 137 (348)
+.+|.+|+|..+++.+....|+||++||++++... |..+. +.|...+|+||++|+||||.|+.+.. ..++++.
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~-~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQD-NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCccc-chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 45688999998875422234677777777766554 54332 35655679999999999999976532 1234332
Q ss_pred ----HHHHHHH----HHHHHHcCCCCCCCC-eEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHH
Q 018984 138 ----LVDDVIE----HYSNIKEYPEFRTLP-SFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQI 208 (348)
Q Consensus 138 ----~~~d~~~----~l~~l~~~~~~~~~~-v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 208 (348)
+++|+.+ +++.++.. + ++|+||||||++|+.+|.++|++|+++|++++....... ........
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~------~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~--~~~~~~~~ 172 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIE------RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPH--NFVFLEGL 172 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCC------ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHH--HHHHHHHH
Confidence 4556655 55666655 7 479999999999999999999999999999865432110 00000001
Q ss_pred HHHHHhhcCCC--ccc--CCCch------------hHHHHhchhh--------hhhhhcccccc---cCCcchHHHHHHH
Q 018984 209 LIGIANILPKH--KLV--PQKDL------------AEAAFRDLKN--------RELTKYNVIVY---KDKPRLRTALELL 261 (348)
Q Consensus 209 ~~~~~~~~~~~--~~~--~~~~~------------~~~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~~~~ 261 (348)
...+....... ... +.... ...++..... ........... .............
T Consensus 173 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 252 (339)
T PRK07581 173 KAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTW 252 (339)
T ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHh
Confidence 10010000000 000 00000 0000000000 00000000000 0111111111111
Q ss_pred H------h---hHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCC-CCcccccCCChhHHHHHH
Q 018984 262 K------T---TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD-AFHSLLEGEPDDMIIRVF 331 (348)
Q Consensus 262 ~------~---~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~ 331 (348)
. . ..+....+.++++|+|+|+|++|..+|++..+.+.+.+ ++++++++++ +||..+.++++. +.
T Consensus 253 ~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~~----~~ 326 (339)
T PRK07581 253 QRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNPA----DI 326 (339)
T ss_pred hhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcHH----HH
Confidence 1 0 01345678889999999999999999999999888888 7899999998 999999999998 78
Q ss_pred HHHHHHHhhhcC
Q 018984 332 ADIISWLDDHSR 343 (348)
Q Consensus 332 ~~i~~fl~~~~~ 343 (348)
..|.+||++.+.
T Consensus 327 ~~~~~~~~~~~~ 338 (339)
T PRK07581 327 AFIDAALKELLA 338 (339)
T ss_pred HHHHHHHHHHHh
Confidence 888888877653
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=1.1e-29 Score=208.94 Aligned_cols=260 Identities=18% Similarity=0.196 Sum_probs=161.5
Q ss_pred EecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCC--CCChhHHH
Q 018984 62 EVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGY--IPSFDRLV 139 (348)
Q Consensus 62 ~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~--~~~~~~~~ 139 (348)
+++.+|.++.|....+.+ .+++|||+||++++...+|..+...+.+.||+|+++|+||+|.|..+... .+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~--~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEG--EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred eecCCCCeEEEEeccCCC--CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 355677778887764332 25789999998766665677777777666999999999999999865432 25889999
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHH-HHH----HHHHHHh
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFL-VKQ----ILIGIAN 214 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-~~~----~~~~~~~ 214 (348)
+++.++++.+..+ +++++||||||.+++.++.++|++++++|++++............. ... ....+..
T Consensus 84 ~~~~~~~~~~~~~------~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (288)
T TIGR01250 84 DELEEVREKLGLD------KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKR 157 (288)
T ss_pred HHHHHHHHHcCCC------cEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHH
Confidence 9999999887655 7999999999999999999999999999999875432110000000 000 0000000
Q ss_pred hcCCCcccCCCchhHHHHhchhhhhhhh-----cccccccCCcchHHHHHH-----------HHhhHHHHHhccCCCCcE
Q 018984 215 ILPKHKLVPQKDLAEAAFRDLKNRELTK-----YNVIVYKDKPRLRTALEL-----------LKTTEGIERRLEKVSLPL 278 (348)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~i~~P~ 278 (348)
..... ......... ............ .......... ....... .....+....+.++++|+
T Consensus 158 ~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 234 (288)
T TIGR01250 158 CEASG-DYDNPEYQE-AVEVFYHHLLCRTRKWPEALKHLKSGM-NTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPT 234 (288)
T ss_pred HHhcc-CcchHHHHH-HHHHHHHHhhcccccchHHHHHHhhcc-CHHHHhcccCCccccccccccccCHHHHhhccCCCE
Confidence 00000 000000000 000000000000 0000000000 0000000 000112335667899999
Q ss_pred EEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 279 LILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 279 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
++++|++|.+ +++..+.+.+.+ +++++++++++||+++.++|++ +.+.|.+||+
T Consensus 235 lii~G~~D~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~ 288 (288)
T TIGR01250 235 LLTVGEFDTM-TPEAAREMQELI--AGSRLVVFPDGSHMTMIEDPEV----YFKLLSDFIR 288 (288)
T ss_pred EEEecCCCcc-CHHHHHHHHHhc--cCCeEEEeCCCCCCcccCCHHH----HHHHHHHHhC
Confidence 9999999985 567777777777 7789999999999999999998 8899988874
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=1.5e-30 Score=209.64 Aligned_cols=241 Identities=16% Similarity=0.220 Sum_probs=158.1
Q ss_pred eEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHH
Q 018984 70 IFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNI 149 (348)
Q Consensus 70 l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l 149 (348)
++|..+++. +.+|+||++||++.+... |..+++.|. .||+|+++|+||||.|+.+.. .++++++++++.++++.+
T Consensus 2 ~~~~~~g~~--~~~~~li~~hg~~~~~~~-~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 2 LHYRLDGAA--DGAPVLVFINSLGTDLRM-WDPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDHL 76 (251)
T ss_pred ceEEeecCC--CCCCeEEEEcCcccchhh-HHHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh
Confidence 566655432 246889999999988775 788888884 689999999999999976543 358999999999999987
Q ss_pred HcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHH--------HH-HHHhhcCCCc
Q 018984 150 KEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQI--------LI-GIANILPKHK 220 (348)
Q Consensus 150 ~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~ 220 (348)
... +++++|||+||++++.+|.++|++++++|++++................. .. .+...+....
T Consensus 77 ~~~------~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (251)
T TIGR02427 77 GIE------RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGF 150 (251)
T ss_pred CCC------ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHccccc
Confidence 654 89999999999999999999999999999998754322110000000000 00 0000000000
Q ss_pred ccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHH
Q 018984 221 LVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEK 300 (348)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 300 (348)
............ . .. .......+......+. ..+....+.++++|+++++|++|.++|.+....+.+.
T Consensus 151 ~~~~~~~~~~~~-~----~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~ 218 (251)
T TIGR02427 151 REAHPARLDLYR-N----ML------VRQPPDGYAGCCAAIR-DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADL 218 (251)
T ss_pred ccCChHHHHHHH-H----HH------HhcCHHHHHHHHHHHh-cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHh
Confidence 000000000000 0 00 0000000000001111 1123356678999999999999999999988888888
Q ss_pred hcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 301 ASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 301 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
+ ++.++++++++||.++.++|++ +.+.+.+|++
T Consensus 219 ~--~~~~~~~~~~~gH~~~~~~p~~----~~~~i~~fl~ 251 (251)
T TIGR02427 219 V--PGARFAEIRGAGHIPCVEQPEA----FNAALRDFLR 251 (251)
T ss_pred C--CCceEEEECCCCCcccccChHH----HHHHHHHHhC
Confidence 7 6789999999999999999988 8888888873
No 29
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.7e-30 Score=217.26 Aligned_cols=259 Identities=14% Similarity=0.120 Sum_probs=158.4
Q ss_pred ecCCCceeEEEEeccCCCCCceeEEEEecCCCcccc-----------cchhHHH---HHHhCCceEEeecCCCCccCCCC
Q 018984 63 VNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF-----------FFEGTAR---KLASSGYGVFAMDYPGFGLSAGL 128 (348)
Q Consensus 63 ~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~-----------~~~~~~~---~l~~~g~~vi~~D~~G~G~s~~~ 128 (348)
...+|.+++|..+++. .+++||+||++++... ||..+.. .|...+|+|+++|+||||.|...
T Consensus 41 ~~~~~~~l~y~~~G~~----~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~ 116 (343)
T PRK08775 41 AGLEDLRLRYELIGPA----GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV 116 (343)
T ss_pred CCCCCceEEEEEeccC----CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC
Confidence 3447889999987532 2236777666655542 5787775 56445699999999999988432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHcCCCCCCCC-eEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHH
Q 018984 129 HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLP-SFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQ 207 (348)
Q Consensus 129 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 207 (348)
.+++.++++|+.++++.++.+ + ++|+||||||++++.+|.++|++|+++|++++....... ......
T Consensus 117 ---~~~~~~~a~dl~~ll~~l~l~------~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~---~~~~~~ 184 (343)
T PRK08775 117 ---PIDTADQADAIALLLDALGIA------RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPY---AAAWRA 184 (343)
T ss_pred ---CCCHHHHHHHHHHHHHHcCCC------cceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHH---HHHHHH
Confidence 247889999999999998764 4 579999999999999999999999999999986432110 000011
Q ss_pred HHHHHHhhcCCCcccCCC-chhHHH-Hh-chhhhhh-hhccccc---------------------ccCCcchHHHHHHHH
Q 018984 208 ILIGIANILPKHKLVPQK-DLAEAA-FR-DLKNREL-TKYNVIV---------------------YKDKPRLRTALELLK 262 (348)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~~-~~~~~~~---------------------~~~~~~~~~~~~~~~ 262 (348)
.................. ...... .. ....... ..+.... +..............
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T PRK08775 185 LQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSE 264 (343)
T ss_pred HHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHH
Confidence 101110000000000000 000000 00 0000000 0000000 000000000011111
Q ss_pred hhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCC-CCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 263 TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD-AFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 263 ~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
........+.++++|+|+++|++|.++|.+..+.+.+.+. ++++++++++ +||.+++|+|++ +.+.|.+||++.
T Consensus 265 ~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~----~~~~l~~FL~~~ 339 (343)
T PRK08775 265 SIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDR----IDAILTTALRST 339 (343)
T ss_pred HHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHH----HHHHHHHHHHhc
Confidence 0000012367899999999999999999988888888763 4789999985 999999999998 999999999765
Q ss_pred c
Q 018984 342 S 342 (348)
Q Consensus 342 ~ 342 (348)
-
T Consensus 340 ~ 340 (343)
T PRK08775 340 G 340 (343)
T ss_pred c
Confidence 3
No 30
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=6.3e-30 Score=214.57 Aligned_cols=262 Identities=15% Similarity=0.147 Sum_probs=163.2
Q ss_pred cCCCceeEEEEeccCCCCCceeEEEEecCCCcccc----------cchhHH---HHHHhCCceEEeecCCC--CccCCCC
Q 018984 64 NSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF----------FFEGTA---RKLASSGYGVFAMDYPG--FGLSAGL 128 (348)
Q Consensus 64 ~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~----------~~~~~~---~~l~~~g~~vi~~D~~G--~G~s~~~ 128 (348)
..+|.+|+|..+++.+....++|||+||++++... ||..++ ..|..++|+|+++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 55788999999986433345789999999987532 466664 25556789999999999 5555321
Q ss_pred ----C-------CCCCChhHHHHHHHHHHHHHHcCCCCCCCC-eEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccccc
Q 018984 129 ----H-------GYIPSFDRLVDDVIEHYSNIKEYPEFRTLP-SFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 196 (348)
Q Consensus 129 ----~-------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 196 (348)
. ...++++++++++.++++.++.. + ++++||||||++++.+|.++|++|+++|++++.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE------QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHS 165 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC------CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCC
Confidence 1 11358899999999999998765 7 9999999999999999999999999999999865432
Q ss_pred ccCCChHHHHHHHHHHHhhc--CCCcccC----CCchh-HHHHh---chhhhhhhh-cccc-------------------
Q 018984 197 DDMVPPFLVKQILIGIANIL--PKHKLVP----QKDLA-EAAFR---DLKNRELTK-YNVI------------------- 246 (348)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~-~~~~~---~~~~~~~~~-~~~~------------------- 246 (348)
... ..........+.... ....... ..... ..... ......... +...
T Consensus 166 ~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 243 (351)
T TIGR01392 166 AWC--IAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVES 243 (351)
T ss_pred HHH--HHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHH
Confidence 110 000010011111000 0000000 00000 00000 000000000 0000
Q ss_pred ---------ccc-CCcchHHHHHHHHhh------HHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEE-
Q 018984 247 ---------VYK-DKPRLRTALELLKTT------EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCI- 309 (348)
Q Consensus 247 ---------~~~-~~~~~~~~~~~~~~~------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~- 309 (348)
... ....+......+... .+..+.+++|++|+|+|+|++|.++|++..+.+.+.+ ++.+++
T Consensus 244 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i--~~~~~~v 321 (351)
T TIGR01392 244 YLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL--PAAGLRV 321 (351)
T ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH--hhcCCce
Confidence 000 000000111111110 1234678899999999999999999999999999998 555544
Q ss_pred ----EcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 310 ----LYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 310 ----~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
+++++||.+++++|++ +.+.|.+||+
T Consensus 322 ~~~~i~~~~GH~~~le~p~~----~~~~l~~FL~ 351 (351)
T TIGR01392 322 TYVEIESPYGHDAFLVETDQ----VEELIRGFLR 351 (351)
T ss_pred EEEEeCCCCCcchhhcCHHH----HHHHHHHHhC
Confidence 5678999999999998 8999999974
No 31
>PLN02511 hydrolase
Probab=99.97 E-value=3.1e-29 Score=211.58 Aligned_cols=281 Identities=11% Similarity=0.098 Sum_probs=169.8
Q ss_pred CCccceeeEEecCCCceeEEEEeccC---CCCCceeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecCCCCccCCCC
Q 018984 53 DGLKTEESYEVNSRGVEIFCKSWLPE---TSQPKGLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDYPGFGLSAGL 128 (348)
Q Consensus 53 ~~~~~~~~~~~~~~g~~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~ 128 (348)
..+.+++..+.+.||..+.+..+.+. ....+|+||++||++++... |+..++..+.++||+|+++|+||||.|...
T Consensus 67 ~~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~ 146 (388)
T PLN02511 67 PAVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT 146 (388)
T ss_pred CCCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 34557778889999999887654321 12347899999999776543 456677777789999999999999999754
Q ss_pred CCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCC--cceEEEeCcccccccc---CCCh-
Q 018984 129 HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNA--WSGAILVAPMCKIADD---MVPP- 202 (348)
Q Consensus 129 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~---~~~~- 202 (348)
.... .....++|+.++++++..+ ++..+++++||||||.+++.++.++|++ |+++++++++.+.... ....
T Consensus 147 ~~~~-~~~~~~~Dl~~~i~~l~~~--~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~ 223 (388)
T PLN02511 147 TPQF-YSASFTGDLRQVVDHVAGR--YPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGF 223 (388)
T ss_pred CcCE-EcCCchHHHHHHHHHHHHH--CCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccH
Confidence 3321 2356688999999999875 3455899999999999999999999987 8888888766543110 0000
Q ss_pred --HHHHHHHHHHHhhcCCCc-ccC--CCchh-HHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCC
Q 018984 203 --FLVKQILIGIANILPKHK-LVP--QKDLA-EAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL 276 (348)
Q Consensus 203 --~~~~~~~~~~~~~~~~~~-~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 276 (348)
.....+...+........ ... ...+. ..................... .+.....++. ..+....+.+|++
T Consensus 224 ~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~---gf~~~~~yy~-~~s~~~~L~~I~v 299 (388)
T PLN02511 224 NNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSF---GFKSVDAYYS-NSSSSDSIKHVRV 299 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcC---CCCCHHHHHH-HcCchhhhccCCC
Confidence 000001101111000000 000 00000 000000000000000000000 0001111111 1123357789999
Q ss_pred cEEEEecCCCCcCCHHHH-HHHHHHhcCCCceEEEcCCCCcccccCCChhH--HHHHHHHHHHHHhhhc
Q 018984 277 PLLILHGENDTVTDPSVS-KALYEKASSKDKKCILYKDAFHSLLEGEPDDM--IIRVFADIISWLDDHS 342 (348)
Q Consensus 277 P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~--~~~~~~~i~~fl~~~~ 342 (348)
|+|+|+|++|+++|.+.. ....+.. +++++++++++||..++|+|+.. ...+.+.+.+||+...
T Consensus 300 PtLiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 300 PLLCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred CeEEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 999999999999997654 3344444 88999999999999999998652 1224677778876544
No 32
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=6.7e-30 Score=204.47 Aligned_cols=229 Identities=17% Similarity=0.209 Sum_probs=144.6
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEE
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFL 162 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 162 (348)
+|+|||+||++++... |..+.+.| + +|+|+++|+||||.|+.+.. .+++++++|+.++++.+... ++++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~~~------~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYNIL------PYWL 70 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcCCC------CeEE
Confidence 4679999999999876 88999988 3 69999999999999987654 38999999999999987655 8999
Q ss_pred EEeChhHHHHHHHHHhCCCC-cceEEEeCccccccccCCChHHHHHHH--HHHHhhcCCCcccCCCchhHHHH-----hc
Q 018984 163 FGQSLGGAVALKVHLKQPNA-WSGAILVAPMCKIADDMVPPFLVKQIL--IGIANILPKHKLVPQKDLAEAAF-----RD 234 (348)
Q Consensus 163 ~GhS~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----~~ 234 (348)
+||||||.+++.+|.++|+. |++++++++....... ........ ......+... .........+ ..
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 144 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNA---EERQARWQNDRQWAQRFRQE---PLEQVLADWYQQPVFAS 144 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCH---HHHHHHHhhhHHHHHHhccC---cHHHHHHHHHhcchhhc
Confidence 99999999999999999764 9999999876432211 00000000 0000000000 0000000000 00
Q ss_pred hhhhhhhhccccccc-CCcchHHHHHHH--HhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEc
Q 018984 235 LKNRELTKYNVIVYK-DKPRLRTALELL--KTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILY 311 (348)
Q Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (348)
............... ............ ....+..+.+.++++|+++++|++|..+. .+.+. .+++++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~~i 216 (242)
T PRK11126 145 LNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLHVI 216 (242)
T ss_pred cCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEEEe
Confidence 000000000000000 000000111000 01123445778999999999999998552 22333 37899999
Q ss_pred CCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 312 KDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 312 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
+++||+++.|+|++ +.+.|.+|+++
T Consensus 217 ~~~gH~~~~e~p~~----~~~~i~~fl~~ 241 (242)
T PRK11126 217 PNAGHNAHRENPAA----FAASLAQILRL 241 (242)
T ss_pred CCCCCchhhhChHH----HHHHHHHHHhh
Confidence 99999999999998 88999999864
No 33
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=3.3e-29 Score=182.49 Aligned_cols=229 Identities=23% Similarity=0.310 Sum_probs=166.3
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEE
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFL 162 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 162 (348)
+.+||++||+.|+.+. .+.+.++|.++||.|.+|.+||||......-. .+.++|.+++.+.+++|... .-..|.+
T Consensus 15 ~~AVLllHGFTGt~~D-vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-t~~~DW~~~v~d~Y~~L~~~---gy~eI~v 89 (243)
T COG1647 15 NRAVLLLHGFTGTPRD-VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-TTPRDWWEDVEDGYRDLKEA---GYDEIAV 89 (243)
T ss_pred CEEEEEEeccCCCcHH-HHHHHHHHHHCCceEecCCCCCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHHc---CCCeEEE
Confidence 3689999999999887 79999999999999999999999987633222 48999999999999999854 1227999
Q ss_pred EEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhh
Q 018984 163 FGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTK 242 (348)
Q Consensus 163 ~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (348)
+|.||||.+++.+|.++| ++++|.++++....... ......+... .............+...+
T Consensus 90 ~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~---~iie~~l~y~-~~~kk~e~k~~e~~~~e~----------- 152 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR---IIIEGLLEYF-RNAKKYEGKDQEQIDKEM----------- 152 (243)
T ss_pred EeecchhHHHHHHHhhCC--ccceeeecCCcccccch---hhhHHHHHHH-HHhhhccCCCHHHHHHHH-----------
Confidence 999999999999999999 89999999877543321 1112222211 111110111100010000
Q ss_pred cccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCC
Q 018984 243 YNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 322 (348)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 322 (348)
..+. .........+.....+....+..|..|++++.|.+|+.+|.+.+..+++.+.....++.+++++||.+..+.
T Consensus 153 ---~~~~-~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~ 228 (243)
T COG1647 153 ---KSYK-DTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDK 228 (243)
T ss_pred ---HHhh-cchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecch
Confidence 0000 111222333334445666788899999999999999999999999999999878899999999999998865
Q ss_pred ChhHHHHHHHHHHHHHhh
Q 018984 323 PDDMIIRVFADIISWLDD 340 (348)
Q Consensus 323 ~~~~~~~~~~~i~~fl~~ 340 (348)
..+ ++.+.+..||+.
T Consensus 229 Erd---~v~e~V~~FL~~ 243 (243)
T COG1647 229 ERD---QVEEDVITFLEK 243 (243)
T ss_pred hHH---HHHHHHHHHhhC
Confidence 544 599999999973
No 34
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=2.2e-29 Score=212.71 Aligned_cols=268 Identities=13% Similarity=0.116 Sum_probs=165.5
Q ss_pred cCCCceeEEEEeccCCCCCceeEEEEecCCCcccc------------cchhHHH---HHHhCCceEEeecCCCC-ccCCC
Q 018984 64 NSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF------------FFEGTAR---KLASSGYGVFAMDYPGF-GLSAG 127 (348)
Q Consensus 64 ~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~------------~~~~~~~---~l~~~g~~vi~~D~~G~-G~s~~ 127 (348)
+.+|.+++|..++..+....|+|||+||++++... ||..++. .|...+|+|+++|++|+ |.|..
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 45678899999875433336889999999998764 3555542 34356799999999983 54433
Q ss_pred CCC-------------CCCChhHHHHHHHHHHHHHHcCCCCCCCC-eEEEEeChhHHHHHHHHHhCCCCcceEEEeCccc
Q 018984 128 LHG-------------YIPSFDRLVDDVIEHYSNIKEYPEFRTLP-SFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 193 (348)
Q Consensus 128 ~~~-------------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~-v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 193 (348)
+.. ..++++++++++.++++.+... + ++++||||||.+++.+|.++|++|+++|++++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~------~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT------RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC------CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 210 1368999999999999998776 7 5899999999999999999999999999999765
Q ss_pred cccccCCChHHHHHHHHHHHhh--cCCCcccC--CCc-----hhHH----HHhch------hhhhhhhcc----------
Q 018984 194 KIADDMVPPFLVKQILIGIANI--LPKHKLVP--QKD-----LAEA----AFRDL------KNRELTKYN---------- 244 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~-----~~~~----~~~~~------~~~~~~~~~---------- 244 (348)
...... ..........+... ........ ... .... .+... .........
T Consensus 183 ~~~~~~--~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~ 260 (379)
T PRK00175 183 RLSAQN--IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQ 260 (379)
T ss_pred ccCHHH--HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccch
Confidence 432110 00000011111100 00000000 000 0000 00000 000000000
Q ss_pred -----------cccccCCcchHHHHHHHHhh-------HHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCC--
Q 018984 245 -----------VIVYKDKPRLRTALELLKTT-------EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK-- 304 (348)
Q Consensus 245 -----------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-- 304 (348)
.........+......+... .++...+.+|++|+|+|+|++|.++|++..+.+.+.+++.
T Consensus 261 ~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~ 340 (379)
T PRK00175 261 VESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGA 340 (379)
T ss_pred HHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCC
Confidence 00000000011111111111 1245678899999999999999999999999999998421
Q ss_pred CceEEEcC-CCCcccccCCChhHHHHHHHHHHHHHhhhcC
Q 018984 305 DKKCILYK-DAFHSLLEGEPDDMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 305 ~~~~~~~~-~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 343 (348)
++++++++ ++||.+++++|++ +.+.|.+||++...
T Consensus 341 ~~~l~~i~~~~GH~~~le~p~~----~~~~L~~FL~~~~~ 376 (379)
T PRK00175 341 DVSYAEIDSPYGHDAFLLDDPR----YGRLVRAFLERAAR 376 (379)
T ss_pred CeEEEEeCCCCCchhHhcCHHH----HHHHHHHHHHhhhh
Confidence 23777775 9999999999998 99999999987643
No 35
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=1.2e-29 Score=203.54 Aligned_cols=232 Identities=20% Similarity=0.303 Sum_probs=147.1
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEE
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFL 162 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 162 (348)
+|+|||+||++++... |..+.+.|. .+|+|+++|+||+|.|..... .+++++++++.+.+. .++++
T Consensus 4 ~~~iv~~HG~~~~~~~-~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~----------~~~~l 69 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV-FRCLDEELS-AHFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQAP----------DPAIW 69 (245)
T ss_pred CceEEEEcCCCCchhh-HHHHHHhhc-cCeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHhCC----------CCeEE
Confidence 4789999999998876 788999986 469999999999999876432 367777766654431 28999
Q ss_pred EEeChhHHHHHHHHHhCCCCcceEEEeCcccccccc--CC---ChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhh
Q 018984 163 FGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADD--MV---PPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKN 237 (348)
Q Consensus 163 ~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (348)
+||||||.+++.++.++|++++++|++++....... +. .......+...+.... ..................
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 146 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDY---QRTIERFLALQTLGTPTA 146 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhH---HHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999876533211 11 0111111110000000 000000000000000000
Q ss_pred hhh-hh-cccccccCCc---chHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcC
Q 018984 238 REL-TK-YNVIVYKDKP---RLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYK 312 (348)
Q Consensus 238 ~~~-~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (348)
... .. .......... .+...+..+. ..+....+.++++|+++++|++|.++|.+..+.+.+.+ +++++++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~ 223 (245)
T TIGR01738 147 RQDARALKQTLLARPTPNVQVLQAGLEILA-TVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PHSELYIFA 223 (245)
T ss_pred chHHHHHHHHhhccCCCCHHHHHHHHHHhh-cccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CCCeEEEeC
Confidence 000 00 0000000011 1111111111 12334567899999999999999999999988888887 789999999
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHH
Q 018984 313 DAFHSLLEGEPDDMIIRVFADIISWL 338 (348)
Q Consensus 313 ~~gH~~~~~~~~~~~~~~~~~i~~fl 338 (348)
++||++++++|++ +.+.|.+|+
T Consensus 224 ~~gH~~~~e~p~~----~~~~i~~fi 245 (245)
T TIGR01738 224 KAAHAPFLSHAEA----FCALLVAFK 245 (245)
T ss_pred CCCCCccccCHHH----HHHHHHhhC
Confidence 9999999999998 888888885
No 36
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=6.5e-29 Score=194.16 Aligned_cols=270 Identities=23% Similarity=0.299 Sum_probs=161.9
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCC---C
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYI---P 133 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~---~ 133 (348)
....++...++..+......+.+ ..++++|++||+|++...|++ -.+.|++ .++|+++|++|+|.|+.+.-.. .
T Consensus 65 ~~~~~v~i~~~~~iw~~~~~~~~-~~~~plVliHGyGAg~g~f~~-Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~ 141 (365)
T KOG4409|consen 65 YSKKYVRIPNGIEIWTITVSNES-ANKTPLVLIHGYGAGLGLFFR-NFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTT 141 (365)
T ss_pred cceeeeecCCCceeEEEeecccc-cCCCcEEEEeccchhHHHHHH-hhhhhhh-cCceEEecccCCCCCCCCCCCCCccc
Confidence 44445555566666666554443 346789999999988876444 4477866 6999999999999999874321 1
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCC-------ChHHHH
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMV-------PPFLVK 206 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-------~~~~~~ 206 (348)
....+++-+.+.-...+.. +.+|+|||+||+++..+|.+||++|+.+||++|+........ ++....
T Consensus 142 ~e~~fvesiE~WR~~~~L~------KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~ 215 (365)
T KOG4409|consen 142 AEKEFVESIEQWRKKMGLE------KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYK 215 (365)
T ss_pred chHHHHHHHHHHHHHcCCc------ceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHh
Confidence 2233444444444444433 899999999999999999999999999999999887553311 111111
Q ss_pred HHHHHHHhhcCCCcccCCCchh--------HHHHhchh---hhh-hhhcccccccCCcchHHHHHHHHh-----hHHHHH
Q 018984 207 QILIGIANILPKHKLVPQKDLA--------EAAFRDLK---NRE-LTKYNVIVYKDKPRLRTALELLKT-----TEGIER 269 (348)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 269 (348)
..........+.........+. ...+.... ..+ +..+........+.-...+..+.. ...+.+
T Consensus 216 ~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~ 295 (365)
T KOG4409|consen 216 ALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQ 295 (365)
T ss_pred hhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHH
Confidence 1111111000000000001111 11111110 111 122222222233333333222211 223445
Q ss_pred hccCCC--CcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 270 RLEKVS--LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 270 ~~~~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
.+..++ ||+++|+|++|.+ +......+.+.+....++.+++|++||.++.++|+. +++.+.+++++
T Consensus 296 r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~----Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 296 RLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEF----FNQIVLEECDK 363 (365)
T ss_pred HHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHH----HHHHHHHHHhc
Confidence 555555 9999999999865 455666666655446699999999999999999999 77777777764
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=6e-30 Score=202.90 Aligned_cols=216 Identities=25% Similarity=0.443 Sum_probs=150.0
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCC-CCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEE
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHG-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFG 164 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~G 164 (348)
|||+||++++... |..+++.| ++||+|+++|+||+|.|+.+.. ...+++++++|+.++++.+... +++++|
T Consensus 1 vv~~hG~~~~~~~-~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK------KVILVG 72 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS------SEEEEE
T ss_pred eEEECCCCCCHHH-HHHHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc------cccccc
Confidence 7999999999876 88999999 5799999999999999987653 2358899999999999998775 899999
Q ss_pred eChhHHHHHHHHHhCCCCcceEEEeCccccccccCC---ChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhch-hhhhh
Q 018984 165 QSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMV---PPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL-KNREL 240 (348)
Q Consensus 165 hS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 240 (348)
||+||.+++.++.++|++|+++|+++|......... ................ ..+....+... .....
T Consensus 73 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 144 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSL--------RRLASRFFYRWFDGDEP 144 (228)
T ss_dssp ETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHTHHHH
T ss_pred cccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccc--------ccccccccccccccccc
Confidence 999999999999999999999999999875432110 0011111111100000 00000000000 00000
Q ss_pred hhcccccccCCcchHHHHHHHH---hhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcc
Q 018984 241 TKYNVIVYKDKPRLRTALELLK---TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHS 317 (348)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 317 (348)
...... ........+. ...+....++++++|+++++|++|.+++.+..+.+.+.+ +++++++++++||+
T Consensus 145 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~ 216 (228)
T PF12697_consen 145 EDLIRS------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVVIPGAGHF 216 (228)
T ss_dssp HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEEETTSSST
T ss_pred cccccc------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCc
Confidence 000000 1111112221 233445677889999999999999999988898888887 78999999999999
Q ss_pred cccCCChh
Q 018984 318 LLEGEPDD 325 (348)
Q Consensus 318 ~~~~~~~~ 325 (348)
++.++|++
T Consensus 217 ~~~~~p~~ 224 (228)
T PF12697_consen 217 LFLEQPDE 224 (228)
T ss_dssp HHHHSHHH
T ss_pred cHHHCHHH
Confidence 99999998
No 38
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=5.4e-29 Score=200.88 Aligned_cols=251 Identities=16% Similarity=0.188 Sum_probs=155.1
Q ss_pred CCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHH
Q 018984 65 SRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIE 144 (348)
Q Consensus 65 ~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~ 144 (348)
.+|.++.|.. | ++.+|+|||+||++.+... |..+...|.++||+|+++|+||||.|........+++++++++.+
T Consensus 4 ~~~~~~~~~~--~--~~~~p~vvliHG~~~~~~~-w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 4 ENGEEVTDMK--P--NRQPPHFVLIHGISGGSWC-WYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLID 78 (273)
T ss_pred cccccccccc--c--cCCCCeEEEECCCCCCcCc-HHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHH
Confidence 3566777754 2 2336789999999988776 899999998889999999999999886443333589999999999
Q ss_pred HHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCC----Cc
Q 018984 145 HYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK----HK 220 (348)
Q Consensus 145 ~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 220 (348)
+++.+.. ..+++|+||||||.+++.++.++|++|+++|++++...... .............+...... ..
T Consensus 79 ~i~~l~~-----~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T PLN02211 79 FLSSLPE-----NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLG-FQTDEDMKDGVPDLSEFGDVYELGFG 152 (273)
T ss_pred HHHhcCC-----CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCC-CCHHHHHhccccchhhhccceeeeec
Confidence 9987642 12899999999999999999999999999999987532111 10000000000000000000 00
Q ss_pred -----ccCC----CchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCC-CCcEEEEecCCCCcCC
Q 018984 221 -----LVPQ----KDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKV-SLPLLILHGENDTVTD 290 (348)
Q Consensus 221 -----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~ 290 (348)
.... ..+....+.............. ........ .+.. .+.......+ ++|+++|.|++|..+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~-~~~~~~~~~~~~vP~l~I~g~~D~~ip 226 (273)
T PLN02211 153 LGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAM-LLRPGPIL----ALRS-ARFEEETGDIDKVPRVYIKTLHDHVVK 226 (273)
T ss_pred cCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHH-hcCCcCcc----cccc-ccccccccccCccceEEEEeCCCCCCC
Confidence 0000 0000111100000000000000 00000000 0000 0111122344 7899999999999999
Q ss_pred HHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 291 PSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
++..+.+.+.+ ++.+++.++ +||.+++++|++ +.+.|.+...
T Consensus 227 ~~~~~~m~~~~--~~~~~~~l~-~gH~p~ls~P~~----~~~~i~~~a~ 268 (273)
T PLN02211 227 PEQQEAMIKRW--PPSQVYELE-SDHSPFFSTPFL----LFGLLIKAAA 268 (273)
T ss_pred HHHHHHHHHhC--CccEEEEEC-CCCCccccCHHH----HHHHHHHHHH
Confidence 99999999988 667888997 899999999999 6666665543
No 39
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=2.1e-29 Score=205.45 Aligned_cols=249 Identities=24% Similarity=0.334 Sum_probs=159.4
Q ss_pred CCceeEEEEecCCCcccccchhHHHHHHhC-CceEEeecCCCCc-cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCC
Q 018984 81 QPKGLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDYPGFG-LSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTL 158 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G-~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 158 (348)
..+++||++|||+++... |+.....|.+. |+.|+++|++|+| .|..+....++..++++.+..+.......
T Consensus 56 ~~~~pvlllHGF~~~~~~-w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~------ 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFS-WRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE------ 128 (326)
T ss_pred CCCCcEEEeccccCCccc-HhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc------
Confidence 357899999999998776 88888888765 5999999999999 45455555578888888888888777665
Q ss_pred CeEEEEeChhHHHHHHHHHhCCCCcceEE---EeCccccccccCCCh--HHHHHHHHHHHhhcCCCcccCCCchhHHHHh
Q 018984 159 PSFLFGQSLGGAVALKVHLKQPNAWSGAI---LVAPMCKIADDMVPP--FLVKQILIGIANILPKHKLVPQKDLAEAAFR 233 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p~~v~~~v---l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (348)
+++++|||+||.+|+.+|+.+|+.|+++| ++++.....+..... ..............+.........+......
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 208 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLR 208 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhc
Confidence 89999999999999999999999999999 555544432221100 1111111111111111111111111111110
Q ss_pred chhh-----hhhhhccccc--------ccCCcchHHHHHHHHhhHHHHHhccCCC-CcEEEEecCCCCcCCHHHHHHHHH
Q 018984 234 DLKN-----RELTKYNVIV--------YKDKPRLRTALELLKTTEGIERRLEKVS-LPLLILHGENDTVTDPSVSKALYE 299 (348)
Q Consensus 234 ~~~~-----~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~ 299 (348)
.... .......... +.+....................+.++. ||+|+++|++|.++|.+.+..+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~ 288 (326)
T KOG1454|consen 209 CLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKK 288 (326)
T ss_pred ceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHh
Confidence 0000 0000000000 0000000000000000012233556666 999999999999999999999998
Q ss_pred HhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 300 KASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 300 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
.+ +++++++++++||.++.|+|++ ++..|..|+....
T Consensus 289 ~~--pn~~~~~I~~~gH~~h~e~Pe~----~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 289 KL--PNAELVEIPGAGHLPHLERPEE----VAALLRSFIARLR 325 (326)
T ss_pred hC--CCceEEEeCCCCcccccCCHHH----HHHHHHHHHHHhc
Confidence 88 9999999999999999999999 9999999998653
No 40
>PRK13604 luxD acyl transferase; Provisional
Probab=99.97 E-value=6.9e-28 Score=190.60 Aligned_cols=230 Identities=17% Similarity=0.154 Sum_probs=158.2
Q ss_pred ceeeEEecCCCceeEEEEeccCC--CCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCC-ccCCCCCCCCC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPET--SQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGF-GLSAGLHGYIP 133 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~-G~s~~~~~~~~ 133 (348)
...+.+...+|.+|..+...|.+ ..+.++||++||+++.... +..+++.|+++||.|+.+|+||+ |.|++.... .
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~-~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~ 86 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDH-FAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-F 86 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHH-HHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-C
Confidence 45677888899999999998863 3457899999999998654 88999999999999999999988 999775433 2
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHH
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIA 213 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (348)
++.....|+..++++++.. ...++.|+||||||.+++..|... .++++|+.+|....... ... .+.
T Consensus 87 t~s~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~------l~~---~~~ 152 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDT------LER---ALG 152 (307)
T ss_pred cccccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHH------HHH---hhh
Confidence 4445589999999999875 234799999999999997776643 39999999998754311 111 000
Q ss_pred hhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcc-hHHHHHHH-H----hhHHHHHhccCCCCcEEEEecCCCC
Q 018984 214 NILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPR-LRTALELL-K----TTEGIERRLEKVSLPLLILHGENDT 287 (348)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~----~~~~~~~~~~~i~~P~l~i~g~~D~ 287 (348)
............... .+..... ........ . ......+.+.++++|+|+|||++|.
T Consensus 153 ~~~~~~p~~~lp~~~------------------d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~ 214 (307)
T PRK13604 153 YDYLSLPIDELPEDL------------------DFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDS 214 (307)
T ss_pred cccccCccccccccc------------------ccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCC
Confidence 000000000000000 0000000 00000000 0 0012224566788999999999999
Q ss_pred cCCHHHHHHHHHHhcCCCceEEEcCCCCccccc
Q 018984 288 VTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 320 (348)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 320 (348)
+||.+.++.+++.+++.+++++++||++|.+..
T Consensus 215 lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 215 WVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred ccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 999999999999986668999999999998773
No 41
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.4e-27 Score=202.38 Aligned_cols=259 Identities=19% Similarity=0.177 Sum_probs=146.7
Q ss_pred eeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChh----HHHHHHHH
Q 018984 69 EIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFD----RLVDDVIE 144 (348)
Q Consensus 69 ~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~----~~~~d~~~ 144 (348)
.+.+..+.+. ..+|+|||+||++++... |......|.+ +|+|+++|+||||.|+.+.....+.+ .+++++.+
T Consensus 93 ~~~~~~~~~~--~~~p~vvllHG~~~~~~~-~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~ 168 (402)
T PLN02894 93 FINTVTFDSK--EDAPTLVMVHGYGASQGF-FFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEE 168 (402)
T ss_pred eEEEEEecCC--CCCCEEEEECCCCcchhH-HHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHH
Confidence 6665555322 346899999999988765 5567788865 59999999999999976532211222 23455555
Q ss_pred HHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHH----HHHHHHhhcCCCc
Q 018984 145 HYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQ----ILIGIANILPKHK 220 (348)
Q Consensus 145 ~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 220 (348)
+++.+... +++++||||||.+++.+|.++|++|+++|+++|................ ....+........
T Consensus 169 ~~~~l~~~------~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T PLN02894 169 WRKAKNLS------NFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESN 242 (402)
T ss_pred HHHHcCCC------CeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcC
Confidence 55554333 8999999999999999999999999999999986543221110000000 0000000000000
Q ss_pred ccC------C----CchhHHHHh----chh-h--------hhhhhcccccccCCcchHHHHHHHH-----hhHHHHHhcc
Q 018984 221 LVP------Q----KDLAEAAFR----DLK-N--------RELTKYNVIVYKDKPRLRTALELLK-----TTEGIERRLE 272 (348)
Q Consensus 221 ~~~------~----~~~~~~~~~----~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 272 (348)
..+ . ..+...... ... . .....+................... ...+....+.
T Consensus 243 ~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 322 (402)
T PLN02894 243 FTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESAS 322 (402)
T ss_pred CCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcc
Confidence 000 0 000000000 000 0 0000000000000000000011110 1224445678
Q ss_pred CCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcC
Q 018984 273 KVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 273 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 343 (348)
++++|+++|+|++|.+.+ .....+.+.. .+.+++++++++||+++.|+|++ +.+.+.+|++..+.
T Consensus 323 ~I~vP~liI~G~~D~i~~-~~~~~~~~~~-~~~~~~~~i~~aGH~~~~E~P~~----f~~~l~~~~~~~~~ 387 (402)
T PLN02894 323 EWKVPTTFIYGRHDWMNY-EGAVEARKRM-KVPCEIIRVPQGGHFVFLDNPSG----FHSAVLYACRKYLS 387 (402)
T ss_pred cCCCCEEEEEeCCCCCCc-HHHHHHHHHc-CCCCcEEEeCCCCCeeeccCHHH----HHHHHHHHHHHhcc
Confidence 899999999999998766 4455555554 24588999999999999999999 55555555555443
No 42
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=2.6e-27 Score=200.61 Aligned_cols=241 Identities=20% Similarity=0.217 Sum_probs=160.7
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChh
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFD 136 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 136 (348)
.+...+...+|.+|.+..+.|..+++.|+||++||+++....+|..++..|+++||.|+++|+||+|.|...... .+..
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~-~d~~ 246 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT-QDSS 246 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-ccHH
Confidence 555666667777899999988755567888888887766544477788999999999999999999999653211 1222
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHH----HHHH
Q 018984 137 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQI----LIGI 212 (348)
Q Consensus 137 ~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~----~~~~ 212 (348)
.. ...+++++.....++..+|+++||||||.+++.+|..+|++|+++|+++++...... ........ ...+
T Consensus 247 ~~---~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~--~~~~~~~~p~~~~~~l 321 (414)
T PRK05077 247 LL---HQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT--DPKRQQQVPEMYLDVL 321 (414)
T ss_pred HH---HHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhc--chhhhhhchHHHHHHH
Confidence 22 245666666555556669999999999999999999999999999999987531110 00000000 0000
Q ss_pred HhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhc-cCCCCcEEEEecCCCCcCCH
Q 018984 213 ANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRL-EKVSLPLLILHGENDTVTDP 291 (348)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~P~l~i~g~~D~~~~~ 291 (348)
...+... . .....+......+. ......+ .++++|+|+|+|++|+++|.
T Consensus 322 a~~lg~~----~------------------------~~~~~l~~~l~~~s--l~~~~~l~~~i~~PvLiI~G~~D~ivP~ 371 (414)
T PRK05077 322 ASRLGMH----D------------------------ASDEALRVELNRYS--LKVQGLLGRRCPTPMLSGYWKNDPFSPE 371 (414)
T ss_pred HHHhCCC----C------------------------CChHHHHHHhhhcc--chhhhhhccCCCCcEEEEecCCCCCCCH
Confidence 0000000 0 00000000000000 0000112 57899999999999999999
Q ss_pred HHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 292 SVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
+.++.+.+.. ++.+++++|++ ++.+.+++ +++.+.+||++++
T Consensus 372 ~~a~~l~~~~--~~~~l~~i~~~---~~~e~~~~----~~~~i~~wL~~~l 413 (414)
T PRK05077 372 EDSRLIASSS--ADGKLLEIPFK---PVYRNFDK----ALQEISDWLEDRL 413 (414)
T ss_pred HHHHHHHHhC--CCCeEEEccCC---CccCCHHH----HHHHHHHHHHHHh
Confidence 9999888777 78999999986 34457776 9999999999875
No 43
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=1.7e-28 Score=197.52 Aligned_cols=238 Identities=18% Similarity=0.263 Sum_probs=147.1
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCC-CCCChhHHHHH-HHHHHHHHHcCCCCCCCCe
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHG-YIPSFDRLVDD-VIEHYSNIKEYPEFRTLPS 160 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~d-~~~~l~~l~~~~~~~~~~v 160 (348)
+|+||++||++++... |..+.+.|+ +||+|+++|+||+|.|+.+.. ...++++.+++ +..+++.+..+ ++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIE------PF 72 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCC------eE
Confidence 3679999999998886 889999997 789999999999999976543 33577888888 66666665433 89
Q ss_pred EEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhch-----
Q 018984 161 FLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL----- 235 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 235 (348)
+++|||+||.+++.++.++|+.|++++++++.................. .....+... ....+........
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 148 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDE-QLAQRFEQE---GLEAFLDDWYQQPLFASQ 148 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcch-hhhhHHHhc---CccHHHHHHhcCceeeec
Confidence 9999999999999999999999999999987654322110000000000 000000000 0000000000000
Q ss_pred ---hhhhhhh-cccccccCCcchHHHHHHHH--hhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEE
Q 018984 236 ---KNRELTK-YNVIVYKDKPRLRTALELLK--TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCI 309 (348)
Q Consensus 236 ---~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 309 (348)
....... .................... ...+....+.++++|+++++|++|..++ +..+.+.+.. ++++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~--~~~~~~ 225 (251)
T TIGR03695 149 KNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL--PNLTLV 225 (251)
T ss_pred ccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC--CCCcEE
Confidence 0000000 00000000011111111000 1112334567899999999999998764 4555566655 788999
Q ss_pred EcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 310 LYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 310 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
+++++||++++++|++ +.+.|.+||+
T Consensus 226 ~~~~~gH~~~~e~~~~----~~~~i~~~l~ 251 (251)
T TIGR03695 226 IIANAGHNIHLENPEA----FAKILLAFLE 251 (251)
T ss_pred EEcCCCCCcCccChHH----HHHHHHHHhC
Confidence 9999999999999988 8888988873
No 44
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.96 E-value=5e-27 Score=193.56 Aligned_cols=261 Identities=18% Similarity=0.205 Sum_probs=158.7
Q ss_pred eeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCC-CCCChh
Q 018984 58 EESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHG-YIPSFD 136 (348)
Q Consensus 58 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~ 136 (348)
...++...+|.+|+|..+++++ .++|||+||++++... ..+...+...+|+|+++|+||||.|+.+.. ...+.+
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~---~~~lvllHG~~~~~~~--~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 79 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPD---GKPVVFLHGGPGSGTD--PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTW 79 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCC---CCEEEEECCCCCCCCC--HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHH
Confidence 3456777789999998875332 3569999998776543 234455555689999999999999986542 234678
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHH----HHH-HHH
Q 018984 137 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLV----KQI-LIG 211 (348)
Q Consensus 137 ~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~----~~~-~~~ 211 (348)
++++|+..+++++... +++++||||||.+++.++.++|++|+++|++++........ .+.. ... ...
T Consensus 80 ~~~~dl~~l~~~l~~~------~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~ 151 (306)
T TIGR01249 80 DLVADIEKLREKLGIK------NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEW--SWFYEGGASMIYPDA 151 (306)
T ss_pred HHHHHHHHHHHHcCCC------CEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHH--HHHHhcchhhhCHHH
Confidence 8899999999887655 79999999999999999999999999999998765322110 0000 000 000
Q ss_pred HHhhcCCCcccCC-CchhHHHHhchhh----------hhhhhcc---cccccC-------CcchHHHHHHH---------
Q 018984 212 IANILPKHKLVPQ-KDLAEAAFRDLKN----------RELTKYN---VIVYKD-------KPRLRTALELL--------- 261 (348)
Q Consensus 212 ~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~---~~~~~~-------~~~~~~~~~~~--------- 261 (348)
+............ ..+...+...... .....+. ...... .+.....+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (306)
T TIGR01249 152 WQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKG 231 (306)
T ss_pred HHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhc
Confidence 1111100000000 1111111110000 0000000 000000 01111111110
Q ss_pred --HhhHHHHHhccCC-CCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHH
Q 018984 262 --KTTEGIERRLEKV-SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 338 (348)
Q Consensus 262 --~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 338 (348)
.........+.++ ++|+|+++|++|.++|.+.++.+.+.+ ++.++++++++||.++. ++ ..+.|.+|+
T Consensus 232 ~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~~--~~-----~~~~i~~~~ 302 (306)
T TIGR01249 232 FLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF--PEAELKVTNNAGHSAFD--PN-----NLAALVHAL 302 (306)
T ss_pred hhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCCCC--hH-----HHHHHHHHH
Confidence 0011233456677 699999999999999999999999988 78899999999999863 22 455566665
Q ss_pred hh
Q 018984 339 DD 340 (348)
Q Consensus 339 ~~ 340 (348)
.+
T Consensus 303 ~~ 304 (306)
T TIGR01249 303 ET 304 (306)
T ss_pred HH
Confidence 54
No 45
>PRK10985 putative hydrolase; Provisional
Probab=99.96 E-value=2.9e-27 Score=195.95 Aligned_cols=280 Identities=14% Similarity=0.133 Sum_probs=164.5
Q ss_pred cceeeEEecCCCceeEEEEec-cCCCCCceeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecCCCCccCCCCCCCCC
Q 018984 56 KTEESYEVNSRGVEIFCKSWL-PETSQPKGLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIP 133 (348)
Q Consensus 56 ~~~~~~~~~~~g~~l~~~~~~-p~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~ 133 (348)
......+...||..+.+.... +.....+|+||++||++++... +...++..|.++||+|+++|+||||.+.......+
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~ 109 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIY 109 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceE
Confidence 455667888899877665332 2222347899999999876433 45668889999999999999999997754322111
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCC--cceEEEeCccccccccCCC--hH---HHH
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNA--WSGAILVAPMCKIADDMVP--PF---LVK 206 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~~~--~~---~~~ 206 (348)
.. ...+|+..+++++... .+..+++++||||||.+++.++.++++. ++++|+++++......... .. ...
T Consensus 110 ~~-~~~~D~~~~i~~l~~~--~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~ 186 (324)
T PRK10985 110 HS-GETEDARFFLRWLQRE--FGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQ 186 (324)
T ss_pred CC-CchHHHHHHHHHHHHh--CCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHH
Confidence 22 2367888888887764 2344899999999999988888877543 8899999887653321100 00 000
Q ss_pred H-HHHHHHhhcCC-CcccCCC-chhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEec
Q 018984 207 Q-ILIGIANILPK-HKLVPQK-DLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHG 283 (348)
Q Consensus 207 ~-~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 283 (348)
. +...+...... ....... .......... .....++.........+......+... +....+.++++|+++|+|
T Consensus 187 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~fd~~~~~~~~g~~~~~~~y~~~-~~~~~l~~i~~P~lii~g 263 (324)
T PRK10985 187 RYLLNLLKANAARKLAAYPGTLPINLAQLKSV--RRLREFDDLITARIHGFADAIDYYRQC-SALPLLNQIRKPTLIIHA 263 (324)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCHHHHhcC--CcHHHHhhhheeccCCCCCHHHHHHHC-ChHHHHhCCCCCEEEEec
Confidence 0 00001000000 0000000 0000000000 000000000001111122222222222 234577899999999999
Q ss_pred CCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCCh-hHHHHHHHHHHHHHhhhcC
Q 018984 284 ENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPD-DMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 284 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~i~~fl~~~~~ 343 (348)
++|++++.+....+.+.. +++++++++++||+.+.+..- .-...+-+.+.+|++....
T Consensus 264 ~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 264 KDDPFMTHEVIPKPESLP--PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred CCCCCCChhhChHHHHhC--CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 999999988777665554 788999999999999887421 0113477788888876553
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=3.7e-27 Score=200.66 Aligned_cols=240 Identities=22% Similarity=0.298 Sum_probs=157.8
Q ss_pred ecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHH
Q 018984 63 VNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDV 142 (348)
Q Consensus 63 ~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~ 142 (348)
...++.+++|..+++ ...++|||+||++++... |..+...|.+ +|+|+++|+||||.|...... .+++++++++
T Consensus 114 ~~~~~~~i~~~~~g~---~~~~~vl~~HG~~~~~~~-~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~ 187 (371)
T PRK14875 114 ARIGGRTVRYLRLGE---GDGTPVVLIHGFGGDLNN-WLFNHAALAA-GRPVIALDLPGHGASSKAVGA-GSLDELAAAV 187 (371)
T ss_pred ceEcCcEEEEecccC---CCCCeEEEECCCCCccch-HHHHHHHHhc-CCEEEEEcCCCCCCCCCCCCC-CCHHHHHHHH
Confidence 344677787776543 235789999999998876 7788888865 599999999999999654333 5899999999
Q ss_pred HHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHH---------HHHHHH
Q 018984 143 IEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQ---------ILIGIA 213 (348)
Q Consensus 143 ~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~---------~~~~~~ 213 (348)
.++++.+... +++++|||+||.+++.+|.++|++++++|++++....... ....... ....+.
T Consensus 188 ~~~~~~~~~~------~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 259 (371)
T PRK14875 188 LAFLDALGIE------RAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEI--NGDYIDGFVAAESRRELKPVLE 259 (371)
T ss_pred HHHHHhcCCc------cEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCccc--chhHHHHhhcccchhHHHHHHH
Confidence 9999877544 8999999999999999999999999999999876432211 0010000 000011
Q ss_pred hhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHH--------HhhHHHHHhccCCCCcEEEEecCC
Q 018984 214 NILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELL--------KTTEGIERRLEKVSLPLLILHGEN 285 (348)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~P~l~i~g~~ 285 (348)
........ ....+...... +............. ....+....+.++++|+++++|++
T Consensus 260 ~~~~~~~~-~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~ 324 (371)
T PRK14875 260 LLFADPAL-VTRQMVEDLLK--------------YKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQ 324 (371)
T ss_pred HHhcChhh-CCHHHHHHHHH--------------HhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECC
Confidence 00000000 00000000000 00000000000000 001233446778999999999999
Q ss_pred CCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 286 DTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 286 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
|.++|.+..+.+. .++++.+++++||++++++|++ +.+.|.+||++
T Consensus 325 D~~vp~~~~~~l~-----~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~ 370 (371)
T PRK14875 325 DRIIPAAHAQGLP-----DGVAVHVLPGAGHMPQMEAAAD----VNRLLAEFLGK 370 (371)
T ss_pred CCccCHHHHhhcc-----CCCeEEEeCCCCCChhhhCHHH----HHHHHHHHhcc
Confidence 9999987654432 4688999999999999999988 88999999875
No 47
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=4.2e-27 Score=228.15 Aligned_cols=248 Identities=20% Similarity=0.242 Sum_probs=157.1
Q ss_pred CceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCC-------CCCCChhHHHHHHHHHHHHHHcCCC
Q 018984 82 PKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLH-------GYIPSFDRLVDDVIEHYSNIKEYPE 154 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~-------~~~~~~~~~~~d~~~~l~~l~~~~~ 154 (348)
.+++|||+||++++... |..+...|.+ +|+|+++|+||||.|.... ...++++.+++++.++++.+..+
T Consensus 1370 ~~~~vVllHG~~~s~~~-w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~-- 1445 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGED-WIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG-- 1445 (1655)
T ss_pred CCCeEEEECCCCCCHHH-HHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC--
Confidence 35789999999999886 8889998865 5999999999999997542 12357889999999999987655
Q ss_pred CCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhc
Q 018984 155 FRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRD 234 (348)
Q Consensus 155 ~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (348)
+++|+||||||.+++.++.++|++|+++|++++......... ..............+... ....+...++..
T Consensus 1446 ----~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~-~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~ 1517 (1655)
T PLN02980 1446 ----KVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVA-RKIRSAKDDSRARMLIDH---GLEIFLENWYSG 1517 (1655)
T ss_pred ----CEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHH-HHHHhhhhhHHHHHHHhh---hHHHHHHHhccH
Confidence 899999999999999999999999999999986543221100 000000000000000000 000000000000
Q ss_pred h-----hh-hhhhhcccccc--cCCcchHHHHHHHH--hhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCC
Q 018984 235 L-----KN-RELTKYNVIVY--KDKPRLRTALELLK--TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK 304 (348)
Q Consensus 235 ~-----~~-~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 304 (348)
. .. ........... ............+. ...+..+.+.++++|+|+|+|++|..++ +.+..+.+.+.+.
T Consensus 1518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a 1596 (1655)
T PLN02980 1518 ELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKS 1596 (1655)
T ss_pred HHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccc
Confidence 0 00 00000000000 00000111111111 1123446788999999999999999875 5666677766321
Q ss_pred ----------CceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcCCCC
Q 018984 305 ----------DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSST 346 (348)
Q Consensus 305 ----------~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~ 346 (348)
.+++++++++||.+++|+|++ +.+.|.+||++..++++
T Consensus 1597 ~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~----f~~~I~~FL~~~~~~~~ 1644 (1655)
T PLN02980 1597 KESGNDKGKEIIEIVEIPNCGHAVHLENPLP----VIRALRKFLTRLHNSST 1644 (1655)
T ss_pred ccccccccccceEEEEECCCCCchHHHCHHH----HHHHHHHHHHhccccCC
Confidence 258999999999999999998 99999999998766554
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.95 E-value=4.7e-25 Score=178.22 Aligned_cols=259 Identities=19% Similarity=0.220 Sum_probs=155.5
Q ss_pred eEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcc---cccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChh
Q 018984 60 SYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTC---TFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFD 136 (348)
Q Consensus 60 ~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~---~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~ 136 (348)
......+|.++....+.|.+.. ++.||++||++... ...+..+++.|+++||.|+++|+||||.|.... .+++
T Consensus 4 ~~~~~~~~~~l~g~~~~p~~~~-~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~ 79 (274)
T TIGR03100 4 ALTFSCEGETLVGVLHIPGASH-TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFE 79 (274)
T ss_pred eEEEEcCCcEEEEEEEcCCCCC-CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHH
Confidence 3445667888998888887543 45677778765321 112556789999999999999999999987542 3677
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhc
Q 018984 137 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANIL 216 (348)
Q Consensus 137 ~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (348)
++.+|+.++++++..... ...+++++||||||.+++.++.. +.+|+++|+++|+.......................
T Consensus 80 ~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~- 156 (274)
T TIGR03100 80 GIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA- 156 (274)
T ss_pred HHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh-
Confidence 888999999999875421 12369999999999999999765 457999999998754322111111100000000000
Q ss_pred CC-CcccC-CCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHH
Q 018984 217 PK-HKLVP-QKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVS 294 (348)
Q Consensus 217 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 294 (348)
.. ..... ...+.. ...... ........ ........ ....+....+..+++|+++++|.+|...+ +..
T Consensus 157 ~~~~~~~~g~~~~~~-~~~~~~-~~~~~~~~---~~~~~~~~-----~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~ 225 (274)
T TIGR03100 157 DFWRKLLSGEVNLGS-SLRGLG-DALLKARQ---KGDEVAHG-----GLAERMKAGLERFQGPVLFILSGNDLTAQ-EFA 225 (274)
T ss_pred HHHHHhcCCCccHHH-HHHHHH-HHHHhhhh---cCCCcccc-----hHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHH
Confidence 00 00000 000000 000000 00000000 00000000 01223445677789999999999998763 222
Q ss_pred ------HHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 295 ------KALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 295 ------~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
..+.+.+..++++++.+++++|++..+...+ .+.+.|.+||+
T Consensus 226 ~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~---~v~~~i~~wL~ 273 (274)
T TIGR03100 226 DSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWRE---WVAARTTEWLR 273 (274)
T ss_pred HHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHH---HHHHHHHHHHh
Confidence 3344445457899999999999886655422 39999999996
No 49
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=2.4e-25 Score=174.02 Aligned_cols=262 Identities=16% Similarity=0.163 Sum_probs=170.0
Q ss_pred ceeEEEEe-ccCCCCCceeEEEEecCCCcccccchhHHHHHHhC-CceEEeecCCCCccCCCCCCCCCChhHHHHHHHHH
Q 018984 68 VEIFCKSW-LPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEH 145 (348)
Q Consensus 68 ~~l~~~~~-~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~ 145 (348)
.++.|..+ ...+....|+++++||+.++... |+.+...|+.. |..|+++|.|.||.|...... +...+++|+..+
T Consensus 36 ~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~N-w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~F 112 (315)
T KOG2382|consen 36 VRLAYDSVYSSENLERAPPAIILHGLLGSKEN-WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLF 112 (315)
T ss_pred cccceeeeecccccCCCCceEEecccccCCCC-HHHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHH
Confidence 45666555 44445568999999999999987 89999999875 789999999999999876554 789999999999
Q ss_pred HHHHHcCCCCCCCCeEEEEeChhH-HHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCC-cccC
Q 018984 146 YSNIKEYPEFRTLPSFLFGQSLGG-AVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKH-KLVP 223 (348)
Q Consensus 146 l~~l~~~~~~~~~~v~l~GhS~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 223 (348)
++..+.. ....+++++|||||| .+++..+...|+.+..+|+++-....... ...........+...-... ....
T Consensus 113 i~~v~~~--~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~--~~~e~~e~i~~m~~~d~~~~~~~~ 188 (315)
T KOG2382|consen 113 IDGVGGS--TRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGR--SYGEYRELIKAMIQLDLSIGVSRG 188 (315)
T ss_pred HHHcccc--cccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCc--ccchHHHHHHHHHhcccccccccc
Confidence 9998643 123389999999999 77888888899999999988744321111 1111111111111111110 0011
Q ss_pred CCchhHHHHhchhhhhhhhccc---------ccccCCcchHHHHHHHHh--hHHHHHhc--cCCCCcEEEEecCCCCcCC
Q 018984 224 QKDLAEAAFRDLKNRELTKYNV---------IVYKDKPRLRTALELLKT--TEGIERRL--EKVSLPLLILHGENDTVTD 290 (348)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~i~~P~l~i~g~~D~~~~ 290 (348)
.....+.+...........+.. ..+.....+.....++.. ...+...+ .....||+++.|.++..++
T Consensus 189 rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 189 RKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC
Confidence 1111111111111110101000 011111112222222222 11222223 5668899999999999999
Q ss_pred HHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 291 PSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
.+.-..+.+.+ ++++++.++++||+.+.|+|++ +++.|.+|+.++.
T Consensus 269 ~~~~~~~~~~f--p~~e~~~ld~aGHwVh~E~P~~----~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 269 DEHYPRMEKIF--PNVEVHELDEAGHWVHLEKPEE----FIESISEFLEEPE 314 (315)
T ss_pred hhHHHHHHHhc--cchheeecccCCceeecCCHHH----HHHHHHHHhcccC
Confidence 99888888888 8899999999999999999999 8999999987653
No 50
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=2.6e-26 Score=191.97 Aligned_cols=265 Identities=12% Similarity=0.057 Sum_probs=164.7
Q ss_pred CCceeEEEEeccCCCCCceeEEEEecCCCcc------------cccchhHHH---HHHhCCceEEeecCCCCccCCCC--
Q 018984 66 RGVEIFCKSWLPETSQPKGLVCYCHGYGDTC------------TFFFEGTAR---KLASSGYGVFAMDYPGFGLSAGL-- 128 (348)
Q Consensus 66 ~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~------------~~~~~~~~~---~l~~~g~~vi~~D~~G~G~s~~~-- 128 (348)
...+|.|..|+..+....++||++|+++++. ..||..++- .|....|.||++|..|-|.|..|
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 4578999999887666678999999998753 224655432 34445699999999998753211
Q ss_pred ---------C---------CCCCChhHHHHHHHHHHHHHHcCCCCCCCCeE-EEEeChhHHHHHHHHHhCCCCcceEEEe
Q 018984 129 ---------H---------GYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSF-LFGQSLGGAVALKVHLKQPNAWSGAILV 189 (348)
Q Consensus 129 ---------~---------~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~-l~GhS~Gg~~a~~~a~~~p~~v~~~vl~ 189 (348)
+ ...+++.++++++..+++.++.. ++. ++||||||++++.+|.++|++|+++|++
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~------~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~i 192 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA------RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGV 192 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC------CceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 0 11258999999999999998776 776 9999999999999999999999999999
Q ss_pred CccccccccCCChHHHHHHHHHHHhh--cCCCccc----CCCchh---H---HHHhchh--hhhhhhc---ccc------
Q 018984 190 APMCKIADDMVPPFLVKQILIGIANI--LPKHKLV----PQKDLA---E---AAFRDLK--NRELTKY---NVI------ 246 (348)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~---~---~~~~~~~--~~~~~~~---~~~------ 246 (348)
++........ ...........+... ....... +...+. . ....... ....... ...
T Consensus 193 a~~~~~~~~~-~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~ 271 (389)
T PRK06765 193 IGNPQNDAWT-SVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVS 271 (389)
T ss_pred ecCCCCChhH-HHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCcccccccccccc
Confidence 8764321100 000111111111110 0000000 000000 0 0000000 0000000 000
Q ss_pred ------c--------ccCC---cchHHHHHHHHhh------HHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcC
Q 018984 247 ------V--------YKDK---PRLRTALELLKTT------EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS 303 (348)
Q Consensus 247 ------~--------~~~~---~~~~~~~~~~~~~------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 303 (348)
. +... ..+......+... .++.+.+.++++|+|+|+|++|.++|++..+.+.+.++.
T Consensus 272 ~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~ 351 (389)
T PRK06765 272 TLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQK 351 (389)
T ss_pred chhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhh
Confidence 0 0000 0000111111111 134567789999999999999999999999999888843
Q ss_pred --CCceEEEcCC-CCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 304 --KDKKCILYKD-AFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 304 --~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
++++++++++ +||+.++++|++ +.+.|.+||++.
T Consensus 352 ~~~~a~l~~I~s~~GH~~~le~p~~----~~~~I~~FL~~~ 388 (389)
T PRK06765 352 QGKYAEVYEIESINGHMAGVFDIHL----FEKKIYEFLNRK 388 (389)
T ss_pred cCCCeEEEEECCCCCcchhhcCHHH----HHHHHHHHHccc
Confidence 4689999985 899999999998 899999999763
No 51
>PRK05855 short chain dehydrogenase; Validated
Probab=99.94 E-value=1.8e-25 Score=201.68 Aligned_cols=264 Identities=18% Similarity=0.146 Sum_probs=156.5
Q ss_pred eEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCC-CCCCChhHH
Q 018984 60 SYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLH-GYIPSFDRL 138 (348)
Q Consensus 60 ~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~-~~~~~~~~~ 138 (348)
.+++..+|.+|+|..+++. ..|+|||+||++++... |..+.+.| ..||+|+++|+||||.|+.+. ...++++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~---~~~~ivllHG~~~~~~~-w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP---DRPTVVLVHGYPDNHEV-WDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC---CCCeEEEEcCCCchHHH-HHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 5567789999999988543 25789999999988775 88899998 568999999999999998643 234689999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhC--CCCcceEEEeCccccccc-c----CC---ChHHHHHH
Q 018984 139 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ--PNAWSGAILVAPMCKIAD-D----MV---PPFLVKQI 208 (348)
Q Consensus 139 ~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~~~~-~----~~---~~~~~~~~ 208 (348)
++|+..+++.+... .+++|+||||||.+++.++.+. ++++..++.++++..... . .. .+......
T Consensus 80 a~dl~~~i~~l~~~-----~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (582)
T PRK05855 80 ADDFAAVIDAVSPD-----RPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARA 154 (582)
T ss_pred HHHHHHHHHHhCCC-----CcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHH
Confidence 99999999987643 2599999999999998887662 344444444443211000 0 00 00000000
Q ss_pred HHHHHhhcCCCcccCCCchhHHHHhchhhhhhhh---cccccccCC-------cchHHHHHHHHh---hHHHHHhccCCC
Q 018984 209 LIGIANILPKHKLVPQKDLAEAAFRDLKNRELTK---YNVIVYKDK-------PRLRTALELLKT---TEGIERRLEKVS 275 (348)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~i~ 275 (348)
.......... ............+.......... ......... .........+.. ..........++
T Consensus 155 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (582)
T PRK05855 155 LGQLLRSWYI-YLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTD 233 (582)
T ss_pred HHHHhhhHHH-HHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCcc
Confidence 0000000000 00000000000000000000000 000000000 000000111100 001112244589
Q ss_pred CcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 276 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 276 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
+|+++|+|++|.++|.+..+.+.+.+ ++.++++++ +||+++.++|++ +.+.|.+|+.+.
T Consensus 234 ~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~e~p~~----~~~~i~~fl~~~ 292 (582)
T PRK05855 234 VPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRREIK-AGHWLPMSHPQV----LAAAVAEFVDAV 292 (582)
T ss_pred CceEEEEeCCCcccCHHHhccccccC--CcceEEEcc-CCCcchhhChhH----HHHHHHHHHHhc
Confidence 99999999999999999888887766 677888776 699999999998 888999998764
No 52
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.94 E-value=3.6e-26 Score=163.70 Aligned_cols=242 Identities=15% Similarity=0.121 Sum_probs=162.9
Q ss_pred ecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhC-CceEEeecCCCCccCCCCCCCC--CChhHHH
Q 018984 63 VNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDYPGFGLSAGLHGYI--PSFDRLV 139 (348)
Q Consensus 63 ~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~s~~~~~~~--~~~~~~~ 139 (348)
+..+|.+|.|..++. ....|+++.|.-++...-|.+....|.+. -+.++++|-||+|.|.++.... ..+...+
T Consensus 26 v~vng~ql~y~~~G~----G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da 101 (277)
T KOG2984|consen 26 VHVNGTQLGYCKYGH----GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDA 101 (277)
T ss_pred eeecCceeeeeecCC----CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhH
Confidence 456899999998743 34569999998777655577766666554 3899999999999998776542 1233445
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCC
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKH 219 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (348)
++...+++.|+.. ++.++|||-||..|+.+|+++++.|..+|+.++........ .......+....+.+..
T Consensus 102 ~~avdLM~aLk~~------~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~---~ma~kgiRdv~kWs~r~ 172 (277)
T KOG2984|consen 102 EYAVDLMEALKLE------PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLG---AMAFKGIRDVNKWSARG 172 (277)
T ss_pred HHHHHHHHHhCCC------CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchh---HHHHhchHHHhhhhhhh
Confidence 5666677777666 89999999999999999999999999999998766543321 11111111111111111
Q ss_pred cccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHh------hHHHHHhccCCCCcEEEEecCCCCcCCHHH
Q 018984 220 KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKT------TEGIERRLEKVSLPLLILHGENDTVTDPSV 293 (348)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 293 (348)
+......+....+... +..+.+.... ..--+-.+++++||+|+++|++|++++...
T Consensus 173 R~P~e~~Yg~e~f~~~------------------wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~h 234 (277)
T KOG2984|consen 173 RQPYEDHYGPETFRTQ------------------WAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPH 234 (277)
T ss_pred cchHHHhcCHHHHHHH------------------HHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCC
Confidence 1111111111111000 0000011100 011234678999999999999999999888
Q ss_pred HHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 294 SKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
+..+.... +.+++.++|.++|.+++..+++ +...+.+||++.
T Consensus 235 v~fi~~~~--~~a~~~~~peGkHn~hLrya~e----Fnklv~dFl~~~ 276 (277)
T KOG2984|consen 235 VCFIPVLK--SLAKVEIHPEGKHNFHLRYAKE----FNKLVLDFLKST 276 (277)
T ss_pred ccchhhhc--ccceEEEccCCCcceeeechHH----HHHHHHHHHhcc
Confidence 87777776 7889999999999999988888 999999999753
No 53
>PRK10566 esterase; Provisional
Probab=99.94 E-value=2.5e-24 Score=172.82 Aligned_cols=212 Identities=19% Similarity=0.246 Sum_probs=137.0
Q ss_pred CceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCCh-------hHHHHHHHHHHHHHHcCCC
Q 018984 82 PKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSF-------DRLVDDVIEHYSNIKEYPE 154 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~-------~~~~~d~~~~l~~l~~~~~ 154 (348)
+.|+||++||++++... |..++..|+++||.|+++|+||||.+...... ..+ ....+|+.++++++.....
T Consensus 26 ~~p~vv~~HG~~~~~~~-~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLV-YSYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCEEEEeCCCCcccch-HHHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46899999999988765 78899999999999999999999976322111 111 2335677778888776544
Q ss_pred CCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhc
Q 018984 155 FRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRD 234 (348)
Q Consensus 155 ~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (348)
.+..+++++|||+||.+++.++.++|+....++++++... ...... ..+..... ...
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~---~~~~~~~~-~~~-------- 160 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-----------TSLART---LFPPLIPE-TAA-------- 160 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-----------HHHHHH---hccccccc-ccc--------
Confidence 5566899999999999999999998873333444433210 000000 00000000 000
Q ss_pred hhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCC-CCcEEEEecCCCCcCCHHHHHHHHHHhcCC----CceEE
Q 018984 235 LKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKV-SLPLLILHGENDTVTDPSVSKALYEKASSK----DKKCI 309 (348)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~ 309 (348)
............... +....+.++ ++|+|+++|++|.++|.+.++.+.+.+... +++++
T Consensus 161 ---------------~~~~~~~~~~~~~~~-~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~ 224 (249)
T PRK10566 161 ---------------QQAEFNNIVAPLAEW-EVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCL 224 (249)
T ss_pred ---------------cHHHHHHHHHHHhhc-ChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 000000001111101 112344555 799999999999999999999999888643 35778
Q ss_pred EcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 310 LYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 310 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
.++++||.+. + . ..+.+.+||++++
T Consensus 225 ~~~~~~H~~~---~-~----~~~~~~~fl~~~~ 249 (249)
T PRK10566 225 WEPGVRHRIT---P-E----ALDAGVAFFRQHL 249 (249)
T ss_pred ecCCCCCccC---H-H----HHHHHHHHHHhhC
Confidence 8999999863 2 2 6889999998764
No 54
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=2.2e-24 Score=180.35 Aligned_cols=283 Identities=18% Similarity=0.229 Sum_probs=172.3
Q ss_pred CCccceeeEEecCCCceeEEEEeccCCC----CCceeEEEEecCCCcccccc-----hhHHHHHHhCCceEEeecCCCCc
Q 018984 53 DGLKTEESYEVNSRGVEIFCKSWLPETS----QPKGLVCYCHGYGDTCTFFF-----EGTARKLASSGYGVFAMDYPGFG 123 (348)
Q Consensus 53 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~----~~~~~vv~~HG~~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G 123 (348)
.+...+++.+++.||..|....+.+.+. .++|+|+++||+++++..|. ..++..|+++||+|+++|+||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 4667899999999999999877643221 23678999999988777632 34666788899999999999988
Q ss_pred cCCCC-------CC-CCCChhHHH-HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC---CcceEEEeCc
Q 018984 124 LSAGL-------HG-YIPSFDRLV-DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN---AWSGAILVAP 191 (348)
Q Consensus 124 ~s~~~-------~~-~~~~~~~~~-~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~---~v~~~vl~~~ 191 (348)
.|.+. .. ...++++++ .|+.++++++... ...+++++||||||.+++.++ .+|+ +|+.+++++|
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P 195 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI---TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCP 195 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc---cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcc
Confidence 66321 11 124788887 8999999998653 234899999999999998555 5675 5888999998
Q ss_pred cccccccCCChHHHH---HHHHHHHhhcCCCcccCCCchhHHHHhch---hh------hhhhhcc-----------cccc
Q 018984 192 MCKIADDMVPPFLVK---QILIGIANILPKHKLVPQKDLAEAAFRDL---KN------RELTKYN-----------VIVY 248 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~-----------~~~~ 248 (348)
........ .+.... .....+...+......+............ .. ....... ....
T Consensus 196 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~ 274 (395)
T PLN02872 196 ISYLDHVT-APLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYE 274 (395)
T ss_pred hhhhccCC-CHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcC
Confidence 86543221 111110 01111111122222211111111100000 00 0000000 0000
Q ss_pred cCCcchHHH---HHHHH-------------------hhHHHHHhccCC--CCcEEEEecCCCCcCCHHHHHHHHHHhcCC
Q 018984 249 KDKPRLRTA---LELLK-------------------TTEGIERRLEKV--SLPLLILHGENDTVTDPSVSKALYEKASSK 304 (348)
Q Consensus 249 ~~~~~~~~~---~~~~~-------------------~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 304 (348)
......... ..+.. ......-.++++ ++|+++++|++|.+++++.++.+.+.+++
T Consensus 275 pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~- 353 (395)
T PLN02872 275 PHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS- 353 (395)
T ss_pred CCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC-
Confidence 000001100 00000 000111235666 58999999999999999999999999842
Q ss_pred CceEEEcCCCCccc---ccCCChhHHHHHHHHHHHHHhhhcCCC
Q 018984 305 DKKCILYKDAFHSL---LEGEPDDMIIRVFADIISWLDDHSRSS 345 (348)
Q Consensus 305 ~~~~~~~~~~gH~~---~~~~~~~~~~~~~~~i~~fl~~~~~~~ 345 (348)
..+++.++++||.. ..+.+++ +.+.|.+|++++.+.+
T Consensus 354 ~~~l~~l~~~gH~dfi~~~eape~----V~~~Il~fL~~~~~~~ 393 (395)
T PLN02872 354 KPELLYLENYGHIDFLLSTSAKED----VYNHMIQFFRSLGKSS 393 (395)
T ss_pred ccEEEEcCCCCCHHHHhCcchHHH----HHHHHHHHHHHhhhcc
Confidence 26888899999963 3466776 9999999999876654
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.93 E-value=2.3e-23 Score=174.76 Aligned_cols=275 Identities=15% Similarity=0.107 Sum_probs=160.3
Q ss_pred ceeeEEecCCCceeEEEEeccCCC-CCceeEEEEecCCCccccc----chhHHHHHHhCCceEEeecCCCCccCCCCCCC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETS-QPKGLVCYCHGYGDTCTFF----FEGTARKLASSGYGVFAMDYPGFGLSAGLHGY 131 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~----~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~ 131 (348)
.+...+...++..+.. |.|..+ ..+++||++||+..+...+ ++.+++.|+++||+|+++|++|+|.++..
T Consensus 37 ~~~~~v~~~~~~~l~~--~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~--- 111 (350)
T TIGR01836 37 TPKEVVYREDKVVLYR--YTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY--- 111 (350)
T ss_pred CCCceEEEcCcEEEEE--ecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc---
Confidence 3444555555545544 555432 2355799999975443221 36799999999999999999999987543
Q ss_pred CCChhHHHH-HHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHH--
Q 018984 132 IPSFDRLVD-DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQI-- 208 (348)
Q Consensus 132 ~~~~~~~~~-d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~-- 208 (348)
.++++++. ++.++++++.... +..+++++||||||.+++.++..+|++|+++|+++++................
T Consensus 112 -~~~~d~~~~~~~~~v~~l~~~~--~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~ 188 (350)
T TIGR01836 112 -LTLDDYINGYIDKCVDYICRTS--KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVD 188 (350)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHh--CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccC
Confidence 36777764 4778888877652 34489999999999999999999999999999999887654321110000000
Q ss_pred HHHHHhhcCCC----------cccCCCchhHHHH---hc-hhhhhhhhcc-cccc-cC--CcchHHHHHHHHh----hHH
Q 018984 209 LIGIANILPKH----------KLVPQKDLAEAAF---RD-LKNRELTKYN-VIVY-KD--KPRLRTALELLKT----TEG 266 (348)
Q Consensus 209 ~~~~~~~~~~~----------~~~~~~~~~~~~~---~~-~~~~~~~~~~-~~~~-~~--~~~~~~~~~~~~~----~~~ 266 (348)
........... ...+.......+. .. ........+. ...+ .. ..........+.. ..-
T Consensus 189 ~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l 268 (350)
T TIGR01836 189 IDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGL 268 (350)
T ss_pred HHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcc
Confidence 00000000000 0000000000000 00 0000000000 0000 00 0001111111110 000
Q ss_pred ---------HHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHH
Q 018984 267 ---------IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISW 337 (348)
Q Consensus 267 ---------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 337 (348)
....+.++++|+++++|++|.++|++.++.+.+.+.+.+.++++++ +||..+...+. ..+.+++.|.+|
T Consensus 269 ~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~-~~~~v~~~i~~w 346 (350)
T TIGR01836 269 INGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGK-AQKEVPPAIGKW 346 (350)
T ss_pred cCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECch-hHhhhhHHHHHH
Confidence 0123567899999999999999999999999998866667888887 68877665553 133499999999
Q ss_pred Hhhh
Q 018984 338 LDDH 341 (348)
Q Consensus 338 l~~~ 341 (348)
|.++
T Consensus 347 l~~~ 350 (350)
T TIGR01836 347 LQAR 350 (350)
T ss_pred HHhC
Confidence 9764
No 56
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.93 E-value=1.7e-24 Score=156.93 Aligned_cols=238 Identities=23% Similarity=0.283 Sum_probs=177.2
Q ss_pred ccCCCccceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHH-hCCceEEeecCCCCccCCCC
Q 018984 50 ATCDGLKTEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLA-SSGYGVFAMDYPGFGLSAGL 128 (348)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~-~~g~~vi~~D~~G~G~s~~~ 128 (348)
+...++.+++..+.+.|.+++..+....+ +..|+++++||..++... .-+++.-+- .-+.+|+.+++||+|.|.+.
T Consensus 47 P~~~n~pye~i~l~T~D~vtL~a~~~~~E--~S~pTlLyfh~NAGNmGh-r~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs 123 (300)
T KOG4391|consen 47 PKEFNMPYERIELRTRDKVTLDAYLMLSE--SSRPTLLYFHANAGNMGH-RLPIARVFYVNLKMNVLIVSYRGYGKSEGS 123 (300)
T ss_pred ccccCCCceEEEEEcCcceeEeeeeeccc--CCCceEEEEccCCCcccc-hhhHHHHHHHHcCceEEEEEeeccccCCCC
Confidence 34446778888899999999988766533 368999999999998876 444555443 34799999999999999876
Q ss_pred CCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHH
Q 018984 129 HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQI 208 (348)
Q Consensus 129 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 208 (348)
+ +-+.+.-|...+++++..+...+..+++++|-|.||.+|+.+|++..+++.++|+-+.+...+....+....
T Consensus 124 p----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p--- 196 (300)
T KOG4391|consen 124 P----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP--- 196 (300)
T ss_pred c----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc---
Confidence 4 444556788899999999888888899999999999999999999999999999999877653321110000
Q ss_pred HHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCc
Q 018984 209 LIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTV 288 (348)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 288 (348)
.....+....+ .....-...+.+.+.|.|++.|.+|.+
T Consensus 197 -------------~~~k~i~~lc~-----------------------------kn~~~S~~ki~~~~~P~LFiSGlkDel 234 (300)
T KOG4391|consen 197 -------------FPMKYIPLLCY-----------------------------KNKWLSYRKIGQCRMPFLFISGLKDEL 234 (300)
T ss_pred -------------chhhHHHHHHH-----------------------------HhhhcchhhhccccCceEEeecCcccc
Confidence 00000000000 000011134457789999999999999
Q ss_pred CCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcCC
Q 018984 289 TDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 344 (348)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 344 (348)
+|+...+.+++..++...++..+|++.|.-.+-. +. .++.|.+||.+..+.
T Consensus 235 VPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dG----Yfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 235 VPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC-DG----YFQAIEDFLAEVVKS 285 (300)
T ss_pred CCcHHHHHHHHhCchhhhhheeCCCCccCceEEe-cc----HHHHHHHHHHHhccC
Confidence 9999999999999888899999999999755422 23 899999999987764
No 57
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.92 E-value=5.2e-23 Score=160.44 Aligned_cols=278 Identities=18% Similarity=0.184 Sum_probs=167.2
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcc-cccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCCh
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTC-TFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSF 135 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 135 (348)
.....+.+.||..+-.....++.....|.||++||+.|+. +.|.+.+++.+.++||.|+++++|||+.+.......++.
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~ 128 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHS 128 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecc
Confidence 5555777777766666555544444578999999996554 445677889999999999999999999887643332222
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhH-HHHHHHHHhCCC-CcceEEEeCcccccccc-------CCChH---
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGG-AVALKVHLKQPN-AWSGAILVAPMCKIADD-------MVPPF--- 203 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg-~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~-------~~~~~--- 203 (348)
. +.+|+..++++++.. .+..++..+|.|+|| +++..++.+-.+ .+.+.+.++.+.+.... +....
T Consensus 129 G-~t~D~~~~l~~l~~~--~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r 205 (345)
T COG0429 129 G-ETEDIRFFLDWLKAR--FPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSR 205 (345)
T ss_pred c-chhHHHHHHHHHHHh--CCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHH
Confidence 2 348999999999875 456699999999999 555555443221 35565555554443211 11000
Q ss_pred -HHHHHHHHHHhhcCCCcccCCCchhHH-HHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEE
Q 018984 204 -LVKQILIGIANILPKHKLVPQKDLAEA-AFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLIL 281 (348)
Q Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 281 (348)
....+.......+... ....... .......+....++.........+....++++.... ...+++|.+|+|+|
T Consensus 206 ~l~~~L~~~~~~kl~~l----~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs-~~~L~~Ir~PtLii 280 (345)
T COG0429 206 YLLRNLKRNAARKLKEL----EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASS-LPLLPKIRKPTLII 280 (345)
T ss_pred HHHHHHHHHHHHHHHhc----CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccc-cccccccccceEEE
Confidence 1111111111111111 0000000 000001112222222222222333344444444322 35789999999999
Q ss_pred ecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCC-hhHHHHHHHHHHHHHhhhcC
Q 018984 282 HGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEP-DDMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 282 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~i~~fl~~~~~ 343 (348)
++.+|++++++........ .++++.+..-+.+||.-++... ........+.+.+|++..+.
T Consensus 281 ~A~DDP~~~~~~iP~~~~~-~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 281 NAKDDPFMPPEVIPKLQEM-LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ecCCCCCCChhhCCcchhc-CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 9999999998776665543 3589999999999999887732 22122577889999987654
No 58
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=6.9e-23 Score=154.45 Aligned_cols=220 Identities=25% Similarity=0.364 Sum_probs=161.0
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHh-CCceEEeecCCCCccCCCCCCCCCCh
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLAS-SGYGVFAMDYPGFGLSAGLHGYIPSF 135 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~~~~~~~~ 135 (348)
.+-....+..|..+....+.|+.. ..+++++.||....... ...+...|.. -+++++.+|++|+|.|.+.+..
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~~-~~~~lly~hGNa~Dlgq-~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE---- 108 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPEA-AHPTLLYSHGNAADLGQ-MVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE---- 108 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCccc-cceEEEEcCCcccchHH-HHHHHHHHhhcccceEEEEecccccccCCCccc----
Confidence 445566777787787777776643 46899999999655443 2233334433 3799999999999999987543
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhh
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANI 215 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (348)
....+|+.++.++++...+ +..+|+|+|+|+|...++.+|.+.| ++++||.+|......-..+
T Consensus 109 ~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~-------------- 171 (258)
T KOG1552|consen 109 RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFP-------------- 171 (258)
T ss_pred ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhcc--------------
Confidence 2567899999999998865 6679999999999999999999999 9999999997643221100
Q ss_pred cCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHH
Q 018984 216 LPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSK 295 (348)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 295 (348)
.... . +....+ ...+..+.++||+|++||++|.++|.....
T Consensus 172 --~~~~-------------------~-~~~d~f-----------------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~ 212 (258)
T KOG1552|consen 172 --DTKT-------------------T-YCFDAF-----------------PNIEKISKITCPVLIIHGTDDEVVDFSHGK 212 (258)
T ss_pred --Ccce-------------------E-Eeeccc-----------------cccCcceeccCCEEEEecccCceecccccH
Confidence 0000 0 000000 012567889999999999999999999999
Q ss_pred HHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcCC
Q 018984 296 ALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 344 (348)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 344 (348)
++++..+.+ .+..++.|+||.-..-.|+ +...+.+|+....+.
T Consensus 213 ~Lye~~k~~-~epl~v~g~gH~~~~~~~~-----yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 213 ALYERCKEK-VEPLWVKGAGHNDIELYPE-----YIEHLRRFISSVLPS 255 (258)
T ss_pred HHHHhcccc-CCCcEEecCCCcccccCHH-----HHHHHHHHHHHhccc
Confidence 999998533 5888899999987654444 888888888766544
No 59
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.90 E-value=1.4e-22 Score=180.89 Aligned_cols=247 Identities=21% Similarity=0.234 Sum_probs=166.8
Q ss_pred cceeeEEecCCCceeEEEEeccCCCCC---ceeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecCCCCccCC---CC
Q 018984 56 KTEESYEVNSRGVEIFCKSWLPETSQP---KGLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDYPGFGLSA---GL 128 (348)
Q Consensus 56 ~~~~~~~~~~~g~~l~~~~~~p~~~~~---~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~---~~ 128 (348)
+.+...+...||.+|.++++.|.+..+ .|+||++||.+..... .+....+.|+.+||.|+.+++||.+.-. ..
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 356667788899999999999976543 4899999999744322 2566778899999999999999754321 11
Q ss_pred CCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHH
Q 018984 129 HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQI 208 (348)
Q Consensus 129 ~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 208 (348)
......-....+|+.+.++++.....++..++++.|||+||++++..+.+.| .+++.+...+............
T Consensus 444 ~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~----- 517 (620)
T COG1506 444 AIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGEST----- 517 (620)
T ss_pred hhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccc-----
Confidence 0000112234678888888887777777779999999999999999999988 6888777766543111000000
Q ss_pred HHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCc
Q 018984 209 LIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTV 288 (348)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 288 (348)
. .... ....... .... ....+... .......++++|+|+|||+.|..
T Consensus 518 ---~-~~~~---------~~~~~~~----------------~~~~---~~~~~~~~-sp~~~~~~i~~P~LliHG~~D~~ 564 (620)
T COG1506 518 ---E-GLRF---------DPEENGG----------------GPPE---DREKYEDR-SPIFYADNIKTPLLLIHGEEDDR 564 (620)
T ss_pred ---h-hhcC---------CHHHhCC----------------Cccc---ChHHHHhc-ChhhhhcccCCCEEEEeecCCcc
Confidence 0 0000 0000000 0000 00001111 11235678999999999999999
Q ss_pred CCHHHHHHHHHHhc--CCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcCC
Q 018984 289 TDPSVSKALYEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 344 (348)
Q Consensus 289 ~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 344 (348)
||.++++++.+.++ +..++++++|+.||.+.. |+. ...++..+.+|++++++.
T Consensus 565 v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~-~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 565 VPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR--PEN-RVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC--chh-HHHHHHHHHHHHHHHhcC
Confidence 99999999999886 456889999999999876 332 334899999999998864
No 60
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.90 E-value=4.2e-23 Score=164.03 Aligned_cols=206 Identities=20% Similarity=0.225 Sum_probs=127.9
Q ss_pred ceEEeecCCCCccCCC---CCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEE
Q 018984 112 YGVFAMDYPGFGLSAG---LHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAIL 188 (348)
Q Consensus 112 ~~vi~~D~~G~G~s~~---~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl 188 (348)
|+|+++|+||+|.|++ .....++.+++++++..+++.+..+ +++++||||||.+++.+|.++|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK------KINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS------SEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC------CeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 6899999999999996 4445568899999999999998877 899999999999999999999999999999
Q ss_pred eCccc----cccccCCCh-HHHHHHHHHHHh-hcCCCcccCCCchh-HHHHhch-hhhhhhhcccccccC---CcchHHH
Q 018984 189 VAPMC----KIADDMVPP-FLVKQILIGIAN-ILPKHKLVPQKDLA-EAAFRDL-KNRELTKYNVIVYKD---KPRLRTA 257 (348)
Q Consensus 189 ~~~~~----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~ 257 (348)
++++. ......... ............ .............. ....... ............+.. .......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
T PF00561_consen 75 ISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNM 154 (230)
T ss_dssp ESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHH
T ss_pred EeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhh
Confidence 99862 111111111 000000000000 00000000000000 0000000 000000000000000 0000010
Q ss_pred ---HHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChh
Q 018984 258 ---LELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDD 325 (348)
Q Consensus 258 ---~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 325 (348)
........+....+.++++|+++++|++|.++|++....+.+.+ ++.++++++++||..+.+.|++
T Consensus 155 ~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~ 223 (230)
T PF00561_consen 155 FWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDE 223 (230)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHH
T ss_pred ccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHh
Confidence 11112223445677889999999999999999999999988888 8899999999999999999988
No 61
>PRK11071 esterase YqiA; Provisional
Probab=99.89 E-value=1e-21 Score=149.04 Aligned_cols=184 Identities=18% Similarity=0.163 Sum_probs=119.1
Q ss_pred eeEEEEecCCCcccccch--hHHHHHHh--CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCC
Q 018984 84 GLVCYCHGYGDTCTFFFE--GTARKLAS--SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLP 159 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~--~~~~~l~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 159 (348)
|+||++||++++... |. .+...+.+ .+|+|+++|+||++ ++.++++.++++.+..+ +
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~------~ 62 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGD------P 62 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCC------C
Confidence 579999999999887 44 24455654 37999999999985 34567777777766544 8
Q ss_pred eEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhh
Q 018984 160 SFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRE 239 (348)
Q Consensus 160 v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (348)
++++||||||.+++.+|.++|. .+|+++|..... . . +............
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~------~----~---~~~~~~~~~~~~~--------------- 111 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRPF------E----L---LTDYLGENENPYT--------------- 111 (190)
T ss_pred eEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCHH------H----H---HHHhcCCcccccC---------------
Confidence 9999999999999999999983 468888865311 0 0 0011110000000
Q ss_pred hhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccc
Q 018984 240 LTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLL 319 (348)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 319 (348)
...+.-. .......... +. ..+ +..+|+++++|++|+++|.+.+..+++. ++.++++|++|.+.
T Consensus 112 -----~~~~~~~---~~~~~d~~~~-~~-~~i-~~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~f~ 175 (190)
T PRK11071 112 -----GQQYVLE---SRHIYDLKVM-QI-DPL-ESPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHAFV 175 (190)
T ss_pred -----CCcEEEc---HHHHHHHHhc-CC-ccC-CChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcchh
Confidence 0000000 0011100000 11 112 2677889999999999999999998874 46678899999883
Q ss_pred cCCChhHHHHHHHHHHHHHh
Q 018984 320 EGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 320 ~~~~~~~~~~~~~~i~~fl~ 339 (348)
..++ +.+.+.+|+.
T Consensus 176 --~~~~----~~~~i~~fl~ 189 (190)
T PRK11071 176 --GFER----YFNQIVDFLG 189 (190)
T ss_pred --hHHH----hHHHHHHHhc
Confidence 2244 8899999975
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.89 E-value=4.3e-22 Score=146.18 Aligned_cols=145 Identities=32% Similarity=0.523 Sum_probs=114.7
Q ss_pred eEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEE
Q 018984 85 LVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFG 164 (348)
Q Consensus 85 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~G 164 (348)
+||++||++++... |..+++.|+++||.|+.+|+|++|.+... .++.++++.+..... +..+++++|
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAGYP-DPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHHHC-TCCEEEEEE
T ss_pred CEEEECCCCCCHHH-HHHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhhcC-CCCcEEEEE
Confidence 58999999998776 78999999999999999999999987322 134444444311101 334899999
Q ss_pred eChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcc
Q 018984 165 QSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYN 244 (348)
Q Consensus 165 hS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (348)
||+||.+++.++.+. .+++++|++++...
T Consensus 68 ~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-------------------------------------------------- 96 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PRVKAVVLLSPYPD-------------------------------------------------- 96 (145)
T ss_dssp ETHHHHHHHHHHHHS-TTESEEEEESESSG--------------------------------------------------
T ss_pred EccCcHHHHHHhhhc-cceeEEEEecCccc--------------------------------------------------
Confidence 999999999999988 67999999998311
Q ss_pred cccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcc
Q 018984 245 VIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHS 317 (348)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 317 (348)
...+.+.++|+++++|++|..++.+..+.+++.++ .+.+++++++++|+
T Consensus 97 -----------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 -----------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp -----------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred -----------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 02445677899999999999999999999999985 56899999999995
No 63
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.89 E-value=2.7e-21 Score=156.65 Aligned_cols=282 Identities=13% Similarity=0.162 Sum_probs=170.9
Q ss_pred cCCCccceeeEEecCCCceeEEEEeccCCC------CCceeEEEEecCCCcc-cccchhHHHHHHhCCceEEeecCCCCc
Q 018984 51 TCDGLKTEESYEVNSRGVEIFCKSWLPETS------QPKGLVCYCHGYGDTC-TFFFEGTARKLASSGYGVFAMDYPGFG 123 (348)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~l~~~~~~p~~~------~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~G 123 (348)
....+.+++.++...||..+.+....+... ...|+||++||..+++ +.|.+.++..+.++||+|++++.||+|
T Consensus 87 ~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~ 166 (409)
T KOG1838|consen 87 SKPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLG 166 (409)
T ss_pred CCCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCC
Confidence 344566889999999999999988866544 3479999999996554 456778888888899999999999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC---CcceEEEeCccccc--ccc
Q 018984 124 LSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN---AWSGAILVAPMCKI--ADD 198 (348)
Q Consensus 124 ~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~--~~~ 198 (348)
.+.-.....++ ..+.+|+.+++++++.. ++..++..+|.||||++...+..+..+ .+.++.+++|+... ...
T Consensus 167 g~~LtTpr~f~-ag~t~Dl~~~v~~i~~~--~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~ 243 (409)
T KOG1838|consen 167 GSKLTTPRLFT-AGWTEDLREVVNHIKKR--YPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRS 243 (409)
T ss_pred CCccCCCceee-cCCHHHHHHHHHHHHHh--CCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhH
Confidence 88754433222 23478999999999887 677799999999999999999887543 35566666666532 111
Q ss_pred CC---ChHHHHHH-HHHHHhhcCCCcc--cCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhcc
Q 018984 199 MV---PPFLVKQI-LIGIANILPKHKL--VPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLE 272 (348)
Q Consensus 199 ~~---~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (348)
.. ........ ...+...+...+. ...........+. +...+++.........+....++++.. .....+.
T Consensus 244 ~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~---~SvreFD~~~t~~~~gf~~~deYY~~a-Ss~~~v~ 319 (409)
T KOG1838|consen 244 IETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKS---RSVREFDEALTRPMFGFKSVDEYYKKA-SSSNYVD 319 (409)
T ss_pred HhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhc---CcHHHHHhhhhhhhcCCCcHHHHHhhc-chhhhcc
Confidence 10 01111111 1111111111000 0000011111111 111111111111111222222233222 3346789
Q ss_pred CCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHH-HHHHHhh
Q 018984 273 KVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFAD-IISWLDD 340 (348)
Q Consensus 273 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~-i~~fl~~ 340 (348)
+|++|+|+|++.+|+++|.+.. ...+...++++-+++-..+||.-+++.-........+. +.+|+..
T Consensus 320 ~I~VP~L~ina~DDPv~p~~~i-p~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 320 KIKVPLLCINAADDPVVPEEAI-PIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred cccccEEEEecCCCCCCCcccC-CHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 9999999999999999998633 23334445888888888899998887621111123333 6666654
No 64
>PRK11460 putative hydrolase; Provisional
Probab=99.89 E-value=1.9e-21 Score=152.79 Aligned_cols=183 Identities=16% Similarity=0.119 Sum_probs=128.1
Q ss_pred CCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCC----------CC---CCChhHHHHHHHHHH
Q 018984 80 SQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLH----------GY---IPSFDRLVDDVIEHY 146 (348)
Q Consensus 80 ~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~----------~~---~~~~~~~~~d~~~~l 146 (348)
..+.|+||++||+|++... |..+++.|...++.+..++.+|...+.... .. ...+....+.+.+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~~-~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVA-MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCcEEEEEeCCCCChHH-HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 4457899999999999886 788999998766555555555543221100 00 011233445566666
Q ss_pred HHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCc
Q 018984 147 SNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKD 226 (348)
Q Consensus 147 ~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (348)
+++..+.+.+..+++++|||+||.+++.++.++|+.+.+++.+++.....
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------------------ 141 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------------------ 141 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc------------------------------
Confidence 66665555566689999999999999999999998778787765532100
Q ss_pred hhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcC--C
Q 018984 227 LAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--K 304 (348)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~ 304 (348)
......++|+++++|++|+++|.+.++.+.+.+.. .
T Consensus 142 ------------------------------------------~~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~ 179 (232)
T PRK11460 142 ------------------------------------------PETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG 179 (232)
T ss_pred ------------------------------------------cccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 00012367999999999999999999998888863 3
Q ss_pred CceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcC
Q 018984 305 DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 305 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~ 343 (348)
++++++++++||.+.. + ..+.+.+||.+.+.
T Consensus 180 ~~~~~~~~~~gH~i~~----~----~~~~~~~~l~~~l~ 210 (232)
T PRK11460 180 DVTLDIVEDLGHAIDP----R----LMQFALDRLRYTVP 210 (232)
T ss_pred CeEEEEECCCCCCCCH----H----HHHHHHHHHHHHcc
Confidence 5688889999999853 2 56667777776663
No 65
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.89 E-value=1.6e-21 Score=152.72 Aligned_cols=201 Identities=21% Similarity=0.203 Sum_probs=140.0
Q ss_pred EEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCcc-CCCC-CCCC--------CChhHHHH
Q 018984 71 FCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGL-SAGL-HGYI--------PSFDRLVD 140 (348)
Q Consensus 71 ~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~-s~~~-~~~~--------~~~~~~~~ 140 (348)
..++..|.++.+.|.||++|++.|-... .+.+++.|+++||.|+++|+.+-.. .... .... ...+....
T Consensus 2 ~ay~~~P~~~~~~~~Vvv~~d~~G~~~~-~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 2 DAYVARPEGGGPRPAVVVIHDIFGLNPN-IRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEEETTSSSEEEEEEE-BTTBS-HH-HHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred eEEEEeCCCCCCCCEEEEEcCCCCCchH-HHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 3456677766678999999999877654 6789999999999999999865443 1111 0000 01245677
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCc
Q 018984 141 DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHK 220 (348)
Q Consensus 141 d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (348)
++.+.++++..+......+|.++|+|+||.+++.++.+. ..++++|...|.....
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~------------------------ 135 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPP------------------------ 135 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGG------------------------
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCC------------------------
Confidence 888999999988655666999999999999999999887 5699999887711100
Q ss_pred ccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHH
Q 018984 221 LVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEK 300 (348)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 300 (348)
.......++++|+++++|++|+.++.+..+.+.+.
T Consensus 136 ---------------------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~ 170 (218)
T PF01738_consen 136 ---------------------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEA 170 (218)
T ss_dssp ---------------------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHH
T ss_pred ---------------------------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHH
Confidence 11134567899999999999999999988888877
Q ss_pred hc--CCCceEEEcCCCCcccccCCCh----hHHHHHHHHHHHHHhhhc
Q 018984 301 AS--SKDKKCILYKDAFHSLLEGEPD----DMIIRVFADIISWLDDHS 342 (348)
Q Consensus 301 ~~--~~~~~~~~~~~~gH~~~~~~~~----~~~~~~~~~i~~fl~~~~ 342 (348)
+. +...++++++|++|.+...... ......++.+.+||++++
T Consensus 171 l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 171 LKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 73 4568999999999988765443 357778999999999875
No 66
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.89 E-value=1.6e-21 Score=167.67 Aligned_cols=246 Identities=14% Similarity=0.167 Sum_probs=143.9
Q ss_pred eeEEEEeccCCCC-CceeEEEEecCCCcccccc-----hhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHH-H
Q 018984 69 EIFCKSWLPETSQ-PKGLVCYCHGYGDTCTFFF-----EGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVD-D 141 (348)
Q Consensus 69 ~l~~~~~~p~~~~-~~~~vv~~HG~~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~-d 141 (348)
.+....|.|...+ .+++||++||+...... + +.+++.|.++||+|+++|++|+|.+.... ++++++. +
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yi-lDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~----~~ddY~~~~ 247 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYI-LDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK----TFDDYIRDG 247 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECccccccee-eecccchHHHHHHHHCCcEEEEEECCCCCcccccC----ChhhhHHHH
Confidence 3555666676443 46889999998755443 3 37999999999999999999999886542 3444443 3
Q ss_pred HHHHHHHHHcCCCCCCCCeEEEEeChhHHHHH----HHHHhC-CCCcceEEEeCccccccccCCChHHH-HHHHHHHHhh
Q 018984 142 VIEHYSNIKEYPEFRTLPSFLFGQSLGGAVAL----KVHLKQ-PNAWSGAILVAPMCKIADDMVPPFLV-KQILIGIANI 215 (348)
Q Consensus 142 ~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~----~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 215 (348)
+.+.++.+... .+..+++++||||||.++. .+++.. +++|++++++++..++........+. ......+...
T Consensus 248 i~~al~~v~~~--~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~ 325 (532)
T TIGR01838 248 VIAALEVVEAI--TGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQ 325 (532)
T ss_pred HHHHHHHHHHh--cCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHH
Confidence 55666665433 2334899999999999852 245554 78899999999887765421111110 0111111111
Q ss_pred cCCCcccCCCchhHHHHhchhhh---------------hhhhcccccccCCc-c--hHHHHHHH----Hhh---------
Q 018984 216 LPKHKLVPQKDLAEAAFRDLKNR---------------ELTKYNVIVYKDKP-R--LRTALELL----KTT--------- 264 (348)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~-~--~~~~~~~~----~~~--------- 264 (348)
+......+...+ ...+...... .........+..+. . ......++ ...
T Consensus 326 ~~~~G~lpg~~m-~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v 404 (532)
T TIGR01838 326 NGGGGYLDGRQM-AVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEV 404 (532)
T ss_pred HHhcCCCCHHHH-HHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEE
Confidence 111111111111 1111110000 00001111111110 0 11111111 110
Q ss_pred HHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCCh
Q 018984 265 EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPD 324 (348)
Q Consensus 265 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 324 (348)
.+....+.+|++|++++.|++|.++|++.+..+.+.+ ++.+..+++++||..++++|.
T Consensus 405 ~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i--~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 405 CGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL--GGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC--CCCEEEEECCCCCchHhhCCC
Confidence 0112357789999999999999999999999888888 577888999999999887654
No 67
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.88 E-value=4.1e-20 Score=149.57 Aligned_cols=235 Identities=18% Similarity=0.183 Sum_probs=142.5
Q ss_pred CCccceeeEEecCCCceeEEEEeccCC--CCCceeEEEEecCCCcccccchh--HHHHH-HhCCceEEeecC--CCCccC
Q 018984 53 DGLKTEESYEVNSRGVEIFCKSWLPET--SQPKGLVCYCHGYGDTCTFFFEG--TARKL-ASSGYGVFAMDY--PGFGLS 125 (348)
Q Consensus 53 ~~~~~~~~~~~~~~g~~l~~~~~~p~~--~~~~~~vv~~HG~~~~~~~~~~~--~~~~l-~~~g~~vi~~D~--~G~G~s 125 (348)
.+......+.....+.++.|.+|.|++ .++.|+|+++||++++... |.. ....+ .+.|+.|+++|. +|+|.+
T Consensus 10 ~~~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~-~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~ 88 (275)
T TIGR02821 10 GGTQGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHEN-FMIKAGAQRFAAEHGLALVAPDTSPRGTGIA 88 (275)
T ss_pred CCEEEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccH-HHhhhHHHHHHhhcCcEEEEeCCCCCcCCCC
Confidence 333344455567778889999999974 3457999999999988775 322 22344 446999999998 555433
Q ss_pred CCCC-------------------CCCCChhH-HHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcce
Q 018984 126 AGLH-------------------GYIPSFDR-LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSG 185 (348)
Q Consensus 126 ~~~~-------------------~~~~~~~~-~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~ 185 (348)
.... ...+.+.. .++++..+++.. ...+..+++++||||||.+++.++.++|+.+++
T Consensus 89 ~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~ 165 (275)
T TIGR02821 89 GEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQ---FPLDGERQGITGHSMGGHGALVIALKNPDRFKS 165 (275)
T ss_pred CCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhh---CCCCCCceEEEEEChhHHHHHHHHHhCcccceE
Confidence 2100 00112222 345565555542 123344899999999999999999999999999
Q ss_pred EEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhH
Q 018984 186 AILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTE 265 (348)
Q Consensus 186 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (348)
+++++|....... ... .. .+.. .+.... . ... ... ..
T Consensus 166 ~~~~~~~~~~~~~---~~~-~~---~~~~----------------~l~~~~-~--------------~~~-~~~----~~ 202 (275)
T TIGR02821 166 VSAFAPIVAPSRC---PWG-QK---AFSA----------------YLGADE-A--------------AWR-SYD----AS 202 (275)
T ss_pred EEEECCccCcccC---cch-HH---HHHH----------------Hhcccc-c--------------chh-hcc----hH
Confidence 9999987643211 000 00 0000 000000 0 000 000 00
Q ss_pred HHHHhccCCCCcEEEEecCCCCcCCH-HHHHHHHHHhc--CCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 266 GIERRLEKVSLPLLILHGENDTVTDP-SVSKALYEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 266 ~~~~~~~~i~~P~l~i~g~~D~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
...... ....|+++++|+.|+.++. .....+.+.+. +..+++.++||++|.+.. +...+...++|..++
T Consensus 203 ~~~~~~-~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 203 LLVADG-GRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------IASFIADHLRHHAER 274 (275)
T ss_pred HHHhhc-ccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchh------HHHhHHHHHHHHHhh
Confidence 111111 2467999999999999998 45555555554 244788899999998764 222667777777765
No 68
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.88 E-value=2.7e-21 Score=152.81 Aligned_cols=129 Identities=26% Similarity=0.368 Sum_probs=103.6
Q ss_pred EecCCCceeEEEEeccCCCCCceeEEEEecCCCccc---ccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHH
Q 018984 62 EVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCT---FFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRL 138 (348)
Q Consensus 62 ~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~---~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 138 (348)
+.+.....+.+..+.|....++++|||+||+++... ..|..+++.|+++||.|+++|+||||.|.+.... .+++.+
T Consensus 4 ~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~~~ 82 (266)
T TIGR03101 4 FLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWDVW 82 (266)
T ss_pred EecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHHHH
Confidence 344444456677777765556789999999986432 2366778999889999999999999999765443 478889
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 139 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 139 ~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
++|+..+++++... ...+++++||||||.+++.++.++|++++++|+++|...
T Consensus 83 ~~Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 83 KEDVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999888754 234899999999999999999999999999999998764
No 69
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.88 E-value=2.1e-20 Score=176.24 Aligned_cols=272 Identities=14% Similarity=0.177 Sum_probs=155.3
Q ss_pred eEEecCCCceeEEEEeccCCC-----CCceeEEEEecCCCcccccchh-----HHHHHHhCCceEEeecCCCCccCCCCC
Q 018984 60 SYEVNSRGVEIFCKSWLPETS-----QPKGLVCYCHGYGDTCTFFFEG-----TARKLASSGYGVFAMDYPGFGLSAGLH 129 (348)
Q Consensus 60 ~~~~~~~g~~l~~~~~~p~~~-----~~~~~vv~~HG~~~~~~~~~~~-----~~~~l~~~g~~vi~~D~~G~G~s~~~~ 129 (348)
..+...+- +..+.|.|... ...++|||+||++.+... |+. +.+.|.++||+|+++|+ |.++.+.
T Consensus 41 ~vv~~~~~--~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~-~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~ 114 (994)
T PRK07868 41 QIVESVPM--YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADM-WDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVE 114 (994)
T ss_pred cEEEEcCc--EEEEEeCCCCccccccCCCCcEEEECCCCCCccc-eecCCcccHHHHHHHCCCEEEEEcC---CCCChhH
Confidence 33444444 44455566532 236889999999888766 654 37889899999999995 5565443
Q ss_pred C-CCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhC-CCCcceEEEeCccccccccCC---ChHH
Q 018984 130 G-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ-PNAWSGAILVAPMCKIADDMV---PPFL 204 (348)
Q Consensus 130 ~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~---~~~~ 204 (348)
. ...++.+++..+.+.++.+... ...+++++||||||.+++.+++.+ +++|+++|+++++.++..... +...
T Consensus 115 ~~~~~~l~~~i~~l~~~l~~v~~~---~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~ 191 (994)
T PRK07868 115 GGMERNLADHVVALSEAIDTVKDV---TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGL 191 (994)
T ss_pred cCccCCHHHHHHHHHHHHHHHHHh---hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhh
Confidence 2 2247777777777777665432 123799999999999999988755 568999999988866432210 0000
Q ss_pred HHHHHHHHH-hhcCCCcccCC------------CchhH---HHHhchhhhhh-------hhcc-cccccCCc--chHHHH
Q 018984 205 VKQILIGIA-NILPKHKLVPQ------------KDLAE---AAFRDLKNREL-------TKYN-VIVYKDKP--RLRTAL 258 (348)
Q Consensus 205 ~~~~~~~~~-~~~~~~~~~~~------------~~~~~---~~~~~~~~~~~-------~~~~-~~~~~~~~--~~~~~~ 258 (348)
.......+. ...... ..+. ..... .++........ ..+. ...|...+ ......
T Consensus 192 ~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~ 270 (994)
T PRK07868 192 AAAAADFMADHVFNRL-DIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELL 270 (994)
T ss_pred hhcccccchhhhhhcC-CCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHH
Confidence 000000000 000000 0000 00000 00000000000 0000 00000000 011111
Q ss_pred HHHHhhHHHH----------HhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceE-EEcCCCCcccccCCChhHH
Q 018984 259 ELLKTTEGIE----------RRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKC-ILYKDAFHSLLEGEPDDMI 327 (348)
Q Consensus 259 ~~~~~~~~~~----------~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~~~~~~~ 327 (348)
..+....... ..+.+|++|+|+|+|++|.++|++..+.+.+.+ ++.++ .+++++||+.++--. ...
T Consensus 271 ~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i--~~a~~~~~~~~~GH~g~~~g~-~a~ 347 (994)
T PRK07868 271 KQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA--PNAEVYESLIRAGHFGLVVGS-RAA 347 (994)
T ss_pred HHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEEeCCCCCEeeeech-hhh
Confidence 1111000000 146889999999999999999999999998888 77777 677999998765322 223
Q ss_pred HHHHHHHHHHHhhhcCC
Q 018984 328 IRVFADIISWLDDHSRS 344 (348)
Q Consensus 328 ~~~~~~i~~fl~~~~~~ 344 (348)
+.++..|.+||.++...
T Consensus 348 ~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 348 QQTWPTVADWVKWLEGD 364 (994)
T ss_pred hhhChHHHHHHHHhccC
Confidence 45999999999988754
No 70
>PLN02442 S-formylglutathione hydrolase
Probab=99.88 E-value=2.5e-20 Score=151.01 Aligned_cols=242 Identities=20% Similarity=0.253 Sum_probs=144.6
Q ss_pred cCCCccceeeEEecCCCceeEEEEeccCC--CCCceeEEEEecCCCcccccc--hhHHHHHHhCCceEEeecCCCCcc--
Q 018984 51 TCDGLKTEESYEVNSRGVEIFCKSWLPET--SQPKGLVCYCHGYGDTCTFFF--EGTARKLASSGYGVFAMDYPGFGL-- 124 (348)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~l~~~~~~p~~--~~~~~~vv~~HG~~~~~~~~~--~~~~~~l~~~g~~vi~~D~~G~G~-- 124 (348)
.+.+......+....-|..+.|.+|.|+. +++.|+|+|+||++++...+. ..+...+...|+.|+.+|..++|.
T Consensus 13 ~~~~~~~~~~~~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~ 92 (283)
T PLN02442 13 MFGGFNRRYKHFSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNV 92 (283)
T ss_pred ccCCEEEEEEEeccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCC
Confidence 34444344556666778899999999973 235799999999988766421 224456666799999999887661
Q ss_pred ---CCC------CC-------CC--CCC-hhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcce
Q 018984 125 ---SAG------LH-------GY--IPS-FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSG 185 (348)
Q Consensus 125 ---s~~------~~-------~~--~~~-~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~ 185 (348)
+.. .. .. ... .....+++...++..... .+..+++++||||||..++.++.++|+++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~ 170 (283)
T PLN02442 93 EGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQ--LDTSRASIFGHSMGGHGALTIYLKNPDKYKS 170 (283)
T ss_pred CCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHh--cCCCceEEEEEChhHHHHHHHHHhCchhEEE
Confidence 100 00 00 001 122345555555543221 2334899999999999999999999999999
Q ss_pred EEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhH
Q 018984 186 AILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTE 265 (348)
Q Consensus 186 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (348)
++.+++........ .... .+...+.. .. ..+.... ..
T Consensus 171 ~~~~~~~~~~~~~~---~~~~----~~~~~~g~--------------------------------~~---~~~~~~d-~~ 207 (283)
T PLN02442 171 VSAFAPIANPINCP---WGQK----AFTNYLGS--------------------------------DK---ADWEEYD-AT 207 (283)
T ss_pred EEEECCccCcccCc---hhhH----HHHHHcCC--------------------------------Ch---hhHHHcC-hh
Confidence 99999876532110 0000 00000000 00 0000000 00
Q ss_pred HHHHhccCCCCcEEEEecCCCCcCCHH-HHHHHHHHhc--CCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 266 GIERRLEKVSLPLLILHGENDTVTDPS-VSKALYEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 266 ~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
.....+...++|+++++|++|.+++.. ..+.+.+.+. +.+++++++|+.+|..+ .+...++....|..+++
T Consensus 208 ~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~------~~~~~i~~~~~~~~~~~ 281 (283)
T PLN02442 208 ELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF------FIATFIDDHINHHAQAL 281 (283)
T ss_pred hhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH------HHHHHHHHHHHHHHHHh
Confidence 112334567899999999999998863 2444444443 24588999999999766 22234444455555554
Q ss_pred C
Q 018984 343 R 343 (348)
Q Consensus 343 ~ 343 (348)
+
T Consensus 282 ~ 282 (283)
T PLN02442 282 K 282 (283)
T ss_pred c
Confidence 3
No 71
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.87 E-value=8.4e-21 Score=137.81 Aligned_cols=246 Identities=17% Similarity=0.220 Sum_probs=155.8
Q ss_pred eEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHH
Q 018984 60 SYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRL 138 (348)
Q Consensus 60 ~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 138 (348)
..+....+.++...... .+...++|++||+-++... +...++..|.+.|+.++.+|++|.|+|.+.-.+ ..+...
T Consensus 13 ivi~n~~ne~lvg~lh~---tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~~~e 88 (269)
T KOG4667|consen 13 IVIPNSRNEKLVGLLHE---TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNYNTE 88 (269)
T ss_pred EEeccCCCchhhcceec---cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-Ccccch
Confidence 34444455555543331 2235689999999887653 356678889899999999999999999876443 256667
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCC
Q 018984 139 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK 218 (348)
Q Consensus 139 ~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (348)
++|+..+++++.... ..--+++|||-||.+++.+|.++.+ +..+|.+++-.+...... .......+.++..
T Consensus 89 adDL~sV~q~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~-eRlg~~~l~~ike---- 159 (269)
T KOG4667|consen 89 ADDLHSVIQYFSNSN---RVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN-ERLGEDYLERIKE---- 159 (269)
T ss_pred HHHHHHHHHHhccCc---eEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchh-hhhcccHHHHHHh----
Confidence 899999999997641 1113699999999999999999987 888888877554332110 0000000000000
Q ss_pred CcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCC--CCcEEEEecCCCCcCCHHHHHH
Q 018984 219 HKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKV--SLPLLILHGENDTVTDPSVSKA 296 (348)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~ 296 (348)
.... ......-.....+.....+.+...+..+...+| +||||-+||..|.+||.+.+.+
T Consensus 160 ~Gfi-------------------d~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake 220 (269)
T KOG4667|consen 160 QGFI-------------------DVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE 220 (269)
T ss_pred CCce-------------------ecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH
Confidence 0000 000000000001111111122222333333444 8999999999999999999999
Q ss_pred HHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcCC
Q 018984 297 LYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 344 (348)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 344 (348)
+++.+ ++.++.++||+.|.+...+.+ .......|...+...
T Consensus 221 fAk~i--~nH~L~iIEgADHnyt~~q~~-----l~~lgl~f~k~r~n~ 261 (269)
T KOG4667|consen 221 FAKII--PNHKLEIIEGADHNYTGHQSQ-----LVSLGLEFIKTRINE 261 (269)
T ss_pred HHHhc--cCCceEEecCCCcCccchhhh-----HhhhcceeEEeeecc
Confidence 99999 778999999999988765443 555666666555443
No 72
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.87 E-value=2.5e-21 Score=151.30 Aligned_cols=203 Identities=23% Similarity=0.284 Sum_probs=134.3
Q ss_pred chhHHHHHHhCCceEEeecCCCCccCCCC---CCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHH
Q 018984 100 FEGTARKLASSGYGVFAMDYPGFGLSAGL---HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVH 176 (348)
Q Consensus 100 ~~~~~~~l~~~g~~vi~~D~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a 176 (348)
|......|+++||.|+.+|+||.+..... ......-...++|+.++++++..+..++..+|.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44566888899999999999998754321 111112345688999999999887767777999999999999999999
Q ss_pred HhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHH
Q 018984 177 LKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRT 256 (348)
Q Consensus 177 ~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (348)
.++|++++++|..+|..+.......... +...... .+........
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~----------------------~~~~~~~-------------~~~~~~~~~~ 127 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI----------------------YTKAEYL-------------EYGDPWDNPE 127 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC----------------------HHHGHHH-------------HHSSTTTSHH
T ss_pred cccceeeeeeeccceecchhcccccccc----------------------ccccccc-------------ccCccchhhh
Confidence 9999999999999987764432110000 0000000 0000000000
Q ss_pred HHHHHHhhHHHHHhccC--CCCcEEEEecCCCCcCCHHHHHHHHHHhcC--CCceEEEcCCCCcccccCCChhHHHHHHH
Q 018984 257 ALELLKTTEGIERRLEK--VSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFA 332 (348)
Q Consensus 257 ~~~~~~~~~~~~~~~~~--i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 332 (348)
..... .....+.+ +++|+|+++|++|..||...+..+++.+.. ..++++++|++||.+.. ++. .....+
T Consensus 128 ~~~~~----s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~--~~~-~~~~~~ 200 (213)
T PF00326_consen 128 FYREL----SPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN--PEN-RRDWYE 200 (213)
T ss_dssp HHHHH----HHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS--HHH-HHHHHH
T ss_pred hhhhh----ccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC--chh-HHHHHH
Confidence 00000 11123445 789999999999999999999999988863 45899999999995553 222 225899
Q ss_pred HHHHHHhhhcCC
Q 018984 333 DIISWLDDHSRS 344 (348)
Q Consensus 333 ~i~~fl~~~~~~ 344 (348)
.+.+||+++++.
T Consensus 201 ~~~~f~~~~l~~ 212 (213)
T PF00326_consen 201 RILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHTT-
T ss_pred HHHHHHHHHcCC
Confidence 999999999874
No 73
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.87 E-value=8.8e-21 Score=143.39 Aligned_cols=261 Identities=16% Similarity=0.188 Sum_probs=150.7
Q ss_pred eeEEecCCCceeEEEEeccCC-CCCceeEEEEecCCCcccccchhHHHHHHhC-CceEEeecCCCCccCCCCCCCCCChh
Q 018984 59 ESYEVNSRGVEIFCKSWLPET-SQPKGLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDYPGFGLSAGLHGYIPSFD 136 (348)
Q Consensus 59 ~~~~~~~~g~~l~~~~~~p~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~ 136 (348)
+.-.++.+|..+....|.... ....|.++++||+|.+.-. |..++..+..+ ..+|+++|+||||++........+.+
T Consensus 49 ekedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LS-fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~e 127 (343)
T KOG2564|consen 49 EKEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALS-FAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLE 127 (343)
T ss_pred cccccccCCCcceEEEEEecCCCCCccEEEEeecCcccchh-HHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHH
Confidence 333455555554444443222 3457899999999988776 88899888764 57889999999999987666556999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh--CCCCcceEEEeCccccccccCCChHHHHHHHHHHHh
Q 018984 137 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN 214 (348)
Q Consensus 137 ~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (348)
.++.|+.++++++-.. ...+|+||||||||.+|.+.|.. -|. +.|+++++-+-... ...+..+..
T Consensus 128 T~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtA---------meAL~~m~~ 194 (343)
T KOG2564|consen 128 TMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTA---------MEALNSMQH 194 (343)
T ss_pred HHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHH---------HHHHHHHHH
Confidence 9999999999998744 22379999999999999987764 465 88998887542110 000111111
Q ss_pred hcCCCccc--CCCchhHHHHhc-----hhhhhhhhccc-------ccccCCcchHHHHHHHHh-hHHHHHhccCCCCcEE
Q 018984 215 ILPKHKLV--PQKDLAEAAFRD-----LKNRELTKYNV-------IVYKDKPRLRTALELLKT-TEGIERRLEKVSLPLL 279 (348)
Q Consensus 215 ~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l 279 (348)
++...... .-......-.+. ........... ..|.....+.....+... ...+...+-.+.+|-+
T Consensus 195 fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~kl 274 (343)
T KOG2564|consen 195 FLRNRPKSFKSIEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKL 274 (343)
T ss_pred HHhcCCccccchhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccce
Confidence 11100000 000000000000 00000000000 000000011111111111 1123344456678888
Q ss_pred EEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 280 ILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 280 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
+|.+..|..-..-..-++. ...++.+++.+||+.+.+.|.. +...+..|..++-
T Consensus 275 LilAg~d~LDkdLtiGQMQ-----Gk~Q~~vL~~~GH~v~ED~P~k----va~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 275 LILAGVDRLDKDLTIGQMQ-----GKFQLQVLPLCGHFVHEDSPHK----VAECLCVFWIRNR 328 (343)
T ss_pred eEEecccccCcceeeeeec-----cceeeeeecccCceeccCCcch----HHHHHHHHHhhhc
Confidence 8887777643211111111 3468999999999999999998 8888888876653
No 74
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.87 E-value=4.2e-20 Score=150.32 Aligned_cols=250 Identities=21% Similarity=0.227 Sum_probs=155.1
Q ss_pred cCCCccceeeEEecCCCceeEEEEeccC-CCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCcc-CCCC
Q 018984 51 TCDGLKTEESYEVNSRGVEIFCKSWLPE-TSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGL-SAGL 128 (348)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~l~~~~~~p~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~-s~~~ 128 (348)
+...+......+.+.+|..|+...+.|. ...+.|+||.+||+++.... +... -.++..||.|+.+|.||+|. +...
T Consensus 50 ~~~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~-~~~~-~~~a~~G~~vl~~d~rGqg~~~~d~ 127 (320)
T PF05448_consen 50 PTPGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGD-PFDL-LPWAAAGYAVLAMDVRGQGGRSPDY 127 (320)
T ss_dssp SBSSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGG-HHHH-HHHHHTT-EEEEE--TTTSSSS-B-
T ss_pred CCCCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCC-cccc-cccccCCeEEEEecCCCCCCCCCCc
Confidence 3455667778888999999999999998 55568999999999988655 3333 24678999999999999993 2111
Q ss_pred --------CC----------CCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeC
Q 018984 129 --------HG----------YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVA 190 (348)
Q Consensus 129 --------~~----------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~ 190 (348)
.+ ..+-+..+..|...+++.+...++++..+|.+.|.|+||.+++.+|+..+ +|++++...
T Consensus 128 ~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~v 206 (320)
T PF05448_consen 128 RGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADV 206 (320)
T ss_dssp SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEES
T ss_pred cccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecC
Confidence 00 01113345689999999999988888889999999999999999999887 599999998
Q ss_pred ccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHh
Q 018984 191 PMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERR 270 (348)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (348)
|...-... .+.... ...+... ...+++... .........++.+ .+.|....
T Consensus 207 P~l~d~~~------------~~~~~~---~~~~y~~-~~~~~~~~d------------~~~~~~~~v~~~L-~Y~D~~nf 257 (320)
T PF05448_consen 207 PFLCDFRR------------ALELRA---DEGPYPE-IRRYFRWRD------------PHHEREPEVFETL-SYFDAVNF 257 (320)
T ss_dssp ESSSSHHH------------HHHHT-----STTTHH-HHHHHHHHS------------CTHCHHHHHHHHH-HTT-HHHH
T ss_pred CCccchhh------------hhhcCC---ccccHHH-HHHHHhccC------------CCcccHHHHHHHH-hhhhHHHH
Confidence 86532110 000000 0000000 000110000 0000111111111 22355667
Q ss_pred ccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHH-HHHHHHHHhhh
Q 018984 271 LEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRV-FADIISWLDDH 341 (348)
Q Consensus 271 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~-~~~i~~fl~~~ 341 (348)
...|+||+++-.|-.|.++|+......++.+++ .+++.++|..||.... + . .+...+||.++
T Consensus 258 A~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vyp~~~He~~~----~----~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 258 ARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVYPEYGHEYGP----E----FQEDKQLNFLKEH 320 (320)
T ss_dssp GGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEETT--SSTTH----H----HHHHHHHHHHHH-
T ss_pred HHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEeccCcCCCchh----h----HHHHHHHHHHhcC
Confidence 789999999999999999999999999999964 4899999999997543 2 3 67788998764
No 75
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.87 E-value=1.9e-19 Score=140.62 Aligned_cols=209 Identities=16% Similarity=0.140 Sum_probs=163.5
Q ss_pred ecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCc-cCCCCC----C--C----
Q 018984 63 VNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFG-LSAGLH----G--Y---- 131 (348)
Q Consensus 63 ~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G-~s~~~~----~--~---- 131 (348)
....|.++..+...|....+.|.||++|+..+-... .+.+++.|+..||.|+++|+-+.. .+.... . .
T Consensus 7 ~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~-i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~ 85 (236)
T COG0412 7 IPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNPH-IRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVE 85 (236)
T ss_pred eeCCCceEeEEEecCCcCCCCCEEEEEecccCCchH-HHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhc
Confidence 334447888888888876666999999999887775 889999999999999999988743 222111 0 0
Q ss_pred CCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHH
Q 018984 132 IPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIG 211 (348)
Q Consensus 132 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 211 (348)
..+..+...|+.+.++++..+......+|.++|+||||.+++.++.+.| .+++.+..-+.......
T Consensus 86 ~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~------------- 151 (236)
T COG0412 86 RVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT------------- 151 (236)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc-------------
Confidence 0123678899999999999876566678999999999999999999988 59998888765421110
Q ss_pred HHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCH
Q 018984 212 IANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDP 291 (348)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 291 (348)
....++++|+|+++|+.|..+|.
T Consensus 152 ---------------------------------------------------------~~~~~~~~pvl~~~~~~D~~~p~ 174 (236)
T COG0412 152 ---------------------------------------------------------ADAPKIKVPVLLHLAGEDPYIPA 174 (236)
T ss_pred ---------------------------------------------------------cccccccCcEEEEecccCCCCCh
Confidence 12457899999999999999999
Q ss_pred HHHHHHHHHhcCC--CceEEEcCCCCcccccC-------CChhHHHHHHHHHHHHHhhhcC
Q 018984 292 SVSKALYEKASSK--DKKCILYKDAFHSLLEG-------EPDDMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 292 ~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-------~~~~~~~~~~~~i~~fl~~~~~ 343 (348)
.....+.+.+... .+++.+++++.|.++.+ .........++.+.+||++.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 175 ADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred hHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9888888887644 68899999999988844 2345577799999999998764
No 76
>PLN00021 chlorophyllase
Probab=99.85 E-value=1.1e-19 Score=147.68 Aligned_cols=208 Identities=15% Similarity=0.154 Sum_probs=139.2
Q ss_pred ceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHH
Q 018984 68 VEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYS 147 (348)
Q Consensus 68 ~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 147 (348)
..+.+.++.|..+...|+|||+||++.+... |..+++.|+++||.|+++|++|++.+.. ...+ ++..++++
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~-y~~l~~~Las~G~~VvapD~~g~~~~~~----~~~i----~d~~~~~~ 107 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYNSF-YSQLLQHIASHGFIVVAPQLYTLAGPDG----TDEI----KDAAAVIN 107 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCccc-HHHHHHHHHhCCCEEEEecCCCcCCCCc----hhhH----HHHHHHHH
Confidence 5677888988776678999999999988765 8899999999999999999998653211 1122 23333333
Q ss_pred HHHcC--------CCCCCCCeEEEEeChhHHHHHHHHHhCCC-----CcceEEEeCccccccccC-CChHHHHHHHHHHH
Q 018984 148 NIKEY--------PEFRTLPSFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPMCKIADDM-VPPFLVKQILIGIA 213 (348)
Q Consensus 148 ~l~~~--------~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~-~~~~~~~~~~~~~~ 213 (348)
++... ...+..+++++|||+||.+++.+|..+++ +++++|+++|........ ..+..
T Consensus 108 ~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~i--------- 178 (313)
T PLN00021 108 WLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPV--------- 178 (313)
T ss_pred HHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCcc---------
Confidence 33321 11233489999999999999999998874 589999998875322100 00000
Q ss_pred hhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCC-----c
Q 018984 214 NILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDT-----V 288 (348)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~-----~ 288 (348)
. .......++.+|+|++.+..|. .
T Consensus 179 ------------------l---------------------------------~~~~~s~~~~~P~liig~g~~~~~~~~~ 207 (313)
T PLN00021 179 ------------------L---------------------------------TYAPHSFNLDIPVLVIGTGLGGEPRNPL 207 (313)
T ss_pred ------------------c---------------------------------ccCcccccCCCCeEEEecCCCccccccc
Confidence 0 0001223478999999999763 2
Q ss_pred C----CHH-HHHHHHHHhcCCCceEEEcCCCCcccccCCC-------------------hhHHHHHHHHHHHHHhhhcCC
Q 018984 289 T----DPS-VSKALYEKASSKDKKCILYKDAFHSLLEGEP-------------------DDMIIRVFADIISWLDDHSRS 344 (348)
Q Consensus 289 ~----~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-------------------~~~~~~~~~~i~~fl~~~~~~ 344 (348)
+ |.. ...++++..+ +.+.+.+++++||+-+++.. +...+.+...+..||...+..
T Consensus 208 ~p~~ap~~~~~~~f~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~ 286 (313)
T PLN00021 208 FPPCAPDGVNHAEFFNECK-APAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEG 286 (313)
T ss_pred ccccCCCCCCHHHHHHhcC-CCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 2 233 3356777764 46788889999998776544 234556677778899887765
Q ss_pred C
Q 018984 345 S 345 (348)
Q Consensus 345 ~ 345 (348)
.
T Consensus 287 ~ 287 (313)
T PLN00021 287 D 287 (313)
T ss_pred c
Confidence 4
No 77
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.85 E-value=6.5e-20 Score=149.96 Aligned_cols=235 Identities=20% Similarity=0.204 Sum_probs=139.9
Q ss_pred EEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHH
Q 018984 61 YEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVD 140 (348)
Q Consensus 61 ~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~ 140 (348)
..+...|.+|.+..+.|..+++.|+||++.|..+....++..+.++|+.+|+.++++|.||.|.|....-. .+.+..
T Consensus 168 v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l-- 244 (411)
T PF06500_consen 168 VEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRL-- 244 (411)
T ss_dssp EEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHH--
T ss_pred EEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHH--
Confidence 33444568899988999877788999999999888777666666778899999999999999998643211 232333
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHH----HHHHHHhhc
Q 018984 141 DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQ----ILIGIANIL 216 (348)
Q Consensus 141 d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 216 (348)
..++++++...+.++..+|.++|.|+||++|.++|..++++++++|..+++....-. ....... ....+...+
T Consensus 245 -~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft--~~~~~~~~P~my~d~LA~rl 321 (411)
T PF06500_consen 245 -HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFT--DPEWQQRVPDMYLDVLASRL 321 (411)
T ss_dssp -HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH---HHHHTTS-HHHHHHHHHHC
T ss_pred -HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhc--cHHHHhcCCHHHHHHHHHHh
Confidence 346677777777788889999999999999999999998999999999987542110 0011000 011111111
Q ss_pred CCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHH-HHhc--cCCCCcEEEEecCCCCcCCHHH
Q 018984 217 PKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGI-ERRL--EKVSLPLLILHGENDTVTDPSV 293 (348)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~i~~P~l~i~g~~D~~~~~~~ 293 (348)
.... .........+....-. ...+ .+.++|+|.++|++|+++|.+.
T Consensus 322 G~~~-------------------------------~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD 370 (411)
T PF06500_consen 322 GMAA-------------------------------VSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIED 370 (411)
T ss_dssp T-SC-------------------------------E-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHH
T ss_pred CCcc-------------------------------CCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHH
Confidence 1000 0000000000000000 1133 5678999999999999999999
Q ss_pred HHHHHHHhcCCCceEEEcCCCC-cccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 294 SKALYEKASSKDKKCILYKDAF-HSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
.+-++..- .+.+...++... |.-+. ..+..+.+||++++
T Consensus 371 ~~lia~~s--~~gk~~~~~~~~~~~gy~--------~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 371 SRLIAESS--TDGKALRIPSKPLHMGYP--------QALDEIYKWLEDKL 410 (411)
T ss_dssp HHHHHHTB--TT-EEEEE-SSSHHHHHH--------HHHHHHHHHHHHHH
T ss_pred HHHHHhcC--CCCceeecCCCccccchH--------HHHHHHHHHHHHhc
Confidence 88776654 556677776543 44332 27889999998864
No 78
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.84 E-value=3.4e-19 Score=136.38 Aligned_cols=203 Identities=18% Similarity=0.258 Sum_probs=137.0
Q ss_pred CCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCC
Q 018984 80 SQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLP 159 (348)
Q Consensus 80 ~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 159 (348)
+.+..+||-+||.+|+... |+.+...|.+.|+++|.+++||+|.+.++....++-.+...-+.++++.+... .+
T Consensus 32 gs~~gTVv~~hGsPGSH~D-FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~-----~~ 105 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHND-FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK-----GK 105 (297)
T ss_pred CCCceeEEEecCCCCCccc-hhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC-----Cc
Confidence 4446799999999999887 89999999999999999999999999998887788888888999999998776 27
Q ss_pred eEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhh
Q 018984 160 SFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRE 239 (348)
Q Consensus 160 v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (348)
++++|||.||-.|+.++..+| ..++++++|+.........+.........+...++.. ..........
T Consensus 106 ~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~-------~~~~i~~~~y--- 173 (297)
T PF06342_consen 106 LIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRF-------IINAIMYFYY--- 173 (297)
T ss_pred eEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHH-------HHHHHHHHHH---
Confidence 999999999999999999996 6799999998776655544444444444444433320 0010000000
Q ss_pred hhhcccccccCCcchHHHHHHHH----hhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHh
Q 018984 240 LTKYNVIVYKDKPRLRTALELLK----TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKA 301 (348)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 301 (348)
...................+.. ......+.+.+-++|+++++|.+|.++..+...++...+
T Consensus 174 -~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 174 -RMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred -HHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 0000000000111111111111 111233456666799999999999998877766665443
No 79
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.84 E-value=2.7e-19 Score=145.53 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=142.0
Q ss_pred CCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhC--CceEEeecCCCCccCCCCCCCCCChhHHHHHHH
Q 018984 66 RGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASS--GYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVI 143 (348)
Q Consensus 66 ~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~ 143 (348)
.+..+.|...... .|+|+++||++++... |......+... .|+++.+|+||||.|. .. .......++++.
T Consensus 8 ~~~~~~~~~~~~~----~~~i~~~hg~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~ 79 (282)
T COG0596 8 DGVRLAYREAGGG----GPPLVLLHGFPGSSSV-WRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLA 79 (282)
T ss_pred CCeEEEEeecCCC----CCeEEEeCCCCCchhh-hHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHH
Confidence 4445556554322 4489999999988776 44432333332 1899999999999997 11 134555588899
Q ss_pred HHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCCh------HHHHHHHHHHHhh--
Q 018984 144 EHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPP------FLVKQILIGIANI-- 215 (348)
Q Consensus 144 ~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~------~~~~~~~~~~~~~-- 215 (348)
.+++.+... +++++|||+||.+++.++.++|++++++|++++........... .............
T Consensus 80 ~~~~~~~~~------~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T COG0596 80 ALLDALGLE------KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDA 153 (282)
T ss_pred HHHHHhCCC------ceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccch
Confidence 999987765 69999999999999999999999999999999765411100000 0000000000000
Q ss_pred cCCCcccCCCchhHHHHhch---hhhhhhhcccccc----cCCc--chHHHHHHHHhhHHHHHhccCCCCcEEEEecCCC
Q 018984 216 LPKHKLVPQKDLAEAAFRDL---KNRELTKYNVIVY----KDKP--RLRTALELLKTTEGIERRLEKVSLPLLILHGEND 286 (348)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 286 (348)
.................... ............. .... ............ ........+++|+++++|++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~d 232 (282)
T COG0596 154 AAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDR-DLRAALARITVPTLIIHGEDD 232 (282)
T ss_pred hhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhccccc-ccchhhccCCCCeEEEecCCC
Confidence 00000000000000000000 0000000000000 0000 000000000000 122456678899999999999
Q ss_pred CcCCHHHHHHHHHHhcCC-CceEEEcCCCCcccccCCChhHHHHHHHHHHHHH
Q 018984 287 TVTDPSVSKALYEKASSK-DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 338 (348)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl 338 (348)
.+.|......+.+.. + ..++.+++++||..+.++|+. +.+.+.+|+
T Consensus 233 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~p~~----~~~~i~~~~ 279 (282)
T COG0596 233 PVVPAELARRLAAAL--PNDARLVVIPGAGHFPHLEAPEA----FAAALLAFL 279 (282)
T ss_pred CcCCHHHHHHHHhhC--CCCceEEEeCCCCCcchhhcHHH----HHHHHHHHH
Confidence 777766655566666 4 489999999999999999997 677776644
No 80
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.84 E-value=1.7e-19 Score=159.80 Aligned_cols=132 Identities=17% Similarity=0.146 Sum_probs=107.6
Q ss_pred ecCCCceeEEEEeccCCCCCceeEEEEecCCCccc---ccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHH
Q 018984 63 VNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCT---FFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLV 139 (348)
Q Consensus 63 ~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~---~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 139 (348)
.+.||.+|++..|.|.+..+.|+||++||++.+.. .+.......|+++||.|+++|+||+|.|.+..... + ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-cccc
Confidence 45789999999999976667899999999987642 11223556788999999999999999998764332 2 5678
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccc
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIAD 197 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 197 (348)
+|+.++++++..+... +.+|+++|||+||.+++.+|..+|++++++|..++..+...
T Consensus 80 ~D~~~~i~~l~~q~~~-~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWC-DGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred hHHHHHHHHHHhCCCC-CCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 9999999999887443 35899999999999999999999999999999988766443
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.82 E-value=4.5e-19 Score=138.06 Aligned_cols=120 Identities=18% Similarity=0.276 Sum_probs=88.0
Q ss_pred EEeccCC-CCCceeEEEEecCCCcccccch---hHHHHHHhCCceEEeecCCCCccCCCCCCCC-----CChhHHHHHHH
Q 018984 73 KSWLPET-SQPKGLVCYCHGYGDTCTFFFE---GTARKLASSGYGVFAMDYPGFGLSAGLHGYI-----PSFDRLVDDVI 143 (348)
Q Consensus 73 ~~~~p~~-~~~~~~vv~~HG~~~~~~~~~~---~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~-----~~~~~~~~d~~ 143 (348)
.+|.|++ ..+.|+||++||.+++... +. .+...+.+.||.|+++|++|++.+....... ........++.
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~-~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASA-YVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLH 80 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHH-HhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHH
Confidence 4566764 3457999999999977654 22 3555555679999999999987543211100 01123466777
Q ss_pred HHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccc
Q 018984 144 EHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 193 (348)
Q Consensus 144 ~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 193 (348)
.+++++..+...+..+++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 81 ~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 81 QLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 88888877655666789999999999999999999999999998888654
No 82
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.81 E-value=2.9e-18 Score=122.87 Aligned_cols=197 Identities=18% Similarity=0.238 Sum_probs=139.5
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCC---Ccccc-cchhHHHHHHhCCceEEeecCCCCccCCCCCCCC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYG---DTCTF-FFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYI 132 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~---~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~ 132 (348)
+++.++...-| ++..+. .|......|+.|++|.-+ ++... -...++..|.+.||.++.+|+||.|.|.+..+.
T Consensus 4 ~~~v~i~Gp~G-~le~~~-~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~- 80 (210)
T COG2945 4 MPTVIINGPAG-RLEGRY-EPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN- 80 (210)
T ss_pred CCcEEecCCcc-cceecc-CCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC-
Confidence 33444444444 344433 333345578899999754 22211 134567788889999999999999999987553
Q ss_pred CChhHHHHHHHHHHHHHHcCCCCCCCCe-EEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHH
Q 018984 133 PSFDRLVDDVIEHYSNIKEYPEFRTLPS-FLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIG 211 (348)
Q Consensus 133 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v-~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 211 (348)
.+.+ .+|..++++|++.+. +..+. .+.|+|+|+++++.+|.+.|+ ....+.+.|.....
T Consensus 81 -GiGE-~~Da~aaldW~~~~h--p~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~--------------- 140 (210)
T COG2945 81 -GIGE-LEDAAAALDWLQARH--PDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY--------------- 140 (210)
T ss_pred -Ccch-HHHHHHHHHHHHhhC--CCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch---------------
Confidence 3333 678999999999873 33343 689999999999999999987 55666655544210
Q ss_pred HHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCH
Q 018984 212 IANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDP 291 (348)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 291 (348)
+ ...+....+|.++|+|+.|.+++.
T Consensus 141 ------------------------------------------------------d-fs~l~P~P~~~lvi~g~~Ddvv~l 165 (210)
T COG2945 141 ------------------------------------------------------D-FSFLAPCPSPGLVIQGDADDVVDL 165 (210)
T ss_pred ------------------------------------------------------h-hhhccCCCCCceeEecChhhhhcH
Confidence 0 024456778999999999999998
Q ss_pred HHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 292 SVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
.....+.+. ...+++++++++|+++..- .. +.+.+.+|+.
T Consensus 166 ~~~l~~~~~---~~~~~i~i~~a~HFF~gKl-~~----l~~~i~~~l~ 205 (210)
T COG2945 166 VAVLKWQES---IKITVITIPGADHFFHGKL-IE----LRDTIADFLE 205 (210)
T ss_pred HHHHHhhcC---CCCceEEecCCCceecccH-HH----HHHHHHHHhh
Confidence 877776665 4578899999999998643 33 8888999985
No 83
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.3e-18 Score=138.43 Aligned_cols=262 Identities=15% Similarity=0.200 Sum_probs=155.6
Q ss_pred CCCceeEEEEeccCCCCCceeEEEEecCCCcccc----------cchhHH---HHHHhCCceEEeecCCCCc-cCCCCC-
Q 018984 65 SRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF----------FFEGTA---RKLASSGYGVFAMDYPGFG-LSAGLH- 129 (348)
Q Consensus 65 ~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~----------~~~~~~---~~l~~~g~~vi~~D~~G~G-~s~~~~- 129 (348)
.++..|.|..|+..+....++||++|++.++... ||..++ +.+....|.||+.|..|.+ .|.+|.
T Consensus 33 l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s 112 (368)
T COG2021 33 LSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS 112 (368)
T ss_pred ccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC
Confidence 3567899999987776667899999999885432 455443 1233345999999999976 444331
Q ss_pred ---C--------CCCChhHHHHHHHHHHHHHHcCCCCCCCCeE-EEEeChhHHHHHHHHHhCCCCcceEEEeCccccccc
Q 018984 130 ---G--------YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSF-LFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIAD 197 (348)
Q Consensus 130 ---~--------~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~-l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 197 (348)
. ...++.++++--..+++.++.. ++. +||-||||+.++.++..+|++|+.+|.+++......
T Consensus 113 ~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~------~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~ 186 (368)
T COG2021 113 INPGGKPYGSDFPVITIRDMVRAQRLLLDALGIK------KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSA 186 (368)
T ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHHhcCcc------eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCH
Confidence 1 1236677777777788888876 665 999999999999999999999999999987554322
Q ss_pred cCCChHHHHHHHHHHHhhcCCCc---c----cCCCchh------HHHHhchhh------h-----------------hhh
Q 018984 198 DMVPPFLVKQILIGIANILPKHK---L----VPQKDLA------EAAFRDLKN------R-----------------ELT 241 (348)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~------~~~~~~~~~------~-----------------~~~ 241 (348)
.... ...........-+... . .+...+. ...++.... + ...
T Consensus 187 ~~ia---~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL 263 (368)
T COG2021 187 QNIA---FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYL 263 (368)
T ss_pred HHHH---HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHH
Confidence 1000 0000110000001000 0 0000000 000000000 0 000
Q ss_pred hcccccccCCcchHHHHHHHHh---------hHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEc-
Q 018984 242 KYNVIVYKDKPRLRTALELLKT---------TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILY- 311 (348)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~- 311 (348)
.+....+........++.+.+. ..++...++++++|++++.-+.|.+.|++..+++.+.++...+ ++++
T Consensus 264 ~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~ 342 (368)
T COG2021 264 DYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREID 342 (368)
T ss_pred HHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEec
Confidence 0000000000000001111111 1234456888999999999999999999999999999954443 6555
Q ss_pred CCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 312 KDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 312 ~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
...||.-++...+. +...|.+||+.
T Consensus 343 S~~GHDaFL~e~~~----~~~~i~~fL~~ 367 (368)
T COG2021 343 SPYGHDAFLVESEA----VGPLIRKFLAL 367 (368)
T ss_pred CCCCchhhhcchhh----hhHHHHHHhhc
Confidence 46799988876665 77888888864
No 84
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.81 E-value=2.4e-18 Score=134.98 Aligned_cols=257 Identities=18% Similarity=0.219 Sum_probs=102.8
Q ss_pred EEeccCCCCCceeEEEEecCCCccc--ccchhHHHHHHhCCceEEeecCC----CCccCCCCCCCCCChhHHHHHHHHHH
Q 018984 73 KSWLPETSQPKGLVCYCHGYGDTCT--FFFEGTARKLASSGYGVFAMDYP----GFGLSAGLHGYIPSFDRLVDDVIEHY 146 (348)
Q Consensus 73 ~~~~p~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~vi~~D~~----G~G~s~~~~~~~~~~~~~~~d~~~~l 146 (348)
..|.+.+......||||.|.+.... .|...+++.|...||.++-+-++ |+|. .+++.-++|+.+++
T Consensus 23 fe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~--------~SL~~D~~eI~~~v 94 (303)
T PF08538_consen 23 FEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT--------SSLDRDVEEIAQLV 94 (303)
T ss_dssp EEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHH
T ss_pred EEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc--------chhhhHHHHHHHHH
Confidence 3344333335678999999975432 35778888897779999999865 3343 38999999999999
Q ss_pred HHHHcCCC--CCCCCeEEEEeChhHHHHHHHHHhCC-----CCcceEEEeCccccccccCCChHH---HHHHHHHHHhhc
Q 018984 147 SNIKEYPE--FRTLPSFLFGQSLGGAVALKVHLKQP-----NAWSGAILVAPMCKIADDMVPPFL---VKQILIGIANIL 216 (348)
Q Consensus 147 ~~l~~~~~--~~~~~v~l~GhS~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 216 (348)
++++.... ....+|+|+|||.|+.-+++|+.... ..|+++||-+|+.+.......... ...........+
T Consensus 95 ~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i 174 (303)
T PF08538_consen 95 EYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELI 174 (303)
T ss_dssp HHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHH
T ss_pred HHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHH
Confidence 99987631 23458999999999999999987652 569999999998875543332222 333333333322
Q ss_pred CCCcccCCCchhHHHHhchh-hhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHH-H
Q 018984 217 PKHKLVPQKDLAEAAFRDLK-NRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSV-S 294 (348)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~ 294 (348)
...+.. ..+......... ......+..........-...+........+...+..+++|+|++.+.+|.++|... .
T Consensus 175 ~~g~~~--~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk 252 (303)
T PF08538_consen 175 AEGKGD--EILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDK 252 (303)
T ss_dssp HCT-TT---GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------
T ss_pred HcCCCC--ceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccc
Confidence 111100 000000000000 001111111111111122222333333345667888999999999999999998753 2
Q ss_pred HHHHHHhcC-CC-----ceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 295 KALYEKASS-KD-----KKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 295 ~~~~~~~~~-~~-----~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
+.+.+++.. .+ ....++||++|.+-.+..++..+.+.+.+..||+
T Consensus 253 ~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 253 EALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 334444421 11 2245889999998765544444557888888874
No 85
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.80 E-value=1.9e-18 Score=134.83 Aligned_cols=187 Identities=22% Similarity=0.280 Sum_probs=114.4
Q ss_pred CCCCCceeEEEEecCCCcccccchhHHH-HHHhCCceEEeecCCC------Ccc---CCCC-----CC---CCCChhHHH
Q 018984 78 ETSQPKGLVCYCHGYGDTCTFFFEGTAR-KLASSGYGVFAMDYPG------FGL---SAGL-----HG---YIPSFDRLV 139 (348)
Q Consensus 78 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~-~l~~~g~~vi~~D~~G------~G~---s~~~-----~~---~~~~~~~~~ 139 (348)
++++..++||++||+|.+... +..+.. .+...+..++.++-|. .|. +.-. .. ....+...+
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~-~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDL-FALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHH-HHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCCCceEEEEECCCCCCcch-hHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 345568999999999988754 444433 2222356777776542 122 1111 00 011234445
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCC
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKH 219 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (348)
+.+.++|+..... .++..+|+++|+|+||++++.++.++|+.+.++|.+++.........
T Consensus 88 ~~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~------------------- 147 (216)
T PF02230_consen 88 ERLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE------------------- 147 (216)
T ss_dssp HHHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH-------------------
T ss_pred HHHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc-------------------
Confidence 5666777765443 35666899999999999999999999999999999998753221100
Q ss_pred cccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhcc-CCCCcEEEEecCCCCcCCHHHHHHHH
Q 018984 220 KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLE-KVSLPLLILHGENDTVTDPSVSKALY 298 (348)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~P~l~i~g~~D~~~~~~~~~~~~ 298 (348)
.... .-++|++++||.+|+++|.+.++...
T Consensus 148 -------------------------------------------------~~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~ 178 (216)
T PF02230_consen 148 -------------------------------------------------DRPEALAKTPILIIHGDEDPVVPFEWAEKTA 178 (216)
T ss_dssp -------------------------------------------------CCHCCCCTS-EEEEEETT-SSSTHHHHHHHH
T ss_pred -------------------------------------------------ccccccCCCcEEEEecCCCCcccHHHHHHHH
Confidence 0011 11689999999999999999998888
Q ss_pred HHhcC--CCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 299 EKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 299 ~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
+.+.. .+++++.+++.||.+.. + .++.+.+||+++.
T Consensus 179 ~~L~~~~~~v~~~~~~g~gH~i~~----~----~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 179 EFLKAAGANVEFHEYPGGGHEISP----E----ELRDLREFLEKHI 216 (216)
T ss_dssp HHHHCTT-GEEEEEETT-SSS--H----H----HHHHHHHHHHHH-
T ss_pred HHHHhcCCCEEEEEcCCCCCCCCH----H----HHHHHHHHHhhhC
Confidence 88864 35789999999998753 2 6888999998763
No 86
>PRK10162 acetyl esterase; Provisional
Probab=99.80 E-value=8e-17 Score=132.91 Aligned_cols=245 Identities=18% Similarity=0.208 Sum_probs=144.2
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCC---CcccccchhHHHHHHh-CCceEEeecCCCCccCCCCCCCC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYG---DTCTFFFEGTARKLAS-SGYGVFAMDYPGFGLSAGLHGYI 132 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~~~~~ 132 (348)
.++..+...+| .+..++|.|.. ...|+||++||+| ++... +..++..|++ .|+.|+++|+|...+.
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~~-~~~~~~~la~~~g~~Vv~vdYrlape~------- 126 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQP-DSQATLFYLHGGGFILGNLDT-HDRIMRLLASYSGCTVIGIDYTLSPEA------- 126 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCC-CCCCEEEEEeCCcccCCCchh-hhHHHHHHHHHcCCEEEEecCCCCCCC-------
Confidence 34444444555 68889998864 3468999999987 33343 6678888877 4999999999965432
Q ss_pred CChhHHHHHHHHHHHHHHcC---CCCCCCCeEEEEeChhHHHHHHHHHhC------CCCcceEEEeCccccccccCCChH
Q 018984 133 PSFDRLVDDVIEHYSNIKEY---PEFRTLPSFLFGQSLGGAVALKVHLKQ------PNAWSGAILVAPMCKIADDMVPPF 203 (348)
Q Consensus 133 ~~~~~~~~d~~~~l~~l~~~---~~~~~~~v~l~GhS~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~ 203 (348)
.+....+|+.++++++... .+.+..+++|+|+|+||.+++.++.+. +.+++++|++.|..+.... ..
T Consensus 127 -~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~---~s 202 (318)
T PRK10162 127 -RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS---VS 202 (318)
T ss_pred -CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC---hh
Confidence 2223356666666666432 234455899999999999999988653 3578999999987654211 00
Q ss_pred HHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEec
Q 018984 204 LVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHG 283 (348)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 283 (348)
. . .. ........... ...+......... . ...+... .....+.+--.|+++++|
T Consensus 203 ~-~----~~---~~~~~~l~~~~-~~~~~~~y~~~~~------~-~~~p~~~----------p~~~~l~~~lPp~~i~~g 256 (318)
T PRK10162 203 R-R----LL---GGVWDGLTQQD-LQMYEEAYLSNDA------D-RESPYYC----------LFNNDLTRDVPPCFIAGA 256 (318)
T ss_pred H-H----Hh---CCCccccCHHH-HHHHHHHhCCCcc------c-cCCcccC----------cchhhhhcCCCCeEEEec
Confidence 0 0 00 00000000000 0000000000000 0 0000000 000122122359999999
Q ss_pred CCCCcCCHHHHHHHHHHhcC--CCceEEEcCCCCcccccCC-ChhHHHHHHHHHHHHHhhhcC
Q 018984 284 ENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHSLLEGE-PDDMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 284 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~~~~~ 343 (348)
+.|.+.+ ..+.+.+++.. ..+++++++|..|.+..-. .-......++.+.+||.+.++
T Consensus 257 ~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 257 EFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 9999875 45566666653 4588999999999765432 223355688999999988764
No 87
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=2.5e-17 Score=123.80 Aligned_cols=221 Identities=18% Similarity=0.236 Sum_probs=138.2
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHH-HHcCCCCCCCCeE
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSN-IKEYPEFRTLPSF 161 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~-l~~~~~~~~~~v~ 161 (348)
++.++++|-.|++... |+.+...|.. .+.++++++||+|.--..... .+++++++.+...+.. .. ..++.
T Consensus 7 ~~~L~cfP~AGGsa~~-fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~~------d~P~a 77 (244)
T COG3208 7 RLRLFCFPHAGGSASL-FRSWSRRLPA-DIELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPLL------DAPFA 77 (244)
T ss_pred CceEEEecCCCCCHHH-HHHHHhhCCc-hhheeeecCCCcccccCCccc-ccHHHHHHHHHHHhccccC------CCCee
Confidence 5668888878877775 8899888855 499999999999977554433 4888888888887773 33 33899
Q ss_pred EEEeChhHHHHHHHHHhCC---CCcceEEEeCcccccccc--CCChHHHHHHHHHHHhhcCCC-cccCCCchhHHHHhch
Q 018984 162 LFGQSLGGAVALKVHLKQP---NAWSGAILVAPMCKIADD--MVPPFLVKQILIGIANILPKH-KLVPQKDLAEAAFRDL 235 (348)
Q Consensus 162 l~GhS~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 235 (348)
++||||||++|.++|.+.. ..+.++.+.+........ ......-..++..+..+-... .......+...+.
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~L--- 154 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFL--- 154 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHH---
Confidence 9999999999999997642 225667766644331111 011111122222222222111 1111111111111
Q ss_pred hhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCC
Q 018984 236 KNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAF 315 (348)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 315 (348)
+.+++.+.....+.- ..-..+.||+.++.|++|..+..+....+.+..+ ...++.+++| |
T Consensus 155 ----------------PilRAD~~~~e~Y~~--~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fdG-g 214 (244)
T COG3208 155 ----------------PILRADFRALESYRY--PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFDG-G 214 (244)
T ss_pred ----------------HHHHHHHHHhccccc--CCCCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEecC-c
Confidence 112222222221111 1225789999999999999999998888777763 5789999996 7
Q ss_pred cccccCCChhHHHHHHHHHHHHHh
Q 018984 316 HSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 316 H~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
|++..++.++ +...|.+.+.
T Consensus 215 HFfl~~~~~~----v~~~i~~~l~ 234 (244)
T COG3208 215 HFFLNQQREE----VLARLEQHLA 234 (244)
T ss_pred ceehhhhHHH----HHHHHHHHhh
Confidence 9999888777 6666666554
No 88
>PRK10115 protease 2; Provisional
Probab=99.77 E-value=8.4e-17 Score=144.86 Aligned_cols=229 Identities=17% Similarity=0.201 Sum_probs=150.7
Q ss_pred CccceeeEEecCCCceeEEE-EeccC--CCCCceeEEEEecCCCccc-ccchhHHHHHHhCCceEEeecCCCCccCCCCC
Q 018984 54 GLKTEESYEVNSRGVEIFCK-SWLPE--TSQPKGLVCYCHGYGDTCT-FFFEGTARKLASSGYGVFAMDYPGFGLSAGLH 129 (348)
Q Consensus 54 ~~~~~~~~~~~~~g~~l~~~-~~~p~--~~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~ 129 (348)
....+...+.+.||.+|.+. ++.|. ...+.|+||++||..+... ..|......|+++||.|+.++.||-|.-....
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w 492 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQW 492 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHH
Confidence 34567777889999999984 45453 2344799999999875542 23556667888999999999999976543211
Q ss_pred ---CCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHH
Q 018984 130 ---GYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVK 206 (348)
Q Consensus 130 ---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 206 (348)
.....=....+|+.+.++++..+...+..++.+.|.|.||+++..++.++|++++++|...|..+........
T Consensus 493 ~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~---- 568 (686)
T PRK10115 493 YEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDE---- 568 (686)
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccC----
Confidence 0000111236778888888877765667799999999999999999999999999999999987643211000
Q ss_pred HHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCc-EEEEecCC
Q 018984 207 QILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLP-LLILHGEN 285 (348)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~ 285 (348)
.++. ... .+. .+. .+.-......+.....+ ..+.+++.| +|+++|.+
T Consensus 569 --------~~p~-----~~~----~~~-------------e~G-~p~~~~~~~~l~~~SP~-~~v~~~~~P~lLi~~g~~ 616 (686)
T PRK10115 569 --------SIPL-----TTG----EFE-------------EWG-NPQDPQYYEYMKSYSPY-DNVTAQAYPHLLVTTGLH 616 (686)
T ss_pred --------CCCC-----Chh----HHH-------------HhC-CCCCHHHHHHHHHcCch-hccCccCCCceeEEecCC
Confidence 0000 000 000 000 01111112222222122 355677889 56779999
Q ss_pred CCcCCHHHHHHHHHHhcC--CCceEEEc---CCCCccc
Q 018984 286 DTVTDPSVSKALYEKASS--KDKKCILY---KDAFHSL 318 (348)
Q Consensus 286 D~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~gH~~ 318 (348)
|..||+..+.++..++.. ...+++++ +++||..
T Consensus 617 D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 617 DSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred CCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Confidence 999999999999988863 34567777 8999983
No 89
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.77 E-value=1.7e-16 Score=123.43 Aligned_cols=258 Identities=17% Similarity=0.229 Sum_probs=149.9
Q ss_pred EEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhH-----HHHHHhCCceEEeecCCCCccCCC--CCC-CC
Q 018984 61 YEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGT-----ARKLASSGYGVFAMDYPGFGLSAG--LHG-YI 132 (348)
Q Consensus 61 ~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~-----~~~l~~~g~~vi~~D~~G~G~s~~--~~~-~~ 132 (348)
.+.+.-| .+++.+++..++ .+|+||-.|-.|.+...+|..+ ++.+. +.|.++-+|.||+..-.. +.+ ..
T Consensus 3 ~v~t~~G-~v~V~v~G~~~~-~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 3 DVETPYG-SVHVTVQGDPKG-NKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEETTE-EEEEEEESS--T-TS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT---
T ss_pred eeccCce-EEEEEEEecCCC-CCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccc
Confidence 3444445 688888865543 4899999999998766544443 34453 459999999999976443 233 23
Q ss_pred CChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHH
Q 018984 133 PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGI 212 (348)
Q Consensus 133 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 212 (348)
.+++++++++.+++++++.+ .++-+|--.||+|..++|..+|++|.|+||+++...... +.......+
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g------w~Ew~~~K~ 147 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG------WMEWFYQKL 147 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---------HHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc------HHHHHHHHH
Confidence 58999999999999999988 899999999999999999999999999999998764221 111111111
Q ss_pred Hh-hcCCCcccCCC---chhHHHHhchhh---hhhhhc---ccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEe
Q 018984 213 AN-ILPKHKLVPQK---DLAEAAFRDLKN---RELTKY---NVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILH 282 (348)
Q Consensus 213 ~~-~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 282 (348)
.. .+... ..... .+....+..... .+.... ......++..+...+..+....++....+...||+|++.
T Consensus 148 ~~~~L~~~-gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvv 226 (283)
T PF03096_consen 148 SSWLLYSY-GMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVV 226 (283)
T ss_dssp H--------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEE
T ss_pred hccccccc-ccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEE
Confidence 11 11111 11111 011111111110 011110 111112234555666666677777777888899999999
Q ss_pred cCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 283 GENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 283 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
|+..+.. +.+..+..++.....++..++++|=.+..|+|.. +.+.+.=|++.
T Consensus 227 G~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~k----laea~~lFlQG 278 (283)
T PF03096_consen 227 GDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGK----LAEAFKLFLQG 278 (283)
T ss_dssp ETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHH----HHHHHHHHHHH
T ss_pred ecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHH----HHHHHHHHHcc
Confidence 9999864 5667788888767789999999999999999998 88888888764
No 90
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.76 E-value=2.8e-17 Score=132.99 Aligned_cols=129 Identities=19% Similarity=0.227 Sum_probs=98.8
Q ss_pred CCceeEEEEecc--CCCCCceeEEEEecCCCcccccch---------hHHHHHHhCCceEEeecCCCCccCCCCCCCCCC
Q 018984 66 RGVEIFCKSWLP--ETSQPKGLVCYCHGYGDTCTFFFE---------GTARKLASSGYGVFAMDYPGFGLSAGLHGYIPS 134 (348)
Q Consensus 66 ~g~~l~~~~~~p--~~~~~~~~vv~~HG~~~~~~~~~~---------~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~ 134 (348)
||++|.+.+|.| ..+.+.|+||..|+++........ .....|+++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 799999999999 777779999999999854311011 1112388999999999999999999876542
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccc
Q 018984 135 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIAD 197 (348)
Q Consensus 135 ~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 197 (348)
.....+|..++|+++..+.. .+.+|.++|.|++|..++.+|...|..+++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPW-SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTT-EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCCC-CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 66779999999999999854 444899999999999999999988888999999988777655
No 91
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.76 E-value=2.5e-16 Score=120.56 Aligned_cols=267 Identities=15% Similarity=0.145 Sum_probs=169.6
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchh-----HHHHHHhCCceEEeecCCCCccCCC--CC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEG-----TARKLASSGYGVFAMDYPGFGLSAG--LH 129 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~-----~~~~l~~~g~~vi~~D~~G~G~s~~--~~ 129 (348)
.++..+.+..| .++..+++..++ ++|+||-.|..|.+....|.. -+..+..+ |.++-+|.||+-.-.. +.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~-~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~ 98 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKG-NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPE 98 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCC-CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCC
Confidence 45566666665 688888876655 578899999999876653433 24455566 9999999999965432 33
Q ss_pred C-CCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHH
Q 018984 130 G-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQI 208 (348)
Q Consensus 130 ~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 208 (348)
+ ...+++++++++..+++++..+ .++-+|--.|++|..++|..+|++|-|+||+++...... +..|...++
T Consensus 99 ~y~yPsmd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g--wiew~~~K~ 170 (326)
T KOG2931|consen 99 GYPYPSMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG--WIEWAYNKV 170 (326)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch--HHHHHHHHH
Confidence 3 2358999999999999999887 799999999999999999999999999999997654211 112222222
Q ss_pred HHHHHhhcCCCcccCCCchhHHHHhchhh--hhhhhc---ccccccCCcchHHHHHHHHhhHHHHHhcc----CCCCcEE
Q 018984 209 LIGIANILPKHKLVPQKDLAEAAFRDLKN--RELTKY---NVIVYKDKPRLRTALELLKTTEGIERRLE----KVSLPLL 279 (348)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~P~l 279 (348)
...+..............+...+-.+... .+.... ......+..++...+..+....|+..... .++||+|
T Consensus 171 ~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vl 250 (326)
T KOG2931|consen 171 SSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVL 250 (326)
T ss_pred HHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEE
Confidence 21111111110000000000000000000 000000 01111222344445555555444443333 4569999
Q ss_pred EEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 280 ILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 280 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
++.|++.+.+. ....+..++...+..+..+.++|=.+..++|.. +.+.+.=|++.
T Consensus 251 lvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~k----l~ea~~~FlqG 305 (326)
T KOG2931|consen 251 LVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGK----LAEAFKYFLQG 305 (326)
T ss_pred EEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchH----HHHHHHHHHcc
Confidence 99999998763 455566667556788999999999999999998 88888888764
No 92
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.75 E-value=1.1e-16 Score=121.08 Aligned_cols=245 Identities=19% Similarity=0.165 Sum_probs=165.1
Q ss_pred CCccceeeEEecCCCceeEEEEeccCCC-CCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCC----
Q 018984 53 DGLKTEESYEVNSRGVEIFCKSWLPETS-QPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAG---- 127 (348)
Q Consensus 53 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~---- 127 (348)
+.++.-+..++..+|.+|..++..|... ...|.||-.||+++.... |..+. .++..||.|+.+|.||.|.|..
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~-~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~ 129 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGE-WHDML-HWAVAGYAVFVMDVRGQGSSSQDTAD 129 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCC-ccccc-cccccceeEEEEecccCCCccccCCC
Confidence 3455667788999999999999999876 568999999999988764 54443 3556899999999999998732
Q ss_pred CCCC----------------CCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCc
Q 018984 128 LHGY----------------IPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 191 (348)
Q Consensus 128 ~~~~----------------~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~ 191 (348)
++.. .+-+.....|+..+++.+..-..++..+|.+.|.|.||.+++.+++..| ++++++..-|
T Consensus 130 ~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~P 208 (321)
T COG3458 130 PPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYP 208 (321)
T ss_pred CCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccc
Confidence 1111 1123445678888888888777788889999999999999999988877 6999999888
Q ss_pred cccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhc
Q 018984 192 MCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRL 271 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (348)
...-.......... ....-...+++..... ....-....+.+.....
T Consensus 209 fl~df~r~i~~~~~-----------------~~ydei~~y~k~h~~~----------------e~~v~~TL~yfD~~n~A 255 (321)
T COG3458 209 FLSDFPRAIELATE-----------------GPYDEIQTYFKRHDPK----------------EAEVFETLSYFDIVNLA 255 (321)
T ss_pred ccccchhheeeccc-----------------CcHHHHHHHHHhcCch----------------HHHHHHHHhhhhhhhHH
Confidence 76432211100000 0000000011110000 00000111223555667
Q ss_pred cCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 272 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 272 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
.++++|+|+..|-.|++||+...-..++.+. ..+++.+++.-+|.-.... ..+++..|+...
T Consensus 256 ~RiK~pvL~svgL~D~vcpPstqFA~yN~l~-~~K~i~iy~~~aHe~~p~~-------~~~~~~~~l~~l 317 (321)
T COG3458 256 ARIKVPVLMSVGLMDPVCPPSTQFAAYNALT-TSKTIEIYPYFAHEGGPGF-------QSRQQVHFLKIL 317 (321)
T ss_pred HhhccceEEeecccCCCCCChhhHHHhhccc-CCceEEEeeccccccCcch-------hHHHHHHHHHhh
Confidence 7899999999999999999999999999985 3467788887778654322 344567777654
No 93
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.75 E-value=2.3e-16 Score=134.43 Aligned_cols=240 Identities=12% Similarity=0.103 Sum_probs=142.3
Q ss_pred eEEEEeccCCC-CCceeEEEEecCCCccccc----chhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHH
Q 018984 70 IFCKSWLPETS-QPKGLVCYCHGYGDTCTFF----FEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIE 144 (348)
Q Consensus 70 l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~----~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~ 144 (348)
+..+.|.|... .-+.+||+++++-...-.+ -++++++|.++||.|+.+|+++-+..+.. .+++++++.+.+
T Consensus 201 ~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~----~~ldDYv~~i~~ 276 (560)
T TIGR01839 201 LELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE----WGLSTYVDALKE 276 (560)
T ss_pred eEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC----CCHHHHHHHHHH
Confidence 44455666543 2367899999986332221 26799999999999999999987655422 488999999999
Q ss_pred HHHHHHcCCCCCCCCeEEEEeChhHHHHHH----HHHhCCC-CcceEEEeCccccccccCCChHHH-HHHHHHHHhhcCC
Q 018984 145 HYSNIKEYPEFRTLPSFLFGQSLGGAVALK----VHLKQPN-AWSGAILVAPMCKIADDMVPPFLV-KQILIGIANILPK 218 (348)
Q Consensus 145 ~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~----~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 218 (348)
+++.+... .+..++.++|||+||.+++. +++++++ +|++++++.+..++........+. ......+......
T Consensus 277 Ald~V~~~--tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~ 354 (560)
T TIGR01839 277 AVDAVRAI--TGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQ 354 (560)
T ss_pred HHHHHHHh--cCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHh
Confidence 99998765 23448999999999999986 7788885 799999999988865422111110 1111111111111
Q ss_pred CcccCCCchhH------------HHH-hch-hhhhhhhcccccccCCc------chHHHHHHHHhhHHH----------H
Q 018984 219 HKLVPQKDLAE------------AAF-RDL-KNRELTKYNVIVYKDKP------RLRTALELLKTTEGI----------E 268 (348)
Q Consensus 219 ~~~~~~~~~~~------------~~~-~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~----------~ 268 (348)
....+...+.. .++ ... ........+...|..+. ....++.++....-. .
T Consensus 355 ~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~ 434 (560)
T TIGR01839 355 AGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTP 434 (560)
T ss_pred cCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEE
Confidence 11111111000 000 000 00000011111111111 011122222111000 1
Q ss_pred HhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcc
Q 018984 269 RRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHS 317 (348)
Q Consensus 269 ~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 317 (348)
-.+.+|+||++++.|+.|.++|++.+..+.+.+.+ +++++..+ +||.
T Consensus 435 idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHI 481 (560)
T TIGR01839 435 IDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHI 481 (560)
T ss_pred echhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCcc
Confidence 24678999999999999999999999999998865 57777766 5785
No 94
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.74 E-value=1.9e-17 Score=121.98 Aligned_cols=265 Identities=12% Similarity=0.129 Sum_probs=149.6
Q ss_pred eEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCC--CCCCChhH
Q 018984 60 SYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLH--GYIPSFDR 137 (348)
Q Consensus 60 ~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~--~~~~~~~~ 137 (348)
..+...||..+....|..++. .+-.+++-|..+-...+|++++..++++||.|+.+|+||.|+|.... .....+.+
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~--~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGK--ASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccccCCCccCccccccCCCC--CCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhh
Confidence 446678999999988854432 22234444555555557999999999999999999999999998653 22345666
Q ss_pred HH-HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhc
Q 018984 138 LV-DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANIL 216 (348)
Q Consensus 138 ~~-~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (348)
++ .|+...+++++.. .++.+...+|||+||.+.-.+. +++ ++.+....+...... .+..............-..
T Consensus 86 wA~~D~~aal~~~~~~--~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagws-g~m~~~~~l~~~~l~~lv~ 160 (281)
T COG4757 86 WARLDFPAALAALKKA--LPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWS-GWMGLRERLGAVLLWNLVG 160 (281)
T ss_pred hhhcchHHHHHHHHhh--CCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccc-cchhhhhcccceeeccccc
Confidence 54 5888899988874 3566899999999999865444 344 344444443322211 1111000000000000000
Q ss_pred CCCcccCCCchhHHHHhchhhhh-hhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHH
Q 018984 217 PKHKLVPQKDLAEAAFRDLKNRE-LTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSK 295 (348)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 295 (348)
+..... ...+...+........ ....+...+.+.+++... -.....+.+..+.+++|++.+...+|+.+|+...+
T Consensus 161 p~lt~w-~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fd---dp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d 236 (281)
T COG4757 161 PPLTFW-KGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFD---DPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRD 236 (281)
T ss_pred cchhhc-cccCcHhhcCCCccCcchHHHHHHHHhcCcccccc---ChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHH
Confidence 000000 0011111111000000 000000000001100000 00111344667789999999999999999999999
Q ss_pred HHHHHhcCCCceEEEcCC----CCcccccCCChhHHHHHHHHHHHHH
Q 018984 296 ALYEKASSKDKKCILYKD----AFHSLLEGEPDDMIIRVFADIISWL 338 (348)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~----~gH~~~~~~~~~~~~~~~~~i~~fl 338 (348)
.+.....+...+...++. -||+-..-++-| .+++++++|+
T Consensus 237 ~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~E---alwk~~L~w~ 280 (281)
T COG4757 237 AFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFE---ALWKEMLGWF 280 (281)
T ss_pred HHHHhhhcCcccceecCcccCcccchhhhccchH---HHHHHHHHhh
Confidence 999888655566666654 489877766632 3888888886
No 95
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.73 E-value=5.1e-16 Score=115.65 Aligned_cols=233 Identities=15% Similarity=0.142 Sum_probs=129.7
Q ss_pred eeEEecCCCceeEEEEeccCCCCC--ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCC-ccCCCCCCCCCCh
Q 018984 59 ESYEVNSRGVEIFCKSWLPETSQP--KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGF-GLSAGLHGYIPSF 135 (348)
Q Consensus 59 ~~~~~~~~g~~l~~~~~~p~~~~~--~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~-G~s~~~~~~~~~~ 135 (348)
.+.+.-.+|.+|+.+.-.|.+..+ .++||+..|++..... +..++.+|+..||+|+.+|...| |.|++.... +++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh-~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDH-FAGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGG-GHHHHHHHHTTT--EEEE---B--------------H
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHH-HHHHHHHHhhCCeEEEeccccccccCCCCChhh-cch
Confidence 456667789999999988876544 6899999999988887 89999999999999999998877 888877555 489
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhh
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANI 215 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (348)
.....++..+++|+... +..++.|+.-|+.|-+|+..|.+- .+.-+|...+....... + .+.
T Consensus 82 s~g~~sL~~V~dwl~~~---g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~T----------L---e~a 143 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATR---GIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDT----------L---EKA 143 (294)
T ss_dssp HHHHHHHHHHHHHHHHT---T---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHH----------H---HHH
T ss_pred HHhHHHHHHHHHHHHhc---CCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHH----------H---HHH
Confidence 89999999999999854 444799999999999999999854 47888887776643221 1 111
Q ss_pred cCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHH----hhHHHHHhccCCCCcEEEEecCCCCcCCH
Q 018984 216 LPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLK----TTEGIERRLEKVSLPLLILHGENDTVTDP 291 (348)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 291 (348)
+... +............+.... .-..-......+. ........++.+++|++.+++++|.+|..
T Consensus 144 l~~D-----------yl~~~i~~lp~dldfeGh-~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q 211 (294)
T PF02273_consen 144 LGYD-----------YLQLPIEQLPEDLDFEGH-NLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQ 211 (294)
T ss_dssp HSS------------GGGS-GGG--SEEEETTE-EEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-H
T ss_pred hccc-----------hhhcchhhCCCccccccc-ccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccH
Confidence 1000 000000000000000000 0000001111111 12234567888999999999999999999
Q ss_pred HHHHHHHHHhcCCCceEEEcCCCCcccccCCCh
Q 018984 292 SVSKALYEKASSKDKKCILYKDAFHSLLEGEPD 324 (348)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 324 (348)
....++...+.+..+++..++|+.|.+.. ++.
T Consensus 212 ~eV~~~~~~~~s~~~klysl~Gs~HdL~e-nl~ 243 (294)
T PF02273_consen 212 SEVEELLDNINSNKCKLYSLPGSSHDLGE-NLV 243 (294)
T ss_dssp HHHHHHHTT-TT--EEEEEETT-SS-TTS-SHH
T ss_pred HHHHHHHHhcCCCceeEEEecCccchhhh-ChH
Confidence 99999998887788899999999998763 443
No 96
>COG0400 Predicted esterase [General function prediction only]
Probab=99.73 E-value=2.3e-16 Score=119.10 Aligned_cols=182 Identities=20% Similarity=0.241 Sum_probs=125.1
Q ss_pred CCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCC--cc----CCCCCCC--CCChhHHHHHHHHHHHHHHc
Q 018984 80 SQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGF--GL----SAGLHGY--IPSFDRLVDDVIEHYSNIKE 151 (348)
Q Consensus 80 ~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~--G~----s~~~~~~--~~~~~~~~~d~~~~l~~l~~ 151 (348)
....|+||++||+|++... +.++...+..+ +.++.+.-+-- |. +...... ..++..-...+.++++.+..
T Consensus 15 ~p~~~~iilLHG~Ggde~~-~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 15 DPAAPLLILLHGLGGDELD-LVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCcEEEEEecCCCChhh-hhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 3447799999999988766 44454444333 56655532211 10 0000000 11233335556667777777
Q ss_pred CCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHH
Q 018984 152 YPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAA 231 (348)
Q Consensus 152 ~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (348)
+.+.+..+++++|+|.||++++.+..++|+.++++|++++.......
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------------
Confidence 77777779999999999999999999999999999999987643321
Q ss_pred HhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcC--CCceEE
Q 018984 232 FRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCI 309 (348)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~ 309 (348)
..-..-..|+++++|+.|++||...+.++.+.+.. .+++..
T Consensus 140 -------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~ 182 (207)
T COG0400 140 -------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVR 182 (207)
T ss_pred -------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEE
Confidence 01112357999999999999999998888887763 557778
Q ss_pred EcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 310 LYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 310 ~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
.++ .||.+..+ ..+.+.+|+.+..
T Consensus 183 ~~~-~GH~i~~e--------~~~~~~~wl~~~~ 206 (207)
T COG0400 183 WHE-GGHEIPPE--------ELEAARSWLANTL 206 (207)
T ss_pred Eec-CCCcCCHH--------HHHHHHHHHHhcc
Confidence 888 79987643 5677888887653
No 97
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.72 E-value=1.9e-15 Score=125.32 Aligned_cols=272 Identities=12% Similarity=0.093 Sum_probs=158.1
Q ss_pred ceeeEEecCCCceeEEEEeccCCCC---CceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQ---PKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIP 133 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~---~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~ 133 (348)
..+..+...+-.+|. .|.|...+ ..|+||++..+.+......+.+.+.|.. |+.|+..|+..-+..+...+. .
T Consensus 75 v~e~vV~~~~~~~L~--~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~-f 150 (406)
T TIGR01849 75 IRERVVWDKPFCRLI--HFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK-F 150 (406)
T ss_pred eEEEEEEECCCeEEE--EECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-C
Confidence 445555555544443 33443222 1378999999887766556788899988 999999999877755322233 4
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhC-----CCCcceEEEeCccccccccCCChHHHH--
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ-----PNAWSGAILVAPMCKIADDMVPPFLVK-- 206 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~-- 206 (348)
+++++++-+.+++++++. +++++|+|+||..++.+++.. |.+++++++++++.+............
T Consensus 151 ~ldDYi~~l~~~i~~~G~-------~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~ 223 (406)
T TIGR01849 151 DLEDYIDYLIEFIRFLGP-------DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELARE 223 (406)
T ss_pred CHHHHHHHHHHHHHHhCC-------CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhc
Confidence 899999888888887733 589999999999977666543 667999999999888764311111110
Q ss_pred HHHHHHHhhc----CCC----c--ccCCCchhHHHHh--chhh--hhhhhcccccc-cCCcc------------------
Q 018984 207 QILIGIANIL----PKH----K--LVPQKDLAEAAFR--DLKN--RELTKYNVIVY-KDKPR------------------ 253 (348)
Q Consensus 207 ~~~~~~~~~~----~~~----~--~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~-~~~~~------------------ 253 (348)
.....+.... +.. . ..+. .+....+. +... ........... .....
T Consensus 224 ~~i~~~~~~~i~~vp~~~~g~gr~v~PG-~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlp 302 (406)
T TIGR01849 224 KPIEWFQHNVIMRVPFPYPGAGRLVYPG-FLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMT 302 (406)
T ss_pred ccHHHHHHHhhhccCccccCCCCcccCH-HHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCc
Confidence 0011111111 110 0 1111 11111110 0000 00000000000 00000
Q ss_pred hHHHHHHHHhhH---HH----------HHhccCCC-CcEEEEecCCCCcCCHHHHHHHHHHh---cCCCceEEEcCCCCc
Q 018984 254 LRTALELLKTTE---GI----------ERRLEKVS-LPLLILHGENDTVTDPSVSKALYEKA---SSKDKKCILYKDAFH 316 (348)
Q Consensus 254 ~~~~~~~~~~~~---~~----------~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH 316 (348)
.....+.+.... .+ .-++++|+ +|+|.+.|++|.++|+.....+.+.+ ++.+.+..+.+++||
T Consensus 303 ge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH 382 (406)
T TIGR01849 303 AEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGH 382 (406)
T ss_pred HHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCe
Confidence 011111111100 00 01357788 99999999999999999999888874 445666788888999
Q ss_pred ccccCCChhHHHHHHHHHHHHHhhh
Q 018984 317 SLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 317 ~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
.-...- ....++++..|.+||.++
T Consensus 383 ~Gvf~G-~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 383 YGVFSG-SRFREEIYPLVREFIRRN 406 (406)
T ss_pred EEEeeC-hhhhhhhchHHHHHHHhC
Confidence 866532 233556999999999864
No 98
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.72 E-value=2.7e-17 Score=104.32 Aligned_cols=79 Identities=41% Similarity=0.730 Sum_probs=72.2
Q ss_pred CceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHH
Q 018984 67 GVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHY 146 (348)
Q Consensus 67 g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l 146 (348)
|.+|+++.|.|++. ++.+|+++||++.+... |..+++.|+++||.|+++|+||||.|.+......+++++++|+..++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~r-y~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGR-YAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHH-HHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 67899999999876 78999999999998886 89999999999999999999999999988777789999999999886
Q ss_pred H
Q 018984 147 S 147 (348)
Q Consensus 147 ~ 147 (348)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 4
No 99
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.72 E-value=3.4e-16 Score=115.69 Aligned_cols=156 Identities=24% Similarity=0.332 Sum_probs=101.8
Q ss_pred EEEEecCCCccc-ccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEE
Q 018984 86 VCYCHGYGDTCT-FFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFG 164 (348)
Q Consensus 86 vv~~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~G 164 (348)
|+++||++++.. .|+..+.+.|... ++|-.+++ +. .+.++++..+.+.+..+.. +++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~~-----P~~~~W~~~l~~~i~~~~~-------~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------DN-----PDLDEWVQALDQAIDAIDE-------PTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------TS-------HHHHHHHHHHCCHC-TT-------TEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------CC-----CCHHHHHHHHHHHHhhcCC-------CeEEEE
Confidence 689999988764 4455566666555 77777666 11 3778888877777775422 699999
Q ss_pred eChhHHHHHHHH-HhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhc
Q 018984 165 QSLGGAVALKVH-LKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKY 243 (348)
Q Consensus 165 hS~Gg~~a~~~a-~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (348)
||+|+..++.++ .....+|++++|++|+.........+. ..
T Consensus 62 HSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~------------------------------------~~-- 103 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPE------------------------------------LD-- 103 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCG------------------------------------GC--
T ss_pred eCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhh------------------------------------cc--
Confidence 999999999999 777889999999999753100000000 00
Q ss_pred ccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCC
Q 018984 244 NVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 322 (348)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 322 (348)
.+. . .....+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+...+.
T Consensus 104 ---~f~----------------~--~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 104 ---GFT----------------P--LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNAASG 158 (171)
T ss_dssp ---CCT----------------T--SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSGGGT
T ss_pred ---ccc----------------c--CcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCcccccC
Confidence 000 0 011234567799999999999999999999998 789999999999876543
No 100
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.67 E-value=9.3e-16 Score=128.53 Aligned_cols=113 Identities=15% Similarity=0.043 Sum_probs=86.2
Q ss_pred CceeEEEEecCCCcc--cccchhHHHHHHh--CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCC
Q 018984 82 PKGLVCYCHGYGDTC--TFFFEGTARKLAS--SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRT 157 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~--~~~~~~~~~~l~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~ 157 (348)
.+|++|++||++++. ..|...+.+.|.. ..++|+++|++|+|.+..+... .......+++.++++++....+++-
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 368899999998654 2222235555542 2599999999999988655333 2446677888899998865433445
Q ss_pred CCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccc
Q 018984 158 LPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 195 (348)
Q Consensus 158 ~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 195 (348)
.+++|+||||||.+|..++...|++|.++++++|....
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 58999999999999999999999999999999997653
No 101
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.67 E-value=4.1e-16 Score=125.38 Aligned_cols=125 Identities=11% Similarity=0.106 Sum_probs=90.6
Q ss_pred CCceeEEEEeccCCCCCceeEEEEecCCCcc-cccchhHHHHHHh-CCceEEeecCCCCccCCCCCCCCCChhHHHHHHH
Q 018984 66 RGVEIFCKSWLPETSQPKGLVCYCHGYGDTC-TFFFEGTARKLAS-SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVI 143 (348)
Q Consensus 66 ~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~ 143 (348)
++..+.+..+ +..+|++|++||++++. ..|...+...+.. .+++|+++|+++++.+..+. ...+.....+++.
T Consensus 23 ~~~~~~~~~f----~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~-a~~~~~~v~~~la 97 (275)
T cd00707 23 DPSSLKNSNF----NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ-AVNNTRVVGAELA 97 (275)
T ss_pred ChhhhhhcCC----CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH-HHHhHHHHHHHHH
Confidence 4455655554 23368899999999887 4444455554544 57999999999984332211 1124556677888
Q ss_pred HHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccc
Q 018984 144 EHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 195 (348)
Q Consensus 144 ~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 195 (348)
.+++.+....+.+..+++++||||||.+|..++.++|++|+++++++|....
T Consensus 98 ~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 98 KFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 8888886653344458999999999999999999999999999999987653
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.66 E-value=3.1e-14 Score=113.71 Aligned_cols=114 Identities=18% Similarity=0.296 Sum_probs=94.9
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhC---CceEEeecCCCCccCCCC-----CCCCCChhHHHHHHHHHHHHHHcCCC
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASS---GYGVFAMDYPGFGLSAGL-----HGYIPSFDRLVDDVIEHYSNIKEYPE 154 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~---g~~vi~~D~~G~G~s~~~-----~~~~~~~~~~~~d~~~~l~~l~~~~~ 154 (348)
+..|+|++|.+|-.+. |..+.+.|.+. .+.|+++.+.||-.++.. ....++++++++-..++++.+.....
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 5689999999999885 88888888743 799999999999877654 34557999999999999998887532
Q ss_pred CCCCCeEEEEeChhHHHHHHHHHhCC---CCcceEEEeCccccccc
Q 018984 155 FRTLPSFLFGQSLGGAVALKVHLKQP---NAWSGAILVAPMCKIAD 197 (348)
Q Consensus 155 ~~~~~v~l~GhS~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~ 197 (348)
.++.+++|+|||.|++++++++.+.+ .+|.+++++-|...-..
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccccc
Confidence 24568999999999999999999999 78999999998876443
No 103
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.66 E-value=1.8e-14 Score=111.40 Aligned_cols=204 Identities=18% Similarity=0.196 Sum_probs=134.5
Q ss_pred EEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHc
Q 018984 72 CKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKE 151 (348)
Q Consensus 72 ~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 151 (348)
..++.|.+....|+|||+||+..... +|..+.++++++||.|+.+|+...+.. .-...++++.++++|+..
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~ 76 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAK 76 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHh
Confidence 34566776667999999999995544 589999999999999999997653321 222235556666666544
Q ss_pred CC--------CCCCCCeEEEEeChhHHHHHHHHHhC-----CCCcceEEEeCccccccccCC-ChHHHHHHHHHHHhhcC
Q 018984 152 YP--------EFRTLPSFLFGQSLGGAVALKVHLKQ-----PNAWSGAILVAPMCKIADDMV-PPFLVKQILIGIANILP 217 (348)
Q Consensus 152 ~~--------~~~~~~v~l~GhS~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 217 (348)
.. ..+-.++.|.|||.||-+|..++..+ +.+++++|+++|+........ .+..
T Consensus 77 ~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v------------- 143 (259)
T PF12740_consen 77 GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPV------------- 143 (259)
T ss_pred cchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCcc-------------
Confidence 21 12344899999999999999999887 558999999999863221100 0000
Q ss_pred CCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCC---------c
Q 018984 218 KHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDT---------V 288 (348)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~---------~ 288 (348)
. .....--+.++|+++|...-+. .
T Consensus 144 ----------------------------~-------------------~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~C 176 (259)
T PF12740_consen 144 ----------------------------L-------------------TYTPQSFDFSMPALVIGTGLGGEPRNPLFPPC 176 (259)
T ss_pred ----------------------------c-------------------cCcccccCCCCCeEEEecccCcccccccCCCC
Confidence 0 0001112356899999877764 2
Q ss_pred CCHH-HHHHHHHHhcCCCceEEEcCCCCcccccCCC---------------------hhHHHHHHHHHHHHHhhhcCCC
Q 018984 289 TDPS-VSKALYEKASSKDKKCILYKDAFHSLLEGEP---------------------DDMIIRVFADIISWLDDHSRSS 345 (348)
Q Consensus 289 ~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---------------------~~~~~~~~~~i~~fl~~~~~~~ 345 (348)
.|.. .-+++++..+.+ .-..+.++.||+-+++.. +.+.+.+...+..|++..+..+
T Consensus 177 aP~g~n~~~Ff~~~~~p-~~~~v~~~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~~~r~f~~g~~vAfl~~~l~g~ 254 (259)
T PF12740_consen 177 APAGVNYREFFDECKPP-SWHFVAKDYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRDPMRRFVGGIMVAFLNAQLQGD 254 (259)
T ss_pred CCCCCCHHHHHHhcCCC-EEEEEeCCCCchHhhcCCCcchhHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3332 456677777544 445556889998777654 1345556667778888777654
No 104
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.65 E-value=1.3e-15 Score=122.73 Aligned_cols=148 Identities=21% Similarity=0.239 Sum_probs=98.1
Q ss_pred cccccccCCCccceeeEEecCCCceeEEEEeccCC-CCCceeEEEEecCCCcccc--------------c---chhHHHH
Q 018984 45 HILLKATCDGLKTEESYEVNSRGVEIFCKSWLPET-SQPKGLVCYCHGYGDTCTF--------------F---FEGTARK 106 (348)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~-~~~~~~vv~~HG~~~~~~~--------------~---~~~~~~~ 106 (348)
.++-....++...++..+.+.++..+...++.|++ ..+.|+||++||-++..+. + -..++..
T Consensus 76 ~~l~~eqrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~ 155 (390)
T PF12715_consen 76 EVLETEQRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQ 155 (390)
T ss_dssp EEEEEEEETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHH
T ss_pred eEEEEEecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHH
Confidence 34444556777888888999999999999999997 5678999999997655421 0 1235788
Q ss_pred HHhCCceEEeecCCCCccCCCCCCCC----CChhH---------------HHHHHHHHHHHHHcCCCCCCCCeEEEEeCh
Q 018984 107 LASSGYGVFAMDYPGFGLSAGLHGYI----PSFDR---------------LVDDVIEHYSNIKEYPEFRTLPSFLFGQSL 167 (348)
Q Consensus 107 l~~~g~~vi~~D~~G~G~s~~~~~~~----~~~~~---------------~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~ 167 (348)
|+++||.|+++|.+|+|+........ ++.+. .+-|...+++++.....++.++|.++|+||
T Consensus 156 LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSm 235 (390)
T PF12715_consen 156 LAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSM 235 (390)
T ss_dssp HHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGG
T ss_pred HHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecc
Confidence 99999999999999999876543211 11111 123556688999988888888999999999
Q ss_pred hHHHHHHHHHhCCCCcceEEEeCccc
Q 018984 168 GGAVALKVHLKQPNAWSGAILVAPMC 193 (348)
Q Consensus 168 Gg~~a~~~a~~~p~~v~~~vl~~~~~ 193 (348)
||..++.+++..+ +|++.|..+-..
T Consensus 236 Gg~~a~~LaALDd-RIka~v~~~~l~ 260 (390)
T PF12715_consen 236 GGYRAWWLAALDD-RIKATVANGYLC 260 (390)
T ss_dssp GHHHHHHHHHH-T-T--EEEEES-B-
T ss_pred cHHHHHHHHHcch-hhHhHhhhhhhh
Confidence 9999999999876 688888776543
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.65 E-value=6.6e-14 Score=97.23 Aligned_cols=188 Identities=18% Similarity=0.196 Sum_probs=128.1
Q ss_pred CCCceeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecCCCCccC-----CCCCCCCCChhHHHHHHHHHHHHHHcCC
Q 018984 80 SQPKGLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDYPGFGLS-----AGLHGYIPSFDRLVDDVIEHYSNIKEYP 153 (348)
Q Consensus 80 ~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s-----~~~~~~~~~~~~~~~d~~~~l~~l~~~~ 153 (348)
+....+||+-||.|.+.++ +...++..|+.+|+.|..++++..-.. .+++....-...+...+.++...+...
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~g- 89 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEG- 89 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCC-
Confidence 3345689999999877653 356788899999999999998764322 122222123344555555555544333
Q ss_pred CCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHh
Q 018984 154 EFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFR 233 (348)
Q Consensus 154 ~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (348)
+.++-|+||||.++..++..-...|+++++++-++....... .
T Consensus 90 -----pLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe--~------------------------------ 132 (213)
T COG3571 90 -----PLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE--Q------------------------------ 132 (213)
T ss_pred -----ceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc--c------------------------------
Confidence 899999999999999998876666999999985543322100 0
Q ss_pred chhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCC
Q 018984 234 DLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD 313 (348)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (348)
.-.+.+..+++|++|.+|+.|++-..+..... .-++..+++++++
T Consensus 133 --------------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y---~ls~~iev~wl~~ 177 (213)
T COG3571 133 --------------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAGY---ALSDPIEVVWLED 177 (213)
T ss_pred --------------------------------chhhhccCCCCCeEEeecccccccCHHHHHhh---hcCCceEEEEecc
Confidence 11246788999999999999999877665322 2246799999999
Q ss_pred CCcccccCC------ChhHHHHHHHHHHHHHhh
Q 018984 314 AFHSLLEGE------PDDMIIRVFADIISWLDD 340 (348)
Q Consensus 314 ~gH~~~~~~------~~~~~~~~~~~i~~fl~~ 340 (348)
+.|.+--.+ -+.-.....++|..|...
T Consensus 178 adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 178 ADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred CccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999864322 123355577788888764
No 106
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.64 E-value=8.6e-15 Score=107.88 Aligned_cols=185 Identities=18% Similarity=0.203 Sum_probs=132.9
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCC-CCccCCC-CCC------CCCChhHHHHHHHHHHHHHHcCCCC
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYP-GFGLSAG-LHG------YIPSFDRLVDDVIEHYSNIKEYPEF 155 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~-G~G~s~~-~~~------~~~~~~~~~~d~~~~l~~l~~~~~~ 155 (348)
..||++--..+....--+..+..++..||.|++||+. |-..+.. ... ...+.+....++..++++++.+ .
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~--g 117 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH--G 117 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc--C
Confidence 4566665554433222567888898899999999965 3122211 000 0123445567899999999865 3
Q ss_pred CCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhch
Q 018984 156 RTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL 235 (348)
Q Consensus 156 ~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (348)
+..+|.++|.||||-++..+....| .+.+++..-|...
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~----------------------------------------- 155 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV----------------------------------------- 155 (242)
T ss_pred CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC-----------------------------------------
Confidence 4558999999999999999988888 5788777766431
Q ss_pred hhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcC-C--CceEEEcC
Q 018984 236 KNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS-K--DKKCILYK 312 (348)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 312 (348)
+ .....++++|++++.|+.|..+|+.....+.+.+.. + ..++.+++
T Consensus 156 ------------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~ 204 (242)
T KOG3043|consen 156 ------------------------------D-SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFS 204 (242)
T ss_pred ------------------------------C-hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcC
Confidence 1 135568899999999999999999988888888753 2 23689999
Q ss_pred CCCccccc-----CCCh--hHHHHHHHHHHHHHhhhcC
Q 018984 313 DAFHSLLE-----GEPD--DMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 313 ~~gH~~~~-----~~~~--~~~~~~~~~i~~fl~~~~~ 343 (348)
+.+|.++. +.|+ ..++...+.+.+|++.+++
T Consensus 205 g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 205 GVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYLA 242 (242)
T ss_pred CccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhhC
Confidence 99998763 3343 3467789999999998763
No 107
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.62 E-value=5.6e-14 Score=127.55 Aligned_cols=229 Identities=14% Similarity=0.100 Sum_probs=132.1
Q ss_pred hHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcC--------------CCCCCCCeEEEEeCh
Q 018984 102 GTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEY--------------PEFRTLPSFLFGQSL 167 (348)
Q Consensus 102 ~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~--------------~~~~~~~v~l~GhS~ 167 (348)
.+.++|+.+||.|+.+|.||.|.|++.... .-.+..+|..++|+|+..+ ..+.+.+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 355788899999999999999999986432 2245688999999999842 122345999999999
Q ss_pred hHHHHHHHHHhCCCCcceEEEeCccccccccCCChH-------HHHHHHHHHHhhcCCCcccCCC-chhHHHHhchhhhh
Q 018984 168 GGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPF-------LVKQILIGIANILPKHKLVPQK-DLAEAAFRDLKNRE 239 (348)
Q Consensus 168 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 239 (348)
||.+++.+|...|+.++++|..++..+......... ........+............. ......+..... .
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~-~ 426 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLA-E 426 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHh-h
Confidence 999999999998889999999887654321110000 0000000000000000000000 000000000000 0
Q ss_pred hhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcC--CCceEEEcCCCCcc
Q 018984 240 LTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHS 317 (348)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~ 317 (348)
.... ...........+. ..++...+.++++|+|+++|..|..++.+...++++.+.. ...++.+.+ .+|.
T Consensus 427 ~~~~---~~~~~~~y~~fW~----~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~ 498 (767)
T PRK05371 427 LTAA---QDRKTGDYNDFWD----DRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHV 498 (767)
T ss_pred hhhh---hhhcCCCccHHHH----hCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCcc
Confidence 0000 0000000111111 1123356678999999999999999998888888888753 345665544 5786
Q ss_pred cccC-CChhHHHHHHHHHHHHHhhhcCCC
Q 018984 318 LLEG-EPDDMIIRVFADIISWLDDHSRSS 345 (348)
Q Consensus 318 ~~~~-~~~~~~~~~~~~i~~fl~~~~~~~ 345 (348)
.... .+.+ +.+.+.+|++.+++..
T Consensus 499 ~~~~~~~~d----~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 499 YPNNWQSID----FRDTMNAWFTHKLLGI 523 (767)
T ss_pred CCCchhHHH----HHHHHHHHHHhccccC
Confidence 4432 2233 7788899999888653
No 108
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.61 E-value=8e-14 Score=115.46 Aligned_cols=284 Identities=16% Similarity=0.173 Sum_probs=169.6
Q ss_pred CCCccceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccc-----hhHHHHHHhCCceEEeecCCCCccCC
Q 018984 52 CDGLKTEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFF-----EGTARKLASSGYGVFAMDYPGFGLSA 126 (348)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~s~ 126 (348)
..+...++..+++.||..+..... |..+.++|+|++.||+.+++..|. ..++-.|+++||.|+.-+.||...|.
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lhRI-p~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr 121 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLHRI-PRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSR 121 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEeee-cCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccch
Confidence 445668999999999996666554 333366899999999988877642 34667788999999999999977764
Q ss_pred CCC---------CCCCChhHH-HHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC---CcceEEEeCccc
Q 018984 127 GLH---------GYIPSFDRL-VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN---AWSGAILVAPMC 193 (348)
Q Consensus 127 ~~~---------~~~~~~~~~-~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~---~v~~~vl~~~~~ 193 (348)
+-. -...+++++ ..|+-+.|+++.... ...+++.+|||.|+.....++...|+ +|+..++++|..
T Consensus 122 ~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 122 KHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 321 112356664 568999999987763 34489999999999999999888775 799999999988
Q ss_pred cccccCCChHHHHHH----HHHHHhhcCCCcccCCCchhHHHHhchhh-----hh-------------hhhccc----cc
Q 018984 194 KIADDMVPPFLVKQI----LIGIANILPKHKLVPQKDLAEAAFRDLKN-----RE-------------LTKYNV----IV 247 (348)
Q Consensus 194 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-------------~~~~~~----~~ 247 (348)
............... ...+...+......+...+...+....-. .. ...... ..
T Consensus 200 ~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~ 279 (403)
T KOG2624|consen 200 FPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVY 279 (403)
T ss_pred hhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchh
Confidence 543211111100000 01223333333333332222111110000 00 000000 00
Q ss_pred ccCC---cchHHHH---HHHHh-------------------hHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhc
Q 018984 248 YKDK---PRLRTAL---ELLKT-------------------TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKAS 302 (348)
Q Consensus 248 ~~~~---~~~~~~~---~~~~~-------------------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 302 (348)
+... .+..... .+... .....-.+.++++|+.+.+|++|.++.++....+...+.
T Consensus 280 ~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~ 359 (403)
T KOG2624|consen 280 LAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLP 359 (403)
T ss_pred hccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcc
Confidence 0000 0111111 11110 001112456789999999999999999999998887774
Q ss_pred CCCceEEE-cCCCCccccc---CCChhHHHHHHHHHHHHHhhhc
Q 018984 303 SKDKKCIL-YKDAFHSLLE---GEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 303 ~~~~~~~~-~~~~gH~~~~---~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
+......+ +++-.|.-+. +-+++ +.+.|++.++...
T Consensus 360 ~~~~~~~~~~~~ynHlDFi~g~da~~~----vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 360 NSVIKYIVPIPEYNHLDFIWGLDAKEE----VYDPVIERLRLFE 399 (403)
T ss_pred cccccccccCCCccceeeeeccCcHHH----HHHHHHHHHHhhh
Confidence 33332222 7888996442 23444 7777777776543
No 109
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.60 E-value=7.5e-14 Score=104.26 Aligned_cols=182 Identities=20% Similarity=0.270 Sum_probs=107.2
Q ss_pred EEEEecCCCcccccc-hhHHHHHHhCC--ceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEE
Q 018984 86 VCYCHGYGDTCTFFF-EGTARKLASSG--YGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFL 162 (348)
Q Consensus 86 vv~~HG~~~~~~~~~-~~~~~~l~~~g--~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 162 (348)
|+++||+.++....- ..+.+.+.+.+ ..+.++|++ .......+.+.++++..... .++|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~------~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE------NVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC------CeEE
Confidence 899999998876522 23445565543 456777765 35666677777777766544 5999
Q ss_pred EEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhh
Q 018984 163 FGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTK 242 (348)
Q Consensus 163 ~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (348)
+|.||||..|..++.+++ +++ |+++|...+... +...+..........
T Consensus 64 iGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~-------------l~~~iG~~~~~~~~e---------------- 111 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG--LPA-VLINPAVRPYEL-------------LQDYIGEQTNPYTGE---------------- 111 (187)
T ss_pred EEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHH-------------HHHhhCccccCCCCc----------------
Confidence 999999999999999886 455 899998753221 111111100000000
Q ss_pred cccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCC
Q 018984 243 YNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 322 (348)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 322 (348)
.+ .+. ...+.....+......-..+++++.++.|++++.+.+.. .+ .++..++.+|++|.+..
T Consensus 112 ----~~----~~~--~~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~---~~--~~~~~~i~~ggdH~f~~-- 174 (187)
T PF05728_consen 112 ----SY----ELT--EEHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAVA---KY--RGCAQIIEEGGDHSFQD-- 174 (187)
T ss_pred ----cc----eec--hHhhhhcceEeccccCCCccEEEEEecCCcccCHHHHHH---Hh--cCceEEEEeCCCCCCcc--
Confidence 00 000 000000000000112335689999999999999865543 33 34455567888997753
Q ss_pred ChhHHHHHHHHHHHHH
Q 018984 323 PDDMIIRVFADIISWL 338 (348)
Q Consensus 323 ~~~~~~~~~~~i~~fl 338 (348)
-++ ....|.+|+
T Consensus 175 f~~----~l~~i~~f~ 186 (187)
T PF05728_consen 175 FEE----YLPQIIAFL 186 (187)
T ss_pred HHH----HHHHHHHhh
Confidence 233 777888886
No 110
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.60 E-value=2e-13 Score=108.14 Aligned_cols=102 Identities=23% Similarity=0.276 Sum_probs=80.1
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEE
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLF 163 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~ 163 (348)
++|+++||.+++... |..+++.|....+.|+.++.+|.+....+ ..++++++++..+.|...... .++.|+
T Consensus 1 ~~lf~~p~~gG~~~~-y~~la~~l~~~~~~v~~i~~~~~~~~~~~---~~si~~la~~y~~~I~~~~~~-----gp~~L~ 71 (229)
T PF00975_consen 1 RPLFCFPPAGGSASS-YRPLARALPDDVIGVYGIEYPGRGDDEPP---PDSIEELASRYAEAIRARQPE-----GPYVLA 71 (229)
T ss_dssp -EEEEESSTTCSGGG-GHHHHHHHTTTEEEEEEECSTTSCTTSHE---ESSHHHHHHHHHHHHHHHTSS-----SSEEEE
T ss_pred CeEEEEcCCccCHHH-HHHHHHhCCCCeEEEEEEecCCCCCCCCC---CCCHHHHHHHHHHHhhhhCCC-----CCeeeh
Confidence 369999999998776 89999999543489999999999832222 148999999888888776543 289999
Q ss_pred EeChhHHHHHHHHHh---CCCCcceEEEeCcccc
Q 018984 164 GQSLGGAVALKVHLK---QPNAWSGAILVAPMCK 194 (348)
Q Consensus 164 GhS~Gg~~a~~~a~~---~p~~v~~~vl~~~~~~ 194 (348)
|||+||.+|.++|.+ ....+..++++++...
T Consensus 72 G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 72 GWSFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp EETHHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred ccCccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999999999875 3455899999996543
No 111
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.60 E-value=1.1e-12 Score=106.54 Aligned_cols=252 Identities=17% Similarity=0.147 Sum_probs=145.4
Q ss_pred EecCCCceeEEEEeccCCC---CCceeEEEEecCCCccc----ccchhHHHHHHh-CCceEEeecCCCCccCCCCCCCCC
Q 018984 62 EVNSRGVEIFCKSWLPETS---QPKGLVCYCHGYGDTCT----FFFEGTARKLAS-SGYGVFAMDYPGFGLSAGLHGYIP 133 (348)
Q Consensus 62 ~~~~~g~~l~~~~~~p~~~---~~~~~vv~~HG~~~~~~----~~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~~~~~~ 133 (348)
++......+..++|.|... ...|+|||+||+|.... ..|..+...+++ .+..|+++|||=..+..-| .
T Consensus 66 v~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P----a 141 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP----A 141 (336)
T ss_pred eEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC----c
Confidence 3444556688999998753 34799999999973322 236677777754 4899999999965544333 3
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhC------CCCcceEEEeCccccccccCCChHHHHH
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ------PNAWSGAILVAPMCKIADDMVPPFLVKQ 207 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 207 (348)
.+++..+.+.-+.+..-...+.+..+|+|+|-|.||.+|..++.+. +.++++.|++.|.........+......
T Consensus 142 ~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~ 221 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNL 221 (336)
T ss_pred cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhh
Confidence 5555555555555531112235566899999999999999888652 3579999999998875543222111000
Q ss_pred HHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCC-cEEEEecCCC
Q 018984 208 ILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL-PLLILHGEND 286 (348)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D 286 (348)
. ... ..........++........ .....+..+... .......-..+ |+|++.++.|
T Consensus 222 ~---------~~~-~~~~~~~~~~w~~~lP~~~~-~~~~p~~np~~~-----------~~~~d~~~~~lp~tlv~~ag~D 279 (336)
T KOG1515|consen 222 N---------GSP-ELARPKIDKWWRLLLPNGKT-DLDHPFINPVGN-----------SLAKDLSGLGLPPTLVVVAGYD 279 (336)
T ss_pred c---------CCc-chhHHHHHHHHHHhCCCCCC-CcCCcccccccc-----------ccccCccccCCCceEEEEeCch
Confidence 0 000 00000000011100000000 000000000000 00011222333 5999999999
Q ss_pred CcCCHHHHHHHHHHhcCCCc--eEEEcCCCCcccccCCCh-hHHHHHHHHHHHHHhhh
Q 018984 287 TVTDPSVSKALYEKASSKDK--KCILYKDAFHSLLEGEPD-DMIIRVFADIISWLDDH 341 (348)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~~~-~~~~~~~~~i~~fl~~~ 341 (348)
.+. +....+.++++..++ ++..++++.|.++.-.+. ..+.++.+.+.+|+++.
T Consensus 280 ~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 280 VLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred hhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 886 445556677764444 455689999988776665 55777999999999864
No 112
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.60 E-value=5.6e-13 Score=110.43 Aligned_cols=237 Identities=17% Similarity=0.193 Sum_probs=137.7
Q ss_pred cCCCceeEEEEecc--CCCCCceeEEEEecCCCc---ccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHH
Q 018984 64 NSRGVEIFCKSWLP--ETSQPKGLVCYCHGYGDT---CTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRL 138 (348)
Q Consensus 64 ~~~g~~l~~~~~~p--~~~~~~~~vv~~HG~~~~---~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~ 138 (348)
...+..+.++.|.| ......|+||++||++.. .......+...+...|+.|+++|||-..+. .+...
T Consensus 58 ~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~--------~~p~~ 129 (312)
T COG0657 58 GPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH--------PFPAA 129 (312)
T ss_pred CCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC--------CCCch
Confidence 44455577888988 333347999999998733 333224455555667999999999954332 45555
Q ss_pred HHHHHHHHHHHHcC---CCCCCCCeEEEEeChhHHHHHHHHHhCCC----CcceEEEeCccccccccCCChHHHHHHHHH
Q 018984 139 VDDVIEHYSNIKEY---PEFRTLPSFLFGQSLGGAVALKVHLKQPN----AWSGAILVAPMCKIADDMVPPFLVKQILIG 211 (348)
Q Consensus 139 ~~d~~~~l~~l~~~---~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 211 (348)
++|+.+.+.++..+ .+.+..+|.++|+|.||.+++.++..-.+ ...+.+++.|..+... .......
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~------ 202 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPG------ 202 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhh------
Confidence 67777777777655 24556689999999999999998876443 4789999999877553 1000000
Q ss_pred HHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHH-HhccCCCCcEEEEecCCCCcCC
Q 018984 212 IANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIE-RRLEKVSLPLLILHGENDTVTD 290 (348)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~g~~D~~~~ 290 (348)
...............+............. +... .+. ..+.. -.|+++++|+.|.+.+
T Consensus 203 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~s----------pl~~~~~~~-lPP~~i~~a~~D~l~~ 260 (312)
T COG0657 203 ----YGEADLLDAAAILAWFADLYLGAAPDRED-------PEAS----------PLASDDLSG-LPPTLIQTAEFDPLRD 260 (312)
T ss_pred ----cCCccccCHHHHHHHHHHHhCcCccccCC-------CccC----------ccccccccC-CCCEEEEecCCCcchh
Confidence 00000000000000000000000000000 0000 000 11333 4589999999999987
Q ss_pred HHHHHHHHHHhcC--CCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 291 PSVSKALYEKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 291 ~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
..+.+.+++.. ..++++.+++..|.+..-...+ ....+..+.+|+..
T Consensus 261 --~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~-a~~~~~~~~~~l~~ 309 (312)
T COG0657 261 --EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPE-ARSALRQIAAFLRA 309 (312)
T ss_pred --HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHH-HHHHHHHHHHHHHH
Confidence 55556666653 4467889999999764434322 33456777777763
No 113
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.55 E-value=1e-13 Score=108.32 Aligned_cols=101 Identities=28% Similarity=0.367 Sum_probs=73.2
Q ss_pred EEEEecCCCc---ccccchhHHHHHHh-CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcC---CCCCCC
Q 018984 86 VCYCHGYGDT---CTFFFEGTARKLAS-SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEY---PEFRTL 158 (348)
Q Consensus 86 vv~~HG~~~~---~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~---~~~~~~ 158 (348)
||++||++.. ... ...++..+++ .|+.|+.+|+|-..+ ..+.+.++|+.++++++..+ .+.+..
T Consensus 1 v~~~HGGg~~~g~~~~-~~~~~~~la~~~g~~v~~~~Yrl~p~--------~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES-HWPFAARLAAERGFVVVSIDYRLAPE--------APFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTT-HHHHHHHHHHHHTSEEEEEE---TTT--------SSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHH-HHHHHHHHHhhccEEEEEeecccccc--------ccccccccccccceeeecccccccccccc
Confidence 7999998743 333 3456666665 799999999994321 36778899999999998876 245556
Q ss_pred CeEEEEeChhHHHHHHHHHhCCC----CcceEEEeCccccc
Q 018984 159 PSFLFGQSLGGAVALKVHLKQPN----AWSGAILVAPMCKI 195 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~ 195 (348)
+|+|+|+|.||.+++.++....+ .++++++++|+.+.
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 89999999999999999875332 38999999997654
No 114
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.54 E-value=9.2e-14 Score=123.93 Aligned_cols=117 Identities=19% Similarity=0.137 Sum_probs=89.2
Q ss_pred EEecCCCceeEEEEeccC------CCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCC------
Q 018984 61 YEVNSRGVEIFCKSWLPE------TSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGL------ 128 (348)
Q Consensus 61 ~~~~~~g~~l~~~~~~p~------~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~------ 128 (348)
.+...++.++.|...... ...+.|+|||+||++++... |..+++.|+++||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~-~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKEN-ALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHH-HHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 566777777776653221 01235799999999999887 78899999889999999999999999432
Q ss_pred ----CC---C---------CCChhHHHHHHHHHHHHHH------cC----CCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 129 ----HG---Y---------IPSFDRLVDDVIEHYSNIK------EY----PEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 129 ----~~---~---------~~~~~~~~~d~~~~l~~l~------~~----~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
.. + ..++++.+.|+..+...+. .. ..++..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1 1267889999999999887 11 12456699999999999999999875
No 115
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.53 E-value=3.2e-13 Score=112.98 Aligned_cols=189 Identities=21% Similarity=0.246 Sum_probs=105.6
Q ss_pred CCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccC------CCC---CC---------------CCC---
Q 018984 81 QPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLS------AGL---HG---------------YIP--- 133 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s------~~~---~~---------------~~~--- 133 (348)
...|+|||-||++++... |..++..|+++||-|+++|+|..-.. +.. .. ...
T Consensus 98 ~~~PvvIFSHGlgg~R~~-yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTS-YSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTT-THHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhh-HHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 448999999999999886 89999999999999999999954211 000 00 000
Q ss_pred -------ChhHHHHHHHHHHHHHHc---CC-----------------CCCCCCeEEEEeChhHHHHHHHHHhCCCCcceE
Q 018984 134 -------SFDRLVDDVIEHYSNIKE---YP-----------------EFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGA 186 (348)
Q Consensus 134 -------~~~~~~~d~~~~l~~l~~---~~-----------------~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~ 186 (348)
.++.-+.|+..+++.+.. .. .++-.+|.++|||+||..++..+.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 011224455556655532 10 11123699999999999999988877 569999
Q ss_pred EEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHH
Q 018984 187 ILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEG 266 (348)
Q Consensus 187 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (348)
|+++|+..+...
T Consensus 256 I~LD~W~~Pl~~-------------------------------------------------------------------- 267 (379)
T PF03403_consen 256 ILLDPWMFPLGD-------------------------------------------------------------------- 267 (379)
T ss_dssp EEES---TTS-G--------------------------------------------------------------------
T ss_pred EEeCCcccCCCc--------------------------------------------------------------------
Confidence 999997532100
Q ss_pred HHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhc-CCCceEEEcCCCCcccccC-------------------CChhH
Q 018984 267 IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKAS-SKDKKCILYKDAFHSLLEG-------------------EPDDM 326 (348)
Q Consensus 267 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~-------------------~~~~~ 326 (348)
+....++.|+|+|+.+. +.-......+.+... ..+..+..+.|+.|.-+.+ +|...
T Consensus 268 --~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a 343 (379)
T PF03403_consen 268 --EIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERA 343 (379)
T ss_dssp --GGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHH
T ss_pred --ccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHH
Confidence 12246788999998775 223333333333222 2567788899999974432 45666
Q ss_pred HHHHHHHHHHHHhhhcC
Q 018984 327 IIRVFADIISWLDDHSR 343 (348)
Q Consensus 327 ~~~~~~~i~~fl~~~~~ 343 (348)
.+...+.+++||+++++
T Consensus 344 ~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 344 LRINNRASLAFLRRHLG 360 (379)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 77788889999999976
No 116
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.52 E-value=7e-13 Score=101.46 Aligned_cols=123 Identities=18% Similarity=0.194 Sum_probs=86.2
Q ss_pred eEEEEeccCCCC--CceeEEEEecCCCcccccch--hHHHHHHh-CCceEEeecCCCCccCCCCC----CCCCChhHHHH
Q 018984 70 IFCKSWLPETSQ--PKGLVCYCHGYGDTCTFFFE--GTARKLAS-SGYGVFAMDYPGFGLSAGLH----GYIPSFDRLVD 140 (348)
Q Consensus 70 l~~~~~~p~~~~--~~~~vv~~HG~~~~~~~~~~--~~~~~l~~-~g~~vi~~D~~G~G~s~~~~----~~~~~~~~~~~ 140 (348)
|.|++|.|+... +.|+||++||.+.+...+.. .+ ..+++ .||.|+.++........... .....-...+.
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~-~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGW-NALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCH-HHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 579999998532 46999999999988765221 12 23444 58999999864321111110 00001112345
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccc
Q 018984 141 DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 193 (348)
Q Consensus 141 d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 193 (348)
.+.++++++..+..++..+|++.|+|.||+++..++..+|+.+.++...++..
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 67788888888878888899999999999999999999999999988887654
No 117
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.52 E-value=3.3e-12 Score=102.31 Aligned_cols=248 Identities=13% Similarity=0.101 Sum_probs=138.0
Q ss_pred eeEEEEeccCCC--CCceeEEEEecCCCcccccchhH-HHHHHhCCceEEeecCCCCccCCCCCCC---CCCh-------
Q 018984 69 EIFCKSWLPETS--QPKGLVCYCHGYGDTCTFFFEGT-ARKLASSGYGVFAMDYPGFGLSAGLHGY---IPSF------- 135 (348)
Q Consensus 69 ~l~~~~~~p~~~--~~~~~vv~~HG~~~~~~~~~~~~-~~~l~~~g~~vi~~D~~G~G~s~~~~~~---~~~~------- 135 (348)
+-++....|... +.+|++|.+.|.|.+.-..-..+ +..|.+.|+..+.+..|-||.-.+.... ..+.
T Consensus 76 ~a~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 76 TARFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred heEEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHH
Confidence 344455556543 44889999999887643211233 7788888999999999999976433211 1122
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccc---cccCCChHHHHHHHHHH
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI---ADDMVPPFLVKQILIGI 212 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~---~~~~~~~~~~~~~~~~~ 212 (348)
...+.+...++.|+..+ ++. ++.+.|.||||.+|...|...|..+..+-++++.... .......... ...+
T Consensus 156 ~~~i~E~~~Ll~Wl~~~-G~~--~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~---W~~L 229 (348)
T PF09752_consen 156 RATILESRALLHWLERE-GYG--PLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSIN---WDAL 229 (348)
T ss_pred hHHHHHHHHHHHHHHhc-CCC--ceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCC---HHHH
Confidence 23356778888999887 333 8999999999999999999999877666666543321 1110000000 0000
Q ss_pred HhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCC-----cEEEEecCCCC
Q 018984 213 ANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL-----PLLILHGENDT 287 (348)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----P~l~i~g~~D~ 287 (348)
...+.... +.+. ...... ...............-.....+.....+....+.+..+ .+.++.+++|.
T Consensus 230 ~~q~~~~~------~~~~-~~~~~~-~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~Da 301 (348)
T PF09752_consen 230 EKQFEDTV------YEEE-ISDIPA-QNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDA 301 (348)
T ss_pred HHHhcccc------hhhh-hccccc-CcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCce
Confidence 00000000 0000 000000 00000000000111112222222222222233444433 37889999999
Q ss_pred cCCHHHHHHHHHHhcCCCceEEEcCCCCcc-cccCCChhHHHHHHHHHHHH
Q 018984 288 VTDPSVSKALYEKASSKDKKCILYKDAFHS-LLEGEPDDMIIRVFADIISW 337 (348)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~-~~~~~~~~~~~~~~~~i~~f 337 (348)
+||......+.+.. |++++..+++ ||. .++-+.+. +.+.|.+=
T Consensus 302 YVPr~~v~~Lq~~W--PGsEvR~l~g-GHVsA~L~~q~~----fR~AI~Da 345 (348)
T PF09752_consen 302 YVPRHGVLSLQEIW--PGSEVRYLPG-GHVSAYLLHQEA----FRQAIYDA 345 (348)
T ss_pred EechhhcchHHHhC--CCCeEEEecC-CcEEEeeechHH----HHHHHHHH
Confidence 99999888999998 8999999987 996 33445555 45555443
No 118
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=8.1e-13 Score=119.76 Aligned_cols=232 Identities=19% Similarity=0.215 Sum_probs=150.7
Q ss_pred CCceeEEEEeccCC---CCCceeEEEEecCCCcccc---cchhHHHH-HHhCCceEEeecCCCCccCCCCCCC--CCChh
Q 018984 66 RGVEIFCKSWLPET---SQPKGLVCYCHGYGDTCTF---FFEGTARK-LASSGYGVFAMDYPGFGLSAGLHGY--IPSFD 136 (348)
Q Consensus 66 ~g~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~---~~~~~~~~-l~~~g~~vi~~D~~G~G~s~~~~~~--~~~~~ 136 (348)
+|....+....|++ ++.-|++|.+||++++... +-..+... +...|+.|+.+|.||.|........ ...+.
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG 585 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLG 585 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcC
Confidence 99999999999853 4457999999999873221 11223333 5567999999999998765432100 00110
Q ss_pred -HHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCC-CCcceEEEeCccccccccCCChHHHHHHHHHHHh
Q 018984 137 -RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP-NAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN 214 (348)
Q Consensus 137 -~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (348)
..++|...+++.+.....++..++.++|+|.||.+++..+...| +.+++.+.++|+.+..- ...
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~-yds------------- 651 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLY-YDS------------- 651 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeee-ecc-------------
Confidence 12556666666666655667779999999999999999999998 45566699999876431 000
Q ss_pred hcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcE-EEEecCCCCcCCHHH
Q 018984 215 ILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPL-LILHGENDTVTDPSV 293 (348)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-l~i~g~~D~~~~~~~ 293 (348)
.....++..... .... +. .......+..++.|. |++||+.|..|+.+.
T Consensus 652 -----------~~terymg~p~~----------------~~~~---y~-e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~ 700 (755)
T KOG2100|consen 652 -----------TYTERYMGLPSE----------------NDKG---YE-ESSVSSPANNIKTPKLLLIHGTEDDNVHFQQ 700 (755)
T ss_pred -----------cccHhhcCCCcc----------------ccch---hh-hccccchhhhhccCCEEEEEcCCcCCcCHHH
Confidence 000000000000 0000 00 001123444555565 999999999999999
Q ss_pred HHHHHHHhcCCC--ceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcCCC
Q 018984 294 SKALYEKASSKD--KKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSS 345 (348)
Q Consensus 294 ~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~ 345 (348)
+..+.+.+...+ .+..++|+.+|.+....... .+...+..|+..++...
T Consensus 701 s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~---~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 701 SAILIKALQNAGVPFRLLVYPDENHGISYVEVIS---HLYEKLDRFLRDCFGSP 751 (755)
T ss_pred HHHHHHHHHHCCCceEEEEeCCCCcccccccchH---HHHHHHHHHHHHHcCcc
Confidence 999998886433 67888999999988654322 38899999999766543
No 119
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.50 E-value=9.6e-13 Score=106.76 Aligned_cols=261 Identities=13% Similarity=0.145 Sum_probs=146.7
Q ss_pred EeccCCCC-CceeEEEEecCCCcccc----cchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHH-HHHHHHHH
Q 018984 74 SWLPETSQ-PKGLVCYCHGYGDTCTF----FFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLV-DDVIEHYS 147 (348)
Q Consensus 74 ~~~p~~~~-~~~~vv~~HG~~~~~~~----~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~-~d~~~~l~ 147 (348)
.|.|...+ -+++++++|.+-...-. .-..++..|.++|+.|+.+++++-..+... -.+++++ +.+.+.++
T Consensus 97 qy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~----~~~edYi~e~l~~aid 172 (445)
T COG3243 97 QYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA----KNLEDYILEGLSEAID 172 (445)
T ss_pred ccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh----ccHHHHHHHHHHHHHH
Confidence 34454443 26678999987543221 135688899999999999999987666542 3777777 77777777
Q ss_pred HHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCC-cceEEEeCccccccccCCChHHH-HHHHHHHHhhcCCCcccCCC
Q 018984 148 NIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNA-WSGAILVAPMCKIADDMVPPFLV-KQILIGIANILPKHKLVPQK 225 (348)
Q Consensus 148 ~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 225 (348)
.+.... ..++|.++|+|.||++...+++.++.+ |+.++++.+..++.....-..+. ......+...+......+..
T Consensus 173 ~v~~it--g~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~ 250 (445)
T COG3243 173 TVKDIT--GQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGW 250 (445)
T ss_pred HHHHHh--CccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChH
Confidence 776542 224899999999999999999888877 99999998887765422111000 01111111111111111111
Q ss_pred chhH-------------HHHhchh-hhhhhhcccccccCC-cc-----hHHHH-HHHHhhHHH---------HHhccCCC
Q 018984 226 DLAE-------------AAFRDLK-NRELTKYNVIVYKDK-PR-----LRTAL-ELLKTTEGI---------ERRLEKVS 275 (348)
Q Consensus 226 ~~~~-------------~~~~~~~-~~~~~~~~~~~~~~~-~~-----~~~~~-~~~~~~~~~---------~~~~~~i~ 275 (348)
.+.. .+..... .+....++...+..+ .+ ....+ ..+....-. .-.+.+|+
T Consensus 251 ~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It 330 (445)
T COG3243 251 YMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDIT 330 (445)
T ss_pred HHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcc
Confidence 1111 1111110 001111111111111 11 11111 111111101 12467899
Q ss_pred CcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCccccc-CCChhHHHHHHH----HHHHHHhhhc
Q 018984 276 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE-GEPDDMIIRVFA----DIISWLDDHS 342 (348)
Q Consensus 276 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~----~i~~fl~~~~ 342 (348)
||++++.|++|.++|+.......+.+.+ +++++.. ++||.-.. ..|.....+.+. .+.+|+.+.-
T Consensus 331 ~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 331 CPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred cceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEe-cCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhc
Confidence 9999999999999999999888888843 3555554 57997543 333332333444 7778876543
No 120
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.50 E-value=9.4e-13 Score=112.18 Aligned_cols=138 Identities=19% Similarity=0.160 Sum_probs=109.3
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEe--cCCCccccc--chhHHH---HHHhCCceEEeecCCCCccCCCCC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCH--GYGDTCTFF--FEGTAR---KLASSGYGVFAMDYPGFGLSAGLH 129 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~H--G~~~~~~~~--~~~~~~---~l~~~g~~vi~~D~~G~G~s~~~~ 129 (348)
.....+...||++|+..+|.|.+..+.|+++..+ .+.-....+ -..... .++.+||.|+..|.||.|.|.+..
T Consensus 19 ~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 19 ERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccc
Confidence 4556788999999999999999888899999999 443221011 112223 577899999999999999999876
Q ss_pred CCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccc
Q 018984 130 GYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIAD 197 (348)
Q Consensus 130 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 197 (348)
....+ +.++|-.+.|+|+..+...++ +|..+|.|++|...+.+|+..|..+++++...+..+...
T Consensus 99 ~~~~~--~E~~Dg~D~I~Wia~QpWsNG-~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~ 163 (563)
T COG2936 99 DPESS--REAEDGYDTIEWLAKQPWSNG-NVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYR 163 (563)
T ss_pred ceecc--ccccchhHHHHHHHhCCccCC-eeeeecccHHHHHHHHHHhcCCchheeeccccccccccc
Confidence 55334 467888999999998865544 899999999999999999998888999999888777443
No 121
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.50 E-value=1.1e-12 Score=99.25 Aligned_cols=118 Identities=18% Similarity=0.138 Sum_probs=87.9
Q ss_pred eeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHH
Q 018984 69 EIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSN 148 (348)
Q Consensus 69 ~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 148 (348)
.....++.|......|+|+|+||+.-... +|..+..+++++||-|+++++-..- .+ +-.+.+++..++++|
T Consensus 32 PkpLlI~tP~~~G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~---~p-----~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 32 PKPLLIVTPSEAGTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLF---PP-----DGQDEIKSAASVINW 102 (307)
T ss_pred CCCeEEecCCcCCCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhccc---CC-----CchHHHHHHHHHHHH
Confidence 44556677777777999999999987755 5899999999999999999987421 11 223345666777777
Q ss_pred HHcCC--------CCCCCCeEEEEeChhHHHHHHHHHhCC--CCcceEEEeCccccc
Q 018984 149 IKEYP--------EFRTLPSFLFGQSLGGAVALKVHLKQP--NAWSGAILVAPMCKI 195 (348)
Q Consensus 149 l~~~~--------~~~~~~v~l~GhS~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~ 195 (348)
+.... ..+-.++.++|||.||-.|..+|..+. -.+.++|.++|+...
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 75431 123347999999999999999998763 247899999987653
No 122
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.48 E-value=2.9e-13 Score=104.57 Aligned_cols=180 Identities=19% Similarity=0.209 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCC
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKH 219 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (348)
+-+.+++++|..+..+...+|.|+|.|.||-+|+.+|..+| .|+++|.++|............... ..++..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~~ 75 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS-------KPLPYL 75 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE---------EE---
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC-------ccCCcC
Confidence 44678899999888888789999999999999999999999 6999999998765433211000000 000000
Q ss_pred cccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHH-HHHHH
Q 018984 220 KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSV-SKALY 298 (348)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~ 298 (348)
..... ..................... .......-.++++++|+|+|.|++|.+.|... ++.+.
T Consensus 76 ~~~~~------~~~~~~~~~~~~~~~~~~~~~----------~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~ 139 (213)
T PF08840_consen 76 PFDIS------KFSWNEPGLLRSRYAFELADD----------KAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIE 139 (213)
T ss_dssp -B-GG------G-EE-TTS-EE-TT-B--TTT----------GGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHH
T ss_pred CcChh------hceecCCcceehhhhhhcccc----------cccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHH
Confidence 00000 000000000000000000000 00000001467889999999999999998754 44455
Q ss_pred HHhcC---C-CceEEEcCCCCcccccCC---------------------Ch---hHHHHHHHHHHHHHhhhcC
Q 018984 299 EKASS---K-DKKCILYKDAFHSLLEGE---------------------PD---DMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 299 ~~~~~---~-~~~~~~~~~~gH~~~~~~---------------------~~---~~~~~~~~~i~~fl~~~~~ 343 (348)
+++.. + +.+.+.++++||.+.... ++ ......+..+++||++++.
T Consensus 140 ~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 140 ERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55542 2 467888999999863210 00 1245688999999999875
No 123
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.48 E-value=2e-12 Score=99.45 Aligned_cols=124 Identities=19% Similarity=0.149 Sum_probs=80.0
Q ss_pred cCCCceeEEEEeccCC---CCC-ceeEEEEecCCCcccccchhHHH-------HHHhCCceEEeecCCC-CccCCCCCCC
Q 018984 64 NSRGVEIFCKSWLPET---SQP-KGLVCYCHGYGDTCTFFFEGTAR-------KLASSGYGVFAMDYPG-FGLSAGLHGY 131 (348)
Q Consensus 64 ~~~g~~l~~~~~~p~~---~~~-~~~vv~~HG~~~~~~~~~~~~~~-------~l~~~g~~vi~~D~~G-~G~s~~~~~~ 131 (348)
+.-|.+|.|+.|.|.. ++. .|.|||+||.|..+..-...+.. ...+.++-|+++.+-- +-.++.
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~---- 243 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE---- 243 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc----
Confidence 3568899999999953 233 49999999998765542221111 1111223344444211 111111
Q ss_pred CCChhHHHHHHHHHHH-HHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccc
Q 018984 132 IPSFDRLVDDVIEHYS-NIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 193 (348)
Q Consensus 132 ~~~~~~~~~d~~~~l~-~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 193 (348)
..........++++ .+.....++..+|+++|.|+||+-++.++.++|+.+.+.+++++..
T Consensus 244 --~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 244 --KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred --ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 11223334444444 6667777888899999999999999999999999999999998754
No 124
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.46 E-value=6.1e-12 Score=99.86 Aligned_cols=124 Identities=17% Similarity=0.193 Sum_probs=96.6
Q ss_pred eeEEecCCCceeEEEEeccCCCC---CceeEEEEecCCCcccccchhHHHHHHhC---C------ceEEeecCCCCccCC
Q 018984 59 ESYEVNSRGVEIFCKSWLPETSQ---PKGLVCYCHGYGDTCTFFFEGTARKLASS---G------YGVFAMDYPGFGLSA 126 (348)
Q Consensus 59 ~~~~~~~~g~~l~~~~~~p~~~~---~~~~vv~~HG~~~~~~~~~~~~~~~l~~~---g------~~vi~~D~~G~G~s~ 126 (348)
.++-+...|.+|++....|++.+ ..-+++++||++|+-..+ -.++..|.+. | |.||++.+||+|-|+
T Consensus 125 ~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EF-ykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd 203 (469)
T KOG2565|consen 125 KQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREF-YKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSD 203 (469)
T ss_pred hhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHH-HhhhhhhcCccccCCccceeEEEeccCCCCcccCc
Confidence 34557788999999888765322 234799999999998764 4577777543 2 789999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEe
Q 018984 127 GLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILV 189 (348)
Q Consensus 127 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~ 189 (348)
.+.....+....+.-+..++-.++.+ ++.+-|-.+|..|+..+|..+|++|.|+-+-
T Consensus 204 ~~sk~GFn~~a~ArvmrkLMlRLg~n------kffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 204 APSKTGFNAAATARVMRKLMLRLGYN------KFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred CCccCCccHHHHHHHHHHHHHHhCcc------eeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 88765456666666666666666655 8999999999999999999999999886544
No 125
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.45 E-value=7.7e-12 Score=89.16 Aligned_cols=175 Identities=18% Similarity=0.162 Sum_probs=112.4
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEE
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLF 163 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~ 163 (348)
+.+|++||+.++....|... +.++--.+-.+++.. -.....+++++.+.+.+... .. +++||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~---we~~l~~a~rveq~~--------w~~P~~~dWi~~l~~~v~a~-~~------~~vlV 64 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSR---WESALPNARRVEQDD--------WEAPVLDDWIARLEKEVNAA-EG------PVVLV 64 (181)
T ss_pred ceEEEecCCCCCChhHHHHH---HHhhCccchhcccCC--------CCCCCHHHHHHHHHHHHhcc-CC------CeEEE
Confidence 45899999988875434433 222211122233221 11137888888888888776 22 69999
Q ss_pred EeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhc
Q 018984 164 GQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKY 243 (348)
Q Consensus 164 GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (348)
+||+|+.+++.++.+....|.|++|++|+........+...
T Consensus 65 AHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~--------------------------------------- 105 (181)
T COG3545 65 AHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHL--------------------------------------- 105 (181)
T ss_pred EecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhc---------------------------------------
Confidence 99999999999999877789999999987532211000000
Q ss_pred ccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCC
Q 018984 244 NVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEP 323 (348)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 323 (348)
..+ +. ....++.-|.+++.+.+|++++.+.++.+.+.+ +..++.+.++||..-.+--
T Consensus 106 --~tf-----------------~~-~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w---gs~lv~~g~~GHiN~~sG~ 162 (181)
T COG3545 106 --MTF-----------------DP-IPREPLPFPSVVVASRNDPYVSYEHAEDLANAW---GSALVDVGEGGHINAESGF 162 (181)
T ss_pred --ccc-----------------CC-CccccCCCceeEEEecCCCCCCHHHHHHHHHhc---cHhheecccccccchhhcC
Confidence 000 00 122345669999999999999999999999997 6788888999997533221
Q ss_pred hhHHHHHHHHHHHHHh
Q 018984 324 DDMIIRVFADIISWLD 339 (348)
Q Consensus 324 ~~~~~~~~~~i~~fl~ 339 (348)
.. +.+....+.+++.
T Consensus 163 g~-wpeg~~~l~~~~s 177 (181)
T COG3545 163 GP-WPEGYALLAQLLS 177 (181)
T ss_pred CC-cHHHHHHHHHHhh
Confidence 11 1114555555554
No 126
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=1.5e-11 Score=104.24 Aligned_cols=233 Identities=18% Similarity=0.121 Sum_probs=144.8
Q ss_pred eEEecCCCceeEEEEeccCC---CCCceeEEEEecCCCcccc--cch----hHHHHHHhCCceEEeecCCCCccCCCC--
Q 018984 60 SYEVNSRGVEIFCKSWLPET---SQPKGLVCYCHGYGDTCTF--FFE----GTARKLASSGYGVFAMDYPGFGLSAGL-- 128 (348)
Q Consensus 60 ~~~~~~~g~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~--~~~----~~~~~l~~~g~~vi~~D~~G~G~s~~~-- 128 (348)
..+.+..|.+++..+|.|.+ +++.|+++++-|+++-.-. .|. --...|++.||.|+.+|-||.......
T Consensus 616 f~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE 695 (867)
T KOG2281|consen 616 FSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFE 695 (867)
T ss_pred eeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhH
Confidence 33456778899999999875 4458999999998754211 011 113578889999999999996543211
Q ss_pred -----CCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChH
Q 018984 129 -----HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPF 203 (348)
Q Consensus 129 -----~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~ 203 (348)
.-..-.+++.++-+.-+.+..+ -.+-.+|.+-|||+||++++....++|+-++..|.-+|+....-.
T Consensus 696 ~~ik~kmGqVE~eDQVeglq~Laeq~g---fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~Y----- 767 (867)
T KOG2281|consen 696 SHIKKKMGQVEVEDQVEGLQMLAEQTG---FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLY----- 767 (867)
T ss_pred HHHhhccCeeeehhhHHHHHHHHHhcC---cccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeee-----
Confidence 0011245555655555555443 134458999999999999999999999988888877776532110
Q ss_pred HHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEec
Q 018984 204 LVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHG 283 (348)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 283 (348)
.....+.++..+...+ ..+.. .......+.+..-....|++||
T Consensus 768 --------------------DTgYTERYMg~P~~nE------------~gY~a-----gSV~~~VeklpdepnRLlLvHG 810 (867)
T KOG2281|consen 768 --------------------DTGYTERYMGYPDNNE------------HGYGA-----GSVAGHVEKLPDEPNRLLLVHG 810 (867)
T ss_pred --------------------cccchhhhcCCCccch------------hcccc-----hhHHHHHhhCCCCCceEEEEec
Confidence 0000000110000000 00000 0000112344444567999999
Q ss_pred CCCCcCCHHHHHHHHHHhc--CCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 284 ENDTVTDPSVSKALYEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 284 ~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
--|..|.......+...+. ++.-+++++|+.-|.+-..+... -+-..+..|+++
T Consensus 811 liDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~---~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 811 LIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGI---YYEARLLHFLQE 866 (867)
T ss_pred ccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccch---hHHHHHHHHHhh
Confidence 9999998888777777664 34568999999999876544333 256677888865
No 127
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.43 E-value=2.5e-12 Score=93.50 Aligned_cols=205 Identities=15% Similarity=0.188 Sum_probs=128.0
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCC---CcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYG---DTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIP 133 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~ 133 (348)
..+..-...+| +-...+|+|.+. .+++||+||+- ++...+. .++..+.++||+|..+++ +.+... .
T Consensus 44 r~e~l~Yg~~g-~q~VDIwg~~~~--~klfIfIHGGYW~~g~rk~cl-siv~~a~~~gY~vasvgY---~l~~q~----h 112 (270)
T KOG4627|consen 44 RVEHLRYGEGG-RQLVDIWGSTNQ--AKLFIFIHGGYWQEGDRKMCL-SIVGPAVRRGYRVASVGY---NLCPQV----H 112 (270)
T ss_pred chhccccCCCC-ceEEEEecCCCC--ccEEEEEecchhhcCchhccc-chhhhhhhcCeEEEEecc---CcCccc----c
Confidence 34444444455 566778887543 67999999974 3333323 344555688999999865 333322 3
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh-CCCCcceEEEeCccccccccCCChHHHHHHHHHH
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK-QPNAWSGAILVAPMCKIADDMVPPFLVKQILIGI 212 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 212 (348)
++++.+.++...++++..... ....+.+.|||.|+.+|+.+..+ +..+|.++++.++......-..
T Consensus 113 tL~qt~~~~~~gv~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~------------ 179 (270)
T KOG4627|consen 113 TLEQTMTQFTHGVNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSN------------ 179 (270)
T ss_pred cHHHHHHHHHHHHHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhC------------
Confidence 677777777777777765422 12257788999999999987765 3457999999888654321100
Q ss_pred HhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHH
Q 018984 213 ANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS 292 (348)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 292 (348)
.-.. ..-.+.... ..........+..+++|+|++.|.+|.-.-.+
T Consensus 180 --te~g-------------------------------~dlgLt~~~--ae~~Scdl~~~~~v~~~ilVv~~~~espklie 224 (270)
T KOG4627|consen 180 --TESG-------------------------------NDLGLTERN--AESVSCDLWEYTDVTVWILVVAAEHESPKLIE 224 (270)
T ss_pred --Cccc-------------------------------cccCcccch--hhhcCccHHHhcCceeeeeEeeecccCcHHHH
Confidence 0000 000000000 00000011245678999999999999766667
Q ss_pred HHHHHHHHhcCCCceEEEcCCCCcccccCC
Q 018984 293 VSKALYEKASSKDKKCILYKDAFHSLLEGE 322 (348)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 322 (348)
+.+.+...+ ..+.+..+++.+|+-..++
T Consensus 225 Qnrdf~~q~--~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 225 QNRDFADQL--RKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred hhhhHHHHh--hhcceeecCCcchhhHHHH
Confidence 788888887 5688999999999866543
No 128
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.41 E-value=5e-11 Score=102.73 Aligned_cols=127 Identities=17% Similarity=0.198 Sum_probs=88.6
Q ss_pred CceeEEEEeccCCC-CCceeEEEEecCCCcccccchhHH------------------HHHHhCCceEEeecCC-CCccCC
Q 018984 67 GVEIFCKSWLPETS-QPKGLVCYCHGYGDTCTFFFEGTA------------------RKLASSGYGVFAMDYP-GFGLSA 126 (348)
Q Consensus 67 g~~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~~~~~~------------------~~l~~~g~~vi~~D~~-G~G~s~ 126 (348)
+..++|+.+...+. ...|+||+++|++|+++. +..+. ..+.+. ..++.+|.| |+|.|.
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~ 137 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSY 137 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCccc
Confidence 67899998876533 347999999999888754 21111 012222 678999975 888886
Q ss_pred CCCC-CCCChhHHHHHHHHHHHHHHcC-CCCCCCCeEEEEeChhHHHHHHHHHhC----------CCCcceEEEeCcccc
Q 018984 127 GLHG-YIPSFDRLVDDVIEHYSNIKEY-PEFRTLPSFLFGQSLGGAVALKVHLKQ----------PNAWSGAILVAPMCK 194 (348)
Q Consensus 127 ~~~~-~~~~~~~~~~d~~~~l~~l~~~-~~~~~~~v~l~GhS~Gg~~a~~~a~~~----------p~~v~~~vl~~~~~~ 194 (348)
.... ...+.++.++|+.++++....+ +.+...+++|+|||+||..+..+|.+. +-.++++++.++..+
T Consensus 138 ~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 138 ADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 5332 2235678899999999876533 234456999999999999988877652 124789999888776
Q ss_pred c
Q 018984 195 I 195 (348)
Q Consensus 195 ~ 195 (348)
.
T Consensus 218 p 218 (462)
T PTZ00472 218 P 218 (462)
T ss_pred h
Confidence 4
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.39 E-value=4.4e-12 Score=92.69 Aligned_cols=102 Identities=19% Similarity=0.222 Sum_probs=80.7
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEE
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLF 163 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~ 163 (348)
..+||+-|=|+=.. .-..+++.|+++|+.|+.+|-+-+-.+. -+.++.+.|+..+++....+ ....+++|+
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~--w~~~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRAR--WGRKRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHH--hCCceEEEE
Confidence 45788887665444 3577899999999999999977554442 27788899999999998876 455689999
Q ss_pred EeChhHHHHHHHHHhCC----CCcceEEEeCcccc
Q 018984 164 GQSLGGAVALKVHLKQP----NAWSGAILVAPMCK 194 (348)
Q Consensus 164 GhS~Gg~~a~~~a~~~p----~~v~~~vl~~~~~~ 194 (348)
|+|+|+-+.-....+.| ++|+.++|++|...
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 99999988887777766 47999999998643
No 130
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.38 E-value=3.9e-11 Score=94.17 Aligned_cols=208 Identities=18% Similarity=0.145 Sum_probs=122.2
Q ss_pred ceeEEEEecCCCcccccchhHHHHHH-hCCc--eE--EeecCCCC----ccC----CCC------CCCC-CChhHHHHHH
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLA-SSGY--GV--FAMDYPGF----GLS----AGL------HGYI-PSFDRLVDDV 142 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~-~~g~--~v--i~~D~~G~----G~s----~~~------~~~~-~~~~~~~~d~ 142 (348)
..+.||+||++++... +..++..+. +.|. .+ +.++--|+ |.- ..| .... .++...+..+
T Consensus 11 ~tPTifihG~~gt~~s-~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANS-FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp -EEEEEE--TTGGCCC-CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCcEEEECCCCCChhH-HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 5679999999999887 889999996 5543 23 33343332 211 111 1111 3577889999
Q ss_pred HHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC-----CcceEEEeCccccccccCCChHHHHHHHHHHHhhcC
Q 018984 143 IEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPMCKIADDMVPPFLVKQILIGIANILP 217 (348)
Q Consensus 143 ~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (348)
..++.+|..+.++ .++-+|||||||..++.++..+.. .+..+|.+++++............
T Consensus 90 ~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~------------ 155 (255)
T PF06028_consen 90 KKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQ------------ 155 (255)
T ss_dssp HHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTT------------
T ss_pred HHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchh------------
Confidence 9999999988544 489999999999999999887532 489999999876543221100000
Q ss_pred CCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecC------CCCcCCH
Q 018984 218 KHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGE------NDTVTDP 291 (348)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~------~D~~~~~ 291 (348)
.. . .-..+......+. ........--.-++.+|-|+|. .|..||.
T Consensus 156 -----------------------~~--~-~~~gp~~~~~~y~---~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~ 206 (255)
T PF06028_consen 156 -----------------------ND--L-NKNGPKSMTPMYQ---DLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPN 206 (255)
T ss_dssp -----------------------T---C-STT-BSS--HHHH---HHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBH
T ss_pred -----------------------hh--h-cccCCcccCHHHH---HHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeH
Confidence 00 0 0000000111111 1101100111235789999998 7999999
Q ss_pred HHHHHHHHHhcC--CCceEEEcC--CCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 292 SVSKALYEKASS--KDKKCILYK--DAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 292 ~~~~~~~~~~~~--~~~~~~~~~--~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
..+..+...+.. ...+-.++. ++.|.-..++++ +.+.|.+||-
T Consensus 207 ~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~-----V~~~I~~FLw 253 (255)
T PF06028_consen 207 ASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQ-----VDKLIIQFLW 253 (255)
T ss_dssp HHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHH-----HHHHHHHHHC
T ss_pred HHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHH-----HHHHHHHHhc
Confidence 988888777753 223444554 468988877765 8899999984
No 131
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.38 E-value=7e-11 Score=95.78 Aligned_cols=233 Identities=24% Similarity=0.283 Sum_probs=120.9
Q ss_pred hhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCC---CC-CCCCeEEEEeChhHHHHHHHH
Q 018984 101 EGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYP---EF-RTLPSFLFGQSLGGAVALKVH 176 (348)
Q Consensus 101 ~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~---~~-~~~~v~l~GhS~Gg~~a~~~a 176 (348)
..++..+.++||.|+++|+.|.|.. +. .-......+.+.++..+... +. .+.++.++|||.||.-++..+
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~-----y~-~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTP-----YL-NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCc-----cc-CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 3456677789999999999999871 11 22233344444444443221 12 245899999999999987766
Q ss_pred HhC----CCC---cceEEEeCccccccccC------CChHHHHHHHHHHHhhcCCCcccCCCchhH---HHHhchhhhhh
Q 018984 177 LKQ----PNA---WSGAILVAPMCKIADDM------VPPFLVKQILIGIANILPKHKLVPQKDLAE---AAFRDLKNREL 240 (348)
Q Consensus 177 ~~~----p~~---v~~~vl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 240 (348)
... |+. +.+.+..+++.+..... .........+..+....+.........+.. ..+........
T Consensus 90 ~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~ 169 (290)
T PF03583_consen 90 ELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCL 169 (290)
T ss_pred HHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhH
Confidence 442 442 67777777765532211 001111122222222222211000000000 01111100000
Q ss_pred ----hhcccccc--------cCCcchHHHHHHHHhhHHHHH---hccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcC--
Q 018984 241 ----TKYNVIVY--------KDKPRLRTALELLKTTEGIER---RLEKVSLPLLILHGENDTVTDPSVSKALYEKASS-- 303 (348)
Q Consensus 241 ----~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 303 (348)
.......+ ...........+.....+..- .-...++|+++.+|..|.++|......+.+.++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G 249 (290)
T PF03583_consen 170 ADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAG 249 (290)
T ss_pred HHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcC
Confidence 00000000 000010000011111111100 1124479999999999999999999999888863
Q ss_pred -CCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhcCCCC
Q 018984 304 -KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSST 346 (348)
Q Consensus 304 -~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~~~ 346 (348)
.+++++.+++.+|....-. -.....+||.+++...+
T Consensus 250 ~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 250 GADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCCCC
Confidence 3578888899999754311 33567799999998765
No 132
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.36 E-value=7.3e-13 Score=106.33 Aligned_cols=225 Identities=23% Similarity=0.164 Sum_probs=128.8
Q ss_pred CceeEEEEeccCCCC------CceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCC--ccCCCCCCC-----CC
Q 018984 67 GVEIFCKSWLPETSQ------PKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGF--GLSAGLHGY-----IP 133 (348)
Q Consensus 67 g~~l~~~~~~p~~~~------~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~--G~s~~~~~~-----~~ 133 (348)
+.++...+|.|..+. ..|+|++-||.|+.... +..+++.+++.||.|.++|.+|. |........ ..
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~-f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~ 127 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTG-FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPA 127 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCccc-hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchh
Confidence 556666666665332 37999999999999776 78999999999999999999994 333221111 01
Q ss_pred ChhHHHHHHHHHHHHHHcC---C----CCCCCCeEEEEeChhHHHHHHHHHhCCCCcce--------EEEeCcccccccc
Q 018984 134 SFDRLVDDVIEHYSNIKEY---P----EFRTLPSFLFGQSLGGAVALKVHLKQPNAWSG--------AILVAPMCKIADD 198 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~---~----~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~--------~vl~~~~~~~~~~ 198 (348)
.+-+...|+..+|+++... . ..+..+|.++|||+||+.++.++....+.... .+...+...
T Consensus 128 ~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~---- 203 (365)
T COG4188 128 EWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGL---- 203 (365)
T ss_pred hhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCc----
Confidence 2334466777777777654 2 34456899999999999999988665431111 111111000
Q ss_pred CCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcE
Q 018984 199 MVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPL 278 (348)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 278 (348)
.... .... ...... ....-+++...+ ......+.... ... ...+.++++|+
T Consensus 204 --~~~~---l~q~--------~av~~~-~~~~~~rDprir-------avvA~~p~~~~-------~Fg-~tgl~~v~~P~ 254 (365)
T COG4188 204 --NGRL---LNQC--------AAVWLP-RQAYDLRDPRIR-------AVVAINPALGM-------IFG-TTGLVKVTDPV 254 (365)
T ss_pred --Chhh---hccc--------cccccc-hhhhccccccce-------eeeeccCCccc-------ccc-cccceeeecce
Confidence 0000 0000 000000 000000000000 00000000000 000 24678899999
Q ss_pred EEEecCCCCcCCHH-HHHHHHHHhcCCCceEEEcCCCCcccccCCChh
Q 018984 279 LILHGENDTVTDPS-VSKALYEKASSKDKKCILYKDAFHSLLEGEPDD 325 (348)
Q Consensus 279 l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 325 (348)
+++.|..|.+.|.. ........++++..-+..++++.|+-+++-..+
T Consensus 255 ~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 255 LLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred eeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 99999999977664 344445566444457888999999988876665
No 133
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.31 E-value=1.8e-10 Score=85.40 Aligned_cols=179 Identities=20% Similarity=0.162 Sum_probs=109.2
Q ss_pred ceeEEEEecCCCcccccc---hhHHHHHHhCCceEEeecCCCC----ccCC--C------CCC--------------CCC
Q 018984 83 KGLVCYCHGYGDTCTFFF---EGTARKLASSGYGVFAMDYPGF----GLSA--G------LHG--------------YIP 133 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~---~~~~~~l~~~g~~vi~~D~~G~----G~s~--~------~~~--------------~~~ 133 (348)
++-|||+||+-.+...+- ..+-+.+.+. +..+.+|-|-- +.++ . +.. ...
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 567999999988776521 2344455444 77777776621 1111 0 000 000
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh---------CCCCcceEEEeCccccccccCCChHH
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK---------QPNAWSGAILVAPMCKIADDMVPPFL 204 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~---------~p~~v~~~vl~~~~~~~~~~~~~~~~ 204 (348)
.....-+-+.-+.+++..+..++ .|+|+|.|+.++..++.. .| .++-+|++++.......
T Consensus 84 ~~~~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~~~~~------ 152 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKFPSKK------ 152 (230)
T ss_pred cccChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCCCcch------
Confidence 11111222444445555543332 599999999999988872 12 26788888776432100
Q ss_pred HHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecC
Q 018984 205 VKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGE 284 (348)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~ 284 (348)
.+-......+++|.|.|.|+
T Consensus 153 ------------------------------------------------------------~~~~~~~~~i~~PSLHi~G~ 172 (230)
T KOG2551|consen 153 ------------------------------------------------------------LDESAYKRPLSTPSLHIFGE 172 (230)
T ss_pred ------------------------------------------------------------hhhhhhccCCCCCeeEEecc
Confidence 01112345789999999999
Q ss_pred CCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 285 NDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 285 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
.|.++|...+..+++.+ ++..+..-+ +||.+.... . ..+.|.+||...+
T Consensus 173 ~D~iv~~~~s~~L~~~~--~~a~vl~Hp-ggH~VP~~~--~----~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 173 TDTIVPSERSEQLAESF--KDATVLEHP-GGHIVPNKA--K----YKEKIADFIQSFL 221 (230)
T ss_pred cceeecchHHHHHHHhc--CCCeEEecC-CCccCCCch--H----HHHHHHHHHHHHH
Confidence 99999999999999999 555444444 689988654 3 5666666666543
No 134
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.31 E-value=3.1e-10 Score=85.34 Aligned_cols=249 Identities=14% Similarity=0.122 Sum_probs=137.3
Q ss_pred CCCCceeEEEEecCCCcccccchhHHHHHHhC---CceEEeecCCCCccCC---C-----CCCCCCChhHHHHHHHHHHH
Q 018984 79 TSQPKGLVCYCHGYGDTCTFFFEGTARKLASS---GYGVFAMDYPGFGLSA---G-----LHGYIPSFDRLVDDVIEHYS 147 (348)
Q Consensus 79 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~---g~~vi~~D~~G~G~s~---~-----~~~~~~~~~~~~~d~~~~l~ 147 (348)
.+..++.|+++.|.+|.... |..++..|... .+.++.+-..||-.-+ . .....++++++++--.++++
T Consensus 25 ~~~~~~li~~IpGNPG~~gF-Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGF-YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCCCceEEEEecCCCCchhH-HHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 34568899999999999775 88888887653 2568888888885433 1 11234578888887777777
Q ss_pred HHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCC--CCcceEEEeCccccccccCCChHHHHHHHHHHHhh---cCCCccc
Q 018984 148 NIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP--NAWSGAILVAPMCKIADDMVPPFLVKQILIGIANI---LPKHKLV 222 (348)
Q Consensus 148 ~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 222 (348)
....+ +.+++++|||.|+++.+.+..... -.|..++++-|.................+..+... .......
T Consensus 104 ~~~Pk----~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~ 179 (301)
T KOG3975|consen 104 EYVPK----DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWI 179 (301)
T ss_pred HhCCC----CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeee
Confidence 66543 458999999999999999887433 24777787776554222111111111111000000 0000000
Q ss_pred CCCchhHHHHh-----chhhhhhhhcccccccCCcchHH-----HHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHH
Q 018984 223 PQKDLAEAAFR-----DLKNRELTKYNVIVYKDKPRLRT-----ALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS 292 (348)
Q Consensus 223 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 292 (348)
....+.+.... ..............+......+. .-++..-.....+.+++-.+-+.+.+|..|.+||.+
T Consensus 180 ~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~ 259 (301)
T KOG3975|consen 180 LLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSH 259 (301)
T ss_pred cChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchH
Confidence 00000100000 00000000000000000000000 011111111122344555678899999999999999
Q ss_pred HHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHH
Q 018984 293 VSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISW 337 (348)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~f 337 (348)
....+.+.++..++++-+ ++..|.+.....+. ++..+.+.
T Consensus 260 ~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~----ma~~v~d~ 299 (301)
T KOG3975|consen 260 YYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQY----MANAVFDM 299 (301)
T ss_pred HHHHHhhhcchhceeecc-ccCCcceeecccHH----HHHHHHHh
Confidence 999999999655666666 78999999888777 44444443
No 135
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.31 E-value=2e-09 Score=85.54 Aligned_cols=118 Identities=23% Similarity=0.310 Sum_probs=86.0
Q ss_pred eeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccc------hhHHHHHHhCCceEEeecCCCCccCCCCCCC
Q 018984 58 EESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFF------EGTARKLASSGYGVFAMDYPGFGLSAGLHGY 131 (348)
Q Consensus 58 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~------~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~ 131 (348)
...+.+..|+..|-.....-+..++...||+.-|.++.-+... ..+.+.....|.+|+.+++||.|.|.+..
T Consensus 112 ~kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-- 189 (365)
T PF05677_consen 112 VKRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-- 189 (365)
T ss_pred eeeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--
Confidence 3445566689888776654333455778999999887655411 12323333358999999999999998764
Q ss_pred CCChhHHHHHHHHHHHHHHcCC-CCCCCCeEEEEeChhHHHHHHHHHhC
Q 018984 132 IPSFDRLVDDVIEHYSNIKEYP-EFRTLPSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 132 ~~~~~~~~~d~~~~l~~l~~~~-~~~~~~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
+.++++.|-.+.++++..+. +....+|++.|||+||.++..++.++
T Consensus 190 --s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 --SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred --CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 56899999999999998642 34556899999999999998876664
No 136
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.31 E-value=2.3e-11 Score=94.28 Aligned_cols=164 Identities=22% Similarity=0.237 Sum_probs=81.8
Q ss_pred ceeEEEEecCCCccccc---chhHHHHHHhCCceEEeecCCCCc-----cCC------------CCC------C----CC
Q 018984 83 KGLVCYCHGYGDTCTFF---FEGTARKLASSGYGVFAMDYPGFG-----LSA------------GLH------G----YI 132 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~---~~~~~~~l~~~g~~vi~~D~~G~G-----~s~------------~~~------~----~~ 132 (348)
++.||++||++.+...+ ...+...|.+.++.++.+|-|--- ... .+. . ..
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 57799999999998763 223445554436888888755321 110 000 0 01
Q ss_pred CChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhC--------CCCcceEEEeCccccccccCCChHH
Q 018984 133 PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ--------PNAWSGAILVAPMCKIADDMVPPFL 204 (348)
Q Consensus 133 ~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~~~~~~~~~~~ 204 (348)
..+++.++.+.+.++..+. -..|+|+|.||.+|..++... ...++.+|++++.........
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-------fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~---- 152 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-------FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQ---- 152 (212)
T ss_dssp ---HHHHHHHHHHHHHH----------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GT----
T ss_pred cCHHHHHHHHHHHHHhcCC-------eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhh----
Confidence 1233444444444444221 257999999999999887531 224899999987654321100
Q ss_pred HHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecC
Q 018984 205 VKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGE 284 (348)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~ 284 (348)
.. -.-.+|++|+|.|+|+
T Consensus 153 -------------------------------------------------------------~~-~~~~~i~iPtlHv~G~ 170 (212)
T PF03959_consen 153 -------------------------------------------------------------EL-YDEPKISIPTLHVIGE 170 (212)
T ss_dssp -------------------------------------------------------------TT-T--TT---EEEEEEET
T ss_pred -------------------------------------------------------------hh-hccccCCCCeEEEEeC
Confidence 00 0224679999999999
Q ss_pred CCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccC
Q 018984 285 NDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEG 321 (348)
Q Consensus 285 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 321 (348)
+|.+++++..+.+.+.+... .+++..+ +||.+...
T Consensus 171 ~D~~~~~~~s~~L~~~~~~~-~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 171 NDPVVPPERSEALAEMFDPD-ARVIEHD-GGHHVPRK 205 (212)
T ss_dssp T-SSS-HHHHHHHHHHHHHH-EEEEEES-SSSS----
T ss_pred CCCCcchHHHHHHHHhccCC-cEEEEEC-CCCcCcCC
Confidence 99999999999999888432 5666666 57887753
No 137
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.30 E-value=3.4e-10 Score=87.88 Aligned_cols=134 Identities=17% Similarity=0.121 Sum_probs=95.4
Q ss_pred eeeEEecCCCceeEEEEeccCCCC-CceeEEEEecCCCcccccchhHH--HHHH-hCCceEEeecCC-C------CccCC
Q 018984 58 EESYEVNSRGVEIFCKSWLPETSQ-PKGLVCYCHGYGDTCTFFFEGTA--RKLA-SSGYGVFAMDYP-G------FGLSA 126 (348)
Q Consensus 58 ~~~~~~~~~g~~l~~~~~~p~~~~-~~~~vv~~HG~~~~~~~~~~~~~--~~l~-~~g~~vi~~D~~-G------~G~s~ 126 (348)
.+......+|.+..|++|.|.... +.|+||++||.+++... +.... +.|+ ..||-|+.+|-- + .+.+.
T Consensus 35 ~~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~ 113 (312)
T COG3509 35 SSVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-QLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWF 113 (312)
T ss_pred CCccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHH-hhcccchhhhhcccCcEEECcCccccccCCCcccccC
Confidence 334456778889999999997533 36899999999887654 22222 3343 459999999522 1 12221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccc
Q 018984 127 GLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 193 (348)
Q Consensus 127 ~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 193 (348)
.+....... +.+..+.+++..+..+..++..+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 114 ~p~~~~~g~-ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 114 GPADRRRGV-DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CcccccCCc-cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 121111122 346778888888888888888899999999999999999999999999998888765
No 138
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.30 E-value=1e-10 Score=86.23 Aligned_cols=182 Identities=19% Similarity=0.208 Sum_probs=121.7
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCC-----------------CCCCCCCChhHHHHHHHHH
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSA-----------------GLHGYIPSFDRLVDDVIEH 145 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~-----------------~~~~~~~~~~~~~~d~~~~ 145 (348)
..+||++||.+.+... |..+.+.|.-.+..-+++..|-.-.+. .......++...++.+..+
T Consensus 3 ~atIi~LHglGDsg~~-~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG-WAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCcc-HHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 3579999999999887 666777665566777777544332211 0001112445556666777
Q ss_pred HHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCC
Q 018984 146 YSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQK 225 (348)
Q Consensus 146 l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (348)
+++.... +.+..+|.+-|.|+||.+++..+..+|..+.+++-..+.........+.+
T Consensus 82 i~~e~~~-Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~---------------------- 138 (206)
T KOG2112|consen 82 IDNEPAN-GIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGW---------------------- 138 (206)
T ss_pred HHHHHHc-CCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCC----------------------
Confidence 7766554 34555799999999999999999999888888877766543111000000
Q ss_pred chhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcC--
Q 018984 226 DLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS-- 303 (348)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 303 (348)
.... + ..|++..||+.|++||....+...+.+..
T Consensus 139 ------------------------------------------~~~~-~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~ 174 (206)
T KOG2112|consen 139 ------------------------------------------LPGV-N-YTPILLCHGTADPLVPFRFGEKSAQFLKSLG 174 (206)
T ss_pred ------------------------------------------cccc-C-cchhheecccCCceeehHHHHHHHHHHHHcC
Confidence 0000 1 67999999999999999877776666542
Q ss_pred CCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 304 KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 304 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
..+++..+++.+|.... + =++.+..|+++
T Consensus 175 ~~~~f~~y~g~~h~~~~---~-----e~~~~~~~~~~ 203 (206)
T KOG2112|consen 175 VRVTFKPYPGLGHSTSP---Q-----ELDDLKSWIKT 203 (206)
T ss_pred CceeeeecCCccccccH---H-----HHHHHHHHHHH
Confidence 33788899999998754 3 36678888876
No 139
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.24 E-value=2.5e-10 Score=88.86 Aligned_cols=109 Identities=19% Similarity=0.186 Sum_probs=71.5
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHh--------CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCC-
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLAS--------SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYP- 153 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~- 153 (348)
+.+|||+||.+++... ++.+...+.+ ..++++++|+......-. . ..+.+..+-+.+.++.+....
T Consensus 4 g~pVlFIhG~~Gs~~q-~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~--g--~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQ-VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH--G--RTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCCCCHhH-HHHHHHHHhhhhhhccCccceeEEEeccCccccccc--c--ccHHHHHHHHHHHHHHHHHhhh
Confidence 4579999999888765 5666655521 247889999876432211 1 134444444444454443321
Q ss_pred --CCCCCCeEEEEeChhHHHHHHHHHhCC---CCcceEEEeCcccccc
Q 018984 154 --EFRTLPSFLFGQSLGGAVALKVHLKQP---NAWSGAILVAPMCKIA 196 (348)
Q Consensus 154 --~~~~~~v~l~GhS~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~ 196 (348)
..+..+|+||||||||.++..++...+ +.|+.+|.++++....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 235568999999999999988876543 5799999998776443
No 140
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.24 E-value=6.2e-10 Score=86.64 Aligned_cols=189 Identities=16% Similarity=0.235 Sum_probs=119.9
Q ss_pred CCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCC------CCCCC--C--------------------
Q 018984 81 QPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSA------GLHGY--I-------------------- 132 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~------~~~~~--~-------------------- 132 (348)
...|+|||-||+|++... |..+.-.|+++||.|.+++.|-+..+. ..... .
T Consensus 116 ~k~PvvvFSHGLggsRt~-YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTL-YSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchhh-HHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 447999999999999775 889999999999999999999775431 10000 0
Q ss_pred CChhHHHHHHHHHHHH---HHcC------------------CCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCc
Q 018984 133 PSFDRLVDDVIEHYSN---IKEY------------------PEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 191 (348)
Q Consensus 133 ~~~~~~~~d~~~~l~~---l~~~------------------~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~ 191 (348)
.....-+.++..+++- +... ..++..++.++|||+||..++.....+.+ +++.|+++.
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc-eeeeeeeee
Confidence 0011223343333332 2221 11223468899999999999888776654 888888887
Q ss_pred cccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhc
Q 018984 192 MCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRL 271 (348)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (348)
+..+-+ ....
T Consensus 274 WM~Pl~----------------------------------------------------------------------~~~~ 283 (399)
T KOG3847|consen 274 WMFPLD----------------------------------------------------------------------QLQY 283 (399)
T ss_pred eecccc----------------------------------------------------------------------hhhh
Confidence 653211 0244
Q ss_pred cCCCCcEEEEecCCCCcCCHHHHHHHHHHhc-CCCceEEEcCCCCcccccC-------------------CChhHHHHHH
Q 018984 272 EKVSLPLLILHGENDTVTDPSVSKALYEKAS-SKDKKCILYKDAFHSLLEG-------------------EPDDMIIRVF 331 (348)
Q Consensus 272 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~-------------------~~~~~~~~~~ 331 (348)
++++.|+++|.-+ |... .+...-+.+... +.+-.+.++.|+=|-.+.+ +|-+..+...
T Consensus 284 ~~arqP~~finv~-~fQ~-~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~ 361 (399)
T KOG3847|consen 284 SQARQPTLFINVE-DFQW-NENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAI 361 (399)
T ss_pred hhccCCeEEEEcc-cccc-hhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHH
Confidence 6778899999843 3332 344444444443 2345677788888865543 3445555667
Q ss_pred HHHHHHHhhhcC
Q 018984 332 ADIISWLDDHSR 343 (348)
Q Consensus 332 ~~i~~fl~~~~~ 343 (348)
+..+.||++++.
T Consensus 362 r~slaFLq~h~d 373 (399)
T KOG3847|consen 362 RASLAFLQKHLD 373 (399)
T ss_pred HHHHHHHHhhhh
Confidence 777888888764
No 141
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.24 E-value=6.2e-10 Score=110.12 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=82.4
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEE
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFL 162 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 162 (348)
.++++++||++++... |..+.+.|.. ++.|++++.+|++.+.. ..++++++++++.+.++.+.. ..++++
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~~l~~-~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~-----~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSRYLDP-QWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQP-----HGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHHhcCC-CCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCC-----CCCEEE
Confidence 4679999999998775 8889888854 59999999999986532 225899999999988887542 227999
Q ss_pred EEeChhHHHHHHHHHh---CCCCcceEEEeCccc
Q 018984 163 FGQSLGGAVALKVHLK---QPNAWSGAILVAPMC 193 (348)
Q Consensus 163 ~GhS~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 193 (348)
+|||+||.+|..+|.+ .++++..++++++..
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999999999985 577899999988643
No 142
>PRK04940 hypothetical protein; Provisional
Probab=99.19 E-value=3.1e-09 Score=77.79 Aligned_cols=175 Identities=13% Similarity=0.160 Sum_probs=96.2
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEe
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQ 165 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~Gh 165 (348)
||++||+.++...-. .-+..+. + +.+|.+-+-.+ .....+.+..+.+.+..+.... . .+++.|||.
T Consensus 2 IlYlHGF~SS~~S~~-~Ka~~l~---~--~~p~~~~~~l~------~~~P~~a~~~l~~~i~~~~~~~-~-~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNH-EKVLQLQ---F--IDPDVRLISYS------TLHPKHDMQHLLKEVDKMLQLS-D-DERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccH-HHHHhhe---e--eCCCCeEEECC------CCCHHHHHHHHHHHHHHhhhcc-C-CCCcEEEEe
Confidence 899999998876511 1122221 1 12332222111 0134444445555554332210 0 127899999
Q ss_pred ChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhccc
Q 018984 166 SLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNV 245 (348)
Q Consensus 166 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (348)
|+||+.|..++.++. + ..|+++|...+... +...+.....
T Consensus 68 SLGGyyA~~La~~~g--~-~aVLiNPAv~P~~~-------------L~~~ig~~~~------------------------ 107 (180)
T PRK04940 68 GLGGYWAERIGFLCG--I-RQVIFNPNLFPEEN-------------MEGKIDRPEE------------------------ 107 (180)
T ss_pred ChHHHHHHHHHHHHC--C-CEEEECCCCChHHH-------------HHHHhCCCcc------------------------
Confidence 999999999999986 3 67788998754211 0000000000
Q ss_pred ccccCCcchHHHHHHHHhhHHHHHhcc-CCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCc-eEEEcCCCCcccccCCC
Q 018984 246 IVYKDKPRLRTALELLKTTEGIERRLE-KVSLPLLILHGENDTVTDPSVSKALYEKASSKDK-KCILYKDAFHSLLEGEP 323 (348)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~ 323 (348)
+. .+. ....+.+. +-.-..+++..+.|++.+...+...+ .++ +..+.+|++|.+.. -
T Consensus 108 --y~---~~~---------~~h~~eL~~~~p~r~~vllq~gDEvLDyr~a~~~y-----~~~y~~~v~~GGdH~f~~--f 166 (180)
T PRK04940 108 --YA---DIA---------TKCVTNFREKNRDRCLVILSRNDEVLDSQRTAEEL-----HPYYEIVWDEEQTHKFKN--I 166 (180)
T ss_pred --hh---hhh---------HHHHHHhhhcCcccEEEEEeCCCcccCHHHHHHHh-----ccCceEEEECCCCCCCCC--H
Confidence 00 000 00001111 12234699999999999987765544 334 68888998887652 2
Q ss_pred hhHHHHHHHHHHHHHh
Q 018984 324 DDMIIRVFADIISWLD 339 (348)
Q Consensus 324 ~~~~~~~~~~i~~fl~ 339 (348)
++ ....|.+|++
T Consensus 167 e~----~l~~I~~F~~ 178 (180)
T PRK04940 167 SP----HLQRIKAFKT 178 (180)
T ss_pred HH----HHHHHHHHHh
Confidence 33 7888999985
No 143
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.15 E-value=1.9e-08 Score=85.58 Aligned_cols=131 Identities=14% Similarity=0.047 Sum_probs=78.5
Q ss_pred EecCCCceeEEEEeccCC--CCCceeEEEEecCCCcccccchhHHHHHHhCC----ceEEeecCCCCc-cCCCCCCCCCC
Q 018984 62 EVNSRGVEIFCKSWLPET--SQPKGLVCYCHGYGDTCTFFFEGTARKLASSG----YGVFAMDYPGFG-LSAGLHGYIPS 134 (348)
Q Consensus 62 ~~~~~g~~l~~~~~~p~~--~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g----~~vi~~D~~G~G-~s~~~~~~~~~ 134 (348)
....-|.+..+.+|.|++ ..+.|+|+++||...............|...| ..++.+|..+.. ++........-
T Consensus 186 ~S~~Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f 265 (411)
T PRK10439 186 KSERLGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADF 265 (411)
T ss_pred EccccCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHH
Confidence 344456678888898864 24579999999965322211233445555555 335777753211 11111100001
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccc
Q 018984 135 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 193 (348)
Q Consensus 135 ~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 193 (348)
...+++++.-.++..-. ...+..+.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 266 ~~~l~~eLlP~I~~~y~-~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 266 WLAVQQELLPQVRAIAP-FSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHHhCC-CCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 22234555555544311 11233468999999999999999999999999999999864
No 144
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.11 E-value=9.2e-10 Score=86.85 Aligned_cols=128 Identities=23% Similarity=0.246 Sum_probs=86.9
Q ss_pred eeEEecCCCceeEEEEe--cc-CCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCCh
Q 018984 59 ESYEVNSRGVEIFCKSW--LP-ETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSF 135 (348)
Q Consensus 59 ~~~~~~~~g~~l~~~~~--~p-~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~ 135 (348)
+-.+.+.||.+|-.... .| ..+++...||++-|..+.-+. .++..=++.||.|+.+++||++.|.+.+....+.
T Consensus 216 R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv---G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~ 292 (517)
T KOG1553|consen 216 RLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV---GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTL 292 (517)
T ss_pred EEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe---eeecChHHhCceeeccCCCCccccCCCCCcccch
Confidence 34556677766654332 12 223446788898887665432 2333333679999999999999998765443232
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
..+..+++......++....|++.|||.||..+..+|..||+ |+++||-+.+.+
T Consensus 293 ----nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 293 ----NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred ----HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhh
Confidence 233334444444445566689999999999999999999998 999999887654
No 145
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.10 E-value=1.8e-09 Score=79.15 Aligned_cols=142 Identities=22% Similarity=0.320 Sum_probs=90.5
Q ss_pred CCCccceeeEEecCCCceeEEEEeccCC---CCCceeEEEEecCCCcccccch--hHHHHHHhCCceEEeecCCCCccCC
Q 018984 52 CDGLKTEESYEVNSRGVEIFCKSWLPET---SQPKGLVCYCHGYGDTCTFFFE--GTARKLASSGYGVFAMDYPGFGLSA 126 (348)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~--~~~~~l~~~g~~vi~~D~~G~G~s~ 126 (348)
+.|...........-++.+.+-+|.|+. +++-|++.++.|+.++.+.+.. .+.+.-+++|+.|+.+|-.-.|..-
T Consensus 10 f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v 89 (283)
T KOG3101|consen 10 FGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEV 89 (283)
T ss_pred ccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCcccc
Confidence 3443344444455567788888998864 3446899999999988765322 1233445679999999965444211
Q ss_pred C--CCC-------------------CCCC-hhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcc
Q 018984 127 G--LHG-------------------YIPS-FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWS 184 (348)
Q Consensus 127 ~--~~~-------------------~~~~-~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~ 184 (348)
. +.. ..+. ++-.++++.+++..- ...++..++.|.||||||.-|+..+.+.|.+.+
T Consensus 90 ~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~--~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kyk 167 (283)
T KOG3101|consen 90 AGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSA--NVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYK 167 (283)
T ss_pred CCCcccccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccc--cccccchhcceeccccCCCceEEEEEcCccccc
Confidence 0 000 0011 122344444444432 223445579999999999999999999999999
Q ss_pred eEEEeCccccc
Q 018984 185 GAILVAPMCKI 195 (348)
Q Consensus 185 ~~vl~~~~~~~ 195 (348)
++-..+|...+
T Consensus 168 SvSAFAPI~NP 178 (283)
T KOG3101|consen 168 SVSAFAPICNP 178 (283)
T ss_pred ceeccccccCc
Confidence 98888876643
No 146
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.10 E-value=9.3e-09 Score=80.59 Aligned_cols=101 Identities=23% Similarity=0.306 Sum_probs=82.8
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEE
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLF 163 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~ 163 (348)
|++.++||.+|.... |..++..|... ..|+.++.+|.+.-... ..+++++++...+.|..+..+ .+++|+
T Consensus 1 ~pLF~fhp~~G~~~~-~~~L~~~l~~~-~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~QP~-----GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVLA-YAPLAAALGPL-LPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQPE-----GPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHHH-HHHHHHHhccC-ceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhCCC-----CCEEEE
Confidence 469999999999776 88999999766 99999999999853221 248999998888888877544 389999
Q ss_pred EeChhHHHHHHHHHh---CCCCcceEEEeCcccc
Q 018984 164 GQSLGGAVALKVHLK---QPNAWSGAILVAPMCK 194 (348)
Q Consensus 164 GhS~Gg~~a~~~a~~---~p~~v~~~vl~~~~~~ 194 (348)
|||+||.+|..+|.+ ..+.|..++++++...
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999999876 3456999999998776
No 147
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.08 E-value=4.4e-09 Score=89.10 Aligned_cols=188 Identities=16% Similarity=0.132 Sum_probs=123.3
Q ss_pred ceeEEEEecCC--CcccccchhHHHHHHhCC--ceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHH--HHHcCCCCC
Q 018984 83 KGLVCYCHGYG--DTCTFFFEGTARKLASSG--YGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYS--NIKEYPEFR 156 (348)
Q Consensus 83 ~~~vv~~HG~~--~~~~~~~~~~~~~l~~~g--~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~--~l~~~~~~~ 156 (348)
.|.++++||.+ .....++..+-..|...| ..+..+|++.--. + .++...++.+..+.+ .+.....++
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~ig--G-----~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIG--G-----ANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCC--C-----cchHHHHHHHHHHhhhhhhhhhccCC
Confidence 68899999987 122222334444454433 4456677663211 0 266677777777777 344445678
Q ss_pred CCCeEEEEeChhHHHHHHHHHhCC-CCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhch
Q 018984 157 TLPSFLFGQSLGGAVALKVHLKQP-NAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL 235 (348)
Q Consensus 157 ~~~v~l~GhS~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (348)
..+|+|+|.|||+.++.+.....- ..|+++|+++-+........ .
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr-------------------------g--------- 294 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR-------------------------G--------- 294 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc-------------------------C---------
Confidence 889999999999888887766543 34889998875543222100 0
Q ss_pred hhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCC
Q 018984 236 KNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAF 315 (348)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 315 (348)
...+.+-.++.|+|++.|.+|..++++..+.+.+++. ...+++++.+++
T Consensus 295 ------------------------------irDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq-A~~elhVI~~ad 343 (784)
T KOG3253|consen 295 ------------------------------IRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ-AEVELHVIGGAD 343 (784)
T ss_pred ------------------------------CcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh-ccceEEEecCCC
Confidence 0113455678999999999999999999999999886 457899999999
Q ss_pred cccccCC---------ChhHHHHHHHHHHHHHhhhc
Q 018984 316 HSLLEGE---------PDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 316 H~~~~~~---------~~~~~~~~~~~i~~fl~~~~ 342 (348)
|.+-... ..++-..+.++|.+|+...+
T Consensus 344 hsmaipk~k~esegltqseVd~~i~~aI~efvt~~l 379 (784)
T KOG3253|consen 344 HSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTIAL 379 (784)
T ss_pred ccccCCccccccccccHHHHHHHHHHHHHHHHHHhh
Confidence 9875433 12233345555555555443
No 148
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.06 E-value=1.8e-10 Score=94.63 Aligned_cols=115 Identities=15% Similarity=0.107 Sum_probs=71.4
Q ss_pred CCceeEEEEecCCCcc--cccchhHHHHHHh---CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCC
Q 018984 81 QPKGLVCYCHGYGDTC--TFFFEGTARKLAS---SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEF 155 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~--~~~~~~~~~~l~~---~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 155 (348)
..+|++|++|||.++. ..|...+.+.+.+ .++.|+++|+...-...... .........+.+..+|..|....+.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~-a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ-AVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH-HHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc-hhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 3489999999998776 3345556665544 47999999996332110000 0012334455666777777644445
Q ss_pred CCCCeEEEEeChhHHHHHHHHHhCCC--CcceEEEeCcccccc
Q 018984 156 RTLPSFLFGQSLGGAVALKVHLKQPN--AWSGAILVAPMCKIA 196 (348)
Q Consensus 156 ~~~~v~l~GhS~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~ 196 (348)
+..+++|||||+||++|-.++..... +|..++.++|+....
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 56689999999999999999988877 899999999987644
No 149
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.05 E-value=1e-08 Score=75.94 Aligned_cols=108 Identities=20% Similarity=0.191 Sum_probs=80.4
Q ss_pred ceeEEEEecCCCccc--ccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCe
Q 018984 83 KGLVCYCHGYGDTCT--FFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPS 160 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 160 (348)
+-.|||+.|++..-- .|...+..+|.+.+|.++-+.++.+-.-.+ ..++.+-++|+..+++++.... +.. .|
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~G----t~slk~D~edl~~l~~Hi~~~~-fSt-~v 109 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYG----TFSLKDDVEDLKCLLEHIQLCG-FST-DV 109 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccc----cccccccHHHHHHHHHHhhccC-ccc-ce
Confidence 567999999875532 245678888988999999998774321111 1377788999999999887652 222 79
Q ss_pred EEEEeChhHHHHHHHHHh--CCCCcceEEEeCcccccc
Q 018984 161 FLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCKIA 196 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~ 196 (348)
+|+|||.|+.-.+.+..+ .+..+.+.|+.+|+.+..
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999999998888733 456788999999988754
No 150
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.03 E-value=2.3e-08 Score=86.70 Aligned_cols=137 Identities=17% Similarity=0.241 Sum_probs=87.8
Q ss_pred ceeeEEecC--CCceeEEEEeccCCC-CCceeEEEEecCCCcccccchhHH-------------------HHHHhCCceE
Q 018984 57 TEESYEVNS--RGVEIFCKSWLPETS-QPKGLVCYCHGYGDTCTFFFEGTA-------------------RKLASSGYGV 114 (348)
Q Consensus 57 ~~~~~~~~~--~g~~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~~~~~~-------------------~~l~~~g~~v 114 (348)
....++... .+..++|+.+...+. ...|+||++.|++|+++. +..+. ..+.+. .++
T Consensus 11 ~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~ 88 (415)
T PF00450_consen 11 QYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANL 88 (415)
T ss_dssp EEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEE
T ss_pred EEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccccccccc-cce
Confidence 344444444 678999998876542 348999999999988765 32211 112222 689
Q ss_pred EeecCC-CCccCCCCCC--CCCChhHHHHHHHHHHHHHHcC-CCCCCCCeEEEEeChhHHHHHHHHHh----C------C
Q 018984 115 FAMDYP-GFGLSAGLHG--YIPSFDRLVDDVIEHYSNIKEY-PEFRTLPSFLFGQSLGGAVALKVHLK----Q------P 180 (348)
Q Consensus 115 i~~D~~-G~G~s~~~~~--~~~~~~~~~~d~~~~l~~l~~~-~~~~~~~v~l~GhS~Gg~~a~~~a~~----~------p 180 (348)
+-+|.| |.|.|..... ...+.++.++++..+|+..-.. +.+...+++|.|-|+||..+-.+|.. . +
T Consensus 89 l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~ 168 (415)
T PF00450_consen 89 LFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPK 168 (415)
T ss_dssp EEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STT
T ss_pred EEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccc
Confidence 999966 8998865433 3347788889998888776443 34556689999999999887666542 2 3
Q ss_pred CCcceEEEeCccccc
Q 018984 181 NAWSGAILVAPMCKI 195 (348)
Q Consensus 181 ~~v~~~vl~~~~~~~ 195 (348)
-.++|+++.++..+.
T Consensus 169 inLkGi~IGng~~dp 183 (415)
T PF00450_consen 169 INLKGIAIGNGWIDP 183 (415)
T ss_dssp SEEEEEEEESE-SBH
T ss_pred cccccceecCccccc
Confidence 358999999998774
No 151
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.01 E-value=1.7e-07 Score=76.79 Aligned_cols=207 Identities=14% Similarity=0.241 Sum_probs=125.4
Q ss_pred EEecCCCceeEEEEeccC-CCCCceeEEEEecCCCcccc--cchhHHHHHHhCCceEEeecCCCC--ccCC---------
Q 018984 61 YEVNSRGVEIFCKSWLPE-TSQPKGLVCYCHGYGDTCTF--FFEGTARKLASSGYGVFAMDYPGF--GLSA--------- 126 (348)
Q Consensus 61 ~~~~~~g~~l~~~~~~p~-~~~~~~~vv~~HG~~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~--G~s~--------- 126 (348)
.....++.+. ...|.|. .+....+||++||.+.+... ....+-..|.+.||.++++.+|.- ....
T Consensus 65 ~~L~~~~~~f-laL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~ 143 (310)
T PF12048_consen 65 QWLQAGEERF-LALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV 143 (310)
T ss_pred EEeecCCEEE-EEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence 3334444333 3445554 34457899999999988652 234566777789999999988871 1000
Q ss_pred -CCC--C-CC-----------------CChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC-Ccc
Q 018984 127 -GLH--G-YI-----------------PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN-AWS 184 (348)
Q Consensus 127 -~~~--~-~~-----------------~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~-~v~ 184 (348)
... . .. ...+.+..-+.+++..+..+ ++.+++|+||+.|+..++.+....+. .++
T Consensus 144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~d 220 (310)
T PF12048_consen 144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPD 220 (310)
T ss_pred CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccC
Confidence 000 0 00 01123344556666666554 33359999999999999999988764 589
Q ss_pred eEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhh
Q 018984 185 GAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTT 264 (348)
Q Consensus 185 ~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (348)
++|++++....... .
T Consensus 221 aLV~I~a~~p~~~~-----------------------------------------------------------------n 235 (310)
T PF12048_consen 221 ALVLINAYWPQPDR-----------------------------------------------------------------N 235 (310)
T ss_pred eEEEEeCCCCcchh-----------------------------------------------------------------h
Confidence 99999986532110 0
Q ss_pred HHHHHhccCCCCcEEEEecCCCCcCCHHHH--HHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 265 EGIERRLEKVSLPLLILHGENDTVTDPSVS--KALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 265 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
..+.+.+.++++|||=|++.+...+-.... +...++....+.+-+.+.+..|..... ...+.+.|..||+.+
T Consensus 236 ~~l~~~la~l~iPvLDi~~~~~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~-----~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 236 PALAEQLAQLKIPVLDIYSADNPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGW-----QEQLLRRIRGWLKRH 309 (310)
T ss_pred hhHHHHhhccCCCEEEEecCCChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhhH-----HHHHHHHHHHHHHhh
Confidence 133456778999999999887332221111 112222223455666677665544321 223899999999875
No 152
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.99 E-value=7.8e-10 Score=84.70 Aligned_cols=92 Identities=20% Similarity=0.221 Sum_probs=57.3
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCce---EEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCe
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYG---VFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPS 160 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 160 (348)
.+|||+||.+++...-|..+++.|.++||. ++++++-........... ....+.+.++.++++.+.... .. +|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~~T--Ga-kV 77 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLAYT--GA-KV 77 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHHHH--T---E
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHHhh--CC-EE
Confidence 369999999985554589999999999999 799998544432211111 012344578888888876542 23 89
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 018984 161 FLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~ 179 (348)
-||||||||.++..+....
T Consensus 78 DIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEETCHHHHHHHHHHHC
T ss_pred EEEEcCCcCHHHHHHHHHc
Confidence 9999999999998887644
No 153
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.99 E-value=2.2e-09 Score=91.23 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=73.5
Q ss_pred ccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHH
Q 018984 98 FFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 98 ~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~ 177 (348)
.+|..+++.|.+.||.+ ..|++|+|.+.+.. ...++..+++.++++.+... .++.+++|+||||||.++..++.
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHHH
Confidence 35899999999999755 89999999987652 24566777888888877654 23458999999999999999998
Q ss_pred hCCC----CcceEEEeCcccccc
Q 018984 178 KQPN----AWSGAILVAPMCKIA 196 (348)
Q Consensus 178 ~~p~----~v~~~vl~~~~~~~~ 196 (348)
.+|+ .|+.+|.++++....
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HCCHhHHhHhccEEEECCCCCCC
Confidence 8886 378999998765543
No 154
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.95 E-value=1.1e-08 Score=80.18 Aligned_cols=112 Identities=17% Similarity=0.209 Sum_probs=73.7
Q ss_pred CCceeEEEEecCCCcccccchhHHHHHHhCCc--eEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCC
Q 018984 81 QPKGLVCYCHGYGDTCTFFFEGTARKLASSGY--GVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTL 158 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~--~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 158 (348)
+.+.++||+||+..+.+.-....++....-++ .++.+.||+.|.-..-.....+.......+..+|+.+... .+..
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~--~~~~ 93 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA--PGIK 93 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc--cCCc
Confidence 34779999999987744322233332222233 7999999988763221111123445567788888887765 2355
Q ss_pred CeEEEEeChhHHHHHHHHHh----CC-----CCcceEEEeCcccc
Q 018984 159 PSFLFGQSLGGAVALKVHLK----QP-----NAWSGAILVAPMCK 194 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~----~p-----~~v~~~vl~~~~~~ 194 (348)
+|+|++||||+.+.+..... .+ .++..+|+++|-.+
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 89999999999999887643 21 36889999998764
No 155
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.94 E-value=4.5e-08 Score=84.46 Aligned_cols=230 Identities=16% Similarity=0.113 Sum_probs=135.3
Q ss_pred ceeeEEecCCCceeEEEEeccCC---CCCceeEEEEecCCCc-ccccchhHHHHHHhCCceEEeecCCCCccCCCC----
Q 018984 57 TEESYEVNSRGVEIFCKSWLPET---SQPKGLVCYCHGYGDT-CTFFFEGTARKLASSGYGVFAMDYPGFGLSAGL---- 128 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~vv~~HG~~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~---- 128 (348)
.+.......||+++...+..... ..+.|++|+.-|.-+. ....|....-.|.++|+-....-.||=|+-...
T Consensus 419 s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~ 498 (682)
T COG1770 419 SRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYED 498 (682)
T ss_pred EEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHh
Confidence 33444455889888776554322 3347788887775333 222344444456689998878888887754322
Q ss_pred ---CCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHH
Q 018984 129 ---HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLV 205 (348)
Q Consensus 129 ---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 205 (348)
.....++. |..+..++|..+.-.....++++|-|.||++.-..+.+.|+.++++|+-.|+.+.-..+..+..
T Consensus 499 GK~l~K~NTf~----DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~sl- 573 (682)
T COG1770 499 GKLLNKKNTFT----DFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSL- 573 (682)
T ss_pred hhhhhccccHH----HHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCC-
Confidence 11223444 5556666666554444558999999999999999999999999999999998876543321110
Q ss_pred HHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCC
Q 018984 206 KQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGEN 285 (348)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~ 285 (348)
+ ... .....|.++. -......+..+..+.+.-.+--.|+|++.|..
T Consensus 574 -----------P----LT~------------------~E~~EWGNP~-d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~ 619 (682)
T COG1770 574 -----------P----LTV------------------TEWDEWGNPL-DPEYYDYIKSYSPYDNVEAQPYPAILVTTGLN 619 (682)
T ss_pred -----------C----CCc------------------cchhhhCCcC-CHHHHHHHhhcCchhccccCCCCceEEEcccc
Confidence 0 000 0011111111 23333333333333333334456899999999
Q ss_pred CCcCCHHHHHHHHHHhcC--CCc---eEEEcCCCCcccccCCChh
Q 018984 286 DTVTDPSVSKALYEKASS--KDK---KCILYKDAFHSLLEGEPDD 325 (348)
Q Consensus 286 D~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~gH~~~~~~~~~ 325 (348)
|+.|..-...++..++.. .+. -+.+=-++||.-.-.+.+.
T Consensus 620 D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~ 664 (682)
T COG1770 620 DPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQR 664 (682)
T ss_pred CCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHH
Confidence 998876555555555532 122 2222146899877666553
No 156
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.93 E-value=2.9e-07 Score=77.47 Aligned_cols=89 Identities=12% Similarity=0.114 Sum_probs=67.7
Q ss_pred hhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCC
Q 018984 101 EGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 101 ~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p 180 (348)
..+.-.| +.|+.|+.+.+.- .+.+ ..++.+.......+++.+.....-.. +.+|+|.|.||+.++.+|+.+|
T Consensus 91 SevG~AL-~~GHPvYFV~F~p----~P~p--gQTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 91 SEVGVAL-RAGHPVYFVGFFP----EPEP--GQTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred cHHHHHH-HcCCCeEEEEecC----CCCC--CCcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCc
Confidence 3455566 5699998887652 1222 24888888888888888876532222 8899999999999999999999
Q ss_pred CCcceEEEeCccccccc
Q 018984 181 NAWSGAILVAPMCKIAD 197 (348)
Q Consensus 181 ~~v~~~vl~~~~~~~~~ 197 (348)
+.+.-+|+-+++.+...
T Consensus 163 d~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 163 DLVGPLVLAGAPLSYWA 179 (581)
T ss_pred CccCceeecCCCccccc
Confidence 99999999888777655
No 157
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.93 E-value=4.7e-08 Score=83.31 Aligned_cols=251 Identities=16% Similarity=0.121 Sum_probs=150.7
Q ss_pred CCCccceeeEEecCCCceeEEEEeccC-CCCCceeEEEEecCCCccc-ccchhHHHHHHhCCceEEeecCCCCccCCCCC
Q 018984 52 CDGLKTEESYEVNSRGVEIFCKSWLPE-TSQPKGLVCYCHGYGDTCT-FFFEGTARKLASSGYGVFAMDYPGFGLSAGLH 129 (348)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~l~~~~~~p~-~~~~~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~ 129 (348)
..++..++.+.++.||++|.|.+.... ...+.|++|+--|+..-+. -.|......+.++|...+..+.||=|+=....
T Consensus 389 a~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~W 468 (648)
T COG1505 389 ADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEW 468 (648)
T ss_pred ccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHH
Confidence 445668888999999999999887511 1124677776665532221 12445557778999999999999987653221
Q ss_pred ---CCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHH
Q 018984 130 ---GYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVK 206 (348)
Q Consensus 130 ---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 206 (348)
....+-+...+|..++.+.|..+.--...++.+.|-|-||.+.-....++|+.+.++|+-.|..+.-.-
T Consensus 469 H~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRY-------- 540 (648)
T COG1505 469 HQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRY-------- 540 (648)
T ss_pred HHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhh--------
Confidence 111133345678888888887764444457899999999999998899999998888887776542210
Q ss_pred HHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhcc-CCCCcEEEEecCC
Q 018984 207 QILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLE-KVSLPLLILHGEN 285 (348)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~P~l~i~g~~ 285 (348)
..+.....+.. .|. ++........+..+..+.+.-. ..=.|+||-.+..
T Consensus 541 ------------h~l~aG~sW~~-----------------EYG-~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~ 590 (648)
T COG1505 541 ------------HLLTAGSSWIA-----------------EYG-NPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLH 590 (648)
T ss_pred ------------cccccchhhHh-----------------hcC-CCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccc
Confidence 00000000000 000 1111111112222212211111 2234899999999
Q ss_pred CCcCCHHHHHHHHHHhcCCCce--EEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 286 DTVTDPSVSKALYEKASSKDKK--CILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 286 D~~~~~~~~~~~~~~~~~~~~~--~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
|.-|.+.+++.++.++...+.. +.+=.++||.---+..+ ...-...+..||.+.+
T Consensus 591 DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~--~A~~~a~~~afl~r~L 647 (648)
T COG1505 591 DDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAE--IARELADLLAFLLRTL 647 (648)
T ss_pred cccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHH--HHHHHHHHHHHHHHhh
Confidence 9988889999998888633333 33335689987643332 1224455667777654
No 158
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.91 E-value=8.7e-08 Score=72.76 Aligned_cols=204 Identities=19% Similarity=0.192 Sum_probs=124.1
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCC-----ceEEeecCCCC----ccCCC----C------CCCCCChhHHHHHHHH
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSG-----YGVFAMDYPGF----GLSAG----L------HGYIPSFDRLVDDVIE 144 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g-----~~vi~~D~~G~----G~s~~----~------~~~~~~~~~~~~d~~~ 144 (348)
-+.||+||.+++... ...++..|...+ --++.+|--|. |.-++ | .....+..++...+..
T Consensus 46 iPTIfIhGsgG~asS-~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTASS-LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChhH-HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 358999999999887 788888887653 23556665552 11111 1 1112366777899999
Q ss_pred HHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC-----CcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCC
Q 018984 145 HYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKH 219 (348)
Q Consensus 145 ~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (348)
++.+|..+.+++ ++-++||||||.-...++..+.. .+..+|.+++++.. ....+....
T Consensus 125 ~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~-~~l~~de~v-------------- 187 (288)
T COG4814 125 AMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNV-GNLVPDETV-------------- 187 (288)
T ss_pred HHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccc-cccCCCcch--------------
Confidence 999999885544 79999999999999999876532 38899999877651 111110000
Q ss_pred cccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHH-HHhccC--CCCcEEEEecCCC------CcCC
Q 018984 220 KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGI-ERRLEK--VSLPLLILHGEND------TVTD 290 (348)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--i~~P~l~i~g~~D------~~~~ 290 (348)
.+..... ....... ..++ ...... -+.-+|.|.|+-| ..||
T Consensus 188 --------~~v~~~~----------------~~~~~t~------y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp 237 (288)
T COG4814 188 --------TDVLKDG----------------PGLIKTP------YYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVP 237 (288)
T ss_pred --------heeeccC----------------ccccCcH------HHHHHHhcceeCCCCcEEEEEecccccCCcCCCcee
Confidence 0000000 0000000 0011 011122 2567999999864 5778
Q ss_pred HHHHHHHHHHhcCCCceEE--Ec--CCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 291 PSVSKALYEKASSKDKKCI--LY--KDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~--~~--~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
...+......+.+....++ ++ +++-|.-+.|+|. +...+..||-+
T Consensus 238 ~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~-----v~~yv~~FLw~ 286 (288)
T COG4814 238 WASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPT-----VAKYVKNFLWE 286 (288)
T ss_pred chHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChh-----HHHHHHHHhhc
Confidence 7777777777754333333 23 5678988888876 78888888854
No 159
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.90 E-value=1.7e-08 Score=81.11 Aligned_cols=129 Identities=16% Similarity=0.083 Sum_probs=75.0
Q ss_pred CceeEEEEeccCC---CCCceeEEEEecCCCccccc-chhHHHHHHhCC----ceEEeecCCCCccCCC----------C
Q 018984 67 GVEIFCKSWLPET---SQPKGLVCYCHGYGDTCTFF-FEGTARKLASSG----YGVFAMDYPGFGLSAG----------L 128 (348)
Q Consensus 67 g~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~-~~~~~~~l~~~g----~~vi~~D~~G~G~s~~----------~ 128 (348)
|....+.+|.|++ .++.|+|+++||.......+ .......+...| ..+++++..+.+.... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 5677888888876 45589999999962111110 112233333332 4456666655541110 0
Q ss_pred CCCCCChhHHHHHH-HHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccc
Q 018984 129 HGYIPSFDRLVDDV-IEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 195 (348)
Q Consensus 129 ~~~~~~~~~~~~d~-~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 195 (348)
......-..+.+.+ .+++.++..+......+..|+|+||||..|+.++.++|+.+.+++.++|....
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 00111112222222 23344444333333334899999999999999999999999999999987643
No 160
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.81 E-value=1.6e-07 Score=73.33 Aligned_cols=85 Identities=27% Similarity=0.308 Sum_probs=61.9
Q ss_pred chhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh-
Q 018984 100 FEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK- 178 (348)
Q Consensus 100 ~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~- 178 (348)
|..+...|.. ++.++++|.+|++.+.... .+++.+++.+...+.... +..+++++|||+||.++..++.+
T Consensus 15 ~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~-----~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 15 YARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAA-----GGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred HHHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhc-----CCCCeEEEEECHHHHHHHHHHHHH
Confidence 7788888854 5899999999998664432 256666665555444322 23379999999999999988875
Q ss_pred --CCCCcceEEEeCccc
Q 018984 179 --QPNAWSGAILVAPMC 193 (348)
Q Consensus 179 --~p~~v~~~vl~~~~~ 193 (348)
.+..+.+++++++..
T Consensus 86 ~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 86 EARGIPPAAVVLLDTYP 102 (212)
T ss_pred HhCCCCCcEEEEEccCC
Confidence 456689998887644
No 161
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.81 E-value=1.2e-07 Score=81.42 Aligned_cols=148 Identities=16% Similarity=0.114 Sum_probs=99.6
Q ss_pred ccccCCCccceeeEEecCCCceeEEEEeccCC---CCCceeEEEEecCCCc-ccccchhHHHHHHhCCceEEeecCCCCc
Q 018984 48 LKATCDGLKTEESYEVNSRGVEIFCKSWLPET---SQPKGLVCYCHGYGDT-CTFFFEGTARKLASSGYGVFAMDYPGFG 123 (348)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~vv~~HG~~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~G 123 (348)
+.........++..+.+.||..+.-.+..... .+++|.+|+.+|.-+- ....|+.--..|.+.|+.....|.||=|
T Consensus 432 pg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGG 511 (712)
T KOG2237|consen 432 PGFDASDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGG 511 (712)
T ss_pred CcccccceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCc
Confidence 33344455677888899999887765554221 2347888877776432 2222443333455689988899999977
Q ss_pred cCCCC---CCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccc
Q 018984 124 LSAGL---HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 195 (348)
Q Consensus 124 ~s~~~---~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 195 (348)
+-... .+....-....+|..+..++|..+.-....+..+.|.|.||.++..+..++|+.+.++|+-.|+.+.
T Consensus 512 e~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 512 EYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred ccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 54322 1111112223566777777777665455568999999999999999999999999999998888764
No 162
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.78 E-value=5.6e-07 Score=70.08 Aligned_cols=93 Identities=17% Similarity=0.094 Sum_probs=52.8
Q ss_pred CceeEEEEecCCCcccccchhHHHHHHhC--CceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCC
Q 018984 82 PKGLVCYCHGYGDTCTFFFEGTARKLASS--GYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLP 159 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 159 (348)
+...|||+||+.++... |..+...+... .+.-..+...++..... ....+++...+.+.+-|............+
T Consensus 3 ~~hLvV~vHGL~G~~~d-~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~--~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPAD-MRYLKNHLEKIPEDLPNARIVVLGYSNNEF--KTFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHHH-HHHHHHHHHHhhhhcchhhhhhhccccccc--ccchhhHHHHHHHHHHHHHhcccccccccc
Confidence 45689999999999776 67676666551 12211222222211111 111255655555544444333332222348
Q ss_pred eEEEEeChhHHHHHHHHH
Q 018984 160 SFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 160 v~l~GhS~Gg~~a~~~a~ 177 (348)
+.+|||||||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999876554
No 163
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.75 E-value=2.2e-07 Score=76.70 Aligned_cols=244 Identities=25% Similarity=0.220 Sum_probs=126.7
Q ss_pred ceeEEEEeccCCC---CCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCC----------CCC-
Q 018984 68 VEIFCKSWLPETS---QPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHG----------YIP- 133 (348)
Q Consensus 68 ~~l~~~~~~p~~~---~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~----------~~~- 133 (348)
..+....+.|.+. ...|.+++.||+++.... .......++..++.++..+...+|.+..... ...
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 109 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQ-SLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSA 109 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccC-cchHHHHhhhceeEEeeeccccccccccccccccCccccccccch
Confidence 5566666766654 357899999999988876 3336777878888877777533332221100 000
Q ss_pred ------ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC--CcceEEEeCccccccccCCChHHH
Q 018984 134 ------SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN--AWSGAILVAPMCKIADDMVPPFLV 205 (348)
Q Consensus 134 ------~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~ 205 (348)
.......+...... ...+....|+++|+..+..++...+. ....+++.+...............
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~ 181 (299)
T COG1073 110 AVLLLLSEGVLDKDYRLLGA--------SLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGAN 181 (299)
T ss_pred hheeeeccccccHHHHHHhh--------hcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccc
Confidence 00000111111111 11378999999999999988887763 223333333222211111000000
Q ss_pred -HHHHHHHHhhcCCCcccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCC-CcEEEEec
Q 018984 206 -KQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVS-LPLLILHG 283 (348)
Q Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g 283 (348)
................... ......+... ... ...+. ..+....+.++. +|+|+++|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~-~~~--~~~~~-~~d~~~~~~~i~~~P~l~~~G 240 (299)
T COG1073 182 PELARELIDYLITPGGFAPL-----------------PAPEAPLDTL-PLR--AVLLL-LLDPFDDAEKISPRPVLLVHG 240 (299)
T ss_pred hHHHHhhhhhhccCCCCCCC-----------------Cccccccccc-ccc--hhhhc-cCcchhhHhhcCCcceEEEec
Confidence 0000000000000000000 0000000000 000 00000 112223444555 79999999
Q ss_pred CCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 284 ENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 284 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
.+|..+|......+++.......+...+++++|......+. ...+.++.+.+|+.+++
T Consensus 241 ~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 241 ERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPP-AVEQALDKLAEFLERHL 298 (299)
T ss_pred CCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccH-HHHHHHHHHHHHHHHhc
Confidence 99999999999999988854346777888899987764333 12348899999998875
No 164
>PLN02606 palmitoyl-protein thioesterase
Probab=98.74 E-value=1.4e-06 Score=69.27 Aligned_cols=102 Identities=16% Similarity=0.112 Sum_probs=64.6
Q ss_pred eeEEEEecCC--CcccccchhHHHHHHh-CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCe
Q 018984 84 GLVCYCHGYG--DTCTFFFEGTARKLAS-SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPS 160 (348)
Q Consensus 84 ~~vv~~HG~~--~~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 160 (348)
.+||+.||.| ++... ...+.+.+.. .|+.+..+. .|-+. .......+.+.++.+.+.+.. .....+ -+
T Consensus 27 ~PvViwHGlgD~~~~~~-~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~---~~~L~~-G~ 97 (306)
T PLN02606 27 VPFVLFHGFGGECSNGK-VSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQ---MKELSE-GY 97 (306)
T ss_pred CCEEEECCCCcccCCch-HHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhc---chhhcC-ce
Confidence 4599999999 33333 5677777742 366665555 23221 112212444444444444443 322232 48
Q ss_pred EEEEeChhHHHHHHHHHhCCC--CcceEEEeCcccc
Q 018984 161 FLFGQSLGGAVALKVHLKQPN--AWSGAILVAPMCK 194 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 194 (348)
.++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999999976 5999999986544
No 165
>COG3150 Predicted esterase [General function prediction only]
Probab=98.72 E-value=8.5e-07 Score=62.93 Aligned_cols=92 Identities=13% Similarity=0.170 Sum_probs=61.2
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEe
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQ 165 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~Gh 165 (348)
||++||+.++....-..+...+ +..|.|-.+.+..... .+....++.+..++...+.+ ...|+|-
T Consensus 2 ilYlHGFnSSP~shka~l~~q~-------~~~~~~~i~y~~p~l~--h~p~~a~~ele~~i~~~~~~------~p~ivGs 66 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQF-------IDEDVRDIEYSTPHLP--HDPQQALKELEKAVQELGDE------SPLIVGS 66 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHH-------HhccccceeeecCCCC--CCHHHHHHHHHHHHHHcCCC------CceEEee
Confidence 8999999987766222222222 2223333333332222 37888888999998887655 6899999
Q ss_pred ChhHHHHHHHHHhCCCCcceEEEeCccccc
Q 018984 166 SLGGAVALKVHLKQPNAWSGAILVAPMCKI 195 (348)
Q Consensus 166 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 195 (348)
|+||+.|.+++.++. ++. |+++|...+
T Consensus 67 sLGGY~At~l~~~~G--ira-v~~NPav~P 93 (191)
T COG3150 67 SLGGYYATWLGFLCG--IRA-VVFNPAVRP 93 (191)
T ss_pred cchHHHHHHHHHHhC--Chh-hhcCCCcCc
Confidence 999999999999876 444 456666543
No 166
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.66 E-value=1.2e-07 Score=84.12 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=75.9
Q ss_pred eeEEEEeccCC---CCCceeEEEEecCCCcccccchhHHHHHHhC-C-ceEEeecCC-CC---ccCCCCCCCCCChhHHH
Q 018984 69 EIFCKSWLPET---SQPKGLVCYCHGYGDTCTFFFEGTARKLASS-G-YGVFAMDYP-GF---GLSAGLHGYIPSFDRLV 139 (348)
Q Consensus 69 ~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g-~~vi~~D~~-G~---G~s~~~~~~~~~~~~~~ 139 (348)
-|+..+|.|.. .+..|+||++||++.....-.......|+.. + +.|+.+++| |. ..+... . ..-..-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~--~~~n~g~ 154 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-E--LPGNYGL 154 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCC-C--CCcchhH
Confidence 36667777764 3457999999997532211001123444444 3 899999999 32 222211 1 1112225
Q ss_pred HHHHHHHHHHHcC---CCCCCCCeEEEEeChhHHHHHHHHHh--CCCCcceEEEeCcccc
Q 018984 140 DDVIEHYSNIKEY---PEFRTLPSFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCK 194 (348)
Q Consensus 140 ~d~~~~l~~l~~~---~~~~~~~v~l~GhS~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 194 (348)
.|...+++|+... .+.+..+|.|+|+|.||..+..++.. .+..++++|++++...
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 5666777776543 23455589999999999999887765 2446888888876543
No 167
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.66 E-value=6.5e-06 Score=65.56 Aligned_cols=226 Identities=13% Similarity=0.089 Sum_probs=113.1
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEe
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQ 165 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~Gh 165 (348)
+|++=||.+..........+...+.|+.++.+-.+........ ..+...++.+.+.+...... ...++++-.+
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~---~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDSQSA---SPPPILFHSF 74 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhhccC---CCCCEEEEEE
Confidence 5666677766544355555556668999998876533221111 13334444444444332221 1237999999
Q ss_pred ChhHHHHHHHHHh-----C-----CCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHhch
Q 018984 166 SLGGAVALKVHLK-----Q-----PNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL 235 (348)
Q Consensus 166 S~Gg~~a~~~a~~-----~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (348)
|.||...+..... . -.+++++|+-+++...... .....+...++.... .............
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 145 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYS--------SSARAFSAALPKSSP-RWFVPLWPLLQFL 145 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccc--------cHHHHHHHHcCccch-hhHHHHHHHHHHH
Confidence 9988776654331 1 1248999988876543221 011111111111100 0000000000000
Q ss_pred hhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcC--CCceEEEcCC
Q 018984 236 KNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKD 313 (348)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 313 (348)
.......... .......... .+...+ .......+|-|+++++.|.+++.+..++..+.... -+++...+++
T Consensus 146 ~~~~~~~~~~---~~~~~~~~~~--~~~~~~--~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~ 218 (240)
T PF05705_consen 146 LRLSIISYFI---FGYPDVQEYY--RRALND--FANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFED 218 (240)
T ss_pred HHHHHHHHHH---hcCCcHHHHH--HHHHhh--hhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCC
Confidence 0000000000 0000000000 000001 12235578999999999999999988888776643 3467778899
Q ss_pred CCccccc-CCChhHHHHHHHHHHHHH
Q 018984 314 AFHSLLE-GEPDDMIIRVFADIISWL 338 (348)
Q Consensus 314 ~gH~~~~-~~~~~~~~~~~~~i~~fl 338 (348)
+.|..+. .+|++ .++.+.+|+
T Consensus 219 S~HV~H~r~~p~~----Y~~~v~~fw 240 (240)
T PF05705_consen 219 SPHVAHLRKHPDR----YWRAVDEFW 240 (240)
T ss_pred CchhhhcccCHHH----HHHHHHhhC
Confidence 9998665 56777 777777663
No 168
>PLN02209 serine carboxypeptidase
Probab=98.63 E-value=2.9e-05 Score=66.72 Aligned_cols=129 Identities=19% Similarity=0.239 Sum_probs=81.2
Q ss_pred CCceeEEEEeccCCCC-CceeEEEEecCCCcccccchhHHH----------------HHHh------CCceEEeecCC-C
Q 018984 66 RGVEIFCKSWLPETSQ-PKGLVCYCHGYGDTCTFFFEGTAR----------------KLAS------SGYGVFAMDYP-G 121 (348)
Q Consensus 66 ~g~~l~~~~~~p~~~~-~~~~vv~~HG~~~~~~~~~~~~~~----------------~l~~------~g~~vi~~D~~-G 121 (348)
.+..++|..+...+.. ..|+|+++-|++|+++. +..+.+ .+.. +-.+++-+|.| |
T Consensus 50 ~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvG 128 (437)
T PLN02209 50 ENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVG 128 (437)
T ss_pred CCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCC
Confidence 3577888877655332 37999999999887754 221110 1111 12578999944 8
Q ss_pred CccCCCCCC-CCCChhHHHHHHHHHHHHHHcC-CCCCCCCeEEEEeChhHHHHHHHHHh----C------CCCcceEEEe
Q 018984 122 FGLSAGLHG-YIPSFDRLVDDVIEHYSNIKEY-PEFRTLPSFLFGQSLGGAVALKVHLK----Q------PNAWSGAILV 189 (348)
Q Consensus 122 ~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~-~~~~~~~v~l~GhS~Gg~~a~~~a~~----~------p~~v~~~vl~ 189 (348)
.|.|-.... ...+-++.++|+..++...-.. +.+...+++|.|.|+||..+-.+|.. . +-.++|+++.
T Consensus 129 tGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ig 208 (437)
T PLN02209 129 SGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLG 208 (437)
T ss_pred CCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEec
Confidence 888853322 1123334567777777665433 34555689999999999876666542 1 1247899999
Q ss_pred Cccccc
Q 018984 190 APMCKI 195 (348)
Q Consensus 190 ~~~~~~ 195 (348)
++..+.
T Consensus 209 ng~td~ 214 (437)
T PLN02209 209 NPITHI 214 (437)
T ss_pred CcccCh
Confidence 887664
No 169
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.60 E-value=6.7e-06 Score=65.51 Aligned_cols=103 Identities=18% Similarity=0.153 Sum_probs=66.4
Q ss_pred eeEEEEecCCCcccc-cchhHHHHHHh-CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeE
Q 018984 84 GLVCYCHGYGDTCTF-FFEGTARKLAS-SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSF 161 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~-~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 161 (348)
.++|+.||.|.+... -...+.+.+.. .|..+.++.. | .+ ........+.+.++.+.+.+..... ..+ -++
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g--~~-~~~s~~~~~~~Qve~vce~l~~~~~---l~~-G~n 97 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-G--NG-VGDSWLMPLTQQAEIACEKVKQMKE---LSQ-GYN 97 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-C--CC-ccccceeCHHHHHHHHHHHHhhchh---hhC-cEE
Confidence 458999999876542 24455555533 2666766654 2 22 2222223455555555555544222 222 489
Q ss_pred EEEeChhHHHHHHHHHhCCC--CcceEEEeCcccc
Q 018984 162 LFGQSLGGAVALKVHLKQPN--AWSGAILVAPMCK 194 (348)
Q Consensus 162 l~GhS~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 194 (348)
++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999999987 5999999986543
No 170
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.60 E-value=7.7e-06 Score=67.69 Aligned_cols=127 Identities=17% Similarity=0.236 Sum_probs=79.1
Q ss_pred CceeEEEEeccCCCCCceeEEEEecCCCcccc-cchhHHHHHHhC-CceEEeecCCCCccCCCCCC--------------
Q 018984 67 GVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF-FFEGTARKLASS-GYGVFAMDYPGFGLSAGLHG-------------- 130 (348)
Q Consensus 67 g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~l~~~-g~~vi~~D~~G~G~s~~~~~-------------- 130 (348)
..+|.|++...+....+..|+++.|+|++... ++..+.+.++++ +..|+.+++-|.|.......
T Consensus 19 ~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~ 98 (403)
T PF11144_consen 19 ESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKK 98 (403)
T ss_pred cceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHH
Confidence 35778888665555557899999999988763 456667777765 34445566766653311000
Q ss_pred ----------CCC---ChhHH-------------------------------------------HHHHHHHHHHHHcCCC
Q 018984 131 ----------YIP---SFDRL-------------------------------------------VDDVIEHYSNIKEYPE 154 (348)
Q Consensus 131 ----------~~~---~~~~~-------------------------------------------~~d~~~~l~~l~~~~~ 154 (348)
... ..... +-|+..++.++.....
T Consensus 99 ~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~ 178 (403)
T PF11144_consen 99 SLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFP 178 (403)
T ss_pred HHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 000 11111 1233333333333321
Q ss_pred CC--CCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccc
Q 018984 155 FR--TLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 193 (348)
Q Consensus 155 ~~--~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 193 (348)
-. +.|++++|+|.||++|...|.-.|..+++++=-+++.
T Consensus 179 ~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 179 KNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred cccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 12 2489999999999999999999999999988766654
No 171
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.58 E-value=1.3e-06 Score=76.10 Aligned_cols=112 Identities=24% Similarity=0.301 Sum_probs=74.1
Q ss_pred ceeEEEEecCCCccccc-chhHHHHHHhC-CceEEeecCCCCccCCCCCC------CCCChhHHHHHHHHHHHHHHcCC-
Q 018984 83 KGLVCYCHGYGDTCTFF-FEGTARKLASS-GYGVFAMDYPGFGLSAGLHG------YIPSFDRLVDDVIEHYSNIKEYP- 153 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~-~~~~~~~l~~~-g~~vi~~D~~G~G~s~~~~~------~~~~~~~~~~d~~~~l~~l~~~~- 153 (348)
.|++|++.|=+.-...+ ...+...|+++ |-.++++++|-+|.|.+... ...+.++.++|+..++++++.+.
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 67777776654332211 12244445543 78899999999999974311 22478999999999999998553
Q ss_pred CCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 154 EFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 154 ~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
...+.|++++|-|+||++|..+-.++|+.|.+.+..++++.
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 23556899999999999999999999999999999887765
No 172
>COG0627 Predicted esterase [General function prediction only]
Probab=98.55 E-value=7.1e-06 Score=66.90 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=72.0
Q ss_pred CCceeEEEEecCCCccccc--chhHHHHHHhCCceEEeecCC--------------CCccCCCC------CCC-CCChhH
Q 018984 81 QPKGLVCYCHGYGDTCTFF--FEGTARKLASSGYGVFAMDYP--------------GFGLSAGL------HGY-IPSFDR 137 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~--~~~~~~~l~~~g~~vi~~D~~--------------G~G~s~~~------~~~-~~~~~~ 137 (348)
++-|+++++||..++...+ ...+-......|+.++++|-. |-+.|-.. ... .+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 4578999999998875332 233444555568888887433 22222111 011 134444
Q ss_pred H-HHHHHHHHHHHHcCCCCCC--CCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccc
Q 018984 138 L-VDDVIEHYSNIKEYPEFRT--LPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIAD 197 (348)
Q Consensus 138 ~-~~d~~~~l~~l~~~~~~~~--~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 197 (348)
+ ..++...++.... ... .+..++||||||.-|+.+|.++|++++.+..+++......
T Consensus 132 fl~~ELP~~~~~~f~---~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~ 191 (316)
T COG0627 132 FLTQELPALWEAAFP---ADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSS 191 (316)
T ss_pred HHHhhhhHHHHHhcC---cccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccc
Confidence 3 4455544443222 111 2578999999999999999999999999999998876553
No 173
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.54 E-value=8.2e-07 Score=71.55 Aligned_cols=112 Identities=18% Similarity=0.193 Sum_probs=76.1
Q ss_pred CCceeEEEEecCCCcccccchhHHHHHHhCC--ceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCC
Q 018984 81 QPKGLVCYCHGYGDTCTFFFEGTARKLASSG--YGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTL 158 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g--~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 158 (348)
..+.++||+||+..+-..--...++.....| ...+.+-||..|.--.-.....+-..-..++..+|+.|..... ..
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~--~~ 191 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP--VK 191 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC--Cc
Confidence 3478999999998664322233444444444 4578889997775332222222445557789999999987743 44
Q ss_pred CeEEEEeChhHHHHHHHHHh--------CCCCcceEEEeCcccc
Q 018984 159 PSFLFGQSLGGAVALKVHLK--------QPNAWSGAILVAPMCK 194 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~--------~p~~v~~~vl~~~~~~ 194 (348)
+|+|++||||.+++++...+ .+.+++-+|+-+|-.+
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 79999999999999987654 2346888888888665
No 174
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.53 E-value=0.00013 Score=62.40 Aligned_cols=140 Identities=17% Similarity=0.245 Sum_probs=90.3
Q ss_pred ccceeeEEecC--CCceeEEEEeccCCC-CCceeEEEEecCCCcccccchhHHHHH------------Hh------CCce
Q 018984 55 LKTEESYEVNS--RGVEIFCKSWLPETS-QPKGLVCYCHGYGDTCTFFFEGTARKL------------AS------SGYG 113 (348)
Q Consensus 55 ~~~~~~~~~~~--~g~~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~~~~~~~~l------------~~------~g~~ 113 (348)
++....++... .+..|+|+.+...+. ..+|+||.+-|++|+++. . .+..++ .. +-..
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl-~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aN 119 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSL-G-GLFEENGPFRVKYNGKTLYLNPYSWNKEAN 119 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccch-h-hhhhhcCCeEEcCCCCcceeCCcccccccc
Confidence 44455555544 589999998876543 338999999999988764 1 221111 00 1146
Q ss_pred EEeecCC-CCccCCCCC--CCCCChhHHHHHHHHHH-HHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh----C------
Q 018984 114 VFAMDYP-GFGLSAGLH--GYIPSFDRLVDDVIEHY-SNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK----Q------ 179 (348)
Q Consensus 114 vi~~D~~-G~G~s~~~~--~~~~~~~~~~~d~~~~l-~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~----~------ 179 (348)
++-+|.| |.|.|-... ....+-+..++|+..++ +++..-+++.++++.|.|-|++|...-.+|.. .
T Consensus 120 iLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~ 199 (454)
T KOG1282|consen 120 ILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKP 199 (454)
T ss_pred EEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCC
Confidence 7888887 777765322 22234555667766555 45555567778899999999999776666542 2
Q ss_pred CCCcceEEEeCcccccc
Q 018984 180 PNAWSGAILVAPMCKIA 196 (348)
Q Consensus 180 p~~v~~~vl~~~~~~~~ 196 (348)
+-.++|+++-+|..+..
T Consensus 200 ~iNLkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 200 NINLKGYAIGNGLTDPE 216 (454)
T ss_pred cccceEEEecCcccCcc
Confidence 12578999888877643
No 175
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.48 E-value=4.7e-07 Score=75.27 Aligned_cols=103 Identities=19% Similarity=0.144 Sum_probs=72.1
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCce---EEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCC
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYG---VFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLP 159 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 159 (348)
.-+++++||++..... |..+...+...|+. ++.+++++.. . .......-++....+.+++.....+ +
T Consensus 59 ~~pivlVhG~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~-~--~~~~~~~~~ql~~~V~~~l~~~ga~------~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYGN-FLPLDYRLAILGWLTNGVYAFELSGGD-G--TYSLAVRGEQLFAYVDEVLAKTGAK------K 128 (336)
T ss_pred CceEEEEccCcCCcch-hhhhhhhhcchHHHhcccccccccccC-C--CccccccHHHHHHHHHHHHhhcCCC------c
Confidence 4479999999766665 66777777666777 8888888651 1 1111113344444455555544443 8
Q ss_pred eEEEEeChhHHHHHHHHHhCC--CCcceEEEeCccccc
Q 018984 160 SFLFGQSLGGAVALKVHLKQP--NAWSGAILVAPMCKI 195 (348)
Q Consensus 160 v~l~GhS~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~ 195 (348)
+.++||||||.+...++...+ .+|+.++.++++-..
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 999999999999999999888 789999999876543
No 176
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.48 E-value=1.2e-06 Score=73.71 Aligned_cols=123 Identities=20% Similarity=0.257 Sum_probs=76.3
Q ss_pred eEEEEeccC-CCCCceeEEEEecCC---Ccccc-cchhHHHHHHhCC-ceEEeecCCC--CccCCCC--C-CCCCChhHH
Q 018984 70 IFCKSWLPE-TSQPKGLVCYCHGYG---DTCTF-FFEGTARKLASSG-YGVFAMDYPG--FGLSAGL--H-GYIPSFDRL 138 (348)
Q Consensus 70 l~~~~~~p~-~~~~~~~vv~~HG~~---~~~~~-~~~~~~~~l~~~g-~~vi~~D~~G--~G~s~~~--~-~~~~~~~~~ 138 (348)
|+.-+|.|+ +..+.|++|+|||++ ++... +|+ ...|+++| +-|+++++|- .|.-+-. . .....-.--
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 666778888 556689999999985 22222 233 35788887 9999999883 2221110 0 000011123
Q ss_pred HHHHHHHHHHHHcC---CCCCCCCeEEEEeChhHHHHHHHHHh--CCCCcceEEEeCcccc
Q 018984 139 VDDVIEHYSNIKEY---PEFRTLPSFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCK 194 (348)
Q Consensus 139 ~~d~~~~l~~l~~~---~~~~~~~v~l~GhS~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 194 (348)
..|...+|+|+..+ .+-+..+|.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 45666666666543 23344589999999999998877654 2235777778877654
No 177
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.46 E-value=2.6e-05 Score=59.39 Aligned_cols=80 Identities=25% Similarity=0.335 Sum_probs=50.5
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCce-EEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeE
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYG-VFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSF 161 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~-vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 161 (348)
+..|||..|+|++... +..+. ...++. ++++|+|..- ++. |+ . . -++|.
T Consensus 11 ~~LilfF~GWg~d~~~-f~hL~---~~~~~D~l~~yDYr~l~-----------~d~---~~----~--~------y~~i~ 60 (213)
T PF04301_consen 11 KELILFFAGWGMDPSP-FSHLI---LPENYDVLICYDYRDLD-----------FDF---DL----S--G------YREIY 60 (213)
T ss_pred CeEEEEEecCCCChHH-hhhcc---CCCCccEEEEecCcccc-----------ccc---cc----c--c------CceEE
Confidence 5789999999988654 33331 123454 4667887321 110 11 0 1 12799
Q ss_pred EEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 162 LFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 162 l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
|||+|||-++|..+....| ++..|.+++...
T Consensus 61 lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred EEEEeHHHHHHHHHhccCC--cceeEEEECCCC
Confidence 9999999999988876554 666666765544
No 178
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.46 E-value=0.00013 Score=62.77 Aligned_cols=138 Identities=17% Similarity=0.161 Sum_probs=83.2
Q ss_pred ceeeEEecC--CCceeEEEEeccCCC-CCceeEEEEecCCCcccccchhHH---H-------------HHHh------CC
Q 018984 57 TEESYEVNS--RGVEIFCKSWLPETS-QPKGLVCYCHGYGDTCTFFFEGTA---R-------------KLAS------SG 111 (348)
Q Consensus 57 ~~~~~~~~~--~g~~l~~~~~~p~~~-~~~~~vv~~HG~~~~~~~~~~~~~---~-------------~l~~------~g 111 (348)
....++... .+..++|+.+...+. ...|+|+++-|++|+++. +..+. + .|.. +-
T Consensus 37 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 115 (433)
T PLN03016 37 LETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM 115 (433)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccccCCCCCceeeCCCchhhc
Confidence 444454443 356788888765433 337999999999887653 11110 0 1110 12
Q ss_pred ceEEeecC-CCCccCCCCCCCC-CChhHHHHHHHHHHHHHH-cCCCCCCCCeEEEEeChhHHHHHHHHHh----C-----
Q 018984 112 YGVFAMDY-PGFGLSAGLHGYI-PSFDRLVDDVIEHYSNIK-EYPEFRTLPSFLFGQSLGGAVALKVHLK----Q----- 179 (348)
Q Consensus 112 ~~vi~~D~-~G~G~s~~~~~~~-~~~~~~~~d~~~~l~~l~-~~~~~~~~~v~l~GhS~Gg~~a~~~a~~----~----- 179 (348)
.+++-+|. -|.|.|....... .+-.+.++++..++...- ..+.+...+++|.|.|+||..+-.+|.. .
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 67899994 4889886432211 121233466666665543 3334456689999999999876666543 1
Q ss_pred -CCCcceEEEeCccccc
Q 018984 180 -PNAWSGAILVAPMCKI 195 (348)
Q Consensus 180 -p~~v~~~vl~~~~~~~ 195 (348)
+-.++|+++-+|..+.
T Consensus 196 ~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 196 PPINLQGYMLGNPVTYM 212 (433)
T ss_pred CcccceeeEecCCCcCc
Confidence 2257899998887653
No 179
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.43 E-value=0.00014 Score=60.52 Aligned_cols=156 Identities=13% Similarity=0.123 Sum_probs=93.6
Q ss_pred CCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCCcccCCCchhHHHHh
Q 018984 154 EFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFR 233 (348)
Q Consensus 154 ~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (348)
+..-.++++.|.|==|..++..|+. ..||++++-+.-... .....+....+.+.. .......
T Consensus 168 ~~~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~L-----N~~~~l~h~y~~yG~---~ws~a~~--------- 229 (367)
T PF10142_consen 168 GVNIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVL-----NMKANLEHQYRSYGG---NWSFAFQ--------- 229 (367)
T ss_pred CCCccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccC-----CcHHHHHHHHHHhCC---CCccchh---------
Confidence 3455589999999999999999884 457888876542210 011111111111110 1100000
Q ss_pred chhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCC
Q 018984 234 DLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD 313 (348)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (348)
.............+.+...... .|......++++|.++|.|..|++..++....+++.+++ ...+..+|+
T Consensus 230 -----dY~~~gi~~~l~tp~f~~L~~i----vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vPN 299 (367)
T PF10142_consen 230 -----DYYNEGITQQLDTPEFDKLMQI----VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVPN 299 (367)
T ss_pred -----hhhHhCchhhcCCHHHHHHHHh----cCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCCC
Confidence 0000011111112222222221 122334567799999999999999999999999999964 468889999
Q ss_pred CCcccccCCChhHHHHHHHHHHHHHhhhcCC
Q 018984 314 AFHSLLEGEPDDMIIRVFADIISWLDDHSRS 344 (348)
Q Consensus 314 ~gH~~~~~~~~~~~~~~~~~i~~fl~~~~~~ 344 (348)
++|.... .. +.+.+..|+.....+
T Consensus 300 ~~H~~~~---~~----~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 300 AGHSLIG---SD----VVQSLRAFYNRIQNG 323 (367)
T ss_pred CCcccch---HH----HHHHHHHHHHHHHcC
Confidence 9998876 33 788888998876544
No 180
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.41 E-value=6.3e-06 Score=68.00 Aligned_cols=117 Identities=20% Similarity=0.263 Sum_probs=76.3
Q ss_pred EEEec-cCC--CCCceeEEEEecCCCccccc------chhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHH
Q 018984 72 CKSWL-PET--SQPKGLVCYCHGYGDTCTFF------FEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDV 142 (348)
Q Consensus 72 ~~~~~-p~~--~~~~~~vv~~HG~~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~ 142 (348)
++... |.. .+..|+||++||+|-..... ...+...| + ...++++|+.-... ...+ ..+..+..++
T Consensus 108 ~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~--~~~~--~~yPtQL~ql 181 (374)
T PF10340_consen 108 YWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSS--DEHG--HKYPTQLRQL 181 (374)
T ss_pred EEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEecccccc--ccCC--CcCchHHHHH
Confidence 44444 443 23479999999998554331 11222333 2 46888999875431 1111 3566667788
Q ss_pred HHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCC-----CCcceEEEeCcccccc
Q 018984 143 IEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP-----NAWSGAILVAPMCKIA 196 (348)
Q Consensus 143 ~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~ 196 (348)
.+.++++.... +..+|+|+|-|.||.+++.+.+... ...+++|+++|+....
T Consensus 182 v~~Y~~Lv~~~--G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 182 VATYDYLVESE--GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHhcc--CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 88888887432 3458999999999999998765321 2368999999998765
No 181
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.35 E-value=2e-05 Score=60.57 Aligned_cols=249 Identities=12% Similarity=0.082 Sum_probs=120.7
Q ss_pred eEEEEeccCCCCCceeEEEEecCCCcccccchh--HHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHH----
Q 018984 70 IFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEG--TARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVI---- 143 (348)
Q Consensus 70 l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~--~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~---- 143 (348)
-++..+.|. +..++-|++-|-|.+. |.+. +...+.++|...+.+.-|-+|+...+......++ .+.|+.
T Consensus 102 A~~~~liPQ--K~~~KOG~~a~tgdh~--y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le-~vtDlf~mG~ 176 (371)
T KOG1551|consen 102 ARVAWLIPQ--KMADLCLSWALTGDHV--YTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLE-YVTDLFKMGR 176 (371)
T ss_pred eeeeeeccc--CcCCeeEEEeecCCce--eEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHH-HHHHHHHhhH
Confidence 344444442 2234445554544432 2333 4566677889999999999998754432211111 122221
Q ss_pred HHHHHHHc----CCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccccccCCChHHHHHHHHHHHhhcCCC
Q 018984 144 EHYSNIKE----YPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKH 219 (348)
Q Consensus 144 ~~l~~l~~----~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (348)
+.|++... ....+-.+..++|-||||.+|..+...++..|.-+=++++....... ... ........+.+....
T Consensus 177 A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~-teg-~l~~~~s~~~~~~~~- 253 (371)
T KOG1551|consen 177 ATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSA-TEG-LLLQDTSKMKRFNQT- 253 (371)
T ss_pred HHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhh-hhh-hhhhhhHHHHhhccC-
Confidence 11111111 11112237899999999999999998877666655555443221110 000 000000011111100
Q ss_pred cccCCCchhHHHHhchhhhhhhhcccccccCCcchHHHHHHHHhhHHHHHhccCCCCc-----EEEEecCCCCcCCHHHH
Q 018984 220 KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLP-----LLILHGENDTVTDPSVS 294 (348)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----~l~i~g~~D~~~~~~~~ 294 (348)
... ....+............ ...++ .......+++...+-...+....+| +.++.+++|.++|....
T Consensus 254 -----t~~-~~~~~r~p~Q~~~~~~~-~~srn-~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv 325 (371)
T KOG1551|consen 254 -----TNK-SGYTSRNPAQSYHLLSK-EQSRN-SRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGV 325 (371)
T ss_pred -----cch-hhhhhhCchhhHHHHHH-Hhhhc-chHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCc
Confidence 000 00000000000000000 00000 1122222222222211233334444 56788999999999888
Q ss_pred HHHHHHhcCCCceEEEcCCCCcc-cccCCChhHHHHHHHHHHHHHhhh
Q 018984 295 KALYEKASSKDKKCILYKDAFHS-LLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~gH~-~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
..+.+.. |++++..++ +||. .++-+.+. +-..|.+-|++.
T Consensus 326 ~~lQ~~W--Pg~eVr~~e-gGHVsayl~k~dl----fRR~I~d~L~R~ 366 (371)
T KOG1551|consen 326 RSLQEIW--PGCEVRYLE-GGHVSAYLFKQDL----FRRAIVDGLDRL 366 (371)
T ss_pred HHHHHhC--CCCEEEEee-cCceeeeehhchH----HHHHHHHHHHhh
Confidence 8888888 899999999 6885 34445566 556666666544
No 182
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.32 E-value=7.6e-06 Score=73.67 Aligned_cols=123 Identities=20% Similarity=0.091 Sum_probs=70.4
Q ss_pred eEEEEeccCCCC---CceeEEEEecCCCcccc---cchhHHHHHHhCCceEEeecCCC----CccCCCCCCCCCChhHHH
Q 018984 70 IFCKSWLPETSQ---PKGLVCYCHGYGDTCTF---FFEGTARKLASSGYGVFAMDYPG----FGLSAGLHGYIPSFDRLV 139 (348)
Q Consensus 70 l~~~~~~p~~~~---~~~~vv~~HG~~~~~~~---~~~~~~~~l~~~g~~vi~~D~~G----~G~s~~~~~~~~~~~~~~ 139 (348)
|+.-+|.|.... ..|++|++||++..... ....-...++.++.-||.+++|= +-.+...... .-.--.
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~Gl 186 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYGL 186 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhhh
Confidence 677778887544 36999999998632211 12223345567789999999993 2112111100 122235
Q ss_pred HHHHHHHHHHHcC---CCCCCCCeEEEEeChhHHHHHHHHHh--CCCCcceEEEeCcccc
Q 018984 140 DDVIEHYSNIKEY---PEFRTLPSFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCK 194 (348)
Q Consensus 140 ~d~~~~l~~l~~~---~~~~~~~v~l~GhS~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 194 (348)
.|...+|+|++.+ .+-+..+|.|+|||.||..+..++.. ....++++|+.++...
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 5666777777654 22234489999999999988776654 2357999999998543
No 183
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.29 E-value=2.5e-06 Score=67.27 Aligned_cols=108 Identities=18% Similarity=0.167 Sum_probs=53.3
Q ss_pred ceeEEEEecCCCcccc--cchhHHHHHHh--CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCC
Q 018984 83 KGLVCYCHGYGDTCTF--FFEGTARKLAS--SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTL 158 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~--~~~~~~~~l~~--~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~ 158 (348)
..+||+.||+|.+... .+..+.+.+.+ -|..|.+++.-....++........+.+.++.+.+.+.. .....+
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~---~p~L~~- 80 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLAN---DPELAN- 80 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH----GGGTT-
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhh---Chhhhc-
Confidence 3469999999965421 13444443333 377788887632211111111111334444444444443 322222
Q ss_pred CeEEEEeChhHHHHHHHHHhCCC-CcceEEEeCcccc
Q 018984 159 PSFLFGQSLGGAVALKVHLKQPN-AWSGAILVAPMCK 194 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~ 194 (348)
-++++|+|.||.+.-.++.++|+ .|+.+|.++++-.
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 59999999999999999999874 5999999986543
No 184
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.25 E-value=6.4e-05 Score=58.78 Aligned_cols=118 Identities=16% Similarity=0.164 Sum_probs=83.1
Q ss_pred EEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHH
Q 018984 71 FCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIK 150 (348)
Q Consensus 71 ~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~ 150 (348)
++....++...+.|.|+++-...++.....+...+.|... ..|+.-|+-....-+-..+. .+++++++-+.+.+..++
T Consensus 91 ~F~r~~~~~r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~G 168 (415)
T COG4553 91 HFERDMPDARKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFLG 168 (415)
T ss_pred hhhhccccccCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHhC
Confidence 3444555556667889999988888766667777777655 67888888755443322233 589999999999999987
Q ss_pred cCCCCCCCCeEEEEeChhHH-----HHHHHHHhCCCCcceEEEeCccccccc
Q 018984 151 EYPEFRTLPSFLFGQSLGGA-----VALKVHLKQPNAWSGAILVAPMCKIAD 197 (348)
Q Consensus 151 ~~~~~~~~~v~l~GhS~Gg~-----~a~~~a~~~p~~v~~~vl~~~~~~~~~ 197 (348)
. .+++++.|.-+. +++..+...|.....+++++++.+...
T Consensus 169 p-------~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~ 213 (415)
T COG4553 169 P-------DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARK 213 (415)
T ss_pred C-------CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccccc
Confidence 6 367777776543 344444556777899999998877443
No 185
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.23 E-value=6.3e-06 Score=70.17 Aligned_cols=85 Identities=18% Similarity=0.128 Sum_probs=62.8
Q ss_pred cchhHHHHHHhCCceE-----Ee-ecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHH
Q 018984 99 FFEGTARKLASSGYGV-----FA-MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVA 172 (348)
Q Consensus 99 ~~~~~~~~l~~~g~~v-----i~-~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a 172 (348)
+|..+++.|.+.||.. .+ +|+|---. ..+++...+...|+..... .+.+|+|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~---------~~~~~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA---------ERDEYFTKLKQLIEEAYKK---NGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh---------hHHHHHHHHHHHHHHHHHh---cCCcEEEEEeCCCchHH
Confidence 5889999998877753 22 67772110 3446677788888777654 25699999999999999
Q ss_pred HHHHHhCCC------CcceEEEeCccccc
Q 018984 173 LKVHLKQPN------AWSGAILVAPMCKI 195 (348)
Q Consensus 173 ~~~a~~~p~------~v~~~vl~~~~~~~ 195 (348)
..+....+. .|+++|.++++...
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 999887643 59999999977653
No 186
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.21 E-value=5.6e-05 Score=61.96 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=72.2
Q ss_pred eeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHH
Q 018984 69 EIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSN 148 (348)
Q Consensus 69 ~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 148 (348)
.|....+....++....-||+.|-|+=... -+.+.+.|.++|+.|+.+|-.-|-.|. -+.++.+.|+..++++
T Consensus 246 aLPV~e~~a~~~~sd~~av~~SGDGGWr~l-Dk~v~~~l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~ 318 (456)
T COG3946 246 ALPVVEVPAKPGNSDTVAVFYSGDGGWRDL-DKEVAEALQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRF 318 (456)
T ss_pred CCCceeeccCCCCcceEEEEEecCCchhhh-hHHHHHHHHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHHH
Confidence 344433332233345667777776654333 567889999999999999965444443 2678889999999999
Q ss_pred HHcCCCCCCCCeEEEEeChhHHHHHHHHHhCC
Q 018984 149 IKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 149 l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p 180 (348)
...+ ++..+++|+|+|+|+-+.-..-.+.|
T Consensus 319 y~~~--w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 319 YARR--WGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHh--hCcceEEEEeecccchhhHHHHHhCC
Confidence 8876 44558999999999988665555554
No 187
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.14 E-value=3.1e-05 Score=59.71 Aligned_cols=105 Identities=21% Similarity=0.295 Sum_probs=66.0
Q ss_pred CCceeEEEEecC--CCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCC--
Q 018984 81 QPKGLVCYCHGY--GDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFR-- 156 (348)
Q Consensus 81 ~~~~~vv~~HG~--~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~-- 156 (348)
+|+.+|=|+.|. |......|+.+.+.|+++||.|++.-+.- | .+...--.+........++.+....+..
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 456788888885 34455568999999999999999987641 0 0000001112223333444444332222
Q ss_pred CCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCc
Q 018984 157 TLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 191 (348)
Q Consensus 157 ~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~ 191 (348)
..+++-+|||+|+-+-+.+...++..-++-|+++-
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 23788999999999988888777655577777764
No 188
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.14 E-value=4.8e-05 Score=62.47 Aligned_cols=108 Identities=20% Similarity=0.225 Sum_probs=80.2
Q ss_pred eeEEEEecCCCccccc------chhHHHHHHhCCceEEeecCCCCccCCCCCC---------CCCChhHHHHHHHHHHHH
Q 018984 84 GLVCYCHGYGDTCTFF------FEGTARKLASSGYGVFAMDYPGFGLSAGLHG---------YIPSFDRLVDDVIEHYSN 148 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~---------~~~~~~~~~~d~~~~l~~ 148 (348)
.+|+|.-|.-++.+.+ .-.+++.| +.-++-+++|-+|+|.+-.. ...+.++...|...++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 4588888876554431 11233433 56789999999999864211 112567888999999999
Q ss_pred HHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 149 IKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 149 l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
++........+|+.+|-|+||+++..+=.+||+.+.|....+.+.-
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 9988666677999999999999999999999998888776654433
No 189
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.10 E-value=0.00016 Score=57.42 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=61.3
Q ss_pred CceeEEEEecCCCcccccchhHHHHHHhCC----ceEEeecCCCCccCCCCCCCCCChhHHHHHH-HHHHHHHHcCCCC-
Q 018984 82 PKGLVCYCHGYGDTCTFFFEGTARKLASSG----YGVFAMDYPGFGLSAGLHGYIPSFDRLVDDV-IEHYSNIKEYPEF- 155 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g----~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~-~~~l~~l~~~~~~- 155 (348)
+.|++++.||-......-...+.+.|...| -.++.+|.--.-.- ....+..+.+.+.+ .+++-++......
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R---~~~~~~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKR---REELHCNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHH---HHHhcccHHHHHHHHHHhhhhhhccCccc
Confidence 479999999854221111223444444433 45666665421100 00011222222222 2333333333211
Q ss_pred -CCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 156 -RTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 156 -~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
....-+|+|.|+||.+++..+..+|+.+-.++..+|...
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 122458999999999999999999999999999888764
No 190
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.09 E-value=1.9e-05 Score=53.28 Aligned_cols=60 Identities=22% Similarity=0.277 Sum_probs=50.6
Q ss_pred CCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 275 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 275 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
..|+|++.++.|+.+|.+.++.+.+.+ ++.+++.+++.||..+. ..... +.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l--~~s~lvt~~g~gHg~~~-~~s~C---~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL--PGSRLVTVDGAGHGVYA-GGSPC---VDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC--CCceEEEEeccCcceec-CCChH---HHHHHHHHHHc
Confidence 589999999999999999999999999 67899999999999885 33321 66777788864
No 191
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.02 E-value=0.00088 Score=55.66 Aligned_cols=84 Identities=19% Similarity=0.263 Sum_probs=56.0
Q ss_pred ceEEeecCC-CCccCCCCCC-CCCChhHHHHHHHHHHHHHH-cCCCCCCCCeEEEEeChhHHHHHHHHHh----C-----
Q 018984 112 YGVFAMDYP-GFGLSAGLHG-YIPSFDRLVDDVIEHYSNIK-EYPEFRTLPSFLFGQSLGGAVALKVHLK----Q----- 179 (348)
Q Consensus 112 ~~vi~~D~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~-~~~~~~~~~v~l~GhS~Gg~~a~~~a~~----~----- 179 (348)
.+++-+|.| |.|.|-.... ...+-++.++|+..+|+..- ..+.+...+++|.|-|+||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899999 8888864322 11122334577776666554 3345567799999999999877666643 1
Q ss_pred -CCCcceEEEeCccccc
Q 018984 180 -PNAWSGAILVAPMCKI 195 (348)
Q Consensus 180 -p~~v~~~vl~~~~~~~ 195 (348)
+-.++|+++-+|+...
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 1257899988887654
No 192
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.00 E-value=7.1e-05 Score=66.49 Aligned_cols=106 Identities=18% Similarity=0.192 Sum_probs=60.4
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHh----------------CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHH
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLAS----------------SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHY 146 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~----------------~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l 146 (348)
.-+|+|++|..|+... -+.++..... ..|+.+++|+-+- -..-.+ ..+.++++-+.++|
T Consensus 89 GIPVLFIPGNAGSyKQ-vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~tAm~G--~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQ-VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--FTAMHG--HILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHH-HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--hhhhcc--HhHHHHHHHHHHHH
Confidence 4579999999888654 3444443321 1355666665420 000011 25666666666666
Q ss_pred HHHHcC----CCCC---CCCeEEEEeChhHHHHHHHHHh---CCCCcceEEEeCccc
Q 018984 147 SNIKEY----PEFR---TLPSFLFGQSLGGAVALKVHLK---QPNAWSGAILVAPMC 193 (348)
Q Consensus 147 ~~l~~~----~~~~---~~~v~l~GhS~Gg~~a~~~a~~---~p~~v~~~vl~~~~~ 193 (348)
+++... .+++ ...|+++||||||.+|...+.. .+..|.-++..+++.
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 555332 1222 2359999999999999876643 234466666666543
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.97 E-value=0.00032 Score=52.26 Aligned_cols=128 Identities=19% Similarity=0.255 Sum_probs=70.4
Q ss_pred CCceeEEEEecCCCccc-ccch--------------hHHHHHHhCCceEEeecCCC---CccC-CCCCCCCCChhHHHHH
Q 018984 81 QPKGLVCYCHGYGDTCT-FFFE--------------GTARKLASSGYGVFAMDYPG---FGLS-AGLHGYIPSFDRLVDD 141 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~-~~~~--------------~~~~~l~~~g~~vi~~D~~G---~G~s-~~~~~~~~~~~~~~~d 141 (348)
++...+|++||.|.-.. .|-+ ++++.-.+.||.|++.+--- +-.+ ..+..+..+. ++.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~---veh 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTP---VEH 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccch---HHH
Confidence 34668999999874432 2211 23344446799999887431 1111 1121121122 222
Q ss_pred HHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC--CcceEEEeCccccccccCCChHHHHHHHHHHH
Q 018984 142 VIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN--AWSGAILVAPMCKIADDMVPPFLVKQILIGIA 213 (348)
Q Consensus 142 ~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (348)
..-+-..+... .....+.++.||+||...+.+..++|+ +|.++.+.+++...+......++......+..
T Consensus 176 ~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p~a~~~e~~~~n~c~wva 247 (297)
T KOG3967|consen 176 AKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSPQAKNKEYLCDNACDWVA 247 (297)
T ss_pred HHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCchhcCccHHHHHHhhhhh
Confidence 22222222221 223379999999999999999999885 57777777766554443333344333333333
No 194
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.92 E-value=0.00059 Score=53.43 Aligned_cols=41 Identities=24% Similarity=0.349 Sum_probs=35.9
Q ss_pred CCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 154 EFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 154 ~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
..+..+..++|||+||.+++.....+|+.+...++++|...
T Consensus 133 ~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 133 RTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred ccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 34455789999999999999999999999999999998753
No 195
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.86 E-value=0.00022 Score=60.35 Aligned_cols=113 Identities=16% Similarity=0.114 Sum_probs=84.6
Q ss_pred CceeEEEEecCCCccccc---c-hhHHHHHHhCCceEEeecCCCCccCCCCCCC------CCChhHHHHHHHHHHHHHHc
Q 018984 82 PKGLVCYCHGYGDTCTFF---F-EGTARKLASSGYGVFAMDYPGFGLSAGLHGY------IPSFDRLVDDVIEHYSNIKE 151 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~~---~-~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~------~~~~~~~~~d~~~~l~~l~~ 151 (348)
..|..|+|.|=|.....| - ..+...-.+.|-.|+..++|-+|.|.+.... ..+..+...|+.++|+.+..
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 367888888766444321 0 1222333344889999999999988543221 13677889999999999998
Q ss_pred CCCCCCC-CeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 152 YPEFRTL-PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 152 ~~~~~~~-~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
+.+..+. +.+.+|-|+-|.++..+=..+|+.+.|.|..++++.
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 8766554 899999999999999999999999999888876655
No 196
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.76 E-value=0.00047 Score=53.52 Aligned_cols=102 Identities=24% Similarity=0.264 Sum_probs=64.7
Q ss_pred eeEEEEecCCCcccc-cchhHHHHHHhC-CceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeE
Q 018984 84 GLVCYCHGYGDTCTF-FFEGTARKLASS-GYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSF 161 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~-~~~~~~~~l~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 161 (348)
-++|++||.+.+... -...+.+.+.+. |..|+++|. |-|. .........+.++.+.+.+. ..+.... -+.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~---~~s~l~pl~~Qv~~~ce~v~---~m~~lsq-Gyn 95 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGI---KDSSLMPLWEQVDVACEKVK---QMPELSQ-GYN 95 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCc---chhhhccHHHHHHHHHHHHh---cchhccC-ceE
Confidence 358899999876653 245666666554 888899886 4441 11111133444444444444 3222222 589
Q ss_pred EEEeChhHHHHHHHHHhCCC-CcceEEEeCccc
Q 018984 162 LFGQSLGGAVALKVHLKQPN-AWSGAILVAPMC 193 (348)
Q Consensus 162 l~GhS~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 193 (348)
++|.|.||.++-.++...++ .|+..|.++++-
T Consensus 96 ivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999999999999987654 588888887654
No 197
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.61 E-value=0.00018 Score=52.85 Aligned_cols=56 Identities=20% Similarity=0.181 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC----CcceEEEeCccc
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN----AWSGAILVAPMC 193 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~----~v~~~vl~~~~~ 193 (348)
......+...++....+ .+..+++++|||+||.+|..++..... ....++.++++.
T Consensus 8 ~~~~~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34455555555555432 345589999999999999998887654 466677777654
No 198
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.57 E-value=0.0073 Score=51.78 Aligned_cols=126 Identities=14% Similarity=0.112 Sum_probs=74.1
Q ss_pred eEEEEeccCC-CCCceeEEEEecCCCcccccchhHHH-------------------HHHhCCceEEeec-CCCCccCCC-
Q 018984 70 IFCKSWLPET-SQPKGLVCYCHGYGDTCTFFFEGTAR-------------------KLASSGYGVFAMD-YPGFGLSAG- 127 (348)
Q Consensus 70 l~~~~~~p~~-~~~~~~vv~~HG~~~~~~~~~~~~~~-------------------~l~~~g~~vi~~D-~~G~G~s~~- 127 (348)
..++.+.+.+ ..++|+|+++.|++|+++. +..+.+ .+... -.++-+| --|.|.|..
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~ 164 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRAL 164 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCccccc
Confidence 3444444432 3358999999999988775 333321 11111 3688899 558888874
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHcCC---CCCCCCeEEEEeChhHHHHHHHHHhCCC---CcceEEEeCccccccc
Q 018984 128 LHGYIPSFDRLVDDVIEHYSNIKEYP---EFRTLPSFLFGQSLGGAVALKVHLKQPN---AWSGAILVAPMCKIAD 197 (348)
Q Consensus 128 ~~~~~~~~~~~~~d~~~~l~~l~~~~---~~~~~~v~l~GhS~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~ 197 (348)
......++....+|+..+.+.+.... .-...+.+|+|-|+||.-+..+|...-+ ..+++|++.+......
T Consensus 165 ~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 165 GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 22222345555555555544433221 1112378999999999988887765333 3677777776655443
No 199
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.54 E-value=0.00019 Score=62.48 Aligned_cols=91 Identities=10% Similarity=-0.045 Sum_probs=59.7
Q ss_pred chhHHHHHHhCCceEEeecCCCCccCCCCCC-CCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 100 FEGTARKLASSGYGVFAMDYPGFGLSAGLHG-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 100 ~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
|..+++.|++.||. -.++.|...--+... ....-+++...+...|+.+... ..+.+|+|+||||||.+++.+...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~--nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVAT--NGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHH--cCCCeEEEEEeCCchHHHHHHHHh
Confidence 68999999999986 345544433222111 1112355666777777776543 224589999999999999988763
Q ss_pred CC---------------CCcceEEEeCcccc
Q 018984 179 QP---------------NAWSGAILVAPMCK 194 (348)
Q Consensus 179 ~p---------------~~v~~~vl~~~~~~ 194 (348)
.. ..|++.|.++++..
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccC
Confidence 21 14788898887654
No 200
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.53 E-value=0.0029 Score=47.02 Aligned_cols=112 Identities=16% Similarity=0.130 Sum_probs=69.7
Q ss_pred CceeEEEEecCCCcccccchh-------HHHHH------HhCCceEEeecCCCCccCCC-CC-C-CCCChhHHHHHHHHH
Q 018984 82 PKGLVCYCHGYGDTCTFFFEG-------TARKL------ASSGYGVFAMDYPGFGLSAG-LH-G-YIPSFDRLVDDVIEH 145 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~~~~~-------~~~~l------~~~g~~vi~~D~~G~G~s~~-~~-~-~~~~~~~~~~d~~~~ 145 (348)
...+.++++|.+.+....... +.+.+ ...+-.+-++-+.||-.-.. .. . ....-+.-+.+|..+
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f 97 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARF 97 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHH
Confidence 467899999998765432221 11111 11233455555555532211 00 0 111234457788888
Q ss_pred HHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 146 YSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 146 l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
++.|.... .+..++.++|||+|+.++-..+...+..++.+|+++++..
T Consensus 98 ~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 98 LDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 88887653 3455899999999999999888876778999999987653
No 201
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.49 E-value=0.0017 Score=50.57 Aligned_cols=36 Identities=17% Similarity=0.082 Sum_probs=29.9
Q ss_pred CeEEEEeChhHHHHHHHHHhC----CCCcceEEEeCcccc
Q 018984 159 PSFLFGQSLGGAVALKVHLKQ----PNAWSGAILVAPMCK 194 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~ 194 (348)
++.+.|||.||.+|..++... .++|..++..+++..
T Consensus 85 ~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 85 KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 699999999999999998874 357888888877653
No 202
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.42 E-value=0.00055 Score=41.02 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=27.8
Q ss_pred CCccceeeEEecCCCceeEEEEeccCC-----CCCceeEEEEecCCCccccc
Q 018984 53 DGLKTEESYEVNSRGVEIFCKSWLPET-----SQPKGLVCYCHGYGDTCTFF 99 (348)
Q Consensus 53 ~~~~~~~~~~~~~~g~~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~~~~ 99 (348)
.+...++..+++.||.-|......+.+ ...+|+|++.||+.+++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 456689999999999988876664433 23489999999999888763
No 203
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.25 E-value=0.00078 Score=56.84 Aligned_cols=85 Identities=12% Similarity=0.087 Sum_probs=58.3
Q ss_pred cchhHHHHHHhCCce------EEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHH
Q 018984 99 FFEGTARKLASSGYG------VFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVA 172 (348)
Q Consensus 99 ~~~~~~~~l~~~g~~------vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a 172 (348)
+|..+++.|..-||. -..+|+|-.- .. ....+++...+...|+..... .+++||+|++|||||.+.
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~---~~---~e~rd~yl~kLK~~iE~~~~~--~G~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSY---HN---SEERDQYLSKLKKKIETMYKL--NGGKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhcc---CC---hhHHHHHHHHHHHHHHHHHHH--cCCCceEEEecCCccHHH
Confidence 578888888887876 3567777311 11 124455666777777766544 234699999999999999
Q ss_pred HHHHHhCCC--------CcceEEEeCc
Q 018984 173 LKVHLKQPN--------AWSGAILVAP 191 (348)
Q Consensus 173 ~~~a~~~p~--------~v~~~vl~~~ 191 (348)
+.+....++ .|++.+-+++
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCc
Confidence 999988776 2555555554
No 204
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.15 E-value=0.0053 Score=53.21 Aligned_cols=113 Identities=22% Similarity=0.340 Sum_probs=68.0
Q ss_pred EEEeccCCCCCceeEEEEecCCCcc------cccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHH
Q 018984 72 CKSWLPETSQPKGLVCYCHGYGDTC------TFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEH 145 (348)
Q Consensus 72 ~~~~~p~~~~~~~~vv~~HG~~~~~------~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~ 145 (348)
|+.|.++....+-.|+-+||+|.-. +.|.+.|+..| |+.|+.+|+.-..+.. +....+++.-+
T Consensus 385 ~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP--------FPRaleEv~fA 453 (880)
T KOG4388|consen 385 LELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP--------FPRALEEVFFA 453 (880)
T ss_pred cccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC--------CCcHHHHHHHH
Confidence 3444433333456789999987321 22445555555 7999999986433322 23334455555
Q ss_pred HHHHHcC---CCCCCCCeEEEEeChhHHHHHHHHHh----CCCCcceEEEeCccccc
Q 018984 146 YSNIKEY---PEFRTLPSFLFGQSLGGAVALKVHLK----QPNAWSGAILVAPMCKI 195 (348)
Q Consensus 146 l~~l~~~---~~~~~~~v~l~GhS~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~~ 195 (348)
.-|+..+ .+..+.+|+++|-|.||.+.+.++.+ .-...+|+++..++.-+
T Consensus 454 YcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 454 YCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLL 510 (880)
T ss_pred HHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhc
Confidence 5555443 24556799999999999886655543 22234788888765543
No 205
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.05 E-value=0.0011 Score=49.82 Aligned_cols=77 Identities=16% Similarity=0.096 Sum_probs=48.7
Q ss_pred ceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh--C----CCCcce
Q 018984 112 YGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK--Q----PNAWSG 185 (348)
Q Consensus 112 ~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~--~----p~~v~~ 185 (348)
..+..+++|-..... .+..+...-+.++...++....+ .++.+++|+|+|.|+.++..++.. . .++|.+
T Consensus 40 ~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~--CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~a 114 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAAR--CPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAA 114 (179)
T ss_dssp EEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEE
T ss_pred eEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHh--CCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEE
Confidence 445556666432211 12224555577777777776655 456689999999999999999877 2 356889
Q ss_pred EEEeCccc
Q 018984 186 AILVAPMC 193 (348)
Q Consensus 186 ~vl~~~~~ 193 (348)
+++++-+.
T Consensus 115 vvlfGdP~ 122 (179)
T PF01083_consen 115 VVLFGDPR 122 (179)
T ss_dssp EEEES-TT
T ss_pred EEEecCCc
Confidence 99988654
No 206
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.05 E-value=0.015 Score=46.72 Aligned_cols=135 Identities=21% Similarity=0.318 Sum_probs=90.2
Q ss_pred ecCCCceeEEEEeccCC--CCCceeEEEEecCCCcccccchhHHH-------------HHHhCCceEEeecCC-CCccCC
Q 018984 63 VNSRGVEIFCKSWLPET--SQPKGLVCYCHGYGDTCTFFFEGTAR-------------KLASSGYGVFAMDYP-GFGLSA 126 (348)
Q Consensus 63 ~~~~g~~l~~~~~~p~~--~~~~~~vv~~HG~~~~~~~~~~~~~~-------------~l~~~g~~vi~~D~~-G~G~s~ 126 (348)
...++..+++.+|.... ...+|..+.+.|.++.+..-+..+-+ ...+. ..++.+|-| |.|.|-
T Consensus 9 ~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~-adllfvDnPVGaGfSy 87 (414)
T KOG1283|consen 9 DVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD-ADLLFVDNPVGAGFSY 87 (414)
T ss_pred eeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh-ccEEEecCCCcCceee
Confidence 33456667777665432 23478999999987665543333321 11122 467778876 777774
Q ss_pred --CCCCCCCChhHHHHHHHHHHHHHHc-CCCCCCCCeEEEEeChhHHHHHHHHHhCC---------CCcceEEEeCcccc
Q 018984 127 --GLHGYIPSFDRLVDDVIEHYSNIKE-YPEFRTLPSFLFGQSLGGAVALKVHLKQP---------NAWSGAILVAPMCK 194 (348)
Q Consensus 127 --~~~~~~~~~~~~~~d~~~~l~~l~~-~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p---------~~v~~~vl~~~~~~ 194 (348)
+...+..+..+.+.|+.++++.+-. .+++...|++|+.-|+||-+|..++...- -.+.+++|-+++..
T Consensus 88 Vdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 88 VDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 3344555788899999999988754 45677779999999999999988875422 24678888888776
Q ss_pred cccc
Q 018984 195 IADD 198 (348)
Q Consensus 195 ~~~~ 198 (348)
+.+.
T Consensus 168 P~D~ 171 (414)
T KOG1283|consen 168 PEDF 171 (414)
T ss_pred hhHh
Confidence 5543
No 207
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.98 E-value=0.0016 Score=46.96 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 139 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 139 ~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
.+.+.+.++.+..+ .+..++++.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~--~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEK--YPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--ccCccchhhccchHHHHHHHHHHh
Confidence 33444444444433 223489999999999999988765
No 208
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.97 E-value=0.019 Score=50.51 Aligned_cols=126 Identities=21% Similarity=0.222 Sum_probs=78.6
Q ss_pred ecCCCc--eeEEEEeccCCCCCceeEEEEecCCCcccccchh----HHHHHHhCCceEEeecCCCCccCCC--CCCCCCC
Q 018984 63 VNSRGV--EIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEG----TARKLASSGYGVFAMDYPGFGLSAG--LHGYIPS 134 (348)
Q Consensus 63 ~~~~g~--~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~----~~~~l~~~g~~vi~~D~~G~G~s~~--~~~~~~~ 134 (348)
...++. .|.+.++.|.+=+. -++.+-|.|......+.. +...+ .+||.++.=|- ||..+.. ......+
T Consensus 8 ~~~~~~~~~i~fev~LP~~WNg--R~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n 83 (474)
T PF07519_consen 8 HPSDGSAPNIRFEVWLPDNWNG--RFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNN 83 (474)
T ss_pred ecCCCCcceEEEEEECChhhcc--CeEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCC
Confidence 344444 89999999983222 366666665444332322 33344 68999999995 6665532 1111112
Q ss_pred h-----------hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCccccc
Q 018984 135 F-----------DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 195 (348)
Q Consensus 135 ~-----------~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 195 (348)
. ...+.--+++++..-.+ ....-+..|.|.||.-++..|+++|+.++++|.-+|....
T Consensus 84 ~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~---~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 84 PEALLDFAYRALHETTVVAKALIEAFYGK---APKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhCC---CCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 2 11222223333333222 3346799999999999999999999999999999997763
No 209
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.96 E-value=0.0016 Score=51.44 Aligned_cols=57 Identities=19% Similarity=0.284 Sum_probs=36.2
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhC-----CCCcceEEEeCcc
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ-----PNAWSGAILVAPM 192 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~-----p~~v~~~vl~~~~ 192 (348)
.+.....++...+..+..+ .++.++++.|||+||.+|..++... +..+..+.+-+|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~--~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQ--YPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHHHHHHhh--CCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 3444455555665555443 4556899999999999999887653 2335544444443
No 210
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.91 E-value=0.041 Score=45.64 Aligned_cols=66 Identities=18% Similarity=0.176 Sum_probs=48.4
Q ss_pred CCCcEEEEecCCCCcCCHHHHHHHHHHhcCCC--ceEEEcCCCCccccc-CCChhHHHHHHHHHHHHHhhhcC
Q 018984 274 VSLPLLILHGENDTVTDPSVSKALYEKASSKD--KKCILYKDAFHSLLE-GEPDDMIIRVFADIISWLDDHSR 343 (348)
Q Consensus 274 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-~~~~~~~~~~~~~i~~fl~~~~~ 343 (348)
...+.+.+++..|.++|.+..+++.+.....+ ++.+-+.++-|..+. ..|.. ..+...+|++....
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~----y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKT----YLKKCSEFLRSVIS 292 (350)
T ss_pred ccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHH----HHHHHHHHHHhccc
Confidence 35688999999999999999998866654344 444455677787654 35655 88888999887654
No 211
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.73 E-value=0.057 Score=38.70 Aligned_cols=81 Identities=20% Similarity=0.235 Sum_probs=51.5
Q ss_pred CceeEEEEecCCCcccccchhHHHHHHhCCce-EEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCe
Q 018984 82 PKGLVCYCHGYGDTCTFFFEGTARKLASSGYG-VFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPS 160 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~-vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 160 (348)
+...||+.-|+|..++. ...+ ....++. ++++|+...... .++. +.+ .+
T Consensus 10 gd~LIvyFaGwgtpps~-v~HL---ilpeN~dl~lcYDY~dl~ld-------fDfs--------Ay~-----------hi 59 (214)
T COG2830 10 GDHLIVYFAGWGTPPSA-VNHL---ILPENHDLLLCYDYQDLNLD-------FDFS--------AYR-----------HI 59 (214)
T ss_pred CCEEEEEEecCCCCHHH-Hhhc---cCCCCCcEEEEeehhhcCcc-------cchh--------hhh-----------hh
Confidence 34589999999877654 3332 2234454 577888643211 1111 112 46
Q ss_pred EEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 161 FLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
-+|++|||-.+|-++....+ ++..+.+++..-
T Consensus 60 rlvAwSMGVwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 60 RLVAWSMGVWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred hhhhhhHHHHHHHHHHhhcc--ccceeeecCCCC
Confidence 79999999999999988765 677777776543
No 212
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.56 E-value=0.022 Score=51.55 Aligned_cols=119 Identities=19% Similarity=0.191 Sum_probs=65.2
Q ss_pred eEEEEeccCCCCC--ceeEEEEecCCCcccc---c-chhHHHHHHhCCceEEeecCCC----CccCC--CCCCCCCChhH
Q 018984 70 IFCKSWLPETSQP--KGLVCYCHGYGDTCTF---F-FEGTARKLASSGYGVFAMDYPG----FGLSA--GLHGYIPSFDR 137 (348)
Q Consensus 70 l~~~~~~p~~~~~--~~~vv~~HG~~~~~~~---~-~~~~~~~l~~~g~~vi~~D~~G----~G~s~--~~~~~~~~~~~ 137 (348)
|+.-+|.|..... .|++|++||++..... + .......+..+..-|+.+.+|- +.... ..++. ..+.
T Consensus 97 LylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN-~gl~- 174 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGN-LGLF- 174 (545)
T ss_pred ceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCc-ccHH-
Confidence 4555566654433 6999999998632221 1 1122233334457778888772 21111 11111 2333
Q ss_pred HHHHHHHHHHHHHcC---CCCCCCCeEEEEeChhHHHHHHHHHh--CCCCcceEEEeCccc
Q 018984 138 LVDDVIEHYSNIKEY---PEFRTLPSFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMC 193 (348)
Q Consensus 138 ~~~d~~~~l~~l~~~---~~~~~~~v~l~GhS~Gg~~a~~~a~~--~p~~v~~~vl~~~~~ 193 (348)
|...+++|+... .+-+..+|.|+|||.||..+..+... ....+..+|.+++..
T Consensus 175 ---Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 175 ---DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred ---HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 455555555433 22344589999999999998776542 124566666666543
No 213
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.47 E-value=0.5 Score=40.85 Aligned_cols=122 Identities=23% Similarity=0.169 Sum_probs=71.6
Q ss_pred eeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccch--hHHHHHHhCCceE-EeecCCCCccCCCCCCCCCCh
Q 018984 59 ESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFE--GTARKLASSGYGV-FAMDYPGFGLSAGLHGYIPSF 135 (348)
Q Consensus 59 ~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~--~~~~~l~~~g~~v-i~~D~~G~G~s~~~~~~~~~~ 135 (348)
...+.+..+..+.|.. -|. .-..|..|+.-|+-..-. +. .+++.| |... +.-|.|--|.+--. .-
T Consensus 267 G~r~~D~~reEi~yYF-nPG-D~KPPL~VYFSGyR~aEG--FEgy~MMk~L---g~PfLL~~DpRleGGaFYl-----Gs 334 (511)
T TIGR03712 267 GQRLVDSKRQEFIYYF-NPG-DFKPPLNVYFSGYRPAEG--FEGYFMMKRL---GAPFLLIGDPRLEGGAFYL-----GS 334 (511)
T ss_pred CceEecCCCCeeEEec-CCc-CCCCCeEEeeccCcccCc--chhHHHHHhc---CCCeEEeeccccccceeee-----Cc
Confidence 3444555666666643 333 334688999999865322 22 233444 4444 44577766655322 22
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
+++-+.+.++|+......++....++|-|-|||..-|+.+++... ..++|+--|...
T Consensus 335 ~eyE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 335 DEYEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 223334444444443334455668999999999999999998754 356666656554
No 214
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.40 E-value=0.013 Score=48.90 Aligned_cols=109 Identities=16% Similarity=0.095 Sum_probs=82.6
Q ss_pred CCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCC--CCChhHHHHHHHHHHHHHHcCCCCCC
Q 018984 80 SQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGY--IPSFDRLVDDVIEHYSNIKEYPEFRT 157 (348)
Q Consensus 80 ~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~--~~~~~~~~~d~~~~l~~l~~~~~~~~ 157 (348)
+...|+|++.-|++.............| +-+-+.+++|-++.|.+.+.. .-++.+.+.|...+++.++.- +++
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i--Y~~ 134 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI--YPG 134 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh--ccC
Confidence 3447899999999865443233444444 246799999999999765432 137888999999999999765 333
Q ss_pred CCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 158 LPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 158 ~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
+.+=-|-|=||+.++.+=.-+|+.|++.|....+.+
T Consensus 135 -kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 135 -KWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred -CceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 799999999999999888889999999887765543
No 215
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.39 E-value=0.0074 Score=45.93 Aligned_cols=73 Identities=23% Similarity=0.194 Sum_probs=45.5
Q ss_pred HHHHhCCceEEeecCCCCccCCCC----CCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhC
Q 018984 105 RKLASSGYGVFAMDYPGFGLSAGL----HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 105 ~~l~~~g~~vi~~D~~G~G~s~~~----~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
..|... .+|++|=+|-.....-. .....-++--..|+.++.++...+. ..+++++|+|||.|+.+..++..++
T Consensus 40 s~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~-n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY-NNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc-CCCCCEEEEEeChHHHHHHHHHHHH
Confidence 344334 67888888854322111 0010123333567777777665553 3566999999999999999998764
No 216
>PLN02454 triacylglycerol lipase
Probab=96.12 E-value=0.017 Score=48.81 Aligned_cols=42 Identities=19% Similarity=0.235 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 137 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 137 ~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
...+++...++.+.........+|++.|||+||.+|+..|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 345566666666655421111249999999999999998854
No 217
>PLN02162 triacylglycerol lipase
Probab=96.07 E-value=0.018 Score=49.31 Aligned_cols=22 Identities=41% Similarity=0.543 Sum_probs=18.7
Q ss_pred CCCCeEEEEeChhHHHHHHHHH
Q 018984 156 RTLPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 156 ~~~~v~l~GhS~Gg~~a~~~a~ 177 (348)
++.++++.|||+||.+|..+|.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 4458999999999999998764
No 218
>PLN00413 triacylglycerol lipase
Probab=95.99 E-value=0.021 Score=49.01 Aligned_cols=22 Identities=41% Similarity=0.477 Sum_probs=19.0
Q ss_pred CCCCeEEEEeChhHHHHHHHHH
Q 018984 156 RTLPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 156 ~~~~v~l~GhS~Gg~~a~~~a~ 177 (348)
++.++++.|||+||.+|..+|.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHH
Confidence 4458999999999999998874
No 219
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.87 E-value=0.022 Score=38.85 Aligned_cols=39 Identities=10% Similarity=0.128 Sum_probs=23.3
Q ss_pred eeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccc
Q 018984 59 ESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF 98 (348)
Q Consensus 59 ~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~ 98 (348)
.++.+..+|..|++....+.+. ...+|||+||++++--.
T Consensus 69 phf~t~I~g~~iHFih~rs~~~-~aiPLll~HGWPgSf~E 107 (112)
T PF06441_consen 69 PHFKTEIDGLDIHFIHVRSKRP-NAIPLLLLHGWPGSFLE 107 (112)
T ss_dssp -EEEEEETTEEEEEEEE--S-T-T-EEEEEE--SS--GGG
T ss_pred CCeeEEEeeEEEEEEEeeCCCC-CCeEEEEECCCCccHHh
Confidence 4567777899999988766433 35679999999988543
No 220
>PLN02310 triacylglycerol lipase
Probab=95.70 E-value=0.039 Score=46.70 Aligned_cols=21 Identities=38% Similarity=0.499 Sum_probs=18.1
Q ss_pred CCeEEEEeChhHHHHHHHHHh
Q 018984 158 LPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 158 ~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
.+|++.|||+||.+|+..|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 379999999999999988743
No 221
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.67 E-value=0.028 Score=41.91 Aligned_cols=66 Identities=20% Similarity=0.268 Sum_probs=48.8
Q ss_pred CCcEEEEecCCCCcCCHHHHHHHHHHhc---CCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 275 SLPLLILHGENDTVTDPSVSKALYEKAS---SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 275 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
++++|-|-|+.|.++...+.....+... ......++.+|+||+-.. ....+.+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF-~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLF-NGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecc-cchhhhhhhhHHHHHHHHhC
Confidence 5678889999999999877666554442 234567788999998665 33445667999999999764
No 222
>PLN02571 triacylglycerol lipase
Probab=95.53 E-value=0.029 Score=47.60 Aligned_cols=20 Identities=30% Similarity=0.368 Sum_probs=17.9
Q ss_pred CeEEEEeChhHHHHHHHHHh
Q 018984 159 PSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~ 178 (348)
+|++.|||+||.+|...|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 68999999999999988764
No 223
>PLN02408 phospholipase A1
Probab=95.38 E-value=0.032 Score=46.58 Aligned_cols=20 Identities=30% Similarity=0.346 Sum_probs=17.8
Q ss_pred CeEEEEeChhHHHHHHHHHh
Q 018984 159 PSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~ 178 (348)
+|++.|||+||.+|...|..
T Consensus 201 sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYD 220 (365)
T ss_pred eEEEeccchHHHHHHHHHHH
Confidence 59999999999999988764
No 224
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.34 E-value=0.054 Score=45.05 Aligned_cols=41 Identities=22% Similarity=0.230 Sum_probs=31.1
Q ss_pred CCCCCeEEEEeChhHHHHHHHHHhCCC-----CcceEEEeCccccc
Q 018984 155 FRTLPSFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPMCKI 195 (348)
Q Consensus 155 ~~~~~v~l~GhS~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~ 195 (348)
...+||.|+|||+|+.+....+....+ .|+.+++++.+...
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 356689999999999998876654332 37899999876643
No 225
>PLN02324 triacylglycerol lipase
Probab=95.08 E-value=0.044 Score=46.46 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
+.+.+.++.+.........+|++.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 344444444443321112369999999999999988753
No 226
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.95 E-value=0.042 Score=47.72 Aligned_cols=39 Identities=26% Similarity=0.325 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 138 LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 138 ~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
..+++..+++..... ....++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~--ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDR--GEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhcccc--CCcceEEEeccCHHHHHHHHHHHH
Confidence 344555555544321 112369999999999999988743
No 227
>PLN02934 triacylglycerol lipase
Probab=94.76 E-value=0.045 Score=47.44 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=23.7
Q ss_pred HHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHH
Q 018984 142 VIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 142 ~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~ 177 (348)
+...++.+..+ .++.++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~--~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKE--HKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHH--CCCCeEEEeccccHHHHHHHHHH
Confidence 33344443333 34558999999999999998874
No 228
>PLN02802 triacylglycerol lipase
Probab=94.67 E-value=0.059 Score=46.76 Aligned_cols=20 Identities=40% Similarity=0.424 Sum_probs=17.7
Q ss_pred CeEEEEeChhHHHHHHHHHh
Q 018984 159 PSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~ 178 (348)
+|++.|||+||.+|...|..
T Consensus 331 sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 331 SITVTGHSLGAALALLVADE 350 (509)
T ss_pred eEEEeccchHHHHHHHHHHH
Confidence 68999999999999987754
No 229
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.57 E-value=0.046 Score=45.72 Aligned_cols=89 Identities=20% Similarity=0.210 Sum_probs=45.6
Q ss_pred CCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCC-CCCCCCCh-hHHHHHHHHHHHHHHcCCCCCCC
Q 018984 81 QPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAG-LHGYIPSF-DRLVDDVIEHYSNIKEYPEFRTL 158 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~-~~~~~~~~-~~~~~d~~~~l~~l~~~~~~~~~ 158 (348)
++.-.||+.||+-+....+|...+....+. +.=..+..+|.-.... .......+ ...++++.+.+......
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~------ 150 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIE------ 150 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccc------
Confidence 446789999999772222355555555544 2111333333321111 11110111 12234444444443333
Q ss_pred CeEEEEeChhHHHHHHHH
Q 018984 159 PSFLFGQSLGGAVALKVH 176 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a 176 (348)
++-++|||+||.++..+.
T Consensus 151 kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARYAI 168 (405)
T ss_pred eeeeeeeecCCeeeeEEE
Confidence 899999999999876543
No 230
>PLN02847 triacylglycerol lipase
Probab=94.42 E-value=0.08 Score=46.85 Aligned_cols=24 Identities=25% Similarity=0.412 Sum_probs=20.0
Q ss_pred CCCCCeEEEEeChhHHHHHHHHHh
Q 018984 155 FRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 155 ~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
+++-+++++|||+||.+|..++..
T Consensus 248 ~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCCeEEEeccChHHHHHHHHHHH
Confidence 445589999999999999987754
No 231
>PLN02761 lipase class 3 family protein
Probab=94.33 E-value=0.076 Score=46.24 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=17.7
Q ss_pred CCeEEEEeChhHHHHHHHHH
Q 018984 158 LPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 158 ~~v~l~GhS~Gg~~a~~~a~ 177 (348)
.+|++.|||+||.+|...|.
T Consensus 294 ~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAY 313 (527)
T ss_pred ceEEEeccchHHHHHHHHHH
Confidence 37999999999999998774
No 232
>PLN02753 triacylglycerol lipase
Probab=94.23 E-value=0.088 Score=45.93 Aligned_cols=21 Identities=38% Similarity=0.520 Sum_probs=18.5
Q ss_pred CCCeEEEEeChhHHHHHHHHH
Q 018984 157 TLPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 157 ~~~v~l~GhS~Gg~~a~~~a~ 177 (348)
+.+|++.|||+||.+|...|.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred CceEEEEccCHHHHHHHHHHH
Confidence 348999999999999998874
No 233
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.00 E-value=0.13 Score=40.81 Aligned_cols=48 Identities=19% Similarity=0.362 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCc
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 191 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~ 191 (348)
.+..+++..++.. ++..++.+-|||+||.+|..+..++. +-.+.+-+|
T Consensus 260 Sa~ldI~~~v~~~--Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 260 SAALDILGAVRRI--YPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHHHh--CCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3444444444443 56668999999999999999988775 344444444
No 234
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.00 E-value=0.13 Score=40.81 Aligned_cols=48 Identities=19% Similarity=0.362 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCc
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 191 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~ 191 (348)
.+..+++..++.. ++..++.+-|||+||.+|..+..++. +-.+.+-+|
T Consensus 260 Sa~ldI~~~v~~~--Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 260 SAALDILGAVRRI--YPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHHHh--CCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3444444444443 56668999999999999999988775 344444444
No 235
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.87 E-value=0.33 Score=46.73 Aligned_cols=96 Identities=20% Similarity=0.239 Sum_probs=59.7
Q ss_pred CceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeE
Q 018984 82 PKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSF 161 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~ 161 (348)
..|++.|+|..-+.... +..++..| ..|.+|.-........++++.+.-...-++.+.. ..+..
T Consensus 2122 e~~~~Ffv~pIEG~tt~-l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP-----~GPYr 2185 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTA-LESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQP-----EGPYR 2185 (2376)
T ss_pred cCCceEEEeccccchHH-HHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCC-----CCCee
Confidence 36789999998765443 44444433 2234443222222223777776665555555433 34889
Q ss_pred EEEeChhHHHHHHHHHhC--CCCcceEEEeCccc
Q 018984 162 LFGQSLGGAVALKVHLKQ--PNAWSGAILVAPMC 193 (348)
Q Consensus 162 l~GhS~Gg~~a~~~a~~~--p~~v~~~vl~~~~~ 193 (348)
++|+|+|+.++..+|... .+....+|++++..
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999999988653 23356688887654
No 236
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.82 E-value=0.17 Score=36.90 Aligned_cols=36 Identities=17% Similarity=0.348 Sum_probs=32.9
Q ss_pred CeEEEEeChhHHHHHHHHHhCCCCcceEEEeCcccc
Q 018984 159 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 194 (348)
..++-|.||||..|..+.-++|+.+.++|.+++..+
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 568899999999999999999999999999998764
No 237
>PLN02719 triacylglycerol lipase
Probab=93.57 E-value=0.13 Score=44.72 Aligned_cols=20 Identities=40% Similarity=0.529 Sum_probs=17.8
Q ss_pred CCeEEEEeChhHHHHHHHHH
Q 018984 158 LPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 158 ~~v~l~GhS~Gg~~a~~~a~ 177 (348)
.+|++.|||+||.+|...|.
T Consensus 298 ~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 37999999999999998775
No 238
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.23 E-value=0.54 Score=36.87 Aligned_cols=64 Identities=30% Similarity=0.369 Sum_probs=38.3
Q ss_pred CceEEeecCCCC-c-cCC-CCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 111 GYGVFAMDYPGF-G-LSA-GLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 111 g~~vi~~D~~G~-G-~s~-~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
|+.+..+++|.. + .+. .......+..+-++.+.+.++.... .+.+++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~----~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA----AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc----CCCCEEEEEECHHHHHHHHHHHH
Confidence 566777777762 1 000 1111223555555556665554322 34489999999999999887655
No 239
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.90 E-value=0.15 Score=42.85 Aligned_cols=22 Identities=36% Similarity=0.542 Sum_probs=18.9
Q ss_pred CCCeEEEEeChhHHHHHHHHHh
Q 018984 157 TLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 157 ~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
+-+|.+-|||+||.+|...|..
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHH
Confidence 4489999999999999988754
No 240
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=92.37 E-value=0.5 Score=39.21 Aligned_cols=48 Identities=19% Similarity=0.376 Sum_probs=39.8
Q ss_pred cCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCccccc
Q 018984 272 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 320 (348)
Q Consensus 272 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 320 (348)
.++..|-.++.|..|.+.+++.+.-.++.+++ ...+..+|+..|....
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~n 373 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLIN 373 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhhH
Confidence 57789999999999999999999888999942 2467788999998654
No 241
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=91.82 E-value=1.9 Score=28.77 Aligned_cols=84 Identities=12% Similarity=0.069 Sum_probs=52.3
Q ss_pred cchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhH--HHHHHHH
Q 018984 99 FFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGG--AVALKVH 176 (348)
Q Consensus 99 ~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg--~~a~~~a 176 (348)
.+..+.+.+...|+..-.+.++..|.+....-....-+.-...+..+++. +++.+++++|-|--. -+-..++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~------fP~~kfiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRD------FPERKFILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHH------CCCCcEEEEeeCCCcCHHHHHHHH
Confidence 46667777767788777788887765532211100112224445555554 455599999999554 3444578
Q ss_pred HhCCCCcceEEE
Q 018984 177 LKQPNAWSGAIL 188 (348)
Q Consensus 177 ~~~p~~v~~~vl 188 (348)
.++|++|.++.+
T Consensus 86 ~~~P~~i~ai~I 97 (100)
T PF09949_consen 86 RRFPGRILAIYI 97 (100)
T ss_pred HHCCCCEEEEEE
Confidence 899999988764
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.80 E-value=0.35 Score=42.76 Aligned_cols=55 Identities=24% Similarity=0.315 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh-----CCC------CcceEEEeCcc
Q 018984 138 LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK-----QPN------AWSGAILVAPM 192 (348)
Q Consensus 138 ~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~-----~p~------~v~~~vl~~~~ 192 (348)
.+.-..++++.+....-.++++|+.+||||||.++=.+... .|+ ..+|+|+++.+
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 33444455555544322246689999999999887665432 232 36777777754
No 243
>PF03283 PAE: Pectinacetylesterase
Probab=90.79 E-value=1.1 Score=38.06 Aligned_cols=53 Identities=15% Similarity=0.030 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHH----HhCCCCcceEEEeCc
Q 018984 139 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVH----LKQPNAWSGAILVAP 191 (348)
Q Consensus 139 ~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a----~~~p~~v~~~vl~~~ 191 (348)
..-+.++++++..+.-....+|+|.|.|.||.-++..+ ...|..++-..+.++
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 34566777777665112234799999999999988654 446654444444444
No 244
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.31 E-value=0.63 Score=41.16 Aligned_cols=69 Identities=16% Similarity=0.292 Sum_probs=50.9
Q ss_pred cCCCCcEEEEecCCCCcCCHHHHHHHHHHhcC----C------CceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhh
Q 018984 272 EKVSLPLLILHGENDTVTDPSVSKALYEKASS----K------DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 272 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
++-.-.+++.||..|.++|+.....+++++.. . -.++..+||.+|..--.-+..+ ..+..|.+|+++-
T Consensus 350 ~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~--d~l~aL~~WVE~G 427 (474)
T PF07519_consen 350 RARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPF--DALTALVDWVENG 427 (474)
T ss_pred HhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCC--CHHHHHHHHHhCC
Confidence 33457899999999999999888888777641 1 2478889999998654422221 3899999999864
Q ss_pred c
Q 018984 342 S 342 (348)
Q Consensus 342 ~ 342 (348)
.
T Consensus 428 ~ 428 (474)
T PF07519_consen 428 K 428 (474)
T ss_pred C
Confidence 4
No 245
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=90.01 E-value=3.1 Score=34.03 Aligned_cols=95 Identities=16% Similarity=0.098 Sum_probs=51.5
Q ss_pred eeEEEEecCCCcccccc-----hhHHHHH-HhCCceEEeecCCCCccC--------CCCCC--CCCCh-hHHHHHHHHHH
Q 018984 84 GLVCYCHGYGDTCTFFF-----EGTARKL-ASSGYGVFAMDYPGFGLS--------AGLHG--YIPSF-DRLVDDVIEHY 146 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~-----~~~~~~l-~~~g~~vi~~D~~G~G~s--------~~~~~--~~~~~-~~~~~d~~~~l 146 (348)
..|||+-|.+.+...-. ..+.+.+ ...+-..+++=.+|-|.. ..... ....+ ....+.+...+
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 46777777765443211 2344444 222334455556677661 11100 00011 22344555556
Q ss_pred HHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhC
Q 018984 147 SNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 147 ~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
.++.... .++.+|.++|+|-|+.+|-.++..-
T Consensus 82 ~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNY-EPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhcc-CCcceEEEEecCccHHHHHHHHHHH
Confidence 6665443 3555899999999999999998653
No 246
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=88.49 E-value=6.2 Score=32.45 Aligned_cols=97 Identities=20% Similarity=0.000 Sum_probs=59.6
Q ss_pred CCceeEEEEecCCC----cccccchhHHHHHHh-CCceEEeecCCCCccCCCCC------C----CCCC--hhHHHHHHH
Q 018984 81 QPKGLVCYCHGYGD----TCTFFFEGTARKLAS-SGYGVFAMDYPGFGLSAGLH------G----YIPS--FDRLVDDVI 143 (348)
Q Consensus 81 ~~~~~vv~~HG~~~----~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~~------~----~~~~--~~~~~~d~~ 143 (348)
.++..|+++-|... ..-.-.-.+...|.. .+-+++++=-+|.|.-.-.. . ...+ -..+.+.+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 44778888888532 211112234555654 57888888888887542110 0 0000 123456677
Q ss_pred HHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 144 EHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 144 ~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
.+...|..... ++++|+++|+|-|+.+|-.+|..
T Consensus 109 ~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHH
Confidence 77777776644 55689999999999999888865
No 247
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=83.66 E-value=7.5 Score=34.09 Aligned_cols=143 Identities=19% Similarity=0.191 Sum_probs=64.9
Q ss_pred eEEEEeccC-CCCCceeEEEEecCCCcccc--cchhHHHHHHhC-CceEEeecCCC-------CccCCCCCCCCCChhHH
Q 018984 70 IFCKSWLPE-TSQPKGLVCYCHGYGDTCTF--FFEGTARKLASS-GYGVFAMDYPG-------FGLSAGLHGYIPSFDRL 138 (348)
Q Consensus 70 l~~~~~~p~-~~~~~~~vv~~HG~~~~~~~--~~~~~~~~l~~~-g~~vi~~D~~G-------~G~s~~~~~~~~~~~~~ 138 (348)
|+.-+|.|. +.....++|.+-|+|.-... .--.=.+.|+.. +.-|+.+++|= .+.....++...-+++.
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQq 200 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQ 200 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHH
Confidence 455667773 33335578888887632211 011112345443 34455566551 11122222222122222
Q ss_pred --HHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHH-HHHH-hCCCCcceEEEeCccccccccCCChHHHHHHHHHHHh
Q 018984 139 --VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVAL-KVHL-KQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN 214 (348)
Q Consensus 139 --~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~-~~a~-~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (348)
...+.+-|...+. +..+|.|+|-|.|+.-.. ++.+ .-...++..|+-++...-.-....+.........+..
T Consensus 201 LAl~WV~~Ni~aFGG----np~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~pWA~~s~~~A~~~s~~La~ 276 (601)
T KOG4389|consen 201 LALQWVQENIAAFGG----NPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNNPWAIVSPGEARQRSTALAN 276 (601)
T ss_pred HHHHHHHHhHHHhCC----CcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCCCccccChHHHHHHHHHHHH
Confidence 2233333333332 344899999999986543 2322 1112466677666554433333334444444444443
Q ss_pred hc
Q 018984 215 IL 216 (348)
Q Consensus 215 ~~ 216 (348)
..
T Consensus 277 lv 278 (601)
T KOG4389|consen 277 LV 278 (601)
T ss_pred Hh
Confidence 33
No 248
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=81.70 E-value=4.1 Score=34.79 Aligned_cols=70 Identities=19% Similarity=0.252 Sum_probs=46.1
Q ss_pred HHHHhccCCCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCC-ChhHHHHHHHHHHHHHh
Q 018984 266 GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE-PDDMIIRVFADIISWLD 339 (348)
Q Consensus 266 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~i~~fl~ 339 (348)
++...+.+-.-.+|+|+|++|++.-.... +.+ ...+..+.+.||++|...... |+.........|.+|-.
T Consensus 342 dI~~Wvr~~~~rmlFVYG~nDPW~A~~f~--l~~--g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 342 DIDRWVRNNGPRMLFVYGENDPWSAEPFR--LGK--GKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHHHHHhCCCeEEEEeCCCCCcccCccc--cCC--CCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 34444555566899999999998643211 111 125677788899999865543 34445668888889964
No 249
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.36 E-value=4.1 Score=35.73 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=30.6
Q ss_pred CCCCCeEEEEeChhHHHHHHHHHh-----CCCCcceEEEeCccccc
Q 018984 155 FRTLPSFLFGQSLGGAVALKVHLK-----QPNAWSGAILVAPMCKI 195 (348)
Q Consensus 155 ~~~~~v~l~GhS~Gg~~a~~~a~~-----~p~~v~~~vl~~~~~~~ 195 (348)
.+.+||.|+|+|+|+.+....... .-..|..+++++.+...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 456799999999999998865542 22358889999876643
No 250
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=76.91 E-value=14 Score=28.35 Aligned_cols=43 Identities=21% Similarity=0.335 Sum_probs=29.4
Q ss_pred CCCceeEEEEecCCCcccccchhHHHHHHhCCc-eEEeecCCCC
Q 018984 80 SQPKGLVCYCHGYGDTCTFFFEGTARKLASSGY-GVFAMDYPGF 122 (348)
Q Consensus 80 ~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~ 122 (348)
.+...+|++.||...++...|.-+-..|.+.|| .|++...-|+
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y 178 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY 178 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC
Confidence 344678999999887766556666666777788 6666554443
No 251
>PRK12467 peptide synthase; Provisional
Probab=76.63 E-value=31 Score=40.16 Aligned_cols=98 Identities=17% Similarity=-0.025 Sum_probs=64.5
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEE
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFL 162 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 162 (348)
.+.+++.|+..+.... +..+...+. .+..++.+..++.-.... ...+++..+....+.+.+.... .+..+
T Consensus 3692 ~~~l~~~h~~~r~~~~-~~~l~~~l~-~~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~~-----~p~~l 3761 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFD-YEPLAVILE-GDRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQAK-----GPYGL 3761 (3956)
T ss_pred ccceeeechhhcchhh-hHHHHHHhC-CCCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhccC-----CCeee
Confidence 4569999998877553 566766663 346788877665422111 1136777777777777765443 26899
Q ss_pred EEeChhHHHHHHHHHh---CCCCcceEEEeC
Q 018984 163 FGQSLGGAVALKVHLK---QPNAWSGAILVA 190 (348)
Q Consensus 163 ~GhS~Gg~~a~~~a~~---~p~~v~~~vl~~ 190 (348)
.|+|+||.++..++.. ..+.+..+.++.
T Consensus 3762 ~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3762 LGWSLGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred eeeecchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999999999887754 344556555554
No 252
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=72.70 E-value=24 Score=28.32 Aligned_cols=41 Identities=10% Similarity=0.004 Sum_probs=26.2
Q ss_pred CCCceeEEEEecCCCcccccchhHHHHHHhCCce-EEeecCC
Q 018984 80 SQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYG-VFAMDYP 120 (348)
Q Consensus 80 ~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~-vi~~D~~ 120 (348)
+++.+.|++++-.++....+.....+.|.+.|+. |-.++.+
T Consensus 25 g~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 25 GGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 3445678899866554444455666777777884 5556654
No 253
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=72.65 E-value=14 Score=28.49 Aligned_cols=38 Identities=13% Similarity=0.159 Sum_probs=29.2
Q ss_pred ceeEEEEecCCCcccc--cchhHHHHHHhCCceEEeecCC
Q 018984 83 KGLVCYCHGYGDTCTF--FFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~--~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
.+.|.|++-.+...+. |-....+.|.+.|..+..+++-
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 5679999988877664 4566778888899988888764
No 254
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=72.43 E-value=59 Score=28.20 Aligned_cols=102 Identities=14% Similarity=0.083 Sum_probs=62.2
Q ss_pred eEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCC---------CC-------------ChhHHHHHH
Q 018984 85 LVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGY---------IP-------------SFDRLVDDV 142 (348)
Q Consensus 85 ~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~---------~~-------------~~~~~~~d~ 142 (348)
+|+++ |...++..-+..+.+.+.+.|..++.+|.-=.|.......- .. .++.+.+-+
T Consensus 3 tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 34444 55555543366677788889999999997555443322100 00 122334445
Q ss_pred HHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEe
Q 018984 143 IEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILV 189 (348)
Q Consensus 143 ~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~ 189 (348)
..++..+..+..+. -|+-+|-|.|..++.......|--+-++++.
T Consensus 82 ~~~v~~l~~~g~i~--Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 82 ARFVSDLYDEGKID--GVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHhcCCcc--EEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 55555555443222 3788999999999999998888666665543
No 255
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=72.29 E-value=22 Score=30.77 Aligned_cols=37 Identities=22% Similarity=0.213 Sum_probs=28.5
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLS 125 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s 125 (348)
|||+|+..-. . |+.+++.|.++|+.|..+-..+.+..
T Consensus 2 il~~~~~~p~--~-~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFPG--Q-FRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCch--h-HHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 7899876432 2 78899999999999988877666543
No 256
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=71.51 E-value=13 Score=23.25 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCC-CCeEEEEeChhHHHHHHHHHhCC
Q 018984 135 FDRLVDDVIEHYSNIKEYPEFRT-LPSFLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 135 ~~~~~~d~~~~l~~l~~~~~~~~-~~v~l~GhS~Gg~~a~~~a~~~p 180 (348)
.....+.+.+.+++.+.+....+ .++.++|-|.|=.+|.+.+..+.
T Consensus 16 P~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 16 PVGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 34455667777777776544433 47889999999889888777653
No 257
>PRK02399 hypothetical protein; Provisional
Probab=69.66 E-value=75 Score=27.59 Aligned_cols=101 Identities=16% Similarity=0.101 Sum_probs=58.8
Q ss_pred EEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCC---------CCCC-------------hhHHHHHHHH
Q 018984 87 CYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHG---------YIPS-------------FDRLVDDVIE 144 (348)
Q Consensus 87 v~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~---------~~~~-------------~~~~~~d~~~ 144 (348)
|++=|...++..-+..+.+.+.+.|..|+.+|.-..|....+.. ...+ ++.+.+-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 44446665654435566677777799999999844442211100 0001 1223334444
Q ss_pred HHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEe
Q 018984 145 HYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILV 189 (348)
Q Consensus 145 ~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~ 189 (348)
++..+..+..+. -++-+|-|.|..++.......|--+-++++.
T Consensus 86 ~v~~L~~~g~i~--gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVRELYERGDVA--GVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHhcCCcc--EEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 554444432222 4788999999999999988888666555543
No 258
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=67.05 E-value=34 Score=26.43 Aligned_cols=72 Identities=11% Similarity=-0.009 Sum_probs=45.9
Q ss_pred HHHHHHhCCc-eEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCh----hHHHHHHHHH
Q 018984 103 TARKLASSGY-GVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSL----GGAVALKVHL 177 (348)
Q Consensus 103 ~~~~l~~~g~-~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~----Gg~~a~~~a~ 177 (348)
....+...|. .|+..|.++... ++.+.+++-+.++++.... .++|+|+|. |..++-.+|.
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~~--------~~~e~~a~al~~~i~~~~p-------~lVL~~~t~~~~~grdlaprlAa 132 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFAG--------ADTLATAKALAAAIKKIGV-------DLILTGKQSIDGDTGQVGPLLAE 132 (202)
T ss_pred HHHHHHHcCCCEEEEEecccccC--------CChHHHHHHHHHHHHHhCC-------CEEEEcCCcccCCcCcHHHHHHH
Confidence 3344445565 677777653321 3667777777777765432 689999998 8889998888
Q ss_pred hCCC-CcceEEEe
Q 018984 178 KQPN-AWSGAILV 189 (348)
Q Consensus 178 ~~p~-~v~~~vl~ 189 (348)
+..- .+..++-+
T Consensus 133 rLga~lvsdv~~l 145 (202)
T cd01714 133 LLGWPQITYVSKI 145 (202)
T ss_pred HhCCCccceEEEE
Confidence 7532 34444443
No 259
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=66.00 E-value=16 Score=33.16 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=43.2
Q ss_pred CC-CCcEEEEecCCCCcCCHHHHHHHHHHhc------CCCceEEEcCCCCcccc-cCCC---h------hHHHHHHHHHH
Q 018984 273 KV-SLPLLILHGENDTVTDPSVSKALYEKAS------SKDKKCILYKDAFHSLL-EGEP---D------DMIIRVFADII 335 (348)
Q Consensus 273 ~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~~~gH~~~-~~~~---~------~~~~~~~~~i~ 335 (348)
++ ..|.++++|..|.++|....-+-+-.+. .....+++++++.|+-. +.-| . .+..+.++.+.
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~ 631 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMW 631 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHH
Confidence 44 6899999999999999765433332221 13567888999989732 2222 1 13344566666
Q ss_pred HHHhhh
Q 018984 336 SWLDDH 341 (348)
Q Consensus 336 ~fl~~~ 341 (348)
.||+.-
T Consensus 632 a~L~~G 637 (690)
T PF10605_consen 632 AHLKSG 637 (690)
T ss_pred HHhhcC
Confidence 777653
No 260
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=63.99 E-value=30 Score=25.58 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=31.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCc
Q 018984 135 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 191 (348)
Q Consensus 135 ~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~ 191 (348)
.++..+++.++++.+..+ +.+|+++|-|..|..-+.++...++.++.++=.+|
T Consensus 50 ~~~~~~~l~~~L~~~~~~----gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 50 VEQSKAELREFLEKLKAE----GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHHT----T--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHHc----CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 344455666666666654 34799999999999988888777777888776655
No 261
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=61.17 E-value=69 Score=25.47 Aligned_cols=38 Identities=18% Similarity=0.108 Sum_probs=26.7
Q ss_pred ceeEEEEecCCCc--ccccchhHHHHHHhCCceEEeecCC
Q 018984 83 KGLVCYCHGYGDT--CTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 83 ~~~vv~~HG~~~~--~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
.|.|+|++=.+.. ...|...+.+.|.+.|+.+..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4669999876633 3334556677787889998888765
No 262
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=60.87 E-value=9.2 Score=26.81 Aligned_cols=65 Identities=22% Similarity=0.160 Sum_probs=34.6
Q ss_pred CCceeEEEEecCCCcccccch-hHHHHHHhCCce---EEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHc
Q 018984 81 QPKGLVCYCHGYGDTCTFFFE-GTARKLASSGYG---VFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKE 151 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~~~-~~~~~l~~~g~~---vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 151 (348)
..+|.|+-+||+.|.+..+.. -+++.|-+.|.. |..+...-| -|.. ..++++-+++...|.....
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~h----FP~~--~~v~~Yk~~L~~~I~~~v~ 118 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHH----FPHN--SNVDEYKEQLKSWIRGNVS 118 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeeccccc----CCCc--hHHHHHHHHHHHHHHHHHH
Confidence 348899999999999876432 234444444421 221111100 0111 2566667777776665544
No 263
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=60.72 E-value=15 Score=27.45 Aligned_cols=22 Identities=23% Similarity=0.220 Sum_probs=18.9
Q ss_pred CeEEEEeChhHHHHHHHHHhCC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p 180 (348)
.-.++|-|.|+.++..++...+
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCCC
Confidence 5589999999999999988654
No 264
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=60.20 E-value=14 Score=29.97 Aligned_cols=38 Identities=24% Similarity=0.282 Sum_probs=27.8
Q ss_pred CCCeEEEEeChhHHHHHHHH---HhCCCCcceEEEeCcccc
Q 018984 157 TLPSFLFGQSLGGAVALKVH---LKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 157 ~~~v~l~GhS~Gg~~a~~~a---~~~p~~v~~~vl~~~~~~ 194 (348)
.-+++|.|.|+|++-+...- ...-+++++.++.+|+..
T Consensus 108 RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred CCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 33799999999988766543 223356999999998653
No 265
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=58.28 E-value=15 Score=30.54 Aligned_cols=21 Identities=14% Similarity=0.186 Sum_probs=18.1
Q ss_pred CeEEEEeChhHHHHHHHHHhC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
.-.++|-|+|+.++..++..+
T Consensus 44 ~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 44 VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 457999999999999998764
No 266
>PLN02748 tRNA dimethylallyltransferase
Probab=58.25 E-value=76 Score=28.34 Aligned_cols=77 Identities=16% Similarity=0.077 Sum_probs=47.9
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhC-CceEEeecC----CCCcc-CC-----------------CCCCCCCChhHHH
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDY----PGFGL-SA-----------------GLHGYIPSFDRLV 139 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~----~G~G~-s~-----------------~~~~~~~~~~~~~ 139 (348)
++.+|++-|-.+++.. .++..|+.+ +..++..|- +|.-- +. ..+...++..++.
T Consensus 21 ~~~~i~i~GptgsGKs---~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F~ 97 (468)
T PLN02748 21 KAKVVVVMGPTGSGKS---KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDFR 97 (468)
T ss_pred CCCEEEEECCCCCCHH---HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHHH
Confidence 4557788887766543 455666654 567888883 33211 00 1122346888999
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeC
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQS 166 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS 166 (348)
++....|+.+.... .-.+|+|-|
T Consensus 98 ~~A~~~I~~I~~rg----k~PIlVGGT 120 (468)
T PLN02748 98 DHAVPLIEEILSRN----GLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHhcC----CCeEEEcCh
Confidence 99999999887652 245677655
No 267
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=57.98 E-value=37 Score=27.52 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=48.8
Q ss_pred CCcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhhhc
Q 018984 275 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 342 (348)
Q Consensus 275 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~~~ 342 (348)
+.|+.++=+. +--....+++.+.+ |+.+++.+-+..+++.-+++++...+..-++.+||.++-
T Consensus 5 ~~~IgvFDSG---VGGLsVlrei~~~L--P~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~ 67 (269)
T COG0796 5 QPPIGVFDSG---VGGLSVLREIRRQL--PDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLERG 67 (269)
T ss_pred CCeEEEEECC---CCcHHHHHHHHHHC--CCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 3466665322 33456778888888 889999999999999999999988888888889887653
No 268
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=57.72 E-value=9.7 Score=31.90 Aligned_cols=19 Identities=37% Similarity=0.455 Sum_probs=16.0
Q ss_pred CeEEEEeChhHHHHHHHHH
Q 018984 159 PSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~ 177 (348)
+-.++|||+|=+.|+.++.
T Consensus 85 P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 85 PDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp ESEEEESTTHHHHHHHHTT
T ss_pred cceeeccchhhHHHHHHCC
Confidence 7789999999988886654
No 269
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=57.68 E-value=16 Score=27.84 Aligned_cols=21 Identities=24% Similarity=0.176 Sum_probs=18.0
Q ss_pred CeEEEEeChhHHHHHHHHHhC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
.-.++|-|.||.+|..++...
T Consensus 28 ~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 28 KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred cceEEEECHHHHHHHHHHcCC
Confidence 358999999999999998754
No 270
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=57.20 E-value=91 Score=24.30 Aligned_cols=82 Identities=13% Similarity=0.029 Sum_probs=47.3
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhC-CceEEeecCCCCccCCCC-----------CCCCCChhHHHHH-----HHHH
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDYPGFGLSAGL-----------HGYIPSFDRLVDD-----VIEH 145 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~s~~~-----------~~~~~~~~~~~~d-----~~~~ 145 (348)
.+.|+|+.=.+.....+...+.+.|.+. |+.+..++... ..+.. .+ -+...+.+. +.++
T Consensus 31 ~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~G--G~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 31 RPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGG--GNTFNLLAQWREHGLDAI 106 (212)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECC--chHHHHHHHHHHcCHHHH
Confidence 4568888776654444466677788888 99988887543 11100 01 022222222 2333
Q ss_pred HHHHHcCCCCCCCCeEEEEeChhHHHHHH
Q 018984 146 YSNIKEYPEFRTLPSFLFGQSLGGAVALK 174 (348)
Q Consensus 146 l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~ 174 (348)
++....+ ...++|.|.|+++...
T Consensus 107 l~~~~~~------g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 107 LKAALER------GVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHC------CCEEEEECHhHHhhCC
Confidence 3333222 4789999999998765
No 271
>PRK10279 hypothetical protein; Provisional
Probab=56.96 E-value=15 Score=30.46 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=18.1
Q ss_pred CeEEEEeChhHHHHHHHHHhC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
.-.++|-|+|+.++..+|...
T Consensus 34 ~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcCC
Confidence 458999999999999998754
No 272
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=56.03 E-value=92 Score=24.42 Aligned_cols=38 Identities=8% Similarity=-0.117 Sum_probs=22.4
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCce-EEeecCC
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYG-VFAMDYP 120 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~-vi~~D~~ 120 (348)
.+.|+++.-.+.....+...+.+.|.+.|+. +..++..
T Consensus 29 ~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 29 GARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred CCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccC
Confidence 4557777665544444455666777666764 5555554
No 273
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=55.95 E-value=14 Score=30.50 Aligned_cols=19 Identities=37% Similarity=0.424 Sum_probs=16.0
Q ss_pred CeEEEEeChhHHHHHHHHH
Q 018984 159 PSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~ 177 (348)
+-.++|||+|-+.|+.++.
T Consensus 83 p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 83 PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred ccEEEecCHHHHHHHHHhC
Confidence 6789999999999887653
No 274
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=55.31 E-value=24 Score=24.24 Aligned_cols=37 Identities=27% Similarity=0.270 Sum_probs=27.4
Q ss_pred EEEEecCCCcccccchhHHHHHHhC-CceEEeecC--CCCccC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDY--PGFGLS 125 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~--~G~G~s 125 (348)
+|++.|.++++.+ .+++.|+++ |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGKS---T~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKS---TLAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHH---HHHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHH---HHHHHHHHHHCCeEEEecceEEecccc
Confidence 6888899888764 577788776 999998887 444433
No 275
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=54.75 E-value=15 Score=30.27 Aligned_cols=20 Identities=35% Similarity=0.253 Sum_probs=16.6
Q ss_pred CCeEEEEeChhHHHHHHHHH
Q 018984 158 LPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 158 ~~v~l~GhS~Gg~~a~~~a~ 177 (348)
.+..++|||+|=+.|+.++.
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCcEEeecCHHHHHHHHHhC
Confidence 37899999999988887653
No 276
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=54.29 E-value=54 Score=25.21 Aligned_cols=72 Identities=18% Similarity=0.209 Sum_probs=44.5
Q ss_pred HHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCC--
Q 018984 103 TARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP-- 180 (348)
Q Consensus 103 ~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p-- 180 (348)
..+.+.++++.++.+|-+|... .-.+..+++.++++.+... .++++=-+..+.-.+..+..+-
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~~~~------~~~LVlsa~~~~~~~~~~~~~~~~ 139 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEALNPD------EVHLVLSATMGQEDLEQALAFYEA 139 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHHSSS------EEEEEEEGGGGGHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhcCCc------cceEEEecccChHHHHHHHHHhhc
Confidence 3445556789999999988642 3345567777777776332 5676666666655555444332
Q ss_pred CCcceEEEe
Q 018984 181 NAWSGAILV 189 (348)
Q Consensus 181 ~~v~~~vl~ 189 (348)
-.++++|+-
T Consensus 140 ~~~~~lIlT 148 (196)
T PF00448_consen 140 FGIDGLILT 148 (196)
T ss_dssp SSTCEEEEE
T ss_pred ccCceEEEE
Confidence 247888864
No 277
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=53.16 E-value=18 Score=30.09 Aligned_cols=22 Identities=23% Similarity=0.138 Sum_probs=18.8
Q ss_pred CeEEEEeChhHHHHHHHHHhCC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p 180 (348)
.-.+.|-|+|+.++..+|....
T Consensus 40 ~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred ccEEEecCHHHHHHHHHHcCCC
Confidence 5689999999999999987543
No 278
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=53.01 E-value=1e+02 Score=25.66 Aligned_cols=74 Identities=9% Similarity=0.137 Sum_probs=47.0
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeec----CCCCcc-CCC-----------------CCCCCCChhHHHHHHH
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMD----YPGFGL-SAG-----------------LHGYIPSFDRLVDDVI 143 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D----~~G~G~-s~~-----------------~~~~~~~~~~~~~d~~ 143 (348)
||++-|-.+++.+ .++-.|++++..+|..| |+|..- +.+ .+...++..++.++..
T Consensus 6 ii~I~GpTasGKS---~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a~ 82 (300)
T PRK14729 6 IVFIFGPTAVGKS---NILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEAL 82 (300)
T ss_pred EEEEECCCccCHH---HHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHHH
Confidence 7777777766654 46667777656888888 333311 111 1223357888899999
Q ss_pred HHHHHHHcCCCCCCCCeEEEEeC
Q 018984 144 EHYSNIKEYPEFRTLPSFLFGQS 166 (348)
Q Consensus 144 ~~l~~l~~~~~~~~~~v~l~GhS 166 (348)
..++.+... +...+|+|-|
T Consensus 83 ~~i~~i~~~----gk~PilvGGT 101 (300)
T PRK14729 83 KIIKELRQQ----KKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHC----CCCEEEEeCc
Confidence 999987665 2245777755
No 279
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=52.32 E-value=22 Score=28.95 Aligned_cols=21 Identities=19% Similarity=0.063 Sum_probs=17.9
Q ss_pred CeEEEEeChhHHHHHHHHHhC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
.-.++|-|+|+.++..+|...
T Consensus 39 ~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 39 IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred ccEEEEECHHHHHHHHHHcCC
Confidence 347999999999999998764
No 280
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=51.91 E-value=25 Score=27.68 Aligned_cols=21 Identities=29% Similarity=0.202 Sum_probs=17.8
Q ss_pred CeEEEEeChhHHHHHHHHHhC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
.-.++|-|.|+.++..++...
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCC
Confidence 347999999999999998754
No 281
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=51.86 E-value=1e+02 Score=23.36 Aligned_cols=37 Identities=27% Similarity=0.424 Sum_probs=28.0
Q ss_pred ceeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecC
Q 018984 83 KGLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDY 119 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~ 119 (348)
++.+|++-|+.+++.+ .-..+.+.|.+.|++++..|-
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 5789999999877653 233455667778999999983
No 282
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=50.73 E-value=77 Score=26.50 Aligned_cols=66 Identities=17% Similarity=0.056 Sum_probs=38.9
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhC-CceEEeecCCCC--ccC---CCC-----------------CCCCCChhHHHH
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDYPGF--GLS---AGL-----------------HGYIPSFDRLVD 140 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~--G~s---~~~-----------------~~~~~~~~~~~~ 140 (348)
+.+|++-|-.+++.. .++..|++. +..++..|-.-. +.+ .++ ....++..++.+
T Consensus 4 ~~~i~i~GptgsGKt---~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 4 PKVIVIVGPTASGKT---ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred ceEEEEECCCCcCHH---HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 457777787776543 566667665 667787776321 110 000 112246777888
Q ss_pred HHHHHHHHHHcC
Q 018984 141 DVIEHYSNIKEY 152 (348)
Q Consensus 141 d~~~~l~~l~~~ 152 (348)
+....++.+..+
T Consensus 81 ~a~~~i~~i~~~ 92 (307)
T PRK00091 81 DALAAIADILAR 92 (307)
T ss_pred HHHHHHHHHHhC
Confidence 888888877554
No 283
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=50.68 E-value=18 Score=28.56 Aligned_cols=34 Identities=21% Similarity=0.420 Sum_probs=25.6
Q ss_pred eeEEEEecCC-CcccccchhHHHHHHhCCceEEeec
Q 018984 84 GLVCYCHGYG-DTCTFFFEGTARKLASSGYGVFAMD 118 (348)
Q Consensus 84 ~~vv~~HG~~-~~~~~~~~~~~~~l~~~g~~vi~~D 118 (348)
..||++|... .+.+ ....+++.|.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~-aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAE-ALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHH-HHHHHHHHHHHCCCEEEEhH
Confidence 4699999753 3333 36788899999999998875
No 284
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=49.71 E-value=26 Score=27.42 Aligned_cols=22 Identities=23% Similarity=0.415 Sum_probs=19.2
Q ss_pred CeEEEEeChhHHHHHHHHHhCC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p 180 (348)
.-.++|.|.|+.+|..++...+
T Consensus 27 ~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 27 PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCEEEEECHHHHHHHHHHcCCc
Confidence 4589999999999999998765
No 285
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=49.22 E-value=1.1 Score=36.59 Aligned_cols=107 Identities=19% Similarity=0.069 Sum_probs=57.6
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEE
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFL 162 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 162 (348)
...++..||...+...........+...+..++..|+++++.+....... .+..-...+...+..... .....++++
T Consensus 88 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~--~~~~~~~~~ 164 (299)
T COG1073 88 GESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILA-GLSLGGPSAGALLAWGPT--RLDASRIVV 164 (299)
T ss_pred cccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEE-EEEeeccchHHHhhcchh--HHHhhcccc
Confidence 34577888875554432222334444567889999999999886442210 111011111122221110 001227899
Q ss_pred EEeChhHHHHHHHHHh----CCCCcceEEEeCcc
Q 018984 163 FGQSLGGAVALKVHLK----QPNAWSGAILVAPM 192 (348)
Q Consensus 163 ~GhS~Gg~~a~~~a~~----~p~~v~~~vl~~~~ 192 (348)
+|.|+||..++..... .++.++.++.-++.
T Consensus 165 ~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (299)
T COG1073 165 WGESLGGALALLLLGANPELARELIDYLITPGGF 198 (299)
T ss_pred eeeccCceeeccccccchHHHHhhhhhhccCCCC
Confidence 9999999999886654 23445555544443
No 286
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=48.16 E-value=21 Score=29.27 Aligned_cols=19 Identities=42% Similarity=0.489 Sum_probs=16.2
Q ss_pred CeEEEEeChhHHHHHHHHH
Q 018984 159 PSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~ 177 (348)
+..++|||+|=+.|+.++.
T Consensus 84 p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 84 PDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCEEeecCHHHHHHHHHhC
Confidence 6789999999998887764
No 287
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=47.56 E-value=32 Score=28.07 Aligned_cols=82 Identities=20% Similarity=0.223 Sum_probs=43.2
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCc-------eEEeecCCCCccCCCCCCCCCChhHHH--------HHHHHHHHHHH
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGY-------GVFAMDYPGFGLSAGLHGYIPSFDRLV--------DDVIEHYSNIK 150 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~-------~vi~~D~~G~G~s~~~~~~~~~~~~~~--------~d~~~~l~~l~ 150 (348)
-|++.|.|...--.-+.+...+.+.|. +++.+|..|-=..+...-. ..-..++ .++.++++.++
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~-~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLT-PFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcch-HHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 344556654432223445555555576 8999999885333221100 0111112 24555555443
Q ss_pred cCCCCCCCCeEEEEeCh-hHHHHHHHH
Q 018984 151 EYPEFRTLPSFLFGQSL-GGAVALKVH 176 (348)
Q Consensus 151 ~~~~~~~~~v~l~GhS~-Gg~~a~~~a 176 (348)
+-+|+|-|- ||.+.-.+.
T Consensus 106 --------ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 106 --------PTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred --------CCEEEEeCCCCCCCCHHHH
Confidence 569999995 776655444
No 288
>PLN02840 tRNA dimethylallyltransferase
Probab=47.42 E-value=1.2e+02 Score=26.60 Aligned_cols=77 Identities=19% Similarity=0.093 Sum_probs=45.3
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhC-CceEEeecCC----CCcc-CCCC-----------------CCCCCChhHHH
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDYP----GFGL-SAGL-----------------HGYIPSFDRLV 139 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~~----G~G~-s~~~-----------------~~~~~~~~~~~ 139 (348)
++.+|++-|-.+++.. .++..|++. +..++..|-. |.-- +.++ +...++..++.
T Consensus 20 ~~~vi~I~GptgsGKT---tla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F~ 96 (421)
T PLN02840 20 KEKVIVISGPTGAGKS---RLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAFF 96 (421)
T ss_pred CCeEEEEECCCCCCHH---HHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHHH
Confidence 4456777777666543 455566554 4567777753 2211 1111 22335788899
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeC
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQS 166 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS 166 (348)
++....++.+..+. ...+|+|-+
T Consensus 97 ~~A~~~I~~i~~rg----kiPIvVGGT 119 (421)
T PLN02840 97 DDARRATQDILNRG----RVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHhcC----CCEEEEcCc
Confidence 99999999887652 234666654
No 289
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=46.16 E-value=33 Score=25.66 Aligned_cols=22 Identities=18% Similarity=0.190 Sum_probs=18.5
Q ss_pred CeEEEEeChhHHHHHHHHHhCC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p 180 (348)
.-.++|-|.|+.++..++...+
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcCCC
Confidence 4579999999999999987654
No 290
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=46.13 E-value=37 Score=24.98 Aligned_cols=37 Identities=24% Similarity=0.414 Sum_probs=25.4
Q ss_pred ceeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecC
Q 018984 83 KGLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDY 119 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~ 119 (348)
++.+|++-|..+++.. .-..+.+.|.+.|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 3679999999887643 233455667678999999973
No 291
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=44.98 E-value=1.7e+02 Score=23.99 Aligned_cols=97 Identities=18% Similarity=0.169 Sum_probs=48.7
Q ss_pred EecCCCcccccchhHHHHHHhCCceEEee------cCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEE
Q 018984 89 CHGYGDTCTFFFEGTARKLASSGYGVFAM------DYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFL 162 (348)
Q Consensus 89 ~HG~~~~~~~~~~~~~~~l~~~g~~vi~~------D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 162 (348)
+||.-+++.. ...+...|++|+++ +.+|||...+.. ...++..++..-++.... ...-..++
T Consensus 11 v~G~vGn~AA-----~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v----~~~e~l~~~l~~l~~~~~---~~~~davl 78 (281)
T COG2240 11 VYGSVGNSAA-----IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV----MPPEQLADLLNGLEAIDK---LGECDAVL 78 (281)
T ss_pred eecccccHhH-----HHHHHHcCCceeeeceEEecCCCCCCCCCCcC----CCHHHHHHHHHHHHhccc---ccccCEEE
Confidence 4566555432 23455568877655 688888865442 233333333333333211 12225677
Q ss_pred EEeChhH----HHHHHHHHhCCCCcceEEEeCccccccc
Q 018984 163 FGQSLGG----AVALKVHLKQPNAWSGAILVAPMCKIAD 197 (348)
Q Consensus 163 ~GhS~Gg----~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 197 (348)
-|+=-.+ .++-.+.+-..+.-+.+++++|...-..
T Consensus 79 tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 79 TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 7763222 2222222222224568899999876443
No 292
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=44.18 E-value=18 Score=27.62 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=23.8
Q ss_pred eeEEEEecCC---CcccccchhHHHHHHhCCceEEeec
Q 018984 84 GLVCYCHGYG---DTCTFFFEGTARKLASSGYGVFAMD 118 (348)
Q Consensus 84 ~~vv~~HG~~---~~~~~~~~~~~~~l~~~g~~vi~~D 118 (348)
..||++|... .+... ...+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~-l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKA-LPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHH-HHHHHHHHHHCCCEEEEHH
Confidence 3599999421 22233 5678888889999998874
No 293
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=43.63 E-value=68 Score=22.63 Aligned_cols=14 Identities=21% Similarity=0.555 Sum_probs=10.7
Q ss_pred HHHHHhCCceEEee
Q 018984 104 ARKLASSGYGVFAM 117 (348)
Q Consensus 104 ~~~l~~~g~~vi~~ 117 (348)
...|.+.|++|+++
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 45677889998765
No 294
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=43.58 E-value=2.5e+02 Score=25.40 Aligned_cols=60 Identities=8% Similarity=0.018 Sum_probs=36.3
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhC--CCCcceEEEeCcccc
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ--PNAWSGAILVAPMCK 194 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 194 (348)
.+++..+....+.+.+......+ .+|+..|--.-.--+..+..+. .+.++++|+.-+.+.
T Consensus 17 ~l~~~~~~~~~i~~~l~~~~~~~-~~v~~~~~v~~~~~i~~~~~~~~~~~~~dgvi~~m~TFs 78 (484)
T cd03557 17 ALKQVAAHSREIVDGLNASGKLP-VKIVFKPVLTTPDEILAVCREANADDNCAGVITWMHTFS 78 (484)
T ss_pred HHHHHHHHHHHHHHHhcccCCCC-eEEEEccccCCHHHHHHHHHHccccCCccEEEEccCCCc
Confidence 56666677777777766532222 2566666655555555555554 256999998876553
No 295
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=43.50 E-value=21 Score=29.81 Aligned_cols=19 Identities=32% Similarity=0.531 Sum_probs=16.7
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 018984 161 FLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~ 179 (348)
.+.|.|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6999999999999998644
No 296
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=43.30 E-value=40 Score=25.16 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=17.7
Q ss_pred CeEEEEeChhHHHHHHHHHhC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
.-.++|-|.|+.++..++...
T Consensus 29 ~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred eeEEEEECHHHHHHHHHHcCC
Confidence 347999999999999998653
No 297
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=42.70 E-value=49 Score=26.29 Aligned_cols=21 Identities=24% Similarity=0.080 Sum_probs=18.2
Q ss_pred eEEEEeChhHHHHHHHHHhCC
Q 018984 160 SFLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 160 v~l~GhS~Gg~~a~~~a~~~p 180 (348)
..++|-|.|+.++..++...+
T Consensus 31 ~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 31 TPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CEEEEEcHHHHHHHHHHcCCC
Confidence 479999999999999988654
No 298
>PRK14974 cell division protein FtsY; Provisional
Probab=42.29 E-value=1.6e+02 Score=25.02 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=38.3
Q ss_pred hCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCC--CCcceE
Q 018984 109 SSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP--NAWSGA 186 (348)
Q Consensus 109 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p--~~v~~~ 186 (348)
..|+.++.+|-.|.... -....+++..+.+.+... .++++.-+.-|.-+..-+..+. -.+.++
T Consensus 220 ~~~~DvVLIDTaGr~~~---------~~~lm~eL~~i~~~~~pd------~~iLVl~a~~g~d~~~~a~~f~~~~~~~gi 284 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHT---------DANLMDELKKIVRVTKPD------LVIFVGDALAGNDAVEQAREFNEAVGIDGV 284 (336)
T ss_pred hCCCCEEEEECCCccCC---------cHHHHHHHHHHHHhhCCc------eEEEeeccccchhHHHHHHHHHhcCCCCEE
Confidence 45788888888765432 223345555555443322 5667777666766666555443 246777
Q ss_pred EEe
Q 018984 187 ILV 189 (348)
Q Consensus 187 vl~ 189 (348)
|+-
T Consensus 285 IlT 287 (336)
T PRK14974 285 ILT 287 (336)
T ss_pred EEe
Confidence 764
No 299
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=41.81 E-value=84 Score=23.74 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=14.0
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEe
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQ 165 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~Gh 165 (348)
+.+.+.+.+..+++.++.. -+..||+++-+
T Consensus 72 ~~~~~~~~~~~fv~~iR~~--hP~tPIllv~~ 101 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREA--HPDTPILLVSP 101 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT---SSS-EEEEE-
T ss_pred CHHHHHHHHHHHHHHHHHh--CCCCCEEEEec
Confidence 3444555555566655544 23345555543
No 300
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=41.65 E-value=2.4e+02 Score=24.68 Aligned_cols=59 Identities=14% Similarity=0.214 Sum_probs=31.2
Q ss_pred hHHHHHHhCCceEEeecCCCC--ccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEe
Q 018984 102 GTARKLASSGYGVFAMDYPGF--GLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQ 165 (348)
Q Consensus 102 ~~~~~l~~~g~~vi~~D~~G~--G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~Gh 165 (348)
.-...|.+.|+.|+-+..--+ |+.. .+...+.++.+..+...+..- ....+.++.+.|-
T Consensus 133 ~Nl~~L~~~G~~vv~P~~g~~ac~~~g--~g~~~~~~~i~~~v~~~~~~~---~~~~~~~vlit~g 193 (390)
T TIGR00521 133 ENIKRLKDDGYIFIEPDSGLLACGDEG--KGRLAEPETIVKAAEREFSPK---EDLEGKRVLITAG 193 (390)
T ss_pred HHHHHHHHCCcEEECCCCccccccccc--CCCCCCHHHHHHHHHHHHhhc---cccCCceEEEecC
Confidence 345667777888776653222 3222 122246666666666555331 1234556777766
No 301
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=40.96 E-value=19 Score=26.52 Aligned_cols=56 Identities=20% Similarity=0.095 Sum_probs=26.8
Q ss_pred EeecCCCCccCCCC--CCCCCChhHHHHHHHHHHHHHHcCC--CCCCCCeEEEEeChhHH
Q 018984 115 FAMDYPGFGLSAGL--HGYIPSFDRLVDDVIEHYSNIKEYP--EFRTLPSFLFGQSLGGA 170 (348)
Q Consensus 115 i~~D~~G~G~s~~~--~~~~~~~~~~~~d~~~~l~~l~~~~--~~~~~~v~l~GhS~Gg~ 170 (348)
+.+-+-|||..... .-..++..+++.-+..+-+.+.... .....+|.|+|.|++..
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 44445577766211 1111355666666644445554332 12334899999999987
No 302
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=40.66 E-value=25 Score=28.61 Aligned_cols=34 Identities=15% Similarity=0.231 Sum_probs=26.3
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeec
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMD 118 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D 118 (348)
..||++|....+... ...++..|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~a-L~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEG-LEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHH-HHHHHHHHHHCCCEEEeHH
Confidence 458999976555444 6788899999999998875
No 303
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=40.63 E-value=1.6e+02 Score=25.92 Aligned_cols=66 Identities=24% Similarity=0.260 Sum_probs=43.3
Q ss_pred hCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCC--cceE
Q 018984 109 SSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNA--WSGA 186 (348)
Q Consensus 109 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~--v~~~ 186 (348)
..+|.|+.+|-.|.-. --+++.+++.++-+.+... .+.+|--+|=|.-|...|..+.+. +.++
T Consensus 180 ~~~~DvvIvDTAGRl~---------ide~Lm~El~~Ik~~~~P~------E~llVvDam~GQdA~~~A~aF~e~l~itGv 244 (451)
T COG0541 180 EEGYDVVIVDTAGRLH---------IDEELMDELKEIKEVINPD------ETLLVVDAMIGQDAVNTAKAFNEALGITGV 244 (451)
T ss_pred HcCCCEEEEeCCCccc---------ccHHHHHHHHHHHhhcCCC------eEEEEEecccchHHHHHHHHHhhhcCCceE
Confidence 4456666666554311 1233455555555544333 799999999999999999887664 6788
Q ss_pred EEe
Q 018984 187 ILV 189 (348)
Q Consensus 187 vl~ 189 (348)
|+-
T Consensus 245 IlT 247 (451)
T COG0541 245 ILT 247 (451)
T ss_pred EEE
Confidence 775
No 304
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=40.55 E-value=29 Score=28.14 Aligned_cols=38 Identities=11% Similarity=0.111 Sum_probs=29.1
Q ss_pred ceeEEEEecCCCccc-ccchhHHHHHHhCCceEEeecCC
Q 018984 83 KGLVCYCHGYGDTCT-FFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
.|+||++.|+.+++. .....+...|..+|++|.++.-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 589999999976543 22566777887889999999655
No 305
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=40.49 E-value=1.8e+02 Score=22.90 Aligned_cols=29 Identities=14% Similarity=0.009 Sum_probs=17.6
Q ss_pred HHHHHHHHHcCC----CCCCCCeEEEEeChhHHH
Q 018984 142 VIEHYSNIKEYP----EFRTLPSFLFGQSLGGAV 171 (348)
Q Consensus 142 ~~~~l~~l~~~~----~~~~~~v~l~GhS~Gg~~ 171 (348)
++.+|+|+.... .+.++++.++|.| ||..
T Consensus 109 LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~ 141 (219)
T TIGR02690 109 QKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQ 141 (219)
T ss_pred HHHHHHhcccCcccccccCCCcEEEEEeC-CcHh
Confidence 556777775531 2455678888888 4433
No 306
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=40.07 E-value=48 Score=23.80 Aligned_cols=41 Identities=20% Similarity=0.219 Sum_probs=25.7
Q ss_pred EEEEecCCCcc-cccchhHHHHHHhCCceEEeecCCCCccCC
Q 018984 86 VCYCHGYGDTC-TFFFEGTARKLASSGYGVFAMDYPGFGLSA 126 (348)
Q Consensus 86 vv~~HG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~ 126 (348)
+|.+-|...++ ..+-..++..|.++|++|.++=.-+||+..
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 45555654443 344677888898899999977666776554
No 307
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=39.59 E-value=66 Score=25.47 Aligned_cols=57 Identities=14% Similarity=0.202 Sum_probs=38.5
Q ss_pred ceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeE--EEEeChhHHHHHH
Q 018984 112 YGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSF--LFGQSLGGAVALK 174 (348)
Q Consensus 112 ~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~--l~GhS~Gg~~a~~ 174 (348)
=-|+.+|-+|...+....- ..+......+...+...+.. +.+++ ++|++++|.+...
T Consensus 66 pIv~lVD~~sQa~grreEl--lGi~~alAhla~a~a~AR~~----GHpvI~Lv~G~A~SGaFLA~ 124 (234)
T PF06833_consen 66 PIVALVDVPSQAYGRREEL--LGINQALAHLAKAYALARLA----GHPVIGLVYGKAMSGAFLAH 124 (234)
T ss_pred CEEEEEeCCccccchHHHH--hhHHHHHHHHHHHHHHHHHc----CCCeEEEEecccccHHHHHH
Confidence 4578899998876654322 36667777777777777665 23665 8999987765443
No 308
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=39.58 E-value=45 Score=18.45 Aligned_cols=34 Identities=21% Similarity=0.396 Sum_probs=24.2
Q ss_pred hCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHH
Q 018984 109 SSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSN 148 (348)
Q Consensus 109 ~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 148 (348)
..+|.+.++|++|.-.. + .++++..+.+.+++..
T Consensus 11 ~~~y~~~~pdlpg~~t~-G-----~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFTQ-G-----DTLEEALENAKEALEL 44 (48)
T ss_dssp SSSEEEEETTCCTCEEE-E-----SSHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhhc-C-----CCHHHHHHHHHHHHHH
Confidence 45789999999986421 1 2788877777777764
No 309
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=39.44 E-value=16 Score=27.42 Aligned_cols=36 Identities=11% Similarity=-0.030 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 137 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 137 ~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
++.+++.+++++.+.. -.-.+|-|||++.|+.++.-
T Consensus 82 ~Yw~El~~i~dwa~~~------v~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 82 DYWEELTEILDWAKTH------VTSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred chHHHHHHHHHHHHHh------CcchHHHHHHHHHHHHHHcC
Confidence 4566789999999865 45688999999999988754
No 310
>PRK13690 hypothetical protein; Provisional
Probab=39.08 E-value=70 Score=23.92 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=25.7
Q ss_pred ChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCh
Q 018984 134 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSL 167 (348)
Q Consensus 134 ~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~ 167 (348)
+++++.+++..+++.+..........+.++|.|.
T Consensus 2 ~~~~i~~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 2 DLEEIKKQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 3556677777777777776666677899999994
No 311
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=38.87 E-value=68 Score=28.50 Aligned_cols=70 Identities=19% Similarity=0.251 Sum_probs=42.6
Q ss_pred HHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh------
Q 018984 105 RKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK------ 178 (348)
Q Consensus 105 ~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~------ 178 (348)
++-..+||.|+.+|-.|.-... ..+...+..+++.-... .|+.+|--+=|.=++.-+..
T Consensus 460 ~~a~~~gfDVvLiDTAGR~~~~---------~~lm~~l~k~~~~~~pd------~i~~vgealvg~dsv~q~~~fn~al~ 524 (587)
T KOG0781|consen 460 QEARNQGFDVVLIDTAGRMHNN---------APLMTSLAKLIKVNKPD------LILFVGEALVGNDSVDQLKKFNRALA 524 (587)
T ss_pred HHHHhcCCCEEEEeccccccCC---------hhHHHHHHHHHhcCCCc------eEEEehhhhhCcHHHHHHHHHHHHHh
Confidence 3344579999999987753322 22344555555543322 78899987777666644432
Q ss_pred ---CCCCcceEEEe
Q 018984 179 ---QPNAWSGAILV 189 (348)
Q Consensus 179 ---~p~~v~~~vl~ 189 (348)
.|..++++++.
T Consensus 525 ~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 525 DHSTPRLIDGILLT 538 (587)
T ss_pred cCCCccccceEEEE
Confidence 24568887764
No 312
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=37.88 E-value=34 Score=27.08 Aligned_cols=38 Identities=18% Similarity=0.178 Sum_probs=29.0
Q ss_pred ceeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecCC
Q 018984 83 KGLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
.|+||++.|+.+++.. ....+...|..+|+.|.++.-|
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 5899999999765432 2566777787889999998766
No 313
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=37.86 E-value=28 Score=30.58 Aligned_cols=24 Identities=25% Similarity=0.347 Sum_probs=19.7
Q ss_pred CeEEEEeChhHHHHHHHHHhCCCC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQPNA 182 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p~~ 182 (348)
+-++.|-|.|+.+|..++...++.
T Consensus 102 p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 102 PRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHH
Confidence 347999999999999998865544
No 314
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=37.72 E-value=1.8e+02 Score=23.01 Aligned_cols=82 Identities=20% Similarity=0.267 Sum_probs=46.5
Q ss_pred HHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHH----HHHHHHh
Q 018984 103 TARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAV----ALKVHLK 178 (348)
Q Consensus 103 ~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~----a~~~a~~ 178 (348)
.++.|...+..|+..|+-|-...-.. .+.+...++|....++.+... +..-.+-+.+|-+.|+.- |+.+...
T Consensus 102 ~~eklk~~~vdvvsLDfvgDn~vIk~---vy~l~ksv~dyl~~l~~L~e~-~irvvpHitiGL~~gki~~e~kaIdiL~~ 177 (275)
T COG1856 102 DLEKLKEELVDVVSLDFVGDNDVIKR---VYKLPKSVEDYLRSLLLLKEN-GIRVVPHITIGLDFGKIHGEFKAIDILVN 177 (275)
T ss_pred HHHHHHHhcCcEEEEeecCChHHHHH---HHcCCccHHHHHHHHHHHHHc-CceeceeEEEEeccCcccchHHHHHHHhc
Confidence 44566667788999999764322110 012222245555555555543 122225579999999864 6667776
Q ss_pred CCCCcceEEEeC
Q 018984 179 QPNAWSGAILVA 190 (348)
Q Consensus 179 ~p~~v~~~vl~~ 190 (348)
++ .+.+|+..
T Consensus 178 ~~--~DalVl~v 187 (275)
T COG1856 178 YE--PDALVLVV 187 (275)
T ss_pred CC--CCeEEEEE
Confidence 65 45555543
No 315
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=37.36 E-value=2.4e+02 Score=23.49 Aligned_cols=122 Identities=21% Similarity=0.223 Sum_probs=61.6
Q ss_pred EEecCCCceeEEEEeccC--CCCCceeEEEEecCCCcccccchhHHHHHHhC--CceEEeecCCCC--------------
Q 018984 61 YEVNSRGVEIFCKSWLPE--TSQPKGLVCYCHGYGDTCTFFFEGTARKLASS--GYGVFAMDYPGF-------------- 122 (348)
Q Consensus 61 ~~~~~~g~~l~~~~~~p~--~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~vi~~D~~G~-------------- 122 (348)
.|.+..+...||....|+ ......+=.|+-|.|.... ..-+.++|.++ +.+++++|-.|.
T Consensus 144 Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGT--itGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~G 221 (300)
T COG0031 144 QFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGT--ITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEG 221 (300)
T ss_pred hcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchh--HHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCC
Confidence 344555666666554442 1111113344445543332 45677777654 478899887652
Q ss_pred -ccCCCCCCCCCC-hhH----HHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHH--HHHHhCCCCcceEEEeCc
Q 018984 123 -GLSAGLHGYIPS-FDR----LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVAL--KVHLKQPNAWSGAILVAP 191 (348)
Q Consensus 123 -G~s~~~~~~~~~-~~~----~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~--~~a~~~p~~v~~~vl~~~ 191 (348)
|.+.-+.....+ +++ --++..+..+.+..+ .=.++|-|-|+.++. .+|.+.+. =+.+|.+-|
T Consensus 222 IG~~~ip~~~~~~~iD~v~~V~d~~A~~~~r~La~~------eGilvG~SsGA~~~aa~~~a~~~~~-g~~IVti~p 291 (300)
T COG0031 222 IGAGFVPENLDLDLIDEVIRVSDEEAIATARRLARE------EGLLVGISSGAALAAALKLAKELPA-GKTIVTILP 291 (300)
T ss_pred CCCCcCCcccccccCceEEEECHHHHHHHHHHHHHH------hCeeecccHHHHHHHHHHHHHhcCC-CCeEEEEEC
Confidence 222111111000 111 123445555555544 447999999998754 45666653 344555444
No 316
>PRK00865 glutamate racemase; Provisional
Probab=37.18 E-value=1.1e+02 Score=24.94 Aligned_cols=49 Identities=14% Similarity=0.157 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHhh
Q 018984 290 DPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 340 (348)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~~ 340 (348)
-....+.+.+.+ |+.+++.+-+..|++.-+++.+........+.+||.+
T Consensus 17 GLtvl~~i~~~l--p~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~L~~ 65 (261)
T PRK00865 17 GLTVLREIRRLL--PDEHIIYVGDTARFPYGEKSEEEIRERTLEIVEFLLE 65 (261)
T ss_pred HHHHHHHHHHHC--CCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 345667777787 8889999999999999999988888888888888875
No 317
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=37.08 E-value=57 Score=27.11 Aligned_cols=35 Identities=14% Similarity=-0.064 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 138 LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 138 ~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
+.+++.++++++... .+-++|-|+|+.+++.+..-
T Consensus 120 YW~El~~i~~w~~~~------~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 120 YWDELKEILDWAKTH------VTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred hHHHHHHHHHHHHHc------CCCEEEEcHHHHHHHHHcCC
Confidence 355688888888865 56799999999999877643
No 318
>COG5023 Tubulin [Cytoskeleton]
Probab=36.47 E-value=1.2e+02 Score=26.05 Aligned_cols=58 Identities=24% Similarity=0.316 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHH--------HHHHhCCCCcceEEEeCcccc
Q 018984 135 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVAL--------KVHLKQPNAWSGAILVAPMCK 194 (348)
Q Consensus 135 ~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~--------~~a~~~p~~v~~~vl~~~~~~ 194 (348)
-.+..+|+.+.|+..... .++.+=.++=||.||..+. ++..++|+++..-..+-|...
T Consensus 109 G~e~~ddvmd~IrreAd~--cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~ 174 (443)
T COG5023 109 GKEIIDDVMDMIRREADG--CDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPK 174 (443)
T ss_pred hHHHHHHHHHHHHHHhhc--CccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEeccCCc
Confidence 355678888888877655 3344557888887765533 345678887777666666533
No 319
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=36.35 E-value=1.3e+02 Score=20.62 Aligned_cols=55 Identities=20% Similarity=0.173 Sum_probs=33.4
Q ss_pred EEEecCCCcccccchhHHHHHHh-CCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcC
Q 018984 87 CYCHGYGDTCTFFFEGTARKLAS-SGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEY 152 (348)
Q Consensus 87 v~~HG~~~~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~ 152 (348)
|++||-.|++.. .+++.+++ .|+.++.+|..-...+ ...+..+.+..+++.....
T Consensus 1 ill~G~~G~GKT---~l~~~la~~l~~~~~~i~~~~~~~~--------~~~~~~~~i~~~~~~~~~~ 56 (132)
T PF00004_consen 1 ILLHGPPGTGKT---TLARALAQYLGFPFIEIDGSELISS--------YAGDSEQKIRDFFKKAKKS 56 (132)
T ss_dssp EEEESSTTSSHH---HHHHHHHHHTTSEEEEEETTHHHTS--------STTHHHHHHHHHHHHHHHT
T ss_pred CEEECcCCCCee---HHHHHHHhhcccccccccccccccc--------ccccccccccccccccccc
Confidence 688999888765 34444444 2788888887644311 3344455666666665543
No 320
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=36.10 E-value=1.7e+02 Score=25.91 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=41.2
Q ss_pred HHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC--Ccc
Q 018984 107 LASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN--AWS 184 (348)
Q Consensus 107 l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~--~v~ 184 (348)
+...+|.++.+|-+|.-. .-+.+.+++..+.+.... ..++++--++-|.-+...+..+.+ .+.
T Consensus 178 ~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~~p------~e~lLVlda~~Gq~a~~~a~~F~~~~~~~ 242 (429)
T TIGR01425 178 FKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAIQP------DNIIFVMDGSIGQAAEAQAKAFKDSVDVG 242 (429)
T ss_pred HHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhcCC------cEEEEEeccccChhHHHHHHHHHhccCCc
Confidence 334589999999988532 223344555555443322 257788777777777766666533 367
Q ss_pred eEEEe
Q 018984 185 GAILV 189 (348)
Q Consensus 185 ~~vl~ 189 (348)
++|+-
T Consensus 243 g~IlT 247 (429)
T TIGR01425 243 SVIIT 247 (429)
T ss_pred EEEEE
Confidence 77764
No 321
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=34.62 E-value=41 Score=27.30 Aligned_cols=21 Identities=24% Similarity=0.191 Sum_probs=18.4
Q ss_pred EEEEeChhHHHHHHHHHhCCC
Q 018984 161 FLFGQSLGGAVALKVHLKQPN 181 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~p~ 181 (348)
.++|.|.|+.++..++...+.
T Consensus 30 ~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred EEEEECHHHHhHHHHHhCCcc
Confidence 799999999999999887654
No 322
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=34.53 E-value=55 Score=29.15 Aligned_cols=18 Identities=33% Similarity=0.637 Sum_probs=15.3
Q ss_pred EEEEeChhHHHHHHHHHh
Q 018984 161 FLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~ 178 (348)
.++|.|.||++|..+...
T Consensus 453 ~ICGvSTG~ilA~~Lg~k 470 (763)
T KOG4231|consen 453 LICGVSTGGILAIALGVK 470 (763)
T ss_pred HHhccCchHHHHHHHHhc
Confidence 389999999999988654
No 323
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=34.39 E-value=47 Score=28.92 Aligned_cols=63 Identities=11% Similarity=0.220 Sum_probs=33.0
Q ss_pred CCCcEEEEecCCCCcCCHHHHHHHHHHhcCCCce--EEEcCCCCcccc---cCCChhHHHHHHHHHHHHHhhh
Q 018984 274 VSLPLLILHGENDTVTDPSVSKALYEKASSKDKK--CILYKDAFHSLL---EGEPDDMIIRVFADIISWLDDH 341 (348)
Q Consensus 274 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~~gH~~~---~~~~~~~~~~~~~~i~~fl~~~ 341 (348)
-..|++++.|.-|.+-+. ....+.+.+...+.- .+.+||.|+... .++.+ .+.+.+++||...
T Consensus 188 ~p~P~VIv~gGlDs~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~----~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSS----RLHQAVLDYLASR 255 (411)
T ss_dssp S-EEEEEEE--TTS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CC----HHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCcchhHHH-HHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHH----HHHHHHHHHHhcC
Confidence 357999999999987542 222222323223443 445688888643 23333 3888999998764
No 324
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=34.17 E-value=1.4e+02 Score=24.76 Aligned_cols=73 Identities=14% Similarity=0.034 Sum_probs=41.5
Q ss_pred EEEecCCCcccccchhHHHHHHhC-CceEEeecCCCCcc-----CCCC-----------------CCCCCChhHHHHHHH
Q 018984 87 CYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDYPGFGL-----SAGL-----------------HGYIPSFDRLVDDVI 143 (348)
Q Consensus 87 v~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~-----s~~~-----------------~~~~~~~~~~~~d~~ 143 (348)
|++-|-.+++.. .++..|++. +..++..|-.-.-. |.++ ....++..++..+..
T Consensus 2 i~i~G~t~~GKs---~la~~l~~~~~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~f~~~a~ 78 (287)
T TIGR00174 2 IFIMGPTAVGKS---QLAIQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAADFQTLAL 78 (287)
T ss_pred EEEECCCCCCHH---HHHHHHHHhCCCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHHHHHHHH
Confidence 455565555433 455666554 66788887532211 1111 112246678888888
Q ss_pred HHHHHHHcCCCCCCCCeEEEEeC
Q 018984 144 EHYSNIKEYPEFRTLPSFLFGQS 166 (348)
Q Consensus 144 ~~l~~l~~~~~~~~~~v~l~GhS 166 (348)
+.++.+... +...+++|-|
T Consensus 79 ~~i~~~~~~----g~~pi~vGGT 97 (287)
T TIGR00174 79 NAIADITAR----GKIPLLVGGT 97 (287)
T ss_pred HHHHHHHhC----CCCEEEEcCc
Confidence 888887665 2246777765
No 325
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=34.11 E-value=33 Score=29.99 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=21.2
Q ss_pred CeEEEEeChhHHHHHHHHHhCCCCcce
Q 018984 159 PSFLFGQSLGGAVALKVHLKQPNAWSG 185 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p~~v~~ 185 (348)
+-+++|-|.|+.+|..++...++.+..
T Consensus 96 p~iI~GtSAGAivaalla~~t~~el~~ 122 (407)
T cd07232 96 PNVISGTSGGSLVAALLCTRTDEELKQ 122 (407)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 447999999999999999865554433
No 326
>PF14403 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 2
Probab=34.09 E-value=53 Score=29.00 Aligned_cols=88 Identities=14% Similarity=0.144 Sum_probs=50.8
Q ss_pred EEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCC-------CCCCC------ChhHHH
Q 018984 73 KSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGL-------HGYIP------SFDRLV 139 (348)
Q Consensus 73 ~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~-------~~~~~------~~~~~~ 139 (348)
..+.....+|+-+||=..+.+...+ +..+.+.|.+.|+.++..|.+---.-++. -...+ .+-+..
T Consensus 177 ~~~~~~~~~P~IAIvDf~~~~~~~E--f~~f~~~f~~~G~~~vI~d~~~L~y~~g~L~~~~~~ID~VyRR~Vt~e~l~~~ 254 (445)
T PF14403_consen 177 RTFGGRVEKPNIAIVDFLEYPTLSE--FEVFQRLFEEHGYDCVICDPRDLEYRDGRLYAGGRPIDAVYRRFVTSELLERY 254 (445)
T ss_pred HHhcCcCCCCcEEEEecccCCccch--HHHHHHHHHHcCCceEecChHHceecCCEEEECCEeeehhhHhhhhHHhhhcc
Confidence 3343333344556777777666554 67899999999999999987654322111 00000 112223
Q ss_pred HHHHHHHHHHHcCCCCCCCCeEEEEeChh
Q 018984 140 DDVIEHYSNIKEYPEFRTLPSFLFGQSLG 168 (348)
Q Consensus 140 ~d~~~~l~~l~~~~~~~~~~v~l~GhS~G 168 (348)
+.+..+++..... .+.++|..-+
T Consensus 255 d~~~~li~Ay~~~------av~~vgsfrs 277 (445)
T PF14403_consen 255 DEVQPLIQAYRDG------AVCMVGSFRS 277 (445)
T ss_pred ccchHHHHHHhcC------CeEEecchhh
Confidence 3556667766655 6777775543
No 327
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=33.89 E-value=1.3e+02 Score=24.29 Aligned_cols=46 Identities=15% Similarity=0.264 Sum_probs=36.5
Q ss_pred HHHHHHHHHhcCCCceEEEcCCCCcccccCCChhHHHHHHHHHHHHHh
Q 018984 292 SVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 339 (348)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~i~~fl~ 339 (348)
...+.+.+.+ |+.+++.+-+..|++.-+++.+........+.+||.
T Consensus 12 tv~~~l~~~~--p~~~~iy~~D~~~~PYG~ks~~~i~~~~~~~~~~L~ 57 (251)
T TIGR00067 12 SVLKEIRKQL--PKEHYIYVGDTKRFPYGEKSPEFILEYVLELLTFLK 57 (251)
T ss_pred HHHHHHHHHC--CCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4556667777 788889898889999998888877777777778877
No 328
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=33.57 E-value=3.3e+02 Score=23.90 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=31.6
Q ss_pred hHHHHHHhCCceEEeecCCCC---ccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEe
Q 018984 102 GTARKLASSGYGVFAMDYPGF---GLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQ 165 (348)
Q Consensus 102 ~~~~~l~~~g~~vi~~D~~G~---G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~Gh 165 (348)
.-...|.+.|+.|+-+. +|. |+.. .+...+.++.+..+...+.. ....+.++.+.|-
T Consensus 137 ~Nl~~L~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~~----~~l~gk~vlITgG 196 (399)
T PRK05579 137 RNLATLRSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALSP----KDLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhhh----cccCCCEEEEeCC
Confidence 34567777899888665 333 2222 12234666666666555532 1244556777776
No 329
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=33.28 E-value=1.7e+02 Score=25.41 Aligned_cols=75 Identities=20% Similarity=0.224 Sum_probs=45.4
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEE
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLF 163 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~ 163 (348)
-.|++.--++.+.. .-..+++.|.+.|..|..+++.-. |..++++.+... +-+++
T Consensus 249 V~l~Y~smyg~T~~-ma~aiaegl~~~gv~v~~~~~~~~------------------~~~eI~~~i~~a------~~~vv 303 (388)
T COG0426 249 VDLIYDSMYGNTEK-MAQAIAEGLMKEGVDVEVINLEDA------------------DPSEIVEEILDA------KGLVV 303 (388)
T ss_pred EEEEEecccCCHHH-HHHHHHHHhhhcCCceEEEEcccC------------------CHHHHHHHHhhc------ceEEE
Confidence 34455444554433 367788888889999999987411 222233333222 67888
Q ss_pred EeC---------hhHHHHHHHHHhCCCCc
Q 018984 164 GQS---------LGGAVALKVHLKQPNAW 183 (348)
Q Consensus 164 GhS---------~Gg~~a~~~a~~~p~~v 183 (348)
|-+ ++..+....+...+.+.
T Consensus 304 GsPT~~~~~~p~i~~~l~~v~~~~~~~k~ 332 (388)
T COG0426 304 GSPTINGGAHPPIQTALGYVLALAPKNKL 332 (388)
T ss_pred ecCcccCCCCchHHHHHHHHHhccCcCce
Confidence 888 56666666666666654
No 330
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=33.18 E-value=47 Score=28.75 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=20.0
Q ss_pred CeEEEEeChhHHHHHHHHHhCCCCc
Q 018984 159 PSFLFGQSLGGAVALKVHLKQPNAW 183 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p~~v 183 (348)
+-++.|-|.|+.+|..+|...++.+
T Consensus 112 p~~i~GtS~Gaivaa~~a~~~~~e~ 136 (391)
T cd07229 112 PRIITGTATGALIAALVGVHTDEEL 136 (391)
T ss_pred CceEEEecHHHHHHHHHHcCCHHHH
Confidence 4579999999999999998654433
No 331
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=32.23 E-value=54 Score=29.89 Aligned_cols=21 Identities=29% Similarity=0.234 Sum_probs=17.7
Q ss_pred CeEEEEeChhHHHHHHHHHhC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
+-.++|||+|=+.|+..|.-.
T Consensus 266 Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 266 PDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCEEeecCHHHHHHHHHhCCC
Confidence 679999999999988877544
No 332
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=32.01 E-value=2.8e+02 Score=23.24 Aligned_cols=76 Identities=17% Similarity=0.126 Sum_probs=46.2
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhC-CceEEeecC----CCCcc-CCCC-----------------CCCCCChhHHHH
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDY----PGFGL-SAGL-----------------HGYIPSFDRLVD 140 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~----~G~G~-s~~~-----------------~~~~~~~~~~~~ 140 (348)
+.++++-|-.+++.. .++-.|+++ |-.||..|- +|..- |.++ +...++..++.+
T Consensus 3 ~~~i~I~GPTAsGKT---~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 3 PKLIVIAGPTASGKT---ALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred ccEEEEECCCCcCHH---HHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 446666676655543 355556554 778999883 33211 1111 222457888899
Q ss_pred HHHHHHHHHHcCCCCCCCCeEEEEeC
Q 018984 141 DVIEHYSNIKEYPEFRTLPSFLFGQS 166 (348)
Q Consensus 141 d~~~~l~~l~~~~~~~~~~v~l~GhS 166 (348)
++...++.+..+. +-.+|+|-|
T Consensus 80 ~a~~~i~~i~~rg----k~pIlVGGT 101 (308)
T COG0324 80 DALAAIDDILARG----KLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHhCC----CCcEEEccH
Confidence 9999999988752 245777755
No 333
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=31.90 E-value=3.2e+02 Score=23.24 Aligned_cols=58 Identities=19% Similarity=0.146 Sum_probs=34.0
Q ss_pred EecCCCceeEEEEeccC--CCCCceeEEEEecCCCcccccchhHHHHHHhC--CceEEeecCCC
Q 018984 62 EVNSRGVEIFCKSWLPE--TSQPKGLVCYCHGYGDTCTFFFEGTARKLASS--GYGVFAMDYPG 121 (348)
Q Consensus 62 ~~~~~g~~l~~~~~~p~--~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~--g~~vi~~D~~G 121 (348)
|-...+-..+|....|+ ....+++=+|+||.|.... ...+.+++.++ +..|+.+|--+
T Consensus 188 f~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGT--itgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 188 FHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGT--ITGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred hcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCce--eechhHHHHHhCCCCEEEEeCCCc
Confidence 33444555666655443 1112445688888875544 34566777654 57788888554
No 334
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=31.88 E-value=2.5e+02 Score=21.86 Aligned_cols=33 Identities=24% Similarity=0.149 Sum_probs=23.3
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCCC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPG 121 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 121 (348)
+..+-|.+... =+.++..|+++|++|++.|+.-
T Consensus 16 ~~~vtGg~sGI---GrAia~~la~~Garv~v~dl~~ 48 (256)
T KOG1200|consen 16 VAAVTGGSSGI---GRAIAQLLAKKGARVAVADLDS 48 (256)
T ss_pred eeEEecCCchH---HHHHHHHHHhcCcEEEEeecch
Confidence 44555544332 3578899999999999998764
No 335
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=31.83 E-value=88 Score=25.11 Aligned_cols=20 Identities=25% Similarity=0.220 Sum_probs=17.3
Q ss_pred EEEEeChhHHHHHHHHHhCC
Q 018984 161 FLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~p 180 (348)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987654
No 336
>COG3933 Transcriptional antiterminator [Transcription]
Probab=31.73 E-value=2.8e+02 Score=24.63 Aligned_cols=74 Identities=16% Similarity=0.228 Sum_probs=50.5
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEE
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFL 162 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l 162 (348)
-.+||..||....++ ...++..|...+ -+.++|+|- ..++.+..+.+.+.++..... +=++
T Consensus 109 v~vIiiAHG~sTASS--maevanrLL~~~-~~~aiDMPL----------dvsp~~vle~l~e~~k~~~~~------~Gll 169 (470)
T COG3933 109 VKVIIIAHGYSTASS--MAEVANRLLGEE-IFIAIDMPL----------DVSPSDVLEKLKEYLKERDYR------SGLL 169 (470)
T ss_pred eeEEEEecCcchHHH--HHHHHHHHhhcc-ceeeecCCC----------cCCHHHHHHHHHHHHHhcCcc------CceE
Confidence 568999999976554 467888887763 588999872 136677777777776665443 3245
Q ss_pred EEeChhHHHHHHH
Q 018984 163 FGQSLGGAVALKV 175 (348)
Q Consensus 163 ~GhS~Gg~~a~~~ 175 (348)
+=-.||......=
T Consensus 170 lLVDMGSL~~f~~ 182 (470)
T COG3933 170 LLVDMGSLTSFGS 182 (470)
T ss_pred EEEecchHHHHHH
Confidence 5568888776543
No 337
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=31.51 E-value=1.6e+02 Score=20.03 Aligned_cols=58 Identities=12% Similarity=0.049 Sum_probs=34.9
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccc--c---chhHHHHHHhCCceEEeecC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF--F---FEGTARKLASSGYGVFAMDY 119 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~--~---~~~~~~~l~~~g~~vi~~D~ 119 (348)
.+.....+.+|..+....+ .++++||++-....+... . +..+...+.+.|..++++..
T Consensus 5 ~P~f~l~~~~g~~~~l~~l-----~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~ 67 (124)
T PF00578_consen 5 APDFTLTDSDGKTVSLSDL-----KGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST 67 (124)
T ss_dssp GGCEEEETTTSEEEEGGGG-----TTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCCcEeECCCCCEEEHHHH-----CCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc
Confidence 4566677888888777655 225667766555222211 1 23344555566899998874
No 338
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.35 E-value=87 Score=26.04 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCeEEEEeC--hhHHHHHHHHHh
Q 018984 139 VDDVIEHYSNIKEYPEFRTLPSFLFGQS--LGGAVALKVHLK 178 (348)
Q Consensus 139 ~~d~~~~l~~l~~~~~~~~~~v~l~GhS--~Gg~~a~~~a~~ 178 (348)
...+.+++++.... +.+.++.++|.| ||--++..+..+
T Consensus 143 p~aii~lL~~~~i~--l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGD--LTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCC--CCCCEEEEECCCCccHHHHHHHHHHC
Confidence 55677778877654 567789999997 999999888754
No 339
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=31.23 E-value=1e+02 Score=23.02 Aligned_cols=20 Identities=25% Similarity=0.187 Sum_probs=16.6
Q ss_pred CeEEEEeChhHHHHHHHHHh
Q 018984 159 PSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~ 178 (348)
.-.+.|-|.||.+|+.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 45799999999999888765
No 340
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=30.68 E-value=3.1e+02 Score=22.68 Aligned_cols=58 Identities=14% Similarity=0.333 Sum_probs=30.3
Q ss_pred hhHHHHHHhCCce--EEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHH
Q 018984 101 EGTARKLASSGYG--VFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVA 172 (348)
Q Consensus 101 ~~~~~~l~~~g~~--vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a 172 (348)
....+.+.+.|.. =+.+|. |.|.+. +.++ .-.+..-++.+... + .-+++|+|-=.++.
T Consensus 166 ~~~i~~a~~~GI~~~~IilDP-GiGF~k-------~~~~-n~~ll~~l~~l~~l-g----~Pilvg~SRKsfig 225 (282)
T PRK11613 166 IEQIARCEAAGIAKEKLLLDP-GFGFGK-------NLSH-NYQLLARLAEFHHF-N----LPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHcCCChhhEEEeC-CCCcCC-------CHHH-HHHHHHHHHHHHhC-C----CCEEEEecccHHHH
Confidence 3344555567875 677884 676542 2322 22233334444321 1 35799999554443
No 341
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=30.65 E-value=1.1e+02 Score=21.33 Aligned_cols=14 Identities=21% Similarity=0.482 Sum_probs=10.9
Q ss_pred HHHHHhCCceEEee
Q 018984 104 ARKLASSGYGVFAM 117 (348)
Q Consensus 104 ~~~l~~~g~~vi~~ 117 (348)
...|.+.|+.|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 45677889999876
No 342
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=30.60 E-value=26 Score=27.72 Aligned_cols=38 Identities=16% Similarity=0.215 Sum_probs=25.4
Q ss_pred ceeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecCC
Q 018984 83 KGLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
.|+||++.|+.+++.. ....+...|..+|++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 5799999999877542 1344555556689999999876
No 343
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=30.56 E-value=2.2e+02 Score=23.28 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=35.3
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEY 152 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~ 152 (348)
.+++ |.+|++......++..+ .++.++-++.. . .+++.++-+|+..++...+.+
T Consensus 34 ~LLv-G~~GsGr~sl~rLaa~i--~~~~~~~i~~~--------~--~y~~~~f~~dLk~~~~~ag~~ 87 (268)
T PF12780_consen 34 ALLV-GVGGSGRQSLARLAAFI--CGYEVFQIEIT--------K--GYSIKDFKEDLKKALQKAGIK 87 (268)
T ss_dssp EEEE-CTTTSCHHHHHHHHHHH--TTEEEE-TTTS--------T--TTHHHHHHHHHHHHHHHHHCS
T ss_pred eEEe-cCCCccHHHHHHHHHHH--hccceEEEEee--------C--CcCHHHHHHHHHHHHHHHhcc
Confidence 4443 56656544345566655 36888887742 1 158889999999999888765
No 344
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=29.98 E-value=1.4e+02 Score=23.97 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=23.1
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCCC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPG 121 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 121 (348)
++++-|..+.- -..+++.|+++|+.|+..+...
T Consensus 11 ~vlItG~s~gI---G~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 11 IIIVTGGSSGI---GLAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEEeCCCChH---HHHHHHHHHHCCCEEEEEeCCc
Confidence 45566654432 2467888999999999988654
No 345
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=29.85 E-value=26 Score=28.48 Aligned_cols=16 Identities=25% Similarity=0.316 Sum_probs=12.4
Q ss_pred CCeEEEEeChhHHHHH
Q 018984 158 LPSFLFGQSLGGAVAL 173 (348)
Q Consensus 158 ~~v~l~GhS~Gg~~a~ 173 (348)
..|+++|||+|..=..
T Consensus 235 ~~I~i~GhSl~~~D~~ 250 (270)
T PF14253_consen 235 DEIIIYGHSLGEVDYP 250 (270)
T ss_pred CEEEEEeCCCchhhHH
Confidence 3799999999975433
No 346
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=29.63 E-value=1.6e+02 Score=19.97 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=40.6
Q ss_pred ceeEEEEecCCCcccccchhHHHH-HHhC--CceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCC
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARK-LASS--GYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLP 159 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~-l~~~--g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~ 159 (348)
.|+|||.--+.. |...++. |... .+.|+-+|...+| .++...+..+..+..++ .
T Consensus 14 ~~VVifSKs~C~-----~c~~~k~ll~~~~v~~~vvELD~~~~g----------------~eiq~~l~~~tg~~tvP--~ 70 (104)
T KOG1752|consen 14 NPVVIFSKSSCP-----YCHRAKELLSDLGVNPKVVELDEDEDG----------------SEIQKALKKLTGQRTVP--N 70 (104)
T ss_pred CCEEEEECCcCc-----hHHHHHHHHHhCCCCCEEEEccCCCCc----------------HHHHHHHHHhcCCCCCC--E
Confidence 567777662221 2222333 3332 3567777755332 14555555555443333 5
Q ss_pred eEEEEeChhHHHHHHHHHhC
Q 018984 160 SFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 160 v~l~GhS~Gg~~a~~~a~~~ 179 (348)
+.|-|.+.||.--+......
T Consensus 71 vFI~Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 71 VFIGGKFIGGASDLMALHKS 90 (104)
T ss_pred EEECCEEEcCHHHHHHHHHc
Confidence 78889999998877665543
No 347
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=29.56 E-value=2.6e+02 Score=21.36 Aligned_cols=56 Identities=9% Similarity=0.088 Sum_probs=35.2
Q ss_pred ecCCCceeEEEEeccCCCCCce-eEEEEecCCCcccccchhHHHHHHhCCceE------EeecC
Q 018984 63 VNSRGVEIFCKSWLPETSQPKG-LVCYCHGYGDTCTFFFEGTARKLASSGYGV------FAMDY 119 (348)
Q Consensus 63 ~~~~g~~l~~~~~~p~~~~~~~-~vv~~HG~~~~~~~~~~~~~~~l~~~g~~v------i~~D~ 119 (348)
...+|..+.|..|...+-.++. +|-++-|+...++. ..++...|.++|+.+ +.++.
T Consensus 40 ~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~-e~P~l~~l~~~~~~~~~y~~t~~IN~ 102 (184)
T TIGR01626 40 IVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEX-NASLIDAIKAAKFPPVKYQTTTIINA 102 (184)
T ss_pred EEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhc-cchHHHHHHHcCCCcccccceEEEEC
Confidence 3335677889888554433332 33344455545454 678889998888888 77763
No 348
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=29.27 E-value=60 Score=27.18 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=17.4
Q ss_pred CeEEEEeChhHHHHHHHHHhC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~ 179 (348)
+-++.|-|.|+.+|..++...
T Consensus 97 p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 97 PRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 447999999999999888643
No 349
>PHA02114 hypothetical protein
Probab=29.24 E-value=94 Score=20.49 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=26.7
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeec
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMD 118 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D 118 (348)
..+||+=-.+..+..- |-.++..|.+.||.|++-.
T Consensus 82 ~gtivldvn~amsr~p-wi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 82 YGTIVLDVNYAMSRAP-WIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred cCeEEEEehhhhccCc-HHHHHHHHHhcCceeeehh
Confidence 3567777677777665 7788889988999998754
No 350
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=29.13 E-value=1.2e+02 Score=23.74 Aligned_cols=41 Identities=10% Similarity=0.145 Sum_probs=28.1
Q ss_pred CCCCCeEEEEeChhHHH----HHHHHHhCCCCcceEEEeCccccccc
Q 018984 155 FRTLPSFLFGQSLGGAV----ALKVHLKQPNAWSGAILVAPMCKIAD 197 (348)
Q Consensus 155 ~~~~~v~l~GhS~Gg~~----a~~~a~~~p~~v~~~vl~~~~~~~~~ 197 (348)
+++.++.+.||.||-.- +.++...+ .|+.+|-+++......
T Consensus 53 YKGk~iSvmg~GmGipS~sIY~~ELi~~y--~Vk~iIRvGt~Gal~~ 97 (236)
T COG0813 53 YKGKKISVMGHGMGIPSISIYSRELITDY--GVKKIIRVGTCGALSE 97 (236)
T ss_pred ecCcEEEEEEecCCCccHHHHHHHHHHHh--CcceEEEEEccccccC
Confidence 45668999999999543 33444444 3889998887766544
No 351
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=28.77 E-value=3.9e+02 Score=23.21 Aligned_cols=88 Identities=17% Similarity=0.125 Sum_probs=0.0
Q ss_pred CceeEEEEecCCCccccc------chhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCC
Q 018984 82 PKGLVCYCHGYGDTCTFF------FEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEF 155 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~~------~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ 155 (348)
+...||++||=.-+..-. |..+++.+.++ -.+-.+|.--.|.-+ .+++-+.-+..++...
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~lip~~D~AYQGF~~-------GleeDa~~lR~~a~~~------ 235 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-GLIPFFDIAYQGFAD-------GLEEDAYALRLFAEVG------ 235 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-CCeeeeehhhhhhcc-------chHHHHHHHHHHHHhC------
Q ss_pred CCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEeCc
Q 018984 156 RTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 191 (348)
Q Consensus 156 ~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~~~ 191 (348)
+-.++..|+.=.+++ |.+||-++.+++.
T Consensus 236 ---~~~lva~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 236 ---PELLVASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred ---CcEEEEehhhhhhhh-----hhhccceeEEEeC
No 352
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.47 E-value=56 Score=22.48 Aligned_cols=21 Identities=38% Similarity=0.645 Sum_probs=18.5
Q ss_pred chhHHHHHHhCCceEEeecCC
Q 018984 100 FEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 100 ~~~~~~~l~~~g~~vi~~D~~ 120 (348)
+-.+++.|+++||.|++.|.-
T Consensus 25 ~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 25 FLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred HHHHHHHHHHcCCcEEEEecc
Confidence 567999999999999999964
No 353
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.38 E-value=54 Score=27.89 Aligned_cols=18 Identities=33% Similarity=0.445 Sum_probs=16.0
Q ss_pred EEEEeChhHHHHHHHHHh
Q 018984 161 FLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~ 178 (348)
.+.|-|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 699999999999999853
No 354
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=28.19 E-value=3e+02 Score=23.60 Aligned_cols=65 Identities=22% Similarity=0.180 Sum_probs=39.8
Q ss_pred hhHHHHHHhCCceEEeecCCCCc------------cCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChh
Q 018984 101 EGTARKLASSGYGVFAMDYPGFG------------LSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLG 168 (348)
Q Consensus 101 ~~~~~~l~~~g~~vi~~D~~G~G------------~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~G 168 (348)
..+.+.|.++|++|.++-+--.- .|.+|- +. ..++.....++.+... ++=++|.|+|
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPG----DP-~~~~~~i~~ik~l~~~------~iPifGICLG 259 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPG----DP-APLDYAIETIKELLGT------KIPIFGICLG 259 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCC----Ch-hHHHHHHHHHHHHhcc------CCCeEEEcHH
Confidence 46788999999999887543211 222221 11 2344555555555443 4579999999
Q ss_pred HHHHHHHH
Q 018984 169 GAVALKVH 176 (348)
Q Consensus 169 g~~a~~~a 176 (348)
=.+...+.
T Consensus 260 HQllalA~ 267 (368)
T COG0505 260 HQLLALAL 267 (368)
T ss_pred HHHHHHhc
Confidence 88755443
No 355
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=28.17 E-value=80 Score=26.43 Aligned_cols=21 Identities=38% Similarity=0.477 Sum_probs=17.1
Q ss_pred CCCeEEEEeChhHHHHHHHHH
Q 018984 157 TLPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 157 ~~~v~l~GhS~Gg~~a~~~a~ 177 (348)
..+..+.|||+|=+.|+..+.
T Consensus 84 ~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 84 VKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCceeecccHhHHHHHHHcc
Confidence 347799999999999887654
No 356
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=28.05 E-value=2.1e+02 Score=22.17 Aligned_cols=58 Identities=28% Similarity=0.281 Sum_probs=32.6
Q ss_pred ceeEEEEecCCCcccc--cchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHH
Q 018984 83 KGLVCYCHGYGDTCTF--FFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSN 148 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 148 (348)
..+|+++||-....-. +.+...+.|.+.|..|-.-.++|-|.+ ...+...++.++|+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~--------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE--------ISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC--------CCHHHHHHHHHHHhh
Confidence 4579999998654321 234566778777877777776655433 233445566666553
No 357
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=27.83 E-value=68 Score=26.59 Aligned_cols=23 Identities=26% Similarity=0.349 Sum_probs=18.7
Q ss_pred CeEEEEeChhHHHHHHHHHhCCC
Q 018984 159 PSFLFGQSLGGAVALKVHLKQPN 181 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a~~~p~ 181 (348)
+-++.|.|.|+.+|..++....+
T Consensus 98 ~~~i~GtSaGAi~aa~~~~~~~~ 120 (298)
T cd07206 98 PRVISGSSAGAIVAALLGTHTDE 120 (298)
T ss_pred CCEEEEEcHHHHHHHHHHcCCcH
Confidence 34799999999999999876443
No 358
>PRK10867 signal recognition particle protein; Provisional
Probab=27.26 E-value=4.5e+02 Score=23.44 Aligned_cols=66 Identities=20% Similarity=0.271 Sum_probs=35.8
Q ss_pred HhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC--Ccce
Q 018984 108 ASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN--AWSG 185 (348)
Q Consensus 108 ~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~--~v~~ 185 (348)
...+|.++.+|-+|....+ +...+.+..+.+.+... .++++.-++-|.-+...+..+.+ .+.+
T Consensus 180 ~~~~~DvVIIDTaGrl~~d---------~~lm~eL~~i~~~v~p~------evllVlda~~gq~av~~a~~F~~~~~i~g 244 (433)
T PRK10867 180 KENGYDVVIVDTAGRLHID---------EELMDELKAIKAAVNPD------EILLVVDAMTGQDAVNTAKAFNEALGLTG 244 (433)
T ss_pred HhcCCCEEEEeCCCCcccC---------HHHHHHHHHHHHhhCCC------eEEEEEecccHHHHHHHHHHHHhhCCCCE
Confidence 3457999999998864321 22334444444433221 45666555555556555554332 3566
Q ss_pred EEE
Q 018984 186 AIL 188 (348)
Q Consensus 186 ~vl 188 (348)
+|+
T Consensus 245 iIl 247 (433)
T PRK10867 245 VIL 247 (433)
T ss_pred EEE
Confidence 666
No 359
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=26.80 E-value=88 Score=26.59 Aligned_cols=18 Identities=33% Similarity=0.209 Sum_probs=14.7
Q ss_pred eEEEEeChhHHHHHHHHH
Q 018984 160 SFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 160 v~l~GhS~Gg~~a~~~a~ 177 (348)
-.++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 468999999988887763
No 360
>PLN02735 carbamoyl-phosphate synthase
Probab=26.34 E-value=2.9e+02 Score=28.19 Aligned_cols=100 Identities=19% Similarity=0.127 Sum_probs=50.4
Q ss_pred eeEEEEeccCC---CCCceeEEEEecCCCcc----cc--cchhHHHHHHhCCceEEeecCCCCccCCCC--CCCCCChhH
Q 018984 69 EIFCKSWLPET---SQPKGLVCYCHGYGDTC----TF--FFEGTARKLASSGYGVFAMDYPGFGLSAGL--HGYIPSFDR 137 (348)
Q Consensus 69 ~l~~~~~~p~~---~~~~~~vv~~HG~~~~~----~~--~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~--~~~~~~~~~ 137 (348)
...|..|...+ ...++.|+++.+++..- +. .-...+..|.+.|+.++++|.-..--|... .+..+...-
T Consensus 557 ~y~y~ty~~~~~~~~~~~kkvlilG~G~~~igq~iefd~~~v~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl 636 (1102)
T PLN02735 557 PYMYSSYDGECESAPTNKKKVLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPL 636 (1102)
T ss_pred CcceeECCCCCCcccCCCceEEEeCccccccCcccccceeHHHHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeC
Confidence 45555664322 12244566665543211 11 112466788888999999987544333211 011111122
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHH
Q 018984 138 LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 138 ~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~ 177 (348)
..+++.++++..+ +..+=-++||..++.++.
T Consensus 637 ~~e~vl~i~~~e~---------~d~Vi~~~Ggq~~l~la~ 667 (1102)
T PLN02735 637 TVEDVLNVIDLER---------PDGIIVQFGGQTPLKLAL 667 (1102)
T ss_pred CHHHHHHHHHHhC---------CCEEEECCCchHHHHHHH
Confidence 3566666666543 333333677777666554
No 361
>COG0218 Predicted GTPase [General function prediction only]
Probab=26.32 E-value=31 Score=26.45 Aligned_cols=26 Identities=12% Similarity=0.339 Sum_probs=20.5
Q ss_pred HhccCCCCcEEEEecCCCCcCCHHHH
Q 018984 269 RRLEKVSLPLLILHGENDTVTDPSVS 294 (348)
Q Consensus 269 ~~~~~i~~P~l~i~g~~D~~~~~~~~ 294 (348)
+.+....+|++++...-|.+-..+..
T Consensus 129 ~~l~~~~i~~~vv~tK~DKi~~~~~~ 154 (200)
T COG0218 129 EFLLELGIPVIVVLTKADKLKKSERN 154 (200)
T ss_pred HHHHHcCCCeEEEEEccccCChhHHH
Confidence 45567789999999999998765543
No 362
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=26.18 E-value=2.7e+02 Score=20.45 Aligned_cols=63 Identities=21% Similarity=0.303 Sum_probs=39.7
Q ss_pred hHHHHHHhCCc-eEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeC-hhHHHHHHHHHhC
Q 018984 102 GTARKLASSGY-GVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQS-LGGAVALKVHLKQ 179 (348)
Q Consensus 102 ~~~~~l~~~g~-~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS-~Gg~~a~~~a~~~ 179 (348)
.+...+...|. +|+.++.+.... ++.+.+++-+.++++.... .++++|++ .|.-++-.+|.+.
T Consensus 49 ~l~~~l~~~G~d~v~~~~~~~~~~--------~~~~~~a~~l~~~~~~~~~-------~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 49 ALRKALAKYGADKVYHIDDPALAE--------YDPEAYADALAELIKEEGP-------DLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHHSTTESEEEEEE-GGGTT--------C-HHHHHHHHHHHHHHHT--------SEEEEESSHHHHHHHHHHHHHH
T ss_pred HHhhhhhhcCCcEEEEecCccccc--------cCHHHHHHHHHHHHHhcCC-------CEEEEcCcCCCCcHHHHHHHHh
Confidence 34455655776 588887553221 3667778888888887433 58888886 5666777777654
No 363
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=26.14 E-value=72 Score=25.06 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=20.0
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
=||++|=|-+.. +..|+++||.|+.+|+-
T Consensus 40 rvLvPgCG~g~D------~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 40 RVLVPGCGKGYD------MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp EEEETTTTTSCH------HHHHHHTTEEEEEEES-
T ss_pred eEEEeCCCChHH------HHHHHHCCCeEEEEecC
Confidence 466676554422 35688899999999973
No 364
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=26.09 E-value=70 Score=23.35 Aligned_cols=12 Identities=25% Similarity=0.595 Sum_probs=11.0
Q ss_pred eEEEEeChhHHH
Q 018984 160 SFLFGQSLGGAV 171 (348)
Q Consensus 160 v~l~GhS~Gg~~ 171 (348)
.+++|.|.|+++
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 689999999987
No 365
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.09 E-value=61 Score=26.72 Aligned_cols=19 Identities=32% Similarity=0.452 Sum_probs=16.7
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 018984 161 FLFGQSLGGAVALKVHLKQ 179 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~ 179 (348)
.++|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7999999999999998653
No 366
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=25.95 E-value=3.2e+02 Score=21.20 Aligned_cols=38 Identities=11% Similarity=-0.036 Sum_probs=23.1
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCC
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
.+.|+++.-.......+...+.+.+.+.|..+..+...
T Consensus 29 ~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~ 66 (210)
T cd03129 29 GARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLI 66 (210)
T ss_pred CCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEecc
Confidence 45577776555443334556667777778877655543
No 367
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=25.77 E-value=1.1e+02 Score=27.10 Aligned_cols=40 Identities=18% Similarity=0.155 Sum_probs=24.2
Q ss_pred CcEEEEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCCCccccc
Q 018984 276 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 320 (348)
Q Consensus 276 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 320 (348)
..+++.+|+.|++...... +.. .......+|||++|..-+
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~-~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDS-SDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-S-SSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCC----CCC-CCCcccEEECCCeeeccc
Confidence 4799999999998765522 222 245566789999997544
No 368
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=25.67 E-value=57 Score=27.21 Aligned_cols=17 Identities=29% Similarity=0.548 Sum_probs=15.4
Q ss_pred EEEEeChhHHHHHHHHH
Q 018984 161 FLFGQSLGGAVALKVHL 177 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~ 177 (348)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 69999999999999875
No 369
>PRK09936 hypothetical protein; Provisional
Probab=25.57 E-value=2e+02 Score=23.83 Aligned_cols=27 Identities=15% Similarity=0.469 Sum_probs=24.6
Q ss_pred chhHHHHHHhCCceEEeecCCCCccCC
Q 018984 100 FEGTARKLASSGYGVFAMDYPGFGLSA 126 (348)
Q Consensus 100 ~~~~~~~l~~~g~~vi~~D~~G~G~s~ 126 (348)
|+.+.+.+...|++.+.+.+-++|.++
T Consensus 40 Wq~~~~~~~~~G~~tLivQWt~yG~~~ 66 (296)
T PRK09936 40 WQGLWSQLRLQGFDTLVVQWTRYGDAD 66 (296)
T ss_pred HHHHHHHHHHcCCcEEEEEeeeccCCC
Confidence 788889998899999999999999884
No 370
>PTZ00445 p36-lilke protein; Provisional
Probab=25.43 E-value=2.3e+02 Score=22.27 Aligned_cols=65 Identities=15% Similarity=0.025 Sum_probs=37.7
Q ss_pred chhHHHHHHhCCceEEeecCCCC------ccCCCCC-CCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChh
Q 018984 100 FEGTARKLASSGYGVFAMDYPGF------GLSAGLH-GYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLG 168 (348)
Q Consensus 100 ~~~~~~~l~~~g~~vi~~D~~G~------G~s~~~~-~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~G 168 (348)
-..+.+.|.+.|+.+++.|+=.. |.-..+. ....-......++..++..+... +-++.++-+|--
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~----~I~v~VVTfSd~ 102 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS----NIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC----CCeEEEEEccch
Confidence 45677889889999999997543 1111111 00001122234566666666543 237899999854
No 371
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=24.78 E-value=2.3e+02 Score=26.22 Aligned_cols=49 Identities=18% Similarity=0.302 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEe------ChhHHHHHHHHHhCCCCcceEEEeCc
Q 018984 138 LVDDVIEHYSNIKEYPEFRTLPSFLFGQ------SLGGAVALKVHLKQPNAWSGAILVAP 191 (348)
Q Consensus 138 ~~~d~~~~l~~l~~~~~~~~~~v~l~Gh------S~Gg~~a~~~a~~~p~~v~~~vl~~~ 191 (348)
-++.+-.++..+... ..+|+++|| |.|+.+++..-+..-.+ .+-+.++|
T Consensus 322 RaRvis~al~d~i~e----~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 322 RARVISTALSDIIKE----SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHHhh----cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 356666666665544 238999999 68999998766554443 55666665
No 372
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=24.74 E-value=1.8e+02 Score=20.87 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=22.4
Q ss_pred EecCCCcccccchhHHHHHHhCCceEEeecCC
Q 018984 89 CHGYGDTCTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 89 ~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
+=|........-..+.++|.++||+|+-++-.
T Consensus 21 vVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP~ 52 (140)
T COG1832 21 VVGASDKPDRPSYRVAKYLQQKGYRVIPVNPK 52 (140)
T ss_pred EEecCCCCCccHHHHHHHHHHCCCEEEeeCcc
Confidence 33555554443346889999999999988853
No 373
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=24.73 E-value=1.5e+02 Score=24.08 Aligned_cols=84 Identities=19% Similarity=0.269 Sum_probs=43.6
Q ss_pred hHHHHHHhCCceEEeecCCCC-ccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHH----HHH
Q 018984 102 GTARKLASSGYGVFAMDYPGF-GLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVAL----KVH 176 (348)
Q Consensus 102 ~~~~~l~~~g~~vi~~D~~G~-G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~----~~a 176 (348)
..+..+++.|-.++++.+--. |.+.+... ..++++.++.+.++.+..... +..++++.| ||-++. .+.
T Consensus 161 e~A~~M~~AGaDiiv~H~GlT~gG~~Ga~~-~~sl~~a~~~~~~i~~aa~~v----~~dii~l~h--GGPI~~p~D~~~~ 233 (268)
T PF09370_consen 161 EQARAMAEAGADIIVAHMGLTTGGSIGAKT-ALSLEEAAERIQEIFDAARAV----NPDIIVLCH--GGPIATPEDAQYV 233 (268)
T ss_dssp HHHHHHHHHT-SEEEEE-SS-----------S--HHHHHHHHHHHHHHHHCC-----TT-EEEEE--CTTB-SHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCccCCCCcCccc-cCCHHHHHHHHHHHHHHHHHh----CCCeEEEEe--CCCCCCHHHHHHH
Confidence 345677788999999886332 22222222 248888888888888877654 225777777 787753 233
Q ss_pred HhCCCCcceEEEeCcc
Q 018984 177 LKQPNAWSGAILVAPM 192 (348)
Q Consensus 177 ~~~p~~v~~~vl~~~~ 192 (348)
.++-..+.+.+--++.
T Consensus 234 l~~t~~~~Gf~G~Ss~ 249 (268)
T PF09370_consen 234 LRNTKGIHGFIGASSM 249 (268)
T ss_dssp HHH-TTEEEEEESTTT
T ss_pred HhcCCCCCEEecccch
Confidence 3333336666655443
No 374
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=24.53 E-value=1.3e+02 Score=21.90 Aligned_cols=18 Identities=33% Similarity=0.348 Sum_probs=16.1
Q ss_pred CeEEEEeChhHHHHHHHH
Q 018984 159 PSFLFGQSLGGAVALKVH 176 (348)
Q Consensus 159 ~v~l~GhS~Gg~~a~~~a 176 (348)
.-.+.|.|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 457999999999999998
No 375
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=24.50 E-value=1.8e+02 Score=24.06 Aligned_cols=48 Identities=10% Similarity=0.004 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCCCcceEEEe
Q 018984 138 LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILV 189 (348)
Q Consensus 138 ~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~~v~~~vl~ 189 (348)
...-+..+++.+..+ ++..+.=+|..+||+. +.+|.++..+|.|+.+.
T Consensus 57 Q~~k~~~~~~kl~L~---~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 57 QRAKLDLILEKLGLK---PGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHHhcCCC---CCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCC
Confidence 344555666666665 4557778999998876 55677776667776654
No 376
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=24.29 E-value=4.2e+02 Score=22.10 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=21.9
Q ss_pred EEEEecCCCc-ccccchhHHHHHHhCCceEEeecCCC
Q 018984 86 VCYCHGYGDT-CTFFFEGTARKLASSGYGVFAMDYPG 121 (348)
Q Consensus 86 vv~~HG~~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G 121 (348)
+++++|.+.. .......+++.|.++|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4445554322 12235567888888899888776544
No 377
>KOG1969 consensus DNA replication checkpoint protein CHL12/CTF18 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=24.29 E-value=3.4e+02 Score=26.04 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=25.4
Q ss_pred CCceeEEEEecCCCcccccchhHHHHHHh-CCceEEeecC
Q 018984 81 QPKGLVCYCHGYGDTCTFFFEGTARKLAS-SGYGVFAMDY 119 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~~~~~~~~l~~-~g~~vi~~D~ 119 (348)
.|..-|+++||-+|-+.. .++.-.++ .||.|+-++.
T Consensus 323 RP~kKilLL~GppGlGKT---TLAHViAkqaGYsVvEINA 359 (877)
T KOG1969|consen 323 RPPKKILLLCGPPGLGKT---TLAHVIAKQAGYSVVEINA 359 (877)
T ss_pred CCccceEEeecCCCCChh---HHHHHHHHhcCceEEEecc
Confidence 344569999999887654 34444544 4999998874
No 378
>PRK05665 amidotransferase; Provisional
Probab=24.21 E-value=2.1e+02 Score=22.90 Aligned_cols=36 Identities=14% Similarity=0.136 Sum_probs=25.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHH
Q 018984 135 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVH 176 (348)
Q Consensus 135 ~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a 176 (348)
-..++..+.++|+.+... .+-++|.|+|..+....+
T Consensus 73 ~~pwi~~l~~~i~~~~~~------~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 73 TDPWIQTLKTYLLKLYER------GDKLLGVCFGHQLLALLL 108 (240)
T ss_pred cchHHHHHHHHHHHHHhc------CCCEEEEeHHHHHHHHHh
Confidence 345667777777776544 345999999998876554
No 379
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=24.18 E-value=1.1e+02 Score=27.93 Aligned_cols=82 Identities=18% Similarity=0.173 Sum_probs=41.4
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCc-------eEEeecCCCCccCCCCCCCCCChhHH-----------HHHHHHHHH
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGY-------GVFAMDYPGFGLSAGLHGYIPSFDRL-----------VDDVIEHYS 147 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~-------~vi~~D~~G~G~s~~~~~~~~~~~~~-----------~~d~~~~l~ 147 (348)
-|++-|.|...--.-+.+...+...|. +++.+|..|-=..+........-..+ ..++.++++
T Consensus 299 riv~~GAGsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v~ 378 (559)
T PTZ00317 299 RIVFFGAGSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVVR 378 (559)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHHh
Confidence 344456554432213444555555676 89999988853222211000000011 124555555
Q ss_pred HHHcCCCCCCCCeEEEEeCh-hHHHHHHH
Q 018984 148 NIKEYPEFRTLPSFLFGQSL-GGAVALKV 175 (348)
Q Consensus 148 ~l~~~~~~~~~~v~l~GhS~-Gg~~a~~~ 175 (348)
.++ +-+|+|-|- ||.+.-.+
T Consensus 379 ~~K--------PtvLIG~S~~~g~Ft~ev 399 (559)
T PTZ00317 379 FVK--------PTALLGLSGVGGVFTEEV 399 (559)
T ss_pred ccC--------CCEEEEecCCCCCCCHHH
Confidence 443 569999996 67554443
No 380
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=24.05 E-value=3.3e+02 Score=22.00 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=15.1
Q ss_pred EEecCCCCcCCHHHHHHHHHHhcCCCceEEEcCCC
Q 018984 280 ILHGENDTVTDPSVSKALYEKASSKDKKCILYKDA 314 (348)
Q Consensus 280 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (348)
+|.|..|........+.+.+....++.++.++|-+
T Consensus 3 ~iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptA 37 (250)
T TIGR02069 3 IIGGAEDKVGDREILREFVSRAGGEDAIIVIITSA 37 (250)
T ss_pred EEeCccccCChHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34444444333333444444433344455555544
No 381
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=24.04 E-value=2.8e+02 Score=19.95 Aligned_cols=57 Identities=12% Similarity=0.107 Sum_probs=32.1
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcc---cc--cchhHHHHHHhCCceEEeec
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTC---TF--FFEGTARKLASSGYGVFAMD 118 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~---~~--~~~~~~~~l~~~g~~vi~~D 118 (348)
.......+.+|..+....+ +.+++||++.+...+. .. .+..+.+.+.+.|..++++.
T Consensus 10 ~p~f~l~~~~G~~~~l~~~-----~gk~~ll~f~~~~~~p~C~~~~~~l~~~~~~~~~~~v~vi~Is 71 (154)
T PRK09437 10 APKFSLPDQDGEQVSLTDF-----QGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVVVLGIS 71 (154)
T ss_pred CCCcEeeCCCCCEEeHHHh-----CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 3444556677876655433 2256677765432221 11 13445566767889999996
No 382
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=23.88 E-value=72 Score=25.24 Aligned_cols=29 Identities=21% Similarity=0.281 Sum_probs=19.7
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
=||+.|=|-+. =+..|+++||.|+.+|+-
T Consensus 46 rvLvPgCGkg~------D~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSI------DMLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChH------HHHHHHhCCCcEEEEecC
Confidence 45666654332 235688899999999974
No 383
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=23.76 E-value=1.5e+02 Score=22.12 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=19.9
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeec
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMD 118 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D 118 (348)
-|++.|.|.+... -..+...|..-|..+...+
T Consensus 32 ~I~i~G~G~S~~~-A~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGLV-GKAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHHH-HHHHHHHHHhCCCeEEEeC
Confidence 4677777766432 3445566666688777764
No 384
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=23.74 E-value=2.5e+02 Score=23.66 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=26.5
Q ss_pred CCCCCeEEEEeChh--HHHHHHHHHhCCCCcceEEEeCcc
Q 018984 155 FRTLPSFLFGQSLG--GAVALKVHLKQPNAWSGAILVAPM 192 (348)
Q Consensus 155 ~~~~~v~l~GhS~G--g~~a~~~a~~~p~~v~~~vl~~~~ 192 (348)
+++.+++|+|-|-= =.+=..++..+|++|.++.+=+-.
T Consensus 275 ~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 275 YPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred CCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 45669999999822 133445677899999988765543
No 385
>PRK00131 aroK shikimate kinase; Reviewed
Probab=23.73 E-value=92 Score=22.93 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=22.3
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhC-CceEEeecC
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDY 119 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~ 119 (348)
+.+|++.|.++++.. .++..|++. |+.++-.|.
T Consensus 4 ~~~i~l~G~~GsGKs---tla~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 4 GPNIVLIGFMGAGKS---TIGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCeEEEEcCCCCCHH---HHHHHHHHHhCCCEEEChH
Confidence 458888998888754 466666654 676666553
No 386
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=23.57 E-value=1.1e+02 Score=22.77 Aligned_cols=33 Identities=30% Similarity=0.193 Sum_probs=22.9
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEe
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFA 116 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~ 116 (348)
.+.|+++-|-|.+... =-..+++|..+|+.|.+
T Consensus 25 ~~~v~il~G~GnNGgD-gl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 25 GPRVLILCGPGNNGGD-GLVAARHLANRGYNVTV 57 (169)
T ss_dssp T-EEEEEE-SSHHHHH-HHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEECCCCChHH-HHHHHHHHHHCCCeEEE
Confidence 4557777787766654 23578899899999887
No 387
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=23.47 E-value=4.7e+02 Score=22.31 Aligned_cols=75 Identities=20% Similarity=0.133 Sum_probs=47.7
Q ss_pred HHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC--Cc
Q 018984 106 KLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN--AW 183 (348)
Q Consensus 106 ~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~--~v 183 (348)
+-..+|+.|+.+|--|.= .+-..+.+++..+.+-+..........+.++--+.-|.-++.-|..+.+ .+
T Consensus 216 ~Akar~~DvvliDTAGRL---------hnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l 286 (340)
T COG0552 216 AAKARGIDVVLIDTAGRL---------HNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGL 286 (340)
T ss_pred HHHHcCCCEEEEeCcccc---------cCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCC
Confidence 333567888888876642 1333445666666655544422222257777799999999988877654 47
Q ss_pred ceEEEe
Q 018984 184 SGAILV 189 (348)
Q Consensus 184 ~~~vl~ 189 (348)
+|+|+-
T Consensus 287 ~GiIlT 292 (340)
T COG0552 287 DGIILT 292 (340)
T ss_pred ceEEEE
Confidence 788874
No 388
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=23.23 E-value=1.2e+02 Score=24.15 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=20.9
Q ss_pred CceeEEEEecCCCcccc----cchhHHHHHHhCCceEEee
Q 018984 82 PKGLVCYCHGYGDTCTF----FFEGTARKLASSGYGVFAM 117 (348)
Q Consensus 82 ~~~~vv~~HG~~~~~~~----~~~~~~~~l~~~g~~vi~~ 117 (348)
.++.|++.+|.+..... .|..+++.|.+.++.|+.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE
Confidence 35678887877664433 2667888888888777654
No 389
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=23.18 E-value=88 Score=25.04 Aligned_cols=20 Identities=30% Similarity=0.197 Sum_probs=17.8
Q ss_pred EEEEeChhHHHHHHHHHhCC
Q 018984 161 FLFGQSLGGAVALKVHLKQP 180 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~~~p 180 (348)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999988654
No 390
>PRK13529 malate dehydrogenase; Provisional
Probab=22.94 E-value=1.3e+02 Score=27.54 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=22.3
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCc-------eEEeecCCCC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGY-------GVFAMDYPGF 122 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~-------~vi~~D~~G~ 122 (348)
-+++.|.|...--.-+.+...+...|. +++.+|..|.
T Consensus 297 riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GL 340 (563)
T PRK13529 297 RIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGL 340 (563)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCe
Confidence 344556664432223445555555676 8999999885
No 391
>PTZ00256 glutathione peroxidase; Provisional
Probab=22.83 E-value=2.5e+02 Score=21.17 Aligned_cols=57 Identities=12% Similarity=0.151 Sum_probs=31.1
Q ss_pred ceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCccccc------chhHHHHHHhCCceEEeecC
Q 018984 57 TEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFF------FEGTARKLASSGYGVFAMDY 119 (348)
Q Consensus 57 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~------~~~~~~~l~~~g~~vi~~D~ 119 (348)
.......+.+|..+....+ .++++||++. +...+..+ +..+.+.+.++|+.|+++..
T Consensus 20 ~p~f~l~d~~G~~vsLs~~-----~Gk~vvlv~n-~atwCp~C~~e~p~l~~l~~~~~~~gv~vv~vs~ 82 (183)
T PTZ00256 20 FFEFEAIDIDGQLVQLSKF-----KGKKAIIVVN-VACKCGLTSDHYTQLVELYKQYKSQGLEILAFPC 82 (183)
T ss_pred ccceEeEcCCCCEEeHHHh-----CCCcEEEEEE-ECCCCCchHHHHHHHHHHHHHHhhCCcEEEEEec
Confidence 4445566778876665444 2345555554 32211111 23344555567899999864
No 392
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=22.69 E-value=1.8e+02 Score=21.53 Aligned_cols=41 Identities=17% Similarity=0.104 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeC--hhHHHHHHHHHh
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQS--LGGAVALKVHLK 178 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS--~Gg~~a~~~a~~ 178 (348)
.-....+.+++++.... ..+.+++++|.| .|--+++.+..+
T Consensus 17 PcTp~aii~lL~~~~~~--l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 17 PCTPLAIIELLEYYGID--LEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp -HHHHHHHHHHHHTT-S--TTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhcCCC--CCCCEEEEECCcCCCChHHHHHHHhC
Confidence 34466777888876543 567799999999 577777777654
No 393
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=22.14 E-value=1.3e+02 Score=23.99 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=21.5
Q ss_pred EEEEecCCCcccccchhH-HHHHHhC-CceEEeecC
Q 018984 86 VCYCHGYGDTCTFFFEGT-ARKLASS-GYGVFAMDY 119 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~-~~~l~~~-g~~vi~~D~ 119 (348)
.|.+-|=|++.......+ +..|.++ ||+|+++|-
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDa 37 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDA 37 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeC
Confidence 355667666655434444 5555555 599999984
No 394
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=22.02 E-value=3.1e+02 Score=19.72 Aligned_cols=23 Identities=26% Similarity=0.125 Sum_probs=16.7
Q ss_pred cchhHHHHHHhCCceEEeecCCC
Q 018984 99 FFEGTARKLASSGYGVFAMDYPG 121 (348)
Q Consensus 99 ~~~~~~~~l~~~g~~vi~~D~~G 121 (348)
+...+++.|.++|+.|..+-...
T Consensus 17 ~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 17 VVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp HHHHHHHHHHHTT-EEEEEESS-
T ss_pred HHHHHHHHHHHCCCEEEEEEcCC
Confidence 46678999999999998885443
No 395
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=21.85 E-value=1.3e+02 Score=24.81 Aligned_cols=30 Identities=27% Similarity=0.645 Sum_probs=23.3
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCC
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
-|.|+|.-|.++ ..+.|+..||.|+..|+-
T Consensus 252 vPmi~fakG~g~--------~Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 252 VPMILFAKGSGG--------ALEELAQTGYDVVGLDWT 281 (359)
T ss_pred CceEEEEcCcch--------HHHHHHhcCCcEEeeccc
Confidence 588899887643 346788889999999974
No 396
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=21.81 E-value=93 Score=25.87 Aligned_cols=19 Identities=32% Similarity=0.387 Sum_probs=15.8
Q ss_pred CCceeEEEEecCCCccccc
Q 018984 81 QPKGLVCYCHGYGDTCTFF 99 (348)
Q Consensus 81 ~~~~~vv~~HG~~~~~~~~ 99 (348)
..+|.++=+||+.|++..|
T Consensus 107 p~KPLvLSfHG~tGTGKN~ 125 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNY 125 (344)
T ss_pred CCCCeEEEecCCCCCchhH
Confidence 4489999999999998763
No 397
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=21.34 E-value=3.4e+02 Score=21.90 Aligned_cols=52 Identities=15% Similarity=0.200 Sum_probs=34.7
Q ss_pred eeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCC
Q 018984 58 EESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 58 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
.+..+++++|+++... ..+|=|+--+....+. ..-+++|.+.||.|+..-..
T Consensus 31 rrIVlVTSGGTtVPLE---------~ntVRFiDNFSaGtRG--AaSAE~Fl~agYaVIFl~R~ 82 (302)
T KOG2728|consen 31 RRIVLVTSGGTTVPLE---------QNTVRFIDNFSAGTRG--AASAEYFLAAGYAVIFLYRE 82 (302)
T ss_pred ceEEEEecCCeEeecc---------cCceEeeeccCcCCcc--chhHHHHHhCCceEEEEeec
Confidence 4467788888876653 2358888777544332 34567888999999877544
No 398
>PRK06523 short chain dehydrogenase; Provisional
Probab=21.33 E-value=2.6e+02 Score=22.27 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=22.8
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
.+++.|..+.-. ..+++.|+++|++|+..+..
T Consensus 11 ~vlItGas~gIG---~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 11 RALVTGGTKGIG---AATVARLLEAGARVVTTARS 42 (260)
T ss_pred EEEEECCCCchh---HHHHHHHHHCCCEEEEEeCC
Confidence 456666554433 36888898999999998754
No 399
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=21.24 E-value=1.3e+02 Score=18.97 Aligned_cols=19 Identities=32% Similarity=0.342 Sum_probs=15.7
Q ss_pred chhHHHHHHhCCceEEeec
Q 018984 100 FEGTARKLASSGYGVFAMD 118 (348)
Q Consensus 100 ~~~~~~~l~~~g~~vi~~D 118 (348)
-..++..|++.|++|+.+|
T Consensus 16 ~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 16 AANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHCCCeEEEEC
Confidence 4567788888899999999
No 400
>PRK07053 glutamine amidotransferase; Provisional
Probab=21.23 E-value=4.3e+02 Score=21.06 Aligned_cols=82 Identities=17% Similarity=0.087 Sum_probs=44.6
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccC--------------CCCCC-CCCChhHHHHHHHHHHHH
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLS--------------AGLHG-YIPSFDRLVDDVIEHYSN 148 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s--------------~~~~~-~~~~~~~~~~d~~~~l~~ 148 (348)
+++|+-|--..+. ..+...|.+.|+.+-.+.... +.. .++.. +......++.++.++++.
T Consensus 4 ~ilviqh~~~e~~----g~i~~~L~~~g~~~~v~~~~~-~~~~~~~~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~i~~ 78 (234)
T PRK07053 4 TAVAIRHVAFEDL----GSFEQVLGARGYRVRYVDVGV-DDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALLRQ 78 (234)
T ss_pred eEEEEECCCCCCC----hHHHHHHHHCCCeEEEEecCC-CccCCCCccCCCEEEECCCCCCCCCCCcCCcHHHHHHHHHH
Confidence 4677777665543 346677777776665443211 100 01111 000111245566677776
Q ss_pred HHcCCCCCCCCeEEEEeChhHHHHHHHH
Q 018984 149 IKEYPEFRTLPSFLFGQSLGGAVALKVH 176 (348)
Q Consensus 149 l~~~~~~~~~~v~l~GhS~Gg~~a~~~a 176 (348)
.... .+-++|.|+|..+.....
T Consensus 79 ~~~~------~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 79 RLAA------GLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHHC------CCCEEEECccHHHHHHHc
Confidence 5543 456999999998877665
No 401
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=21.22 E-value=1.7e+02 Score=24.54 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=22.4
Q ss_pred ceeEEEEecCCCccccc----chhHHHHHHhCCceEEe
Q 018984 83 KGLVCYCHGYGDTCTFF----FEGTARKLASSGYGVFA 116 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~----~~~~~~~l~~~g~~vi~ 116 (348)
.+.|+++||.......| |..+++.+.++|+.++.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 45677788875433332 56777888777888764
No 402
>PRK00889 adenylylsulfate kinase; Provisional
Probab=21.19 E-value=1.8e+02 Score=21.61 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=23.5
Q ss_pred eeEEEEecCCCcccc-cchhHHHHHHhCCceEEeecC
Q 018984 84 GLVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDY 119 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~ 119 (348)
+.++.+.|.++++.. .-..++..|...|..++.+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 458888898877654 234455666566777777753
No 403
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=21.19 E-value=5.9e+02 Score=22.67 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=37.4
Q ss_pred HHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHhCCC--Cc
Q 018984 106 KLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN--AW 183 (348)
Q Consensus 106 ~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~~p~--~v 183 (348)
.+...+|.++.+|-+|....+ +...+.+..+.+.+... .+++|--++-|.-+...|..+-+ .+
T Consensus 177 ~~~~~~~DvVIIDTaGr~~~d---------~~l~~eL~~i~~~~~p~------e~lLVvda~tgq~~~~~a~~f~~~v~i 241 (428)
T TIGR00959 177 YAKENGFDVVIVDTAGRLQID---------EELMEELAAIKEILNPD------EILLVVDAMTGQDAVNTAKTFNERLGL 241 (428)
T ss_pred HHHhcCCCEEEEeCCCccccC---------HHHHHHHHHHHHhhCCc------eEEEEEeccchHHHHHHHHHHHhhCCC
Confidence 333567999999998864321 22344444444433222 45666555555555555554322 36
Q ss_pred ceEEEe
Q 018984 184 SGAILV 189 (348)
Q Consensus 184 ~~~vl~ 189 (348)
.++|+-
T Consensus 242 ~giIlT 247 (428)
T TIGR00959 242 TGVVLT 247 (428)
T ss_pred CEEEEe
Confidence 666654
No 404
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=21.17 E-value=1.1e+02 Score=23.05 Aligned_cols=34 Identities=18% Similarity=0.031 Sum_probs=23.5
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecCCCC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGF 122 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~ 122 (348)
+|.+-|..+++.+ .++..|.+.|+.++..|.-.+
T Consensus 1 ii~itG~~gsGKs---t~~~~l~~~g~~~i~~D~~~~ 34 (179)
T cd02022 1 IIGLTGGIGSGKS---TVAKLLKELGIPVIDADKIAH 34 (179)
T ss_pred CEEEECCCCCCHH---HHHHHHHHCCCCEEecCHHHH
Confidence 3667777666554 466777778999988886544
No 405
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=21.16 E-value=2.7e+02 Score=21.75 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHH--------HhCCCCcceEEEeCcc
Q 018984 138 LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVH--------LKQPNAWSGAILVAPM 192 (348)
Q Consensus 138 ~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a--------~~~p~~v~~~vl~~~~ 192 (348)
..+++.+.++....+ .+....+++-||+||..+.-++ ..+|+.....+.+-|.
T Consensus 106 ~~~~~~~~ir~~~e~--~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~~~~~~~ilP~ 166 (216)
T PF00091_consen 106 ALEEILEQIRKEIEK--CDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKKPIISFSILPF 166 (216)
T ss_dssp HHHHHHHHHHHHHHT--STTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE-C
T ss_pred cccccccccchhhcc--ccccccceecccccceeccccccccchhhhccccccceeecccccc
Confidence 344555555554433 2334678999999887543222 3456654444444444
No 406
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=21.15 E-value=40 Score=24.38 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=24.3
Q ss_pred EEEEecCCC---cccccchhHHHHHHhCCceEEeecCCCC
Q 018984 86 VCYCHGYGD---TCTFFFEGTARKLASSGYGVFAMDYPGF 122 (348)
Q Consensus 86 vv~~HG~~~---~~~~~~~~~~~~l~~~g~~vi~~D~~G~ 122 (348)
|+++.|... +.....+.+.+.+.+.|+.+-.+|+..+
T Consensus 3 ilii~gS~r~~~~t~~l~~~~~~~l~~~g~e~~~i~l~~~ 42 (152)
T PF03358_consen 3 ILIINGSPRKNSNTRKLAEAVAEQLEEAGAEVEVIDLADY 42 (152)
T ss_dssp EEEEESSSSTTSHHHHHHHHHHHHHHHTTEEEEEEECTTS
T ss_pred EEEEECcCCCCCHHHHHHHHHHHHHHHcCCEEEEEecccc
Confidence 677777652 2222344556666667899999998865
No 407
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=21.11 E-value=4e+02 Score=22.91 Aligned_cols=61 Identities=16% Similarity=0.102 Sum_probs=33.6
Q ss_pred ceeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHc
Q 018984 83 KGLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKE 151 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~ 151 (348)
..+|+.+-|+-.|+ --+..|.++||.|+.+-+..+..... . .....+...|...+.+.++.
T Consensus 4 ~kV~v~mSGGVDSS-----VaA~lLk~QGyeViGl~m~~~~~~~~-~--~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 4 KKVLVGMSGGVDSS-----VAAYLLKEQGYEVIGLFMKNWDEDGG-G--GCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred cEEEEEccCCHHHH-----HHHHHHHHcCCeEEEEEEEeeccCCC-C--cCCchhHHHHHHHHHHHhCC
Confidence 34566666654332 12345667899999998887664111 1 12333345556666655544
No 408
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=21.11 E-value=1.1e+02 Score=24.96 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=27.4
Q ss_pred eEEEEecCCCcccc-cchhHHHHHHhCCceEEeecCCCCccC
Q 018984 85 LVCYCHGYGDTCTF-FFEGTARKLASSGYGVFAMDYPGFGLS 125 (348)
Q Consensus 85 ~vv~~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s 125 (348)
+|.+. |=||.+.. .-..++..|++.|++|+.+|+=-.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 45555 65554432 245688899999999999998666543
No 409
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=20.91 E-value=1.6e+02 Score=24.86 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=24.6
Q ss_pred ceeEEEEec-CCCcccc----cchhHHHHHHhCCceEEee
Q 018984 83 KGLVCYCHG-YGDTCTF----FFEGTARKLASSGYGVFAM 117 (348)
Q Consensus 83 ~~~vv~~HG-~~~~~~~----~~~~~~~~l~~~g~~vi~~ 117 (348)
+|.|++.|| ..+.... .|..+++.|.++|+.|+.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~ 214 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLF 214 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 478888888 4323322 2678888998888777765
No 410
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=20.90 E-value=1.1e+02 Score=23.17 Aligned_cols=29 Identities=28% Similarity=0.227 Sum_probs=18.4
Q ss_pred EEecCCCcccccchhHHHHHHhCCceEEeecCC
Q 018984 88 YCHGYGDTCTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 88 ~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
.+.|.|--+ -+++..|++.|+.|+.+|.-
T Consensus 4 ~ViGlGyvG----l~~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 4 AVIGLGYVG----LPLAAALAEKGHQVIGVDID 32 (185)
T ss_dssp EEE--STTH----HHHHHHHHHTTSEEEEE-S-
T ss_pred EEECCCcch----HHHHHHHHhCCCEEEEEeCC
Confidence 344665432 25778899999999999964
No 411
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include pyrophosphate-dependent phosphofructokinases. These are found in bacteria as well as plants. These may be dimeric nonallosteric enzymes as in bacteria or allosteric heterotetramers as in plants.
Probab=20.76 E-value=3.4e+02 Score=25.09 Aligned_cols=91 Identities=16% Similarity=0.037 Sum_probs=45.9
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCCCCccCCCCC---CCCCChhHHHHHHHHHHHHHHcCCCCCCCCe
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYPGFGLSAGLH---GYIPSFDRLVDDVIEHYSNIKEYPEFRTLPS 160 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~---~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v 160 (348)
..+|++.|-++... -..+.+++.+.|+.+-++-.|..-..+-.. .....++..++-+.+++..+.........++
T Consensus 168 d~LviIGGddS~~~--A~~Lae~~~~~g~~i~VIGVPKTIDNDl~~t~id~s~GFdTA~k~~a~~I~ni~~Da~s~~~~~ 245 (550)
T cd00765 168 DALVVIGGDDSNTN--AALLAENFRSKGLKTRVIGVPKTIDGDLKNKEIETSFGFDTATKIYSELIGNVMRDARSTGKYW 245 (550)
T ss_pred CEEEEeCCchHHHH--HHHHHHHHHhcCCCceEEEEeeeecCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCcE
Confidence 35777766654433 346777777778544444334332222111 1223667777766666666653211111122
Q ss_pred ---EEEEeChhHHHHHHHHH
Q 018984 161 ---FLFGQSLGGAVALKVHL 177 (348)
Q Consensus 161 ---~l~GhS~Gg~~a~~~a~ 177 (348)
=++|-+. |++|+..+.
T Consensus 246 ~~VEvMGR~a-G~LAl~~aL 264 (550)
T cd00765 246 HFVKLMGRSA-SHIALECAL 264 (550)
T ss_pred EEEEeCCCch-HHHHHHHHH
Confidence 2667764 556665544
No 412
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=20.68 E-value=2.9e+02 Score=18.85 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=46.6
Q ss_pred eEEEEecCCCcccccchhHHHHHHhC-CceEEeecCCCCccCCCCCCCCCChhHHHHHHHHHHHHHHcCCCCCCCCeEEE
Q 018984 85 LVCYCHGYGDTCTFFFEGTARKLASS-GYGVFAMDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLF 163 (348)
Q Consensus 85 ~vv~~HG~~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~v~l~ 163 (348)
.||.-||.... . ....++.+... -..+.++++.-. .+.+++.+.+.+.++.+... ..++++
T Consensus 2 iii~sHG~~A~-g--~~~~~~~i~G~~~~~i~~~~~~~~----------~~~~~~~~~l~~~i~~~~~~-----~~vlil 63 (116)
T PF03610_consen 2 IIIASHGSLAE-G--LLESAEMILGEDQDNIEAVDLYPD----------ESIEDFEEKLEEAIEELDEG-----DGVLIL 63 (116)
T ss_dssp EEEEEETTHHH-H--HHHHHHHHHTSTCSSEEEEEETTT----------SCHHHHHHHHHHHHHHCCTT-----SEEEEE
T ss_pred EEEEECcHHHH-H--HHHHHHHHcCCCcccEEEEECcCC----------CCHHHHHHHHHHHHHhccCC-----CcEEEE
Confidence 58889993322 2 44566666655 346777765411 37888888888888766432 257777
Q ss_pred EeChhHHHHHHHHH
Q 018984 164 GQSLGGAVALKVHL 177 (348)
Q Consensus 164 GhS~Gg~~a~~~a~ 177 (348)
.-=.||......+.
T Consensus 64 ~Dl~ggsp~n~a~~ 77 (116)
T PF03610_consen 64 TDLGGGSPFNEAAR 77 (116)
T ss_dssp ESSTTSHHHHHHHH
T ss_pred eeCCCCccchHHHH
Confidence 76677665554443
No 413
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.52 E-value=70 Score=26.70 Aligned_cols=17 Identities=29% Similarity=0.475 Sum_probs=15.1
Q ss_pred EEEEeChhHHHHHHHHH
Q 018984 161 FLFGQSLGGAVALKVHL 177 (348)
Q Consensus 161 ~l~GhS~Gg~~a~~~a~ 177 (348)
.+.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 69999999999998863
No 414
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=20.20 E-value=1.4e+02 Score=28.48 Aligned_cols=18 Identities=22% Similarity=0.364 Sum_probs=16.0
Q ss_pred eEEEEeChhHHHHHHHHH
Q 018984 160 SFLFGQSLGGAVALKVHL 177 (348)
Q Consensus 160 v~l~GhS~Gg~~a~~~a~ 177 (348)
-++.|.|+||.++..+|.
T Consensus 68 d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 68 DVISGTSAGGINGVLLAY 85 (739)
T ss_pred ceEEeeCHHHHHHHHHHc
Confidence 479999999999988886
No 415
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi. Since they are not found in humans, they make a promising new target for antimicrobial drug development. Homoserine O-succinyltransferase (HST) is a representative from this class and has recently had the key amino acids involved in substrate specificity and catalysis elucidated [].; GO: 0016746 transferase activity, transferring acyl groups, 0019281 L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine, 0005737 cytoplasm; PDB: 2H2W_A 2GHR_A 2VDJ_A.
Probab=20.20 E-value=1.5e+02 Score=24.71 Aligned_cols=37 Identities=16% Similarity=0.041 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCCCeEEEEeChhHHHHHHHHHh
Q 018984 136 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 178 (348)
Q Consensus 136 ~~~~~d~~~~l~~l~~~~~~~~~~v~l~GhS~Gg~~a~~~a~~ 178 (348)
.++.+++.+++++.+.. ..--+.-|||++.|+..---
T Consensus 117 V~YW~El~~i~dwa~~~------v~stl~iCWgAqAaLy~~yG 153 (298)
T PF04204_consen 117 VDYWDELTEIFDWAKTH------VTSTLFICWGAQAALYHFYG 153 (298)
T ss_dssp STTHHHHHHHHHHHHHH------EEEEEEETHHHHHHHHHHH-
T ss_pred CCcHHHHHHHHHHHHHc------CCcchhhhHHHHHHHHHHcC
Confidence 34678999999999886 56788899999999987643
No 416
>PRK12828 short chain dehydrogenase; Provisional
Probab=20.13 E-value=1.5e+02 Score=23.16 Aligned_cols=31 Identities=26% Similarity=0.074 Sum_probs=22.4
Q ss_pred EEEEecCCCcccccchhHHHHHHhCCceEEeecC
Q 018984 86 VCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDY 119 (348)
Q Consensus 86 vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 119 (348)
.+++.|..+.-. ..+++.|.++|++|+.++.
T Consensus 9 ~vlItGatg~iG---~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGLG---RATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcHh---HHHHHHHHHCCCeEEEEeC
Confidence 466667654433 3577888889999999985
No 417
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=20.13 E-value=3.4e+02 Score=25.52 Aligned_cols=41 Identities=24% Similarity=0.206 Sum_probs=26.4
Q ss_pred ceeEEEEecCCCccccc--chhHHHHHHhCCceEEeecCCCCc
Q 018984 83 KGLVCYCHGYGDTCTFF--FEGTARKLASSGYGVFAMDYPGFG 123 (348)
Q Consensus 83 ~~~vv~~HG~~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G 123 (348)
+.+++++||.....-.. -..+...|..+|..|-.+-+|+-|
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~ 593 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEG 593 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCC
Confidence 56799999986443210 234667777778777666666543
No 418
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=20.02 E-value=1.9e+02 Score=22.76 Aligned_cols=35 Identities=20% Similarity=0.159 Sum_probs=23.7
Q ss_pred eeEEEEecCCCcccccchhHHHHHHhCCceEEeecCC
Q 018984 84 GLVCYCHGYGDTCTFFFEGTARKLASSGYGVFAMDYP 120 (348)
Q Consensus 84 ~~vv~~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 120 (348)
+.+|++-|-...+- -..++..|++.||.|++--.+
T Consensus 7 ~k~VlItgcs~GGI--G~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 7 PKKVLITGCSSGGI--GYALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCeEEEeecCCcch--hHHHHHHHHhCCeEEEEEccc
Confidence 34666666543322 246889999999999987654
No 419
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=20.02 E-value=3.7e+02 Score=19.89 Aligned_cols=60 Identities=17% Similarity=0.088 Sum_probs=37.8
Q ss_pred CccceeeEEecCCCceeEEEEeccCCCCCceeEEEEecCCCcccc-----cchhHHHHHHhCCceEEeec
Q 018984 54 GLKTEESYEVNSRGVEIFCKSWLPETSQPKGLVCYCHGYGDTCTF-----FFEGTARKLASSGYGVFAMD 118 (348)
Q Consensus 54 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~-----~~~~~~~~l~~~g~~vi~~D 118 (348)
|...+.......+|..+....+ ..+++||+...-..+... -|+...+.|.+.|..|+.+.
T Consensus 7 G~~aPdF~Lp~~~g~~v~Lsd~-----~Gk~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS 71 (157)
T COG1225 7 GDKAPDFELPDQDGETVSLSDL-----RGKPVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGIS 71 (157)
T ss_pred CCcCCCeEeecCCCCEEehHHh-----cCCcEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 3345566677778877665544 224677777765444321 25566677878899998764
Done!